BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046897
(404 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 210 bits (535), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 123/316 (38%), Positives = 183/316 (57%), Gaps = 16/316 (5%)
Query: 46 TPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGT 105
P E + LK FS +L+ A+ NF ++LG GGFG V+KG +
Sbjct: 12 VPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL----------AD 61
Query: 106 GMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGS 164
G ++AVKRL ++ QG + ++ EV + H NL++L G+C+ RLLVY +M GS
Sbjct: 62 GTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 121
Query: 165 LENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHG-AETKVIYRDFKTSNILLDTNYNA 223
+ + L R PL W R ++ALG+A+G+A+LH + K+I+RD K +NILLD + A
Sbjct: 122 VASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 181
Query: 224 KLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
+ DFGLAK D HV V GT G+ APEYL+TG + K+DV+ +GV+LLE+++G+
Sbjct: 182 VVGDFGLAKLMDYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 284 RAVDKNRPSGEHN--LVEWAKPYLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLST 341
RA D R + + + L++W K L K K+ ++D L+G Y E + +AL C +
Sbjct: 241 RAFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 299
Query: 342 EGKFRPMMAEVVTVLE 357
RP M+EVV +LE
Sbjct: 300 SPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 182/316 (57%), Gaps = 16/316 (5%)
Query: 46 TPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGT 105
P E + LK FS +L+ A+ NF ++LG GGFG V+KG +
Sbjct: 4 VPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----------RLAD 53
Query: 106 GMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGS 164
G ++AVKRL ++ QG + ++ EV + H NL++L G+C+ RLLVY +M GS
Sbjct: 54 GXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 113
Query: 165 LENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHG-AETKVIYRDFKTSNILLDTNYNA 223
+ + L R PL W R ++ALG+A+G+A+LH + K+I+RD K +NILLD + A
Sbjct: 114 VASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173
Query: 224 KLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
+ DFGLAK D HV V G G+ APEYL+TG + K+DV+ +GV+LLE+++G+
Sbjct: 174 VVGDFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 232
Query: 284 RAVDKNRPSGEHN--LVEWAKPYLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLST 341
RA D R + + + L++W K L K K+ ++D L+G Y E + +AL C +
Sbjct: 233 RAFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 291
Query: 342 EGKFRPMMAEVVTVLE 357
RP M+EVV +LE
Sbjct: 292 SPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 173/300 (57%), Gaps = 16/300 (5%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW 125
DL+ AT NF ++G G FG V+KG + + G +A+KR + QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
E+ L HP+LV L+G+C E + +L+Y++M G+L+ HL+ +SW RL
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
++ +GAA+G+ +LH +I+RD K+ NILLD N+ K++DFG++K G DQ+H+
Sbjct: 143 EICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL 305
V GT GY PEY G LT KSDVYSFGVVL E+L R A+ ++ P NL EWA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES- 259
Query: 306 ASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLE---QLQDS 362
+ ++ +I+D L + E K A++CL+ + RP M +V+ LE +LQ+S
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 172/300 (57%), Gaps = 16/300 (5%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW 125
DL+ AT NF ++G G FG V+KG + + G +A+KR + QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
E+ L HP+LV L+G+C E + +L+Y++M G+L+ HL+ +SW RL
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
++ +GAA+G+ +LH +I+RD K+ NILLD N+ K++DFG++K G Q+H+
Sbjct: 143 EICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL 305
V GT GY PEY G LT KSDVYSFGVVL E+L R A+ ++ P NL EWA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES- 259
Query: 306 ASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLE---QLQDS 362
+ ++ +I+D L + E K A++CL+ + RP M +V+ LE +LQ+S
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 178/310 (57%), Gaps = 24/310 (7%)
Query: 61 SFSFSDLKTATRNF--RPDSV----LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL 114
SFSF +LK T NF RP SV +GEGGFG V+KG+++ + A K + I + L
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 115 NQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGS 174
Q ++ E+ + + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 74 KQ-------QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 126
Query: 175 YFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG 234
PLSW++R K+A GAA G+ FLH E I+RD K++NILLD + AK+SDFGLA+
Sbjct: 127 T-PPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGE 294
Q+ + +R++GT Y APE L G +T KSD+YSFGVVLLE+++G AVD++R
Sbjct: 184 EKFAQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-- 240
Query: 295 HNLVEWAKPYLASKRKIFRIIDNRLE--GQYTLEGAYKAATLALRCLSTEGKFRPMMAEV 352
L++ + ++ I ID ++ ++E Y A+ +CL + RP + +V
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVAS---QCLHEKKNKRPDIKKV 297
Query: 353 VTVLEQLQDS 362
+L+++ S
Sbjct: 298 QQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 177/310 (57%), Gaps = 24/310 (7%)
Query: 61 SFSFSDLKTATRNF--RPDSV----LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL 114
SFSF +LK T NF RP SV +GEGGFG V+KG+++ + A K + I + L
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 115 NQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGS 174
Q ++ E+ + + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 74 KQ-------QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 126
Query: 175 YFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG 234
PLSW++R K+A GAA G+ FLH E I+RD K++NILLD + AK+SDFGLA+
Sbjct: 127 T-PPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGE 294
Q+ + R++GT Y APE L G +T KSD+YSFGVVLLE+++G AVD++R
Sbjct: 184 EKFAQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-- 240
Query: 295 HNLVEWAKPYLASKRKIFRIIDNRLE--GQYTLEGAYKAATLALRCLSTEGKFRPMMAEV 352
L++ + ++ I ID ++ ++E Y A+ +CL + RP + +V
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVAS---QCLHEKKNKRPDIKKV 297
Query: 353 VTVLEQLQDS 362
+L+++ S
Sbjct: 298 QQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 176/310 (56%), Gaps = 24/310 (7%)
Query: 61 SFSFSDLKTATRNF--RPDSV----LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL 114
SFSF +LK T NF RP SV +GEGGFG V+KG+++ + A K + I + L
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 67
Query: 115 NQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGS 174
Q ++ E+ + + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 68 KQ-------QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 120
Query: 175 YFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG 234
PLSW++R K+A GAA G+ FLH E I+RD K++NILLD + AK+SDFGLA+
Sbjct: 121 T-PPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARAS 177
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGE 294
Q + R++GT Y APE L G +T KSD+YSFGVVLLE+++G AVD++R
Sbjct: 178 EKFAQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-- 234
Query: 295 HNLVEWAKPYLASKRKIFRIIDNRLE--GQYTLEGAYKAATLALRCLSTEGKFRPMMAEV 352
L++ + ++ I ID ++ ++E Y A+ +CL + RP + +V
Sbjct: 235 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVAS---QCLHEKKNKRPDIKKV 291
Query: 353 VTVLEQLQDS 362
+L+++ S
Sbjct: 292 QQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 169/306 (55%), Gaps = 24/306 (7%)
Query: 61 SFSFSDLKTATRNF--RPDSV----LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL 114
SFSF +LK T NF RP SV GEGGFG V+KG+++ + A K + I + L
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 64
Query: 115 NQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGS 174
Q ++ E+ + H NLV+L+G+ + D LVY + P GSL + L
Sbjct: 65 KQ-------QFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDG 117
Query: 175 YFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG 234
PLSW+ R K+A GAA G+ FLH E I+RD K++NILLD + AK+SDFGLA+
Sbjct: 118 T-PPLSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARAS 174
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGE 294
Q +R++GT Y APE L G +T KSD+YSFGVVLLE+++G AVD++R
Sbjct: 175 EKFAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-- 231
Query: 295 HNLVEWAKPYLASKRKIFRIIDNRLE--GQYTLEGAYKAATLALRCLSTEGKFRPMMAEV 352
L++ + ++ I ID + ++E Y A+ +CL + RP + +V
Sbjct: 232 QLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVAS---QCLHEKKNKRPDIKKV 288
Query: 353 VTVLEQ 358
+L++
Sbjct: 289 QQLLQE 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK--EWLAEVNYLGQLYH 137
+G G FG+V + + H G +AVK L + F + E+L EV + +L H
Sbjct: 45 IGAGSFGTVHRA--EWH---------GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
PN+V +G + + +V E++ RGSL L + G+ Q L RL +A AKG+ +
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNY 152
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
LH +++RD K+ N+L+D Y K+ DFGL++ S GT + APE
Sbjct: 153 LHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEV 210
Query: 258 LATGHLTAKSDVYSFGVVLLEM 279
L KSDVYSFGV+L E+
Sbjct: 211 LRDEPSNEKSDVYSFGVILWEL 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 16/202 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK--EWLAEVNYLGQLYH 137
+G G FG+V + + H G +AVK L + F + E+L EV + +L H
Sbjct: 45 IGAGSFGTVHRA--EWH---------GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
PN+V +G + + +V E++ RGSL L + G+ Q L RL +A AKG+ +
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNY 152
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
LH +++R+ K+ N+L+D Y K+ DFGL++ + S S GT + APE
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEV 210
Query: 258 LATGHLTAKSDVYSFGVVLLEM 279
L KSDVYSFGV+L E+
Sbjct: 211 LRDEPSNEKSDVYSFGVILWEL 232
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 134/293 (45%), Gaps = 26/293 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE-WLAEVNYLGQLYHP 138
LGEG FG V + + T GTG ++AVK L D H+ W E++ L LYH
Sbjct: 39 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 139 NLVKLVGYCLEDD---HRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
+++K G C ED LV E++P GSL ++L R L L A +G+
Sbjct: 94 HIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGM 147
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH-VSTRVMGTYGYAA 254
A+LH I+RD N+LLD + K+ DFGLAK P G + + V + A
Sbjct: 148 AYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA 205
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRI 314
PE L SDV+SFGV L E+L+ + ++ P+ L+ A+ + + R+
Sbjct: 206 PECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQ----GQMTVLRL 260
Query: 315 IDNRLEGQYTLEGAYKAAT---LALRCLSTEGKFRPMMAEVVTVLEQLQDSSE 364
+ G+ A L C TE FRP ++ +L+ + + +
Sbjct: 261 TELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 134/289 (46%), Gaps = 24/289 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQD-GFQGHKEWLAEVNYLGQLYHP 138
LGEG FG V + + T GTG ++AVK L D G Q W E++ L LYH
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 139 NLVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
+++K G C + + LV E++P GSL ++L R L L A +G+A
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMA 131
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH-VSTRVMGTYGYAAP 255
+LH I+R+ N+LLD + K+ DFGLAK P G + + V + AP
Sbjct: 132 YLHAQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRII 315
E L SDV+SFGV L E+L+ + ++ P+ L+ A+ + + R+
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQ----GQMTVLRLT 244
Query: 316 DNRLEGQYTL---EGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQD 361
+ G+ + + L C TE FRP ++ +L+ + +
Sbjct: 245 ELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 134/289 (46%), Gaps = 24/289 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQD-GFQGHKEWLAEVNYLGQLYHP 138
LGEG FG V + + T GTG ++AVK L D G Q W E++ L LYH
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 139 NLVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
+++K G C + + LV E++P GSL ++L R L L A +G+A
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMA 131
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH-VSTRVMGTYGYAAP 255
+LH I+R+ N+LLD + K+ DFGLAK P G + + V + AP
Sbjct: 132 YLHSQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRII 315
E L SDV+SFGV L E+L+ + ++ P+ L+ A+ + + R+
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQ----GQMTVLRLT 244
Query: 316 DNRLEGQYTL---EGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQD 361
+ G+ + + L C TE FRP ++ +L+ + +
Sbjct: 245 ELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 94 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 147
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 204
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD--GPTGDQSHVSTRVMGTYGY 252
+ FL A K ++RD N +LD + K++DFGLA+D D H T +
Sbjct: 205 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 303
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 304 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 143
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD--GPTGDQSHVSTRVMGTYGY 252
+ FL A K ++RD N +LD + K++DFGLA+D D H T +
Sbjct: 144 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 242
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 243 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 145
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD--GPTGDQSHVSTRVMGTYGY 252
+ FL A K ++RD N +LD + K++DFGLA+D D H T +
Sbjct: 146 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 244
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 245 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 145
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD--GPTGDQSHVSTRVMGTYGY 252
+ FL A K ++RD N +LD + K++DFGLA+D D H T +
Sbjct: 146 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 244
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 245 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 40 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 93
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 150
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD--GPTGDQSHVSTRVMGTYGY 252
+ FL A K ++RD N +LD + K++DFGLA+D D H T +
Sbjct: 151 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 249
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 250 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 294
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 146
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD--GPTGDQSHVSTRVMGTYGY 252
+ FL A K ++RD N +LD + K++DFGLA+D D H T +
Sbjct: 147 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 245
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 246 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 146
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD--GPTGDQSHVSTRVMGTYGY 252
+ FL A K ++RD N +LD + K++DFGLA+D D H T +
Sbjct: 147 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 245
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 246 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 128/292 (43%), Gaps = 24/292 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQD-GFQGHKEWLAEVNYLGQLYHP 138
LGEG FG V + + T GTG ++AVK L + G Q W E+ L LYH
Sbjct: 16 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 139 NLVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
++VK G C + + LV E++P GSL ++L R L L A +G+A
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMA 125
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH-VSTRVMGTYGYAAP 255
+LH I+R N+LLD + K+ DFGLAK P G + + V + AP
Sbjct: 126 YLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 183
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRII 315
E L SDV+SFGV L E+L+ D N+ H + + + R+
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELLT---YCDSNQSP--HTKFTELIGHTQGQMTVLRLT 238
