BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046892
(519 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 221 bits (562), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 182/293 (62%), Gaps = 6/293 (2%)
Query: 65 QTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLV 123
+ F+ REL A+ NF + +LG GGFG+VYKG L ++G +VAVK+L QG + +F
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERXQGGELQFQT 84
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV M+S+ H NL+ L G+C +RLLVY +M+ GSV L + E++ PLDW R +I
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A G+A+GL YLHD +P +I+RD+K++NILL + + DFGLAKL + +V V
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX-HVXXAV 203
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPV--DEQNLIAWAQPI 301
GT G+ APEY +G+ + K+DV+ +GV+LLELITG+R D R D+ L+ W + +
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 302 FRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
++ K+ + D L+ + ++ + + + +A +C Q RP MS+VV L
Sbjct: 264 LKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 181/293 (61%), Gaps = 6/293 (2%)
Query: 65 QTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLV 123
+ F+ REL A+ NF + +LG GGFG+VYKG L ++G +VAVK+L QG + +F
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKRLKEERTQGGELQFQT 76
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV M+S+ H NL+ L G+C +RLLVY +M+ GSV L + E++ PLDW R +I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A G+A+GL YLHD +P +I+RD+K++NILL + + DFGLAKL + +V V
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX-HVXXAV 195
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPV--DEQNLIAWAQPI 301
G G+ APEY +G+ + K+DV+ +GV+LLELITG+R D R D+ L+ W + +
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 302 FRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
++ K+ + D L+ + ++ + + + +A +C Q RP MS+VV L
Sbjct: 256 LKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 165/285 (57%), Gaps = 5/285 (1%)
Query: 71 ELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSL 130
+L AT NF + L+G G FG+VYKG L+ +G VA+K+ QG +EF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 131 LHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQG 190
HP+LV+LIG+C + ++ +L+Y++M G++ HL + + W R++I GAA+G
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
L YLH +A +I+RD+KS NILL N PK++DFG++K G + ++ ++ V GT GY
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 251 APEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPD 310
PEY G LT KSDVYSFGV+L E++ R I + P + NL WA + +
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ-LEQ 267
Query: 311 MADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSF 355
+ DP L + + L + A CL + RP M DV+ L +
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 164/285 (57%), Gaps = 5/285 (1%)
Query: 71 ELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSL 130
+L AT NF + L+G G FG+VYKG L+ +G VA+K+ QG +EF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 131 LHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQG 190
HP+LV+LIG+C + ++ +L+Y++M G++ HL + + W R++I GAA+G
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
L YLH +A +I+RD+KS NILL N PK++DFG++K G + + ++ V GT GY
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 251 APEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPD 310
PEY G LT KSDVYSFGV+L E++ R I + P + NL WA + +
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ-LEQ 267
Query: 311 MADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSF 355
+ DP L + + L + A CL + RP M DV+ L +
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 172/315 (54%), Gaps = 20/315 (6%)
Query: 55 KQDETKNINAQTFTFRELAAATKNFRQECL------LGEGGFGRVYKGTLQSNGQVVAVK 108
K E + +F+F EL T NF + + +GEGGFG VYKG + N VAVK
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVK 60
Query: 109 QL----DRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDH 164
+L D + ++F E+ +++ H NLV L+G+ +DGD LVY +M GS+ D
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120
Query: 165 LLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSD 224
L ++ T PL W R KIA GAA G+ +LH+ + I+RD+KS+NILL K+SD
Sbjct: 121 LSCLDGTP-PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 225 FGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVID 284
FGLA+ + + + SR++GT Y APE R GE+T KSD+YSFGV+LLE+ITG +D
Sbjct: 177 FGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 285 TTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARP 344
R + Q L+ + I + K D D + + ++A+ CL E+ RP
Sbjct: 236 EHR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRP 292
Query: 345 LMSDVVTALSFLSNS 359
+ V L ++ S
Sbjct: 293 DIKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 171/315 (54%), Gaps = 20/315 (6%)
Query: 55 KQDETKNINAQTFTFRELAAATKNFRQECL------LGEGGFGRVYKGTLQSNGQVVAVK 108
K E + +F+F EL T NF + + +GEGGFG VYKG + N VAVK
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVK 60
Query: 109 QL----DRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDH 164
+L D + ++F E+ +++ H NLV L+G+ +DGD LVY +M GS+ D
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120
Query: 165 LLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSD 224
L ++ T PL W R KIA GAA G+ +LH+ + I+RD+KS+NILL K+SD
Sbjct: 121 LSCLDGTP-PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 225 FGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVID 284
FGLA+ + + + R++GT Y APE R GE+T KSD+YSFGV+LLE+ITG +D
Sbjct: 177 FGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 285 TTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARP 344
R + Q L+ + I + K D D + + ++A+ CL E+ RP
Sbjct: 236 EHR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRP 292
Query: 345 LMSDVVTALSFLSNS 359
+ V L ++ S
Sbjct: 293 DIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 20/305 (6%)
Query: 65 QTFTFRELAAATKNFRQECL------LGEGGFGRVYKGTLQSNGQVVAVKQL----DRNG 114
+F+F EL T NF + + +GEGGFG VYKG + N VAVK+L D
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITT 64
Query: 115 MQGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKP 174
+ ++F E+ +++ H NLV L+G+ +DGD LVY +M GS+ D L ++ T P
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-P 123
Query: 175 LDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG 234
L W R KIA GAA G+ +LH+ + I+RD+KS+NILL K+SDFGLA+ +
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 235 EKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNL 294
+ + R++GT Y APE R GE+T KSD+YSFGV+LLE+ITG +D R + Q L
Sbjct: 181 AQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 237
Query: 295 IAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
+ + I + K D D + + ++A+ CL E+ RP + V L
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
Query: 355 FLSNS 359
++ S
Sbjct: 297 EMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 160/295 (54%), Gaps = 20/295 (6%)
Query: 65 QTFTFRELAAATKNFRQECL------LGEGGFGRVYKGTLQSNGQVVAVKQL----DRNG 114
+F+F EL T NF + + GEGGFG VYKG + N VAVK+L D
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITT 61
Query: 115 MQGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKP 174
+ ++F E+ + + H NLV L+G+ +DGD LVY + GS+ D L ++ T P
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP-P 120
Query: 175 LDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG 234
L W R KIA GAA G+ +LH+ + I+RD+KS+NILL K+SDFGLA+ +
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 235 EKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNL 294
+ SR++GT Y APE R GE+T KSD+YSFGV+LLE+ITG +D R + Q L
Sbjct: 178 AQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 234
Query: 295 IAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDV 349
+ + I + K D D + ++A+ CL E+ RP + V
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 108/196 (55%), Gaps = 8/196 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK--EFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG V++ + +G VAVK L + EFL EV ++ L HPN+V +G
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+V E++S GS+ LL + ++ LD R+ +A A+G+ YLH++ NPP+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
++RDLKS N+L+ K+ DFGL++L + + GT + APE R
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 263 KSDVYSFGVILLELIT 278
KSDVYSFGVIL EL T
Sbjct: 219 KSDVYSFGVILWELAT 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 146/296 (49%), Gaps = 39/296 (13%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQL---DRNG----MQGNKEFLVEVLM 127
A E +G+GGFG V+KG L + VVA+K L D G ++ +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 128 LSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGA 187
+S L+HPN+V L G + + +V EF+ G + LLD P+ W+ ++++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDI 131
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILL-----GANLDPKLSDFGLAKLGPQGEKMNVTSR 242
A G+EY+ ++ NPP+++RDL+S NI L A + K++DFGL++ + ++ S
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSG 185
Query: 243 VMGTYGYCAPEY--ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQP 300
++G + + APE A T K+D YSF +IL ++TG P DE +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE------GPFDEYS------- 232
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFL 356
+ K + + LR PE + +C + RP S +V LS L
Sbjct: 233 -YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 108/196 (55%), Gaps = 8/196 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK--EFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG V++ + +G VAVK L + EFL EV ++ L HPN+V +G
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+V E++S GS+ LL + ++ LD R+ +A A+G+ YLH++ NPP+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
++R+LKS N+L+ K+ DFGL++L + + GT + APE R
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNE 218
Query: 263 KSDVYSFGVILLELIT 278
KSDVYSFGVIL EL T
Sbjct: 219 KSDVYSFGVILWELAT 234
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 145/296 (48%), Gaps = 39/296 (13%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQL---DRNG----MQGNKEFLVEVLM 127
A E +G+GGFG V+KG L + VVA+K L D G ++ +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 128 LSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGA 187
+S L+HPN+V L G + + +V EF+ G + LLD P+ W+ ++++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDI 131
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILL-----GANLDPKLSDFGLAKLGPQGEKMNVTSR 242
A G+EY+ ++ NPP+++RDL+S NI L A + K++DFG ++ + ++ S
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSG 185
Query: 243 VMGTYGYCAPEY--ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQP 300
++G + + APE A T K+D YSF +IL ++TG P DE +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE------GPFDEYS------- 232
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFL 356
+ K + + LR PE + +C + RP S +V LS L
Sbjct: 233 -YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 145/296 (48%), Gaps = 39/296 (13%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQL---DRNG----MQGNKEFLVEVLM 127
A E +G+GGFG V+KG L + VVA+K L D G ++ +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 128 LSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGA 187
+S L+HPN+V L G + + +V EF+ G + LLD P+ W+ ++++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDI 131
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILL-----GANLDPKLSDFGLAKLGPQGEKMNVTSR 242
A G+EY+ ++ NPP+++RDL+S NI L A + K++DF L++ + ++ S
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSG 185
Query: 243 VMGTYGYCAPEY--ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQP 300
++G + + APE A T K+D YSF +IL ++TG P DE +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE------GPFDEYS------- 232
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFL 356
+ K + + LR PE + +C + RP S +V LS L
Sbjct: 233 -YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 23/210 (10%)
Query: 82 ECLLGEGGFGRVYKGTLQSNGQVVAVKQL----DRNGMQGNKEFLVEVLMLSLLHHPNLV 137
E ++G GGFG+VY+ G VAVK D + Q + E + ++L HPN++
Sbjct: 12 EEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
L G C LV EF GG ++ L + + P D + A A+G+ YLHD+
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPD--ILVNWAVQIARGMNYLHDE 124
Query: 198 ANPPVIYRDLKSSNILLGANLD--------PKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
A P+I+RDLKSSNIL+ ++ K++DFGLA+ + KM+ G Y +
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA----GAYAW 180
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITG 279
APE R+ + SDV+S+GV+L EL+TG
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 21/201 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 135
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKL-------GPQGEKMNVTSRVMGTYGYCAPEYARS 257
RDL + N L+G N K++DFGL++L P G K + + APE
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK--------WTAPESLAY 187
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ ++KSDV++FGV+L E+ T
Sbjct: 188 NKFSIKSDVWAFGVLLWEIAT 208
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ + + +A+ + +EYL K I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 21/201 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKL-------GPQGEKMNVTSRVMGTYGYCAPEYARS 257
RDL + N L+G N K++DFGL++L P G K + + APE
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK--------WTAPESLAY 188
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ ++KSDV++FGV+L E+ T
Sbjct: 189 NKFSIKSDVWAFGVLLWEIAT 209
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 324
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L ET K L + +A+ A G+ Y+ +
Sbjct: 325 VQLYAVVSE-EPIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYV-E 380
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 381 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 435
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 436 ALYGRFTIKSDVWSFGILLTELTTKGRV 463
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 135
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L ET K L + +A+ A G+ Y+ +
Sbjct: 242 VQLYAVVSE-EPIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYV-E 297
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 298 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 352
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTTKGRV 380
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 138
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 198 DVWAFGVLLWEIAT 211
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L ET K L + +A+ A G+ Y+ +
Sbjct: 242 VQLYAVVSE-EPIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYV-E 297
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 298 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 352
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTTKGRV 380
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ + + +A+ + +EYL K I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 147
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 207 DVWAFGVLLWEIAT 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 68
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L ET K L + +A+ A G+ Y+ +
Sbjct: 69 VQLYAVVSE-EPIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYV-E 124
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 125 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 179
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 180 ALYGRFTIKSDVWSFGILLTELTTKGRV 207
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 65
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L ET K L + +A+ A G+ Y+ +
Sbjct: 66 VQLYAVVSE-EPIXIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYV-E 121
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 122 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEX---TARQGAKFPIKWTAPEA 176
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELTTKGRV 204
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 143/282 (50%), Gaps = 31/282 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ Q +V ++ G S+ HL + ETK + + IA AQG++YLH K+ +
Sbjct: 73 -STAPQLAIVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE--- 259
I+RDLKS+NI L +L K+ DFGLA + + + ++ G+ + APE R +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF--PDMADPLLR 317
+ +SDVY+FG++L EL+TG+ D Q IF + + PD++ +R
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRD--------QIIFMVGRGYLSPDLSK--VR 235
Query: 318 KQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
P K + + A CL+++ RPL ++ ++ L+ S
Sbjct: 236 SNCP-KAMKR---LMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ + + +A+ + +EYL K I+
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ + + +A+ + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ + + +A+ + +EYL K I+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 142/282 (50%), Gaps = 31/282 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
Q +V ++ G S+ HL + ETK + + IA AQG++YLH K+ +
Sbjct: 75 STK-PQLAIVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE--- 259
I+RDLKS+NI L +L K+ DFGLA + + + ++ G+ + APE R +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF--PDMADPLLR 317
+ +SDVY+FG++L EL+TG+ D Q IF + + PD++ +R
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPYSNINNRD--------QIIFMVGRGYLSPDLSK--VR 237
Query: 318 KQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
P K + + A CL+++ RPL ++ ++ L+ S
Sbjct: 238 SNCP-KAMKR---LMAECLKKKRDERPLFPQILASIELLARS 275
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ + + +A+ + +EYL K I+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 144/282 (51%), Gaps = 31/282 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
Q +V ++ G S+ HL + ETK + + IA AQG++YLH K+ +
Sbjct: 100 STK-PQLAIVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE--- 259
I+RDLKS+NI L +L K+ DFGLA + + + ++ G+ + APE R +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF--PDMADPLLR 317
+ +SDVY+FG++L EL+TG+ + N+ Q IF + + PD++ +R
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSK--VR 262
Query: 318 KQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
P K + + A CL+++ RPL ++ ++ L+ S
Sbjct: 263 SNCP-KAMKR---LMAECLKKKRDERPLFPQILASIELLARS 300
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ + + +A+ + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ + + +A+ + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RDL + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L ET K L + +A+ A G+ Y+ +
Sbjct: 242 VQLYAVVSE-EPIYIVGEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYV-E 297
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 298 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 352
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTTKGRV 380
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 142/282 (50%), Gaps = 31/282 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
Q +V ++ G S+ HL + ETK + + IA AQG++YLH K+ +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE--- 259
I+RDLKS+NI L +L K+ DFGLA + + + ++ G+ + APE R +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF--PDMADPLLR 317
+ +SDVY+FG++L EL+TG+ D Q IF + + PD++ +R
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRD--------QIIFMVGRGYLSPDLSK--VR 240
Query: 318 KQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
P K + + A CL+++ RPL ++ ++ L+ S
Sbjct: 241 SNCP-KAMKR---LMAECLKKKRDERPLFPQILASIELLARS 278
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 144/282 (51%), Gaps = 31/282 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
Q +V ++ G S+ HL + ETK + + IA AQG++YLH K+ +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE--- 259
I+RDLKS+NI L +L K+ DFGLA + + + ++ G+ + APE R +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF--PDMADPLLR 317
+ +SDVY+FG++L EL+TG+ + N+ Q IF + + PD++ +R
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSK--VR 263
Query: 318 KQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
P K + + A CL+++ RPL ++ ++ L+ S
Sbjct: 264 SNCP-KAMKR---LMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 142/282 (50%), Gaps = 31/282 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
Q +V ++ G S+ HL + ETK + + IA AQG++YLH K+ +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE--- 259
I+RDLKS+NI L +L K+ DFGLA + + + ++ G+ + APE R +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF--PDMADPLLR 317
+ +SDVY+FG++L EL+TG+ D Q IF + + PD++ +R
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRD--------QIIFMVGRGYLSPDLSK--VR 240
Query: 318 KQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
P K + + A CL+++ RPL ++ ++ L+ S
Sbjct: 241 SNCP-KAMKR---LMAECLKKKRDERPLFPQILASIELLARS 278
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 142/282 (50%), Gaps = 31/282 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
Q +V ++ G S+ HL + ETK + + IA AQG++YLH K+ +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE--- 259
I+RDLKS+NI L +L K+ DFGLA + + + ++ G+ + APE R +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF--PDMADPLLR 317
+ +SDVY+FG++L EL+TG+ D Q IF + + PD++ +R
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRD--------QIIFMVGRGYLSPDLSK--VR 235
Query: 318 KQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
P K + + A CL+++ RPL ++ ++ L+ S
Sbjct: 236 SNCP-KAMKR---LMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 380
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
R+L + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 440 DVWAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ ++ + +A+ + +EYL K I+
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 338
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
R+L + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 398 DVWAFGVLLWEIAT 411
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G +G VY+G + VAVK L + M+ +EFL E ++ + HPNLV L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ EFM+ G++ D+L + N ++ + + +A+ + +EYL K I+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 341
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
R+L + N L+G N K++DFGL++L G+ + + APE + ++KS
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 265 DVYSFGVILLELIT 278
DV++FGV+L E+ T
Sbjct: 401 DVWAFGVLLWEIAT 414
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 143/282 (50%), Gaps = 31/282 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
Q +V ++ G S+ HL + ETK + + IA AQG++YLH K+ +
Sbjct: 93 STK-PQLAIVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE--- 259
I+RDLKS+NI L +L K+ DFGLA + + ++ G+ + APE R +
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF--PDMADPLLR 317
+ +SDVY+FG++L EL+TG+ + N+ Q IF + + PD++ +R
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSK--VR 255
Query: 318 KQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
P K + + A CL+++ RPL ++ ++ L+ S
Sbjct: 256 SNCP-KAMKR---LMAECLKKKRDERPLFPQILASIELLARS 293
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L E K L + +A+ A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 186
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L E K L + +A+ A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEX---TARQGAKFPIKWTAPEA 186
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 143/282 (50%), Gaps = 31/282 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
Q +V ++ G S+ HL + ETK + + IA AQG++YLH K+ +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE--- 259
I+RDLKS+NI L +L K+ DFGLA + + ++ G+ + APE R +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF--PDMADPLLR 317
+ +SDVY+FG++L EL+TG+ + N+ Q IF + + PD++ +R
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSK--VR 263
Query: 318 KQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
P K + + A CL+++ RPL ++ ++ L+ S
Sbjct: 264 SNCP-KAMKR---LMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 136/280 (48%), Gaps = 27/280 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G G FG VYKG + V +K +D Q + F EV +L H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF-QAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
D +V ++ G S+ HL V ETK + + IA AQG++YLH K +I+
Sbjct: 103 K-DNLAIVTQWCEGSSLYKHL-HVQETKFQM--FQLIDIARQTAQGMDYLHAKN---IIH 155
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE---LT 261
RD+KS+NI L L K+ DFGLA + + + G+ + APE R + +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF--PDMADPLLRKQ 319
+SDVYS+G++L EL+TG D Q IF + + PD++ L K
Sbjct: 216 FQSDVYSYGIVLYELMTGELPYSHINNRD--------QIIFMVGRGYASPDLSK--LYKN 265
Query: 320 FPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
P K + VA ++EE RPL +++++ L +S
Sbjct: 266 CP-KAMKRLVADCVKKVKEE---RPLFPQILSSIELLQHS 301
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 66
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L E K L + +A+ A G+ Y+ +
Sbjct: 67 VQLYAVVSE-EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYV-E 122
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 123 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 177
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELTTKGRV 205
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 141/282 (50%), Gaps = 31/282 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
Q +V ++ G S+ HL + ETK + + IA AQG++YLH K+ +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE--- 259
I+RDLKS+NI L +L K+ DFGLA + + ++ G+ + APE R +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF--PDMADPLLR 317
+ +SDVY+FG++L EL+TG+ D Q IF + + PD++ +R
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRD--------QIIFMVGRGYLSPDLSK--VR 235
Query: 318 KQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
P K + + A CL+++ RPL ++ ++ L+ S
Sbjct: 236 SNCP-KAMKR---LMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 64
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L E K L + +A+ A G+ Y+ +
Sbjct: 65 VQLYAVVSE-EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYV-E 120
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 121 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 175
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 176 ALYGRFTIKSDVWSFGILLTELTTKGRV 203
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L E K L + +A+ A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 186
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L E K L + +A+ A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVCEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 186
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 117/208 (56%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 72
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+M+ GS+ D L ET K L + +++ A G+ Y+ +
Sbjct: 73 VQLYAVVSE-EPIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYV-E 128
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 129 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 183
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 117/208 (56%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 72
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+M+ GS+ D L ET K L + +++ A G+ Y+ +
Sbjct: 73 VQLYAVVSE-EPIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYV-E 128
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 129 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---WTARQGAKFPIKWTAPEA 183
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 85 LGEGGFGRV-----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LGEG FG+V Y + + +VAVK L + K+F E +L+ L H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 140 IGYCADGDQRLLVYEFMSGGSVD--------DHLLDVN----ETKKPLDWTTRMKIASGA 187
G C DGD ++V+E+M G ++ D ++ V+ + K L + + IAS
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY 247
A G+ YL A+ ++RDL + N L+GANL K+ DFG+++ + V M
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 248 GYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ PE + T +SDV+SFGVIL E+ T
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ + H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKIRHEKL 75
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L E K L + +A+ A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 186
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 115/208 (55%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L E K L + +A+ A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL ++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 132 RMN--YVHRDLAAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 186
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS G + D L E K L + +A+ A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVMEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 186
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS G + D L E K L + +A+ A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVTEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGLA+L E T+R + + APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA 186
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 112/200 (56%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ GT N +V A+K L + G + FL E ++ L H LV L +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKV-AIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ + +V E+M+ GS+ D L D + L + +A+ A G+ Y+ ++ N I+
Sbjct: 75 E-EPIYIVTEYMNKGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYI-ERMN--YIH 128
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+S+NIL+G L K++DFGLA+L E T+R + + APE A G T+
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEX---TARQGAKFPIKWTAPEAALYGRFTI 185
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L EL+T RV
Sbjct: 186 KSDVWSFGILLTELVTKGRV 205
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 15/227 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNLVNLIGYC 143
+G+G G VY + GQ VA++Q++ Q KE ++ E+L++ +PN+VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
GD+ +V E+++GGS+ D + T+ +D + Q LE+LH VI
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHSNQ---VI 138
Query: 204 YRDLKSSNILLGANLDPKLSDFGL-AKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
+RD+KS NILLG + KL+DFG A++ P+ K S ++GT + APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTRKAYGP 195
Query: 263 KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAW-AQPIFRDPKRF 308
K D++S G++ +E+I G P+ LIA P ++P++
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ R E LG+G FG V+ GT +V A+K L + G + FL E ++ L H L
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGNMSPEAFLQEAQVMKKLRHEKL 242
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L ++ + +V E+MS GS+ D L E K L + +A+ A G+ Y+ +
Sbjct: 243 VQLYAVVSE-EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYV-E 298
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ N ++RDL+++NIL+G NL K++DFGL +L E T+R + + APE
Sbjct: 299 RMN--YVHRDLRAANILVGENLVCKVADFGLGRLIEDNE---YTARQGAKFPIKWTAPEA 353
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
A G T+KSDV+SFG++L EL T RV
Sbjct: 354 ALYGRFTIKSDVWSFGILLTELTTKGRV 381
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 15/227 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNLVNLIGYC 143
+G+G G VY + GQ VA++Q++ Q KE ++ E+L++ +PN+VN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
GD+ +V E+++GGS+ D + T+ +D + Q LE+LH VI
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHSNQ---VI 139
Query: 204 YRDLKSSNILLGANLDPKLSDFGL-AKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
+RD+KS NILLG + KL+DFG A++ P+ K S ++GT + APE
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGP 196
Query: 263 KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAW-AQPIFRDPKRF 308
K D++S G++ +E+I G P+ LIA P ++P++
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 243
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 15/227 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNLVNLIGYC 143
+G+G G VY + GQ VA++Q++ Q KE ++ E+L++ +PN+VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
GD+ +V E+++GGS+ D + T+ +D + Q LE+LH VI
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHSNQ---VI 138
Query: 204 YRDLKSSNILLGANLDPKLSDFGL-AKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
+RD+KS NILLG + KL+DFG A++ P+ K S ++GT + APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGP 195
Query: 263 KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAW-AQPIFRDPKRF 308
K D++S G++ +E+I G P+ LIA P ++P++
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 15/227 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNLVNLIGYC 143
+G+G G VY + GQ VA++Q++ Q KE ++ E+L++ +PN+VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
GD+ +V E+++GGS+ D + T+ +D + Q LE+LH VI
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHSNQ---VI 138
Query: 204 YRDLKSSNILLGANLDPKLSDFGL-AKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
+RD+KS NILLG + KL+DFG A++ P+ K S ++GT + APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGP 195
Query: 263 KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAW-AQPIFRDPKRF 308
K D++S G++ +E+I G P+ LIA P ++P++
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 114/220 (51%), Gaps = 9/220 (4%)
Query: 59 TKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN 118
T+N+ Q+ E+ + + LG G +G VY G + VAVK L + M+
Sbjct: 16 TENLYFQSMDKWEMERTDITMKHK--LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-V 72
Query: 119 KEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWT 178
+EFL E ++ + HPNLV L+G C +V E+M G++ D+L + N ++ +
Sbjct: 73 EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECN--REEVTAV 130
Query: 179 TRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN 238
+ +A+ + +EYL K I+RDL + N L+G N K++DFGL++L G+
Sbjct: 131 VLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYT 186
Query: 239 VTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ + APE ++KSDV++FGV+L E+ T
Sbjct: 187 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 20/207 (9%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
+LG+G FG+ K T + G+V+ +K+L R + + FL EV ++ L HPN++ IG
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 144 ADGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
D+RL + E++ GG++ ++ +++ P W+ R+ A A G+ YLH +
Sbjct: 77 YK-DKRLNFITEYIKGGTLRG-IIKSMDSQYP--WSQRVSFAKDIASGMAYLHSMN---I 129
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKL------GPQG----EKMNVTSR--VMGTYGYC 250
I+RDL S N L+ N + ++DFGLA+L P+G +K + R V+G +
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 251 APEYARSGELTVKSDVYSFGVILLELI 277
APE K DV+SFG++L E+I
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 119/227 (52%), Gaps = 15/227 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNLVNLIGYC 143
+G+G G VY + GQ VA++Q++ Q KE ++ E+L++ +PN+VN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
GD+ +V E+++GGS+ D + T+ +D + Q LE+LH VI
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHSNQ---VI 139
Query: 204 YRDLKSSNILLGANLDPKLSDFGL-AKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
+R++KS NILLG + KL+DFG A++ P+ K S ++GT + APE
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGP 196
Query: 263 KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAW-AQPIFRDPKRF 308
K D++S G++ +E+I G P+ LIA P ++P++
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 243
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 131/284 (46%), Gaps = 34/284 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
K E ++G G FG V K ++ VA+KQ++ + K F+VE+ LS ++HPN+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESESER--KAFIVELRQLSRVNHPNI 64
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTR---MKIASGAAQGLEY 193
V L G C + LV E+ GGS L +V +PL + T M +QG+ Y
Sbjct: 65 VKLYGACLN--PVCLVMEYAEGGS----LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 194 LHDKANPPVIYRDLKSSNILLGAN-LDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
LH +I+RDLK N+LL A K+ DFG A + + G+ + AP
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAP 173
Query: 253 EYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMA 312
E + K DV+S+G+IL E+IT R +P DE P FR +
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRR------KPFDEI-----GGPAFRIMWAVHNGT 222
Query: 313 DPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFL 356
P L K P+ ++ C ++ RP M ++V ++ L
Sbjct: 223 RPPLIKNLPKP----IESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 131/284 (46%), Gaps = 34/284 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
K E ++G G FG V K ++ VA+KQ++ + K F+VE+ LS ++HPN+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESESER--KAFIVELRQLSRVNHPNI 63
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTR---MKIASGAAQGLEY 193
V L G C + LV E+ GGS L +V +PL + T M +QG+ Y
Sbjct: 64 VKLYGACLN--PVCLVMEYAEGGS----LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 194 LHDKANPPVIYRDLKSSNILLGAN-LDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
LH +I+RDLK N+LL A K+ DFG A + + G+ + AP
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAP 172
Query: 253 EYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMA 312
E + K DV+S+G+IL E+IT R +P DE P FR +
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRR------KPFDEI-----GGPAFRIMWAVHNGT 221
Query: 313 DPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFL 356
P L K P+ ++ C ++ RP M ++V ++ L
Sbjct: 222 RPPLIKNLPKP----IESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 133
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 134 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 191 SKFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 138
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 139 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 196 SKFSVASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 133 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 190 SKFSVASDVWSFGVVLYELFT 210
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 112/238 (47%), Gaps = 21/238 (8%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV---EVLMLSLL 131
+ ++F+ LG G FGRV+ + NG+ A+K L + + K+ E LMLS++
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 132 HHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGL 191
HP ++ + G D Q ++ +++ GG + L P+ A+ L
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV----AKFYAAEVCLAL 119
Query: 192 EYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
EYLH K +IYRDLK NILL N K++DFG AK P +VT + GT Y A
Sbjct: 120 EYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIA 171
Query: 252 PEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
PE + D +SFG+++ E++ G P + N + + I RFP
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLAG------YTPFYDSNTMKTYEKILNAELRFP 223
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 139
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 140 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 197 SKFSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 140
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 141 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 198 SKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ EF+ GS+ ++L + K+ +D ++ S +G+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 141
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 142 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 199 SKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 165
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 166 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 223 SKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ + E LG G FG V+ T + +V AVK + + G + FL E ++ L H L
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTM-KPGSMSVEAFLAEANVMKTLQHDKL 72
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L + ++ EFM+ GS+ D L +K+PL + ++ A+G+ ++
Sbjct: 73 VKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQ 129
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ I+RDL+++NIL+ A+L K++DFGLA++ E T+R + + APE
Sbjct: 130 RN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEA 183
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
G T+KSDV+SFG++L+E++T R+
Sbjct: 184 INFGSFTIKSDVWSFGILLMEIVTYGRI 211
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 109/201 (54%), Gaps = 15/201 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
Q +V ++ G S+ HL +ETK + + IA A+G++YLH K+ +
Sbjct: 77 STK-PQLAIVTQWCEGSSLYHHL-HASETK--FEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR---SGE 259
I+RDLKS+NI L + K+ DFGLA + + + ++ G+ + APE R S
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 260 LTVKSDVYSFGVILLELITGR 280
+ +SDVY+FG++L EL+TG+
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQ 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 153 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 153 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ + E LG G FG V+ T + +V AVK + + G + FL E ++ L H L
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTM-KPGSMSVEAFLAEANVMKTLQHDKL 245
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L + ++ EFM+ GS+ D L +K+PL + ++ A+G+ ++
Sbjct: 246 VKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQ 302
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
+ I+RDL+++NIL+ A+L K++DFGLA++ E T+R + + APE
Sbjct: 303 RN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEA 356
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRV 282
G T+KSDV+SFG++L+E++T R+
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGRI 384
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG+G FG+VYK + + A K +D + ++++VE+ +L+ HPN+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ EF +GG+VD +L E ++PL + + L YLHD +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHDNK---IIH 158
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY-----ARSGE 259
RDLK+ NIL + D KL+DFG++ + +GT + APE ++
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 260 LTVKSDVYSFGVILLEL 276
K+DV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG+G FG+VYK + + A K +D + ++++VE+ +L+ HPN+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ EF +GG+VD +L E ++PL + + L YLHD +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHDNK---IIH 158
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY-----ARSGE 259
RDLK+ NIL + D KL+DFG++ + +GT + APE ++
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 260 LTVKSDVYSFGVILLEL 276
K+DV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 111/206 (53%), Gaps = 19/206 (9%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNL 136
++ + E LG G FG V+ T + +V AVK + + G + FL E ++ L H L
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTM-KPGSMSVEAFLAEANVMKTLQHDKL 239
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
V L + ++ EFM+ GS+ D L +K+PL + ++ A+G+ ++
Sbjct: 240 VKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQ 296
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ I+RDL+++NIL+ A+L K++DFGLA++G + + APE
Sbjct: 297 RN---YIHRDLRAANILVSASLVCKIADFGLARVGAKF-----------PIKWTAPEAIN 342
Query: 257 SGELTVKSDVYSFGVILLELITGRRV 282
G T+KSDV+SFG++L+E++T R+
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTYGRI 368
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG+G FG+VYK + + A K +D + ++++VE+ +L+ HPN+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ EF +GG+VD +L E ++PL + + L YLHD +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHDNK---IIH 158
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY-----ARSGE 259
RDLK+ NIL + D KL+DFG++ + +GT + APE ++
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 260 LTVKSDVYSFGVILLEL 276
K+DV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LGEG FG+V+ + + +VAVK L ++F E +L++L H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKK-----------PLDWTTRMKIASGAA 188
G C +G L+V+E+M G ++ L K PL + +AS A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 189 QGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYG 248
G+ YL A ++RDL + N L+G L K+ DFG+++ + V R M
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 249 YCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ PE + T +SDV+SFGV+L E+ T
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 109/201 (54%), Gaps = 15/201 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ Q +V ++ G S+ HL +ETK + + IA A+G++YLH K+ +
Sbjct: 89 -STAPQLAIVTQWCEGSSLYHHL-HASETK--FEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR---SGE 259
I+RDLKS+NI L + K+ DFGLA + + ++ G+ + APE R S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 260 LTVKSDVYSFGVILLELITGR 280
+ +SDVY+FG++L EL+TG+
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ 222
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LGEG FG+V+ + + +VAVK L ++F E +L++L H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKK-----------PLDWTTRMKIASGAA 188
G C +G L+V+E+M G ++ L K PL + +AS A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 189 QGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYG 248
G+ YL A ++RDL + N L+G L K+ DFG+++ + V R M
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 249 YCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ PE + T +SDV+SFGV+L E+ T
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LGEG FG+V+ + + +VAVK L ++F E +L++L H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 140 IGYCADGDQRLLVYEFMSGGSV---------DDHLLDVNE--TKKPLDWTTRMKIASGAA 188
G C +G L+V+E+M G + D LL E PL + +AS A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 189 QGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYG 248
G+ YL A ++RDL + N L+G L K+ DFG+++ + V R M
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 249 YCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ PE + T +SDV+SFGV+L E+ T
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 15/201 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG VYKG + VAVK L+ Q + F EV +L H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
Q +V ++ G S+ HL +ETK + + IA A+G++YLH K+ +
Sbjct: 89 STK-PQLAIVTQWCEGSSLYHHL-HASETK--FEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR---SGE 259
I+RDLKS+NI L + K+ DFGLA + + ++ G+ + APE R S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 260 LTVKSDVYSFGVILLELITGR 280
+ +SDVY+FG++L EL+TG+
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ 222
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L + K+ +D ++ S +G+EYL K
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR 135
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+R+L + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 136 ---YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 193 SKFSVASDVWSFGVVLYELFT 213
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 102/201 (50%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G+VVAVK+L + + ++F E+ +L L H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 141 GYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G C +R L+ E++ GS+ D+L E +D ++ S +G+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER---IDHIKLLQYTSQICKGMEYLGTKR 137
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYARS 257
I+RDL + NIL+ K+ DFGL K+ PQ E V + APE
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +V SDV+SFGV+L EL T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 19/235 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPN 135
N+R + +G+G F +V G+ VAVK +D+ + ++ EV ++ +L+HPN
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
+V L LV E+ SGG V D+L+ K+ +I S ++Y H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS----AVQYCH 131
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
K +++RDLK+ N+LL +++ K++DFG + G K++ G+ Y APE
Sbjct: 132 QKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELF 185
Query: 256 RSGELT-VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ + + DV+S GVIL L++G + P D QNL + + R R P
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 234
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 19/235 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPN 135
N+R +G+G F +V G+ VAVK +D+ + + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
+V L LV E+ SGG V D+L+ K+ +I S ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA----VQYCH 130
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
K +++RDLK+ N+LL A+++ K++DFG + G K++ G+ Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELF 184
Query: 256 RSGELT-VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ + + DV+S GVIL L++G + P D QNL + + R R P
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 19/235 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPN 135
N+R +G+G F +V G+ VAVK +D+ + + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
+V L LV E+ SGG V D+L+ K+ +I S ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA----VQYCH 130
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
K +++RDLK+ N+LL A+++ K++DFG + G K++ G+ Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELF 184
Query: 256 RSGELT-VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ + + DV+S GVIL L++G + P D QNL + + R R P
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 86
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 87 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 140
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 197
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 198 KSDVWSFGILLTEIVTHGRI 217
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 84
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 85 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 138
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 195
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 196 KSDVWSFGILLTEIVTHGRI 215
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 87
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 88 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 141
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 198
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 199 KSDVWSFGILLTEIVTHGRI 218
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 83
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 84 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 137
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTI 194
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 195 KSDVWSFGILLTEIVTHGRI 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 84
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 85 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 138
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 196 KSDVWSFGILLTEIVTHGRI 215
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 88
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 89 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 142
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTI 199
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 200 KSDVWSFGILLTEIVTHGRI 219
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 132
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 189
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 190 KSDVWSFGILLTEIVTHGRI 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 80
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 81 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 134
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 191
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 192 KSDVWSFGILLTEIVTHGRI 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 132
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 189
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 190 KSDVWSFGILLTEIVTHGRI 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 116/235 (49%), Gaps = 19/235 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPN 135
N+R +G+G F +V G+ VAVK +D+ + + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
+V L LV E+ SGG V D+L+ K+ +I S ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA----VQYCH 130
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
K +++RDLK+ N+LL A+++ K++DFG + G K++ G Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC---GAPPYAAPELF 184
Query: 256 RSGELT-VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ + + DV+S GVIL L++G + P D QNL + + R R P
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 79
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 80 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 133
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 190
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 191 KSDVWSFGILLTEIVTHGRI 210
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 11/227 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LGEG +G VYK + GQ+VA+KQ+ +E + E+ ++ P++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+V E+ GSV D + N+T + T I +GLEYLH I+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT---ILQSTLKGLEYLHFMRK---IH 148
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RD+K+ NILL KL+DFG+A G + M + V+GT + APE + +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 265 DVYSFGVILLELITGRRVIDTTRPVDEQNLIAW-AQPIFRDPKRFPD 310
D++S G+ +E+ G+ P+ +I P FR P+ + D
Sbjct: 207 DIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSD 253
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 132
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 190 KSDVWSFGILLTEIVTHGRI 209
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 117/235 (49%), Gaps = 19/235 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPN 135
N+R +G+G F +V G+ VAV+ +D+ + + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
+V L LV E+ SGG V D+L+ K+ +I S ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA----VQYCH 130
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
K +++RDLK+ N+LL A+++ K++DFG + G K++ G+ Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELF 184
Query: 256 RSGELT-VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ + + DV+S GVIL L++G + P D QNL + + R R P
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 106/201 (52%), Gaps = 17/201 (8%)
Query: 84 LLGE-GGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
++GE G FG+VYK + + A K +D + ++++VE+ +L+ HPN+V L+
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ ++ EF +GG+VD +L E ++PL + + L YLHD +
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHDNK---I 129
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSR--VMGTYGYCAPEY-----A 255
I+RDLK+ NIL + D KL+DFG++ + + + R +GT + APE +
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAPEVVMCETS 186
Query: 256 RSGELTVKSDVYSFGVILLEL 276
+ K+DV+S G+ L+E+
Sbjct: 187 KDRPYDYKADVWSLGITLIEM 207
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 73
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 74 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 127
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTI 184
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 185 KSDVWSFGILLTEIVTHGRI 204
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LGEG FG+V+ + + +VAVK L K+F E +L+ L H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHL-------LDVNETKKPLDWTTR--MKIASGAAQG 190
G C +GD ++V+E+M G ++ L + + E P + T + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
+ YL A+ ++RDL + N L+G NL K+ DFG+++ + V M +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 251 APEYARSGELTVKSDVYSFGVILLELIT 278
PE + T +SDV+S GV+L E+ T
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 117/235 (49%), Gaps = 19/235 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPN 135
N+R +G+G F +V G+ VAV+ +D+ + + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
+V L LV E+ SGG V D+L+ K+ +I S ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA----VQYCH 130
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
K +++RDLK+ N+LL A+++ K++DFG + G K++ G+ Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD---EFCGSPPYAAPELF 184
Query: 256 RSGELT-VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ + + DV+S GVIL L++G + P D QNL + + R R P
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 133/279 (47%), Gaps = 22/279 (7%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRN-GMQGNKEFLVEVLMLSLLHHPNLVNL 139
LGEG FG+V Y T G++VAVK L + G Q + E+ +L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 140 IGYCAD-GDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
G C D G++ L LV E++ GS+ D+L + + + A +G+ YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYAR 256
I+R+L + N+LL + K+ DFGLAK P+G E V + APE +
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 257 SGELTVKSDVYSFGVILLELITGRRVIDTTR--PVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ SDV+SFGV L EL+T D+++ P LI AQ R ++ +
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQGQM-TVLRLTELLER 249
Query: 315 LLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTAL 353
R P+K E + C + EA RP +++ L
Sbjct: 250 GERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 19/235 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPN 135
N+R +G+G F +V G+ VAVK +D+ + + ++ EV ++ +L+HPN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
+V L LV E+ SGG V D+L+ K+ +I S ++Y H
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSA----VQYCH 123
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
K +++RDLK+ N+LL A+++ K++DFG + G K++ G+ Y APE
Sbjct: 124 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELF 177
Query: 256 RSGELT-VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ + + DV+S GVIL L++G + P D QNL + + R R P
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 226
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 19/235 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPN 135
N+R +G+G F +V G+ VA+K +D+ + ++ EV ++ +L+HPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
+V L L+ E+ SGG V D+L+ K+ + +I S ++Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA----VQYCH 128
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
K +++RDLK+ N+LL A+++ K++DFG + G K++ G+ Y APE
Sbjct: 129 QKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELF 182
Query: 256 RSGELT-VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ + + DV+S GVIL L++G + P D QNL + + R R P
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 231
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 133/279 (47%), Gaps = 22/279 (7%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRN-GMQGNKEFLVEVLMLSLLHHPNLVNL 139
LGEG FG+V Y T G++VAVK L + G Q + E+ +L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 140 IGYCAD-GDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
G C D G++ L LV E++ GS+ D+L + + + A +G+ YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYAR 256
I+R+L + N+LL + K+ DFGLAK P+G E V + APE +
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 257 SGELTVKSDVYSFGVILLELITGRRVIDTTR--PVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ SDV+SFGV L EL+T D+++ P LI AQ R ++ +
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQGQM-TVLRLTELLER 249
Query: 315 LLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTAL 353
R P+K E + C + EA RP +++ L
Sbjct: 250 GERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 19/235 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPN 135
N+R +G+G F +V G+ VA+K +D+ + ++ EV ++ +L+HPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
+V L L+ E+ SGG V D+L+ K+ + +I S ++Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA----VQYCH 131
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
K +++RDLK+ N+LL A+++ K++DFG + G K++ G Y APE
Sbjct: 132 QKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC---GAPPYAAPELF 185
Query: 256 RSGELT-VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ + + DV+S GVIL L++G + P D QNL + + R R P
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 234
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
+G G FG VY N +VVA+K++ +G Q N+++ + EV L L HPN + G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
LV E+ G + D LL+V+ KKPL + GA QGL YLH
Sbjct: 83 CYLREHTAWLVMEYCLGSASD--LLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN--- 135
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARS---G 258
+I+RD+K+ NILL KL DFG A + M + +GT + APE + G
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANXFVGTPYWMAPEVILAMDEG 189
Query: 259 ELTVKSDVYSFGVILLEL 276
+ K DV+S G+ +EL
Sbjct: 190 QYDGKVDVWSLGITCIEL 207
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
+G G FG VY N +VVA+K++ +G Q N+++ + EV L L HPN + G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
LV E+ G + D LL+V+ KKPL + GA QGL YLH
Sbjct: 122 CYLREHTAWLVMEYCLGSASD--LLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN--- 174
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARS---G 258
+I+RD+K+ NILL KL DFG A + M + +GT + APE + G
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANXFVGTPYWMAPEVILAMDEG 228
Query: 259 ELTVKSDVYSFGVILLEL 276
+ K DV+S G+ +EL
Sbjct: 229 QYDGKVDVWSLGITCIEL 246
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 31/291 (10%)
Query: 83 CLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE---FLVEVLMLSLLHHPNLVNL 139
C+LG+G FG V K + Q AVK +++ + NK+ L EV +L L HPN++ L
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKL 86
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
D +V E +GG + D ++ +K +I G+ Y+H K N
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMH-KHN 141
Query: 200 PPVIYRDLKSSNILLGA---NLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+++RDLK NILL + + D K+ DFGL+ Q KM R+ GT Y APE R
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--DRI-GTAYYIAPEVLR 196
Query: 257 SGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPD 310
G K DV+S GVIL L++ G+ D + V E A+ P +R D
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV-ETGKYAFDLPQWR---TISD 251
Query: 311 MADPLLRKQF---PEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSN 358
A L+RK P + + +Q+ + P +SD+ + S ++N
Sbjct: 252 DAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTN 302
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 131/279 (46%), Gaps = 22/279 (7%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRN-GMQGNKEFLVEVLMLSLLHHPNLVNL 139
LGEG FG+V Y T G++VAVK L + G Q + E+ +L L+H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 140 IGYCAD-GDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
G C D G L LV E++ GS+ D+L + + + A +G+ YLH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYAR 256
I+RDL + N+LL + K+ DFGLAK P+G E V + APE +
Sbjct: 154 H---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 257 SGELTVKSDVYSFGVILLELITGRRVIDTTR--PVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ SDV+SFGV L EL+T D+++ P LI AQ R ++ +
Sbjct: 211 EYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQGQM-TVLRLTELLER 266
Query: 315 LLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTAL 353
R P+K E + C + EA RP +++ L
Sbjct: 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPIL 305
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 20/282 (7%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNL 136
++ + ++G G V + VA+K+++ Q + E L E+ +S HHPN+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDD---HLLDVNETKK-PLDWTTRMKIASGAAQGLE 192
V+ D+ LV + +SGGSV D H++ E K LD +T I +GLE
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN---VTSRVMGTYGY 249
YLH I+RD+K+ NILLG + +++DFG++ G + V +GT +
Sbjct: 136 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 250 CAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF 308
APE K+D++SFG+ +EL TG P+ L P
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-------- 244
Query: 309 PDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVV 350
P + + K+ +K + ++CLQ++ RP ++++
Sbjct: 245 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 19/235 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPN 135
N+R +G+G F +V G+ VAVK +D+ + + ++ EV + +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
+V L LV E+ SGG V D+L+ K+ +I S ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSA----VQYCH 130
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
K +++RDLK+ N+LL A+ + K++DFG + G K++ G Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELF 184
Query: 256 RSGELT-VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ + + DV+S GVIL L++G + P D QNL + + R R P
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 74
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 75 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 128
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
R+L+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTI 185
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 186 KSDVWSFGILLTEIVTHGRI 205
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 20/282 (7%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNL 136
++ + ++G G V + VA+K+++ Q + E L E+ +S HHPN+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDD---HLLDVNETKK-PLDWTTRMKIASGAAQGLE 192
V+ D+ LV + +SGGSV D H++ E K LD +T I +GLE
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN---VTSRVMGTYGY 249
YLH I+RD+K+ NILLG + +++DFG++ G + V +GT +
Sbjct: 131 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 250 CAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF 308
APE K+D++SFG+ +EL TG P+ L + DP
Sbjct: 188 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-----LQNDP--- 239
Query: 309 PDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVV 350
P + + K+ +K + ++CLQ++ RP ++++
Sbjct: 240 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 24/265 (9%)
Query: 71 ELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLM 127
++ ++F +LG+G FG+V+ + Q A+K L ++ + + + +VE +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 128 LSL-LHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG 186
LSL HP L ++ + V E+++GG + H+ ++ D + A+
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAE 127
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
GL++LH K ++YRDLK NILL + K++DFG+ K G+ T+ GT
Sbjct: 128 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGT 182
Query: 247 YGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNL---IAWAQPIFR 303
Y APE + D +SFGV+L E++ G+ DE+ L I P +
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ---DEEELFHSIRMDNPFY- 238
Query: 304 DPKRFPDMADPLLRKQF---PEKGL 325
P+ A LL K F PEK L
Sbjct: 239 -PRWLEKEAKDLLVKLFVREPEKRL 262
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 13/200 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G G V+ G + +V AVK L + M + FL E ++ L H LV L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKV-AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M GS+ D L + K ++ + +A+ A+G+ ++ ++ I+
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIH 132
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++NIL+ L K++DFGLA+L E T+R + + APE G T+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEX---TAREGAKFPIKWTAPEAINYGTFTI 189
Query: 263 KSDVYSFGVILLELITGRRV 282
KSDV+SFG++L E++T R+
Sbjct: 190 KSDVWSFGILLTEIVTHGRI 209
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 129/262 (49%), Gaps = 28/262 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G +N VAVK L + G + FL E ++ L H LV L
Sbjct: 21 LGAGQFGEVWMG-YYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ E+M+ GS+ D L +E K L + ++ A+G+ Y+ K I+
Sbjct: 79 REEPIYIITEYMAKGSLLD-FLKSDEGGKVLL-PKLIDFSAQIAEGMAYIERKN---YIH 133
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++N+L+ +L K++DFGLA++ E T+R + + APE G T+
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGCFTI 190
Query: 263 KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPE 322
KSDV+SFG++L E++T ++ R + + A +Q +R P+ E
Sbjct: 191 KSDVWSFGILLYEIVTYGKIPYPGR-TNADVMTALSQG-YRMPR--------------VE 234
Query: 323 KGLNEAVAIAAMCLQEEAGARP 344
+E I MC +E+A RP
Sbjct: 235 NCPDELYDIMKMCWKEKAEERP 256
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 28/262 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V+ G +N VAVK L + G + FL E ++ L H LV L
Sbjct: 20 LGAGQFGEVWMG-YYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+ ++ EFM+ GS+ D L +E K L + ++ A+G+ Y+ K I+
Sbjct: 78 KEEPIYIITEFMAKGSLLD-FLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKN---YIH 132
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL+++N+L+ +L K++DFGLA++ E T+R + + APE G T+
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGCFTI 189
Query: 263 KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPE 322
KS+V+SFG++L E++T ++ R + + A +Q R P M E
Sbjct: 190 KSNVWSFGILLYEIVTYGKIPYPGR-TNADVMSALSQGY-----RMPRM----------E 233
Query: 323 KGLNEAVAIAAMCLQEEAGARP 344
+E I MC +E+A RP
Sbjct: 234 NCPDELYDIMKMCWKEKAEERP 255
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 107/200 (53%), Gaps = 19/200 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIG-YC 143
LG+G FG+VYK + G + A K ++ + ++++VE+ +L+ HP +V L+G Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNE--TKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
DG +++ EF GG+VD +L+++ T+ + R + + L +LH K
Sbjct: 87 HDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSKR--- 137
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA-----R 256
+I+RDLK+ N+L+ D +L+DFG++ + + +GT + APE +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 257 SGELTVKSDVYSFGVILLEL 276
K+D++S G+ L+E+
Sbjct: 196 DTPYDYKADIWSLGITLIEM 215
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G++YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKYL-- 148
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 248
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 249 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 28/276 (10%)
Query: 84 LLGEGGFGRVYKGTLQ-SNGQV---VAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNLVN 138
++G G FG VYKG L+ S+G+ VA+K L + + +FL E ++ H N++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
L G + +++ E+M G++D L + + L ++ G A G++YL A
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYL---A 164
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAPEYARS 257
N ++RDL + NIL+ +NL K+SDFGL++ L E TS + APE
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 258 GELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
+ T SDV+SFG+++ E++T RP E + + I D R P
Sbjct: 225 RKFTSASDVWSFGIVMWEVMT-----YGERPYWELSNHEVMKAI-NDGFRLPT------- 271
Query: 318 KQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTAL 353
P + + C Q+E RP +D+V+ L
Sbjct: 272 ---PMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 107/200 (53%), Gaps = 19/200 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIG-YC 143
LG+G FG+VYK + G + A K ++ + ++++VE+ +L+ HP +V L+G Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNE--TKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
DG +++ EF GG+VD +L+++ T+ + R + + L +LH K
Sbjct: 79 HDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSKR--- 129
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA-----R 256
+I+RDLK+ N+L+ D +L+DFG++ + + +GT + APE +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 257 SGELTVKSDVYSFGVILLEL 276
K+D++S G+ L+E+
Sbjct: 188 DTPYDYKADIWSLGITLIEM 207
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G++YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKYL-- 148
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 248
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 249 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 42/305 (13%)
Query: 67 FTFRELAAATKNFRQEC---------LLGEGGFGRVYKGTLQSNGQ---VVAVKQLDRNG 114
FTF + A + F +E ++G G FG V G L+ G+ VA+K L
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 115 MQGNK-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKK 173
+ + +FL E ++ HPN+++L G +++ EFM GS+D L +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDG 130
Query: 174 PLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQ 233
+ + G A G++YL D ++RDL + NIL+ +NL K+SDFGL++
Sbjct: 131 QFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 234 GEKMNVTSRVMG---TYGYCAPEYARSGELTVKSDVYSFGVILLELIT--GRRVIDTTRP 288
+ +G + APE + + T SDV+S+G+++ E+++ R D T
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT-- 245
Query: 289 VDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSD 348
Q++I + +R P P M P Q + C Q++ RP
Sbjct: 246 --NQDVINAIEQDYRLP---PPMDCPSALHQ-----------LMLDCWQKDRNHRPKFGQ 289
Query: 349 VVTAL 353
+V L
Sbjct: 290 IVNTL 294
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G++YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKYL-- 149
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 249
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 250 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 24/265 (9%)
Query: 71 ELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLM 127
++ ++F +LG+G FG+V+ + Q A+K L ++ + + + +VE +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 128 LSL-LHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG 186
LSL HP L ++ + V E+++GG + H+ ++ D + A+
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAE 126
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
GL++LH K ++YRDLK NILL + K++DFG+ K G+ T+ GT
Sbjct: 127 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGT 181
Query: 247 YGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNL---IAWAQPIFR 303
Y APE + D +SFGV+L E++ G+ DE+ L I P +
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ---DEEELFHSIRMDNPFY- 237
Query: 304 DPKRFPDMADPLLRKQF---PEKGL 325
P+ A LL K F PEK L
Sbjct: 238 -PRWLEKEAKDLLVKLFVREPEKRL 261
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNL---- 139
LG GGFG V + Q G+ VA+KQ + N+E + +E+ ++ L+HPN+V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 140 --IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
+ A D LL E+ GG + +L + R + S + L YLH+
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISSALRYLHEN 140
Query: 198 ANPPVIYRDLKSSNILLG---ANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
+I+RDLK NI+L L K+ D G AK QGE + + +GT Y APE
Sbjct: 141 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPEL 194
Query: 255 ARSGELTVKSDVYSFGVILLELITGRR 281
+ TV D +SFG + E ITG R
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G++YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKYL-- 149
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 249
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 250 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G++YL
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKYL-- 141
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 241
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 242 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 284
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNL---- 139
LG GGFG V + Q G+ VA+KQ + N+E + +E+ ++ L+HPN+V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 140 --IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
+ A D LL E+ GG + +L + R + S + L YLH+
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISSALRYLHEN 141
Query: 198 ANPPVIYRDLKSSNILLG---ANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
+I+RDLK NI+L L K+ D G AK QGE + + +GT Y APE
Sbjct: 142 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPEL 195
Query: 255 ARSGELTVKSDVYSFGVILLELITGRR 281
+ TV D +SFG + E ITG R
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G++YL
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKYL-- 144
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 244
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 245 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G++YL
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKYL-- 147
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 247
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 248 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G++YL
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKYL-- 168
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 268
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 269 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 311
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 114/250 (45%), Gaps = 19/250 (7%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-----EVLMLSLL 131
++F+ LLG+G F VY+ G VA+K +D+ M K +V EV + L
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY--KAGMVQRVQNEVKIHCQL 68
Query: 132 HHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGL 191
HP+++ L Y D + LV E G ++ +L KP G+
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGM 125
Query: 192 EYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
YLH +++RDL SN+LL N++ K++DFGLA + + T + GT Y +
Sbjct: 126 LYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYIS 180
Query: 252 PEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWA---QPIFRDPKRF 308
PE A ++SDV+S G + L+ GR DT + N + A P F +
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEA- 239
Query: 309 PDMADPLLRK 318
D+ LLR+
Sbjct: 240 KDLIHQLLRR 249
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 7/195 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNLVNLIGYC 143
+G G FG V+ G L+++ +VAVK K +FL E +L HPN+V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+V E + GG D L + L T +++ AA G+EYL K I
Sbjct: 182 TQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RDL + N L+ K+SDFG+++ G + APE G + +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 264 SDVYSFGVILLELIT 278
SDV+SFG++L E +
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 38/305 (12%)
Query: 67 FTFRELAAATKNFRQE----CL-----LGEGGFGRVYKGTLQSNGQ---VVAVKQLDRNG 114
FTF + A + F +E C+ +G G FG V G L+ G+ VA+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 115 M-QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKK 173
+ ++FL E ++ HPN+++L G +++ E+M GS+ D L N+ +
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRF 128
Query: 174 PLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQ 233
+ + + G G++YL D + ++RDL + NIL+ +NL K+SDFG++++
Sbjct: 129 TV--IQLVGMLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 234 GEKMNVTSRVMGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVIDTTRPVDE 291
+ T+R + APE + T SDV+S+G+++ E+++ G R +
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER---PYWDMSN 240
Query: 292 QNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVT 351
Q++I + +R P P M P+ Q + C Q+E RP +V
Sbjct: 241 QDVIKAIEEGYRLP---PPMDCPIALHQ-----------LMLDCWQKERSDRPKFGQIVN 286
Query: 352 ALSFL 356
L L
Sbjct: 287 MLDKL 291
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G++YL
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKYL-- 146
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 246
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 247 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 289
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G++YL
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKYL-- 167
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 267
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 268 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 310
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 83 CLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE---FLVEVLMLSLLHHPNLVNL 139
C+LG+G FG V K + Q AVK +++ + NK+ L EV +L L HPN++ L
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKL 86
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
D +V E +GG + D ++ +K +I G+ Y+H K N
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMH-KHN 141
Query: 200 PPVIYRDLKSSNILLGA---NLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+++RDLK NILL + + D K+ DFGL+ Q KM R+ GT Y APE R
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--DRI-GTAYYIAPEVLR 196
Query: 257 SGELTVKSDVYSFGVILLELITG 279
G K DV+S GVIL L++G
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSG 218
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 7/195 (3%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNLVNLIGYC 143
+G G FG V+ G L+++ +VAVK K +FL E +L HPN+V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+V E + GG D L + L T +++ AA G+EYL K I
Sbjct: 182 TQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RDL + N L+ K+SDFG+++ G + APE G + +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 264 SDVYSFGVILLELIT 278
SDV+SFG++L E +
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 83 CLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE---FLVEVLMLSLLHHPNLVNL 139
C+LG+G FG V K + Q AVK +++ + NK+ L EV +L L HPN++ L
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKL 86
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
D +V E +GG + D ++ +K +I G+ Y+H K N
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMH-KHN 141
Query: 200 PPVIYRDLKSSNILLGA---NLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+++RDLK NILL + + D K+ DFGL+ Q KM R+ GT Y APE R
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--DRI-GTAYYIAPEVLR 196
Query: 257 SGELTVKSDVYSFGVILLELITG 279
G K DV+S GVIL L++G
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSG 218
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
F QE +G G FG V+ G N VA+K + R G ++F+ E ++ L HP LV
Sbjct: 10 TFVQE--IGSGQFGLVHLGYWL-NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWT-TRMKIASGAAQGLEYLHD 196
L G C + LV+EFM G + D+L T++ L T + + +G+ YL +
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ VI+RDL + N L+G N K+SDFG+ + + + T + +PE
Sbjct: 122 AS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 177
Query: 257 SGELTVKSDVYSFGVILLELITGRRV 282
+ KSDV+SFGV++ E+ + ++
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 13/206 (6%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
F QE +G G FG V+ G N VA+K + R G ++F+ E ++ L HP LV
Sbjct: 10 TFVQE--IGSGQFGLVHLGYWL-NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWT-TRMKIASGAAQGLEYLHD 196
L G C + LV+EFM G + D+L T++ L T + + +G+ YL +
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
VI+RDL + N L+G N K+SDFG+ + + + T + +PE
Sbjct: 122 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 177
Query: 257 SGELTVKSDVYSFGVILLELITGRRV 282
+ KSDV+SFGV++ E+ + ++
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 13/206 (6%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
F QE +G G FG V+ G N VA+K + R G ++F+ E ++ L HP LV
Sbjct: 8 TFVQE--IGSGQFGLVHLGYWL-NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWT-TRMKIASGAAQGLEYLHD 196
L G C + LV+EFM G + D+L T++ L T + + +G+ YL +
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
VI+RDL + N L+G N K+SDFG+ + + + T + +PE
Sbjct: 120 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 175
Query: 257 SGELTVKSDVYSFGVILLELITGRRV 282
+ KSDV+SFGV++ E+ + ++
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKI 201
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 22/215 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK---EFLVEVLMLSLLHHPNLVNLIG 141
LG G FG+V G + G VAVK L+R ++ + E+ L L HP+++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
+ +V E++SGG + D++ LD ++ G++Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGR----LDEKESRRLFQQILSGVDYCHRHM--- 136
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
V++RDLK N+LL A+++ K++DFGL+ + GE + + G+ Y APE SG L
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEVI-SGRLY 192
Query: 262 V--KSDVYSFGVILLELITGRRVIDTTRPVDEQNL 294
+ D++S GVIL L+ G T P D+ ++
Sbjct: 193 AGPEVDIWSSGVILYALLCG------TLPFDDDHV 221
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 13/206 (6%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
F QE +G G FG V+ G N VA+K + R G ++F+ E ++ L HP LV
Sbjct: 13 TFVQE--IGSGQFGLVHLGYWL-NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 68
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWT-TRMKIASGAAQGLEYLHD 196
L G C + LV+EFM G + D+L T++ L T + + +G+ YL +
Sbjct: 69 QLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEE 124
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
VI+RDL + N L+G N K+SDFG+ + + + T + +PE
Sbjct: 125 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 180
Query: 257 SGELTVKSDVYSFGVILLELITGRRV 282
+ KSDV+SFGV++ E+ + ++
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFSEGKI 206
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 23/228 (10%)
Query: 69 FRELAAATKNFRQECLLGEGGFGRVYKGTL-----QSNGQVVAVKQL-DRNGMQGNKEFL 122
+E++ + F +E LGE FG+VYKG L Q VA+K L D+ +EF
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 123 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLL------DVNET----- 171
E ++ + L HPN+V L+G +++ + S G + + L+ DV T
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 172 -KKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKL 230
K L+ + + + A G+EYL ++ V+++DL + N+L+ L+ K+SD GL +
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 231 GPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ + + + APE G+ ++ SD++S+GV+L E+ +
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQ---VVAVKQLDRNGMQGNK-EFLVEV 125
+EL A+ + E ++G G FG V G L+ G+ VA+K L + + +FL E
Sbjct: 38 KELDASC--IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEA 95
Query: 126 LMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIAS 185
++ HPN+V+L G G ++V EFM G++D L + + ++
Sbjct: 96 SIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR--- 152
Query: 186 GAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVM 244
G A G+ YL D ++RDL + NIL+ +NL K+SDFGL++ + E + T+
Sbjct: 153 GIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 245 GTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE + + T SDV+S+G+++ E+++
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 12/200 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVV----AVKQLDRN-GMQGNKEFLVEVLMLSLLHHPNLVN 138
+LG G FG VYKG G+ V A+K L+ G + N EF+ E L+++ + HP+LV
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
L+G C + LV + M G + ++ V+E K + + A+G+ YL ++
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEY---VHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 137
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
+++RDL + N+L+ + K++DFGLA+L EK + A E
Sbjct: 138 ---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 194
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ T +SDV+S+GV + EL+T
Sbjct: 195 KFTHQSDVWSYGVTIWELMT 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 33/281 (11%)
Query: 82 ECLLGEGGFGRVYKGTLQSNGQ---VVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNL 136
E ++G G FG V +G L++ G+ VA+K L + G + +EFL E ++ HPN+
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ L G + +++ EFM G++D L +N+ + + + + G A G+ YL +
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDS-FLRLNDGQFTV--IQLVGMLRGIASGMRYLAE 136
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMG---TYGYCAPE 253
+ ++RDL + NIL+ +NL K+SDFGL++ + + +G + APE
Sbjct: 137 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 254 YARSGELTVKSDVYSFGVILLELIT-GRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMA 312
+ T SD +S+G+++ E+++ G R + Q++I + +R P PD
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGER---PYWDMSNQDVINAIEQDYRLPPP-PDCP 249
Query: 313 DPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTAL 353
L + C Q++ ARP VV+AL
Sbjct: 250 TSLHQLMLD-------------CWQKDRNARPRFPQVVSAL 277
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 126/277 (45%), Gaps = 28/277 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNLVNLIGYC 143
+G+G FG V+KG +VVA+K +D + E + E+ +LS P + G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+ ++ E++ GGS D L PLD T I +GL+YLH + I
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHSEKK---I 141
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K++N+LL + + KL+DFG+A G + + +GT + APE + K
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 264 SDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEK 323
+D++S G+ +EL G P+ + +F PK P P L + K
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHPM---------KVLFLIPKNNP----PTLEGNY-SK 245
Query: 324 GLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNSK 360
L E V CL +E RP +++ L N+K
Sbjct: 246 PLKEFV---EACLNKEPSFRPTAKELLKHKFILRNAK 279
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 12/196 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+GEG G V T + G+ VAVK++D Q + EV+++ HH N+V++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
GD+ +V EF+ GG++ D + T ++ + + L YLH++ VI+
Sbjct: 113 VGDELWVVMEFLEGGALTDIV-----THTRMNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 205 RDLKSSNILLGANLDPKLSDFGL-AKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
RD+KS +ILL ++ KLSDFG A++ + K ++GT + APE +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK---RKXLVGTPYWMAPEVISRLPYGTE 221
Query: 264 SDVYSFGVILLELITG 279
D++S G++++E+I G
Sbjct: 222 VDIWSLGIMVIEMIDG 237
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G +VAVKQL +G ++F E+ +L LH +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 141 GYC-ADGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G G Q L LV E++ G + D L + LD + + +S +G+EYL +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV-MGTYGYCAPEYARS 257
++RDL + NIL+ + K++DFGLAKL P + V + APE
Sbjct: 135 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 191
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +SDV+SFGV+L EL T
Sbjct: 192 NIFSRQSDVWSFGVVLYELFT 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 12/200 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVV----AVKQLDRN-GMQGNKEFLVEVLMLSLLHHPNLVN 138
+LG G FG VYKG G+ V A+K L+ G + N EF+ E L+++ + HP+LV
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
L+G C + LV + M G + ++ V+E K + + A+G+ YL ++
Sbjct: 105 LLGVCLSPTIQ-LVTQLMPHGCLLEY---VHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 160
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
+++RDL + N+L+ + K++DFGLA+L EK + A E
Sbjct: 161 ---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ T +SDV+S+GV + EL+T
Sbjct: 218 KFTHQSDVWSYGVTIWELMT 237
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 126/277 (45%), Gaps = 28/277 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNLVNLIGYC 143
+G+G FG V+KG +VVA+K +D + E + E+ +LS P + G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+ ++ E++ GGS D L PLD T I +GL+YLH + I
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHSEKK---I 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K++N+LL + + KL+DFG+A G + + +GT + APE + K
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 264 SDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEK 323
+D++S G+ +EL G P+ + +F PK P P L + K
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPM---------KVLFLIPKNNP----PTLEGNY-SK 230
Query: 324 GLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNSK 360
L E V CL +E RP +++ L N+K
Sbjct: 231 PLKEFV---EACLNKEPSFRPTAKELLKHKFILRNAK 264
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 126/277 (45%), Gaps = 28/277 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNLVNLIGYC 143
+G+G FG V+KG +VVA+K +D + E + E+ +LS P + G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+ ++ E++ GGS D L PLD T I +GL+YLH + I
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHSEKK---I 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K++N+LL + + KL+DFG+A G + + +GT + APE + K
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 264 SDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEK 323
+D++S G+ +EL G P+ + +F PK P P L + K
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPM---------KVLFLIPKNNP----PTLEGNY-SK 230
Query: 324 GLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNSK 360
L E V CL +E RP +++ L N+K
Sbjct: 231 PLKEFV---EACLNKEPSFRPTAKELLKHKFILRNAK 264
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 23/228 (10%)
Query: 69 FRELAAATKNFRQECLLGEGGFGRVYKGTL-----QSNGQVVAVKQL-DRNGMQGNKEFL 122
+E++ + F +E LGE FG+VYKG L Q VA+K L D+ +EF
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 123 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLL------DVNET----- 171
E ++ + L HPN+V L+G +++ + S G + + L+ DV T
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 172 -KKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKL 230
K L+ + + + A G+EYL ++ V+++DL + N+L+ L+ K+SD GL +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 231 GPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ + + + APE G+ ++ SD++S+GV+L E+ +
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G+++L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKFL-- 150
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAK--LGPQGEKMNVTSRVMGTYGYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ L + + ++ + + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 250
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 251 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 33/281 (11%)
Query: 82 ECLLGEGGFGRVYKGTLQSNGQ---VVAVKQLDRNGM--QGNKEFLVEVLMLSLLHHPNL 136
E ++G G FG V +G L++ G+ VA+K L + G + +EFL E ++ HPN+
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ L G + +++ EFM G++D L +N+ + + + + G A G+ YL +
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDS-FLRLNDGQFTV--IQLVGMLRGIASGMRYLAE 134
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMG---TYGYCAPE 253
+ ++RDL + NIL+ +NL K+SDFGL++ + + +G + APE
Sbjct: 135 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 254 YARSGELTVKSDVYSFGVILLELIT-GRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMA 312
+ T SD +S+G+++ E+++ G R + Q++I + +R P PD
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGER---PYWDMSNQDVINAIEQDYRLPPP-PDCP 247
Query: 313 DPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTAL 353
L + C Q++ ARP VV+AL
Sbjct: 248 TSLHQLMLD-------------CWQKDRNARPRFPQVVSAL 275
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G +VAVKQL +G ++F E+ +L LH +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 141 GYC-ADGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G G Q L LV E++ G + D L + LD + + +S +G+EYL +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV-MGTYGYCAPEYARS 257
++RDL + NIL+ + K++DFGLAKL P + V + APE
Sbjct: 136 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 192
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +SDV+SFGV+L EL T
Sbjct: 193 NIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G +VAVKQL +G ++F E+ +L LH +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 141 GYC-ADGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G G Q L LV E++ G + D L + LD + + +S +G+EYL +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV-MGTYGYCAPEYARS 257
++RDL + NIL+ + K++DFGLAKL P + V + APE
Sbjct: 148 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 204
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +SDV+SFGV+L EL T
Sbjct: 205 NIFSRQSDVWSFGVVLYELFT 225
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 136/303 (44%), Gaps = 34/303 (11%)
Query: 59 TKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN 118
T+N+ Q+ EL F + +G+G FG V+KG +VVA+K +D +
Sbjct: 15 TENLYFQSMDPEEL------FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE 68
Query: 119 KEFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDW 177
E + E+ +LS P + G + ++ E++ GGS D L PLD
Sbjct: 69 IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDE 123
Query: 178 TTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKM 237
T I +GL+YLH + I+RD+K++N+LL + + KL+DFG+A G +
Sbjct: 124 TQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQ 178
Query: 238 NVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAW 297
+ +GT + APE + K+D++S G+ +EL G P+
Sbjct: 179 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-------- 230
Query: 298 AQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLS 357
+ +F PK P P L + K L E V CL +E RP +++ L
Sbjct: 231 -KVLFLIPKNNP----PTLEGNY-SKPLKEFV---EACLNKEPSFRPTAKELLKHKFILR 281
Query: 358 NSK 360
N+K
Sbjct: 282 NAK 284
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G+++L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKFL-- 147
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 247
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 248 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G+++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKFL-- 149
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 249
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 250 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G+++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKFL-- 149
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 249
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 250 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 13/201 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+G FG V Y + G +VAVKQL +G ++F E+ +L LH +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 141 G--YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
G Y + LV E++ G + D L + LD + + +S +G+EYL +
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV-MGTYGYCAPEYARS 257
++RDL + NIL+ + K++DFGLAKL P + V + APE
Sbjct: 132 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSD 188
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ +SDV+SFGV+L EL T
Sbjct: 189 NIFSRQSDVWSFGVVLYELFT 209
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G+++L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKFL-- 150
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 250
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 251 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+GEG G V T++S+G++VAVK++D Q + EV+++ H N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
GD+ +V EF+ GG++ D V T+ ++ + Q L LH + VI+
Sbjct: 219 VGDELWVVMEFLEGGALTD---IVTHTR--MNEEQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RD+KS +ILL + KLSDFG +++ ++GT + APE +
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 265 DVYSFGVILLELITG 279
D++S G++++E++ G
Sbjct: 329 DIWSLGIMVIEMVDG 343
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G+++L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKFL-- 154
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 254
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 255 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 297
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 13/199 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQL---DRNGMQGNKEFLVEVLMLSLLHHPNLVNLIG 141
LG GG VY VA+K + R + K F EV S L H N+V++I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
+ D LV E++ G ++ +++ E+ PL T + + G+++ HD
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQILDGIKHAHDMR--- 131
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+++RD+K NIL+ +N K+ DFG+AK + + T+ V+GT Y +PE A+ GE T
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET-SLTQTNHVLGTVQYFSPEQAK-GEAT 189
Query: 262 VK-SDVYSFGVILLELITG 279
+ +D+YS G++L E++ G
Sbjct: 190 DECTDIYSIGIVLYEMLVG 208
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNL 139
++G G FG VY GTL N G+ + AVK L+R G +FL E +++ HPN+++L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 140 IGYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG--AAQGLEYLHD 196
+G C + L+V +M G + + + NET P T + I G A+G+++L
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNP---TVKDLIGFGLQVAKGMKFL-- 208
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEY 254
A+ ++RDL + N +L K++DFGLA+ E +V ++ + A E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++ + T KSDV+SFGV+L EL+T P + D F D+
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTR------------------GAPPYPDVNTF-DITVY 308
Query: 315 LL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
LL R PE + + C +A RP S++V+ +S
Sbjct: 309 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
F QE +G G FG V+ G N VA+K + R G ++F+ E ++ L HP LV
Sbjct: 11 TFVQE--IGSGQFGLVHLGYWL-NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 66
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPL-DWTTRMKIASGAAQGLEYLHD 196
L G C + LV EFM G + D+L T++ L T + + +G+ YL +
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEE 122
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
VI+RDL + N L+G N K+SDFG+ + + + T + +PE
Sbjct: 123 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 178
Query: 257 SGELTVKSDVYSFGVILLELITGRRV 282
+ KSDV+SFGV++ E+ + ++
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGKI 204
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 26/213 (12%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPNLVNL 139
++GEG FG+V K ++ +G + A+K++ + + ++F E+ +L L HHPN++NL
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLD------------VNETKKPLDWTTRMKIASGA 187
+G C L E+ G++ D L N T L + A+
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY 247
A+G++YL K I+RDL + NIL+G N K++DFGL++ G+++ V + MG
Sbjct: 142 ARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYV-KKTMGRL 193
Query: 248 --GYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ A E T SDV+S+GV+L E+++
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNLVNLIGYC 143
+G+G FG VYKG +VVA+K +D + E + E+ +LS P + G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+ ++ E++ GGS D L PL+ T I +GL+YLH + I
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHSERK---I 138
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K++N+LL D KL+DFG+A G + + +GT + APE + K
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 264 SDVYSFGVILLELITG 279
+D++S G+ +EL G
Sbjct: 197 ADIWSLGITAIELAKG 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 99
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 154
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 155 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 208
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGK 229
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 26/213 (12%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPNLVNL 139
++GEG FG+V K ++ +G + A+K++ + + ++F E+ +L L HHPN++NL
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLD------------VNETKKPLDWTTRMKIASGA 187
+G C L E+ G++ D L N T L + A+
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY 247
A+G++YL K I+RDL + NIL+G N K++DFGL++ G+++ V + MG
Sbjct: 152 ARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYV-KKTMGRL 203
Query: 248 --GYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ A E T SDV+S+GV+L E+++
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 36/280 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 90
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 91 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 145
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 146 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 199
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQ 319
K D++S GV+ E + G+ P + + I R FPD
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGK------PPFEANTYQETYKRISRVEFTFPD--------- 244
Query: 320 FPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
F +G A + + L+ RP++ +V+ +NS
Sbjct: 245 FVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANS 281
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+GEG G V T++S+G++VAVK++D Q + EV+++ H N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
GD+ +V EF+ GG++ D + T ++ + Q L LH + VI+
Sbjct: 97 VGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RD+KS +ILL + KLSDFG +++ ++GT + APE +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 265 DVYSFGVILLELITG 279
D++S G++++E++ G
Sbjct: 207 DIWSLGIMVIEMVDG 221
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
F QE +G G FG V+ G N VA+K + + G +F+ E ++ L HP LV
Sbjct: 30 TFVQE--IGSGQFGLVHLGYWL-NKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLV 85
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWT-TRMKIASGAAQGLEYLHD 196
L G C + LV+EFM G + D+L T++ L T + + +G+ YL +
Sbjct: 86 QLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEE 141
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
VI+RDL + N L+G N K+SDFG+ + + + T + +PE
Sbjct: 142 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 197
Query: 257 SGELTVKSDVYSFGVILLELITGRRV 282
+ KSDV+SFGV++ E+ + ++
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFSEGKI 223
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+GEG G V T++S+G++VAVK++D Q + EV+++ H N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
GD+ +V EF+ GG++ D + T ++ + Q L LH + VI+
Sbjct: 99 VGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RD+KS +ILL + KLSDFG +++ ++GT + APE +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 265 DVYSFGVILLELITG 279
D++S G++++E++ G
Sbjct: 209 DIWSLGIMVIEMVDG 223
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 99
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 154
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + ++ GT Y PE
Sbjct: 155 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRM 208
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGK 229
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 29/281 (10%)
Query: 82 ECLLGEGGFGRVYKGTLQSNGQ---VVAVKQLDRNGM-QGNKEFLVEVLMLSLLHHPNLV 137
E ++G G FG V G L+ G+ VA+K L + ++FL E ++ HPN++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
+L G +++ E+M GS+ D L N+ + + + + G G++YL D
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDM 135
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT-YGYCAPEYAR 256
+ ++RDL + NIL+ +NL K+SDFG++++ + T+R + APE
Sbjct: 136 S---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 257 SGELTVKSDVYSFGVILLELIT-GRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPL 315
+ T SDV+S+G+++ E+++ G R + Q++I + +R P P M P+
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGER---PYWDMSNQDVIKAIEEGYRLP---PPMDCPI 246
Query: 316 LRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFL 356
Q + C Q+E RP +V L L
Sbjct: 247 ALHQ-----------LMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 17/215 (7%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV----EVLMLSLLHHPNLVNL 139
+LG GG V+ + + VAVK L R + + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 140 I----GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
G +V E++ G + L D+ T+ P+ +++ + A Q L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVT----LRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAPEY 254
+I+RD+K +NIL+ A K+ DFG+A+ + G + T+ V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPV 289
AR + +SDVYS G +L E++TG PV
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 78
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 133
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEXIEGRX 187
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGK 208
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+GEG G V T++S+G++VAVK++D Q + EV+++ H N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
GD+ +V EF+ GG++ D V T+ ++ + Q L LH + VI+
Sbjct: 142 VGDELWVVMEFLEGGALTD---IVTHTR--MNEEQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RD+KS +ILL + KLSDFG +++ ++GT + APE +
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 265 DVYSFGVILLELITG 279
D++S G++++E++ G
Sbjct: 252 DIWSLGIMVIEMVDG 266
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 78
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G V L +++ D + A L Y H K
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANALSYCHSKR- 133
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 187
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 79 FRQECLLGEGGFGRVYKGTLQSNGQ---VVAVKQLDRNGM-QGNKEFLVEVLMLSLLHHP 134
+ E ++G G FG V G L+ G+ VA+K L + ++FL E ++ HP
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYL 194
N+++L G +++ E+M GS+ D L N+ + + + + G G++YL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTV--IQLVGMLRGIGSGMKYL 126
Query: 195 HDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT-YGYCAPE 253
D + ++RDL + NIL+ +NL K+SDFG++++ + T+R + APE
Sbjct: 127 SDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 183
Query: 254 YARSGELTVKSDVYSFGVILLELIT-GRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMA 312
+ T SDV+S+G+++ E+++ G R + Q++I + +R P P M
Sbjct: 184 AIAYRKFTSASDVWSYGIVMWEVMSYGER---PYWDMSNQDVIKAIEEGYRLP---PPMD 237
Query: 313 DPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFL 356
P+ Q + C Q+E RP +V L L
Sbjct: 238 CPIALHQ-----------LMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 17/215 (7%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV----EVLMLSLLHHPNLVNL 139
+LG GG V+ + + VAVK L R + + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 140 I----GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
G +V E++ G + L D+ T+ P+ +++ + A Q L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVT----LRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAPEY 254
+I+RD+K +NI++ A K+ DFG+A+ + G + T+ V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPV 289
AR + +SDVYS G +L E++TG PV
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+GEG G V T++S+G++VAVK++D Q + EV+++ H N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
GD+ +V EF+ GG++ D + T ++ + Q L LH + VI+
Sbjct: 88 VGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RD+KS +ILL + KLSDFG +++ ++GT + APE +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 265 DVYSFGVILLELITG 279
D++S G++++E++ G
Sbjct: 198 DIWSLGIMVIEMVDG 212
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 127/279 (45%), Gaps = 22/279 (7%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRN-GMQGNKEFLVEVLMLSLLHHPNLVNL 139
LGEG FG+V Y T G++VAVK L G Q + E+ +L L+H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 140 IGYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
G C D ++ LV E++ GS+ D+L + + + A +G+ YLH +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYAR 256
I+R L + N+LL + K+ DFGLAK P+G E V + APE +
Sbjct: 132 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 257 SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQ--NLIAWAQPIFRDPKRFPDMADP 314
+ SDV+SFGV L EL+T D+ + + LI Q R ++ +
Sbjct: 189 ECKFYYASDVWSFGVTLYELLT---YCDSNQSPHTKFTELIGHTQGQM-TVLRLTELLER 244
Query: 315 LLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTAL 353
R P++ E + C + EA RP ++V L
Sbjct: 245 GERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 283
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 74
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 129
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + ++ GT Y PE
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDYLPPEMIEGRM 183
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGK 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 74
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 129
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + ++ GT Y PE
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRM 183
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGK 204
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 127/279 (45%), Gaps = 22/279 (7%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLDRN-GMQGNKEFLVEVLMLSLLHHPNLVNL 139
LGEG FG+V Y T G++VAVK L G Q + E+ +L L+H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 140 IGYCADGDQR--LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
G C D ++ LV E++ GS+ D+L + + + A +G+ YLH +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTSRVMGTYGYCAPEYAR 256
I+R L + N+LL + K+ DFGLAK P+G E V + APE +
Sbjct: 131 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 257 SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQ--NLIAWAQPIFRDPKRFPDMADP 314
+ SDV+SFGV L EL+T D+ + + LI Q R ++ +
Sbjct: 188 ECKFYYASDVWSFGVTLYELLT---YCDSNQSPHTKFTELIGHTQGQM-TVLRLTELLER 243
Query: 315 LLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTAL 353
R P++ E + C + EA RP ++V L
Sbjct: 244 GERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 282
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV----EVLMLSLLHHPNLVNL 139
+LG GG V+ + + VAVK L R + + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 140 I----GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
G +V E++ G + L D+ T+ P+ +++ + A Q L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVT----LRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAPEY 254
+I+RD+K +NI++ A K+ DFG+A+ + G + T+ V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 255 ARSGELTVKSDVYSFGVILLELITG 279
AR + +SDVYS G +L E++TG
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 76
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 131
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 185
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGK 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 128
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + ++ GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRM 182
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 78
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 133
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + ++ GT Y PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRM 187
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGK 208
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+GEG G V T++S+G++VAVK++D Q + EV+++ H N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
GD+ +V EF+ GG++ D + T ++ + Q L LH + VI+
Sbjct: 92 VGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKS 264
RD+KS +ILL + KLSDFG +++ ++GT + APE +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 265 DVYSFGVILLELITG 279
D++S G++++E++ G
Sbjct: 202 DIWSLGIMVIEMVDG 216
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 128
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + ++ GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRM 182
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 128
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + + GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDYLPPEMIEGRM 182
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 78
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 133
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 187
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 128
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 182
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 78
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G V L +++ D + A L Y H K
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANALSYCHSKR- 133
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX----GTLDYLPPEMIEGRM 187
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGK 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHPNILRL 77
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L ++ D + A L Y H K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSYCHSKR- 132
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+N + K++DFG + P + + GT Y PE
Sbjct: 133 --VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 186
Query: 260 LTVKSDVYSFGVILLELITG 279
K D++S GV+ E + G
Sbjct: 187 HDEKVDLWSLGVLCYEFLVG 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 75
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 130
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 131 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRM 184
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGK 205
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%)
Query: 67 FTFRELAAATKN-FRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQ---GNKEFL 122
+ + E TKN FRQ +LG+GGFG V +++ G++ A K+L++ ++ G L
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL 232
Query: 123 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMK 182
E +L ++ +V+L D LV M+GG + H+ + + P +
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE--ARAVF 290
Query: 183 IASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSR 242
A+ GLE LH + ++YRDLK NILL + ++SD GLA P+G+ + R
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--TIKGR 345
Query: 243 VMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGR 280
V GT GY APE ++ T D ++ G +L E+I G+
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%)
Query: 67 FTFRELAAATKN-FRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQ---GNKEFL 122
+ + E TKN FRQ +LG+GGFG V +++ G++ A K+L++ ++ G L
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL 232
Query: 123 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMK 182
E +L ++ +V+L D LV M+GG + H+ + + P +