Query: 316 DNRLEGQYTL---EGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSE 364
+ G+ + L C TE FRP +V +L+ Q+ +
Sbjct: 239 ELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 290
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 128/292 (43%), Gaps = 24/292 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQD-GFQGHKEWLAEVNYLGQLYHP 138
LGEG FG V + + T GTG ++AVK L + G Q W E+ L LYH
Sbjct: 17 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 139 NLVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
++VK G C + + LV E++P GSL ++L R L L A +G+A
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMA 126
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH-VSTRVMGTYGYAAP 255
+LH I+R N+LLD + K+ DFGLAK P G + + V + AP
Sbjct: 127 YLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 184
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRII 315
E L SDV+SFGV L E+L+ D N+ H + + + R+
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELLT---YCDSNQ--SPHTKFTELIGHTQGQMTVLRLT 239
Query: 316 DNRLEGQYTL---EGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSE 364
+ G+ + L C TE FRP +V +L+ Q+ +
Sbjct: 240 ELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 291
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 34/286 (11%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYH 137
V+G G FG V+KG + S P +A+K L + + ++L E +GQ H
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
N+++L G + +++ E+M G+L+ L + F L L+ G A G+ +
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKY 162
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVMGTYGYAA 254
L A ++RD NIL+++N K+SDFGL++ D P + ++ + A
Sbjct: 163 L--ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRWTA 218
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA-SKRKIFR 313
PE ++ T+ SDV+SFG+V+ E+++ GE +PY S ++ +
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMT----------YGE-------RPYWELSNHEVMK 261
Query: 314 IIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQL 359
I++ ++ L ++C E RP A++V++L++L
Sbjct: 262 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
+G G FG V G W+++ +A+K + ++G ++++ E + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-REGAMSEEDFIEEAEVMMKLSHP 62
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G CLE LV+EFM G L ++L + F L + L +G+A+L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 119
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
E VI+RD N L+ N K+SDFG+ + DQ ST +A+PE
Sbjct: 120 E--EASVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 176
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGE 294
+ ++KSDV+SFGV++ E+ S + +NR + E
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 147/310 (47%), Gaps = 37/310 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E+M GSL++ L + + F + L+ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
A G+ +L ++ ++RD NIL+++N K+SDFGLA+ D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ +PE +A T+ SDV+S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETG 366
S + + + +D ++ L L C + RP ++V++L++L + +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 367 NIRCNTHNRP 376
I + RP
Sbjct: 315 KIITSAAARP 324
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
+G G FG V G W+++ +A+K + ++G ++++ E + +L HP
Sbjct: 13 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-REGAMSEEDFIEEAEVMMKLSHP 60
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G CLE LV+EFM G L ++L + F L + L +G+A+L
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 117
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
E VI+RD N L+ N K+SDFG+ + DQ ST +A+PE
Sbjct: 118 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 174
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGE 294
+ ++KSDV+SFGV++ E+ S + +NR + E
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
+G G FG V G W+++ +A+K + ++G ++++ E + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-REGAMSEEDFIEEAEVMMKLSHP 62
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G CLE LV+EFM G L ++L + F L + L +G+A+L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 119
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
E VI+RD N L+ N K+SDFG+ + DQ ST +A+PE
Sbjct: 120 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 176
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGE 294
+ ++KSDV+SFGV++ E+ S + +NR + E
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
+G G FG V G W+++ +A+K + ++G ++++ E + +L HP
Sbjct: 18 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-REGAMSEEDFIEEAEVMMKLSHP 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G CLE LV+EFM G L ++L + F L + L +G+A+L
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 122
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
E VI+RD N L+ N K+SDFG+ + DQ ST +A+PE
Sbjct: 123 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 179
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGE 294
+ ++KSDV+SFGV++ E+ S + +NR + E
Sbjct: 180 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 118/237 (49%), Gaps = 22/237 (9%)
Query: 61 SFSFSDLKTATRN-FRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDG 118
F S L T N + +G+GGFG V KG + + S A K +++ +
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEM 63
Query: 119 FQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQP 178
+ +E+ EV + L HPN+VKL Y L + +V EF+P G L + L + P
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA---HP 118
Query: 179 LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNIL---LDTN--YNAKLSDFGLAKD 233
+ W+++L++ L A G+ ++ +++RD ++ NI LD N AK++DFGL++
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ 178
Query: 234 GPTGDQSHVSTRVMGTYGYAAPEYLATGH--LTAKSDVYSFGVVLLEMLSGRRAVDK 288
H + ++G + + APE + T K+D YSF ++L +L+G D+
Sbjct: 179 S-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 37/310 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E+M GSL++ L + + F + L+ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
A G+ +L ++ ++RD NIL+++N K+SDFGL++ D P + ++
Sbjct: 156 IASGMKYL--SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ +PE +A T+ SDV+S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETG 366
S + + + +D ++ L L C + RP ++V++L++L + +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 367 NIRCNTHNRP 376
I + RP
Sbjct: 315 KIITSAAARP 324
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 37/310 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E+M GSL++ L + + F + L+ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
A G+ +L ++ ++RD NIL+++N K+SDFGL++ D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ +PE +A T+ SDV+S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETG 366
S + + + +D ++ L L C + RP ++V++L++L + +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 367 NIRCNTHNRP 376
I + RP
Sbjct: 315 KIITSAAARP 324
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 37/310 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E+M GSL++ L + + F + L+ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
A G+ +L ++ ++RD NIL+++N K+SDFGL++ D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ +PE +A T+ SDV+S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETG 366
S + + + +D ++ L L C + RP ++V++L++L + +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 367 NIRCNTHNRP 376
I + RP
Sbjct: 315 KIITSAAARP 324
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 37/310 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E+M GSL++ L + + F + L+ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
A G+ +L ++ ++RD NIL+++N K+SDFGL++ D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ +PE +A T+ SDV+S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETG 366
S + + + +D ++ L L C + RP ++V++L++L + +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 367 NIRCNTHNRP 376
I + RP
Sbjct: 315 KIITSAAARP 324
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
+G G FG V G W+++ +A+K + ++G +++ E + +L HP
Sbjct: 35 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-KEGSMSEDDFIEEAEVMMKLSHP 82
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G CLE LV+EFM G L ++L + F L + L +G+A+L
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 139
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
E VI+RD N L+ N K+SDFG+ + DQ ST +A+PE
Sbjct: 140 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 196
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGE 294
+ ++KSDV+SFGV++ E+ S + +NR + E
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 145/321 (45%), Gaps = 54/321 (16%)
Query: 59 LKSFSFSDLKTATRNF---------RPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVI 109
+ F+F D A R F + + V+G G FG V G + PG +
Sbjct: 11 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHL-------KLPGKREIF 63
Query: 110 AVKRLNQDGF--QGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLEN 167
+ + G+ + +++L+E + +GQ HPN++ L G + +++ EFM GSL++
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 168 HLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSD 227
L + F + L+ G A G+ +L A+ ++RD NIL+++N K+SD
Sbjct: 124 FLRQNDGQFTVIQLVGMLR---GIAAGMKYL--ADMNYVHRDLAARNILVNSNLVCKVSD 178
Query: 228 FGLAK--DGPTGDQSHVSTRVMG---TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
FGL++ + T D ++ S +G + APE + T+ SDV+S+G+V+ E++S
Sbjct: 179 FGLSRFLEDDTSDPTYTSA--LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS- 235
Query: 283 RRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLEGQYTLEGAYKAAT----LALRC 338
GE +PY + + N +E Y L + L L C
Sbjct: 236 ---------YGE-------RPYWDMTNQ---DVINAIEQDYRLPPPMDCPSALHQLMLDC 276
Query: 339 LSTEGKFRPMMAEVVTVLEQL 359
+ RP ++V L+++
Sbjct: 277 WQKDRNHRPKFGQIVNTLDKM 297
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 37/310 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 86
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E+M GSL++ L + + F + L+ G
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 143
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
A G+ +L ++ ++RD NIL+++N K+SDFGL++ D P + ++
Sbjct: 144 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 200
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ +PE +A T+ SDV+S+G+VL E++S GE +PY
Sbjct: 201 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 242
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETG 366
S + + + +D ++ L L C + RP ++V++L++L + +
Sbjct: 243 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 302
Query: 367 NIRCNTHNRP 376
I + RP
Sbjct: 303 KIITSAAARP 312
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 37/310 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E+M GSL++ L + + F + L+ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
A G+ +L ++ ++RD NIL+++N K+SDFGL++ D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ +PE +A T+ SDV+S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETG 366
S + + + +D ++ L L C + RP ++V++L++L + +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 367 NIRCNTHNRP 376
I + RP
Sbjct: 315 KIITSAAARP 324
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 144
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GY 252
+ +L A K ++RD N +LD + K++DFGLA+D + V + +
Sbjct: 145 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 243
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 244 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 147/308 (47%), Gaps = 33/308 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 96
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E+M GSL++ L + + F + L+ G
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 153
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT- 249
A G+ +L ++ ++RD NIL+++N K+SDFGL++ ++ +TR
Sbjct: 154 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-ASK 308
+ +PE +A T+ SDV+S+G+VL E++S GE +PY S
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEMSN 254
Query: 309 RKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETGNI 368
+ + + +D ++ L L C + RP ++V++L++L + + I
Sbjct: 255 QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 314
Query: 369 RCNTHNRP 376
+ RP
Sbjct: 315 ITSAAARP 322
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 37/310 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 69
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E+M GSL++ L + + F + L+ G
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 126
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
A G+ +L ++ ++RD NIL+++N K+SDFGL++ D P + ++
Sbjct: 127 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 183
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ +PE +A T+ SDV+S+G+VL E++S GE +PY
Sbjct: 184 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 225
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETG 366
S + + + +D ++ L L C + RP ++V++L++L + +
Sbjct: 226 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 285
Query: 367 NIRCNTHNRP 376
I + RP
Sbjct: 286 KIITSAAARP 295
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 54 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 136 YHPNLVKLVGYCLEDD-HRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 164
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD--QSHVSTRVMGTYGY 252
+ +L A K ++RD N +LD + K++DFGLA+D + H T +
Sbjct: 165 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 263
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 264 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 308
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 53 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 163
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD--QSHVSTRVMGTYGY 252
+ +L A K ++RD N +LD + K++DFGLA+D + H T +
Sbjct: 164 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 262
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 263 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 307
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 37/310 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E+M GSL++ L + + F + L+ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
A G+ +L ++ ++RD NIL+++N K+SDFGL + D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ +PE +A T+ SDV+S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETG 366
S + + + +D ++ L L C + RP ++V++L++L + +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 367 NIRCNTHNRP 376
I + RP
Sbjct: 315 KIITSAAARP 324
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 145
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD--QSHVSTRVMGTYGY 252
+ +L A K ++RD N +LD + K++DFGLA+D + H T +
Sbjct: 146 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 244
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 245 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 112/218 (51%), Gaps = 23/218 (10%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
+G+GGFG V KG + + S A K +++ + + +E+ EV + L HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
N+VKL Y L + +V EF+P G L + L + P+ W+++L++ L A G+ ++
Sbjct: 84 NIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYM 138
Query: 199 HGAETKVIYRDFKTSNIL---LDTN--YNAKLSDFGLAKDGPTGDQS-HVSTRVMGTYGY 252
+++RD ++ NI LD N AK++DFG T QS H + ++G + +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG------TSQQSVHSVSGLLGNFQW 192
Query: 253 AAPEYLATGH--LTAKSDVYSFGVVLLEMLSGRRAVDK 288
APE + T K+D YSF ++L +L+G D+
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 144
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD--QSHVSTRVMGTYGY 252
+ +L A K ++RD N +LD + K++DFGLA+D + H T +
Sbjct: 145 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 243
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 244 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 32 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 136 YHPNLVKLVGYCLEDD-HRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 142
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD--QSHVSTRVMGTYGY 252
+ +L A K ++RD N +LD + K++DFGLA+D + H T +
Sbjct: 143 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 241
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 242 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 286
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 145
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD--QSHVSTRVMGTYGY 252
+ +L A K ++RD N +LD + K++DFGLA+D + H T +
Sbjct: 146 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 244
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 245 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 30 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 136 YHPNLVKLVGYCLEDD-HRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 140
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD--QSHVSTRVMGTYGY 252
+ +L A K ++RD N +LD + K++DFGLA+D + H T +
Sbjct: 141 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 239
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 240 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 37/310 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E M GSL++ L + + F + L+ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
A G+ +L ++ ++RD NIL+++N K+SDFGL++ D P + ++
Sbjct: 156 IASGMKYL--SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ +PE +A T+ SDV+S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETG 366
S + + + +D ++ L L C + RP ++V++L++L + +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 367 NIRCNTHNRP 376
I + RP
Sbjct: 315 KIITSAAARP 324
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
+G G FG V G W+++ +A+K + ++G ++++ E + +L HP
Sbjct: 16 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-REGAMSEEDFIEEAEVMMKLSHP 63
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G CLE LV EFM G L ++L + F L + L +G+A+L
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 120
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
E VI+RD N L+ N K+SDFG+ + DQ ST +A+PE
Sbjct: 121 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 177
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGE 294
+ ++KSDV+SFGV++ E+ S + +NR + E
Sbjct: 178 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 143
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD--QSHVSTRVMGTYGY 252
+ +L A K ++RD N +LD + K++DFGLA+D + H T +
Sbjct: 144 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 242
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 243 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++L E +
Sbjct: 27 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 80
Query: 136 YHPNLVKLVGYCLEDDHR-LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L+G CL + L+V +M G L N F R P +L + L AKG
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 137
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD--QSHVSTRVMGTYGY 252
+ +L A K ++RD N +LD + K++DFGLA+D + H T +
Sbjct: 138 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
A E L T T KSDV+SFGV+L E+++ A PY F
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMT-----------------RGAPPY--PDVNTF 236
Query: 313 RIIDNRLEGQYTLEGAYKAATL---ALRCLSTEGKFRPMMAEVVT 354
I L+G+ L+ Y L L+C + + RP +E+V+
Sbjct: 237 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 281
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 111/217 (51%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
+G+GGFG V KG + + S A K +++ + + +E+ EV + L HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
N+VKL G L + +V EF+P G L + L + P+ W+++L++ L A G+ ++
Sbjct: 84 NIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYM 138
Query: 199 HGAETKVIYRDFKTSNIL---LDTN--YNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
+++RD ++ NI LD N AK++DF L++ H + ++G + +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS-----VHSVSGLLGNFQWM 193
Query: 254 APEYLATGH--LTAKSDVYSFGVVLLEMLSGRRAVDK 288
APE + T K+D YSF ++L +L+G D+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 37/310 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E M GSL++ L + + F + L+ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
A G+ +L ++ ++RD NIL+++N K+SDFGL++ D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ +PE +A T+ SDV+S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETG 366
S + + + +D ++ L L C + RP ++V++L++L + +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 367 NIRCNTHNRP 376
I + RP
Sbjct: 315 KIITSAAARP 324
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 48/314 (15%)
Query: 62 FSFSDLKTATRNF---------RPDSVLGEGGFGSVFKGWIDEHSFAATKPGT-GMVIAV 111
F+F D A R F + + V+G G FG V G + PG + +A+
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRL-------KVPGKREICVAI 62
Query: 112 KRLNQDGF--QGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHL 169
K L + G+ + +++L+E + +GQ HPN++ L G + +++ E+M GSL+ L
Sbjct: 63 KTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
Query: 170 FRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFG 229
+ F + L+ G G+ +L ++ ++RD NIL+++N K+SDFG
Sbjct: 122 RKNDGRFTVIQLVGMLR---GIGSGMKYL--SDMSAVHRDLAARNILVNSNLVCKVSDFG 176
Query: 230 LAK---DGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
+++ D P + ++ + APE +A T+ SDV+S+G+V+ E++S
Sbjct: 177 MSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS----- 229
Query: 287 DKNRPSGEHNLVEWAKPYL-ASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKF 345
GE +PY S + + + I+ ++ L L C E
Sbjct: 230 -----YGE-------RPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSD 277
Query: 346 RPMMAEVVTVLEQL 359
RP ++V +L++L
Sbjct: 278 RPKFGQIVNMLDKL 291
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 37/310 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVN 130
N D V+G G FG V G + S + +A+K L + G+ + +++L E +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTL-KVGYTEKQRRDFLGEAS 69
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN+++L G + ++V E M GSL++ L + + F + L+ G
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---G 126
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
A G+ +L ++ ++RD NIL+++N K+SDFGL++ D P + ++
Sbjct: 127 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 183
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ +PE +A T+ SDV+S+G+VL E++S GE +PY
Sbjct: 184 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 225
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQDSSETG 366
S + + + +D ++ L L C + RP ++V++L++L + +
Sbjct: 226 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 285
Query: 367 NIRCNTHNRP 376
I + RP
Sbjct: 286 KIITSAAARP 295
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 48/290 (16%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
+ V+G G FG V K + A +A+K++ + + K ++ E+ L ++
Sbjct: 14 EEVVGRGAFGVVCKA-----KWRAKD------VAIKQIESESER--KAFIVELRQLSRVN 60
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLEN--HLFRRGSYF---QPLSWNLRLKVALGA 191
HPN+VKL G CL + LV E+ GSL N H Y+ +SW L+
Sbjct: 61 HPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------C 112
Query: 192 AKGVAFLHGAETK-VIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQSHVSTRVMGT 249
++GVA+LH + K +I+RD K N+LL K+ DFG A D Q+H+ T G+
Sbjct: 113 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNNKGS 167
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKR 309
+ APE + + K DV+S+G++L E+++ R+ D+ G + WA + ++
Sbjct: 168 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAV-HNGTRP 224
Query: 310 KIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQL 359
+ + + +E +L RC S + RP M E+V ++ L
Sbjct: 225 PLIKNLPKPIE------------SLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 48/290 (16%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
+ V+G G FG V K + A +A+K++ + + K ++ E+ L ++
Sbjct: 13 EEVVGRGAFGVVCKA-----KWRAKD------VAIKQIESESER--KAFIVELRQLSRVN 59
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLEN--HLFRRGSYF---QPLSWNLRLKVALGA 191
HPN+VKL G CL + LV E+ GSL N H Y+ +SW L+
Sbjct: 60 HPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------C 111
Query: 192 AKGVAFLHGAETK-VIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQSHVSTRVMGT 249
++GVA+LH + K +I+RD K N+LL K+ DFG A D Q+H+ T G+
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNNKGS 166
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKR 309
+ APE + + K DV+S+G++L E+++ R+ D+ G + WA + ++
Sbjct: 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAV-HNGTRP 223
Query: 310 KIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQL 359
+ + + +E +L RC S + RP M E+V ++ L
Sbjct: 224 PLIKNLPKPIE------------SLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LGEG FG VF + ++ + TK M++AVK L K++ E L L H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF------QP------LSWNLRLKV 187
+VK G C + D ++V+E+M G L L G QP L + L +
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
A A G+ +L A ++RD T N L+ N K+ DFG+++D + D V M
Sbjct: 139 ASQIASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ PE + T +SDV+SFGV+L E+ +
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 40/229 (17%)
Query: 77 DSVLGEGGFGSVFKG-WI-DEHSFAATK--PGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ ++G GGFG V++ WI DE + A + P + ++ + Q E
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQ-----------EAKLF 60
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
L HPN++ L G CL++ + LV EF G L L G P ++ + A+ A
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPP---DILVNWAVQIA 115
Query: 193 KGVAFLHG-AETKVIYRDFKTSNILLD--------TNYNAKLSDFGLAKDGPTGDQSHVS 243
+G+ +LH A +I+RD K+SNIL+ +N K++DFGLA+ + H +
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRT 169
Query: 244 TRV--MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR---RAVD 287
T++ G Y + APE + + SDV+S+GV+L E+L+G R +D
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 50 EGEILRSPNLKSFSFSDL---KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTG 106
+G I+ +P FSD R+ LGEG FG VF + H+ +
Sbjct: 20 QGHIIENPQY----FSDACVHHIKRRDIVLKWELGEGAFGKVFLA--ECHNLLPEQ--DK 71
Query: 107 MVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLE 166
M++AVK L + +++ E L L H ++V+ G C E L+V+E+M G L
Sbjct: 72 MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 167 NHLFRRGSYFQ-----------PLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNI 215
L G + PL L VA A G+ +L G ++RD T N
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG--LHFVHRDLATRNC 189
Query: 216 LLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVV 275
L+ K+ DFG+++D + D V R M + PE + T +SDV+SFGVV
Sbjct: 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 249
Query: 276 LLEMLS 281
L E+ +
Sbjct: 250 LWEIFT 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LGEG FG VF + H+ + M++AVK L + +++ E L L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ-----------PLSWNLRLKVA 188
+V+ G C E L+V+E+M G L L G + PL L VA
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
A G+ +L G ++RD T N L+ K+ DFG+++D + D V R M
Sbjct: 142 SQVAAGMVYLAG--LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ PE + T +SDV+SFGVVL E+ +
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 135/293 (46%), Gaps = 43/293 (14%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTG-MVIAVKRLNQDGF--QGHKEWLAEVNYLG 133
+ V+G G FG V +G + PG +A+K L + G+ + +E+L+E + +G
Sbjct: 21 EEVIGAGEFGEVCRGRL-------KAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMG 72
Query: 134 QLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
Q HPN+++L G +++ EFM G+L++ L F + L+ G A
Sbjct: 73 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIAS 129
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG---TY 250
G+ +L AE ++RD NIL+++N K+SDFGL++ T +G
Sbjct: 130 GMRYL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRK 310
+ APE +A T+ SD +S+G+V+ E++S GE +PY +
Sbjct: 188 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMS----------FGE-------RPYWDMSNQ 230
Query: 311 IFRIIDNRLEGQYTLEGAYKAAT----LALRCLSTEGKFRPMMAEVVTVLEQL 359
+ N +E Y L T L L C + RP +VV+ L+++
Sbjct: 231 ---DVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LGEG FG VF + +++AVK L K++ E L L H +
Sbjct: 21 LGEGAFGKVFLA----ECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHL---------FRRGSYFQPLSWNLRLKVALG 190
+VK G C+E D ++V+E+M G L L G+ L+ + L +A
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
A G+ +L A ++RD T N L+ N K+ DFG+++D + D V M
Sbjct: 137 IAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ PE + T +SDV+S GVVL E+ +
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LGEG FG VF + H+ + M++AVK L + +++ E L L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ-----------PLSWNLRLKVA 188
+V+ G C E L+V+E+M G L L G + PL L VA
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
A G+ +L G ++RD T N L+ K+ DFG+++D + D V R M
Sbjct: 136 SQVAAGMVYLAG--LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ PE + T +SDV+SFGVVL E+ +
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 34/292 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 19 LGGGQFGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q +S + L +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 260 TGHLTAKSDVYSFGVVLLEMLS-GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNR 318
+ KSDV++FGV+L E+ + G PS + L+E K +R+ R
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE----------KDYRM--ER 231
Query: 319 LEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQL-QDSSETGNIR 369
EG K L C RP AE+ E + Q+SS + +
Sbjct: 232 PEG-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 278
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 135/293 (46%), Gaps = 43/293 (14%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTG-MVIAVKRLNQDGF--QGHKEWLAEVNYLG 133
+ V+G G FG V +G + PG +A+K L + G+ + +E+L+E + +G
Sbjct: 19 EEVIGAGEFGEVCRGRL-------KAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMG 70
Query: 134 QLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
Q HPN+++L G +++ EFM G+L++ L F + L+ G A
Sbjct: 71 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIAS 127
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG---TY 250
G+ +L AE ++RD NIL+++N K+SDFGL++ T +G
Sbjct: 128 GMRYL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRK 310
+ APE +A T+ SD +S+G+V+ E++S GE +PY +
Sbjct: 186 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMS----------FGE-------RPYWDMSNQ 228
Query: 311 IFRIIDNRLEGQYTLEGAYKAAT----LALRCLSTEGKFRPMMAEVVTVLEQL 359
+ N +E Y L T L L C + RP +VV+ L+++
Sbjct: 229 ---DVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ EF+P GSL +L + + L+ KG+ +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL---LQYTSQICKGMEY 132
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 133 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 189
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 109/235 (46%), Gaps = 32/235 (13%)
Query: 72 RNFRPDS-----VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWL 126
R FRP VLG+G FG K T TG V+ +K L + + + +L
Sbjct: 5 RIFRPSDLIHGEVLGKGCFGQAIK---------VTHRETGEVMVMKELIRFDEETQRTFL 55
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV + L HPN++K +G +D + E++ G+L + S + W+ R+
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQY---PWSQRVS 112
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLA------KDGPTGDQS 240
A A G+A+LH +I+RD + N L+ N N ++DFGLA K P G +S
Sbjct: 113 FAKDIASGMAYLHS--MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170
Query: 241 ------HVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKN 289