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE--ARAVF 290
Query: 183 IASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSR 242
A+ GLE LH + ++YRDLK NILL + ++SD GLA P+G+ + R
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--TIKGR 345
Query: 243 VMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGR 280
V GT GY APE ++ T D ++ G +L E+I G+
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 26/213 (12%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVV--AVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPNLVNL 139
++GEG FG+V K ++ +G + A+K++ + + ++F E+ +L L HHPN++NL
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLD------------VNETKKPLDWTTRMKIASGA 187
+G C L E+ G++ D L N T L + A+
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY 247
A+G++YL K I+R+L + NIL+G N K++DFGL++ G+++ V + MG
Sbjct: 149 ARGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSR----GQEVYV-KKTMGRL 200
Query: 248 --GYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ A E T SDV+S+GV+L E+++
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 130/283 (45%), Gaps = 33/283 (11%)
Query: 82 ECLLGEGGFGRVYKGTLQSNGQV---VAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNLV 137
E ++G G FG V G L+ G+ VA+K L + + +FL E ++ HPN++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
+L G ++V E+M GS+D L + + + G + G++YL D
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT-YGYCAPEYAR 256
++RDL + NIL+ +NL K+SDFGL+++ + T+R + APE
Sbjct: 144 G---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 257 SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE---QNLIAWAQPIFRDPKRFPDMAD 313
+ T SDV+S+G+++ E+++ RP E Q++I + +R P M
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVSY-----GERPYWEMTNQDVIKAVEEGYRLPS---PMDC 252
Query: 314 PLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFL 356
P Q + C Q+E +RP ++V L L
Sbjct: 253 PAALYQ-----------LMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 23/250 (9%)
Query: 54 TKQDETKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQL 110
T +D T+ ++ +EL A N + ++G G FG V G L+ S ++ VA+K L
Sbjct: 27 TFEDPTQTVHEFA---KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 111 DRNGMQGNK-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVN 169
+ + +FL E ++ HPN++ L G ++V E+M GS+D L +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
+ ++ G A G++YL D ++RDL + NIL+ +NL K+SDFGLA+
Sbjct: 142 AQFTVIQLVGMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLAR 195
Query: 230 LGPQGEKMNVTSRVMGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVI---- 283
+ + T+R + +PE + T SDV+S+G++L E+++ G R
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 284 --DTTRPVDE 291
D + VDE
Sbjct: 256 NQDVIKAVDE 265
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 18/208 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQ-----VVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + T G+ VAVK L KE L+ L M L H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHL-------LDVNETKKPLDWTTRMKIASGAAQG 190
NL+G C G L++ E+ G + + L LD E +PL+ + +S AQG
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD-KEDGRPLELRDLLHFSSQVAQG 164
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
+ +L A+ I+RD+ + N+LL K+ DFGLA+ V +
Sbjct: 165 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 221
Query: 251 APEYARSGELTVKSDVYSFGVILLELIT 278
APE TV+SDV+S+G++L E+ +
Sbjct: 222 APESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 18/208 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQ-----VVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + T G+ VAVK L KE L+ L M L H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHL-------LDVNETKKPLDWTTRMKIASGAAQG 190
NL+G C G L++ E+ G + + L LD E +PL+ + +S AQG
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD-KEDGRPLELRDLLHFSSQVAQG 172
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
+ +L A+ I+RD+ + N+LL K+ DFGLA+ V +
Sbjct: 173 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 229
Query: 251 APEYARSGELTVKSDVYSFGVILLELIT 278
APE TV+SDV+S+G++L E+ +
Sbjct: 230 APESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 36/280 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY +++ ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 74 YGYFHDSTRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKK- 128
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + + GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEGRM 182
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQ 319
K D++S GV+ E + G+ + D I+ R FPD
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRIS------RVEFTFPD--------- 227
Query: 320 FPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
F +G + + + L+ RP++ +V+ +NS
Sbjct: 228 FVTEGARDLI---SRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 8/198 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM-QGNKEFLV-EVLMLSLLHHPNLVNLIGY 142
+G G +GR K +S+G+++ K+LD M + K+ LV EV +L L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 143 CADGDQRLL--VYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN- 199
D L V E+ GG + + + ++ LD +++ + L+ H +++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 200 -PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK +N+ L + KL DFGLA++ E + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE--DFAKEFVGTPYYMSPEQMNRM 191
Query: 259 ELTVKSDVYSFGVILLEL 276
KSD++S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 142/309 (45%), Gaps = 34/309 (11%)
Query: 54 TKQDETKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQL 110
T +D T+ ++ +EL A N + ++G G FG V G L+ S ++ VA+K L
Sbjct: 27 TYEDPTQTVHEFA---KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 111 DRNGMQGNK-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVN 169
+ + +FL E ++ HPN++ L G ++V E+M GS+D L +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
+ ++ G A G++YL D ++RDL + NIL+ +NL K+SDFGL++
Sbjct: 142 AQFTVIQLVGMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 230 LGPQGEKMNVTSRVMGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVIDTTR 287
+ + T+R + +PE + T SDV+S+G++L E+++ G R
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER---PYW 252
Query: 288 PVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMS 347
+ Q++I +R P P M P Q + C Q++ RP
Sbjct: 253 EMSNQDVIKAVDEGYRLP---PPMDCPAALYQ-----------LMLDCWQKDRNNRPKFE 298
Query: 348 DVVTALSFL 356
+V+ L L
Sbjct: 299 QIVSILDKL 307
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 72
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 73 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 127
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 128 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 181
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGK 202
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 74
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 129
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEGRM 183
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGK 204
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 142/309 (45%), Gaps = 34/309 (11%)
Query: 54 TKQDETKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQL 110
T +D T+ ++ +EL A N + ++G G FG V G L+ S ++ VA+K L
Sbjct: 25 TYEDPTQTVHEFA---KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 79
Query: 111 DRNGMQGNK-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVN 169
+ + +FL E ++ HPN++ L G ++V E+M GS+D L +
Sbjct: 80 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 139
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
+ ++ G A G++YL D ++RDL + NIL+ +NL K+SDFGL++
Sbjct: 140 AQFTVIQLVGMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR 193
Query: 230 LGPQGEKMNVTSRVMGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVIDTTR 287
+ + T+R + +PE + T SDV+S+G++L E+++ G R
Sbjct: 194 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER---PYW 250
Query: 288 PVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMS 347
+ Q++I +R P P M P Q + C Q++ RP
Sbjct: 251 EMSNQDVIKAVDEGYRLP---PPMDCPAALYQ-----------LMLDCWQKDRNNRPKFE 296
Query: 348 DVVTALSFL 356
+V+ L L
Sbjct: 297 QIVSILDKL 305
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 76
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 131
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 185
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGK 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 76
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 131
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + + GT Y PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEGRM 185
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGK 206
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 142/309 (45%), Gaps = 34/309 (11%)
Query: 54 TKQDETKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQL 110
T +D T+ ++ +EL A N + ++G G FG V G L+ S ++ VA+K L
Sbjct: 27 TYEDPTQTVHEFA---KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 111 DRNGMQGNK-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVN 169
+ + +FL E ++ HPN++ L G ++V E+M GS+D L +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
+ ++ G A G++YL D ++RDL + NIL+ +NL K+SDFGL++
Sbjct: 142 AQFTVIQLVGMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 230 LGPQGEKMNVTSRVMGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVIDTTR 287
+ + T+R + +PE + T SDV+S+G++L E+++ G R
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER---PYW 252
Query: 288 PVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMS 347
+ Q++I +R P P M P Q + C Q++ RP
Sbjct: 253 EMSNQDVIKAVDEGYRLP---PPMDCPAALYQ-----------LMLDCWQKDRNNRPKFE 298
Query: 348 DVVTALSFL 356
+V+ L L
Sbjct: 299 QIVSILDKL 307
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 137/288 (47%), Gaps = 35/288 (12%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQL---DRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
L+GEG +G V K + G++VA+K+ D + M K + E+ +L L H NLVNL+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV-KKIAMREIKLLKQLRHENLVNLL 90
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
C + LV+EF+ +DD L N LD+ K G+ + H
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCHSHN-- 144
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
+I+RD+K NIL+ + KL DFG A+ L GE V + T Y APE
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---VYDDEVATRWYRAPELLVGDV 200
Query: 260 LTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQ--------NLIAWAQPIF-RDP---- 305
K+ DV++ G ++ E+ G + +D+ NLI Q +F ++P
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260
Query: 306 KRFPDMA--DPLLRKQFPEKGLNEAVA-IAAMCLQEEAGARPLMSDVV 350
R P++ +PL R+ +P+ L+E V +A CL + RP ++++
Sbjct: 261 VRLPEIKEREPLERR-YPK--LSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHPNILRL 77
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L ++ D + A L Y H K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSYCHSKR- 132
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+N + K++DFG + P + + GT Y PE
Sbjct: 133 --VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEGRM 186
Query: 260 LTVKSDVYSFGVILLELITG 279
K D++S GV+ E + G
Sbjct: 187 HDEKVDLWSLGVLCYEFLVG 206
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLL-HHPNLVNLIGY 142
L+G G +G+VYKG GQ+ A+K +D G + +E E+ ML HH N+ G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 143 CAD------GDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
DQ LV EF GSV D + + +W I +GL +LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQ 147
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGL-AKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
VI+RD+K N+LL N + KL DFG+ A+L + N +GT + APE
Sbjct: 148 HK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT---FIGTPYWMAPEVI 201
Query: 256 RSGE-----LTVKSDVYSFGVILLELITG 279
E KSD++S G+ +E+ G
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 82 ECLLGEGGFGRVYKGTLQSNGQ---VVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNLV 137
E ++G G FG V G L+ G+ VA+K L + + +FL E ++ HPN++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
+L G +++ EFM GS+D L + + + G A G++YL D
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYLADM 128
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMG---TYGYCAPEY 254
++R L + NIL+ +NL K+SDFGL++ + +G + APE
Sbjct: 129 N---YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 255 ARSGELTVKSDVYSFGVILLELIT 278
+ + T SDV+S+G+++ E+++
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 22/215 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK---EFLVEVLMLSLLHHPNLVNLIG 141
LG G FG+V G Q G VAVK L+R ++ + E+ L L HP+++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
+ +V E++SGG + D++ ++ ++ ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEE----MEARRLFQQILSAVDYCHRHM--- 131
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
V++RDLK N+LL A+++ K++DFGL+ + GE + + G+ Y APE SG L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVI-SGRLY 187
Query: 262 V--KSDVYSFGVILLELITGRRVIDTTRPVDEQNL 294
+ D++S GVIL L+ G T P D++++
Sbjct: 188 AGPEVDIWSCGVILYALLCG------TLPFDDEHV 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 123/250 (49%), Gaps = 23/250 (9%)
Query: 54 TKQDETKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQL 110
T +D T+ ++ +EL A N + ++G G FG V G L+ S ++ VA+K L
Sbjct: 27 TFEDPTQTVHEFA---KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 111 DRNGMQGNK-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVN 169
+ + +FL E ++ HPN++ L G ++V E+M GS+D L +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
+ ++ G A G++YL D ++RDL + NIL+ +NL K+SDFGL++
Sbjct: 142 AQFTVIQLVGMLR---GIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 230 LGPQGEKMNVTSRVMGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVI---- 283
+ + T+R + +PE + T SDV+S+G++L E+++ G R
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 284 --DTTRPVDE 291
D + VDE
Sbjct: 256 NQDVIKAVDE 265
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 77
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 132
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 133 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 186
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGK 207
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV----EVLMLSLLHHPNLVNL 139
+LG GG V+ + VAVK L R + + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 140 IGY----CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
G +V E++ G + L D+ T+ P+ +++ + A Q L + H
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVT----LRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAPEY 254
+I+RD+K +NI++ A K+ DFG+A+ + G + T+ V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPV 289
AR + +SDVYS G +L E++TG PV
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 128
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + + GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEGRM 182
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 128
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + + GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGTLDYLPPEMIEGRM 182
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 117/236 (49%), Gaps = 24/236 (10%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQLDRNGMQGNK-EFLVEV 125
+EL A N + ++G G FG V G L+ S ++ VA+K L + + +FL E
Sbjct: 11 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 126 LMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLL--DVNETKKPLDWTTRMKI 183
++ HPN++ L G ++V E+M GS+D L D T L + +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGM 123
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
G A G++YL D ++RDL + NIL+ +NL K+SDFGL+++ + T+R
Sbjct: 124 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 244 MGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVI------DTTRPVDE 291
+ +PE + T SDV+S+G++L E+++ G R D + VDE
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 236
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQV----VAVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
R+ +LG G FG V+KG G+ V +K + D++G Q + +L + L
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKP---LDWTTRMKIASGAAQ 189
H ++V L+G C G LV +++ GS+ DH+ P L+W ++ A+
Sbjct: 92 HAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AK 144
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL + +++R+L + N+LL + +++DFG+A L P +K + S +
Sbjct: 145 GMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 201
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E G+ T +SDV+S+GV + EL+T
Sbjct: 202 MALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 75
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 130
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K+++FG + P + + GT Y PE
Sbjct: 131 --VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 184
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGK 205
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 24/230 (10%)
Query: 64 AQTFTFRELAAATKNFRQEC---------LLGEGGFGRVYKGTLQSNGQV---VAVKQLD 111
A+ T+ E A ++F +E ++G G G V G L+ GQ VA+K L
Sbjct: 27 AEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK 86
Query: 112 RNGMQ-GNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE 170
+ ++FL E ++ HPN++ L G G ++V E+M GS+D L +
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG 146
Query: 171 TKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKL 230
+ ++ G G+ YL D ++RDL + N+L+ +NL K+SDFGL+++
Sbjct: 147 QFTIMQLVGMLR---GVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRV 200
Query: 231 ---GPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELI 277
P ++ + APE + SDV+SFGV++ E++
Sbjct: 201 LEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 123/250 (49%), Gaps = 23/250 (9%)
Query: 54 TKQDETKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQL 110
T +D T+ ++ +EL A N + ++G G FG V G L+ S ++ VA+K L
Sbjct: 27 TFEDPTQTVHEFA---KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 111 DRNGMQGNK-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVN 169
+ + +FL E ++ HPN++ L G ++V E+M GS+D L +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
+ ++ G A G++YL D ++RDL + NIL+ +NL K+SDFGL++
Sbjct: 142 AQFTVIQLVGMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 230 LGPQGEKMNVTSRVMGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVI---- 283
+ + T+R + +PE + T SDV+S+G++L E+++ G R
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 284 --DTTRPVDE 291
D + VDE
Sbjct: 256 NQDVIKAVDE 265
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 142/309 (45%), Gaps = 34/309 (11%)
Query: 54 TKQDETKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQL 110
T +D T+ ++ +EL A N + ++G G FG V G L+ S ++ VA+K L
Sbjct: 27 TFEDPTQTVHEFA---KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 111 DRNGMQGNK-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVN 169
+ + +FL E ++ HPN++ L G ++V E+M GS+D L +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
+ ++ G A G++YL D ++RDL + NIL+ +NL K+SDFGL++
Sbjct: 142 AQFTVIQLVGMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 230 LGPQGEKMNVTSRVMGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVIDTTR 287
+ + T+R + +PE + T SDV+S+G++L E+++ G R
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER---PYW 252
Query: 288 PVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMS 347
+ Q++I +R P P M P Q + C Q++ RP
Sbjct: 253 EMSNQDVIKAVDEGYRLP---PPMDCPAALYQ-----------LMLDCWQKDRNNRPKFE 298
Query: 348 DVVTALSFL 356
+V+ L L
Sbjct: 299 QIVSILDKL 307
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV----EVLMLSLLHHPNLVNL 139
+LG GG V+ + VAVK L R + + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 140 I----GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
G +V E++ G + L D+ T+ P+ +++ + A Q L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVT----LRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAPEY 254
+I+RD+K +NI++ A K+ DFG+A+ + G + T+ V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPV 289
AR + +SDVYS G +L E++TG PV
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 76
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 131
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRM 185
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGK 206
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 24/230 (10%)
Query: 64 AQTFTFRELAAATKNFRQEC---------LLGEGGFGRVYKGTLQSNGQV---VAVKQLD 111
A+ T+ E A ++F +E ++G G G V G L+ GQ VA+K L
Sbjct: 27 AEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK 86
Query: 112 RNGMQ-GNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE 170
+ ++FL E ++ HPN++ L G G ++V E+M GS+D L +
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG 146
Query: 171 TKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKL 230
+ ++ G G+ YL D ++RDL + N+L+ +NL K+SDFGL+++
Sbjct: 147 QFTIMQLVGMLR---GVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRV 200
Query: 231 ---GPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELI 277
P ++ + APE + SDV+SFGV++ E++
Sbjct: 201 LEDDPDAAYTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 70
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 71 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 125
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 126 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 179
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGK 200
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 117/236 (49%), Gaps = 24/236 (10%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQLDRNGMQGNK-EFLVEV 125
+EL A N + ++G G FG V G L+ S ++ VA+K L + + +FL E
Sbjct: 28 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 85
Query: 126 LMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLL--DVNETKKPLDWTTRMKI 183
++ HPN++ L G ++V E+M GS+D L D T L + +
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGM 140
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
G A G++YL D ++RDL + NIL+ +NL K+SDFGL+++ + T+R
Sbjct: 141 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 244 MGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVI------DTTRPVDE 291
+ +PE + T SDV+S+G++L E+++ G R D + VDE
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 253
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 128
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + + GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRM 182
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 28/277 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNLVNLIGYC 143
+G+G FG V+KG QVVA+K +D + E + E+ +LS + G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
G + ++ E++ GGS D L P D + +GL+YLH + I
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLL-----RAGPFDEFQIATMLKEILKGLDYLHSEKK---I 142
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K++N+LL D KL+DFG+A G + + +GT + APE + K
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 200
Query: 264 SDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEK 323
+D++S G+ +EL G P+ + +F PK P P L F K
Sbjct: 201 ADIWSLGITAIELAKGEPPNSDMHPM---------RVLFLIPKNNP----PTLVGDF-TK 246
Query: 324 GLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNSK 360
E + CL ++ RP +++ + NSK
Sbjct: 247 SFKEFI---DACLNKDPSFRPTAKELLKHKFIVKNSK 280
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQV----VAVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
R+ +LG G FG V+KG G+ V +K + D++G Q + +L + L
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKP---LDWTTRMKIASGAAQ 189
H ++V L+G C G LV +++ GS+ DH+ P L+W ++ A+
Sbjct: 74 HAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AK 126
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL + +++R+L + N+LL + +++DFG+A L P +K + S +
Sbjct: 127 GMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E G+ T +SDV+S+GV + EL+T
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 33/222 (14%)
Query: 85 LGEGGFGRVYK----GTLQSNG-QVVAVKQLDRNG---MQGNKEFLVEVLMLSLLHHPNL 136
+GEG FGRV++ G L +VAVK L MQ + F E +++ +PN+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD--FQREAALMAEFDNPNI 112
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETK--------------------KPLD 176
V L+G CA G L++E+M+ G +++ L ++ PL
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 177 WTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEK 236
++ IA A G+ YL ++ ++RDL + N L+G N+ K++DFGL++ +
Sbjct: 173 CAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 237 MNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ PE T +SDV+++GV+L E+ +
Sbjct: 230 YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 141/309 (45%), Gaps = 34/309 (11%)
Query: 54 TKQDETKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQL 110
T +D T+ ++ +EL A N + ++G G FG V G L+ S ++ VA+K L
Sbjct: 27 TFEDPTQTVHEFA---KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 111 DRNGMQGNK-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVN 169
+ + +FL E ++ HPN++ L G ++V E+M GS+D L +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
+ ++ G A G++YL D ++RDL + NIL+ +NL K+SDFGL +
Sbjct: 142 AQFTVIQLVGMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGR 195
Query: 230 LGPQGEKMNVTSRVMGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVIDTTR 287
+ + T+R + +PE + T SDV+S+G++L E+++ G R
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER---PYW 252
Query: 288 PVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMS 347
+ Q++I +R P P M P Q + C Q++ RP
Sbjct: 253 EMSNQDVIKAVDEGYRLP---PPMDCPAALYQ-----------LMLDCWQKDRNNRPKFE 298
Query: 348 DVVTALSFL 356
+V+ L L
Sbjct: 299 QIVSILDKL 307
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 76
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 131
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K++DFG + P + ++ GT Y PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRM 185
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGK 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 76
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
GY D + L+ E+ G+V L +++ D + A L Y H K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR- 131
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG+ + K+++FG + P + + GT Y PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM 185
Query: 260 LTVKSDVYSFGVILLELITGR 280
K D++S GV+ E + G+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGK 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 22/215 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK---EFLVEVLMLSLLHHPNLVNLIG 141
LG G FG+V G Q G VAVK L+R ++ + E+ L L HP+++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
+ +V E++SGG + D++ ++ ++ ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEE----MEARRLFQQILSAVDYCHRHM--- 131
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
V++RDLK N+LL A+++ K++DFGL+ + GE + + G+ Y APE SG L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPEVI-SGRLY 187
Query: 262 V--KSDVYSFGVILLELITGRRVIDTTRPVDEQNL 294
+ D++S GVIL L+ G T P D++++
Sbjct: 188 AGPEVDIWSCGVILYALLCG------TLPFDDEHV 216
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LGEG FG+V Y + G+ VAVK L +G + E+ +L L+H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 140 IGYCAD--GDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
G C + G+ L+ EF+ GS+ ++L + K ++ ++K A +G++YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAPEYAR 256
++RDL + N+L+ + K+ DFGL K + E V + APE
Sbjct: 146 Q---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 257 SGELTVKSDVYSFGVILLELIT 278
+ + SDV+SFGV L EL+T
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV----EVLMLSLLHHPNLVNL 139
+LG GG V+ + VAVK L R + + F + E + L+HP +V +
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 140 I----GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
G +V E++ G + L D+ T+ P+ +++ + A Q L + H
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVT----LRDIVHTEGPMTPKRAIEVIADACQALNFSH 150
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAPEY 254
+I+RD+K +NI++ A K+ DFG+A+ + G + T+ V+GT Y +PE
Sbjct: 151 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 255 ARSGELTVKSDVYSFGVILLELITG 279
AR + +SDVYS G +L E++TG
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLL-HH 133
NF +LG+G FG+V ++ G + AVK L ++ + + + + E +LSL +H
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P L L D+ V EF++GG + H+ + + D A+ L +
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI----QKSRRFDEARARFYAAEIISALMF 139
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LHDK +IYRDLK N+LL KL+DFG+ K G T+ GT Y APE
Sbjct: 140 LHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV--TTATFCGTPDYIAPE 194
Query: 254 YARSGELTVKSDVYSFGVILLELITGR 280
+ D ++ GV+L E++ G
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L++ + M G + D++ + + ++ L+W ++ A+
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
+LG G FG+V+K + G +A K + GM+ +E E+ +++ L H NL+ L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+ +LV E++ GG + D ++D + LD MK +G+ ++H ++
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRHMHQMY---IL 209
Query: 204 YRDLKSSNILLGANLDP---KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
+ DLK NIL N D K+ DFGLA+ EK+ V GT + APE +
Sbjct: 210 HLDLKPENILC-VNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYDFV 265
Query: 261 TVKSDVYSFGVILLELITG 279
+ +D++S GVI L++G
Sbjct: 266 SFPTDMWSVGVIAYMLLSG 284
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 86 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 138
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 139 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 141/309 (45%), Gaps = 34/309 (11%)
Query: 54 TKQDETKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQL 110
T +D T+ ++ +EL A N + ++G G FG V G L+ S ++ VA+K L
Sbjct: 27 TYEDPTQTVHEFA---KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 111 DRNGMQGNK-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVN 169
+ + +FL E ++ HPN++ L G ++V E M GS+D L +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD 141
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
+ ++ G A G++YL D ++RDL + NIL+ +NL K+SDFGL++
Sbjct: 142 AQFTVIQLVGMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 230 LGPQGEKMNVTSRVMGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVIDTTR 287
+ + T+R + +PE + T SDV+S+G++L E+++ G R
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER---PYW 252
Query: 288 PVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMS 347
+ Q++I +R P P M P Q + C Q++ RP
Sbjct: 253 EMSNQDVIKAVDEGYRLP---PPMDCPAALYQ-----------LMLDCWQKDRNNRPKFE 298
Query: 348 DVVTALSFL 356
+V+ L L
Sbjct: 299 QIVSILDKL 307
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L++ + M G + D++ + + ++ L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 85 LGEGGFGRV----YKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LGEG FG+V Y + G+ VAVK L +G + E+ +L L+H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 140 IGYCAD--GDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
G C + G+ L+ EF+ GS+ ++L + K ++ ++K A +G++YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAPEYAR 256
++RDL + N+L+ + K+ DFGL K + E V + APE
Sbjct: 134 Q---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 257 SGELTVKSDVYSFGVILLELIT 278
+ + SDV+SFGV L EL+T
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L++ + M G + D++ + + ++ L+W ++ A+
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L++ + M G + D++ + + ++ L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L++ + M G + D++ + + ++ L+W ++ A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L++ + M G + D++ + + ++ L+W ++ A+
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM-QGNKEFLV-EVLMLSLLHHPNLVNLIGY 142
+G G +GR K +S+G+++ K+LD M + K+ LV EV +L L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 143 CADGDQRLL--VYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN- 199
D L V E+ GG + + + ++ LD +++ + L+ H +++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 200 -PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK +N+ L + KL DFGLA++ + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 259 ELTVKSDVYSFGVILLEL 276
KSD++S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHH 133
K + + LG+GGF + Y+ T +V A K + ++ + ++ E+ + L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P++V G+ D D +V E S LL++++ +K + QG++Y
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRS----LLELHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAP 252
LH N VI+RDLK N+ L ++D K+ DFGLA K+ GE+ + GT Y AP
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTPNYIAP 211
Query: 253 EYARSGELTVKSDVYSFGVILLELITGRRVIDTT 286
E + + D++S G IL L+ G+ +T+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRN------GMQGNKEFLVEVLMLSLLHHPNLV 137
+LG GGFG V+ +++ G++ A K+L++ G QG +VE +L+ +H +V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
+L LV M+GG + H+ +V+E + + GLE+LH +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARS 257
+IYRDLK N+LL + + ++SD GLA G+ T GT G+ APE
Sbjct: 309 N---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--TKTKGYAGTPGFMAPELLLG 363
Query: 258 GELTVKSDVYSFGVILLELITGR 280
E D ++ GV L E+I R
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQLDRNGMQGNK-EFLVEV 125
+EL A N + ++G G FG V G L+ S ++ VA+K L + + +FL E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 126 LMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIAS 185
++ HPN++ L G ++V E M GS+D L + + ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR--- 154
Query: 186 GAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMG 245
G A G++YL D ++RDL + NIL+ +NL K+SDFGL+++ + T+R
Sbjct: 155 GIASGMKYLSDMG---AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 246 T-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVI------DTTRPVDE 291
+ +PE + T SDV+S+G++L E+++ G R D + VDE
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRN------GMQGNKEFLVEVLMLSLLHHPNLV 137
+LG GGFG V+ +++ G++ A K+L++ G QG +VE +L+ +H +V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
+L LV M+GG + H+ +V+E + + GLE+LH +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARS 257
+IYRDLK N+LL + + ++SD GLA G+ T GT G+ APE
Sbjct: 309 N---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--TKTKGYAGTPGFMAPELLLG 363
Query: 258 GELTVKSDVYSFGVILLELITGR 280
E D ++ GV L E+I R
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRN------GMQGNKEFLVEVLMLSLLHHPNLV 137
+LG GGFG V+ +++ G++ A K+L++ G QG +VE +L+ +H +V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
+L LV M+GG + H+ +V+E + + GLE+LH +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARS 257
+IYRDLK N+LL + + ++SD GLA G+ T GT G+ APE
Sbjct: 309 N---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--TKTKGYAGTPGFMAPELLLG 363
Query: 258 GELTVKSDVYSFGVILLELITGR 280
E D ++ GV L E+I R
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 132/300 (44%), Gaps = 54/300 (18%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
+F++ L+G GGFG+V+K + +G+ +K++ N + + EV L+ L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 138 NLIGYCADGDQR-----------------LLVYEFMSGGSVDDHLLDVNETKKPLDWTTR 180
+ G C DG + EF G+++ + K LD
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVLA 124
Query: 181 MKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNV 239
+++ +G++Y+H K +I RDLK SNI L K+ DFGL L G++
Sbjct: 125 LELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--- 178
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQ 299
R GT Y +PE S + + D+Y+ G+IL EL+ V DT
Sbjct: 179 -XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTA------------- 221
Query: 300 PIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLSNS 359
F K F D+ D ++ F +K E + + L ++ RP S+++ L+ S
Sbjct: 222 --FETSKFFTDLRDGIISDIFDKK---EKTLLQKL-LSKKPEDRPNTSEILRTLTVWKKS 275
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM-QGNKEFLV-EVLMLSLLHHPNLVNLIGY 142
+G G +GR K +S+G+++ K+LD M + K+ LV EV +L L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 143 CADGDQRLL--VYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN- 199
D L V E+ GG + + + ++ LD +++ + L+ H +++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 200 -PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK +N+ L + KL DFGLA++ + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 259 ELTVKSDVYSFGVILLEL 276
KSD++S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 116/236 (49%), Gaps = 24/236 (10%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQ--SNGQV-VAVKQLDRNGMQGNK-EFLVEV 125
+EL A N + ++G G FG V G L+ S ++ VA+K L + + +FL E
Sbjct: 11 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 126 LMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLL--DVNETKKPLDWTTRMKI 183
++ HPN++ L G ++V E M GS+D L D T L + +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGM 123
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
G A G++YL D ++RDL + NIL+ +NL K+SDFGL+++ + T+R
Sbjct: 124 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 244 MGT-YGYCAPEYARSGELTVKSDVYSFGVILLELIT-GRRVI------DTTRPVDE 291
+ +PE + T SDV+S+G++L E+++ G R D + VDE
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 236
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 82 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 134
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 135 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHH 133
K + + LG+GGF + Y+ T +V A K + ++ + ++ E+ + L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P++V G+ D D +V E S LL++++ +K + QG++Y
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRS----LLELHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAP 252
LH N VI+RDLK N+ L ++D K+ DFGLA K+ GE+ + GT Y AP
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAP 211
Query: 253 EYARSGELTVKSDVYSFGVILLELITGRRVIDTT 286
E + + D++S G IL L+ G+ +T+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 73 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AE 125
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 126 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRN------GMQGNKEFLVEVLMLSLLHHPNLV 137
+LG GGFG V+ +++ G++ A K+L++ G QG +VE +L+ +H +V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
+L LV M+GG + H+ +V+E + + GLE+LH +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARS 257
+IYRDLK N+LL + + ++SD GLA G+ T GT G+ APE
Sbjct: 309 N---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--TKTKGYAGTPGFMAPELLLG 363
Query: 258 GELTVKSDVYSFGVILLELITGR 280
E D ++ GV L E+I R
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 101 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 153
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 154 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 70 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 122
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 123 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHH 133
K + + LG+GGF + Y+ T +V A K + ++ + ++ E+ + L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P++V G+ D D +V E S LL++++ +K + QG++Y
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRS----LLELHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAP 252
LH N VI+RDLK N+ L ++D K+ DFGLA K+ GE+ + GT Y AP
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAP 211
Query: 253 EYARSGELTVKSDVYSFGVILLELITGRRVIDTT 286
E + + D++S G IL L+ G+ +T+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 133/311 (42%), Gaps = 49/311 (15%)
Query: 64 AQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNG-M 115
A F E A + LG+G FG VY+G + G V VA+K ++ M
Sbjct: 3 ADVFVPDEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASM 60
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVN 169
+ EFL E ++ + ++V L+G + G L++ E M+ G + +L ++ N
Sbjct: 61 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 120
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
P + +++A A G+ YL+ AN ++RDL + N ++ + K+ DFG+ +
Sbjct: 121 PVLAPPSLSKMIQMAGEIADGMAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 177
Query: 230 LGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT-------GRRV 282
+ + + + + +PE + G T SDV+SFGV+L E+ T G
Sbjct: 178 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 237
Query: 283 IDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGA 342
R V E L+ P PDM L+R MC Q
Sbjct: 238 EQVLRFVMEGGLLD-------KPDNCPDMLFELMR----------------MCWQYNPKM 274
Query: 343 RPLMSDVVTAL 353
RP ++++++
Sbjct: 275 RPSFLEIISSI 285
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 49/311 (15%)
Query: 64 AQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNG-M 115
A + E A + LG+G FG VY+G + G V VA+K ++ M
Sbjct: 6 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASM 63
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVN 169
+ EFL E ++ + ++V L+G + G L++ E M+ G + +L ++ N
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 123
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
P + +++A A G+ YL+ AN ++RDL + N ++ + K+ DFG+ +
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 230 LGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT-------GRRV 282
+ + + + + +PE + G T SDV+SFGV+L E+ T G
Sbjct: 181 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 240
Query: 283 IDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGA 342
R V E L+ P PDM L+R MC Q
Sbjct: 241 EQVLRFVMEGGLLD-------KPDNCPDMLFELMR----------------MCWQYNPKM 277
Query: 343 RPLMSDVVTAL 353
RP ++++++
Sbjct: 278 RPSFLEIISSI 288
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 128/262 (48%), Gaps = 25/262 (9%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDR-----NGMQGNKEFLVEVLM 127
A N++ LGEG FG+V + GQ VA+K +++ + MQG E E+
Sbjct: 9 GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISY 66
Query: 128 LSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGA 187
L LL HP+++ L D+ ++V E+ +G + D+++ ++ + +I S
Sbjct: 67 LRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA- 124
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY 247
+EY H +++RDLK N+LL +L+ K++DFGL+ + G N G+
Sbjct: 125 ---VEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSP 175
Query: 248 GYCAPEYARSGELTV--KSDVYSFGVILLELITGRRVI-DTTRPVDEQNLIAWAQPIFRD 304
Y APE SG+L + DV+S GVIL ++ R D + PV +N+ + ++
Sbjct: 176 NYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI---SNGVYTL 231
Query: 305 PKRFPDMADPLLRKQFPEKGLN 326
PK A L+++ LN
Sbjct: 232 PKFLSPGAAGLIKRMLIVNPLN 253
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 128/262 (48%), Gaps = 25/262 (9%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDR-----NGMQGNKEFLVEVLM 127
A N++ LGEG FG+V + GQ VA+K +++ + MQG E E+
Sbjct: 10 GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISY 67
Query: 128 LSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGA 187
L LL HP+++ L D+ ++V E+ +G + D+++ ++ + +I S
Sbjct: 68 LRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA- 125
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY 247
+EY H +++RDLK N+LL +L+ K++DFGL+ + G N G+
Sbjct: 126 ---VEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSP 176
Query: 248 GYCAPEYARSGELTV--KSDVYSFGVILLELITGRRVI-DTTRPVDEQNLIAWAQPIFRD 304
Y APE SG+L + DV+S GVIL ++ R D + PV +N+ + ++
Sbjct: 177 NYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI---SNGVYTL 232
Query: 305 PKRFPDMADPLLRKQFPEKGLN 326
PK A L+++ LN
Sbjct: 233 PKFLSPGAAGLIKRMLIVNPLN 254
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHH 133
K + + LG+GGF + Y+ T +V A K + ++ + ++ E+ + L +
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 85
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P++V G+ D D +V E S LL++++ +K + QG++Y
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRS----LLELHKRRKAVTEPEARYFMRQTIQGVQY 141
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAP 252
LH N VI+RDLK N+ L ++D K+ DFGLA K+ GE+ + GT Y AP
Sbjct: 142 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAP 195
Query: 253 EYARSGELTVKSDVYSFGVILLELITGRRVIDTT 286
E + + D++S G IL L+ G+ +T+
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHP 134
+F +LG+G FG+V + ++ A+K L ++ + + + +VE +L+LL P
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 135 NLVNLIGYCADGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
+ + C RL V E+++GG + H+ V + K+P + A+ + GL +
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP----QAVFYAAEISIGLFF 135
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKM--NVTSR-VMGTYGYC 250
LH + +IYRDLK N++L + K++DFG+ K E M VT+R GT Y
Sbjct: 136 LHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK-----EHMMDGVTTREFCGTPDYI 187
Query: 251 APEYARSGELTVKSDVYSFGVILLELITGRRVID 284
APE D +++GV+L E++ G+ D
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 25/262 (9%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDR-----NGMQGNKEFLVEVLM 127
A N++ LGEG FG+V + GQ VA+K +++ + MQG E E+
Sbjct: 4 GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISY 61
Query: 128 LSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGA 187
L LL HP+++ L D+ ++V E+ +G + D+++ ++ + +I S
Sbjct: 62 LRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA- 119
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY 247
+EY H +++RDLK N+LL +L+ K++DFGL+ + G + + G+
Sbjct: 120 ---VEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSP 170
Query: 248 GYCAPEYARSGELTV--KSDVYSFGVILLELITGRRVI-DTTRPVDEQNLIAWAQPIFRD 304
Y APE SG+L + DV+S GVIL ++ R D + PV +N+ + ++
Sbjct: 171 NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI---SNGVYTL 226
Query: 305 PKRFPDMADPLLRKQFPEKGLN 326
PK A L+++ LN
Sbjct: 227 PKFLSPGAAGLIKRMLIVNPLN 248
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 49/290 (16%)
Query: 85 LGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNG-MQGNKEFLVEVLMLSLLHHPNL 136
LG+G FG VY+G + G V VA+K ++ M+ EFL E ++ + ++
Sbjct: 18 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 75
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVNETKKPLDWTTRMKIASGAAQG 190
V L+G + G L++ E M+ G + +L ++ N P + +++A A G
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
+ YL+ AN ++RDL + N ++ + K+ DFG+ + + + + + +
Sbjct: 136 MAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 251 APEYARSGELTVKSDVYSFGVILLELIT-------GRRVIDTTRPVDEQNLIAWAQPIFR 303
+PE + G T SDV+SFGV+L E+ T G R V E L+
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD------- 245
Query: 304 DPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTAL 353
P PDM L+R MC Q RP ++++++
Sbjct: 246 KPDNCPDMLLELMR----------------MCWQYNPKMRPSFLEIISSI 279
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 25/261 (9%)
Query: 74 AATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDR-----NGMQGNKEFLVEVLML 128
A N++ LGEG FG+V + GQ VA+K +++ + MQG E E+ L
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 58
Query: 129 SLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAA 188
LL HP+++ L D+ ++V E+ +G + D+++ ++ + +I S
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA-- 115
Query: 189 QGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYG 248
+EY H +++RDLK N+LL +L+ K++DFGL+ + G N G+
Sbjct: 116 --VEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPN 167
Query: 249 YCAPEYARSGELTV--KSDVYSFGVILLELITGRRVI-DTTRPVDEQNLIAWAQPIFRDP 305
Y APE SG+L + DV+S GVIL ++ R D + PV +N+ + ++ P
Sbjct: 168 YAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI---SNGVYTLP 223
Query: 306 KRFPDMADPLLRKQFPEKGLN 326
K A L+++ LN
Sbjct: 224 KFLSPGAAGLIKRMLIVNPLN 244
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 19/260 (7%)
Query: 67 FTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQ--GNKEFLV- 123
F A + ++ + +LG+G FG V + GQ AVK + + ++ +KE L+
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 98
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L L HPN++ L + D LV E +GG + D ++ ++K +I
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARI 154
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGA---NLDPKLSDFGLAKLGPQGEKMNVT 240
G+ Y+H +++RDLK N+LL + + + ++ DFGL+ +KM
Sbjct: 155 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 211
Query: 241 SRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQP 300
+GT Y APE G K DV+S GVIL L++G + D + +
Sbjct: 212 ---IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKY 267
Query: 301 IFRDP--KRFPDMADPLLRK 318
F P K+ + A L+RK
Sbjct: 268 TFELPQWKKVSESAKDLIRK 287
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 120/260 (46%), Gaps = 19/260 (7%)
Query: 67 FTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQ--GNKEFLV- 123
F A + ++ + +LG+G FG V + GQ AVK + + ++ +KE L+
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L L HPN++ L + D LV E +GG + D ++ ++K +I
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARI 131
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVT 240
G+ Y+H +++RDLK N+LL + + ++ DFGL+ +KM
Sbjct: 132 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188
Query: 241 SRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQP 300
+GT Y APE G K DV+S GVIL L++G + D + +
Sbjct: 189 ---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKY 244
Query: 301 IFRDP--KRFPDMADPLLRK 318
F P K+ + A L+RK
Sbjct: 245 TFELPQWKKVSESAKDLIRK 264
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 74 AATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLH 132
+++ F+Q LG G + VYKG ++ G VA+K++ + +G + E+ ++ L
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGG---SVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
H N+V L ++ LV+EFM +D V T + L+ Q
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSR--TVGNTPRGLELNLVKYFQWQLLQ 119
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
GL + H+ +++RDLK N+L+ KL DFGLA+ G +N S + T Y
Sbjct: 120 GLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLAR--AFGIPVNTFSSEVVTLWY 174
Query: 250 CAPEYAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
AP+ S + D++S G IL E+ITG+ + T ++ LI
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 19/260 (7%)
Query: 67 FTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQ--GNKEFLV- 123
F A + ++ + +LG+G FG V + GQ AVK + + ++ +KE L+
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 99
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L L HPN++ L + D LV E +GG + D ++ ++K +I
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARI 155
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGA---NLDPKLSDFGLAKLGPQGEKMNVT 240
G+ Y+H +++RDLK N+LL + + + ++ DFGL+ +KM
Sbjct: 156 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 212
Query: 241 SRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQP 300
+GT Y APE G K DV+S GVIL L++G + D + +
Sbjct: 213 ---IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKY 268
Query: 301 IFRDP--KRFPDMADPLLRK 318
F P K+ + A L+RK
Sbjct: 269 TFELPQWKKVSESAKDLIRK 288
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 25/251 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV---EVLMLSLLHHPNLVNLIG 141
LGEG FG+V T Q VA+K + R ++ + + E+ L LL HP+++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
++V E+ +GG + D++++ KK + + +EY H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRHK--- 128
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+++RDLK N+LL NL+ K++DFGL+ + G N G+ Y APE +G+L
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVI-NGKLY 184
Query: 262 V--KSDVYSFGVILLELITGRRVID---TTRPVDEQNLIAWAQPIFRDPK-----RFPDM 311
+ DV+S G++L ++ GR D + N + P F P R +
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIV 244
Query: 312 ADPLLRKQFPE 322
ADP+ R E
Sbjct: 245 ADPMQRITIQE 255
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 49/311 (15%)
Query: 64 AQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNG-M 115
A + E A + LG+G FG VY+G + G V VA+K ++ M
Sbjct: 5 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASM 62
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVN 169
+ EFL E ++ + ++V L+G + G L++ E M+ G + +L ++ N
Sbjct: 63 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 122
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
P + +++A A G+ YL+ AN ++RDL + N ++ + K+ DFG+ +
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 230 LGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT-------GRRV 282
+ + + + + +PE + G T SDV+SFGV+L E+ T G
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 239
Query: 283 IDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGA 342
R V E L+ P PDM L+R MC Q
Sbjct: 240 EQVLRFVMEGGLL-------DKPDNCPDMLFELMR----------------MCWQYNPKM 276
Query: 343 RPLMSDVVTAL 353
RP ++++++
Sbjct: 277 RPSFLEIISSI 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 49/311 (15%)
Query: 64 AQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNG-M 115
A + E A + LG+G FG VY+G + G V VA+K ++ M
Sbjct: 6 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASM 63
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVN 169
+ EFL E ++ + ++V L+G + G L++ E M+ G + +L ++ N
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 123
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
P + +++A A G+ YL+ AN ++RDL + N ++ + K+ DFG+ +
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 230 LGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT-------GRRV 282
+ + + + + +PE + G T SDV+SFGV+L E+ T G
Sbjct: 181 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 240
Query: 283 IDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGA 342
R V E L+ P PDM L+R MC Q
Sbjct: 241 EQVLRFVMEGGLLD-------KPDNCPDMLFELMR----------------MCWQYNPKM 277
Query: 343 RPLMSDVVTAL 353
RP ++++++
Sbjct: 278 RPSFLEIISSI 288
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 49/311 (15%)
Query: 64 AQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNG-M 115
A + E A + LG+G FG VY+G + G V VA+K ++ M
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASM 69
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVN 169
+ EFL E ++ + ++V L+G + G L++ E M+ G + +L ++ N
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 129
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
P + +++A A G+ YL+ AN ++RDL + N ++ + K+ DFG+ +
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 230 LGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT-------GRRV 282
+ + + + + +PE + G T SDV+SFGV+L E+ T G
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246
Query: 283 IDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGA 342
R V E L+ P PDM L+R MC Q
Sbjct: 247 EQVLRFVMEGGLL-------DKPDNCPDMLFELMR----------------MCWQYNPKM 283
Query: 343 RPLMSDVVTAL 353
RP ++++++
Sbjct: 284 RPSFLEIISSI 294
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S L+H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 120/260 (46%), Gaps = 19/260 (7%)
Query: 67 FTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQ--GNKEFLV- 123
F A + ++ + +LG+G FG V + GQ AVK + + ++ +KE L+
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 81
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L L HPN++ L + D LV E +GG + D ++ ++K +I
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARI 137
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVT 240
G+ Y+H +++RDLK N+LL + + ++ DFGL+ +KM
Sbjct: 138 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 194
Query: 241 SRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQP 300
+GT Y APE G K DV+S GVIL L++G + D + +
Sbjct: 195 ---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKY 250
Query: 301 IFRDP--KRFPDMADPLLRK 318
F P K+ + A L+RK
Sbjct: 251 TFELPQWKKVSESAKDLIRK 270
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQL---DRNGMQGNKEFLVEVLMLSLLHHP 134
NFR E +G G F VY+ +G VA+K++ D + + + E+ +L L+HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYL 194
N++ + ++ +V E G + + + K+ + T K LE++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 195 HDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
H + V++RD+K +N+ + A KL D GL + K ++GT Y +PE
Sbjct: 153 HSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYMSPER 207
Query: 255 ARSGELTVKSDVYSFGVILLEL 276
KSD++S G +L E+
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEM 229
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS--NGQV---VAVKQLDRNG-MQGNKEFLVEVLMLSLLHHPNLVN 138
LG+G FG VY+G + G+ VAVK ++ + ++ EFL E ++ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDV------NETKKPLDWTTRMKIASGAAQGLE 192
L+G + G L+V E M+ G + +L + N + P +++A+ A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
YL+ K ++RDL + N ++ + K+ DFG+ + + + + + + AP
Sbjct: 142 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E + G T SD++SFGV+L E+ +
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 49/311 (15%)
Query: 64 AQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNG-M 115
A + E A + LG+G FG VY+G + G V VA+K ++ M
Sbjct: 5 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASM 62
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVN 169
+ EFL E ++ + ++V L+G + G L++ E M+ G + +L ++ N
Sbjct: 63 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 122
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
P + +++A A G+ YL+ AN ++RDL + N ++ + K+ DFG+ +
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 230 LGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT-------GRRV 282
+ + + + + +PE + G T SDV+SFGV+L E+ T G
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 239
Query: 283 IDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGA 342
R V E L+ P PDM L+R MC Q
Sbjct: 240 EQVLRFVMEGGLLD-------KPDNCPDMLFELMR----------------MCWQYNPKM 276
Query: 343 RPLMSDVVTAL 353
RP ++++++
Sbjct: 277 RPSFLEIISSI 287
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 49/290 (16%)
Query: 85 LGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNG-MQGNKEFLVEVLMLSLLHHPNL 136
LG+G FG VY+G + G V VA+K ++ M+ EFL E ++ + ++
Sbjct: 20 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVNETKKPLDWTTRMKIASGAAQG 190
V L+G + G L++ E M+ G + +L ++ N P + +++A A G
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
+ YL+ AN ++RDL + N ++ + K+ DFG+ + + + + + +