V+G + APE + K DV+SFG+VL E++ GR D +
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPD 224
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 134/286 (46%), Gaps = 34/286 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 19 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q +S + L +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 260 TGHLTAKSDVYSFGVVLLEMLS-GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNR 318
+ KSDV++FGV+L E+ + G PS + L+E K +R+ R
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE----------KDYRM--ER 231
Query: 319 LEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQL-QDSS 363
EG K L C RP AE+ E + Q+SS
Sbjct: 232 PEG-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 17 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 128
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 129 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 185
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 40/315 (12%)
Query: 52 EILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGT-GMVIA 110
E PN F+ A+ + + V+G G FG V G + PG + +A
Sbjct: 24 ETYEDPNRAVHQFAKELDAS-CIKIERVIGAGEFGEVCSGRL-------KLPGKRDVAVA 75
Query: 111 VKRLNQDGF--QGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENH 168
+K L G+ + +++L E + +GQ HPN+V L G ++V EFM G+L+
Sbjct: 76 IKTLKV-GYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAF 134
Query: 169 LFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDF 228
L + F + L+ G A G+ +L A+ ++RD NIL+++N K+SDF
Sbjct: 135 LRKHDGQFTVIQLVGMLR---GIAAGMRYL--ADMGYVHRDLAARNILVNSNLVCKVSDF 189
Query: 229 GLAK---DGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
GL++ D P + ++ + APE + T+ SDV+S+G+V+ E++S
Sbjct: 190 GLSRVIEDDPEAVYTTTGGKI--PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS---- 243
Query: 286 VDKNRPSGEHNLVEWAKPYL-ASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGK 344
GE +PY S + + + I+ ++ L L C E
Sbjct: 244 ------YGE-------RPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERA 290
Query: 345 FRPMMAEVVTVLEQL 359
RP ++V +L+++
Sbjct: 291 ERPKFEQIVGILDKM 305
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 22 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 133
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 134 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 190
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 16 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 127
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 128 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 184
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 129
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 130 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 186
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 23 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 134
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 135 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 191
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 24 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 135
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 136 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 192
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 152/330 (46%), Gaps = 42/330 (12%)
Query: 45 PTPR--SEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATK 102
P P+ +E P SF+ A+R + ++G G G V G +
Sbjct: 21 PEPQFYAEPHTYEEPGRAGRSFTREIEASR-IHIEKIIGSGDSGEVCYGRL-------RV 72
Query: 103 PGTGMV-IAVKRLNQDGF--QGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEF 159
PG V +A+K L + G+ + +++L+E + +GQ HPN+++L G ++V E+
Sbjct: 73 PGQRDVPVAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEY 131
Query: 160 MPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT 219
M GSL+ L F + L+ G G+ +L ++ ++RD N+L+D+
Sbjct: 132 MENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYL--SDLGYVHRDLAARNVLVDS 186
Query: 220 NYNAKLSDFGLAK---DGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVL 276
N K+SDFGL++ D P D ++ +T + APE +A ++ SDV+SFGVV+
Sbjct: 187 NLVCKVSDFGLSRVLEDDP--DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVM 244
Query: 277 LEMLSGRRAVDKNRPSGEHNLVEWAKPYL-ASKRKIFRIIDNRLEGQYTLEGAYKAATLA 335
E+L+ GE +PY + R + ++ + + L
Sbjct: 245 WEVLA----------YGE-------RPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLM 287
Query: 336 LRCLSTEGKFRPMMAEVVTVLEQLQDSSET 365
L C + RP +++V+VL+ L S E+
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVLDALIRSPES 317
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 129
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 130 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 186
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 36 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 147
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 148 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 204
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 129
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 130 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFWYAP 186
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 49 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 160
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 161 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 217
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 132
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 133 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 189
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 25 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 136
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 137 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 193
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 36 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 147
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 148 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 204
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 136/292 (46%), Gaps = 34/292 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 19 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q +S + L +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLA 183
Query: 260 TGHLTAKSDVYSFGVVLLEMLS-GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNR 318
+ KSDV++FGV+L E+ + G PS + L+E K +R+ R
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE----------KDYRM--ER 231
Query: 319 LEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQL-QDSSETGNIR 369
EG K L C RP AE+ E + Q+SS + +
Sbjct: 232 PEG-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 278
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q +S + L +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEI 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q +S + L +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEI 205
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 74 FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGT-GMVIAVKRLNQDGF--QGHKEWLAEVN 130
+ + V+G G FG V G + PG + +A+K L + G+ + +++L+E +
Sbjct: 16 IKIEKVIGVGEFGEVCSGRL-------KVPGKREICVAIKTL-KAGYTDKQRRDFLSEAS 67
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN++ L G + +++ E+M GSL+ L + F + L+ G
Sbjct: 68 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---G 124
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
G+ +L ++ ++RD NIL+++N K+SDFG+++ D P + ++
Sbjct: 125 IGSGMKYL--SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI- 181
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ APE +A T+ SDV+S+G+V+ E++S GE +PY
Sbjct: 182 -PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS----------YGE-------RPYWDM 223
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQL 359
S + + + I+ ++ L L C E RP ++V +L++L
Sbjct: 224 SNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 151/330 (45%), Gaps = 42/330 (12%)
Query: 45 PTPR--SEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATK 102
P P+ +E P SF+ A+R + ++G G G V G +
Sbjct: 21 PEPQFYAEPHTYEEPGRAGRSFTREIEASR-IHIEKIIGSGDSGEVCYGRL-------RV 72
Query: 103 PGTGMV-IAVKRLNQDGF--QGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEF 159
PG V +A+K L + G+ + +++L+E + +GQ HPN+++L G ++V E+
Sbjct: 73 PGQRDVPVAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEY 131
Query: 160 MPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT 219
M GSL+ L F + L+ G G+ +L ++ ++RD N+L+D+
Sbjct: 132 MENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYL--SDLGYVHRDLAARNVLVDS 186
Query: 220 NYNAKLSDFGLAK---DGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVL 276
N K+SDFGL++ D P D + +T + APE +A ++ SDV+SFGVV+
Sbjct: 187 NLVCKVSDFGLSRVLEDDP--DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVM 244
Query: 277 LEMLSGRRAVDKNRPSGEHNLVEWAKPYL-ASKRKIFRIIDNRLEGQYTLEGAYKAATLA 335
E+L+ GE +PY + R + ++ + + L
Sbjct: 245 WEVLA----------YGE-------RPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLM 287
Query: 336 LRCLSTEGKFRPMMAEVVTVLEQLQDSSET 365
L C + RP +++V+VL+ L S E+
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVLDALIRSPES 317
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q +S + L +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEI 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + L+ KG+ +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL---LQYTSQICKGMEY 132
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+RD T NIL++ K+ DFGL K P D+ + G + AP
Sbjct: 133 L--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 189
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q +S + L +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEI 205
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FGSV + + + TG V+AVK+L + +++ E+ L L H N
Sbjct: 19 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
+VK G C R L+ E++P GSL ++L + + L+ KG+ +
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 130
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT--YGYAAP 255
L + I+R+ T NIL++ K+ DFGL K P D+ + + G + AP
Sbjct: 131 L--GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFWYAP 187
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E L + SDV+SFGVVL E+ +
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 74 FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGT-GMVIAVKRLNQDGF--QGHKEWLAEVN 130
+ + V+G G FG V G + PG + +A+K L + G+ + +++L+E +
Sbjct: 10 IKIEKVIGVGEFGEVCSGRL-------KVPGKREICVAIKTL-KAGYTDKQRRDFLSEAS 61
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+GQ HPN++ L G + +++ E+M GSL+ L + F + L+ G
Sbjct: 62 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---G 118
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVM 247
G+ +L ++ ++RD NIL+++N K+SDFG+++ D P + ++
Sbjct: 119 IGSGMKYL--SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI- 175
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-A 306
+ APE +A T+ SDV+S+G+V+ E++S GE +PY
Sbjct: 176 -PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS----------YGE-------RPYWDM 217
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQL 359
S + + + I+ ++ L L C E RP ++V +L++L
Sbjct: 218 SNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q +S + L +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEI 205
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 25/208 (12%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+G+G FG V G G +AVK + D + +LAE + + QL H N
Sbjct: 201 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 247
Query: 140 LVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L+G +E+ L +V E+M +GSL ++L RG L + LK +L + + +L
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL 305
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGP-TGDQSHVSTRVMGTYGYAAPEY 257
G ++RD N+L+ + AK+SDFGL K+ T D + + + APE
Sbjct: 306 EG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEA 357
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRRA 285
L + KSDV+SFG++L E+ S R
Sbjct: 358 LREKKFSTKSDVWSFGILLWEIYSFGRV 385
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 25/204 (12%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+G+G FG V G + K +AVK + D + +LAE + + QL H N
Sbjct: 20 IGKGEFGDVMLG-----DYRGNK------VAVKCIKNDATA--QAFLAEASVMTQLRHSN 66
Query: 140 LVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L+G +E+ L +V E+M +GSL ++L RG L + LK +L + + +L
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYL 124
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGP-TGDQSHVSTRVMGTYGYAAPEY 257
G ++RD N+L+ + AK+SDFGL K+ T D + + + APE
Sbjct: 125 EG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEA 176
Query: 258 LATGHLTAKSDVYSFGVVLLEMLS 281
L + KSDV+SFG++L E+ S
Sbjct: 177 LREAAFSTKSDVWSFGILLWEIYS 200
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 25/204 (12%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+G+G FG V G G +AVK + D + +LAE + + QL H N
Sbjct: 14 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 60
Query: 140 LVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L+G +E+ L +V E+M +GSL ++L RG L + LK +L + + +L
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL 118
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGP-TGDQSHVSTRVMGTYGYAAPEY 257
G ++RD N+L+ + AK+SDFGL K+ T D + + + APE
Sbjct: 119 EG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEA 170
Query: 258 LATGHLTAKSDVYSFGVVLLEMLS 281
L + KSDV+SFG++L E+ S
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYS 194
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 25/204 (12%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+G+G FG V G G +AVK + D + +LAE + + QL H N
Sbjct: 29 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 75
Query: 140 LVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L+G +E+ L +V E+M +GSL ++L RG L + LK +L + + +L
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL 133
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGP-TGDQSHVSTRVMGTYGYAAPEY 257
G ++RD N+L+ + AK+SDFGL K+ T D + + + APE
Sbjct: 134 EG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEA 185
Query: 258 LATGHLTAKSDVYSFGVVLLEMLS 281
L + KSDV+SFG++L E+ S
Sbjct: 186 LREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 22 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 130 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 186
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 187 YNKFSIKSDVWAFGVLLWEI 206
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 137/290 (47%), Gaps = 39/290 (13%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGT-GMVIAVKRLNQDGF--QGHKEWLAEVNYLG 133
+ V+G G FG V G + PG + +A+K L + G+ + +++L E + +G
Sbjct: 27 ERVIGAGEFGEVCSGRL-------KLPGKRELPVAIKTL-KVGYTEKQRRDFLGEASIMG 78
Query: 134 QLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
Q HPN++ L G + ++V E+M GSL+ L + F + L+ G +
Sbjct: 79 QFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GISA 135
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---DGPTGDQSHVSTRVMGTY 250
G+ +L ++ ++RD NIL+++N K+SDFGL++ D P + ++
Sbjct: 136 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PI 191
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL-ASKR 309
+ APE +A T+ SDV+S+G+V+ E++S GE +PY + +
Sbjct: 192 RWTAPEAIAFRKFTSASDVWSYGIVMWEVVS----------YGE-------RPYWEMTNQ 234
Query: 310 KIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQL 359
+ + ++ ++ L L C E RP E+V +L++L
Sbjct: 235 DVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLYHP 138
LGEG FG V + + TG +AVK L + H + E+ L LYH
Sbjct: 29 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 139 NLVKLVGYCLED--DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