Sbjct: 138 MAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 251 APEYARSGELTVKSDVYSFGVILLELIT-------GRRVIDTTRPVDEQNLIAWAQPIFR 303
+PE + G T SDV+SFGV+L E+ T G R V E L+
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD------- 247
Query: 304 DPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTAL 353
P PDM L+R MC Q RP ++++++
Sbjct: 248 KPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSI 281
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+GEG G V + +G+ VAVK +D Q + EV+++ H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
G++ ++ EF+ GG++ D + V ++ + + Q L YLH + VI+
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEEQI-----ATVCEAVLQALAYLHAQG---VIH 164
Query: 205 RDLKSSNILLGANLDPKLSDFGL-AKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
RD+KS +ILL + KLSDFG A++ K ++GT + APE +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK---RKXLVGTPYWMAPEVISRSLYATE 221
Query: 264 SDVYSFGVILLELITG 279
D++S G++++E++ G
Sbjct: 222 VDIWSLGIMVIEMVDG 237
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS--NGQV---VAVKQLDRNG-MQGNKEFLVEVLMLSLLHHPNLVN 138
LG+G FG VY+G + G+ VAVK ++ + ++ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDV------NETKKPLDWTTRMKIASGAAQGLE 192
L+G + G L+V E M+ G + +L + N + P +++A+ A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
YL+ K ++RDL + N ++ + K+ DFG+ + + + + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E + G T SD++SFGV+L E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS--NGQV---VAVKQLDRNG-MQGNKEFLVEVLMLSLLHHPNLVN 138
LG+G FG VY+G + G+ VAVK ++ + ++ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDV------NETKKPLDWTTRMKIASGAAQGLE 192
L+G + G L+V E M+ G + +L + N + P +++A+ A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
YL+ K ++RDL + N ++ + K+ DFG+ + + + + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E + G T SD++SFGV+L E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 49/311 (15%)
Query: 64 AQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNG-M 115
A + E A + LG+G FG VY+G + G V VA+K ++ M
Sbjct: 34 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASM 91
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVN 169
+ EFL E ++ + ++V L+G + G L++ E M+ G + +L ++ N
Sbjct: 92 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 151
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
P + +++A A G+ YL+ AN ++RDL + N ++ + K+ DFG+ +
Sbjct: 152 PVLAPPSLSKMIQMAGEIADGMAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 208
Query: 230 LGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT-------GRRV 282
+ + + + + +PE + G T SDV+SFGV+L E+ T G
Sbjct: 209 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 268
Query: 283 IDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGA 342
R V E L+ P PDM L+R MC Q
Sbjct: 269 EQVLRFVMEGGLLD-------KPDNCPDMLFELMR----------------MCWQYNPKM 305
Query: 343 RPLMSDVVTAL 353
RP ++++++
Sbjct: 306 RPSFLEIISSI 316
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L++ + M G + D++ + + ++ L+W ++ A+
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFG AKL EK +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S L+H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 133/296 (44%), Gaps = 48/296 (16%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVE--VLMLSLLHHPNLVNLI- 140
L+G G +G VYKG+L + + VAVK + F+ E + + L+ H N+ I
Sbjct: 20 LIGRGRYGAVYKGSL--DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 141 ---GYCADGD-QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH- 195
ADG + LLV E+ GS+ +L + DW + ++A +GL YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRGLAYLHT 129
Query: 196 -----DKANPPVIYRDLKSSNILLGANLDPKLSDFGLA------KLGPQGEKMNVTSRVM 244
D P + +RDL S N+L+ + +SDFGL+ +L GE+ N +
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 245 GTYGYCAPEY------ARSGELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLIAW 297
GT Y APE R E +K D+Y+ G+I E+ + V E + A+
Sbjct: 190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM-AF 248
Query: 298 AQPIFRDPKRFPDMADPLLRK----QFPEKGLNEAVAIAAM------CLQEEAGAR 343
+ P F DM + R+ +FPE ++A+ ++ C ++A AR
Sbjct: 249 QTEVGNHPT-FEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEAR 303
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G+G FG V G + N VAVK + + + FL E +++ L H NLV L+G
Sbjct: 201 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 145 DGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+ L +V E+M+ GS+ D+L + + L +K + + +EYL +
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 311
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RDL + N+L+ + K+SDFGL K + T ++ + APE R + + K
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTK 366
Query: 264 SDVYSFGVILLELITGRRV 282
SDV+SFG++L E+ + RV
Sbjct: 367 SDVWSFGILLWEIYSFGRV 385
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L++ + M G + D++ + + ++ L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFG AKL EK +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L++ + M G + D++ + + ++ L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFG AKL EK +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +L G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L++ + M G + D++ + + ++ L+W ++ A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 136/313 (43%), Gaps = 67/313 (21%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
+F++ L+G GGFG+V+K + +G+ ++++ N + +E V L+ L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 138 NLIGYCADG--------DQRL----------------------LVYEFMSGGSVDDHLLD 167
+ G C DG D L + EF G+++ +
Sbjct: 69 HYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 168 VNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGL 227
K LD +++ +G++Y+H K +I+RDLK SNI L K+ DFGL
Sbjct: 128 RRGEK--LDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGL 182
Query: 228 A-KLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTT 286
L G++ +R GT Y +PE S + + D+Y+ G+IL EL+ V DT
Sbjct: 183 VTSLKNDGKR----TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTA 235
Query: 287 RPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLM 346
F K F D+ D ++ F +K E + + L ++ RP
Sbjct: 236 ---------------FETSKFFTDLRDGIISDIFDKK---EKTLLQKL-LSKKPEDRPNT 276
Query: 347 SDVVTALSFLSNS 359
S+++ L+ S
Sbjct: 277 SEILRTLTVWKKS 289
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 132/311 (42%), Gaps = 49/311 (15%)
Query: 64 AQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNG-M 115
A + E A + LG+G FG VY+G + G V VA+K ++ M
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASM 69
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDV------N 169
+ EFL E ++ + ++V L+G + G L++ E M+ G + +L + N
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 129
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
P + +++A A G+ YL+ AN ++RDL + N ++ + K+ DFG+ +
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 230 LGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT-------GRRV 282
+ + + + + +PE + G T SDV+SFGV+L E+ T G
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246
Query: 283 IDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGA 342
R V E L+ P PDM L+R MC Q
Sbjct: 247 EQVLRFVMEGGLL-------DKPDNCPDMLFELMR----------------MCWQYNPKM 283
Query: 343 RPLMSDVVTAL 353
RP ++++++
Sbjct: 284 RPSFLEIISSI 294
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+ +L + + NKE L E +++ +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 110 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 162
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 163 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 132/311 (42%), Gaps = 49/311 (15%)
Query: 64 AQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNG-M 115
A + E A + LG+G FG VY+G + G V VA+K ++ M
Sbjct: 2 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASM 59
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDV------N 169
+ EFL E ++ + ++V L+G + G L++ E M+ G + +L + N
Sbjct: 60 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 119
Query: 170 ETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK 229
P + +++A A G+ YL+ AN ++RDL + N ++ + K+ DFG+ +
Sbjct: 120 PVLAPPSLSKMIQMAGEIADGMAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 176
Query: 230 LGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT-------GRRV 282
+ + + + + +PE + G T SDV+SFGV+L E+ T G
Sbjct: 177 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 236
Query: 283 IDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGA 342
R V E L+ P PDM L+R MC Q
Sbjct: 237 EQVLRFVMEGGLL-------DKPDNCPDMLFELMR----------------MCWQYNPKM 273
Query: 343 RPLMSDVVTAL 353
RP ++++++
Sbjct: 274 RPSFLEIISSI 284
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +L G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +L G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFGLAKL EK +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFG AKL EK +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFG AKL EK +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G+G FG V G + N VAVK + + + FL E +++ L H NLV L+G
Sbjct: 14 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 145 DGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+ L +V E+M+ GS+ D+L + + L +K + + +EYL +
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 124
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RDL + N+L+ + K+SDFGL K + T ++ + APE R + + K
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTK 179
Query: 264 SDVYSFGVILLELITGRRV 282
SDV+SFG++L E+ + RV
Sbjct: 180 SDVWSFGILLWEIYSFGRV 198
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 111/251 (44%), Gaps = 34/251 (13%)
Query: 88 GGFGRVYKGTLQSNGQVVAVKQL---DRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
G FG V+K L + + VAVK D+ Q EV L + H N++ IG
Sbjct: 35 GRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNE----YEVYSLPGMKHENILQFIGAEK 88
Query: 145 DGDQ----RLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH----- 195
G L+ F GS+ D L + W IA A+GL YLH
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 196 --DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
D P + +RD+KS N+LL NL ++DFGLA G+ T +GT Y APE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 254 YARSG-----ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRF 308
+ ++ D+Y+ G++L EL + R PVDE ++ + + I + P
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELAS--RCTAADGPVDEY-MLPFEEEIGQHPS-L 259
Query: 309 PDMADPLLRKQ 319
DM + ++ K+
Sbjct: 260 EDMQEVVVHKK 270
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G+G FG V G + N VAVK + + + FL E +++ L H NLV L+G
Sbjct: 20 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 145 DGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+ L +V E+M+ GS+ D+L + + L +K + + +EYL +
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 130
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RDL + N+L+ + K+SDFGL K + T ++ + APE R + K
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREAAFSTK 185
Query: 264 SDVYSFGVILLELITGRRV 282
SDV+SFG++L E+ + RV
Sbjct: 186 SDVWSFGILLWEIYSFGRV 204
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G+G FG V G + N VAVK + + + FL E +++ L H NLV L+G
Sbjct: 29 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 145 DGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+ L +V E+M+ GS+ D+L + + L +K + + +EYL +
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 139
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RDL + N+L+ + K+SDFGL K + T ++ + APE R + + K
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTK 194
Query: 264 SDVYSFGVILLELITGRRV 282
SDV+SFG++L E+ + RV
Sbjct: 195 SDVWSFGILLWEIYSFGRV 213
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S +H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S +H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVV----AVKQL-DRNGMQGNKEFLVEVLMLSLLH 132
F++ +LG G FG VYKG G+ V A+K+L + + NKE L E +++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE---TKKPLDWTTRMKIASGAAQ 189
+P++ L+G C +L+ + M G + D++ + + ++ L+W ++ A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
G+ YL D+ +++RDL + N+L+ K++DFG AKL EK +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
A E T +SDV+S+GV + EL+T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG L D E + + G+ YLH +
Sbjct: 73 REGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 125
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 186 PVDVWSCGIVLTAMLAG 202
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S +H N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 85 LGEGGFGRVYKGTLQSNGQ-----VVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + T G+ VAVK L KE L+ L M L H N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHL--------------------LDVNETKKPLDW 177
NL+G C G L++ E+ G + + L LD E +PL+
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLD-KEDGRPLEL 157
Query: 178 TTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKM 237
+ +S AQG+ +L A+ I+RD+ + N+LL K+ DFGLA+
Sbjct: 158 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 214
Query: 238 NVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
V + APE TV+SDV+S+G++L E+ +
Sbjct: 215 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S +H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 127
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + ++L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 127
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 71 ELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-------RNGMQGNKEFLV 123
++ + K + + LGEG F VYK ++ Q+VA+K++ ++G+ N+ L
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGI--NRTALR 61
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
E+ +L L HPN++ L+ LV++FM ++ + D + P M +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
QGLEYLH +++RDLK +N+LL N KL+DFGLAK G
Sbjct: 121 T---LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYXHQ 172
Query: 244 MGTYGYCAPEYARSGELT-VKSDVYSFGVILLELI 277
+ T Y APE + V D+++ G IL EL+
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S +H N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG L D E + + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S +H N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S +H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S +H N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG L D E + + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG L D E + + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS--NGQV---VAVKQLDRNG-MQGNKEFLVEVLMLSLLHHPNLVN 138
LG+G FG VY+G + G+ VAVK ++ + ++ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDV------NETKKPLDWTTRMKIASGAAQGLE 192
L+G + G L+V E M+ G + +L + N + P +++A+ A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
YL+ K ++RDL + N ++ + K+ DFG+ + + + + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E + G T SD++SFGV+L E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S +H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG L D E + + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS--NGQV---VAVKQLDRNG-MQGNKEFLVEVLMLSLLHHPNLVN 138
LG+G FG VY+G + G+ VAVK ++ + ++ EFL E ++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDV------NETKKPLDWTTRMKIASGAAQGLE 192
L+G + G L+V E M+ G + +L + N + P +++A+ A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
YL+ K ++RDL + N ++ + K+ DFG+ + + + + + + AP
Sbjct: 144 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E + G T SD++SFGV+L E+ +
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 127
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 127
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 127
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V++ T ++ G A K + + E+ +S+L HP LVNL
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
D ++ +++YEFMSGG + + + D + + M+ +GL ++H+ ++
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR---QVCKGLCHMHENN---YVH 172
Query: 205 RDLKSSNILLGANL--DPKLSDFGL-AKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
DLK NI+ + KL DFGL A L P+ + + VT+ GT + APE A +
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTT---GTAEFAAPEVAEGKPVG 228
Query: 262 VKSDVYSFGVILLELITG 279
+D++S GV+ L++G
Sbjct: 229 YYTDMWSVGVLSYILLSG 246
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V++ T ++ G A K + + E+ +S+L HP LVNL
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
D ++ +++YEFMSGG + + + D + + M+ +GL ++H+ ++
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR---QVCKGLCHMHENN---YVH 278
Query: 205 RDLKSSNILLGANL--DPKLSDFGL-AKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
DLK NI+ + KL DFGL A L P+ + + VT+ GT + APE A +
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTT---GTAEFAAPEVAEGKPVG 334
Query: 262 VKSDVYSFGVILLELITG 279
+D++S GV+ L++G
Sbjct: 335 YYTDMWSVGVLSYILLSG 352
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S +H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG L D E + + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG L D E + + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG +G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 49/290 (16%)
Query: 85 LGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNG-MQGNKEFLVEVLMLSLLHHPNL 136
LG+G FG VY+G + G V VA+K ++ M+ EFL E ++ + ++
Sbjct: 20 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVNETKKPLDWTTRMKIASGAAQG 190
V L+G + G L++ E M+ G + +L ++ N P + +++A A G
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
+ YL+ AN ++RDL + N + + K+ DFG+ + + + + + +
Sbjct: 138 MAYLN--ANK-FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 251 APEYARSGELTVKSDVYSFGVILLELIT-------GRRVIDTTRPVDEQNLIAWAQPIFR 303
+PE + G T SDV+SFGV+L E+ T G R V E L+
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD------- 247
Query: 304 DPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTAL 353
P PDM L+R MC Q RP ++++++
Sbjct: 248 KPDNCPDMLLELMR----------------MCWQYNPKMRPSFLEIISSI 281
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHH- 133
+F ++G GGFG VY G++ A+K LD+ + QG L E +MLSL+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 134 --PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQG 190
P +V + D+ + + M+GG + HL ++ + M+ A+ G
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 304
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA----KLGPQGEKMNVTSRVMGT 246
LE++H++ V+YRDLK +NILL + ++SD GLA K P +GT
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VGT 353
Query: 247 YGYCAPEYARSG-ELTVKSDVYSFGVILLELITG 279
+GY APE + G +D +S G +L +L+ G
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHH- 133
+F ++G GGFG VY G++ A+K LD+ + QG L E +MLSL+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 134 --PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQG 190
P +V + D+ + + M+GG + HL ++ + M+ A+ G
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 304
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA----KLGPQGEKMNVTSRVMGT 246
LE++H++ V+YRDLK +NILL + ++SD GLA K P +GT
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VGT 353
Query: 247 YGYCAPEYARSG-ELTVKSDVYSFGVILLELITG 279
+GY APE + G +D +S G +L +L+ G
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHH- 133
+F ++G GGFG VY G++ A+K LD+ + QG L E +MLSL+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 134 --PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQG 190
P +V + D+ + + M+GG + HL ++ + M+ A+ G
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 304
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA----KLGPQGEKMNVTSRVMGT 246
LE++H++ V+YRDLK +NILL + ++SD GLA K P +GT
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VGT 353
Query: 247 YGYCAPEYARSG-ELTVKSDVYSFGVILLELITG 279
+GY APE + G +D +S G +L +L+ G
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHH- 133
+F ++G GGFG VY G++ A+K LD+ + QG L E +MLSL+
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 134 --PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQG 190
P +V + D+ + + M+GG + HL ++ + M+ A+ G
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 303
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA----KLGPQGEKMNVTSRVMGT 246
LE++H++ V+YRDLK +NILL + ++SD GLA K P +GT
Sbjct: 304 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VGT 352
Query: 247 YGYCAPEYARSG-ELTVKSDVYSFGVILLELITG 279
+GY APE + G +D +S G +L +L+ G
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 124/284 (43%), Gaps = 47/284 (16%)
Query: 84 LLGEGGFGRVYKGTL-QSNGQV--VAVK--QLDRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
+LGEG FG V +G L Q +G VAVK +LD + + +EFL E + HPN++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 139 LIGYCADGDQR-----LLVYEFMSGGSVDDHLL--DVNETKKPLDWTTRMKIASGAAQGL 191
L+G C + + +++ FM G + +LL + K + T +K A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 192 EYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
EYL +N ++RDL + N +L ++ ++DFGL+K G+ + A
Sbjct: 161 EYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 252 PEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP-- 309
E T KSDV++FGV + E+ T R +P
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT------------------------RGMTPYPGV 253
Query: 310 ---DMADPLL---RKQFPEKGLNEAVAIAAMCLQEEAGARPLMS 347
+M D LL R + PE L+E I C + + RP S
Sbjct: 254 QNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFS 297
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS--NGQV---VAVKQLDRNG-MQGNKEFLVEVLMLSLLHHPNLVN 138
LG+G FG VY+G + G+ VAVK ++ + ++ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDV------NETKKPLDWTTRMKIASGAAQGLE 192
L+G + G L+V E M+ G + +L + N + P +++A+ A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
YL+ K ++RDL + N ++ + K+ DFG+ + + + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E + G T SD++SFGV+L E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 124/285 (43%), Gaps = 30/285 (10%)
Query: 79 FRQECLLGEGGFGRVYKGTLQSNGQ----VVAVKQLDRN-GMQGNKEFLVEVLMLSLLHH 133
R+ +LG G FG VYKG +G+ VA+K L N + NKE L E +++ +
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P + L+G C +L V + M G + DH V E + L + A+G+ Y
Sbjct: 79 PYVSRLLGICLTSTVQL-VTQLMPYGCLLDH---VRENRGRLGSQDLLNWCMQIAKGMSY 134
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
L D +++RDL + N+L+ + K++DFGLA+L E + A E
Sbjct: 135 LEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 254 YARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKR-FPDMA 312
T +SDV+S+GV + EL+T A+P P R PD+
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFG-----------------AKPYDGIPAREIPDLL 234
Query: 313 DPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALSFLS 357
+ R P + I C ++ RP ++V+ S ++
Sbjct: 235 EKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMA 279
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S +H N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS-----NGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
LG G FG VY+G + + VAVK L + Q +FL+E L++S +H N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKP--LDWTTRMKIASGAAQGLEYLH 195
IG R ++ E M+GG + L + +P L + +A A G +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 196 DKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+ I+RD+ + N LL G K+ DFG+A+ + M + P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E G T K+D +SFGV+L E+ +
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 29/225 (12%)
Query: 88 GGFGRVYKGTLQSNGQVVAVKQL-DRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCADG 146
G FG V+K L ++ V + L D+ Q +E + + H NL+ I G
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSERE----IFSTPGMKHENLLQFIAAEKRG 81
Query: 147 D----QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA---- 198
+ L+ F GS+ D+L + W +A ++GL YLH+
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 199 ----NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
P + +RD KS N+LL ++L L+DFGLA G+ T +GT Y APE
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV 196
Query: 255 ARSG-----ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNL 294
+ ++ D+Y+ G++L EL++ + D PVDE L
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADG--PVDEYML 239
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 16/232 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+G GGF +V G++VA+K +D+N + + E+ L L H ++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
++ +V E+ GG + D+++ + + +I S A Y+H +
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVA----YVHSQGYA--- 130
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR-SGELTV 262
+RDLK N+L KL DFGL P+G K G+ Y APE + L
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGS 189
Query: 263 KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
++DV+S G++L L+ G P D+ N++A + I R P P
Sbjct: 190 EADVWSMGILLYVLMCG------FLPFDDDNVMALYKKIMRGKYDVPKWLSP 235
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 13/221 (5%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE-TKKPLDWTTRMKIASGAAQGL 191
HPN+V L+ ++ LV+EF+S D +D + T PL QGL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKD--FMDASALTGIPLPLIKSYLFQ--LLQGL 119
Query: 192 EYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
+ H V++RDLK N+L+ KL+DFGLA+ G + + T Y A
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 174
Query: 252 PEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
PE + + D++S G I E++T R + +D+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 13/221 (5%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE-TKKPLDWTTRMKIASGAAQGL 191
HPN+V L+ ++ LV+EF+S D +D + T PL QGL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKD--FMDASALTGIPLPLIKSYLFQ--LLQGL 118
Query: 192 EYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
+ H V++RDLK N+L+ KL+DFGLA+ G + + T Y A
Sbjct: 119 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 173
Query: 252 PEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
PE + + D++S G I E++T R + +D+
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 214
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 115/263 (43%), Gaps = 33/263 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFL-VEVLMLSLLHHPNLVNLIGYC 143
LG G FG V+ +S+G +K ++++ Q E + E+ +L L HPN++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
D +V E GG + + ++ K L ++ L Y H + V+
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VV 146
Query: 204 YRDLKSSNILLGANLDP----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++DLK NIL + P K+ DFGLA+L E ++ GT Y APE + +
Sbjct: 147 HKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVFKR-D 201
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTT--------------------RPVDEQNLIAWAQ 299
+T K D++S GV++ L+TG T RP+ Q + Q
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQ 261
Query: 300 PIFRDPKRFPDMADPLLRKQFPE 322
+ +DP+R P A L + F +
Sbjct: 262 MLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQ-----VVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + T G+ VAVK L KE L+ L M L H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHL---------LDVNETKKP---LDWTTRMKIAS 185
NL+G C G L++ E+ G + + L N + P L + +S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 186 GAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMG 245
AQG+ +L A+ I+RD+ + N+LL K+ DFGLA+ V
Sbjct: 174 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 246 TYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE TV+SDV+S+G++L E+ +
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 30/263 (11%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + N ++A+K QL++ G++ + E+ + S L HPN++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 80
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
Y D + L+ EF G + L + D A L Y H++
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHERK- 135
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM-GTYGYCAPEYARSG 258
VI+RD+K N+L+G + K++DFG + P ++ R M GT Y PE
Sbjct: 136 --VIHRDIKPENLLMGYKGELKIADFGWSVHAP-----SLRRRXMCGTLDYLPPEMIEGK 188
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQ----PIFRDPKRFPDMADP 314
K D++ GV+ E + G D+ + I P D + D+
Sbjct: 189 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK--DLISK 246
Query: 315 LLR----KQFPEKGLNEAVAIAA 333
LLR ++ P KG+ E + A
Sbjct: 247 LLRYHPPQRLPLKGVMEHPWVKA 269
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 30/263 (11%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + N ++A+K QL++ G++ + E+ + S L HPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 79
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
Y D + L+ EF G + L + D A L Y H++
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHERK- 134
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM-GTYGYCAPEYARSG 258
VI+RD+K N+L+G + K++DFG + P ++ R M GT Y PE
Sbjct: 135 --VIHRDIKPENLLMGYKGELKIADFGWSVHAP-----SLRRRXMCGTLDYLPPEMIEGK 187
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQ----PIFRDPKRFPDMADP 314
K D++ GV+ E + G D+ + I P D + D+
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK--DLISK 245
Query: 315 LLR----KQFPEKGLNEAVAIAA 333
LLR ++ P KG+ E + A
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWVKA 268
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLI 140
+LG+G FG+V + ++ AVK L ++ + + + +VE +L+L P + +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 141 GYCADGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
C RL V E+++GG + H+ V K+P + A+ A GL +L K
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQSKG- 462
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM-GTYGYCAPEYARSG 258
+IYRDLK N++L + K++DFG+ K + VT++ GT Y APE
Sbjct: 463 --IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 259 ELTVKSDVYSFGVILLELITGR 280
D ++FGV+L E++ G+
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 30/263 (11%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + N ++A+K QL++ G++ + E+ + S L HPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 79
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
Y D + L+ EF G + L + D A L Y H++
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHERK- 134
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM-GTYGYCAPEYARSG 258
VI+RD+K N+L+G + K++DFG + P ++ R M GT Y PE
Sbjct: 135 --VIHRDIKPENLLMGYKGELKIADFGWSVHAP-----SLRRRXMCGTLDYLPPEMIEGK 187
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQ----PIFRDPKRFPDMADP 314
K D++ GV+ E + G D+ + I P D + D+
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK--DLISK 245
Query: 315 LLR----KQFPEKGLNEAVAIAA 333
LLR ++ P KG+ E + A
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWVKA 268
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS--NGQV---VAVKQLDRNG-MQGNKEFLVEVLMLSLLHHPNLVN 138
LG+G FG VY+G + G+ VAVK ++ + ++ EFL E ++ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDV------NETKKPLDWTTRMKIASGAAQGLE 192
L+G + G L+V E M+ G + +L + N + P +++A+ A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
YL+ K ++R+L + N ++ + K+ DFG+ + + + + + + AP
Sbjct: 146 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E + G T SD++SFGV+L E+ +
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 85 LGEGGFGRVYKGTLQS--NGQV---VAVKQLDRNG-MQGNKEFLVEVLMLSLLHHPNLVN 138
LG+G FG VY+G + G+ VAVK ++ + ++ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDV------NETKKPLDWTTRMKIASGAAQGLE 192
L+G + G L+V E M+ G + +L + N + P +++A+ A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
YL+ K ++R+L + N ++ + K+ DFG+ + + + + + + AP
Sbjct: 145 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 253 EYARSGELTVKSDVYSFGVILLELIT 278
E + G T SD++SFGV+L E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQ-----VVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + T G+ VAVK L KE L+ L M L H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLL---DVNETKKPL-----DWTTR--MKIASGA 187
NL+G C G L++ E+ G + + L V ET +TR + +S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY 247
AQG+ +L A+ I+RD+ + N+LL K+ DFGLA+ V
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 248 GYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE TV+SDV+S+G++L E+ +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG G V + + VAVK +D + + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G+ + L E+ SGG + D + +P + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG---IT 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RD+K N+LL + K+SDFGLA + + + +++ GT Y APE + E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 264 S-DVYSFGVILLELITG 279
DV+S G++L ++ G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQ--GNKEFLVEVLMLSLLHHPNLVNLIGY 142
LG G +G V + A+K + + + N + L EV +L LL HPN++ L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 143 CADGDQRLLVYEFMSGGSVDD---HLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
D LV E GG + D H + NE + I G+ YLH K N
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-------IIKQVLSGVTYLH-KHN 156
Query: 200 PPVIYRDLKSSNILLGANLDP---KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+++RDLK N+LL + K+ DFGL+ + +KM +GT Y APE R
Sbjct: 157 --IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK---ERLGTAYYIAPEVLR 211
Query: 257 SGELTVKSDVYSFGVILLELITG 279
+ K DV+S GVIL L+ G
Sbjct: 212 K-KYDEKCDVWSIGVILFILLAG 233
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQ-----VVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + T G+ VAVK L KE L+ L M L H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 138 NLIGYCADGDQRLLVYEFMSGGSV-------------DDHLLDVNETKKPLDWTTRMKIA 184
NL+G C G L++ E+ G + D N T D + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD---LLHFS 170
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
S AQG+ +L A+ I+RD+ + N+LL K+ DFGLA+ V
Sbjct: 171 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 245 GTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE TV+SDV+S+G++L E+ +
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 110/223 (49%), Gaps = 22/223 (9%)
Query: 82 ECL--LGEGGFGRVYKGT-LQSNGQVVAVK----QLDRNGMQGNKEFLVEVL-MLSLLHH 133
EC+ +GEG +G+V+K L++ G+ VA+K Q GM + V VL L H
Sbjct: 14 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 134 PNLVNLIGYCA----DGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAA 188
PN+V L C D + +L LV+E + + +L V E P + M
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQ--LL 130
Query: 189 QGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYG 248
+GL++LH V++RDLK NIL+ ++ KL+DFGLA++ +M +TS V+ T
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTS-VVVTLW 184
Query: 249 YCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE D++S G I E+ + + + VD+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ 227
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 117/260 (45%), Gaps = 19/260 (7%)
Query: 67 FTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQ--GNKEFLV- 123
F A + ++ + +LG+G FG V + GQ AVK + + ++ +KE L+
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L L HPN+ L + D LV E +GG + D ++ ++K +I
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARI 131
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGA---NLDPKLSDFGLAKLGPQGEKMNVT 240
G+ Y H +++RDLK N+LL + + + ++ DFGL+ E
Sbjct: 132 IRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKX 185
Query: 241 SRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQP 300
+GT Y APE G K DV+S GVIL L++G + D + +
Sbjct: 186 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKY 244
Query: 301 IFRDP--KRFPDMADPLLRK 318
F P K+ + A L+RK
Sbjct: 245 TFELPQWKKVSESAKDLIRK 264
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 45/291 (15%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVN 138
LGEG FG+V K T ++ VAVK L N ++ L E +L ++HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNET--------------------KKPLDWT 178
L G C+ LL+ E+ GS+ L + + ++ L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 179 TRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN 238
+ A +QG++YL A +++RDL + NIL+ K+SDFGL++ + +
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 239 VTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWA 298
S+ + A E T +SDV+SFGV+L E++T + P
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---LGGNPYP---------G 255
Query: 299 QPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDV 349
P P+R ++ R + P+ E + C ++E RP+ +D+
Sbjct: 256 IP----PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 23/216 (10%)
Query: 77 KNFRQEC-----LLGEGGFGRVY---KGTLQSNGQVVAVKQLDRNGMQGNKE----FLVE 124
+ R EC +LG+GG+G+V+ K T + G++ A+K L + + N + E
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 125 VLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA 184
+L + HP +V+LI G + L+ E++SGG + + + ++ T +A
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLA 128
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
+ L +LH K +IYRDLK NI+L KL+DFGL K VT
Sbjct: 129 E-ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFC 182
Query: 245 GTYGYCAPE-YARSGELTVKSDVYSFGVILLELITG 279
GT Y APE RSG D +S G ++ +++TG
Sbjct: 183 GTIEYMAPEILMRSGH-NRAVDWWSLGALMYDMLTG 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 23/216 (10%)
Query: 77 KNFRQEC-----LLGEGGFGRVY---KGTLQSNGQVVAVKQLDRNGMQGNKE----FLVE 124
+ R EC +LG+GG+G+V+ K T + G++ A+K L + + N + E
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 125 VLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA 184
+L + HP +V+LI G + L+ E++SGG + + + ++ T +A
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLA 128
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
+ L +LH K +IYRDLK NI+L KL+DFGL K VT
Sbjct: 129 E-ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFC 182
Query: 245 GTYGYCAPE-YARSGELTVKSDVYSFGVILLELITG 279
GT Y APE RSG D +S G ++ +++TG
Sbjct: 183 GTIEYMAPEILMRSGH-NRAVDWWSLGALMYDMLTG 217
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 45/291 (15%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVN 138
LGEG FG+V K T ++ VAVK L N ++ L E +L ++HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNET--------------------KKPLDWT 178
L G C+ LL+ E+ GS+ L + + ++ L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 179 TRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN 238
+ A +QG++YL A +++RDL + NIL+ K+SDFGL++ + +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 239 VTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWA 298
S+ + A E T +SDV+SFGV+L E++T + P
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---LGGNPYP---------G 255
Query: 299 QPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDV 349
P P+R ++ R + P+ E + C ++E RP+ +D+
Sbjct: 256 IP----PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 13/221 (5%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE-TKKPLDWTTRMKIASGAAQGL 191
HPN+V L+ ++ LV+EF+ D +D + T PL QGL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKD--FMDASALTGIPLPLIKSYLFQ--LLQGL 116
Query: 192 EYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
+ H V++RDLK N+L+ KL+DFGLA+ G + + T Y A
Sbjct: 117 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 171
Query: 252 PEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
PE + + D++S G I E++T R + +D+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 45/291 (15%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVN 138
LGEG FG+V K T ++ VAVK L N ++ L E +L ++HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNET--------------------KKPLDWT 178
L G C+ LL+ E+ GS+ L + + ++ L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 179 TRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN 238
+ A +QG++YL A +++RDL + NIL+ K+SDFGL++ + +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 239 VTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWA 298
S+ + A E T +SDV+SFGV+L E++T + P
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---LGGNPYP---------G 255
Query: 299 QPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDV 349
P P+R ++ R + P+ E + C ++E RP+ +D+
Sbjct: 256 IP----PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 29/221 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQV-----VAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNL 136
+LG G FG+V T + VAVK L +E L+ L M L H N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHL-------------------LDVNETKKPLDW 177
VNL+G C L++E+ G + ++L L+ E L +
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 178 TTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKM 237
+ A A+G+E+L K+ ++RDL + N+L+ K+ DFGLA+
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 238 NVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
V + APE G T+KSDV+S+G++L E+ +
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHP 134
+F +LG+G FG+V + ++ AVK L ++ + + + +VE +L+L P
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 135 NLVNLIGYCADGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
+ + C RL V E+++GG + H+ V K+P + A+ A GL +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFF 136
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM-GTYGYCAP 252
L K +IYRDLK N++L + K++DFG+ K + VT++ GT Y AP
Sbjct: 137 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAP 190
Query: 253 EYARSGELTVKSDVYSFGVILLELITGR 280
E D ++FGV+L E++ G+
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L +C D++L F + + LL D T + LEY
Sbjct: 97 PFFVKLY-FCFQDDEKLY---FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 152
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 153 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 13/221 (5%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE-TKKPLDWTTRMKIASGAAQGL 191
HPN+V L+ ++ LV+EF+S +D + T PL QGL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDL--KKFMDASALTGIPLPLIKSYLFQ--LLQGL 119
Query: 192 EYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
+ H V++RDLK N+L+ KL+DFGLA+ G + + T Y A
Sbjct: 120 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 174
Query: 252 PEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
PE + + D++S G I E++T R + +D+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 21/236 (8%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLI 140
LLG+G FG+V ++ G+ A+K L + + E L E +L HP L L
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 214
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKAN 199
D+ V E+ +GG + HL +++ + R + + L+YLH + N
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSALDYLHSEKN 269
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM-GTYGYCAPEYARSG 258
V+YRDLK N++L + K++DFGL K +G K T + GT Y APE
Sbjct: 270 --VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYLAPEVLEDN 324
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ D + GV++ E++ GR P Q+ + I + RFP P
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHEKLFELILMEEIRFPRTLGP 374
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 13/221 (5%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE-TKKPLDWTTRMKIASGAAQGL 191
HPN+V L+ ++ LV+EF+S +D + T PL QGL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDL--KKFMDASALTGIPLPLIKSYLFQ--LLQGL 117
Query: 192 EYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
+ H V++RDLK N+L+ KL+DFGLA+ G + + T Y A
Sbjct: 118 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 172
Query: 252 PEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
PE + + D++S G I E++T R + +D+
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 84 LLGEGGFGRVYKGTLQSNGQ---VVAVKQLDR-NGMQGNKEFLVEVLMLSLLHHPNLVNL 139
++G+G FG VY G Q A+K L R MQ + FL E L++ L+HPN++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 140 IGYC--ADGDQRLLVYEFMSGGSVDDHLLDV--NETKKPLDWTTRMKIASGAAQGLEYLH 195
IG +G +L+ +M G + + N T K L + A+G+EYL
Sbjct: 88 IGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDL-----ISFGLQVARGMEYL- 140
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPE 253
A ++RDL + N +L + K++DFGLA+ E +V + A E
Sbjct: 141 --AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 254 YARSGELTVKSDVYSFGVILLELIT 278
++ T KSDV+SFGV+L EL+T
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 110/223 (49%), Gaps = 22/223 (9%)
Query: 82 ECL--LGEGGFGRVYKGT-LQSNGQVVAVK----QLDRNGMQGNKEFLVEVL-MLSLLHH 133
EC+ +GEG +G+V+K L++ G+ VA+K Q GM + V VL L H
Sbjct: 14 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 134 PNLVNLIGYCA----DGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAA 188
PN+V L C D + +L LV+E + + +L V E P + M
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQ--LL 130
Query: 189 QGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYG 248
+GL++LH V++RDLK NIL+ ++ KL+DFGLA++ +M +TS V+ T
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTS-VVVTLW 184
Query: 249 YCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE D++S G I E+ + + + VD+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ 227
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 110/223 (49%), Gaps = 22/223 (9%)
Query: 82 ECL--LGEGGFGRVYKGT-LQSNGQVVAVK----QLDRNGMQGNKEFLVEVL-MLSLLHH 133
EC+ +GEG +G+V+K L++ G+ VA+K Q GM + V VL L H
Sbjct: 14 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 134 PNLVNLIGYCA----DGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAA 188
PN+V L C D + +L LV+E + + +L V E P + M
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQ--LL 130
Query: 189 QGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYG 248
+GL++LH V++RDLK NIL+ ++ KL+DFGLA++ +M +TS V+ T
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTS-VVVTLW 184
Query: 249 YCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE D++S G I E+ + + + VD+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ 227
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 22/249 (8%)
Query: 72 LAAATKN-FRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLM 127
+A T N F LLG+G FG+V ++ G+ A+K L + + E L E +
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 128 LSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASG 186
L HP L L D+ V E+ +GG + HL +++ + R + +
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAE 117
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM-G 245
L+YLH + N V+YRDLK N++L + K++DFGL K +G K T + G
Sbjct: 118 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCG 172
Query: 246 TYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDP 305
T Y APE + D + GV++ E++ GR P Q+ + I +
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHEKLFELILMEE 226
Query: 306 KRFPDMADP 314
RFP P
Sbjct: 227 IRFPRTLGP 235
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 21/236 (8%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLI 140
LLG+G FG+V ++ G+ A+K L + + E L E +L HP L L
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 217
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKAN 199
D+ V E+ +GG + HL +++ + R + + L+YLH + N
Sbjct: 218 YSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSALDYLHSEKN 272
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM-GTYGYCAPEYARSG 258
V+YRDLK N++L + K++DFGL K +G K T + GT Y APE
Sbjct: 273 --VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYLAPEVLEDN 327
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ D + GV++ E++ GR P Q+ + I + RFP P
Sbjct: 328 DYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHEKLFELILMEEIRFPRTLGP 377
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+GEG +G VYK S G++VA+K+ LD + E+ +L LHHPN+V+LI
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKANPP 201
LV+EFM +LD N+T +++KI +G+ + H
Sbjct: 88 IHSERCLTLVFEFMEKDL--KKVLDENKTGLQ---DSQIKIYLYQLLRGVAHCHQHR--- 139
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR-SGEL 260
+++RDLK N+L+ ++ KL+DFGLA+ G + + + T Y AP+ S +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 261 TVKSDVYSFGVILLELITGR 280
+ D++S G I E+ITG+
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+GEG +G VYK S G++VA+K+ LD + E+ +L LHHPN+V+LI
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKANPP 201
LV+EFM +LD N+T +++KI +G+ + H
Sbjct: 88 IHSERCLTLVFEFMEKDL--KKVLDENKTGLQ---DSQIKIYLYQLLRGVAHCHQHR--- 139
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR-SGEL 260
+++RDLK N+L+ ++ KL+DFGLA+ G + + + T Y AP+ S +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 261 TVKSDVYSFGVILLELITGR 280
+ D++S G I E+ITG+
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + + T
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 170
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 216
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 110
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + +
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEV 165
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + + T
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 12/207 (5%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAP 252
LH K +I+RDLK NILL ++ +++DFG AK L P+ ++ S V GT Y +P
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSP 203
Query: 253 EYARSGELTVKSDVYSFGVILLELITG 279
E + SD+++ G I+ +L+ G
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + + T
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 173
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 219
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + + T
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 173
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 219
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+GGF + ++ + +V A K + ++ + ++ +E+ + L H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G+ D D +V E S LL++++ +K L G +YLH
Sbjct: 106 GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 159
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RDLK N+ L +L+ K+ DFGLA K+ GE+ V + GT Y APE
Sbjct: 160 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 215
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTT 286
+ + DV+S G I+ L+ G+ +T+
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 166
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+GGF + ++ + +V A K + ++ + ++ +E+ + L H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G+ D D +V E S LL++++ +K L G +YLH
Sbjct: 108 GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 161
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RDLK N+ L +L+ K+ DFGLA K+ GE+ V + GT Y APE
Sbjct: 162 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 217
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTT 286
+ + DV+S G I+ L+ G+ +T+
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 109
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + +
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEV 164
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 109
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + +
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEV 164
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 30/209 (14%)
Query: 84 LLGEGGFGRVY---KGTLQSNGQVVAVKQL--------DRNGMQGNKEFLVEVLMLSLLH 132
+LG+G FG+V+ K + Q+ A+K L DR + ++ LVEV +
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV------N 84
Query: 133 HPNLVNLIGYCADGDQRL-LVYEFMSGGSVDDHL-LDVNETKKPLDWTTRMKIASGAAQG 190
HP +V L Y + +L L+ +F+ GG + L +V T++ + + + A
Sbjct: 85 HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALA 138
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
L++LH +IYRDLK NILL KL+DFGL+K EK + GT Y
Sbjct: 139 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYM 193
Query: 251 APEYARSGELTVKSDVYSFGVILLELITG 279
APE T +D +SFGV++ E++TG
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 111
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + +
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEV 166
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 214
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 112
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + +
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEV 167
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 111
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + +
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEV 166
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 214
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 148
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAP 252
LH K +I+RDLK NILL ++ +++DFG AK L P+ ++ S V GT Y +P
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSP 204
Query: 253 EYARSGELTVKSDVYSFGVILLELITG 279
E SD+++ G I+ +L+ G
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 78 NFRQECLLGEGGFGRVY---KGTLQSNGQVVAVKQLDRNGMQGNKEFL--VEVLMLSLLH 132
+F +LG+G FG+V+ K T +G + A+K L + ++ +E +L+ ++
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 133 HPNLVNLIGYCADGDQRL-LVYEFMSGGSVDDHL-LDVNETKKPLDWTTRMKIASGAAQG 190
HP +V L Y + +L L+ +F+ GG + L +V T++ + + + A G
Sbjct: 89 HPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALG 142
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
L++LH +IYRDLK NILL KL+DFGL+K EK + GT Y
Sbjct: 143 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYM 197
Query: 251 APEYARSGELTVKSDVYSFGVILLELITG 279
APE + +D +S+GV++ E++TG
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 21/236 (8%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLI 140
LLG+G FG+V ++ G+ A+K L + + E L E +L HP L L
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 74
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKAN 199
D+ V E+ +GG + HL +++ + R + + L+YLH + N
Sbjct: 75 YSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSALDYLHSEKN 129
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM-GTYGYCAPEYARSG 258
V+YRDLK N++L + K++DFGL K +G K T + GT Y APE
Sbjct: 130 --VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEVLEDN 184
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ D + GV++ E++ GR P Q+ + I + RFP P
Sbjct: 185 DYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHEKLFELILMEEIRFPRTLGP 234
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 110
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + +
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEV 165
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 111
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + +
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEV 166
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 214
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 21/236 (8%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLI 140
LLG+G FG+V ++ G+ A+K L + + E L E +L HP L L
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 76
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKAN 199
D+ V E+ +GG + HL +++ + R + + L+YLH + N
Sbjct: 77 YSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSALDYLHSEKN 131
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM-GTYGYCAPEYARSG 258
V+YRDLK N++L + K++DFGL K +G K T + GT Y APE
Sbjct: 132 --VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEVLEDN 186
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ D + GV++ E++ GR P Q+ + I + RFP P
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHEKLFELILMEEIRFPRTLGP 236
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNL 136
+FR +LG G F V + ++VA+K + + ++G + + E+ +L + HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNI 78
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTR--MKIASGAAQGLEYL 194
V L G L+ + +SGG + D +++ +T R ++ ++YL
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAVKYL 132
Query: 195 HDKANPPVIYRDLKSSNIL---LGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
HD +++RDLK N+L L + +SDFGL+K+ G +V S GT GY A
Sbjct: 133 HDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGTPGYVA 186
Query: 252 PEYARSGELTVKSDVYSFGVILLELITG 279
PE + D +S GVI L+ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 109
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + +
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEV 164
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNL 136
+FR +LG G F V + ++VA+K + + ++G + + E+ +L + HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTR--MKIASGAAQGLEYL 194
V L G L+ + +SGG + D +++ +T R ++ ++YL
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAVKYL 132
Query: 195 HDKANPPVIYRDLKSSNIL---LGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
HD +++RDLK N+L L + +SDFGL+K+ G +V S GT GY A
Sbjct: 133 HDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGTPGYVA 186
Query: 252 PEYARSGELTVKSDVYSFGVILLELITG 279
PE + D +S GVI L+ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNL 136
+FR +LG G F V + ++VA+K + + ++G + + E+ +L + HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTR--MKIASGAAQGLEYL 194
V L G L+ + +SGG + D +++ +T R ++ ++YL
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAVKYL 132
Query: 195 HDKANPPVIYRDLKSSNIL---LGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
HD +++RDLK N+L L + +SDFGL+K+ G +V S GT GY A
Sbjct: 133 HDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGTPGYVA 186
Query: 252 PEYARSGELTVKSDVYSFGVILLELITG 279
PE + D +S GVI L+ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+GGF + ++ + +V A K + ++ + ++ +E+ + L H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G+ D D +V E S LL++++ +K L G +YLH
Sbjct: 82 GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 135
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RDLK N+ L +L+ K+ DFGLA K+ GE+ V + GT Y APE
Sbjct: 136 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 191
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTT 286
+ + DV+S G I+ L+ G+ +T+
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 110
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + +
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEV 165
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 113
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + +
Sbjct: 114 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEV 168
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 169 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 216
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 112
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + +
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEV 167
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 165
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-------- 184
HPN+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYL 109
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
QGL + H V++RDLK N+L+ KL+DFGLA+ G + +
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEV 164
Query: 245 GTYGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T Y APE + + D++S G I E++T R + +D+
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 165
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNL 136
+F + LG G G V+K + + +G V+A K + + + + E+ +L + P +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 137 VNLIG-YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
V G + +DG+ + + E M GGS+D L + + K++ +GL YL
Sbjct: 129 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLR 183
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN-VTSRVMGTYGYCAPEY 254
+K +++RD+K SNIL+ + + KL DFG++ G+ ++ + + +GT Y +PE
Sbjct: 184 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 236
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVI 283
+ +V+SD++S G+ L+E+ GR I
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 125
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 126 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + T
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVT 167
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 124
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 125 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 30/209 (14%)
Query: 84 LLGEGGFGRVY---KGTLQSNGQVVAVKQL--------DRNGMQGNKEFLVEVLMLSLLH 132
+LG+G FG+V+ K + Q+ A+K L DR + ++ LVEV +
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV------N 85
Query: 133 HPNLVNLIGYCADGDQRL-LVYEFMSGGSVDDHL-LDVNETKKPLDWTTRMKIASGAAQG 190
HP +V L Y + +L L+ +F+ GG + L +V T++ + + + A
Sbjct: 86 HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-----AELALA 139
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
L++LH +IYRDLK NILL KL+DFGL+K EK + GT Y
Sbjct: 140 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYM 194
Query: 251 APEYARSGELTVKSDVYSFGVILLELITG 279
APE T +D +SFGV++ E++TG
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 30/209 (14%)
Query: 84 LLGEGGFGRVY---KGTLQSNGQVVAVKQL--------DRNGMQGNKEFLVEVLMLSLLH 132
+LG+G FG+V+ K + Q+ A+K L DR + ++ LVEV +
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV------N 84
Query: 133 HPNLVNLIGYCADGDQRL-LVYEFMSGGSVDDHL-LDVNETKKPLDWTTRMKIASGAAQG 190
HP +V L Y + +L L+ +F+ GG + L +V T++ + + + A
Sbjct: 85 HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-----AELALA 138
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
L++LH +IYRDLK NILL KL+DFGL+K EK + GT Y
Sbjct: 139 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYM 193
Query: 251 APEYARSGELTVKSDVYSFGVILLELITG 279
APE T +D +SFGV++ E++TG
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
++NL+G C ++ E+ S G++ ++L D+N ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N K++DFGLA+ + T+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPNL 136
+FR +LG G F V + ++VA+K + + ++G + + E+ +L + HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTR--MKIASGAAQGLEYL 194
V L G L+ + +SGG + D +++ +T R ++ ++YL
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAVKYL 132
Query: 195 HDKANPPVIYRDLKSSNIL---LGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
HD +++RDLK N+L L + +SDFGL+K+ G +V S GT GY A
Sbjct: 133 HDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGTPGYVA 186
Query: 252 PEYARSGELTVKSDVYSFGVILLELITG 279
PE + D +S GVI L+ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLH-HPNLVNLIGYC 143
LGEG F K + + Q AVK + + M+ N + E+ L L HPN+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKR-MEANTQ--KEITALKLCEGHPNIVKLHEVF 75
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
D LV E ++GG L + + KK T I + ++HD V+
Sbjct: 76 HDQLHTFLVMELLNGGE----LFERIKKKKHFSETEASYIMRKLVSAVSHMHDVG---VV 128
Query: 204 YRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
+RDLK N+L NL+ K+ DFG A+L P + T T Y APE
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQNGY 186
Query: 261 TVKSDVYSFGVILLELITGR 280
D++S GVIL +++G+
Sbjct: 187 DESCDLWSLGVILYTMLSGQ 206
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPN 135
LGEG FG+V + VAVK L + + + + + E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL---------LDVNETKKPLDWTTRMKIASG 186
++NL+G C ++ E+ S G++ ++L N + P + + + S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 187 A---AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A A+G+EYL A+ I+RDL + N+L+ + K++DFGLA+ + T+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV+L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
++NL+G C ++ E+ S G++ ++L D+N ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N K++DFGLA+ + T+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 122
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 123 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 123
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 124 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 144
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAP 252
LH K +I+RDLK NILL ++ +++DFG AK L P+ ++ S V GT Y +P
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSP 200
Query: 253 EYARSGELTVKSDVYSFGVILLELITG 279
E SD+++ G I+ +L+ G
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 121/229 (52%), Gaps = 21/229 (9%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNL 136
+F + LG G G V K + +G ++A K + + + + E+ +L + P +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 137 VNLIG-YCADGDQRLLVYEFMSGGSVDDHLLDVNETKK-PLDWTTRMKIASGAAQGLEYL 194
V G + +DG+ + + E M GGS+D L E K+ P + ++ IA +GL YL
Sbjct: 77 VGFYGAFYSDGEISICM-EHMDGGSLDQVL---KEAKRIPEEILGKVSIA--VLRGLAYL 130
Query: 195 HDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN-VTSRVMGTYGYCAPE 253
+K +++RD+K SNIL+ + + KL DFG++ G+ ++ + + +GT Y APE
Sbjct: 131 REKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMAPE 183
Query: 254 YARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIA-WAQPI 301
+ +V+SD++S G+ L+EL GR I P D + L A + +P+
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVELAVGRYPIP---PPDAKELEAIFGRPV 229
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 13/221 (5%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE-TKKPLDWTTRMKIASGAAQGL 191
HPN+V L+ ++ LV+EF+ +D + T PL QGL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KTFMDASALTGIPLPLIKSYLFQ--LLQGL 119
Query: 192 EYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
+ H V++RDLK N+L+ KL+DFGLA+ G + + T Y A
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 174
Query: 252 PEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
PE + + D++S G I E++T R + +D+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 148
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYGYCAP 252
LH K +I+RDLK NILL ++ +++DFG AK L P+ ++ + V GT Y +P
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-GTAQYVSP 201
Query: 253 EYARSGELTVKSDVYSFGVILLELITG 279
E SD+++ G I+ +L+ G
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK--EFLVEVLMLSLLHHPNLVNLIGY 142
+GEG FG+ +G+ +K+++ + M + E EV +L+ + HPN+V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETK-------KPLDWTTRMKIASGAAQGLEYLH 195
+ +V ++ GG D +N K + LDW ++ +A L+++H
Sbjct: 92 FEENGSLYIVMDYCEGG---DLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVH 142
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
D+ +++RD+KS NI L + +L DFG+A++ + + +GT Y +PE
Sbjct: 143 DRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEIC 197
Query: 256 RSGELTVKSDVYSFGVILLELITGRRVIDT 285
+ KSD+++ G +L EL T + +
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFEA 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 85 LGEGGFGRVYKGT----LQSNGQV-VAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPNLV 137
LG G FG+V + T ++S+ + VAVK L + +E L+ E+ +LS L +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVNETKKPL--------DWTTRMKI 183
NL+G C G L++ E+ G + + L ++T + D +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
+ A+G+ +L K I+RDL + NILL K+ DFGLA+ V
Sbjct: 174 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFR 303
+ APE + T +SDV+S+G+ L EL + PVD
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------------ 278
Query: 304 DPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVV 350
+F M R PE E I C + RP +V
Sbjct: 279 ---KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+GGF + ++ + +V A K + ++ + ++ +E+ + L H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G+ D D +V E S LL++++ +K L G +YLH
Sbjct: 88 GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 141
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RDLK N+ L +L+ K+ DFGLA K+ GE+ + GT Y APE
Sbjct: 142 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKKG 197
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTT 286
+ + DV+S G I+ L+ G+ +T+
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
++NL+G C ++ E+ S G++ ++L D+N ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N K++DFGLA+ + T+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
++NL+G C ++ E+ S G++ ++L D+N ++ + + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N K++DFGLA+ + T+
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNL 136
+F + LG G G V+K + + +G V+A K + + + + E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 137 VNLIG-YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
V G + +DG+ + + E M GGS+D L + + K++ +GL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLR 121
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN-VTSRVMGTYGYCAPEY 254
+K +++RD+K SNIL+ + + KL DFG++ G+ ++ + + +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 174
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVI 283
+ +V+SD++S G+ L+E+ GR I
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 13/198 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V++ ++ G+V K ++ E+ +++ LHHP L+NL
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
D + +L+ EF+SGG + D + + + M+ A +GL+++H+ + +++
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR---QACEGLKHMHEHS---IVH 172
Query: 205 RDLKSSNILLGANL--DPKLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
D+K NI+ K+ DFGLA KL P E + VT+ T + APE +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPD-EIVKVTT---ATAEFAAPEIVDREPVG 228
Query: 262 VKSDVYSFGVILLELITG 279
+D+++ GV+ L++G
Sbjct: 229 FYTDMWAIGVLGYVLLSG 246
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 150
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
++NL+G C ++ E+ S G++ ++L D+N ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N K++DFGLA+ + T+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+GGF + ++ + +V A K + ++ + ++ +E+ + L H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G+ D D +V E S LL++++ +K L G +YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RDLK N+ L +L+ K+ DFGLA K+ GE+ + GT Y APE
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKKG 193
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTT 286
+ + DV+S G I+ L+ G+ +T+
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 129
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 130 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEV-LMLSLLHHPNLVNLIGY 142
+L EGGF VY+ +G+ A+K+L N + N+ + EV M L HPN+V
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 143 CADGDQR--------LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYL 194
+ G + LL+ E G V+ L E++ PL T +KI + ++++
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVE--FLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 195 HDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA 228
H + PP+I+RDLK N+LL KL DFG A
Sbjct: 153 H-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 85 LGEGGFGRVYKGT----LQSNGQV-VAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPNLV 137
LG G FG+V + T ++S+ + VAVK L + +E L+ E+ +LS L +H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVNETKKPL--------DWTTRMKI 183
NL+G C G L++ E+ G + + L ++T + D +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
+ A+G+ +L K I+RDL + NILL K+ DFGLA+ V
Sbjct: 167 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFR 303
+ APE + T +SDV+S+G+ L EL + PVD
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------------ 271
Query: 304 DPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVV 350
+F M R PE E I C + RP +V
Sbjct: 272 ---KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM---QGNKEFLVEVLMLSLLHHPNLVNLI 140
LG+GGF + ++ + +V A K + ++ + ++ +E+ + L H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G+ D D +V E S LL++++ +K L G +YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RDLK N+ L +L+ K+ DFGLA K+ GE+ + GT Y APE
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKKG 193
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTT 286
+ + DV+S G I+ L+ G+ +T+
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
++NL+G C ++ E+ S G++ ++L D+N ++ + + +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N K++DFGLA+ + T+
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+ + LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 166
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+ + LD + E+ +L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 135 NLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA--------SG 186
N+V L+ ++ LV+EF+ + KK +D + I
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-----------QDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 165
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 85 LGEGGFGRVYKGT----LQSNGQV-VAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPNLV 137
LG G FG+V + T ++S+ + VAVK L + +E L+ E+ +LS L +H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVNETKKPL--------DWTTRMKI 183
NL+G C G L++ E+ G + + L ++T + D +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
+ A+G+ +L K I+RDL + NILL K+ DFGLA+ V
Sbjct: 151 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFR 303
+ APE + T +SDV+S+G+ L EL + PVD
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------------ 255
Query: 304 DPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVV 350
+F M R PE E I C + RP +V
Sbjct: 256 ---KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPN 135
LGEG FG+V + VAVK L + + + + + E+ M+ ++ H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL---------LDVNETKKPLDWTTRMKIASG 186
++NL+G C ++ E+ S G++ ++L N + P + + + S
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 187 A---AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A A+G+EYL A+ I+RDL + N+L+ + K++DFGLA+ + T+
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV+L E+ T
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 85 LGEGGFGRVYKGT----LQSNGQV-VAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPNLV 137
LG G FG+V + T ++S+ + VAVK L + +E L+ E+ +LS L +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVNETKKPL--------DWTTRMKI 183
NL+G C G L++ E+ G + + L ++T + D +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
+ A+G+ +L K I+RDL + NILL K+ DFGLA+ V
Sbjct: 174 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFR 303
+ APE + T +SDV+S+G+ L EL + PVD
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------------ 278
Query: 304 DPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVV 350
+F M R PE E I C + RP +V
Sbjct: 279 ---KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPN 135
LGEG FG+V + VAVK L + + + + + E+ M+ ++ H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL---------LDVNETKKPLDWTTRMKIASG 186
++NL+G C ++ E+ S G++ ++L N + P + + + S
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 187 A---AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A A+G+EYL A+ I+RDL + N+L+ + K++DFGLA+ + T+
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV+L E+ T
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 85 LGEGGFGRVYKGT----LQSNGQV-VAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPNLV 137
LG G FG+V + T ++S+ + VAVK L + +E L+ E+ +LS L +H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHL------LDVNETKKPL--------DWTTRMKI 183
NL+G C G L++ E+ G + + L ++T + D +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
+ A+G+ +L K I+RDL + NILL K+ DFGLA+ V
Sbjct: 169 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFR 303
+ APE + T +SDV+S+G+ L EL + PVD
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------------ 273
Query: 304 DPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVV 350
+F M R PE E I C + RP +V
Sbjct: 274 ---KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF-LVEV---LMLSLLHHPNLVNL 139
++G G + +V L+ ++ A+K + + + +++ V+ + +HP LV L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 140 IGYCADGDQRLL-VYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
C + RL V E+++GG + H+ + ++ L ++ + L YLH++
Sbjct: 87 HS-CFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
+IYRDLK N+LL + KL+D+G+ K G + + TS GT Y APE R
Sbjct: 142 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR--PGDTTSXFCGTPNYIAPEILRGE 196
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTT 286
+ D ++ GV++ E++ GR D
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNL 136
+F + LG G G V+K + + +G V+A K + + + + E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 137 VNLIG-YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
V G + +DG+ + + E M GGS+D L + + K++ +GL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLR 121
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN-VTSRVMGTYGYCAPEY 254
+K +++RD+K SNIL+ + + KL DFG++ G+ ++ + + +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 174
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVI 283
+ +V+SD++S G+ L+E+ GR I
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
++NL+G C ++ E+ S G++ ++L D+N ++ + + +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N K++DFGLA+ + T+
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNL 136
+F + LG G G V+K + + +G V+A K + + + + E+ +L + P +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 137 VNLIG-YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
V G + +DG+ + + E M GGS+D L + + K++ +GL YL
Sbjct: 94 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLR 148
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN-VTSRVMGTYGYCAPEY 254
+K +++RD+K SNIL+ + + KL DFG++ G+ ++ + + +GT Y +PE
Sbjct: 149 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 201
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVI 283
+ +V+SD++S G+ L+E+ GR I
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNL 136
+F + LG G G V+K + + +G V+A K + + + + E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 137 VNLIG-YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
V G + +DG+ + + E M GGS+D L + + K++ +GL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLR 121
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN-VTSRVMGTYGYCAPEY 254
+K +++RD+K SNIL+ + + KL DFG++ G+ ++ + + +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 174
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVI 283
+ +V+SD++S G+ L+E+ GR I
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPN 135
LGEG FG+V + VAVK L + + + + + E+ M+ ++ H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL---------LDVNETKKPLDWTTRMKIASG 186
++NL+G C ++ E+ S G++ ++L N + P + + + S
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 187 A---AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A A+G+EYL A+ I+RDL + N+L+ + K++DFGLA+ + T+
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV+L E+ T
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
++NL+G C ++ E+ S G++ ++L D+N ++ + + +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N K++DFGLA+ + T+
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F V + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 144
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPN 135
LGEG FG+V + VAVK L + + + + + E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL---------LDVNETKKPLDWTTRMKIASG 186
++NL+G C ++ E+ S G++ ++L N + P + + + S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 187 A---AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A A+G+EYL A+ I+RDL + N+L+ + K++DFGLA+ + T+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV+L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQS-NGQVV--AVKQLDRNGM---QGNKEFLVEVLMLSL 130
K+ R LG+G FG V +G + +G+ V AVK L + + + +F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 131 LHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQG 190
L H NL+ L G ++ V E GS+ D L + + T + A A+G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEG 123
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT-YGY 249
+ YL K I+RDL + N+LL K+ DFGL + PQ + V + +
Sbjct: 124 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
CAPE ++ + SD + FGV L E+ T
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNG-MQGNKEFLVEVLMLSLLHH-PNLVNLIGY 142
+G G G+V+K + G V+AVKQ+ R+G + NK L+++ ++ H P +V G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ E M G+ + L + P +M +A + L YL +K V
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVA--IVKALYYLKEKHG--V 146
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN--VTSRVMGTYGYCAPEYARSGEL 260
I+RD+K SNILL KL DFG++ G ++ R G Y APE +
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGIS-----GRLVDDKAKDRSAGCAAYMAPERIDPPDP 201
Query: 261 T-----VKSDVYSFGVILLELITGR 280
T +++DV+S G+ L+EL TG+
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPN 135
LGEG FG+V + VAVK L + + + + + E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL---------LDVNETKKPLDWTTRMKIASG 186
++NL+G C ++ E+ S G++ ++L N + P + + + S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 187 A---AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A A+G+EYL A+ I+RDL + N+L+ + K++DFGLA+ + T+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV+L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF-LVEV---LMLSLLHHPNLVNL 139
++G G + +V L+ ++ A+K + + + +++ V+ + +HP LV L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 140 IGYCADGDQRLL-VYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
C + RL V E+++GG + H+ + ++ L ++ + L YLH++
Sbjct: 72 HS-CFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
+IYRDLK N+LL + KL+D+G+ K G + + TS GT Y APE R
Sbjct: 127 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR--PGDTTSXFCGTPNYIAPEILRGE 181
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTT 286
+ D ++ GV++ E++ GR D
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFDIV 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQS-NGQVV--AVKQLDRNGM---QGNKEFLVEVLMLSL 130
K+ R LG+G FG V +G + +G+ V AVK L + + + +F+ EV +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 131 LHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQG 190
L H NL+ L G ++ V E GS+ D L + + T + A A+G
Sbjct: 72 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEG 127
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT-YGY 249
+ YL K I+RDL + N+LL K+ DFGL + PQ + V + +
Sbjct: 128 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
CAPE ++ + SD + FGV L E+ T
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNL 136
+F + LG G G V+K + + +G V+A K + + + + E+ +L + P +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 137 VNLIG-YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
V G + +DG+ + + E M GGS+D L + + K++ +GL YL
Sbjct: 70 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLR 124
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN-VTSRVMGTYGYCAPEY 254
+K +++RD+K SNIL+ + + KL DFG++ G+ ++ + + +GT Y +PE
Sbjct: 125 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDEMANEFVGTRSYMSPER 177
Query: 255 ARSGELTVKSDVYSFGVILLELITGR 280
+ +V+SD++S G+ L+E+ GR
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
++NL+G C ++ E+ S G++ ++L D+N ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N +++DFGLA+ + T+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 32/221 (14%)
Query: 82 ECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
EC+ G+G +G V++G +G+ VAVK R+ +E E+ LL H N++ I
Sbjct: 14 ECV-GKGRYGEVWRGLW--HGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFI 68
Query: 141 GYCA----DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH- 195
Q L+ + GS+ D L ++ L+ +++A AA GL +LH
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFL-----QRQTLEPHLALRLAVSAACGLAHLHV 123
Query: 196 ----DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGE---KMNVTSRVMGTYG 248
+ P + +RD KS N+L+ +NL ++D GLA + QG + RV GT
Sbjct: 124 EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKR 182
Query: 249 YCAPEY------ARSGELTVKSDVYSFGVILLELITGRRVI 283
Y APE E +D+++FG++L E+ RR I
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQS-NGQVV--AVKQLDRNGM---QGNKEFLVEVLMLSL 130
K+ R LG+G FG V +G + +G+ V AVK L + + + +F+ EV +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 131 LHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQG 190
L H NL+ L G ++ V E GS+ D L + + T + A A+G
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEG 133
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT-YGY 249
+ YL K I+RDL + N+LL K+ DFGL + PQ + V + +
Sbjct: 134 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
CAPE ++ + SD + FGV L E+ T
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 110/252 (43%), Gaps = 29/252 (11%)
Query: 74 AATKNFRQEC----LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEV---- 125
AA K F Q+ ++G G V + ++ G AVK ++ + + E L EV
Sbjct: 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREAT 146
Query: 126 -----LMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTR 180
++ + HP+++ LI LV++ M G + D+L + K L
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKET 202
Query: 181 MKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVT 240
I + + +LH AN +++RDLK NILL N+ +LSDFG + GEK+
Sbjct: 203 RSIMRSLLEAVSFLH--ANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR-- 257
Query: 241 SRVMGTYGYCAPEYARSGELTV------KSDVYSFGVILLELITGRRVIDTTRPVDEQNL 294
+ GT GY APE + + D+++ GVIL L+ G R + +
Sbjct: 258 -ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM 316
Query: 295 IAWAQPIFRDPK 306
I Q F P+
Sbjct: 317 IMEGQYQFSSPE 328
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF-LVEV---LMLSLLHHPNLVNL 139
++G G + +V L+ ++ A+K + + + +++ V+ + +HP LV L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 140 IGYCADGDQRLL-VYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
C + RL V E+++GG + H+ + ++ L ++ + L YLH++
Sbjct: 76 HS-CFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
+IYRDLK N+LL + KL+D+G+ K G + + TS GT Y APE R
Sbjct: 131 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR--PGDTTSXFCGTPNYIAPEILRGE 185
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTT 286
+ D ++ GV++ E++ GR D
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIV 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQS-NGQVV--AVKQLDRNGM---QGNKEFLVEVLMLSL 130
K+ R LG+G FG V +G + +G+ V AVK L + + + +F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 131 LHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQG 190
L H NL+ L G ++ V E GS+ D L + + T + A A+G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEG 123
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT-YGY 249
+ YL K I+RDL + N+LL K+ DFGL + PQ + V + +
Sbjct: 124 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
CAPE ++ + SD + FGV L E+ T
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQS-NGQVV--AVKQLDRNGM---QGNKEFLVEVLMLSL 130
K+ R LG+G FG V +G + +G+ V AVK L + + + +F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 131 LHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQG 190
L H NL+ L G ++ V E GS+ D L + + T + A A+G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEG 123
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT-YGY 249
+ YL K I+RDL + N+LL K+ DFGL + PQ + V + +
Sbjct: 124 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
CAPE ++ + SD + FGV L E+ T
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + KE L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E+ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+++ K++DFGLAK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNL 136
+F + LG G G V+K + + +G V+A K + + + + E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 137 VNLIG-YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
V G + +DG+ + + E M GGS+D L + + K++ +GL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLR 121
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN-VTSRVMGTYGYCAPEY 254
+K +++RD+K SNIL+ + + KL DFG++ G+ ++ + + +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 174
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVI 283
+ +V+SD++S G+ L+E+ GR I
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNL 136
+F + LG G G V+K + + +G V+A K + + + + E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 137 VNLIG-YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
V G + +DG+ + + E M GGS+D L + + K++ +GL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLR 121
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN-VTSRVMGTYGYCAPEY 254
+K +++RD+K SNIL+ + + KL DFG++ G+ ++ + + +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 174
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVI 283
+ +V+SD++S G+ L+E+ GR I
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQS-NGQVV--AVKQLDRNGM---QGNKEFLVEVLMLSL 130
K+ R LG+G FG V +G + +G+ V AVK L + + + +F+ EV +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 131 LHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQG 190
L H NL+ L G ++ V E GS+ D L + + T + A A+G
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEG 133
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT-YGY 249
+ YL K I+RDL + N+LL K+ DFGL + PQ + V + +
Sbjct: 134 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
CAPE ++ + SD + FGV L E+ T
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPN 135
LGEG FG+V + VAVK L + + + + + E+ M+ ++ H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL---------LDVNETKKPLDWTTRMKIASG 186
++NL+G C ++ E+ S G++ ++L N + P + + + S
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 187 A---AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A A+G+EYL A+ I+RDL + N+L+ + K++DFGLA+ + T+
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV+L E+ T
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + +G G FGRV G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E+M GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ K++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + +G G FGRV G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E+M GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ K++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF-LVEV---LMLSLLHHPNLVNL 139
++G G + +V L+ ++ A++ + + + +++ V+ + +HP LV L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 140 IGYCADGDQRLL-VYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
C + RL V E+++GG D + + +K + R A + L YLH++
Sbjct: 119 HS-CFQTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLHERG 173
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
+IYRDLK N+LL + KL+D+G+ K G + + TS GT Y APE R
Sbjct: 174 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR--PGDTTSTFCGTPNYIAPEILRGE 228
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTT 286
+ D ++ GV++ E++ GR D
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFDIV 256
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 13/210 (6%)
Query: 74 AATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE---FLVEV-LMLS 129
A +F ++G+G FG+V ++ AVK L + + KE + E ++L
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK 94
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
+ HP LV L D+ V ++++GG + HL + L+ R A+ A
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL---QRERCFLEPRARF-YAAEIAS 150
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
L YLH ++YRDLK NILL + L+DFGL K E + TS GT Y
Sbjct: 151 ALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEY 205
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITG 279
APE D + G +L E++ G
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQS-NGQVV--AVKQLDRNGM---QGNKEFLVEVLMLSL 130
K+ R LG+G FG V +G + +G+ V AVK L + + + +F+ EV +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 131 LHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQG 190
L H NL+ L G ++ V E GS+ D L + + T + A A+G
Sbjct: 72 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEG 127
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT-YGY 249
+ YL K I+RDL + N+LL K+ DFGL + PQ + V + +
Sbjct: 128 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELIT 278
CAPE ++ + SD + FGV L E+ T
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 182
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIILSKGYN 237
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 291
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV--EVLMLSLLHH 133
++F+ +LGEG F + + A+K L+ R+ ++ NK V E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
P V L D ++ + G + ++ + D T + LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
LH K +I+RDLK NILL ++ +++DFG AK+ K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
SD+++ G I+ +L+ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 35/276 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V G + GQ ++ + G EF+ E ++ L H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ E+M+ G + ++L E + +++ + +EYL K ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 143
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL + N L+ K+SDFGL++ E+ TS V + + PE + +
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE---TSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 263 KSDVYSFGVILLELIT-GRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFP 321
KSD+++FGV++ E+ + G+ + + IA ++R P
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-----------------P 243
Query: 322 EKGLNEAVAIAAMCLQEEAGARP----LMSDVVTAL 353
+ I C E+A RP L+S+++ +
Sbjct: 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHP 134
+NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 135 NLVNLIGYCADGDQRLLVYE--------FMSGGSVDDHLLDVNETKKPLDWTTRMKIASG 186
N+V L+ ++ LV+E FM ++ T PL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASAL---------TGIPLPLIKSYLFQ-- 110
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 247 YGYCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPN 135
LGEG FG+V + VAVK L + + + + + E+ M+ ++ H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL---------LDVNETKKPLDWTTRMKIASG 186
++NL+G C ++ E+ S G++ ++L N + P + + + S
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 187 A---AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A A+G+EYL K I+RDL + N+L+ + K++DFGLA+ + T+
Sbjct: 197 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV+L E+ T
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
+++L+G C ++ E+ S G++ ++L D+N ++ + + +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N K++DFGLA+ + T+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLI 140
LLG+G FG+V ++ G+ A+K L + + E + E +L HP L L
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 74
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKAN 199
D+ V E+ +GG + HL +++ + R + + LEYLH +
Sbjct: 75 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 127
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V+YRD+K N++L + K++DFGL K G G M GT Y APE
Sbjct: 128 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCGTPEYLAPEVLEDN 183
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ D + GV++ E++ GR P Q+ + I + RFP P
Sbjct: 184 DYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHERLFELILMEEIRFPRTLSP 233
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQV-VAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LG G FG V G + GQ VA+K + + G EF+ E ++ L H LV L G C
Sbjct: 12 LGTGQFGVVKYG--KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
++ E+M+ G + ++L E + +++ + +EYL K +
Sbjct: 69 TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FL 122
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELT 261
+RDL + N L+ K+SDFGL++ E TS V + + PE + +
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 262 VKSDVYSFGVILLELIT 278
KSD+++FGV++ E+ +
Sbjct: 180 SKSDIWAFGVLMWEIYS 196
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 85 LGEGGFGRVYKGT-LQSNGQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNLIGY 142
+G G F VYKG ++ +V + DR + ++ F E L L HPN+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 143 ---CADGDQRL-LVYEFMSGGSVDDHL--LDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
G + + LV E + G++ +L V + K W ++ +GL++LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHT 147
Query: 197 KANPPVIYRDLKSSNILL-GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE-Y 254
+ PP+I+RDLK NI + G K+ D GLA L ++ + V+GT + APE Y
Sbjct: 148 R-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXY 202
Query: 255 ARSGELTVKSDVYSFGVILLELIT 278
+ +V DVY+FG LE T
Sbjct: 203 EEKYDESV--DVYAFGXCXLEXAT 224
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLI 140
LLG+G FG+V ++ G+ A+K L + + E + E +L HP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKAN 199
D+ V E+ +GG + HL +++ + R + + LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 124
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V+YRD+K N++L + K++DFGL K G G M GT Y APE
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCGTPEYLAPEVLEDN 180
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ D + GV++ E++ GR P Q+ + I + RFP P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHERLFELILMEEIRFPRTLSP 230
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQV-VAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LG G FG V G + GQ VA+K + + G EF+ E ++ L H LV L G C
Sbjct: 16 LGTGQFGVVKYGKWR--GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
++ E+M+ G + ++L E + +++ + +EYL K +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FL 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELT 261
+RDL + N L+ K+SDFGL++ E TS V + + PE + +
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 262 VKSDVYSFGVILLELIT 278
KSD+++FGV++ E+ +
Sbjct: 184 SKSDIWAFGVLMWEIYS 200
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
++ L+G C ++ E+ S G++ ++L D+N ++ + + +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N K++DFGLA+ + T+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 19/224 (8%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLH 132
+ +NF++ +GEG +G VYK + G+VVA+K+ LD + E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 133 HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHL---LDVNE-TKKPLDWTTRMKIASGAA 188
HPN+V L+ ++ LV+E VD L +D + T PL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFE-----HVDQDLKKFMDASALTGIPLPLIKSYLFQ--LL 116
Query: 189 QGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYG 248
QGL + H V++RDLK N+L+ KL+DFGLA+ G + + T
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 171
Query: 249 YCAPEYARSGE-LTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
Y APE + + D++S G I E++T R + +D+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 15/211 (7%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNL 136
+F + LG G G V+K + + +G V+A K + + + + E+ +L + P +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 137 VNLIG-YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
V G + +DG+ + + E M GGS+D L + + K++ +GL YL
Sbjct: 86 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLR 140
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN-VTSRVMGTYGYCAPEY 254
+K +++RD+K SNIL+ + + KL DFG++ G+ ++ + + +GT Y +PE
Sbjct: 141 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 193
Query: 255 ARSGELTVKSDVYSFGVILLELITGRRVIDT 285
+ +V+SD++S G+ L+E+ GR I +
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIGS 224
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPN 135
LGEG FG+V + VAVK L + + + + + E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL---------LDVNETKKPLDWTTRMKIASG 186
++NL+G C ++ E+ S G++ ++L N + P + + + S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 187 A---AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A A+G+EYL A+ I+RDL + N+L+ + K++DFGLA+ + T+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV+L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 116/276 (42%), Gaps = 35/276 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V G + GQ ++ + G EF+ E ++ L H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ E+M+ G + ++L E + +++ + +EYL K ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 143
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELTV 262
RDL + N L+ K+SDFGL++ E TS V + + PE + +
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 263 KSDVYSFGVILLELIT-GRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFP 321
KSD+++FGV++ E+ + G+ + + IA ++R P
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-----------------P 243
Query: 322 EKGLNEAVAIAAMCLQEEAGARP----LMSDVVTAL 353
+ I C E+A RP L+S+++ +
Sbjct: 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLI 140
LLG+G FG+V ++ G+ A+K L + + E + E +L HP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKAN 199
D+ V E+ +GG + HL +++ + R + + LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 124
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V+YRD+K N++L + K++DFGL K G G M GT Y APE
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCGTPEYLAPEVLEDN 180
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ D + GV++ E++ GR P Q+ + I + RFP P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHERLFELILMEEIRFPRTLSP 230
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 162
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 271
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLI 140
LLG+G FG+V ++ G+ A+K L + + E + E +L HP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKAN 199
D+ V E+ +GG + HL +++ + R + + LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 124
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V+YRD+K N++L + K++DFGL K G G M GT Y APE
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX---FCGTPEYLAPEVLEDN 180
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ D + GV++ E++ GR P Q+ + I + RFP P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHERLFELILMEEIRFPRTLSP 230
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
++NL+G C ++ + S G++ ++L D+N ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N K++DFGLA+ + T+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLLHHPN 135
K F + LG G F V ++ G++ AVK + + ++G + + E+ +L + H N
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHEN 81
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVN-ETKKPLDWTTRMKIASGAAQGLEYL 194
+V L + LV + +SGG + D +++ T+K R + + YL
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVL-----DAVYYL 136
Query: 195 HDKANPPVIYRDLKSSNILLGANLDPK---LSDFGLAKLGPQGEKMNVTSRVMGTYGYCA 251
H +++RDLK N+L + + +SDFGL+K+ +G +V S GT GY A
Sbjct: 137 HRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKG---DVMSTACGTPGYVA 190
Query: 252 PEYARSGELTVKSDVYSFGVILLELITG 279
PE + D +S GVI L+ G
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
+G+G FG+V ++ A+K +++ E E+ ++ L HP LVNL
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D + +V + + GG + HL K+ T ++ I L+YL N
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE---TVKLFICE-LVMALDYLQ---NQR 135
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY--ARSGE 259
+I+RD+K NILL + ++DF +A + P+ ++ + GT Y APE +R G
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA---GTKPYMAPEMFSSRKGA 192
Query: 260 -LTVKSDVYSFGVILLELITGRR 281
+ D +S GV EL+ GRR
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 37/277 (13%)
Query: 85 LGEGGFGRVYKGTLQSNGQV-VAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LG G FG V G + GQ VA+K + + G EF+ E ++ L H LV L G C
Sbjct: 17 LGTGQFGVVKYG--KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
++ E+M+ G + ++L E + +++ + +EYL K +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FL 127
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELT 261
+RDL + N L+ K+SDFGL++ E TS V + + PE + +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 262 VKSDVYSFGVILLELIT-GRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQF 320
KSD+++FGV++ E+ + G+ + + IA ++R
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------------- 227
Query: 321 PEKGLNEAVAIAAMCLQEEAGARP----LMSDVVTAL 353
P + I C E+A RP L+S+++ +
Sbjct: 228 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 264
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLD 182
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 237
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 291
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLI 140
LLG+G FG+V ++ G+ A+K L + + E + E +L HP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKAN 199
D+ V E+ +GG + HL +++ + R + + LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 124
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V+YRD+K N++L + K++DFGL K G G M GT Y APE
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX---FCGTPEYLAPEVLEDN 180
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ D + GV++ E++ GR P Q+ + I + RFP P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHERLFELILMEEIRFPRTLSP 230
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLD 156
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 211
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPV 289
D ++ GV++ E+ G +P+
Sbjct: 212 KAVDWWALGVLIYEMAAGYPPFFADQPI 239
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQV--VAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIG 141
LG G FG V +G + + VA+K L + + + +E + E ++ L +P +V LIG
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
C + +LV E GG + L+ E + P+ + ++ + G++YL +K
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKRE-EIPV--SNVAELLHQVSMGMKYLEEKN--- 130
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTY--GYCAPEYARSG 258
++RDL + N+LL K+SDFGL+K LG + T+R G + + APE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ + +SDV+S+GV + E ++
Sbjct: 189 KFSSRSDVWSYGVTMWEALS 208
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL-------DWTTR---MKIASG 186
NL+G C G +++ EF G++ +L P D+ T + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 247 YGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 85 LGEGGFGRVYKGTLQSNGQV-VAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LG G FG V G + GQ VAVK + + G EF E + L HP LV G C
Sbjct: 16 LGSGQFGVVKLG--KWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+ +V E++S G + ++L + +P + +++ +G+ +L + I
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFL---ESHQFI 126
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTVK 263
+RDL + N L+ +L K+SDFG+ + + ++ + APE + + K
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPV-KWSAPEVFHYFKYSSK 185
Query: 264 SDVYSFGVILLELIT 278
SDV++FG+++ E+ +
Sbjct: 186 SDVWAFGILMWEVFS 200
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
LG+G F +++KG + G V +K LD+ ++ F M+S L H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
G C GD+ +LV EF+ GS+D +L + K ++ ++++A A + +L +
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYL---KKNKNCINILWKLEVAKQLAAAMHFLEEN 132
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSR--VMGTYGYCAPEYA 255
+I+ ++ + NILL D K + KL G + V + + + PE
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 256 RSGE-LTVKSDVYSFGVILLELITG 279
+ + L + +D +SFG L E+ +G
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL-----DWTTRMKI---ASGAA 188
NL+G C G +++ EF G++ +L P D+ T + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 189 QGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYG 248
+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 249 YCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL--------DWTTRMKI---AS 185
NL+G C G +++ EF G++ +L P D+ T + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 186 GAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMG 245
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 246 TYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 85 LGEGGFGRVY-----KGTLQSNGQVVAVKQLDR--------NGMQGNKEFLVEVLMLSLL 131
LG G +G V G + +V+ Q D+ N + ++E E+ +L L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 132 HHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGL 191
HPN++ L D LV EF GG + + +++ + D I G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGI 159
Query: 192 EYLHDKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYG 248
YLH K N +++RD+K NILL + L+ K+ DFGL+ + K+ +GT
Sbjct: 160 CYLH-KHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL---RDRLGTAY 213
Query: 249 YCAPEYARSGELTVKSDVYSFGVILLELITG 279
Y APE + + K DV+S GVI+ L+ G
Sbjct: 214 YIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 102/248 (41%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV + G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLI 140
LLG+G FG+V ++ G+ A+K L + + E + E +L HP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKAN 199
D+ V E+ +GG + HL +++ + R + + LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 124
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V+YRD+K N++L + K++DFGL K G G M GT Y APE
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX---FCGTPEYLAPEVLEDN 180
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ D + GV++ E++ GR P Q+ + I + RFP P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHERLFELILMEEIRFPRTLSP 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 100/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + KE L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E+ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+++ +++DFGLAK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 37/277 (13%)
Query: 85 LGEGGFGRVYKGTLQSNGQV-VAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LG G FG V G + GQ VA+K + + G EF+ E ++ L H LV L G C
Sbjct: 23 LGTGQFGVVKYG--KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
++ E+M+ G + ++L E + +++ + +EYL K +
Sbjct: 80 TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FL 133
Query: 204 YRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSGELT 261
+RDL + N L+ K+SDFGL++ E TS V + + PE + +
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 262 VKSDVYSFGVILLELIT-GRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQF 320
KSD+++FGV++ E+ + G+ + + IA ++R
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------------- 233
Query: 321 PEKGLNEAVAIAAMCLQEEAGARP----LMSDVVTAL 353
P + I C E+A RP L+S+++ +
Sbjct: 234 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 270
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 148
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 203
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 204 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 257
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 102/248 (41%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV + G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD--RNGMQGNKEFLVEVLMLSLLHH-PNLVNLIG 141
LG G F V + +S GQ A K L R G E L E+ +L L P ++NL
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
+ + +L+ E+ +GG + L + E + + +++ +G+ YLH
Sbjct: 97 VYENTSEIILILEYAAGGEIFS--LCLPELAEMVSENDVIRLIKQILEGVYYLHQNN--- 151
Query: 202 VIYRDLKSSNILLGANL---DPKLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAPEYARS 257
+++ DLK NILL + D K+ DFG++ K+G E +MGT Y APE
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE----LREIMGTPEYLAPEILNY 207
Query: 258 GELTVKSDVYSFGVILLELIT 278
+T +D+++ G+I L+T
Sbjct: 208 DPITTATDMWNIGIIAYMLLT 228
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 102/248 (41%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E+++GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLI 140
LLG+G FG+V ++ G+ A+K L + + E + E +L HP L L
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 76
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI-ASGAAQGLEYLHDKAN 199
D+ V E+ +GG + HL +++ + R + + LEYLH +
Sbjct: 77 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 129
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V+YRD+K N++L + K++DFGL K G G M GT Y APE
Sbjct: 130 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX---FCGTPEYLAPEVLEDN 185
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADP 314
+ D + GV++ E++ GR P Q+ + I + RFP P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHERLFELILMEEIRFPRTLSP 235
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL-----DWTTR---MKIASGAA 188
NL+G C G +++ EF G++ +L P D+ T + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 189 QGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYG 248
+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 249 YCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 102/248 (41%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV + G A+K LD+ + K+ L E +L
Sbjct: 58 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 117
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 173
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 174 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 225
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 283
Query: 310 DMADPLLR 317
LLR
Sbjct: 284 SDLKDLLR 291
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 74 AATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHH 133
A + F E LG G VY+ + + A+K L + K E+ +L L H
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSH 107
Query: 134 PNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE- 192
PN++ L + LV E ++GG + D +++ + + A Q LE
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG-------YYSERDAADAVKQILEA 160
Query: 193 --YLHDKANPPVIYRDLKSSNILLGA---NLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY 247
YLH+ +++RDLK N+L + K++DFGL+K+ E + V GT
Sbjct: 161 VAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTP 214
Query: 248 GYCAPEYARSGELTVKSDVYSFGVILLELITG 279
GYCAPE R + D++S G+I L+ G
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 102/248 (41%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV + G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 102/248 (41%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV + G A+K LD+ + K+ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 263
Query: 310 DMADPLLR 317
LLR
Sbjct: 264 SDLKDLLR 271
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQL--DRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+GEG +G V+K + GQ+VA+K+ + K L E+ ML L HPNLVNL+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ LV+E+ + H LD + P I Q + + H K N
Sbjct: 71 FRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVK--SITWQTLQAVNFCH-KHN--C 123
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKL--GPQGEKMNVTSRVMGTYGYCAPE-YARSGE 259
I+RD+K NIL+ + KL DFG A+L GP + + T Y +PE +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPS----DYYDDEVATRWYRSPELLVGDTQ 179
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
DV++ G + EL++G + VD+ LI
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLI 215
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL---------DWTTRMKI---A 184
NL+G C G +++ EF G++ +L P D+ T + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 245 GTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 102/248 (41%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV + G A+K LD+ + K+ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 263
Query: 310 DMADPLLR 317
LLR
Sbjct: 264 SDLKDLLR 271
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 85 LGEGGFGRVYKGTL-------QSNGQVVAVKQLDRNGMQGNKEFLV-EVLMLSLL-HHPN 135
LGEG FG+V VAVK L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHL-----------LDVNET-KKPLDWTTRMKI 183
++NL+G C ++ + S G++ ++L D+N ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRV 243
A+G+EYL A+ I+RDL + N+L+ N K++DFGLA+ + T+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 244 MGTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 102/248 (41%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV + G A+K LD+ + K+ L E +L
Sbjct: 30 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 89
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 145
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 146 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 197
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 255
Query: 310 DMADPLLR 317
LLR
Sbjct: 256 SDLKDLLR 263
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 15/220 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV + G A+K LD+ + K+ L E +L
Sbjct: 30 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 89
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIVL 145
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 146 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 197
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPV 289
APE S D ++ GV++ E+ G +P+
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 102/248 (41%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV + G A+K LD+ + K+ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 263
Query: 310 DMADPLLR 317
LLR
Sbjct: 264 SDLKDLLR 271
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL---------DWTTRMKI---A 184
NL+G C G +++ EF G++ +L P D+ T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 245 GTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV + G A+K LD+ + K+ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E+ GG + HL + +P R A+
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+++ K++DFG AK T + GT Y
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 263
Query: 310 DMADPLLR 317
LLR
Sbjct: 264 SDLKDLLR 271
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVK-----QLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL 139
LG+G FG VY + + +VA+K Q+++ G++ + E+ + + LHHPN++ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE--HQLRREIEIQAHLHHPNILRL 88
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
Y D + L+ E+ G + L + D I A L Y H K
Sbjct: 89 YNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMYCHGKK- 143
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
VI+RD+K N+LLG + K++DFG + P + + GT Y PE
Sbjct: 144 --VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC----GTLDYLPPEMIEGRM 197
Query: 260 LTVKSDVYSFGVILLELITG 279
K D++ GV+ EL+ G
Sbjct: 198 HNEKVDLWCIGVLCYELLVG 217
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 123/270 (45%), Gaps = 35/270 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRN-GMQGNKEFLVEV-LMLSLLHHPNLVNLIGY 142
LG G +G V K +GQ++AVK++ Q K L+++ + + + P V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ E M S+D V + + + KIA + LE+LH K + V
Sbjct: 119 LFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 175
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM--GTYGYCAPEYARSGEL 260
I+RD+K SN+L+ A K+ DFG++ G ++ ++ + G Y APE + EL
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGIS-----GYLVDSVAKTIDAGCKPYMAPERI-NPEL 229
Query: 261 -----TVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPL 315
+VKSD++S G+ ++EL R D+ W P F+ K+ + P
Sbjct: 230 NQKGYSVKSDIWSLGITMIELAILRFPYDS-----------WGTP-FQQLKQVVEEPSP- 276
Query: 316 LRKQFP-EKGLNEAVAIAAMCLQEEAGARP 344
Q P +K E V + CL++ + RP
Sbjct: 277 ---QLPADKFSAEFVDFTSQCLKKNSKERP 303
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + +G G FGRV G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ K++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQV--VAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIG 141
LG G FG V +G + + VA+K L + + + +E + E ++ L +P +V LIG
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
C + +LV E GG + L+ E + + ++ + G++YL +K
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREE---IPVSNVAELLHQVSMGMKYLEEKN--- 456
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTY--GYCAPEYARSG 258
++R+L + N+LL K+SDFGL+K LG + T+R G + + APE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ + +SDV+S+GV + E ++
Sbjct: 515 KFSSRSDVWSYGVTMWEALS 534
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQV-------VAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
LG+G F +++KG + G V +K LD+ ++ F M+S L H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
G C GD+ +LV EF+ GS+D +L + K ++ ++++A A + +L +
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL---KKNKNCINILWKLEVAKQLAWAMHFLEEN 132
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSR--VMGTYGYCAPEYA 255
+I+ ++ + NILL D K + KL G + V + + + PE
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 256 RSGE-LTVKSDVYSFGVILLELITG 279
+ + L + +D +SFG L E+ +G
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+++ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIISKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL---------DWTTRMKI---A 184
NL+G C G +++ EF G++ +L P D+ T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 245 GTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 263
Query: 310 DMADPLLR 317
LLR
Sbjct: 264 SDLKDLLR 271
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ ++ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEY 205
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 263
Query: 310 DMADPLLR 317
LLR
Sbjct: 264 SDLKDLLR 271
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 34/221 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD---RNGMQGNKEFLVEVLMLSLLHHPNLVNLIG 141
LG+G +G V+K + G+VVAVK++ +N + F +++ L H N+VNL+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 142 YC-ADGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
AD D+ + LV+++M D H + +P+ + + + ++YLH
Sbjct: 77 VLRADNDRDVYLVFDYME---TDLHAVIRANILEPVH---KQYVVYQLIKVIKYLHSGG- 129
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAK---------------LGPQGEKMN----VT 240
+++RD+K SNILL A K++DFGL++ + E + +
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 241 SRVMGTYGYCAPEYAR-SGELTVKSDVYSFGVILLELITGR 280
+ + T Y APE S + T D++S G IL E++ G+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL---------DWTTRMKI---A 184
NL+G C G +++ EF G++ +L P D+ T + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 245 GTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 100/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E+ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+++ K++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL---------DWTTRMKIASGA 187
NL+G C G +++ EF G++ +L P D+ T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 188 ---AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 245 GTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 28/275 (10%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQV--VAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNL 139
+LGEG FG VY+G ++ G+ VAVK ++ NKE F+ E +++ L HP++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
IG + + ++ E G + H L+ N K L T + + + + YL + N
Sbjct: 75 IG-IIEEEPTWIIMELYPYGEL-GHYLERN--KNSLKVLTLVLYSLQICKAMAYL-ESIN 129
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++RD+ NIL+ + KL DFGL++ + E S + +PE
Sbjct: 130 --CVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQ 319
T SDV+ F V + E+++ + ++ +++I + R PK PD+ P+L
Sbjct: 187 FTTASDVWMFAVCMWEILSFGK--QPFFWLENKDVIGVLEKGDRLPK--PDLCPPVL--- 239
Query: 320 FPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
+ C + RP +++V +LS
Sbjct: 240 ---------YTLMTRCWDYDPSDRPRFTELVCSLS 265
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIVL 153
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 263
Query: 310 DMADPLLR 317
LLR
Sbjct: 264 SDLKDLLR 271
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL---------DWTTRMKI---A 184
NL+G C G +++ EF G++ +L P D+ T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 245 GTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 28/275 (10%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQV--VAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNL 139
+LGEG FG VY+G ++ G+ VAVK ++ NKE F+ E +++ L HP++V L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
IG + + ++ E G + H L+ N K L T + + + + YL + N
Sbjct: 91 IG-IIEEEPTWIIMELYPYGEL-GHYLERN--KNSLKVLTLVLYSLQICKAMAYL-ESIN 145
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++RD+ NIL+ + KL DFGL++ + E S + +PE
Sbjct: 146 --CVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSPESINFRR 202
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQ 319
T SDV+ F V + E+++ + ++ +++I + R PK PD+ P+L
Sbjct: 203 FTTASDVWMFAVCMWEILSFGK--QPFFWLENKDVIGVLEKGDRLPK--PDLCPPVL--- 255
Query: 320 FPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
+ C + RP +++V +LS
Sbjct: 256 ---------YTLMTRCWDYDPSDRPRFTELVCSLS 281
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL---------DWTTRMKI---A 184
NL+G C G +++ EF G++ +L P D+ T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 245 GTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL---------DWTTRMKIASGA 187
NL+G C G +++ EF G++ +L P D+ T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 188 ---AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 245 GTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 100/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E+ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+++ K++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
LG G FG V G + GQ ++ + G EF+ E ++ L H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
++ E+M+ G + ++L E + +++ + +EYL K ++
Sbjct: 75 KQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 128
Query: 205 RDLKSSNILLGANLDPKLSDFGLAKL-------GPQGEKMNVTSRVMGTYGYCAPEYARS 257
RDL + N L+ K+SDFGL++ +G K V + PE
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR--------WSPPEVLMY 180
Query: 258 GELTVKSDVYSFGVILLELIT 278
+ + KSD+++FGV++ E+ +
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYS 201
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 28/275 (10%)
Query: 84 LLGEGGFGRVYKGTLQSN-GQV--VAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNL 139
+LGEG FG VY+G ++ G+ VAVK ++ NKE F+ E +++ L HP++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
IG + + ++ E G + H L+ N K L T + + + + YL + N
Sbjct: 79 IG-IIEEEPTWIIMELYPYGEL-GHYLERN--KNSLKVLTLVLYSLQICKAMAYL-ESIN 133
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++RD+ NIL+ + KL DFGL++ + E S + +PE
Sbjct: 134 --CVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSPESINFRR 190
Query: 260 LTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLRKQ 319
T SDV+ F V + E+++ + ++ +++I + R PK PD+ P+L
Sbjct: 191 FTTASDVWMFAVCMWEILSFGK--QPFFWLENKDVIGVLEKGDRLPK--PDLCPPVL--- 243
Query: 320 FPEKGLNEAVAIAAMCLQEEAGARPLMSDVVTALS 354
+ C + RP +++V +LS
Sbjct: 244 ---------YTLMTRCWDYDPSDRPRFTELVCSLS 269
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 58 ETKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQG 117
+T NI +TF F E+ LG G F V+ + G++ A+K + ++
Sbjct: 3 QTTNIR-KTFIFMEV------------LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR 49
Query: 118 NKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLD---VNETKKP 174
+ E+ +L + H N+V L LV + +SGG + D +L+ E
Sbjct: 50 DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS 109
Query: 175 LDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILL---GANLDPKLSDFGLAKLG 231
L + ++YLH+ +++RDLK N+L N ++DFGL+K+
Sbjct: 110 L-------VIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159
Query: 232 PQGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
G + S GT GY APE + D +S GVI L+ G
Sbjct: 160 QNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV-EVLMLSLLH 132
AT + +G G +G VYK +G VA+K + NG +G V EV +L L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 133 ---HPNLVNLIGYCADG--DQRL---LVYEFMSGGSVDDHLLDVNETKKP--LDWTTRMK 182
HPN+V L+ CA D+ + LV+E VD L + P L T
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 183 IASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSR 242
+ +GL++LH +++RDLK NIL+ + KL+DFGLA++ +M +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI--YSYQMALAPV 171
Query: 243 VMGTYGYCAPEYARSGELTVKSDVYSFGVILLELI 277
V+ T Y APE D++S G I E+
Sbjct: 172 VV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 15/220 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 23 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 82
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E++ GG + HL + +P R A+
Sbjct: 83 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 138
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+L+ +++DFG AK T + GT Y
Sbjct: 139 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEY 190
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPV 289
APE S D ++ GV++ E+ G +P+
Sbjct: 191 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 230
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHLLDVNETKKPL---------DWTTRMKIASGA 187
NL+G C G +++ EF G++ +L P D+ T + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 188 ---AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM 244
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 245 GTYGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE---FLVEVLMLSLLHHPNLVNLIG 141
LG G +G V + G A+K + ++ + L EV +L L HPN++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
+ D LV E GG + D ++ + + +D MK G YLH K N
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMK---QVLSGTTYLH-KHN-- 124
Query: 202 VIYRDLKSSNILLGA---NLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
+++RDLK N+LL + + K+ DFGL+ G KM +GT Y APE R
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK---ERLGTAYYIAPEVLRK- 180
Query: 259 ELTVKSDVYSFGVILLELITG 279
+ K DV+S GVIL L+ G
Sbjct: 181 KYDEKCDVWSCGVILYILLCG 201
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE---FLVEVLMLSLLHHPNLVNLIG 141
LG G +G V + G A+K + ++ + L EV +L L HPN++ L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
+ D LV E GG + D ++ + + +D MK G YLH K N
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMK---QVLSGTTYLH-KHN-- 141
Query: 202 VIYRDLKSSNILLGA---NLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
+++RDLK N+LL + + K+ DFGL+ G KM +GT Y APE R
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK---ERLGTAYYIAPEVLRK- 197
Query: 259 ELTVKSDVYSFGVILLELITG 279
+ K DV+S GVIL L+ G
Sbjct: 198 KYDEKCDVWSCGVILYILLCG 218
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 34/234 (14%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDR-NGMQGNKEFLVEVLML 128
R + + +F+ + LLGEG +G V T + G++VA+K+++ + L E+ +L
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKIL 63
Query: 129 SLLHHPNLVNLIGY-----CADGDQRLLVYEFMSGG---SVDDHLLDVNETKKPLDWTTR 180
H N++ + + ++ ++ E M + +L + + + T R
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 181 -MKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKL--------- 230
+K+ G+ VI+RDLK SN+L+ +N D K+ DFGLA++
Sbjct: 124 AVKVLHGSN-------------VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 231 GPQGEKMNVTSRVMGTYGYCAPEYA-RSGELTVKSDVYSFGVILLELITGRRVI 283
P G++ +T V T Y APE S + + DV+S G IL EL R +
Sbjct: 171 EPTGQQSGMTEXV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 100/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT Y AP S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPAIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 34/234 (14%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLML 128
R + + +F+ + LLGEG +G V T + G++VA+K+++ + L E+ +L
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKIL 63
Query: 129 SLLHHPNLVNLIGY-----CADGDQRLLVYEFMSGG---SVDDHLLDVNETKKPLDWTTR 180
H N++ + + ++ ++ E M + +L + + + T R
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 181 -MKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKL--------- 230
+K+ G+ VI+RDLK SN+L+ +N D K+ DFGLA++
Sbjct: 124 AVKVLHGSN-------------VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 231 GPQGEKMNVTSRVMGTYGYCAPEYA-RSGELTVKSDVYSFGVILLELITGRRVI 283
P G++ +T V T Y APE S + + DV+S G IL EL R +
Sbjct: 171 EPTGQQSGMTEYV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV-EVLMLSLLH 132
AT + +G G +G VYK +G VA+K + NG +G V EV +L L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 133 ---HPNLVNLIGYCADG--DQRL---LVYEFMSGGSVDDHLLDVNETKKP--LDWTTRMK 182
HPN+V L+ CA D+ + LV+E VD L + P L T
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 183 IASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSR 242
+ +GL++LH +++RDLK NIL+ + KL+DFGLA++ ++
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALD---P 170
Query: 243 VMGTYGYCAPEYARSGELTVKSDVYSFGVILLELI 277
V+ T Y APE D++S G I E+
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 75 ATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLV-EVLMLSLLH 132
AT + +G G +G VYK +G VA+K + NG +G V EV +L L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 133 ---HPNLVNLIGYCADG--DQRL---LVYEFMSGGSVDDHLLDVNETKKP--LDWTTRMK 182
HPN+V L+ CA D+ + LV+E VD L + P L T
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 183 IASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSR 242
+ +GL++LH +++RDLK NIL+ + KL+DFGLA++ +M +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI--YSYQMALFPV 171
Query: 243 VMGTYGYCAPEYARSGELTVKSDVYSFGVILLELI 277
V+ T Y APE D++S G I E+
Sbjct: 172 VV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 100/247 (40%), Gaps = 17/247 (6%)
Query: 74 AATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSL 130
A F + LG G FGRV + G A+K LD+ + K+ L E +
Sbjct: 39 AHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 131 LHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQG 190
++ P LV L D +V E+ GG + HL + +P R A+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLT 154
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
EYLH + +IYRDLK N+L+ K++DFG AK T + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYL 206
Query: 251 APEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPD 310
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSS 264
Query: 311 MADPLLR 317
LLR
Sbjct: 265 DLKDLLR 271
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 25/208 (12%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
+LG+G +G VY G SN +A+K++ + ++ E+ + L H N+V +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLD----VNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
++ + E + GGS+ L + + ++ + + T+ + +GL+YLHD
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQ- 142
Query: 200 PPVIYRDLKSSNILLGANLDP-KLSDFG----LAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
+++RD+K N+L+ K+SDFG LA + P T GT Y APE
Sbjct: 143 --IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------CTETFTGTLQYMAPEI 194
Query: 255 ARSGE--LTVKSDVYSFGVILLELITGR 280
G +D++S G ++E+ TG+
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 100/248 (40%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P LV L D +V E+ GG + HL + +P R A+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+++ +++DFG AK T + GT Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 262
Query: 310 DMADPLLR 317
LLR
Sbjct: 263 SDLKDLLR 270
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 29/221 (13%)
Query: 78 NFRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFL 122
FRQE + LG G F V K + G+ A K + + + ++ E
Sbjct: 4 TFRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE 63
Query: 123 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMK 182
EV +L + HPN++ L + +L+ E +SGG + D L + K+ L +
Sbjct: 64 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQ 119
Query: 183 IASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDP----KLSDFGLAKLGPQGEKMN 238
G+ YLH K + + DLK NI+L P KL DFG+A G N
Sbjct: 120 FLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG---N 173
Query: 239 VTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSN---GQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNLI 140
+GEG FG V++G S VA+K +E FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G + + ++ E + G + L K LD + + A + L YL K
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
++RD+ + N+L+ +N KL DFGL++ + + + APE
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI-KWMAPESINFRRF 189
Query: 261 TVKSDVYSFGVILLELI 277
T SDV+ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQ----SNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG G FG V KG Q V + + + N E L E ++ L +P +V +I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G C + + +LV E G ++ +L K +++ + G++YL +
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEESN-- 489
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSG 258
++RDL + N+LL K+SDFGL+K + ++ ++ G + + APE
Sbjct: 490 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ + KSDV+SFGV++ E +
Sbjct: 548 KFSSKSDVWSFGVLMWEAFS 567
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSN---GQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNLI 140
+GEG FG V++G S VA+K +E FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G + + ++ E + G + L K LD + + A + L YL K
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
++RD+ + N+L+ +N KL DFGL++ + + + APE
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 189
Query: 261 TVKSDVYSFGVILLELI 277
T SDV+ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 99/248 (39%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P L L D +V E+ GG + HL + +P R A+
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+++ K++DFG AK T + GT Y
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 263
Query: 310 DMADPLLR 317
LLR
Sbjct: 264 SDLKDLLR 271
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 99/248 (39%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P L L D +V E+ GG + HL + +P R A+
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF-YAAQIVL 153
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+++ K++DFG AK T + GT Y
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 263
Query: 310 DMADPLLR 317
LLR
Sbjct: 264 SDLKDLLR 271
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 99/248 (39%), Gaps = 17/248 (6%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLS 129
A F + LG G FGRV G A+K LD+ + K+ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 130 LLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
++ P L L D +V E+ GG + HL + +P R A+
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGY 249
EYLH + +IYRDLK N+++ K++DFG AK T + GT Y
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 250 CAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
APE S D ++ GV++ E+ G +P+ I + R P F
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFS 263
Query: 310 DMADPLLR 317
LLR
Sbjct: 264 SDLKDLLR 271
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLVEVLMLSLLHHPNLVN 138
LG G F V K + G+ A K + + + ++ E EV +L + HPN++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
L + +L+ E +SGG + D L + K+ L + G+ YLH K
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKR 128
Query: 199 NPPVIYRDLKSSNILLGANLDP----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
+ + DLK NI+L P KL DFG+A G N + GT + APE
Sbjct: 129 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG---NEFKNIFGTPEFVAPEI 182
Query: 255 ARSGELTVKSDVYSFGVILLELITG 279
L +++D++S GVI L++G
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 31/268 (11%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRN-GMQGNKEFLVEV-LMLSLLHHPNLVNLIGY 142
LG G +G V K +GQ++AVK++ Q K L+++ + + + P V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ E M S+D V + + + KIA + LE+LH K + V
Sbjct: 75 LFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 131
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL-- 260
I+RD+K SN+L+ A K+ DFG++ ++ + G Y APE EL
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERINP-ELNQ 187
Query: 261 ---TVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
+VKSD++S G+ ++EL R D+ W P F+ K+ + P
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDS-----------WGTP-FQQLKQVVEEPSP--- 232
Query: 318 KQFP-EKGLNEAVAIAAMCLQEEAGARP 344
Q P +K E V + CL++ + RP
Sbjct: 233 -QLPADKFSAEFVDFTSQCLKKNSKERP 259
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQ----SNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG G FG V KG Q V + + + N E L E ++ L +P +V +I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G C + + +LV E G ++ +L K +++ + G++YL +
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEESN-- 490
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSG 258
++RDL + N+LL K+SDFGL+K + ++ ++ G + + APE
Sbjct: 491 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ + KSDV+SFGV++ E +
Sbjct: 549 KFSSKSDVWSFGVLMWEAFS 568
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSN---GQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNLI 140
+GEG FG V++G S VA+K +E FL E L + HP++V LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G + + ++ E + G + L K LD + + A + L YL K
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKR-- 511
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
++RD+ + N+L+ +N KL DFGL++ + + + APE
Sbjct: 512 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 569
Query: 261 TVKSDVYSFGVILLELI 277
T SDV+ FGV + E++
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSN---GQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNLI 140
+GEG FG V++G S VA+K +E FL E L + HP++V LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G + + ++ E + G + L K LD + + A + L YL K
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 128
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
++RD+ + N+L+ +N KL DFGL++ + + + APE
Sbjct: 129 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 186
Query: 261 TVKSDVYSFGVILLELI 277
T SDV+ FGV + E++
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSN---GQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNLI 140
+GEG FG V++G S VA+K +E FL E L + HP++V LI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G + + ++ E + G + L K LD + + A + L YL K
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 133
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
++RD+ + N+L+ +N KL DFGL++ + + + APE
Sbjct: 134 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 191
Query: 261 TVKSDVYSFGVILLELI 277
T SDV+ FGV + E++
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQ----SNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG G FG V KG Q V + + + N E L E ++ L +P +V +I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G C + + +LV E G ++ +L K +++ + G++YL +
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEESN-- 147
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSG 258
++RDL + N+LL K+SDFGL+K + ++ ++ G + + APE
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ + KSDV+SFGV++ E +
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQ----SNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG G FG V KG Q V + + + N E L E ++ L +P +V +I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G C + + +LV E G ++ +L K +++ + G++YL +
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEESN-- 147
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSG 258
++RDL + N+LL K+SDFGL+K + ++ ++ G + + APE
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ + KSDV+SFGV++ E +
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 100/236 (42%), Gaps = 17/236 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF---LVEVLMLSLLHHPNLVNLIG 141
LG G FGRV + +G A+K LD+ + K+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D +V E+++GG + HL + +P R A+ EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLD 161
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELT 261
+IYRDLK N+L+ +++DFG AK T + GT APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAPEIILSKGYN 216
Query: 262 VKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLLR 317
D ++ GV++ E+ G +P+ I + R P F LLR
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLR 270
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 73 AAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV-----EVLM 127
+ AT + +G G +G VYK +G VA+K + G L EV +
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 128 LSLLH---HPNLVNLIGYCADG--DQRL---LVYEFMSGGSVDDHLLDVNETKKP--LDW 177
L L HPN+V L+ CA D+ + LV+E VD L + P L
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPA 119
Query: 178 TTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKM 237
T + +GL++LH +++RDLK NIL+ + KL+DFGLA++ +M
Sbjct: 120 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI--YSYQM 174
Query: 238 NVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELI 277
+T V+ T Y APE D++S G I E+
Sbjct: 175 ALTPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSN---GQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNLI 140
+GEG FG V++G S VA+K +E FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G + + ++ E + G + L K LD + + A + L YL K
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
++RD+ + N+L+ +N KL DFGL++ + + + APE
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 189
Query: 261 TVKSDVYSFGVILLELI 277
T SDV+ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 43/231 (18%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
+F + +LG+G FG+V K + + A+K++ R+ + L EV++L+ L+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 138 NLIGYCADGDQRLLV---------------YEFMSGGSVDD--HLLDVNETKKPLDWTTR 180
Y A ++R V E+ G++ D H ++N+ + W
Sbjct: 66 RY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY-W--- 119
Query: 181 MKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA----------KL 230
++ + L Y+H + +I+RDLK NI + + + K+ DFGLA KL
Sbjct: 120 -RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 231 GPQ---GEKMNVTSRVMGTYGYCAPEYAR-SGELTVKSDVYSFGVILLELI 277
Q G N+TS + GT Y A E +G K D+YS G+I E+I
Sbjct: 176 DSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQ----SNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG G FG V KG Q V + + + N E L E ++ L +P +V +I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G C + + +LV E G ++ +L K +++ + G++YL +
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEESN-- 145
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSG 258
++RDL + N+LL K+SDFGL+K + ++ ++ G + + APE
Sbjct: 146 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ + KSDV+SFGV++ E +
Sbjct: 204 KFSSKSDVWSFGVLMWEAFS 223
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSN---GQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNLI 140
+GEG FG V++G S VA+K +E FL E L + HP++V LI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G + + ++ E + G + L K LD + + A + L YL K
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 134
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
++RD+ + N+L+ +N KL DFGL++ + + + APE
Sbjct: 135 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 192
Query: 261 TVKSDVYSFGVILLELI 277
T SDV+ FGV + E++
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 83 CLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+LG+G +G VY G SN +A+K++ + ++ E+ + L H N+V +G
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLD----VNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
++ + E + GGS+ L + + ++ + + T+ + +GL+YLHD
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQ 128
Query: 199 NPPVIYRDLKSSNILLGANLDP-KLSDFG----LAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+++RD+K N+L+ K+SDFG LA + P T GT Y APE
Sbjct: 129 ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------CTETFTGTLQYMAPE 179
Query: 254 YARSGE--LTVKSDVYSFGVILLELITGR 280
G +D++S G ++E+ TG+
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQ----SNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG G FG V KG Q V + + + N E L E ++ L +P +V +I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G C + + +LV E G ++ +L K +++ + G++YL +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEESN-- 131
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSG 258
++RDL + N+LL K+SDFGL+K + ++ ++ G + + APE
Sbjct: 132 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ + KSDV+SFGV++ E +
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSN---GQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNLI 140
+GEG FG V++G S VA+K +E FL E L + HP++V LI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G + + ++ E + G + L K LD + + A + L YL K
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 159
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
++RD+ + N+L+ +N KL DFGL++ + + + APE
Sbjct: 160 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 217
Query: 261 TVKSDVYSFGVILLELI 277
T SDV+ FGV + E++
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 17/227 (7%)
Query: 61 NINAQTFTFRELAAATK---NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQG 117
++ + F+ +A T+ +++ LG+G F V + ++ Q A K ++ +
Sbjct: 12 DLGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA 71
Query: 118 --NKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPL 175
+++ E + LL HPN+V L ++ LV++ ++GG + + ++
Sbjct: 72 RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV-------AR 124
Query: 176 DWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLD---PKLSDFGLAKLGP 232
++ + + Q LE ++ +++RDLK N+LL + KL+DFGLA +
Sbjct: 125 EYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEV 183
Query: 233 QGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
QGE+ GT GY +PE R D+++ GVIL L+ G
Sbjct: 184 QGEQQAWFG-FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSN---GQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNLI 140
+GEG FG V++G S VA+K +E FL E L + HP++V LI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G + + ++ E + G + L K LD + + A + L YL K
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 136
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
++RD+ + N+L+ +N KL DFGL++ + + + APE
Sbjct: 137 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 194
Query: 261 TVKSDVYSFGVILLELI 277
T SDV+ FGV + E++
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 32/221 (14%)
Query: 82 ECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
EC+ G+G +G V++G+ Q G+ VAVK R+ +E E+ +L H N++ I
Sbjct: 14 ECV-GKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFI 68
Query: 141 GYCA----DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH- 195
Q L+ + GS+ D+L LD + ++I A GL +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 196 ----DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTS--RVMGTYG 248
+ P + +RDLKS NIL+ N ++D GLA + Q +++V + RV GT
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKR 182
Query: 249 YCAPEY------ARSGELTVKSDVYSFGVILLELITGRRVI 283
Y APE + + D+++FG++L E+ RR++
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 221
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 39/276 (14%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLS 129
R +A + +Q +G+G +G V+ G + G+ VAVK + + E+
Sbjct: 33 RTIAKQIQMVKQ---IGKGRYGEVWMG--KWRGEKVAVKVFFTTE-EASWFRETEIYQTV 86
Query: 130 LLHHPNLVNLIGYCADGD----QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIAS 185
L+ H N++ I G Q L+ ++ GS+ D+L LD + +K+A
Sbjct: 87 LMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-----LDAKSMLKLAY 141
Query: 186 GAAQGLEYLHD-----KANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNV 239
+ GL +LH + P + +RDLKS NIL+ N ++D GLA K ++++
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDI 201
Query: 240 --TSRVMGTYGYCAPEYARSG------ELTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
+RV GT Y PE + + +D+YSFG+IL E+ RR + + + E
Sbjct: 202 PPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCV--SGGIVE 256
Query: 292 QNLIAWAQPIFRDPKRFPDMADPL----LRKQFPEK 323
+ + + + DP + DM + + LR FP +
Sbjct: 257 EYQLPYHDLVPSDPS-YEDMREIVCIKKLRPSFPNR 291
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLVEVLMLSLLHHPNLVN 138
LG G F V K + G+ A K + + + ++ E EV +L + HPN++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
L + +L+ E +SGG + D L + K+ L + G+ YLH K
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKR 149
Query: 199 NPPVIYRDLKSSNILLGANLDP----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
+ + DLK NI+L P KL DFG+A + E N + GT + APE
Sbjct: 150 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNEFKNIFGTPEFVAPEI 203
Query: 255 ARSGELTVKSDVYSFGVILLELITG 279
L +++D++S GVI L++G
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 32/221 (14%)
Query: 82 ECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
EC+ G+G +G V++G+ Q G+ VAVK R+ +E E+ +L H N++ I
Sbjct: 14 ECV-GKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFI 68
Query: 141 GYCA----DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH- 195
Q L+ + GS+ D+L LD + ++I A GL +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 196 ----DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTS--RVMGTYG 248
+ P + +RDLKS NIL+ N ++D GLA + Q +++V + RV GT
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKR 182
Query: 249 YCAPEY------ARSGELTVKSDVYSFGVILLELITGRRVI 283
Y APE + + D+++FG++L E+ RR++
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 221
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSN---GQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNLI 140
+GEG FG V++G S VA+K +E FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G + + ++ E + G + L K LD + + A + L YL K
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
++RD+ + N+L+ A KL DFGL++ + + + APE
Sbjct: 132 -FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 189
Query: 261 TVKSDVYSFGVILLELI 277
T SDV+ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQ----SNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG G FG V KG Q V + + + N E L E ++ L +P +V +I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G C + + +LV E G ++ +L K +++ + G++YL +
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEESN-- 137
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSG 258
++RDL + N+LL K+SDFGL+K + ++ ++ G + + APE
Sbjct: 138 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ + KSDV+SFGV++ E +
Sbjct: 196 KFSSKSDVWSFGVLMWEAFS 215
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQ----SNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG G FG V KG Q V + + + N E L E ++ L +P +V +I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G C + + +LV E G ++ +L K +++ + G++YL +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEESN-- 131
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSG 258
++RDL + N+LL K+SDFGL+K + ++ ++ G + + APE
Sbjct: 132 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ + KSDV+SFGV++ E +
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 34/234 (14%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLML 128
R + + +F+ + LLGEG +G V T + G++VA+K+++ + L E+ +L
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKIL 63
Query: 129 SLLHHPNLVNLIGY-----CADGDQRLLVYEFMSGG---SVDDHLLDVNETKKPLDWTTR 180
H N++ + + ++ ++ E M + +L + + + T R
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 181 -MKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKL--------- 230
+K+ G+ VI+RDLK SN+L+ +N D K+ DFGLA++
Sbjct: 124 AVKVLHGSN-------------VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 231 GPQGEKMNVTSRVMGTYGYCAPEYA-RSGELTVKSDVYSFGVILLELITGRRVI 283
P G++ + V T Y APE S + + DV+S G IL EL R +
Sbjct: 171 EPTGQQSGMVEFV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQ----SNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG G FG V KG Q V + + + N E L E ++ L +P +V +I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G C + + +LV E G ++ +L K +++ + G++YL +
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEESN-- 125
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSG 258
++RDL + N+LL K+SDFGL+K + ++ ++ G + + APE
Sbjct: 126 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ + KSDV+SFGV++ E +
Sbjct: 184 KFSSKSDVWSFGVLMWEAFS 203
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 16/208 (7%)
Query: 84 LLGEGGFGRVYKGTL-QSNGQVV--AVKQLDRNGMQGN--KEFLVEVLMLSLLHHPNLVN 138
+LG+G FG V + L Q +G V AVK L + + + +EFL E + HP++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 139 LIGYCADGDQR------LLVYEFMSGGSVDDHLL--DVNETKKPLDWTTRMKIASGAAQG 190
L+G + +++ FM G + LL + E L T ++ A G
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
+EYL + I+RDL + N +L ++ ++DFGL++ G+ +
Sbjct: 150 MEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL 206
Query: 251 APEYARSGELTVKSDVYSFGVILLELIT 278
A E TV SDV++FGV + E++T
Sbjct: 207 ALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC- 143
LGEGGF V +G A+K++ + Q +E E M L +HPN++ L+ YC
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 144 ---ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
+ L+ F G++ + + + + L + + G +GLE +H K
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-- 154
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFG---LAKLGPQGEKMNVTSRVMG----TYGYCAPE 253
+RDLK +NILLG P L D G A + +G + +T + T Y APE
Sbjct: 155 -YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213
Query: 254 YARSGELTV---KSDVYSFGVILLELITG 279
V ++DV+S G +L ++ G
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQ----SNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
LG G FG V KG Q V + + + N E L E ++ L +P +V +I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G C + + +LV E G ++ +L K +++ + G++YL +
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEESN-- 127
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY--GYCAPEYARSG 258
++RDL + N+LL K+SDFGL+K + ++ ++ G + + APE
Sbjct: 128 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 259 ELTVKSDVYSFGVILLELIT 278
+ + KSDV+SFGV++ E +
Sbjct: 186 KFSSKSDVWSFGVLMWEAFS 205
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Query: 85 LGEGGFGRVYKGTLQSN---GQVVAVKQLDRNGMQGNKE-FLVEVLMLSLLHHPNLVNLI 140
+GEG FG V++G S VA+K +E FL E L + HP++V LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 141 GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANP 200
G + + ++ E + G + L K LD + + A + L YL K
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKR-- 511
Query: 201 PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
++RD+ + N+L+ A KL DFGL++ + + + APE
Sbjct: 512 -FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 569
Query: 261 TVKSDVYSFGVILLELI 277
T SDV+ FGV + E++
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 32/221 (14%)
Query: 82 ECLLGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
EC+ G+G +G V++G+ Q G+ VAVK R+ +E E+ +L H N++ I
Sbjct: 43 ECV-GKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFI 97
Query: 141 GYCA----DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH- 195
Q L+ + GS+ D+L LD + ++I A GL +LH
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 196 ----DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQG-EKMNVTS--RVMGTYG 248
+ P + +RDLKS NIL+ N ++D GLA + Q +++V + RV GT
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKR 211
Query: 249 YCAPEY------ARSGELTVKSDVYSFGVILLELITGRRVI 283
Y APE + + D+++FG++L E+ RR++
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 250
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLVEVLMLSLLHHPNLVN 138
LG G F V K +S G A K + + + ++ E EV +L + HPN++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
L + +L+ E +SGG L D K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 199 NPPVIYRDLKSSNILLGANLDP----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
+ + DLK NI+L P KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEI 189
Query: 255 ARSGELTVKSDVYSFGVILLELITG 279
L +++D++S GVI L++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVL-----MLSLLHHPNLVN 138
++G+G F V + + GQ AVK +D + E L + +L HP++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 139 LI-GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
L+ Y +DG +V+EFM G + ++ + + L Y HD
Sbjct: 91 LLETYSSDG-MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 198 ANPPVIYRDLKSSNILLGA--NLDP-KLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAPE 253
+I+RD+K N+LL + N P KL DFG+A +LG G + RV GT + APE
Sbjct: 150 N---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG--LVAGGRV-GTPHFMAPE 203
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
+ DV+ GVIL L++G
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
+G+G FG V++G + G+ VAVK R +E E+ +L H N++ I
Sbjct: 12 IGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA-- 65
Query: 144 ADGD------QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH-- 195
AD Q LV ++ GS+ D+L T + + +K+A A GL +LH
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 120
Query: 196 ---DKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVT-SRVMGTYGYC 250
+ P + +RDLKS NIL+ N ++D GLA + + +++ + +GT Y
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 251 APEY------ARSGELTVKSDVYSFGVILLEL 276
APE + E ++D+Y+ G++ E+
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 106
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + HL+ + K + L +GL+Y+H AN
Sbjct: 107 -NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 164
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 165 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
+G+G FG V++G + G+ VAVK R +E E+ +L H N++ I
Sbjct: 11 IGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA-- 64
Query: 144 ADGD------QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH-- 195
AD Q LV ++ GS+ D+L T + + +K+A A GL +LH
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 119
Query: 196 ---DKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVT-SRVMGTYGYC 250
+ P + +RDLKS NIL+ N ++D GLA + + +++ + +GT Y
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 251 APEY------ARSGELTVKSDVYSFGVILLEL 276
APE + E ++D+Y+ G++ E+
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
+G+G FG V++G + G+ VAVK R +E E+ +L H N++ I
Sbjct: 17 IGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA-- 70
Query: 144 ADGD------QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH-- 195
AD Q LV ++ GS+ D+L T + + +K+A A GL +LH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 125
Query: 196 ---DKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVT-SRVMGTYGYC 250
+ P + +RDLKS NIL+ N ++D GLA + + +++ + +GT Y
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 251 APEY------ARSGELTVKSDVYSFGVILLEL 276
APE + E ++D+Y+ G++ E+
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQG--NKEFLVEVLMLSLLHHPNLVNLIGY 142
LG+G F V + GQ A K ++ + +++ E + LL HPN+V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
++ L+++ ++GG + + ++ ++ + + Q LE + V
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIV-------AREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 203 IYRDLKSSNILLGANLD---PKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++RDLK N+LL + L KL+DFGLA + +GE+ GT GY +PE R
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFG-FAGTPGYLSPEVLRKDP 200
Query: 260 LTVKSDVYSFGVILLELITG 279
D+++ GVIL L+ G
Sbjct: 201 YGKPVDLWACGVILYILLVG 220
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
+G+G FG V++G + G+ VAVK R +E E+ +L H N++ I
Sbjct: 14 IGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA-- 67
Query: 144 ADGD------QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH-- 195
AD Q LV ++ GS+ D+L T + + +K+A A GL +LH
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 122
Query: 196 ---DKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVT-SRVMGTYGYC 250
+ P + +RDLKS NIL+ N ++D GLA + + +++ + +GT Y
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 251 APEY------ARSGELTVKSDVYSFGVILLEL 276
APE + E ++D+Y+ G++ E+
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI---- 88
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 89 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 146
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 147 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 144
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 145 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
+G+G FG V++G + G+ VAVK R +E E+ +L H N++ I
Sbjct: 37 IGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA-- 90
Query: 144 ADGD------QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH-- 195
AD Q LV ++ GS+ D+L T + + +K+A A GL +LH
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 145
Query: 196 ---DKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVT-SRVMGTYGYC 250
+ P + +RDLKS NIL+ N ++D GLA + + +++ + +GT Y
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 251 APEY------ARSGELTVKSDVYSFGVILLEL 276
APE + E ++D+Y+ G++ E+
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 88
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 89 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 146
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 147 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+GEG +G V+K + ++VA+K+ LD + L E+ +L L H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ LV+EF D + LD +GL + H + V
Sbjct: 70 LHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
++RDLK N+L+ N + KL+DFGLA+ G + S + T Y P+ +L
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 263 KS-DVYSFGVILLELITGRRVIDTTRPVDEQ 292
S D++S G I EL R + VD+Q
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQ 211
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 144
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 145 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH-SAN 148
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 106
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 107 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 164
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 165 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLD-RNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
+G+G FG V++G + G+ VAVK R +E E+ +L H N++ I
Sbjct: 50 IGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA-- 103
Query: 144 ADGD------QRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH-- 195
AD Q LV ++ GS+ D+L T + + +K+A A GL +LH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 158
Query: 196 ---DKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVT-SRVMGTYGYC 250
+ P + +RDLKS NIL+ N ++D GLA + + +++ + +GT Y
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 251 APEY------ARSGELTVKSDVYSFGVILLEL 276
APE + E ++D+Y+ G++ E+
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 94
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 95 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 152
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 153 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 248
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 144
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 145 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 91
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 92 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 149
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 150 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 92
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 93 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 150
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 151 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 246
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 83
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 84 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 141
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 142 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 237
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 148
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 84
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 85 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 142
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 143 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 144
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 145 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRN-GMQGNKEFLVEV-LMLSLLHHPNLVNLIGY 142
+G G +G V K + +GQ++AVK++ + K+ L+++ +++ P +V G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 143 CADGDQRLLVYEFMSGGSVDD---HLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ E MS S D ++ V + P + ++ +A+ A H K N
Sbjct: 90 LFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALN----HLKEN 144
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMN--VTSRVMGTYGYCAPEY--- 254
+I+RD+K SNILL + + KL DFG++ G+ ++ +R G Y APE
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGIS-----GQLVDSIAKTRDAGCRPYMAPERIDP 199
Query: 255 --ARSGELTVKSDVYSFGVILLELITGR 280
+R G V+SDV+S G+ L EL TGR
Sbjct: 200 SASRQG-YDVRSDVWSLGITLYELATGR 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 84
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 85 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 142
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 143 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 148
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 149 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 17/221 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V + GQ VA+K++ + + K L E+ +L H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI--- 119
Query: 143 CADGDQRLLVY-EFMSGGSVDD----HLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
D + + Y EF S V D L + + +PL +GL+Y+H
Sbjct: 120 -KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA 178
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAK--LGPQGEKMNVTSRVMGTYGYCAPEYA 255
VI+RDLK SN+L+ N + K+ DFG+A+ E + + T Y APE
Sbjct: 179 Q---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 256 RS-GELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
S E T D++S G I E++ R++ V + LI
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 276
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 43/231 (18%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
+F + +LG+G FG+V K + + A+K++ R+ + L EV++L+ L+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 138 NLIGYCADGDQRLLV---------------YEFMSGGSVDD--HLLDVNETKKPLDWTTR 180
Y A ++R V E+ ++ D H ++N+ + W
Sbjct: 66 RY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY-W--- 119
Query: 181 MKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA----------KL 230
++ + L Y+H + +I+RDLK NI + + + K+ DFGLA KL
Sbjct: 120 -RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 231 GPQ---GEKMNVTSRVMGTYGYCAPEYAR-SGELTVKSDVYSFGVILLELI 277
Q G N+TS + GT Y A E +G K D+YS G+I E+I
Sbjct: 176 DSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQG-NKEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGI---- 90
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 148
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 149 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 144
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 145 --VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI---- 88
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 89 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 146
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 147 --VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 48/295 (16%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 148
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 149 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 195
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ E+ + D++S G I+ EL+TGR + T +D+ LI +
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL---------RLVG 246
Query: 310 DMADPLLRKQFPEKGLNEAVAIAAMCLQEEA----GARPLMSDVVTALSFLSNSK 360
LL+K E N ++A M A GA PL D++ + L + K
Sbjct: 247 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 301
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLH-HPNLVNLIGY 142
LLGEG + +V NG+ AVK +++ EV L + N++ LI +
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
D + LV+E + GGS+ H+ + +K + ++ A L++LH K +
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHI----QKQKHFNEREASRVVRDVAAALDFLHTKG---I 132
Query: 203 IYRDLKSSNILLGA--NLDP-KLSDFGLAKLGPQGEKMN-----VTSRVM----GTYGYC 250
+RDLK NIL + + P K+ DF L G K+N +T+ + G+ Y
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLG----SGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 251 APEYAR--SGELTV---KSDVYSFGVILLELITG 279
APE + + T + D++S GV+L +++G
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 173
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 FKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 48/295 (16%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 152
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 153 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 199
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ E+ + D++S G I+ EL+TGR + T +D+ LI +
Sbjct: 200 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL---------RLVG 250
Query: 310 DMADPLLRKQFPEKGLNEAVAIAAMCLQEEA----GARPLMSDVVTALSFLSNSK 360
LL+K E N ++A M A GA PL D++ + L + K
Sbjct: 251 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 305
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 48/295 (16%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ E+ + D++S G I+ EL+TGR + T +D+ LI +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL---------RLVG 240
Query: 310 DMADPLLRKQFPEKGLNEAVAIAAMCLQEEA----GARPLMSDVVTALSFLSNSK 360
LL+K E N ++A M A GA PL D++ + L + K
Sbjct: 241 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 17/221 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V + GQ VA+K++ + + K L E+ +L H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI--- 118
Query: 143 CADGDQRLLVY-EFMSGGSVDD----HLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
D + + Y EF S V D L + + +PL +GL+Y+H
Sbjct: 119 -KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA 177
Query: 198 ANPPVIYRDLKSSNILLGANLDPKLSDFGLAK--LGPQGEKMNVTSRVMGTYGYCAPEYA 255
VI+RDLK SN+L+ N + K+ DFG+A+ E + + T Y APE
Sbjct: 178 Q---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 256 RS-GELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
S E T D++S G I E++ R++ V + LI
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 275
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 48/295 (16%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 161
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 162 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 208
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ E+ + D++S G I+ EL+TGR + T +D+ LI +
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL---------RLVG 259
Query: 310 DMADPLLRKQFPEKGLNEAVAIAAMCLQEEA----GARPLMSDVVTALSFLSNSK 360
LL+K E N ++A M A GA PL D++ + L + K
Sbjct: 260 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 314
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 15/224 (6%)
Query: 79 FRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLV 137
+ Q +GEG +G V VA+K++ Q + L E+ +L H N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEY 193
+ R E M + L++ + K + L +GL+Y
Sbjct: 105 GIRDIL-----RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKY 159
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAP 252
+H AN V++RDLK SN+L+ D K+ DFGLA++ P+ + + + T Y AP
Sbjct: 160 IH-SAN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 253 EYARSGELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
E + + KS D++S G IL E+++ R + +D+ N I
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 148
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + T Y APE +
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA+K++ Q + L E+ +L H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 91
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 92 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 149
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + T Y APE +