N+VK G C ED + L+ EF+P GSL+ +L + + ++ +LK A+ KG+
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICKGMD 140
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHV--STRVMGTYGYAA 254
+L + ++RD N+L+++ + K+ DFGL K T + R + Y A
Sbjct: 141 YL--GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-A 197
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE L SDV+SFGV L E+L+
Sbjct: 198 PECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 135/294 (45%), Gaps = 45/294 (15%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQ 134
+ V+G G FG V G + PG + + + G+ + +++L+E + +GQ
Sbjct: 12 EQVIGAGEFGEVCSGHL-------KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 64
Query: 135 LYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HPN++ L G + +++ EFM GSL++ L + F + L+ G A G
Sbjct: 65 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAG 121
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK--DGPTGDQSHVSTRVMG---T 249
+ +L A+ ++R NIL+++N K+SDFGL++ + T D ++ S +G
Sbjct: 122 MKYL--ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA--LGGKIP 177
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKR 309
+ APE + T+ SDV+S+G+V+ E++S GE +PY
Sbjct: 178 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS----------YGE-------RPYWDMTN 220
Query: 310 KIFRIIDNRLEGQYTLEGAYKAAT----LALRCLSTEGKFRPMMAEVVTVLEQL 359
+ + N +E Y L + L L C + RP ++V L+++
Sbjct: 221 Q---DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 27 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 76 LVRLYAVVTQEPI-YIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 187
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 23 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 71
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 72 LVRLYAVVTQEPI-YIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 129 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 183
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 190
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEI 210
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 30/225 (13%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNY 131
+ + V+GEG FG V K I K G M A+KR+ + + H+++ E+
Sbjct: 16 DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 68
Query: 132 LGQL-YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR------------GSYFQP 178
L +L +HPN++ L+G C + L E+ P G+L + L + S
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 179 LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD 238
LS L A A+G+ +L ++ + I+RD NIL+ NY AK++DFGL++ G
Sbjct: 129 LSSQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQ 182
Query: 239 QSHVSTRVMGTY--GYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ +V + MG + A E L T SDV+S+GV+L E++S
Sbjct: 183 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 29 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 77
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 78 LVRLYAVVTQEPI-YIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 135 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 189
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 30/225 (13%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNY 131
+ + V+GEG FG V K I K G M A+KR+ + + H+++ E+
Sbjct: 26 DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 132 LGQL-YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR------------GSYFQP 178
L +L +HPN++ L+G C + L E+ P G+L + L + S
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 179 LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD 238
LS L A A+G+ +L ++ + I+RD NIL+ NY AK++DFGL++ G
Sbjct: 139 LSSQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQ 192
Query: 239 QSHVSTRVMGTY--GYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ +V + MG + A E L T SDV+S+GV+L E++S
Sbjct: 193 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEI 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 181
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 70 LVRLYAVVTQEPI-YIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 181
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLYHP 138
LGEG FG V + + TG +AVK L + H + E+ L LYH
Sbjct: 17 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 139 NLVKLVGYCLED--DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
N+VK G C ED + L+ EF+P GSL+ +L + + ++ +LK A+ KG+
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICKGMD 128
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHV--STRVMGTYGYAA 254
+L + ++RD N+L+++ + K+ DFGL K T + R + Y A
Sbjct: 129 YL--GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-A 185
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE L SDV+SFGV L E+L+
Sbjct: 186 PECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 30 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 79 LVRLYAVVTQEPI-YIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 136 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 190
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 22 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 71 LVRLYAVVTQEPI-YIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 128 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 182
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 16 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 64
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 65 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 122 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 176
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 26 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 74
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 75 LVRLYAVVTQEPI-YIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 132 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 186
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 31 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 79
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 80 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 137 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 191
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 27 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 76 LVRLYAVVTQEPI-YIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 187
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEI 210
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 22 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 130 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLA 186
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 187 YNKFSIKSDVWAFGVLLWEI 206
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 181
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEI 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 25 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 74
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 133 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 189
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 190 YNKFSIKSDVWAFGVLLWEI 209
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 131 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLA 187
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 188 YNKFSIKSDVWAFGVLLWEI 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEI 210
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 131 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 188 YNKFSIKSDVWAFGVLLWEI 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 131 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 188 YNKFSIKSDVWAFGVLLWEI 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 34 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 83
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 142 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 198
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 199 YNKFSIKSDVWAFGVLLWEI 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+RD N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEI 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 228 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 277
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q +S + L +A + + +L
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+R+ N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 336 --KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 392
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 393 YNKFSIKSDVWAFGVLLWEI 412
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 15/231 (6%)
Query: 49 SEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMV 108
S G L + NL S + + LG G +G V+ G ++S +
Sbjct: 9 SSGVDLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYS---------LT 59
Query: 109 IAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENH 168
+AVK L +D + +E+L E + ++ HPNLV+L+G C + +V E+MP G+L ++
Sbjct: 60 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 169 LFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDF 228
L R + ++ + L +A + + +L + I+RD N L+ N+ K++DF
Sbjct: 119 L--RECNREEVTAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHVVKVADF 174
Query: 229 GLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEM 279
GL++ TGD + APE LA + KSDV++FGV+L E+
Sbjct: 175 GLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 54 LRSPNLKSFSFSDLKTATRNFRPDSV------LGEGGFGSVFKGWIDEHSFAATKPGTGM 107
LR+P + D + T+ +P+ V LGEG +GSV+K A TG
Sbjct: 7 LRNPPRRQLKKLDEDSLTK--QPEEVFDVLEKLGEGSYGSVYK---------AIHKETGQ 55
Query: 108 VIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLEN 167
++A+K++ + +E + E++ + Q P++VK G ++ +V E+ GS+ +
Sbjct: 56 IVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD 113
Query: 168 HLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSD 227
+ R + L+ + + KG+ +LH + I+RD K NILL+T +AKL+D
Sbjct: 114 IIRLRN---KTLTEDEIATILQSTLKGLEYLHF--MRKIHRDIKAGNILLNTEGHAKLAD 168
Query: 228 FGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
FG+A G D V+GT + APE + +D++S G+ +EM G+
Sbjct: 169 FGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 30/225 (13%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNY 131
+ + V+GEG FG V K I K G M A+KR+ + + H+++ E+
Sbjct: 23 DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 75
Query: 132 LGQL-YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR------------GSYFQP 178
L +L +HPN++ L+G C + L E+ P G+L + L + S
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 179 LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD 238
LS L A A+G+ +L ++ + I+R+ NIL+ NY AK++DFGL++ G
Sbjct: 136 LSSQQLLHFAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQ 189
Query: 239 QSHVSTRVMGTY--GYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ +V + MG + A E L T SDV+S+GV+L E++S
Sbjct: 190 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 17 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 65
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 66 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+R+ + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 123 --ERNYIHRNLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 177
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE---- 128
N + LG G FG V ++ +F K + +AVK L KE L
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF------QPLSWN 182
+++LGQ H N+V L+G C L++ E+ G L N L R+ +PL
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 160
Query: 183 LRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHV 242
L + A+G+AFL A I+RD N+LL + AK+ DFGLA+D V
Sbjct: 161 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 218
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+S+G++L E+ S
Sbjct: 219 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE---- 128
N + LG G FG V ++ +F K + +AVK L KE L
Sbjct: 39 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF------QPLSWN 182
+++LGQ H N+V L+G C L++ E+ G L N L R+ +PL
Sbjct: 95 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 152
Query: 183 LRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHV 242
L + A+G+AFL A I+RD N+LL + AK+ DFGLA+D V
Sbjct: 153 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 210
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+S+G++L E+ S
Sbjct: 211 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 106/206 (51%), Gaps = 14/206 (6%)
Query: 78 SVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQD-GFQGHKEWLAEVNYLGQL 135
VLG G FG+V+KG W+ E +A+K LN+ G + + E++ E + +
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIP------VAIKILNETTGPKANVEFMDEALIMASM 97
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
HP+LV+L+G CL +L V + MP G L ++ + L L + AKG+
Sbjct: 98 DHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDN---IGSQLLLNWCVQIAKGM 153
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAP 255
+L E ++++RD N+L+ + + K++DFGLA+ ++ + + + A
Sbjct: 154 MYLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 211
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E + T +SDV+S+GV + E+++
Sbjct: 212 ECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 267 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 316
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+R+ N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 375 --KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 431
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 432 YNKFSIKSDVWAFGVLLWEI 451
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G +G V++G ++S + +AVK L +D + +E+L E + ++ HPN
Sbjct: 225 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 274
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L+G C + ++ EFM G+L ++L R Q ++ + L +A + + +L
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ I+R+ N L+ N+ K++DFGL++ TGD + APE LA
Sbjct: 333 --KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 389
Query: 260 TGHLTAKSDVYSFGVVLLEM 279
+ KSDV++FGV+L E+
Sbjct: 390 YNKFSIKSDVWAFGVLLWEI 409
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 107/206 (51%), Gaps = 14/206 (6%)
Query: 78 SVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQD-GFQGHKEWLAEVNYLGQL 135
VLG G FG+V+KG W+ E + +A+K LN+ G + + E++ E + +
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGE------TVKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
HP+LV+L+G CL +L V + MP G L ++ + L L + AKG+
Sbjct: 75 DHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDN---IGSQLLLNWCVQIAKGM 130
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAP 255
+L E ++++RD N+L+ + + K++DFGLA+ ++ + + + A
Sbjct: 131 MYLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E + T +SDV+S+GV + E+++
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G G V+ G+ + H+ +AVK L Q G +LAE N + QL H
Sbjct: 21 LGAGQAGEVWMGYYNGHT----------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV+L ++ ++ E+M GSL + F + L+ N L +A A+G+AF+
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAAPEY 257
E I+RD + +NIL+ + K++DFGLA+ + + + R + + APE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDAEXTAREGAKFPIKWTAPEA 181
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ G T KSDV+SFG++L E+++ R
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 122/290 (42%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 73
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + +L H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 74 SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 251
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 252 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 122/290 (42%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 87