Sbjct: 150 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLLHHPNLVNLIGYC 143
+GEG +G V N VA++++ Q + L E+ +L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETK----KPLDWTTRMKIASGAAQGLEYLHDKAN 199
+ R E M + L++ + K + L +GL+Y+H AN
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SAN 148
Query: 200 PPVIYRDLKSSNILLGANLDPKLSDFGLAKLG-PQGEKMNVTSRVMGTYGYCAPEYARSG 258
V++RDLK SN+LL D K+ DFGLA++ P + + + T Y APE +
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 259 ELTVKS-DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ KS D++S G IL E+++ R + +D+ N I
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 48/295 (16%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 138
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 139 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 185
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ E+ + D++S G I+ EL+TGR + T +D+ LI +
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL---------RLVG 236
Query: 310 DMADPLLRKQFPEKGLNEAVAIAAMCLQEEA----GARPLMSDVVTALSFLSNSK 360
LL+K E N ++A M A GA PL D++ + L + K
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 291
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 132/316 (41%), Gaps = 48/316 (15%)
Query: 66 TFTFRELAAAT----KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNK 119
TF +ELA + ++ +G G +G V G VAVK+L R + K
Sbjct: 3 TFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 120 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLL--DVNETKKPLDW 177
E+ +L + H N++ L+ E + + HL+ D+N K
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCAKL 118
Query: 178 TTRMK--IASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGE 235
T + +GL+Y+H + +I+RDLK SN+ + + + K+ DFGLA+ +
Sbjct: 119 TDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDD 173
Query: 236 KMNVTSRVMGTYGYCAPEYARSGELTV-------KSDVYSFGVILLELITGRRVIDTTRP 288
+M GY A + R+ E+ + D++S G I+ EL+TGR + T
Sbjct: 174 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Query: 289 VDEQNLIAWAQPIFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEA----GARP 344
+D+ LI + LL+K E N ++A M A GA P
Sbjct: 225 IDQLKLIL---------RLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANP 275
Query: 345 LMSDVVTALSFLSNSK 360
L D++ + L + K
Sbjct: 276 LAVDLLEKMLVLDSDK 291
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 48/295 (16%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 162
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 163 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 209
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFP 309
+ E+ + D++S G I+ EL+TGR + T +D+ LI +
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL---------RLVG 260
Query: 310 DMADPLLRKQFPEKGLNEAVAIAAMCLQEEA----GARPLMSDVVTALSFLSNSK 360
LL+K E N ++A M A GA PL D++ + L + K
Sbjct: 261 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 315
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 52/256 (20%)
Query: 72 LAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM-----QGNKEFLVEVL 126
L K + + +G+G +G V + A+K +++N + + + EV
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 127 MLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHL------------LDVNET--- 171
++ LHHPN+ L D LV E GG + D L +DV +T
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 172 -----------------KKPLDWTTRMKIASGAAQ----GLEYLHDKANPPVIYRDLKSS 210
++ LD+ R K+ S + L YLH++ + +RD+K
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPE 197
Query: 211 NILLGAN--LDPKLSDFGLAKLGPQ---GEKMNVTSRVMGTYGYCAPEYARSGELTV--K 263
N L N + KL DFGL+K + GE +T++ GT + APE + + K
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPK 256
Query: 264 SDVYSFGVILLELITG 279
D +S GV+L L+ G
Sbjct: 257 CDAWSAGVLLHLLLMG 272
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTVKS-------DVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 173
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQG--NKEFLVEVLMLSLLHHPNLVNLIGY 142
LG+G F V + GQ A K ++ + +++ E + LL HPN+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
++ LV++ ++GG + + ++ ++ + + Q LE ++ +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV-------AREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 203 IYRDLKSSNILLGAN---LDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++RDLK N+LL + KL+DFGLA + QG++ GT GY +PE R
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFG-FAGTPGYLSPEVLRKDP 182
Query: 260 LTVKSDVYSFGVILLELITG 279
D+++ GVIL L+ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 173
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 118
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 119 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 172
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 173 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 149
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 150 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMT---------GYVATRWYR 196
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 4 FRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 173
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 149
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 150 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMT---------GYVATRWYR 196
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 149
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 150 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMT---------GYVATRWYR 196
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 118
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 119 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 172
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 173 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+GEG +G V+K + ++VA+K+ LD + L E+ +L L H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ LV+EF D + LD +GL + H + V
Sbjct: 70 LHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 203 IYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
++RDLK N+L+ N + KL++FGLA+ G + S + T Y P+ +L
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 263 KS-DVYSFGVILLELITGRRVIDTTRPVDEQ 292
S D++S G I EL R + VD+Q
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ +VY + V + + V + K+ L + L Y+H
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 143 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SXICSRY-YRAPE 192
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 253 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 74 AATKNFRQECLLGEGGFGRVY---KGTLQSNGQVVAVKQLDRNGM----QGNKEFLVEVL 126
+NF +LG G +G+V+ K + G++ A+K L + + + + E
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 127 MLSLLHHPNLVNLIGYCADGDQRL-LVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIAS 185
+L + + + Y + +L L+ ++++GG + HL ++ ++ + ++ +
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL---SQRERFTEHEVQIYVGE 167
Query: 186 GAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM- 244
LE+LH +IYRD+K NILL +N L+DFGL+K E T R
Sbjct: 168 -IVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE----TERAYD 219
Query: 245 --GTYGYCAPEYARSGE--LTVKSDVYSFGVILLELITG 279
GT Y AP+ R G+ D +S GV++ EL+TG
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 173
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 173
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 147
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 148 --SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMT---------GYVATRWYR 194
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 148
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 149 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 195
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E M V D L D + L + ++A S Q LE +
Sbjct: 75 VIRLLDWFERPDSFVLILERME--PVQD-LFDFITERGAL----QEELARSFFWQVLEAV 127
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 183
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 243
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 244 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 277
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 173
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQG--NKEFLVEVLMLSLLHHPNLVNLIGY 142
LG+G F V + GQ A K ++ + +++ E + LL HPN+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
++ LV++ ++GG + + ++ ++ + + Q LE ++ +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV-------AREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 203 IYRDLKSSNILLGAN---LDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++RDLK N+LL + KL+DFGLA + QG++ GT GY +PE R
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFG-FAGTPGYLSPEVLRKDP 182
Query: 260 LTVKSDVYSFGVILLELITG 279
D+++ GVIL L+ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 4 FRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 173
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 147
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 148 --SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMT---------GYVATRWYR 194
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 149
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 150 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 196
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 15/199 (7%)
Query: 85 LGEGGFGRVYKGTLQSN-GQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIG 141
+GEG +G VYK Q+N G+ A+K+ L++ + E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
+ +LV+E + LLDV E L+ T G+ Y HD+
Sbjct: 68 VIHTKKRLVLVFEHLDQDL--KKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDRR--- 120
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR-SGEL 260
V++RDLK N+L+ + K++DFGLA+ G + + + T Y AP+ S +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 261 TVKSDVYSFGVILLELITG 279
+ D++S G I E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 173
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 144
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 145 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 191
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 36/289 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 162
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ V +R Y APE
Sbjct: 163 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WYRAPEIML 215
Query: 257 SG-ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPL 315
+ D++S G I+ EL+TGR + T +D+ LI + L
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL---------RLVGTPGAEL 266
Query: 316 LRKQFPEKGLNEAVAIAAMCLQEEA----GARPLMSDVVTALSFLSNSK 360
L+K E N ++A M A GA PL D++ + L + K
Sbjct: 267 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 315
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 147
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 148 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 194
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 173
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 141
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 142 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 188
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 189 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 234
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKXQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 173
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKXQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 148
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 149 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 195
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 147
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 148 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 194
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 144
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 145 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 191
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 144
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 145 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 191
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 154
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 155 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 201
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 154
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 155 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 201
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 15/199 (7%)
Query: 85 LGEGGFGRVYKGTLQSN-GQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIG 141
+GEG +G VYK Q+N G+ A+K+ L++ + E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
+ +LV+E + LLDV E L+ T G+ Y HD+
Sbjct: 68 VIHTKKRLVLVFEHLDQDL--KKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDRR--- 120
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR-SGEL 260
V++RDLK N+L+ + K++DFGLA+ G + + + T Y AP+ S +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 261 TVKSDVYSFGVILLELITG 279
+ D++S G I E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 140
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 141 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 187
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 233
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQG--NKEFLVEVLMLSLLHHPNLVNLIGY 142
LG+G F V + GQ A ++ + +++ E + LL HPN+V L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
++ L+++ ++GG + + ++ ++ + + Q LE + V
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIV-------AREYYSEADASHCIQQILEAVLHCHQMGV 131
Query: 203 IYRDLKSSNILLGANLD---PKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++R+LK N+LL + L KL+DFGLA + +GE+ GT GY +PE R
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFG-FAGTPGYLSPEVLRKDP 189
Query: 260 LTVKSDVYSFGVILLELITG 279
D+++ GVIL L+ G
Sbjct: 190 YGKPVDLWACGVILYILLVG 209
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 53/243 (21%)
Query: 68 TFRELAAATKNFRQEC-----------LLGEGGFGRVYKGTLQSNGQVVAVKQLD--RNG 114
+F A+ T F QE L+G+G FG+VY G VA++ +D R+
Sbjct: 13 SFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERDN 69
Query: 115 MQGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGS----VDDH--LLDV 168
K F EV+ H N+V +G C ++ G + V D +LDV
Sbjct: 70 EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDV 129
Query: 169 NETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA 228
N+T+ +IA +G+ YLH K ++++DLKS N+ N ++DFGL
Sbjct: 130 NKTR---------QIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLF 176
Query: 229 KL------GPQGEKMNVTSRVMGTYGYCAPEYARSGE---------LTVKSDVYSFGVIL 273
+ G + +K+ + + G + APE R + SDV++ G I
Sbjct: 177 SISGVLQAGRREDKLRIQN---GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIW 233
Query: 274 LEL 276
EL
Sbjct: 234 YEL 236
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 153
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 154 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 200
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 139
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 140 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 186
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 15/199 (7%)
Query: 85 LGEGGFGRVYKGTLQSN-GQVVAVKQ--LDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIG 141
+GEG +G VYK Q+N G+ A+K+ L++ + E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
+ +LV+E + LLDV E L+ T G+ Y HD+
Sbjct: 68 VIHTKKRLVLVFEHLDQDL--KKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDRR--- 120
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR-SGEL 260
V++RDLK N+L+ + K++DFGLA+ G + + + T Y AP+ S +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 261 TVKSDVYSFGVILLELITG 279
+ D++S G I E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 138
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 139 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 185
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 139
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 140 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 186
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 36/289 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ + + + T Y APE
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIML 195
Query: 257 SG-ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPL 315
+ D++S G I+ EL+TGR + T +D+ LI + L
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL---------RLVGTPGAEL 246
Query: 316 LRKQFPEKGLNEAVAIAAMCLQEEA----GARPLMSDVVTALSFLSNSK 360
L+K E N ++A M A GA PL D++ + L + K
Sbjct: 247 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 162
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 163 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 209
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 36/289 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 138
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ + + + T Y APE
Sbjct: 139 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIML 191
Query: 257 SG-ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPL 315
+ D++S G I+ EL+TGR + T +D+ LI + L
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL---------RLVGTPGAEL 242
Query: 316 LRKQFPEKGLNEAVAIAAMCLQEEA----GARPLMSDVVTALSFLSNSK 360
L+K E N ++A M A GA PL D++ + L + K
Sbjct: 243 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 291
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 153
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 154 --SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMT---------GYVATRWYR 200
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE---FLVEVL 126
R+L +++ ++G G FG V +S +V A+K L + M + F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 127 MLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHL--LDVNETKKPLDWTTRMKIA 184
+++ + P +V L D +V E+M GG + + + DV E K +T + +A
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLA 180
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRV 243
A + ++H RD+K N+LL + KL+DFG K+ +G M
Sbjct: 181 LDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTA 229
Query: 244 MGTYGYCAPEYARS----GELTVKSDVYSFGVILLELITG 279
+GT Y +PE +S G + D +S GV L E++ G
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 161
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 162 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 208
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 116
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 176
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 177 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SXICSRY-YRAPE 226
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 287 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 328
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 110
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 170
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 171 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SYICSRY-YRAPE 220
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 280
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 281 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 322
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 33/269 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSL--LHHPNLVNLIG- 141
LG G +G V K +GQ+ AVK++ ++ L+ L +S + P V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
+GD + + + S+D V + + + KIA + LE+LH K +
Sbjct: 102 LFREGD--VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 157
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL- 260
VI+RD+K SN+L+ A K DFG++ ++ + G Y APE EL
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA---GCKPYXAPERINP-ELN 213
Query: 261 ----TVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMADPLL 316
+VKSD++S G+ +EL R D+ W P F+ K+ + P
Sbjct: 214 QKGYSVKSDIWSLGITXIELAILRFPYDS-----------WGTP-FQQLKQVVEEPSP-- 259
Query: 317 RKQFP-EKGLNEAVAIAAMCLQEEAGARP 344
Q P +K E V + CL++ + RP
Sbjct: 260 --QLPADKFSAEFVDFTSQCLKKNSKERP 286
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 165
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 166 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 212
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE---FLVEVL 126
R+L +++ ++G G FG V +S +V A+K L + M + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 127 MLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHL--LDVNETKKPLDWTTRMKIA 184
+++ + P +V L D +V E+M GG + + + DV E K +T + +A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLA 185
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRV 243
A + ++H RD+K N+LL + KL+DFG K+ +G M
Sbjct: 186 LDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTA 234
Query: 244 MGTYGYCAPEYARS----GELTVKSDVYSFGVILLELITG 279
+GT Y +PE +S G + D +S GV L E++ G
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 116
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 176
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 177 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SYICSRY-YRAPE 226
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 287 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 328
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 165
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 166 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMX---------GYVATRWYR 212
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 118
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 178
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 179 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SYICSRY-YRAPE 228
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 288
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 289 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 330
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 79 FRQECL---------LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLV 123
FRQE + LG G F V K +S G A K + + + ++ +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
EV +L + HPN++ L + +L+ E ++GG + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPK----LSDFGLAKLGPQGEKMNV 239
G+ YLH + + + DLK NI+L PK + DFGLA G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NE 173
Query: 240 TSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ GT + APE L +++D++S GVI L++G
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ + + + T Y APE
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIML 195
Query: 257 SG-ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ D++S G I+ EL+TGR + T +D+ LI
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLVEVLMLSLLHHPNLVN 138
LG G F V K +S G A K + + + ++ E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
L + +L+ E +SGG L D K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 199 NPPVIYRDLKSSNILLGANLDP----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
+ + DLK NI+L P KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEI 189
Query: 255 ARSGELTVKSDVYSFGVILLELITG 279
L +++D++S GVI L++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 120
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 180
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 181 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SYICSRY-YRAPE 230
Query: 254 YARSG-ELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 290
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 291 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 332
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLVEVLMLSLLHHPNLVN 138
LG G F V K +S G A K + + + ++ E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
L + +L+ E +SGG L D K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 199 NPPVIYRDLKSSNILLGANLDP----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
+ + DLK NI+L P KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEI 189
Query: 255 ARSGELTVKSDVYSFGVILLELITG 279
L +++D++S GVI L++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLVEVLMLSLLHHPNLVN 138
LG G F V K +S G A K + + + ++ E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
L + +L+ E +SGG L D K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 199 NPPVIYRDLKSSNILLGANLDP----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
+ + DLK NI+L P KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEI 189
Query: 255 ARSGELTVKSDVYSFGVILLELITG 279
L +++D++S GVI L++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 90
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 150
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 151 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SXICSRY-YRAPE 200
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 260
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 261 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 302
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 81 QECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLH-HPNLVNL 139
QE +LGEG RV Q AVK +++ EV ML H N++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
I + + D+ LV+E M GGS+ H+ ++ + + A L++LH+K
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHNKG- 131
Query: 200 PPVIYRDLKSSNILLGA--NLDP-KLSDFGLAKLGPQGEKMN------VTSRVM---GTY 247
+ +RDLK NIL + P K+ DFGL G K+N T ++ G+
Sbjct: 132 --IAHRDLKPENILCEHPNQVSPVKICDFGLGS----GIKLNGDCSPISTPELLTPCGSA 185
Query: 248 GYCAPEY--ARSGELTV---KSDVYSFGVILLELITG 279
Y APE A S E ++ + D++S GVIL L++G
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 144
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 145 --SADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMT---------GYVATRWYR 191
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 94
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 154
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 155 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SXICSRY-YRAPE 204
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 264
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 265 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 306
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 94
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 154
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 155 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SXICSRY-YRAPE 204
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 264
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 265 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 306
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLVEVLMLSLLHHPNLVN 138
LG G F V K +S G A K + + + ++ E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
L + +L+ E +SGG L D K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 199 NPPVIYRDLKSSNILLGANLDP----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
+ + DLK NI+L P KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEI 189
Query: 255 ARSGELTVKSDVYSFGVILLELITG 279
L +++D++S GVI L++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 101
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 161
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 162 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SXICSRY-YRAPE 211
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 271
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 272 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 313
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 148
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 149 --SADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMT---------GYVATRWYR 195
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 95
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 155
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 156 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SYICSRY-YRAPE 205
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 265
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 266 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 307
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 87
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 147
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 148 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SYICSRY-YRAPE 197
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 257
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 258 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 299
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 161
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 221
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 222 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SYICSRY-YRAPE 271
Query: 254 YARSG-ELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 331
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 332 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 373
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 143 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SXICSRY-YRAPE 192
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 253 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 40/217 (18%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE-----FLVEVLMLSLLHHPNLVNL 139
+G+G FG V+K + GQ VA+K++ M+ KE L E+ +L LL H N+VNL
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 140 IGYC---ADGDQR-----LLVYEFMS---GGSVDDHLLD--VNETKKPLDWTTRMKIASG 186
I C A R LV++F G + + L+ ++E K+ +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR---------VMQM 133
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK---LGPQGEKMNVTSRV 243
GL Y+H +++RD+K++N+L+ + KL+DFGLA+ L + +RV
Sbjct: 134 LLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 244 MGTYGYCAPEYARSGELTVKS--DVYSFGVILLELIT 278
+ T Y PE GE D++ G I+ E+ T
Sbjct: 191 V-TLWYRPPELL-LGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 124 EVLMLSLLHHPNLVNLIGYCADG--DQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRM 181
E+ +L L HPN+V L+ D D +V+E ++ G V ++V T KPL
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----MEV-PTLKPLSEDQAR 140
Query: 182 KIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTS 241
+G+EYLH + +I+RD+K SN+L+G + K++DFG++ + + S
Sbjct: 141 FYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL--LS 195
Query: 242 RVMGTYGYCAPEYARSGELTVKS---DVYSFGVILLELITGRRVIDTTRPVDEQNLIAWA 298
+GT + APE DV++ GV L + G+ P ++ ++
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ------CPFMDERIMCLH 249
Query: 299 QPIFRDPKRFPDMAD 313
I FPD D
Sbjct: 250 SKIKSQALEFPDQPD 264
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 59 TKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN 118
T+N+ Q+ F + + +G G + + ++ AVK +D++ +
Sbjct: 15 TENLYFQSMVFSDGYVVKET------IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS 68
Query: 119 KEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWT 178
+E +E+L L HPN++ L DG LV E M GG + D +L +K
Sbjct: 69 EE--IEIL-LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSER 121
Query: 179 TRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNIL-LGANLDP---KLSDFGLAKLGPQG 234
+ + +EYLH + V++RDLK SNIL + + +P ++ DFG AK
Sbjct: 122 EASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
Query: 235 EKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ +T T + APE + D++S G++L ++ G
Sbjct: 179 NGLLMTP--CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE---FLVEVL 126
R+L +++ ++G G FG V +S +V A+K L + M + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 127 MLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHL--LDVNETKKPLDWTTRMKIA 184
+++ + P +V L D +V E+M GG + + + DV E K +T + +A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLA 185
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRV 243
A + ++H RD+K N+LL + KL+DFG K+ +G M
Sbjct: 186 LDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTA 234
Query: 244 MGTYGYCAPEYARS----GELTVKSDVYSFGVILLELITG 279
+GT Y +PE +S G + D +S GV L E++ G
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 143 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SXICSRY-YRAPE 192
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 253 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 29/241 (12%)
Query: 62 INAQTFTFRELAAATKNFRQECLLGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGM 115
I TFT K ++ +G G G V Y L+ N VA+K+L R N
Sbjct: 15 IGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQT 65
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETK--- 172
+ + E++++ +++H N++ L+ + EF V + L+D N ++
Sbjct: 66 HAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVME-LMDANLSQVIQ 120
Query: 173 KPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGP 232
LD + G+++LH +I+RDLK SNI++ ++ K+ DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 233 QGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQ 292
G +T V+ Y Y APE D++S GVI+ E+I G + T +D+
Sbjct: 177 -GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQW 234
Query: 293 N 293
N
Sbjct: 235 N 235
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK------EFLVEVLMLSLLHHPNLVN 138
LG G F V K +S G A K + + + ++ E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
L + +L+ E +SGG L D K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 199 NPPVIYRDLKSSNILLGANLDP----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
+ + DLK NI+L P KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEI 189
Query: 255 ARSGELTVKSDVYSFGVILLELITG 279
L +++D++S GVI L++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 83
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 143
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 144 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SXICSRY-YRAPE 193
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 253
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 254 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 295
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G G + + ++ AVK +D++ +E +E+L L HPN++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE--IEIL-LRYGQHPNIITLKDVYD 86
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
DG +V E M GG + D +L +K + + +EYLH + V++
Sbjct: 87 DGKYVYVVTELMKGGELLDKIL----RQKFFSEREASAVLFTITKTVEYLHAQG---VVH 139
Query: 205 RDLKSSNILL----GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
RDLK SNIL G ++ DFG AK + +T T + APE
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLERQGY 197
Query: 261 TVKSDVYSFGVILLELITG 279
D++S GV+L ++TG
Sbjct: 198 DAACDIWSLGVLLYTMLTG 216
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 143 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SYICSRY-YRAPE 192
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 253 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ ++ N+E + + L H N+V L +
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 86
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 146
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 147 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SXICSRY-YRAPE 196
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 256
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 257 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 298
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 29/241 (12%)
Query: 62 INAQTFTFRELAAATKNFRQECLLGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGM 115
I TFT K ++ +G G G V Y L+ N VA+K+L R N
Sbjct: 15 IGDSTFT------VLKRYQNLKPIGSGAQGIVVAAYDAILERN---VAIKKLSRPFQNQT 65
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETK--- 172
+ + E++++ +++H N++ L+ + EF V + L+D N ++
Sbjct: 66 HAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVME-LMDANLSQVIQ 120
Query: 173 KPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGP 232
LD + G+++LH +I+RDLK SNI++ ++ K+ DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 233 QGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQ 292
G +T V+ Y Y APE D++S GVI+ E+I G + T +D+
Sbjct: 177 -GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQW 234
Query: 293 N 293
N
Sbjct: 235 N 235
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L + + K E+ +L + H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 154
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 155 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 201
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ D+GLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 21/226 (9%)
Query: 59 TKNINAQTFTFRE-LAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQG 117
T+ + + +RE + AT R LG G FG V++ + G AVK++ +
Sbjct: 78 TEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA 133
Query: 118 NKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDW 177
E++ + L P +V L G +G + E + GGS+ L + P D
Sbjct: 134 E-----ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ--LVKEQGCLPED- 185
Query: 178 TTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGAN-LDPKLSDFGLAK-LGPQG- 234
+ A +GLEYLH + +++ D+K+ N+LL ++ L DFG A L P G
Sbjct: 186 -RALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 241
Query: 235 -EKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
+ + + GT + APE K DV+S ++L ++ G
Sbjct: 242 GKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHH 133
K ++Q +G G G V G VAVK+L R N + + E+++L ++H
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNH 80
Query: 134 PNLVNLIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGA 187
N+++L+ + LV E M D +L V + LD +
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIHME--LDHERMSYLLYQM 133
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY 247
G+++LH +I+RDLK SNI++ ++ K+ DFGLA+ M T V+ Y
Sbjct: 134 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMM--TPYVVTRY 188
Query: 248 GYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQN 293
Y APE D++S G I+ EL+ G + T +D+ N
Sbjct: 189 -YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWN 233
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHH 133
K ++Q +G G G V G VAVK+L R N + + E+++L ++H
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNH 82
Query: 134 PNLVNLIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGA 187
N+++L+ + LV E M D +L V + LD +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIHME--LDHERMSYLLYQM 135
Query: 188 AQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY 247
G+++LH +I+RDLK SNI++ ++ K+ DFGLA+ M T V+ Y
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMM--TPYVVTRY 190
Query: 248 GYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQN 293
Y APE D++S G I+ EL+ G + T +D+ N
Sbjct: 191 -YRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWN 235
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 23/220 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ V +R Y APE
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----WYRAPEIML 195
Query: 257 SG-ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ D++S G I+ EL+TGR + T +D+ LI
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 59 TKNINAQTFTFRE-LAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQG 117
T+ + + +RE + AT R LG G FG V++ + G AVK++ +
Sbjct: 59 TEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA 114
Query: 118 NKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDW 177
E++ + L P +V L G +G + E + GGS+ L + P D
Sbjct: 115 E-----ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ--LVKEQGCLPED- 166
Query: 178 TTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGAN-LDPKLSDFGLAK-LGPQGE 235
+ A +GLEYLH + +++ D+K+ N+LL ++ L DFG A L P G
Sbjct: 167 -RALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 222
Query: 236 KMNVTS--RVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
++ + + GT + APE K DV+S ++L ++ G
Sbjct: 223 GKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G G + + ++ AVK +D++ ++E +E+L L HPN++ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEE--IEIL-LRYGQHPNIITLKDVYD 91
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
DG LV E M GG + D +L +K + + +EYLH + V++
Sbjct: 92 DGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVEYLHSQG---VVH 144
Query: 205 RDLKSSNIL-LGANLDP---KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
RDLK SNIL + + +P ++ DFG AK + +T T + APE +
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLKRQGY 202
Query: 261 TVKSDVYSFGVILLELITG 279
D++S G++L ++ G
Sbjct: 203 DEGCDIWSLGILLYTMLAG 221
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ +++K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKSQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGL + ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 104 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 156
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 212
Query: 254 YARSGELTVKS-DVYSFGVILLEL------------ITGRRVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L ++ I G +V R E Q+LI W
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 272
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 273 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 306
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 38/283 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ + N+E + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 143 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SYICSRY-YRAPE 192
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDE------------QNLIAWAQP 300
+ + T DV+S G +L EL+ G+ + VD+ + I P
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 301 IFRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
+ + K FP + K F + EA+A+ + L+ AR
Sbjct: 253 NYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 40/217 (18%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE-----FLVEVLMLSLLHHPNLVNL 139
+G+G FG V+K + GQ VA+K++ M+ KE L E+ +L LL H N+VNL
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVVNL 81
Query: 140 IGYC---ADGDQR-----LLVYEFMS---GGSVDDHLLD--VNETKKPLDWTTRMKIASG 186
I C A R LV++F G + + L+ ++E K+ +
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR---------VMQM 132
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK---LGPQGEKMNVTSRV 243
GL Y+H +++RD+K++N+L+ + KL+DFGLA+ L + +RV
Sbjct: 133 LLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 244 MGTYGYCAPEYARSGELTVKS--DVYSFGVILLELIT 278
+ T Y PE GE D++ G I+ E+ T
Sbjct: 190 V-TLWYRPPELL-LGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 43/231 (18%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLV 137
+F + +LG+G FG+V K + + A+K++ R+ + L EV +L+ L+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 138 NLIGYCADGDQRLLV---------------YEFMSGGSVDD--HLLDVNETKKPLDWTTR 180
Y A ++R V E+ ++ D H ++N+ + W
Sbjct: 66 RY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY-WRLF 122
Query: 181 MKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA----------KL 230
+I + L Y+H + +I+R+LK NI + + + K+ DFGLA KL
Sbjct: 123 RQIL----EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 231 GPQ---GEKMNVTSRVMGTYGYCAPEYAR-SGELTVKSDVYSFGVILLELI 277
Q G N+TS +GT Y A E +G K D YS G+I E I
Sbjct: 176 DSQNLPGSSDNLTS-AIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DF LA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 104 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 156
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 212
Query: 254 YARSGELTVKS-DVYSFGVILLEL------------ITGRRVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L ++ I G +V R E Q+LI W
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 272
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 273 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 306
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 40/217 (18%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE-----FLVEVLMLSLLHHPNLVNL 139
+G+G FG V+K + GQ VA+K++ M+ KE L E+ +L LL H N+VNL
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 140 IGYC---ADGDQR-----LLVYEFMS---GGSVDDHLLD--VNETKKPLDWTTRMKIASG 186
I C A R LV++F G + + L+ ++E K+ +
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR---------VMQM 133
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK---LGPQGEKMNVTSRV 243
GL Y+H +++RD+K++N+L+ + KL+DFGLA+ L + +RV
Sbjct: 134 LLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 244 MGTYGYCAPEYARSGELTVKS--DVYSFGVILLELIT 278
+ T Y PE GE D++ G I+ E+ T
Sbjct: 191 V-TLWYRPPELL-LGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 103 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 155
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 211
Query: 254 YARSGELTVKS-DVYSFGVILLEL------------ITGRRVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L ++ I G +V R E Q+LI W
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 271
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 272 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 305
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 103 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 155
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 211
Query: 254 YARSGELTVKS-DVYSFGVILLEL------------ITGRRVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L ++ I G +V R E Q+LI W
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 271
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 272 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 305
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 90 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 142
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 198
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 258
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 259 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 292
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 103 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 155
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 211
Query: 254 YARSGELTVKS-DVYSFGVILLEL------------ITGRRVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L ++ I G +V R E Q+LI W
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCL 271
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 272 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 305
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 71 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 123
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 179
Query: 254 YARSGELTVKS-DVYSFGVILLEL------------ITGRRVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L ++ I G +V R E Q+LI W
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 239
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 240 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 273
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 104 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 156
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 212
Query: 254 YARSGELTVKS-DVYSFGVILLEL------------ITGRRVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L ++ I G +V R E Q+LI W
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCL 272
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 273 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 306
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 104 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 156
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 212
Query: 254 YARSGELTVKS-DVYSFGVILLEL------------ITGRRVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L ++ I G +V R E Q+LI W
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCL 272
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 273 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 306
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 118 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 170
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 226
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 286
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 287 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 320
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 91 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 143
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 199
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 259
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 260 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 293
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNK-EFLVEVLMLSLLHHPNLVNLIGYC 143
LGEG + VYKG + +VA+K++ +G + EV +L L H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 144 ADGDQRLLVYEFMSGG---SVDD--HLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
LV+E++ +DD ++++++ K L R GL Y H +
Sbjct: 70 HTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLR---------GLAYCHRQK 120
Query: 199 NPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR-S 257
V++RDLK N+L+ + KL+DFGLA+ K V T Y P+ S
Sbjct: 121 ---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGS 175
Query: 258 GELTVKSDVYSFGVILLELITGR 280
+ + + D++ G I E+ TGR
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 40/217 (18%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE-----FLVEVLMLSLLHHPNLVNL 139
+G+G FG V+K + GQ VA+K++ M+ KE L E+ +L LL H N+VNL
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 140 IGYC---ADGDQR-----LLVYEFMS---GGSVDDHLLD--VNETKKPLDWTTRMKIASG 186
I C A R LV++F G + + L+ ++E K+ +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR---------VMQM 133
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAK---LGPQGEKMNVTSRV 243
GL Y+H +++RD+K++N+L+ + KL+DFGLA+ L + +RV
Sbjct: 134 LLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 244 MGTYGYCAPEYARSGELTVKS--DVYSFGVILLELIT 278
+ T Y PE GE D++ G I+ E+ T
Sbjct: 191 V-TLWYRPPELL-LGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 103 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 155
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 211
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 271
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 272 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 305
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 90 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 142
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 198
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 258
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 259 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 292
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 74 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 126
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 182
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 242
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 243 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 276
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 75 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 127
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 183
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 243
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 244 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 277
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQG--NKEFLVEVLMLSLLHHPNLVNLIGY 142
+G+G F V + G A K ++ + +++ E + LL H N+V L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
++ LV++ ++GG + + ++ ++ + + Q LE + V
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV-------AREYYSEADASHCIQQILEAVLHCHQMGV 124
Query: 203 IYRDLKSSNILLGANLD---PKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++RDLK N+LL + KL+DFGLA + QG++ GT GY +PE R
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFG-FAGTPGYLSPEVLRKEA 182
Query: 260 LTVKSDVYSFGVILLELITG 279
D+++ GVIL L+ G
Sbjct: 183 YGKPVDIWACGVILYILLVG 202
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 110 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 162
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 163 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 218
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 278
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 279 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 312
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 76 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 128
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 184
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 244
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 245 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 278
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 91 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 143
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 199
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 259
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 260 ALRPXDRPTFEEIQNHPWMQDVLLPQETAEIHLH 293
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 91 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 143
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 199
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 259
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 260 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 293
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ + N+E + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + + V + K+ L + L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 143 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SYICSRY-YRAPE 192
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKR----- 307
+ + T DV+S G +L EL+ G+ + VD+ I + P R
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII---KVLGTPTREQIRE 249
Query: 308 ---------FPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
FP + K F + EA+A+ + L+ AR
Sbjct: 250 MNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 76 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 128
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 184
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 244
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 245 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 278
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 71 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 123
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 179
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 239
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 240 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 273
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 76 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 128
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 184
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 244
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 245 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 278
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVL-----MLSLLHHPNLVN 138
++G+G F V + + GQ AVK +D + E L + +L HP++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 139 LI-GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
L+ Y +DG +V+EFM G + ++ + + L Y HD
Sbjct: 91 LLETYSSDG-MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 198 ANPPVIYRDLKSSNILLGA--NLDP-KLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAPE 253
+I+RD+K +LL + N P KL FG+A +LG G + RV GT + APE
Sbjct: 150 N---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG--LVAGGRV-GTPHFMAPE 203
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
+ DV+ GVIL L++G
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVL-----MLSLLHHPNLVN 138
++G+G F V + + GQ AVK +D + E L + +L HP++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 139 LI-GYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
L+ Y +DG +V+EFM G + ++ + + L Y HD
Sbjct: 93 LLETYSSDG-MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 151
Query: 198 ANPPVIYRDLKSSNILLGA--NLDP-KLSDFGLA-KLGPQGEKMNVTSRVMGTYGYCAPE 253
+I+RD+K +LL + N P KL FG+A +LG G + RV GT + APE
Sbjct: 152 N---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG--LVAGGRV-GTPHFMAPE 205
Query: 254 YARSGELTVKSDVYSFGVILLELITG 279
+ DV+ GVIL L++G
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L+ N VA+K+L R N + + E++++ ++H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 87
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + +V E M D +L V + + LD + G++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRY-YRAP 194
Query: 253 EYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQN 293
E D++S G I+ E+I G + T +D+ N
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 118 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 170
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 226
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 286
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 287 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 320
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 123 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 175
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 176 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 231
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 291
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 292 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 325
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 29/241 (12%)
Query: 62 INAQTFTFRELAAATKNFRQECLLGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGM 115
I TFT K ++ +G G G V Y L+ N VA+K+L R N
Sbjct: 15 IGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQT 65
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETK--- 172
+ + E++++ +++H N++ L+ + EF V + L+D N ++
Sbjct: 66 HAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVME-LMDANLSQVIQ 120
Query: 173 KPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGP 232
LD + G+++LH +I+RDLK SNI++ ++ K+ DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 233 QGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQ 292
G +T V+ Y Y APE D++S G I+ E+I G + T +D+
Sbjct: 177 -GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 234
Query: 293 N 293
N
Sbjct: 235 N 235
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ FGLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 71 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 123
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 179
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 239
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 240 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 273
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 125
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 178
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 179 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 232
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 293 TVRNYVENRPKYAGLTFPKLFPDSLFP 319
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 26/240 (10%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL----- 139
LG GG G V+ + VA+K++ Q K L E+ ++ L H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 140 ---------IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQG 190
+G + + +V E+M + L +V E L+ R+ + +G
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLLEEHARLFMYQ-LLRG 132
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGA-NLDPKLSDFGLAK-LGPQGEKMNVTSRVMGTYG 248
L+Y+H AN V++RDLK +N+ + +L K+ DFGLA+ + P S + T
Sbjct: 133 LKYIH-SAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKW 189
Query: 249 YCAPEYARS-GELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKR 307
Y +P S T D+++ G I E++TG+ + +++ LI + P+ + R
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDR 249
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 81 QECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLH-HPNLVNL 139
QE +LGEG RV Q AVK +++ EV ML H N++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 140 IGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKAN 199
I + + D+ LV+E M GGS+ H+ ++ + + A L++LH+K
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHNKG- 131
Query: 200 PPVIYRDLKSSNILLGA--NLDP-KLSDFGLAKLGPQGEKMN------VTSRVM---GTY 247
+ +RDLK NIL + P K+ DF L G K+N T ++ G+
Sbjct: 132 --IAHRDLKPENILCEHPNQVSPVKICDFDLGS----GIKLNGDCSPISTPELLTPCGSA 185
Query: 248 GYCAPEY--ARSGELTV---KSDVYSFGVILLELITG 279
Y APE A S E ++ + D++S GVIL L++G
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEF------LVEVLMLSLLH--HPN 135
LLG GGFG VY G S+ VA+K ++++ + E +EV++L +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA-SGAAQGLEYL 194
++ L+ + D +L+ E V D L D + L + ++A S Q LE +
Sbjct: 98 VIRLLDWFERPDSFVLILE--RPEPVQD-LFDFITERGAL----QEELARSFFWQVLEAV 150
Query: 195 HDKANPPVIYRDLKSSNILLGANL-DPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
N V++RD+K NIL+ N + KL DFG L K V + GT Y PE
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPE 206
Query: 254 YARSGELTVKS-DVYSFGVILLELITGR------------RVIDTTRPVDE-QNLIAWA- 298
+ R +S V+S G++L +++ G +V R E Q+LI W
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 266
Query: 299 ------QPIFRDPKRFPDMADPLLRKQFPEKGLN 326
+P F + + P M D LL ++ E L+
Sbjct: 267 ALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 300
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 33/219 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR-NGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
LG GGFG V++ + + A+K++ N ++ + EV L+ L HP +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 144 ADGDQRLLVYEFMSGGSVDDHL---LDVNETKKPLDW------------TTRMKIASGAA 188
+ + E + S +L + + + DW + + I A
Sbjct: 73 LEKN----TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 189 QGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEK-------MNVTS 241
+ +E+LH K +++RDLK SNI + K+ DFGL Q E+ M +
Sbjct: 129 EAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 242 RVMGTYG---YCAPEYARSGELTVKSDVYSFGVILLELI 277
R G G Y +PE + K D++S G+IL EL+
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ D GLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 125
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 178
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 179 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 232
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 293 TVRNYVENRPKYAGLTFPKLFPDSLFP 319
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIIS 87
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQME--LDHERMSYLLYQMLXGIK 140
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 194
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFP 281
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L+ N VA+K+L R N + + E++++ ++H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 87
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + +V E M D +L V + + LD + G++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 194
Query: 253 EYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQN 293
E D++S G I+ E+I G + T +D+ N
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 29/241 (12%)
Query: 62 INAQTFTFRELAAATKNFRQECLLGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGM 115
I TFT K ++ +G G G V Y L+ N VA+K+L R N
Sbjct: 15 IGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQT 65
Query: 116 QGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETK--- 172
+ + E++++ +++H N++ L+ + EF V + L+D N ++
Sbjct: 66 HAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVME-LMDANLSQVIQ 120
Query: 173 KPLDWTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGP 232
LD + G+++LH +I+RDLK SNI++ ++ K+ DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 233 QGEKMNVTSRVMGTYGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQ 292
G +T V+ Y Y APE D++S G I+ E+I G + T +D+
Sbjct: 177 -GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 234
Query: 293 N 293
N
Sbjct: 235 N 235
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 87
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQME--LDHERMSYLLYQMLXGIK 140
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 194
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFP 281
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L+ N VA+K+L R N + + E++++ ++H N++
Sbjct: 33 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 88
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + +V E M D +L V + + LD + G++
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 141
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 142 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 195
Query: 253 EYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQN 293
E D++S G I+ E+I G + T +D+ N
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 236
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 70 RELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE---FLVEVL 126
R L +++ ++G G FG V +++ +V A+K L + M + F E
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 127 MLSLLHHPNLVNLIGYCADGDQRLL--VYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIA 184
+++ + P +V L +CA D + L V E+M GG + + + + + +K + T
Sbjct: 128 IMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYT----- 180
Query: 185 SGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRV 243
+ L+ +H +I+RD+K N+LL + KL+DFG K+ G M
Sbjct: 181 AEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG--MVHCDTA 235
Query: 244 MGTYGYCAPEYARS----GELTVKSDVYSFGVILLELITG 279
+GT Y +PE +S G + D +S GV L E++ G
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNL-IGY 142
++G G FG VY+ L +G++VA+K++ + N+E + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDV----NETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
+ G+++ VY + V + V + K+ L + L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+L LDP KL DFG AK +GE NV S + Y Y APE
Sbjct: 143 ---ICHRDIKPQNLL----LDPDTAVLKLCDFGSAKQLVRGEP-NV-SXICSRY-YRAPE 192
Query: 254 YAR-SGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKR----- 307
+ + T DV+S G +L EL+ G+ + VD+ I + P R
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII---KVLGTPTREQIRE 249
Query: 308 ---------FPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGAR 343
FP + K F + EA+A+ + L+ AR
Sbjct: 250 MNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 80
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQME--LDHERMSYLLYQMLXGIK 133
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 134 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 187
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 248 TVRNYVENRPKYAGLTFPKLFPDSLFP 274
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 28/220 (12%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNG--------MQGNKE-FLVEVLM 127
+N+ + +LG G V + + + AVK +D G +Q +E L EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 128 LSLLH-HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG 186
L + HPN++ L LV++ M G + D+L + K L KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 132
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMG 245
+ + LH K N +++RDLK NILL +++ KL+DFG + +L P GEK+ V G
Sbjct: 133 LLEVICALH-KLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCG 185
Query: 246 TYGYCAPEYARSGE------LTVKSDVYSFGVILLELITG 279
T Y APE + D++S GVI+ L+ G
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L+ N VA+K+L R N + + E++++ ++H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 87
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + +V E M D +L V + + LD + G++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 194
Query: 253 EYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQN 293
E D++S G I+ E+I G + T +D+ N
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ D GLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L+ N VA+K+L R N + + E++++ ++H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 87
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETK---KPLDWTTRMKIASGAAQGLEYLH 195
L+ + EF V + L+D N ++ LD + G+++LH
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVME-LMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
+I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVI 197
Query: 256 RSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQN 293
D++S G I+ E+I G + T +D+ N
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 87
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 194
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFP 281
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 88
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 141
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 142 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 195
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 256 TVRNYVENRPKYAGLTFPKLFPDSLFP 282
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 28/220 (12%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNG--------MQGNKE-FLVEVLM 127
+N+ + +LG G V + + + AVK +D G +Q +E L EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 128 LSLLH-HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG 186
L + HPN++ L LV++ M G + D+L + K L KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 132
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMG 245
+ + LH K N +++RDLK NILL +++ KL+DFG + +L P GEK+ V G
Sbjct: 133 LLEVICALH-KLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---SVCG 185
Query: 246 TYGYCAPEYARSGE------LTVKSDVYSFGVILLELITG 279
T Y APE + D++S GVI+ L+ G
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 87
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 194
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFP 281
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 86
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 87 LLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 139
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 140 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 193
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 194 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 253
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 254 TVRNYVENRPKYAGLTFPKLFPDSLFP 280
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 20/226 (8%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHP 134
K + +G G +G V + +G+ VA+K+L R K E+L+L + H
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 135 NLVNLIGYCADGDQRLLVYEF---MSGGSVD-DHLLDVNETKKPLDWTTRMKIASGAAQG 190
N++ L+ Y+F M D ++ + +++ + + + +G
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKG 138
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
L+Y+H V++RDLK N+ + + + K+ DFGLA+ V +R Y
Sbjct: 139 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYR 190
Query: 251 APEYARSG-ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
APE S D++S G I+ E++TG+ + +D+ I
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 28/220 (12%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNG--------MQGNKE-FLVEVLM 127
+N+ + +LG G V + + + AVK +D G +Q +E L EV +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 128 LSLLH-HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG 186
L + HPN++ L LV++ M G + D+L + K L KI
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 119
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLA-KLGPQGEKMNVTSRVMG 245
+ + LH K N +++RDLK NILL +++ KL+DFG + +L P GEK+ V G
Sbjct: 120 LLEVICALH-KLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCG 172
Query: 246 TYGYCAPEYARSGE------LTVKSDVYSFGVILLELITG 279
T Y APE + D++S GVI+ L+ G
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 88
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 141
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 142 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 195
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 256 TVRNYVENRPKYAGLTFPKLFPDSLFP 282
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L+ N VA+K+L R N + + E++++ ++H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 87
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETK---KPLDWTTRMKIASGAAQGLEYLH 195
L+ + EF V + L+D N ++ LD + G+++LH
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVME-LMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA 255
+I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVI 197
Query: 256 RSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQN 293
D++S G I+ E+I G + T +D+ N
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VAVK+L R + K E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 142
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ D GLA+ ++M GY A + R
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMT---------GYVATRWYR 189
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
+ E+ + D++S G I+ EL+TGR + T +D+ LI
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 20/226 (8%)
Query: 77 KNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHP 134
K + +G G +G V + +G+ VA+K+L R K E+L+L + H
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 135 NLVNLIGYCADGDQRLLVYEF---MSGGSVD-DHLLDVNETKKPLDWTTRMKIASGAAQG 190
N++ L+ Y+F M D ++ + +++ + + + +G
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKG 156
Query: 191 LEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYC 250
L+Y+H V++RDLK N+ + + + K+ DFGLA+ V +R Y
Sbjct: 157 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYR 208
Query: 251 APEYARSG-ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLI 295
APE S D++S G I+ E++TG+ + +D+ I
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 254
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 81
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 134
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 188
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 248
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 249 TVRNYVENRPKYAGLTFPKLFPDSLFP 275
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 80
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 133
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 134 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 187
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 248 TVRNYVENRPKYAGLTFPKLFPDSLFP 274
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 81
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 134
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 188
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 248
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 249 TVRNYVENRPKYAGLTFPKLFPDSLFP 275
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIIS 87
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 194
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFP 281
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 35/222 (15%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V +G +AVK+L R + K E+ +L + H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 143 CA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + LV M L ++ + +K D + I +GL+Y+H
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGAD-----LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH- 171
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR 256
+ +I+RDLK SN+ + + + K+ DFGLA+ ++M GY A + R
Sbjct: 172 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT---------GYVATRWYR 218
Query: 257 SGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDE 291
+ E+ + D++S G I+ EL+TGR + T +++
Sbjct: 219 APEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQ 260
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L N VA+K+L R N + + E++++ ++H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIIS 87
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + LV E M D +L V + + LD + G++
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 194
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ------NLIAWAQP 300
E D++S G I+ E++ GR ID V EQ + QP
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 301 IFRD-------------PKRFPDMADP 314
R+ PK FPD P
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFP 281
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPNLVNLIGY 142
LG+G F V + ++ G A K ++ + ++ E + L HPN+V L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ LV++ ++GG + + ++ E D + ++ + + Y H +
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQ---QILESIAYCHSNG---I 125
Query: 203 IYRDLKSSNILLGANLD---PKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++R+LK N+LL + KL+DFGLA E + GT GY +PE +
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDP 182
Query: 260 LTVKSDVYSFGVILLELITG 279
+ D+++ GVIL L+ G
Sbjct: 183 YSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPNLVNLIGY 142
LG+G F V + ++ G A K ++ + ++ E + L HPN+V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ LV++ ++GG + + ++ E D + ++ + + Y H +
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQ---QILESIAYCHSNG---I 126
Query: 203 IYRDLKSSNILLGANLD---PKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++R+LK N+LL + KL+DFGLA E + GT GY +PE +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDP 183
Query: 260 LTVKSDVYSFGVILLELITG 279
+ D+++ GVIL L+ G
Sbjct: 184 YSKPVDIWACGVILYILLVG 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPNLVNLIGY 142
LG+G F V + ++ G A K ++ + ++ E + L HPN+V L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ LV++ ++GG + + ++ ++ + + Q LE + + +
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIV-------AREFYSEADASHCIQQILESIAYCHSNGI 149
Query: 203 IYRDLKSSNILLGANLD---PKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++R+LK N+LL + KL+DFGLA E + GT GY +PE +
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDP 206
Query: 260 LTVKSDVYSFGVILLELITG 279
+ D+++ GVIL L+ G
Sbjct: 207 YSKPVDIWACGVILYILLVG 226
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--KEFLVEVLMLSLLHHPNLVNLIGY 142
LG+G F V + ++ G A K ++ + ++ E + L HPN+V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
+ LV++ ++GG + + ++ E D + ++ + + Y H +
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQ---QILESIAYCHSNG---I 126
Query: 203 IYRDLKSSNILLGANLD---PKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGE 259
++R+LK N+LL + KL+DFGLA E + GT GY +PE +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDP 183
Query: 260 LTVKSDVYSFGVILLELITG 279
+ D+++ GVIL L+ G
Sbjct: 184 YSKPVDIWACGVILYILLVG 203
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L+ N VA+K+L R N + + E++++ ++H N++
Sbjct: 34 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 89
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + +V E M D +L V + + LD + G++
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 142
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G + V+ Y Y AP
Sbjct: 143 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRY-YRAP 196
Query: 253 EYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQN 293
E D++S G I+ E+I G + T +D+ N
Sbjct: 197 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 237
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G G + + ++ AVK +D++ +E +E+L L HPN++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEE--IEIL-LRYGQHPNIITLKDVYD 86
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
DG +V E GG + D +L +K + + +EYLH + V++
Sbjct: 87 DGKYVYVVTELXKGGELLDKIL----RQKFFSEREASAVLFTITKTVEYLHAQG---VVH 139
Query: 205 RDLKSSNILL----GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
RDLK SNIL G ++ DFG AK + T T + APE
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP--CYTANFVAPEVLERQGY 197
Query: 261 TVKSDVYSFGVILLELITG 279
D++S GV+L +TG
Sbjct: 198 DAACDIWSLGVLLYTXLTG 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYC 143
++G G FG V++ L + +V A+K++ ++ N+E + + ++ HPN+V+L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEV-AIKKVLQDKRFKNRELQI----MRIVKHPNVVDLKAFF 101
Query: 144 -ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIAS----GAAQGLEYLHDKA 198
++GD++ V+ + V + + + L T M + + L Y+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 199 NPPVIYRDLKSSNILLGANLDP-----KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+ +RD+K N+LL DP KL DFG AK+ GE NV S + Y Y APE
Sbjct: 162 ---ICHRDIKPQNLLL----DPPSGVLKLIDFGSAKILIAGEP-NV-SXICSRY-YRAPE 211
Query: 254 YARSG-ELTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
T D++S G ++ EL+ G+ + +D+
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ 250
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 28/218 (12%)
Query: 69 FRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLML 128
F++L TK L E G ++KG Q N VV V ++ + +++F E L
Sbjct: 9 FKQLNFLTK-------LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRL 61
Query: 129 SLLHHPNLVNLIGYCAD--GDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASG 186
+ HPN++ ++G C L+ +M GS+ + L + T +D + +K A
Sbjct: 62 RIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHE--GTNFVVDQSQAVKFALD 119
Query: 187 AAQGLEYLHDKANPPVIYRD-LKSSNILLGANLDPKLS--DFGLAKLGPQGEKMNVTSRV 243
A+G+ +LH P+I R L S ++++ ++ ++S D + P
Sbjct: 120 MARGMAFLHTLE--PLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR--------- 168
Query: 244 MGTYGYCAPE-YARSGELTVK--SDVYSFGVILLELIT 278
M + APE + E T + +D++SF V+L EL+T
Sbjct: 169 MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 34/241 (14%)
Query: 53 GTKQDETKNINAQTFTFRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQL-- 110
GT + +T+ + + + A + +R+ LGEG +G VYK + VA+K++
Sbjct: 10 GTLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRL 69
Query: 111 --DRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDV 168
+ G+ G + EV +L L H N++ L + L++E+
Sbjct: 70 EHEEEGVPGTA--IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE----------- 116
Query: 169 NETKKPLDWT--TRMKIASG----AAQGLEYLHDKANPPVIYRDLKSSNILLG---ANLD 219
N+ KK +D M++ G+ + H + ++RDLK N+LL A+
Sbjct: 117 NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASET 173
Query: 220 P--KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYAR-SGELTVKSDVYSFGVILLEL 276
P K+ DFGLA+ G + + + T Y PE S + D++S I E+
Sbjct: 174 PVLKIGDFGLARAF--GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEM 231
Query: 277 I 277
+
Sbjct: 232 L 232
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 112/289 (38%), Gaps = 46/289 (15%)
Query: 74 AATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEV---LMLSL 130
A +R LLG+GGFG V+ G ++ VA+K + RN + G V L ++L
Sbjct: 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVAL 87
Query: 131 LH-------HPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
L HP ++ L+ + + +LV E L D K PL
Sbjct: 88 LWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQ---DLFDYITEKGPLGEGPSRCF 144
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLD-PKLSDFGLAKLGPQGEKMNVTSR 242
+++ H + V++RD+K NIL+ KL DFG L +
Sbjct: 145 FGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD-- 199
Query: 243 VMGTYGYCAPEY-ARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPI 301
GT Y PE+ +R + + V+S G++L +++ G + + + E L
Sbjct: 200 --GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL------- 250
Query: 302 FRDPKRFPDMADPLLRKQFPEKGLNEAVAIAAMCLQEEAGARPLMSDVV 350
FP + A+ CL + +RP + +++
Sbjct: 251 -----------------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G G FG + + ++VAVK ++R G + ++ E++ L HPN+V
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+V E+ SGG + + + + + ++ SG + Y H V +
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS----YCHAMQ---VCH 137
Query: 205 RDLKSSNILLGANLDP--KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
RDLK N LL + P K+ DFG +K + T +GT Y APE E
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLKKEYDG 194
Query: 263 K-SDVYSFGVILLELITG 279
K +DV+S GV L ++ G
Sbjct: 195 KVADVWSCGVTLYVMLVG 212
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L+ N VA+K+L R N + + E++++ ++H N++
Sbjct: 37 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 92
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + +V E M D +L V + + LD + G++
Sbjct: 93 LLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 145
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 146 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 199
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ 292
E D++S G I+ E++ GR ID V EQ
Sbjct: 200 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 102/265 (38%), Gaps = 74/265 (27%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGN-KEFLVEVLMLSLL-HHPNLV 137
LG G FG+V + + + VAVK L K + E+ +L+ + HH N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 138 NLIG--------------YCADGD-------QRLLVY----------------------- 153
NL+G YC G+ +R L +
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQG 154
Query: 154 ------------EFMSGGSVDDHLL-DVNET-------KKPLDWTTRMKIASGAAQGLEY 193
F S G +D L DV E K+P+ + + A+G+E+
Sbjct: 155 KKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEF 214
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
L + I+RDL + NILL N K+ DFGLA+ + + APE
Sbjct: 215 LSSRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPE 271
Query: 254 YARSGELTVKSDVYSFGVILLELIT 278
+ KSDV+S+GV+L E+ +
Sbjct: 272 SIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L+ N VA+K+L R N + + E++++ ++H N++
Sbjct: 26 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 81
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + +V E M D +L V + + LD + G++
Sbjct: 82 LLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 134
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G +T V+ Y Y AP
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 188
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ 292
E D++S G I+ E++ GR ID V EQ
Sbjct: 189 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G G FG + ++VAVK ++R G + ++ E++ L HPN+V
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+V E+ SGG + + + + + ++ SG + Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS----YAHAMQ---VAH 138
Query: 205 RDLKSSNILLGANLDP--KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
RDLK N LL + P K++DFG +K + +GT Y APE E
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---PKSAVGTPAYIAPEVLLKKEYDG 195
Query: 263 K-SDVYSFGVILLELITG 279
K +DV+S GV L ++ G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L+ N VA+K+L R N + + E++++ ++H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 87
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + +V E M D +L V + + LD + G++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G + V+ Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YRAP 194
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ 292
E D++S G I+ E++ GR ID V EQ
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 39/224 (17%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V Q VAVK+L R + + E+ +L L H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 143 ------CADGDQRLLVYEFMSGGSVDDHLLDVNETKK--PLDWTTRMKIASGAAQGLEYL 194
D + LV M D+N K L + +GL+Y+
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGA--------DLNNIVKCQALSDEHVQFLVYQLLRGLKYI 139
Query: 195 HDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
H +I+RDLK SN+ + + + ++ DFGLA+ E+M GY A +
Sbjct: 140 HSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQA--DEEMT---------GYVATRW 185
Query: 255 ARSGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDE 291
R+ E+ + D++S G I+ EL+ G+ + + +D+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQ 229
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 16/229 (6%)
Query: 82 ECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIG 141
E +G G +G V + A K++ + ++ F E+ ++ L HPN++ L
Sbjct: 31 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D LV E +GG + + ++ K+ + +I + Y H K N
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCH-KLN-- 143
Query: 202 VIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
V +RDLK N L + KL DFGLA G+ M +GT Y +P+ G
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ-VLEG 199
Query: 259 ELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIAWAQPIFRDPKR 307
+ D +S GV++ L+ G P D + ++ + F P++
Sbjct: 200 LYGPECDEWSAGVMMYVLLCGYPPFSA--PTDXEVMLKIREGTFTFPEK 246
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 82 ECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIG 141
E +G G +G V + A K++ + ++ F E+ ++ L HPN++ L
Sbjct: 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D LV E +GG + + ++ K+ + +I + Y H K N
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCH-KLN-- 126
Query: 202 VIYRDLKSSNILL---GANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSG 258
V +RDLK N L + KL DFGLA G+ M +GT Y +P+ G
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ-VLEG 182
Query: 259 ELTVKSDVYSFGVILLELITG 279
+ D +S GV++ L+ G
Sbjct: 183 LYGPECDEWSAGVMMYVLLCG 203
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR------NGMQGNKEFLVE--VLMLSLLHHPNL 136
LG G G V + + VA+K + + + + + VE + +L L+HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + + D + +V E M GG + D ++ K+ + T ++ ++YLH+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQ-MLLAVQYLHE 132
Query: 197 KANPPVIYRDLKSSNILLGANLDP---KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+I+RDLK N+LL + + K++DFG +K+ + M + GT Y APE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTYLAPE 186
Query: 254 YARS---GELTVKSDVYSFGVILLELITG 279
S D +S GVIL ++G
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 31/222 (13%)
Query: 84 LLGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIG 141
L+G G +G V + + +VVA+K++ R + K L E+ +L+ L+H ++V ++
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 142 YCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPP 201
D ++ D + T L + G++Y+H
Sbjct: 120 IVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG--- 176
Query: 202 VIYRDLKSSNILLGANLDPKLSDFGLAK-------------LGPQGEKMNVTS------- 241
+++RDLK +N L+ + K+ DFGLA+ + P+ + MN+ +
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNL 236
Query: 242 --RVMG---TYGYCAPEYARSGE-LTVKSDVYSFGVILLELI 277
++ G T Y APE E T DV+S G I EL+
Sbjct: 237 KRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G G FG + + ++VAVK ++R G + E++ L HPN+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+V E+ SGG + + + + + ++ SG + Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS----YCHAMQ---VCH 138
Query: 205 RDLKSSNILLGANLDP--KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
RDLK N LL + P K+ DFG +K + T +GT Y APE E
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLKKEYDG 195
Query: 263 K-SDVYSFGVILLELITG 279
K +DV+S GV L ++ G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 85 LGEGGFG--RVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G FG R+ + L ++VAVK ++R G ++ E++ L HPN+V
Sbjct: 28 IGSGNFGVARLMRDKL--TKELVAVKYIER-GAAIDENVQREIINHRSLRHPNIVRFKEV 84
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPV 202
++ E+ SGG + + + + + ++ SG + Y H +
Sbjct: 85 ILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVS----YCHSMQ---I 137
Query: 203 IYRDLKSSNILLGANLDP--KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGEL 260
+RDLK N LL + P K+ DFG +K + T +GT Y APE E
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLRQEY 194
Query: 261 TVK-SDVYSFGVILLELITG 279
K +DV+S GV L ++ G
Sbjct: 195 DGKIADVWSCGVTLYVMLVG 214
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR------NGMQGNKEFLVE--VLMLSLLHHPNL 136
LG G G V + + VA+K + + + + + VE + +L L+HP +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + + D + +V E M GG + D ++ K+ T ++ ++YLH+
Sbjct: 77 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA---TCKLYFYQ-MLLAVQYLHE 131
Query: 197 KANPPVIYRDLKSSNILLGANLDP---KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+I+RDLK N+LL + + K++DFG +K+ + M + GT Y APE
Sbjct: 132 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTYLAPE 185
Query: 254 YARS---GELTVKSDVYSFGVILLELITG 279
S D +S GVIL ++G
Sbjct: 186 VLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR------NGMQGNKEFLVE--VLMLSLLHHPNL 136
LG G G V + + VA+K + + + + + VE + +L L+HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + + D + +V E M GG + D ++ K+ T ++ ++YLH+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA---TCKLYFYQ-MLLAVQYLHE 132
Query: 197 KANPPVIYRDLKSSNILLGANLDP---KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+I+RDLK N+LL + + K++DFG +K+ + M + GT Y APE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTYLAPE 186
Query: 254 YARS---GELTVKSDVYSFGVILLELITG 279
S D +S GVIL ++G
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR------NGMQGNKEFLVE--VLMLSLLHHPNL 136
LG G G V + + VA+K + + + + + VE + +L L+HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + + D + +V E M GG + D ++ K+ T ++ ++YLH+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA---TCKLYFYQ-MLLAVQYLHE 132
Query: 197 KANPPVIYRDLKSSNILLGANLDP---KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+I+RDLK N+LL + + K++DFG +K+ + M + GT Y APE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTYLAPE 186
Query: 254 YARS---GELTVKSDVYSFGVILLELITG 279
S D +S GVIL ++G
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
E+ +L L+HP ++ + + D + +V E M GG + D ++ K+ T ++
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA---TCKLYF 245
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDP---KLSDFGLAKLGPQGEKMNVT 240
++YLH+ +I+RDLK N+LL + + K++DFG +K+ + M
Sbjct: 246 YQ-MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT- 300
Query: 241 SRVMGTYGYCAPEYARS---GELTVKSDVYSFGVILLELITG 279
+ GT Y APE S D +S GVIL ++G
Sbjct: 301 --LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR------NGMQGNKEFLVE--VLMLSLLHHPNL 136
LG G G V + + VA+K + + + + + VE + +L L+HP +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ + + D + +V E M GG + D ++ K+ T ++ ++YLH+
Sbjct: 84 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA---TCKLYFYQ-MLLAVQYLHE 138
Query: 197 KANPPVIYRDLKSSNILLGANLDP---KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPE 253
+I+RDLK N+LL + + K++DFG +K+ + M + GT Y APE
Sbjct: 139 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTYLAPE 192
Query: 254 YARS---GELTVKSDVYSFGVILLELITG 279
S D +S GVIL ++G
Sbjct: 193 VLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 124 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKI 183
E+ +L L+HP ++ + + D + +V E M GG + D ++ K+ T ++
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA---TCKLYF 259
Query: 184 ASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDP---KLSDFGLAKLGPQGEKMNVT 240
++YLH+ +I+RDLK N+LL + + K++DFG +K+ + M
Sbjct: 260 YQ-MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT- 314
Query: 241 SRVMGTYGYCAPEYARS---GELTVKSDVYSFGVILLELITG 279
+ GT Y APE S D +S GVIL ++G
Sbjct: 315 --LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 28/224 (12%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPN 135
N+ + L+G G +G VY ++ + VA+K+++R + K L E+ +L+ L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 136 LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH 195
++ L D ++ D L + +T L I G ++H
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKL-------------------GPQGE- 235
+ +I+RDLK +N LL + K+ DFGLA+ GP +
Sbjct: 147 ESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 236 -KMNVTSRVMGTYGYCAPEYARSGELTVKS-DVYSFGVILLELI 277
K +TS V+ T Y APE E KS D++S G I EL+
Sbjct: 204 LKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 85 LGEGGFGRV---YKGTLQSNGQVVAVKQLDR---NGMQGNKEFLVEVLMLSLLHHPNLVN 138
+G G G V Y L+ N VA+K+L R N + + E++++ ++H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 87
Query: 139 LIGYCA------DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLE 192
L+ + +V E M D +L V + + LD + G++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 193 YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAP 252
+LH +I+RDLK SNI++ ++ K+ DFGLA+ G + V+ Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YRAP 194
Query: 253 EYARSGELTVKSDVYSFGVILLELIT------GRRVIDTTRPVDEQ 292
E D++S G I+ E++ GR ID V EQ
Sbjct: 195 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLM-LSLLHHPNLVNLIGYC 143
LG G FG V++ + G AVK++ + F VE L+ + L P +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRL------EVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 144 ADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVI 203
+G + E + GGS+ + + P D + A +GLEYLH + ++
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCL--PED--RALYYLGQALEGLEYLHTRR---IL 186
Query: 204 YRDLKSSNILLGANLD-PKLSDFGLAK-LGPQG--EKMNVTSRVMGTYGYCAPEYARSGE 259
+ D+K+ N+LL ++ L DFG A L P G + + + GT + APE
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 260 LTVKSDVYSFGVILLELITG 279
K D++S ++L ++ G
Sbjct: 247 CDAKVDIWSSCCMMLHMLNG 266
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 83 CLLGEGGFGRVY--KGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLI 140
C +G G +G VY K + + A+KQ++ G+ + E+ +L L HPN+++L
Sbjct: 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA--CREIALLRELKHPNVISLQ 84
Query: 141 G-YCADGDQRL-LVYEFMSGGSVDDHLLDVNET----KKPLDWTTRM--KIASGAAQGLE 192
+ + D+++ L++++ H++ + KKP+ M + G+
Sbjct: 85 KVFLSHADRKVWLLFDYAEHDLW--HIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 193 YLHDKANPPVIYRDLKSSNIL-LGANLD---PKLSDFGLAKLGPQGEK-MNVTSRVMGTY 247
YLH AN V++RDLK +NIL +G + K++D G A+L K + V+ T+
Sbjct: 143 YLH--AN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF 199
Query: 248 GYCAPEYARSGELTVKS-DVYSFGVILLELITGRRVI 283
Y APE K+ D+++ G I EL+T +
Sbjct: 200 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 39/224 (17%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V Q VAVK+L R + + E+ +L L H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 143 ------CADGDQRLLVYEFMSGGSVDDHLLDVNETKK--PLDWTTRMKIASGAAQGLEYL 194
D + LV M D+N K L + +GL+Y+
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGA--------DLNNIVKCQALSDEHVQFLVYQLLRGLKYI 147
Query: 195 HDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
H +I+RDLK SN+ + + + ++ DFGLA+ E+M GY A +
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQA--DEEMT---------GYVATRW 193
Query: 255 ARSGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDE 291
R+ E+ + D++S G I+ EL+ G+ + + +D+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQ 237
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 39/224 (17%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V Q VAVK+L R + + E+ +L L H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 143 ------CADGDQRLLVYEFMSGGSVDDHLLDVNETKK--PLDWTTRMKIASGAAQGLEYL 194
D + LV M D+N K L + +GL+Y+
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGA--------DLNNIVKSQALSDEHVQFLVYQLLRGLKYI 147
Query: 195 HDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
H +I+RDLK SN+ + + + ++ DFGLA+ E+M GY A +
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQA--DEEMT---------GYVATRW 193
Query: 255 ARSGELTV-------KSDVYSFGVILLELITGRRVIDTTRPVDE 291
R+ E+ + D++S G I+ EL+ G+ + + +D+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQ 237
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 48/211 (22%)
Query: 85 LGEGGFGRVYKGTLQS-NGQVVAVKQLDRNG-------MQGNKEFLVEVLMLSLLHHPNL 136
+ GG G +Y ++ NG+ V +K L +G ++FL EV+ HP++
Sbjct: 88 IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV------HPSI 141
Query: 137 VNLIGYCADGDQR-----LLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGL 191
V + + D+ +V E++ G S L ++ +K + +A A L
Sbjct: 142 VQIFNFVEHTDRHGDPVGYIVMEYVGGQS-----LKRSKGQK-------LPVAEAIAYLL 189
Query: 192 E------YLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMG 245
E YLH ++Y DLK NI+L KL D G ++N + G
Sbjct: 190 EILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVS------RINSFGYLYG 239
Query: 246 TYGYCAPEYARSGELTVKSDVYSFGVILLEL 276
T G+ APE R+G TV +D+Y+ G L L
Sbjct: 240 TPGFQAPEIVRTGP-TVATDIYTVGRTLAAL 269
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 26/214 (12%)
Query: 79 FRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLH-HPNLV 137
FR +G G FG +Y GT + VA+K N + + L E + +L +
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--ENVKTKHPQLLYESKIYRILQGGTGIP 66
Query: 138 NLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDK 197
N+ + +GD +LV + + G S++D N + L T + +A +E++H K
Sbjct: 67 NVRWFGVEGDYNVLVMDLL-GPSLEDLF---NFCSRKLSLKTVLMLADQMINRVEFVHSK 122
Query: 198 ANPPVIYRDLKSSNILLGANLDPK---LSDFGLAKLG---------PQGEKMNVTSRVMG 245
+ ++RD+K N L+G + DFGLAK P E N+T G
Sbjct: 123 S---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLT----G 175
Query: 246 TYGYCAPEYARSGELTVKSDVYSFGVILLELITG 279
T Y + E + + D+ S G +L+ + G
Sbjct: 176 TARYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 181 MKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVT 240
+ I A+ +E+LH K +++RDLK SNI + K+ DFGL Q E+
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 241 SRVMGTYG----------YCAPEYARSGELTVKSDVYSFGVILLELI 277
M Y Y +PE + K D++S G+IL EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G G FG + + ++VAVK ++R G + ++ E++ L HPN+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+V E+ SGG + + + + + ++ SG + Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS----YCHAMQ---VCH 138
Query: 205 RDLKSSNILLGANLDP--KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
RDLK N LL + P K+ FG +K + T +GT Y APE E
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VGTPAYIAPEVLLKKEYDG 195
Query: 263 K-SDVYSFGVILLELITG 279
K +DV+S GV L ++ G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 79 FRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFL----VEVLMLSLLHHP 134
+ + L+G+G FG+V K + + VA+K + + K FL +EV +L L++
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-----KNKKAFLNQAQIEVRLLELMNKH 91
Query: 135 N------LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAA 188
+ +V+L + + LV+E +S ++ D L + N L+ T K A
Sbjct: 92 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTR--KFAQQMC 148
Query: 189 QGLEYLHDKANP--PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
L +L A P +I+ DLK NILL +PK S + G + + + +
Sbjct: 149 TALLFL---ATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQS 202
Query: 247 YGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIA 296
Y +PE + D++S G IL+E+ TG + VD+ N I
Sbjct: 203 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 95/237 (40%), Gaps = 61/237 (25%)
Query: 79 FRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVN 138
F+ E + G+G FG V G +S G VA+K++ ++ N+E + + L++LHHPN+V
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQ 83
Query: 139 LIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKA 198
L Y F + G D + +N + + T + Y A
Sbjct: 84 LQSY------------FYTLGERDRRDIYLNVVMEYVPDTLHRCCRN------YYRRQVA 125
Query: 199 NPPVI-----------------------YRDLKSSNILLG-ANLDPKLSDFGLA-KLGPQ 233
PP++ +RD+K N+L+ A+ KL DFG A KL P
Sbjct: 126 PPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPS 185
Query: 234 GEKMNVTSRVMGTYGYCAPEYARSGEL-------TVKSDVYSFGVILLELITGRRVI 283
+ Y Y R+ EL T D++S G I E++ G +
Sbjct: 186 EPNV----------AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 79 FRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFL----VEVLMLSLLHHP 134
+ + L+G+G FG+V K + + VA+K + + K FL +EV +L L++
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-----KNKKAFLNQAQIEVRLLELMNKH 110
Query: 135 N------LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAA 188
+ +V+L + + LV+E +S ++ D L + N L+ T K A
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTR--KFAQQMC 167
Query: 189 QGLEYLHDKANP--PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
L +L A P +I+ DLK NILL +PK S + G + + + +
Sbjct: 168 TALLFL---ATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQS 221
Query: 247 YGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIA 296
Y +PE + D++S G IL+E+ TG + VD+ N I
Sbjct: 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G G FG V++ + G AVK++ + + E++ + L P +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 120
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+G + E + GGS+ + + P D + A +GLEYLH + +++
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQMGCL--PED--RALYYLGQALEGLEYLHTRR---ILH 173
Query: 205 RDLKSSNILLGANLD-PKLSDFGLAK-LGPQG--EKMNVTSRVMGTYGYCAPEYARSGEL 260
D+K+ N+LL ++ L DFG A L P G + + + GT + APE
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 233
Query: 261 TVKSDVYSFGVILLELITG 279
K D++S ++L ++ G
Sbjct: 234 DAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G G FG V++ + G AVK++ + + E++ + L P +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 136
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+G + E + GGS+ + + P D + A +GLEYLH + +++
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQMGCL--PED--RALYYLGQALEGLEYLHTRR---ILH 189
Query: 205 RDLKSSNILLGANLD-PKLSDFGLAK-LGPQG--EKMNVTSRVMGTYGYCAPEYARSGEL 260
D+K+ N+LL ++ L DFG A L P G + + + GT + APE
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 249
Query: 261 TVKSDVYSFGVILLELITG 279
K D++S ++L ++ G
Sbjct: 250 DAKVDIWSSCCMMLHMLNG 268
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 117/273 (42%), Gaps = 43/273 (15%)
Query: 64 AQTFT--FRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM------ 115
A+ FT +E+ ++F ++G G FG V +++ ++ A+K L++ M
Sbjct: 75 AKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET 134
Query: 116 ---QGNKEFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE 170
+ ++ LV + ++ LH+ D + LV ++ GG + LL E
Sbjct: 135 ACFREERDVLVNGDCQWITALHYA--------FQDENHLYLVMDYYVGGDLLT-LLSKFE 185
Query: 171 TKKPLD----WTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFG 226
K P D + M +A + L Y+H RD+K N+LL N +L+DFG
Sbjct: 186 DKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG 236
Query: 227 -LAKLGPQGEKMNVTSRVMGTYGYCAPEYARS-----GELTVKSDVYSFGVILLELITGR 280
K+ G +S +GT Y +PE ++ G+ + D +S GV + E++ G
Sbjct: 237 SCLKMNDDGTVQ--SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
Query: 281 RVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMAD 313
V+ I + F+ P D+++
Sbjct: 295 TPFYAESLVETYGKIMNHEERFQFPSHVTDVSE 327
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLHHPNLVNLIGYCA 144
+G G FG + + ++VAVK ++R G + ++ E++ L HPN+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 145 DGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHDKANPPVIY 204
+V E+ SGG + + + + + ++ SG + Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS----YCHAMQ---VCH 138
Query: 205 RDLKSSNILLGANLDP--KLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYARSGELTV 262
RDLK N LL + P K+ FG +K + T +GT Y APE E
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT---VGTPAYIAPEVLLKKEYDG 195
Query: 263 K-SDVYSFGVILLELITG 279
K +DV+S GV L ++ G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 117/273 (42%), Gaps = 43/273 (15%)
Query: 64 AQTFT--FRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGM------ 115
A+ FT +E+ ++F ++G G FG V +++ ++ A+K L++ M
Sbjct: 59 AKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET 118
Query: 116 ---QGNKEFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNE 170
+ ++ LV + ++ LH+ D + LV ++ GG + LL E
Sbjct: 119 ACFREERDVLVNGDCQWITALHYA--------FQDENHLYLVMDYYVGGDLLT-LLSKFE 169
Query: 171 TKKPLD----WTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFG 226
K P D + M +A + L Y+H RD+K N+LL N +L+DFG
Sbjct: 170 DKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG 220
Query: 227 -LAKLGPQGEKMNVTSRVMGTYGYCAPEYARS-----GELTVKSDVYSFGVILLELITGR 280
K+ G +S +GT Y +PE ++ G+ + D +S GV + E++ G
Sbjct: 221 SCLKMNDDGTVQ--SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
Query: 281 RVIDTTRPVDEQNLIAWAQPIFRDPKRFPDMAD 313
V+ I + F+ P D+++
Sbjct: 279 TPFYAESLVETYGKIMNHEERFQFPSHVTDVSE 311
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 64 AQTFT--FRELAAATKNFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKE- 120
A+ FT +++ ++F ++G G FG V L++ +V A+K L++ M E
Sbjct: 59 AKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET 118
Query: 121 --FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLD-- 176
F E +L + L D + LV ++ GG + LL E + P +
Sbjct: 119 ACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLT-LLSKFEDRLPEEMA 177
Query: 177 --WTTRMKIASGAAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFG-LAKLGPQ 233
+ M IA + L Y+H RD+K NIL+ N +L+DFG KL
Sbjct: 178 RFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMED 228
Query: 234 GEKMNVTSRVMGTYGYCAPEYARS-----GELTVKSDVYSFGVILLELITGRRVIDTTRP 288
G +S +GT Y +PE ++ G + D +S GV + E++ G
Sbjct: 229 GTVQ--SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 286
Query: 289 VDEQNLIAWAQPIFRDPKRFPDMAD 313
V+ I + F+ P + D+++
Sbjct: 287 VETYGKIMNHKERFQFPTQVTDVSE 311
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 27/218 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPNLVNLIGY 142
+G G +G V G VA+K+L R K E+ +L + H N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 143 CA------DGDQRLLVYEFMSG--GSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYL 194
D LV FM G + H + L + +GL Y+
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKH--------EKLGEDRIQFLVYQMLKGLRYI 144
Query: 195 HDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEY 254
H +I+RDLK N+ + + + K+ DFGLA+ V +R Y APE
Sbjct: 145 HAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WYRAPEV 196
Query: 255 ARSG-ELTVKSDVYSFGVILLELITGRRVIDTTRPVDE 291
+ T D++S G I+ E+ITG+ + + +D+
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ 234
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 78 NFRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDR--NGMQGNKEFLVEVLMLSLLHHPN 135
N+ + L+G G +G VY ++ + VA+K+++R + K L E+ +L+ L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 136 LVNLIGYCADGDQRLLVYE--FMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEY 193
++ L D LL ++ ++ D L + +T L I G ++
Sbjct: 89 IIRLHDLIIPED--LLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 194 LHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKL----------------------G 231
+H+ +I+RDLK +N LL + K+ DFGLA+ G
Sbjct: 147 IHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 232 PQGE--KMNVTSRVMGTYGYCAPEYARSGE-LTVKSDVYSFGVILLELI 277
P + K +TS V+ T Y APE E T D++S G I EL+
Sbjct: 204 PHNKNLKKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 26/230 (11%)
Query: 79 FRQECLLGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFL----VEVLMLSLLHHP 134
+ + L+G+G FG+V K + + VA+K + + K FL +EV +L L++
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-----KNKKAFLNQAQIEVRLLELMNKH 110
Query: 135 N------LVNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAA 188
+ +V+L + + LV+E +S ++ D L + N L+ T K A
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTR--KFAQQMC 167
Query: 189 QGLEYLHDKANP--PVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
L +L A P +I+ DLK NILL +PK + G + + + +
Sbjct: 168 TALLFL---ATPELSIIHCDLKPENILL---CNPKRXAIKIVDFGSSCQLGQRIYQXIQS 221
Query: 247 YGYCAPEYARSGELTVKSDVYSFGVILLELITGRRVIDTTRPVDEQNLIA 296
Y +PE + D++S G IL+E+ TG + VD+ N I
Sbjct: 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGNKEFLV--EVLMLSLLHHPNLVNLIGY 142
LG G FG V++ S+ + K + ++G + LV E+ +L++ H N+++L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVK---VKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 143 CADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLH------- 195
++ ++++EF+SG + + +N + L+ + + L++LH
Sbjct: 70 FESMEELVMIFEFISGLDIFER---INTSAFELNEREIVSYVHQVCEALQFLHSHNIGHF 126
Query: 196 DKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTY-GYCAPEY 254
D +IY+ +SS I K+ +FG A+ G+ R++ T Y APE
Sbjct: 127 DIRPENIIYQTRRSSTI--------KIIEFGQARQLKPGDNF----RLLFTAPEYYAPEV 174
Query: 255 ARSGELTVKSDVYSFGVILLELITG 279
+ ++ +D++S G ++ L++G
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 141 GYCADGDQRLLVYEFMSGGSV---DDHLLDVNETKKPLDWTTRMK-IASGAAQGLEYLHD 196
G + D+ ++YE+M S+ D++ +++ +K I Y+H+
Sbjct: 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN 169
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVM---GTYGYCAPE 253
+ N + +RD+K SNIL+ N KLSDFG + E M V ++ GTY + PE
Sbjct: 170 EKN--ICHRDVKPSNILMDKNGRVKLSDFG------ESEYM-VDKKIKGSRGTYEFMPPE 220
Query: 254 YA--RSGELTVKSDVYSFGVIL 273
+ S K D++S G+ L
Sbjct: 221 FFSNESSYNGAKVDIWSLGICL 242
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 247 YGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHL 165
NL+G C G +++ EF G++ +L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 247 YGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHL 165
NL+G C G +++ EF G++ +L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 247 YGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHL 165
NL+G C G +++ EF G++ +L
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 187 AAQGLEYLHDKANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGT 246
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 247 YGYCAPEYARSGELTVKSDVYSFGVILLELIT 278
+ APE T++SDV+SFGV+L E+ +
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 85 LGEGGFGRVYKGTL-----QSNGQVVAVKQLDRNGMQGNKEFLVEVL--MLSLLHHPNLV 137
LG G FG+V + + + VAVK L L+ L ++ + HH N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 138 NLIGYCAD-GDQRLLVYEFMSGGSVDDHL 165
NL+G C G +++ EF G++ +L
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 85 LGEGGFGRVYKGTLQSNGQVVAVKQLDRNGMQGN--------KEFLVEVLMLSLLHHPNL 136
LG G FG V+ + + V VK + + + + + +E+ +LS + H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 137 VNLIGYCADGDQRLLVYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQGLEYLHD 196
+ ++ + LV E G +D L + LD I + YL
Sbjct: 92 IKVLDIFENQGFFQLVME-KHGSGLD--LFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL 148
Query: 197 KANPPVIYRDLKSSNILLGANLDPKLSDFGLAKLGPQGEKMNVTSRVMGTYGYCAPEYA- 255
K +I+RD+K NI++ + KL DFG A +G K+ T GT YCAPE
Sbjct: 149 KD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG-KLFYT--FCGTIEYCAPEVLM 202
Query: 256 ----RSGELTVKSDVYSFGVILLELI 277
R EL +++S GV L L+
Sbjct: 203 GNPYRGPEL----EMWSLGVTLYTLV 224
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 48/228 (21%)
Query: 82 ECLLGEGGFGRV-YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLH-HPNLVNL 139
E +LG G G V ++G+ Q G+ VAVK R + L+E+ +L+ HPN++
Sbjct: 38 EKILGYGSSGTVVFQGSFQ--GRPVAVK---RMLIDFCDIALMEIKLLTESDDHPNVIRY 92
Query: 140 IGYCADGDQRLL----------VYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
YC++ R L + + + +V D L + + P+ + +IASG A
Sbjct: 93 --YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI--SLLRQIASGVA- 147
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGA-------------NLDPKLSDFGLAKLGPQGE- 235
+LH + +I+RDLK NIL+ NL +SDFGL K G+
Sbjct: 148 ---HLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 236 --KMNVTSRVMGTYGYCAPEYARSG---ELTVKSDVYSFGVILLELIT 278
+ N+ + GT G+ APE LT D++S G + +++
Sbjct: 202 XFRXNLNN-PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 48/228 (21%)
Query: 82 ECLLGEGGFGRV-YKGTLQSNGQVVAVKQLDRNGMQGNKEFLVEVLMLSLLH-HPNLVNL 139
E +LG G G V ++G+ Q G+ VAVK R + L+E+ +L+ HPN++
Sbjct: 38 EKILGYGSSGTVVFQGSFQ--GRPVAVK---RMLIDFCDIALMEIKLLTESDDHPNVIRY 92
Query: 140 IGYCADGDQRLL----------VYEFMSGGSVDDHLLDVNETKKPLDWTTRMKIASGAAQ 189
YC++ R L + + + +V D L + + P+ + +IASG A
Sbjct: 93 --YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI--SLLRQIASGVA- 147
Query: 190 GLEYLHDKANPPVIYRDLKSSNILLGA-------------NLDPKLSDFGLAKLGPQGE- 235
+LH + +I+RDLK NIL+ NL +SDFGL K G+
Sbjct: 148 ---HLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 236 --KMNVTSRVMGTYGYCAPEYARSG---ELTVKSDVYSFGVILLELIT 278
+ N+ + GT G+ APE LT D++S G + +++
Sbjct: 202 XFRXNLNN-PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,229,719
Number of Sequences: 62578
Number of extensions: 448611
Number of successful extensions: 3978
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 963
Number of HSP's gapped (non-prelim): 1106
length of query: 519
length of database: 14,973,337
effective HSP length: 103
effective length of query: 416
effective length of database: 8,527,803
effective search space: 3547566048
effective search space used: 3547566048
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)