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + +L H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 88 SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 147
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 266 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 22/223 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE---- 128
N + LG G FG V ++ +F K + +AVK L KE L
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQP---------- 178
+++LGQ H N+V L+G C L++ E+ G L N L R+ +
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 179 LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD 238
LS L + A+G+AFL A I+RD N+LL + AK+ DFGLA+D
Sbjct: 161 LSTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 239 QSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
V + APE + T +SDV+S+G++L E+ S
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF---QGHKEWLAE 128
++ R LG+G FG V +G D S G + +AVK L D + +++ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
VN + L H NL++L G L ++ V E P GSL + L + +F + + + A
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 121
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+ A+G+ +L + I+RD N+LL T K+ DFGL + P D +V
Sbjct: 122 VQVAEGMGYLESK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 249 T-YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ + APE L T + SD + FGV L EM +
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF---QGHKEWLAE 128
++ R LG+G FG V +G D S G + +AVK L D + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
VN + L H NL++L G L ++ V E P GSL + L + +F + + + A
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 117
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+ A+G+ +L + I+RD N+LL T K+ DFGL + P D +V
Sbjct: 118 VQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 249 T-YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ + APE L T + SD + FGV L EM +
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF---QGHKEWLAE 128
++ R LG+G FG V +G D S G + +AVK L D + +++ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
VN + L H NL++L G L ++ V E P GSL + L + +F + + + A
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 127
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+ A+G+ +L + I+RD N+LL T K+ DFGL + P D +V
Sbjct: 128 VQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 249 T-YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ + APE L T + SD + FGV L EM +
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 39/291 (13%)
Query: 77 DSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQL 135
D V+G+G FG V+ G +ID+ A + ++ R+ + Q + +L E + L
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQ----AQNRIQCAIKSLSRITE--MQQVEAFLREGLLMRGL 79
Query: 136 YHPNLVKLVGYCLEDD---HRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
HPN++ L+G L + H LL Y M G L F R P +L + L A
Sbjct: 80 NHPNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQ--FIRSPQRNPTVKDL-ISFGLQVA 134
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD----QSHVSTRVMG 248
+G+ +L AE K ++RD N +LD ++ K++DFGLA+D + Q H R+
Sbjct: 135 RGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL-- 190
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASK 308
+ A E L T T KSDV+SFGV+L E+L+ R R +L +LA
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT--RGAPPYRHIDPFDLTH----FLAQG 244
Query: 309 RKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQL 359
R++ + +Y + Y+ +C + RP +V +EQ+
Sbjct: 245 RRL-------PQPEYCPDSLYQVMQ---QCWEADPAVRPTFRVLVGEVEQI 285
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 133/311 (42%), Gaps = 47/311 (15%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVN 130
+N LGEG FG V K +F +AVK L ++ ++ L+E N
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQP------------ 178
L Q+ HP+++KL G C +D LL+ E+ GSL L R P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSS 137
Query: 179 ---------LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFG 229
L+ + A ++G+ +L AE K+++RD NIL+ K+SDFG
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 230 LAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS-GRRAVDK 288
L++D D ++ + A E L T +SDV+SFGV+L E+++ G
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
Query: 289 NRPSGEHNLVEWAKPYLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPM 348
P NL L + ++ R DN E Y L L+C E RP+
Sbjct: 256 IPPERLFNL-------LKTGHRMER-PDNCSEEMY---------RLMLQCWKQEPDKRPV 298
Query: 349 MAEVVTVLEQL 359
A++ LE++
Sbjct: 299 FADISKDLEKM 309
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF---QGHKEWLAE 128
++ R LG+G FG V +G D S G + +AVK L D + +++ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
VN + L H NL++L G L ++ V E P GSL + L + +F + + + A
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 121
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+ A+G+ +L + I+RD N+LL T K+ DFGL + P D +V
Sbjct: 122 VQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 249 T-YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ + APE L T + SD + FGV L EM +
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG GG +V ++ E + K + R ++ K + EV+ QL H N
Sbjct: 19 LGGGGMSTV---YLAEDTILNIKVAIKAIFIPPREKEETL---KRFEREVHNSSQLSHQN 72
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V ++ EDD LV E++ +L ++ G PLS + + G+ H
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIK--H 126
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+ ++++RD K NIL+D+N K+ DFG+AK + + V+GT Y +PE A
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQ-A 184
Query: 260 TGHLTAK-SDVYSFGVVLLEMLSGR 283
G T + +D+YS G+VL EML G
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF---QGHKEWLAE 128
++ R LG+G FG V +G D S G + +AVK L D + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
VN + L H NL++L G L ++ V E P GSL + L + +F + + + A
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 117
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+ A+G+ +L + I+RD N+LL T K+ DFGL + P D +V
Sbjct: 118 VQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 249 T-YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ + APE L T + SD + FGV L EM +
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ E+ +G+L +L R S+++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE-WLAEVNYLGQL 135
+ +LGEG FG V++G H G + +AVK +D +KE +++E + L
Sbjct: 13 NRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 66
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
HP++VKL+G +E++ ++ E P G L ++L R + + L+ L +L K +
Sbjct: 67 DHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL---YSLQICKAM 122
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAP 255
A+L ++RD NIL+ + KL DFGL++ D S + + +P
Sbjct: 123 AYLES--INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSP 179
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E + T SDV+ F V + E+LS
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
LG+G FG V++G +P T +A+K +N+ + E+L E + + +
Sbjct: 18 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHL------FRRGSYFQPLSWNLRLKVALGAA 192
++V+L+G + L++ E M RG L+++L P S + +++A A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 134 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 191
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEM 279
+PE L G T SDV+SFGVVL E+
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE-WLAEVNYLGQL 135
+ +LGEG FG V++G H G + +AVK +D +KE +++E + L
Sbjct: 29 NRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 82
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
HP++VKL+G +E++ ++ E P G L ++L R + + L+ L +L K +
Sbjct: 83 DHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL---YSLQICKAM 138
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAP 255
A+L ++RD NIL+ + KL DFGL++ D S + + +P
Sbjct: 139 AYLES--INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSP 195
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E + T SDV+ F V + E+LS
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ E+ +G+L +L R S+++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 27/207 (13%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATK---PGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
LG G FG V+ ++H+ A K PG+ V A +LAE N + L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA--------------FLAEANVMKTLQ 68
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H LVKL + + ++ EFM +GSL + L QPL + + A+G+A
Sbjct: 69 HDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMA 125
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
F+ + I+RD + +NIL+ + K++DFGLA+ + + + R + + A
Sbjct: 126 FIE--QRNYIHRDLRAANILVSASLVCKIADFGLAR---VIEDNEYTAREGAKFPIKWTA 180
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE + G T KSDV+SFG++L+E+++
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 64
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + + H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 65 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 124
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 125 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 182
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 183 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 242
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 243 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP----------LSWNLRLK 186
N+V L+G C + L+V EF G+L +L + + F P L+ +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 153 YSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 72
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + + H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 132
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 251 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWL-AEVN 130
N VLG G FG V ++ ++ +K G + +AVK L + +E L +E+
Sbjct: 45 ENLEFGKVLGSGAFGKV----MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 131 YLGQL-YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQP----------- 178
+ QL H N+V L+G C L++E+ G L N+L + F
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 179 --------LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGL 230
L++ L A AKG+ FL ++RD N+L+ K+ DFGL
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGL 218
Query: 231 AKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
A+D + V + APE L G T KSDV+S+G++L E+ S
Sbjct: 219 ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF---QGHKEWLAE 128
++ R LG+G FG V +G D S G + +AVK L D + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
VN + L H NL++L G L ++ V E P GSL + L + +F + + + A
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 117
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+ A+G+ +L + I+RD N+LL T K+ DFGL + P D V
Sbjct: 118 VQVAEGMGYLESK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 175
Query: 249 T-YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ + APE L T + SD + FGV L EM +
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE-WLAEVNYLGQL 135
+ +LGEG FG V++G H G + +AVK +D +KE +++E + L
Sbjct: 17 NRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 70
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
HP++VKL+G +E++ ++ E P G L ++L R + + L+ L +L K +
Sbjct: 71 DHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL---YSLQICKAM 126
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAP 255
A+L ++RD NIL+ + KL DFGL++ D S + + +P
Sbjct: 127 AYLES--INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSP 183
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E + T SDV+ F V + E+LS
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 72
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + + H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPS 132
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 251 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP-----------LSWNLRL 185
N+V L+G C + L+V EF G+L +L + + F P L+ +
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
+ AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 152 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 133/311 (42%), Gaps = 47/311 (15%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVN 130
+N LGEG FG V K +F +AVK L ++ ++ L+E N
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQP------------ 178
L Q+ HP+++KL G C +D LL+ E+ GSL L R P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSS 137
Query: 179 ---------LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFG 229
L+ + A ++G+ +L AE K+++RD NIL+ K+SDFG
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 230 LAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS-GRRAVDK 288
L++D D ++ + A E L T +SDV+SFGV+L E+++ G
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
Query: 289 NRPSGEHNLVEWAKPYLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPM 348
P NL L + ++ R DN E Y L L+C E RP+
Sbjct: 256 IPPERLFNL-------LKTGHRMER-PDNCSEEMY---------RLMLQCWKQEPDKRPV 298
Query: 349 MAEVVTVLEQL 359
A++ LE++
Sbjct: 299 FADISKDLEKM 309
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 89
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + + H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 90 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 149
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 150 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 207
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 208 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 267
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 268 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 73
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + + H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 251
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 252 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 79
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + + H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 80 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 139
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 140 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 197
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 198 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 257
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 258 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF---QGHKEWLAE 128
++ R LG+G FG V +G D S G + +AVK L D + +++ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
VN + L H NL++L G L ++ V E P GSL + L + +F + + + A
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 127
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+ A+G+ +L + I+RD N+LL T K+ DFGL + P D V
Sbjct: 128 VQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 185
Query: 249 T-YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ + APE L T + SD + FGV L EM +
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 99
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + + H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 100 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 159
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 160 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 217
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 218 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 277
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 278 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
LG+G FG V++G +P T +A+K +N+ + E+L E + + +
Sbjct: 27 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHL------FRRGSYFQPLSWNLRLKVALGAA 192
++V+L+G + L++ E M RG L+++L P S + +++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 143 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 200
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEM 279
+PE L G T SDV+SFGVVL E+
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP------------LSWNLR 184
N+V L+G C + L+V EF G+L +L + + F P L+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
+ + AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 27/207 (13%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATK---PGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
LG G FG V+ ++H+ A K PG+ V A +LAE N + L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA--------------FLAEANVMKTLQ 241
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H LVKL + + ++ EFM +GSL + L QPL + + A+G+A
Sbjct: 242 HDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMA 298
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
F+ + I+RD + +NIL+ + K++DFGLA+ + + + R + + A
Sbjct: 299 FIE--QRNYIHRDLRAANILVSASLVCKIADFGLAR---VIEDNEYTAREGAKFPIKWTA 353
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE + G T KSDV+SFG++L+E+++
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP------------LSWNLR 184
N+V L+G C + L+V EF G+L +L + + F P L+
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
+ + AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP------------LSWNLR 184
N+V L+G C + L+V EF G+L +L + + F P L+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
+ + AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 73
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + + H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 192 QDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 251
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 252 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 87
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + + H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 88 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPS 147
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 266 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 90
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + + H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 91 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 150
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 151 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 208
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 209 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 268
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 269 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 43/292 (14%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
+G G FG+V+KG W H A K ++ V + FQ + EV L + H
Sbjct: 44 IGSGSFGTVYKGKW---HGDVAVK-----ILKVVDPTPEQFQAFRN---EVAVLRKTRHV 92
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
N++ +GY + D+ +V ++ SL HL + + FQ + +A A+G+ +L
Sbjct: 93 NILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL---IDIARQTAQGMDYL 148
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
H +I+RD K++NI L K+ DFGLA S + G+ + APE +
Sbjct: 149 HAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI 206
Query: 259 ATGH---LTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRII 315
+ +SDVYS+G+VL E+++G E ++ ++ +I ++
Sbjct: 207 RMQDNNPFSFQSDVYSYGIVLYELMTG----------------ELPYSHINNRDQIIFMV 250
Query: 316 DNRLEGQYTLEGAYKAATLALR-----CLSTEGKFRPMMAEVVTVLEQLQDS 362
R L YK A++ C+ + RP+ ++++ +E LQ S
Sbjct: 251 -GRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 33/205 (16%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATK---PGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
LG G FG V+ ++H+ A K PG+ V A +LAE N + L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA--------------FLAEANVMKTLQ 235
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H LVKL + + ++ EFM +GSL + L QPL + + A+G+A
Sbjct: 236 HDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMA 292
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
F+ + I+RD + +NIL+ + K++DFGLA+ G + APE
Sbjct: 293 FIE--QRNYIHRDLRAANILVSASLVCKIADFGLARVG-----------AKFPIKWTAPE 339
Query: 257 YLATGHLTAKSDVYSFGVVLLEMLS 281
+ G T KSDV+SFG++L+E+++
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 100/232 (43%), Gaps = 31/232 (13%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE---- 128
N + LG G FG V ++ +F K + +AVK L KE L
Sbjct: 32 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF------------ 176
+++LGQ H N+V L+G C L++ E+ G L N L R+
Sbjct: 88 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPE 145
Query: 177 -------QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFG 229
+PL L + A+G+AFL A I+RD N+LL + AK+ DFG
Sbjct: 146 GLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFG 203
Query: 230 LAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
LA+D V + APE + T +SDV+S+G++L E+ S
Sbjct: 204 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-D 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 58 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 113
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + + H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 114 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 173
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 174 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 291
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 292 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 89 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ E+ +G+L +L R S+++ +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N K++DFGLA+D D +T
Sbjct: 207 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 60 KSFSFSDLKTATR-NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQD- 117
K+ S SDLK R N LG G FG V++G + S P + + +AVK L +
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVY 87
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFR-RGSYF 176
Q ++L E + + H N+V+ +G L+ R ++ E M G L++ L R
Sbjct: 88 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 147
Query: 177 QPLSWNLR--LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLA 231
QP S + L VA A G +L E I+RD N LL AK+ DFG+A
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS---------- 281
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
Query: 282 -----------GRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLE 320
GR KN P + ++ + R F II R+E
Sbjct: 266 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVNYLGQLY 136
+LGEG FGSV +G + + GT + +AVK +L+ + +E+L+E +
Sbjct: 41 ILGEGEFGSVMEGNLKQED------GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 137 HPNLVKLVGYCLEDDHR-----LLVYEFMPRGSLENHL----FRRGSYFQPLSWNLRLKV 187
HPN+++L+G C+E + +++ FM G L +L G PL L+ V
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+ A G+ +L + ++RD N +L + ++DFGL+K +GD
Sbjct: 155 DI--ALGMEYL--SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEM 279
+ A E LA T+KSDV++FGV + E+
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 22/223 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE---- 128
N + LG G FG V ++ +F K + +AVK L KE L
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQP---------- 178
+++LGQ H N+V L+G C L++ E+ G L N L R+ +
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 179 LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD 238
S L + A+G+AFL A I+RD N+LL + AK+ DFGLA+D
Sbjct: 161 ASTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 239 QSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
V + APE + T +SDV+S+G++L E+ S
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
+GEG FG VF+ +P T ++AVK L ++ + ++ E + + +P
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ--------------------- 177
N+VKL+G C L++E+M G L N R S
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 178 PLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTG 237
PLS +L +A A G+A+L +E K ++RD T N L+ N K++DFGL+++ +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 238 DQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
D + PE + T +SDV+++GVVL E+ S
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ E+ +G+L +L R S+++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP------------LSWNLR 184
N+V L+G C + L+V EF G+L +L + + F P L+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
+ + AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ E+ +G+L +L R S+++ +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP--------LSWNLRLKVA 188
N+V L+G C + L+V EF G+L +L + + F P L+ + +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 151 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ E+ +G+L +L R S+++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP--------LSWNLRLKVA 188
N+V L+G C + L+V EF G+L +L + + F P L+ + +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 151 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 132/311 (42%), Gaps = 47/311 (15%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVN 130
+N LGEG FG V K +F +AVK L ++ ++ L+E N
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQP------------ 178
L Q+ HP+++KL G C +D LL+ E+ GSL L R P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSS 137
Query: 179 ---------LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFG 229
L+ + A ++G+ +L AE +++RD NIL+ K+SDFG
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL--AEMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 230 LAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS-GRRAVDK 288
L++D D ++ + A E L T +SDV+SFGV+L E+++ G
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
Query: 289 NRPSGEHNLVEWAKPYLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPM 348
P NL L + ++ R DN E Y L L+C E RP+
Sbjct: 256 IPPERLFNL-------LKTGHRMER-PDNCSEEMY---------RLMLQCWKQEPDKRPV 298
Query: 349 MAEVVTVLEQL 359
A++ LE++
Sbjct: 299 FADISKDLEKM 309
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ E+ +G+L +L R S+++ +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N K++DFGLA+D D +T
Sbjct: 148 SCTYQLARGMEYL--ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ E+ +G+L +L R S+++ +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 35 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ E+ +G+L +L R S+++ +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N K++DFGLA+D D +T
Sbjct: 153 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP------------LSWNLR 184
N+V L+G C + L+V EF G+L +L + + F P L+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
+ + AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ E+ +G+L +L R S+++ +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N K++DFGLA+D D +T
Sbjct: 150 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 15/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNY 131
R+ + S LG+G FGSV + + TG ++AVK+L G +++ E+
Sbjct: 11 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 132 LGQLYHPNLVKL--VGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
L L+ +VK V Y LV E++P G L + L R + L + L +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSS 122
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT 249
KG+ +L + ++RD NIL+++ + K++DFGLAK P D+ + R G
Sbjct: 123 QICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQ 179
Query: 250 YG--YAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L+ + +SDV+SFGVVL E+ +
Sbjct: 180 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE---- 128
N + LG G FG V ++ +F K + +AVK L KE L
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRG------SYF------ 176
+++LGQ H N+V L+G C L++ E+ G L N L R+ SY
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPE 160
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT 236
+ LS L + A+G+AFL A I+RD N+LL + AK+ DFGLA+D
Sbjct: 161 EQLSSRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 237 GDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
V + APE + T +SDV+S+G++L E+ S
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 15/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNY 131
R+ + S LG+G FGSV + + TG ++AVK+L G +++ E+
Sbjct: 10 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 132 LGQLYHPNLVKL--VGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
L L+ +VK V Y LV E++P G L + L R + L + L +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSS 121
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT 249
KG+ +L + ++RD NIL+++ + K++DFGLAK P D+ + R G
Sbjct: 122 QICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQ 178
Query: 250 YG--YAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L+ + +SDV+SFGVVL E+ +
Sbjct: 179 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP------------LSWNLR 184
N+V L+G C + L+V EF G+L +L + + F P L+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
+ + AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 15/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNY 131
R+ + S LG+G FGSV + + TG ++AVK+L G +++ E+
Sbjct: 23 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 132 LGQLYHPNLVKL--VGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
L L+ +VK V Y LV E++P G L + L R + L + L +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSS 134
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT 249
KG+ +L + ++RD NIL+++ + K++DFGLAK P D+ + R G
Sbjct: 135 QICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQ 191
Query: 250 --YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L+ + +SDV+SFGVVL E+ +
Sbjct: 192 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP +AVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGS-----YFQP-------LSWNLRL 185
N++ L+G C +D ++ E+ +G+L +L R F P LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV+L E+ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP------------LSWNLR 184
N+V L+G C + L+V EF G+L +L + + F P L+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
+ + AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
LG+G FG V++G +P T +A+K +N+ + E+L E + + +
Sbjct: 26 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHL------FRRGSYFQPLSWNLRLKVALGAA 192
++V+L+G + L++ E M RG L+++L P S + +++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 142 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEM 279
+PE L G T SDV+SFGVVL E+
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ E+ +G+L +L R S+++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N +++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP------------LSWNLR 184
N+V L+G C + L+V EF G+L +L + + F P L+
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
+ + AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 153 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
LG+G FG V++G +P T +A+K +N+ + E+L E + + +
Sbjct: 33 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHL------FRRGSYFQPLSWNLRLKVALGAA 192
++V+L+G + L++ E M RG L+++L P S + +++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 149 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 206
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEM 279
+PE L G T SDV+SFGVVL E+
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ S++ F S + L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSY 109
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 110 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ S++ F S + L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSY 111
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V I+ +F K T +AVK L + H+ ++E+ L + +H
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYFQP------------LSWNLR 184
N+V L+G C + L+V EF G+L +L + + F P L+
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
+ + AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 188 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
LG+G FG V++G +P T +A+K +N+ + E+L E + + +
Sbjct: 26 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHL------FRRGSYFQPLSWNLRLKVALGAA 192
++V+L+G + L++ E M RG L+++L P S + +++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 142 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEM 279
+PE L G T SDV+SFGVVL E+
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 15/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNY 131
R+ + S LG+G FGSV + + TG ++AVK+L G +++ E+
Sbjct: 7 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 132 LGQLYHPNLVKL--VGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
L L+ +VK V Y LV E++P G L + L R + L + L +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSS 118
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT 249
KG+ +L + ++RD NIL+++ + K++DFGLAK P D+ R G
Sbjct: 119 QICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDXXVVREPGQ 175
Query: 250 YG--YAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L+ + +SDV+SFGVVL E+ +
Sbjct: 176 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
LG+G FG V++G +P T +A+K +N+ + E+L E + + +
Sbjct: 24 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHL------FRRGSYFQPLSWNLRLKVALGAA 192
++V+L+G + L++ E M RG L+++L P S + +++A A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 140 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEM 279
+PE L G T SDV+SFGVVL E+
Sbjct: 198 MSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
D LG G FG+V KG+ + + I N + E LAE N + QL
Sbjct: 374 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 428
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
+P +V+++G C E + +LV E G L +L + L +V++G +
Sbjct: 429 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 483
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
+L E+ ++RD N+LL T + AK+SDFGL+K D+++ + G + + A
Sbjct: 484 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 540
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE + ++KSDV+SFGV++ E S
Sbjct: 541 PECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
D LG G FG+V KG+ + + I N + E LAE N + QL
Sbjct: 375 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 429
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
+P +V+++G C E + +LV E G L +L + L +V++G +
Sbjct: 430 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 484
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
+L E+ ++RD N+LL T + AK+SDFGL+K D+++ + G + + A
Sbjct: 485 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 541
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE + ++KSDV+SFGV++ E S
Sbjct: 542 PECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 19/242 (7%)
Query: 51 GEILRSPNLKSFSFSDL------KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPG 104
G + S N + FS +D+ + A LG+G FG V++G +P
Sbjct: 20 GVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPE 77
Query: 105 TGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRG 163
T +A+K +N+ + E+L E + + + ++V+L+G + L++ E M RG
Sbjct: 78 TR--VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 135
Query: 164 SLENHL------FRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILL 217
L+++L P S + +++A A G+A+L+ K ++RD N ++
Sbjct: 136 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMV 193
Query: 218 DTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLL 277
++ K+ DFG+ +D D + + + +PE L G T SDV+SFGVVL
Sbjct: 194 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 253
Query: 278 EM 279
E+
Sbjct: 254 EI 255
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
D LG G FG+V KG+ + + I N + E LAE N + QL
Sbjct: 30 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 84
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
+P +V+++G C E + +LV E G L +L + L +V++G +
Sbjct: 85 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 139
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
+L E+ ++RD N+LL T + AK+SDFGL+K D+++ + G + + A
Sbjct: 140 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 196
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE + ++KSDV+SFGV++ E S
Sbjct: 197 PECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
LG+G FG V++G +P T +A+K +N+ + E+L E + + +
Sbjct: 20 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHL------FRRGSYFQPLSWNLRLKVALGAA 192
++V+L+G + L++ E M RG L+++L P S + +++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 136 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEM 279
+PE L G T SDV+SFGVVL E+
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
LG+G FG V++G +P T +A+K +N+ + E+L E + + +
Sbjct: 27 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHL------FRRGSYFQPLSWNLRLKVALGAA 192
++V+L+G + L++ E M RG L+++L P S + +++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 143 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 200
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEM 279
+PE L G T SDV+SFGVVL E+
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ S++ F S + L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 111
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
D LG G FG+V KG+ + + I N + E LAE N + QL
Sbjct: 32 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 86
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
+P +V+++G C E + +LV E G L +L + L +V++G +
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 141
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
+L E+ ++RD N+LL T + AK+SDFGL+K D+++ + G + + A
Sbjct: 142 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 198
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE + ++KSDV+SFGV++ E S
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
D LG G FG+V KG+ + + I N + E LAE N + QL
Sbjct: 32 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 86
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
+P +V+++G C E + +LV E G L +L + L +V++G +
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 141
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
+L E+ ++RD N+LL T + AK+SDFGL+K D+++ + G + + A
Sbjct: 142 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 198
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE + ++KSDV+SFGV++ E S
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
LG+G FG V++G +P T +A+K +N+ + E+L E + + +
Sbjct: 33 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHL------FRRGSYFQPLSWNLRLKVALGAA 192
++V+L+G + L++ E M RG L+++L P S + +++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 149 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 206
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEM 279
+PE L G T SDV+SFGVVL E+
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ S++ F S + L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 110
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 111 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
D LG G FG+V KG+ + + I N + E LAE N + QL
Sbjct: 22 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 76
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
+P +V+++G C E + +LV E G L +L + L +V++G +
Sbjct: 77 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 131
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
+L E+ ++RD N+LL T + AK+SDFGL+K D+++ + G + + A
Sbjct: 132 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 188
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE + ++KSDV+SFGV++ E S
Sbjct: 189 PECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
LG+G FG V++G +P T +A+K +N+ + E+L E + + +
Sbjct: 23 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHL------FRRGSYFQPLSWNLRLKVALGAA 192
++V+L+G + L++ E M RG L+++L P S + +++A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 139 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 196
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEM 279
+PE L G T SDV+SFGVVL E+
Sbjct: 197 MSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 25/206 (12%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
LG G FG V G W ++ +AVK + ++G E+ E + +L HP
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-----------VAVKMI-KEGSMSEDEFFQEAQTMMKLSHP 63
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LVK G C ++ +V E++ G L N+L G +P + L++ +G+AFL
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFL 120
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT---YGYAAP 255
+ I+RD N L+D + K+SDFG+ + D +VS+ +GT ++AP
Sbjct: 121 ESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTR--YVLDDQYVSS--VGTKFPVKWSAP 174
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS 281
E ++KSDV++FG+++ E+ S
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
D LG G FG+V KG+ + + I N + E LAE N + QL
Sbjct: 10 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 64
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
+P +V+++G C E + +LV E G L +L + L +V++G +
Sbjct: 65 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 119
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
+L E+ ++RD N+LL T + AK+SDFGL+K D+++ + G + + A
Sbjct: 120 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 176
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE + ++KSDV+SFGV++ E S
Sbjct: 177 PECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
D LG G FG+V KG+ + + I N + E LAE N + QL
Sbjct: 16 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 70
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
+P +V+++G C E + +LV E G L +L + L +V++G +
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 125
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
+L E+ ++RD N+LL T + AK+SDFGL+K D+++ + G + + A
Sbjct: 126 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 182
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE + ++KSDV+SFGV++ E S
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLA-EV 129
+F+ ++LG+G F V++ A TG+ +A+K +++ G + + EV
Sbjct: 12 DFKVGNLLGKGSFAGVYR---------AESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
QL HP++++L Y + ++ LV E G + +L R +P S N
Sbjct: 63 KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR---VKPFSENEARHFMH 119
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT 249
G+ +LH +++RD SN+LL N N K++DFGLA + H + + GT
Sbjct: 120 QIITGMLYLHSH--GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGT 175
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWA 301
Y +PE +SDV+S G + +L GR D + N V A
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
D LG G FG+V KG+ + + I N + E LAE N + QL
Sbjct: 12 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 66
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
+P +V+++G C E + +LV E G L +L + L +V++G +
Sbjct: 67 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 121
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
+L E+ ++RD N+LL T + AK+SDFGL+K D+++ + G + + A
Sbjct: 122 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 178
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE + ++KSDV+SFGV++ E S
Sbjct: 179 PECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ + +G+L +L R S+++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 27/242 (11%)
Query: 49 SEGEILRSPNLKSFSFSDLKTATRNFRPDSV------LGEGGFGSVFKGWIDEHSFAATK 102
S G L + NL S + TR+ P+ LG+G FG V+K A
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYK---------AQN 58
Query: 103 PGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPR 162
T ++ A K ++ + ++++ E++ L HPN+VKL+ +++ ++ EF
Sbjct: 59 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 163 GSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN 222
G+++ + +PL+ + V + +LH + K+I+RD K NIL + +
Sbjct: 119 GAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGD 173
Query: 223 AKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGH-----LTAKSDVYSFGVVLL 277
KL+DFG++ Q S +GT + APE + K+DV+S G+ L+
Sbjct: 174 IKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 278 EM 279
EM
Sbjct: 232 EM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 27/242 (11%)
Query: 49 SEGEILRSPNLKSFSFSDLKTATRNFRPDSV------LGEGGFGSVFKGWIDEHSFAATK 102
S G L + NL S + TR+ P+ LG+G FG V+K A
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYK---------AQN 58
Query: 103 PGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPR 162
T ++ A K ++ + ++++ E++ L HPN+VKL+ +++ ++ EF
Sbjct: 59 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 163 GSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN 222
G+++ + +PL+ + V + +LH + K+I+RD K NIL + +
Sbjct: 119 GAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGD 173
Query: 223 AKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGH-----LTAKSDVYSFGVVLL 277
KL+DFG++ Q S +GT + APE + K+DV+S G+ L+
Sbjct: 174 IKLADFGVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 278 EM 279
EM
Sbjct: 232 EM 233
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
LG+G FG V++G +P T +A+K +N+ + E+L E + + +
Sbjct: 20 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHL------FRRGSYFQPLSWNLRLKVALGAA 192
++V+L+G + L++ E M RG L+++L P S + +++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N + ++ K+ DFG+ +D D + + +
Sbjct: 136 DGMAYLNA--NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEM 279
+PE L G T SDV+SFGVVL E+
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 20/214 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVN 130
R VLG G FG+V KG WI E + + +K + ++ G Q + +
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGE------SIKIPVCIKVIEDKSGRQSFQAVTDHML 85
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQP---LSWNLRLKV 187
+G L H ++V+L+G C +L V +++P GSL +H+ + P L+W +++
Sbjct: 86 AIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI-- 142
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
AKG+ +L E +++R+ N+LL + +++DFG+A P D+ + +
Sbjct: 143 ----AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 196
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + G T +SDV+S+GV + E+++
Sbjct: 197 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 73
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L++ + MP G L +++ GS + L+W +++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 130
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 131 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 36 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 82
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY + +V ++ SL +HL + F+ + + +A A+G+
Sbjct: 83 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 138
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA + SH ++ G+ + APE
Sbjct: 139 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 196
Query: 257 YLATGH---LTAKSDVYSFGVVLLEMLSGR 283
+ + +SDVY+FG+VL E+++G+
Sbjct: 197 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
D LG G FG+V KG+ + + I N + E LAE N + QL
Sbjct: 16 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 70
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
+P +V+++G C E + +LV E G L +L + L +V++G +
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 125
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
+L E+ ++RD N+LL T + AK+SDFGL+K D++ + G + + A
Sbjct: 126 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYA 182
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLS 281
PE + ++KSDV+SFGV++ E S
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 109
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ G T +
Sbjct: 110 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEV 165
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ G T + T
Sbjct: 111 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L++ + MP G L +++ GS + L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 127 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 70
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L++ + MP G L +++ GS + L+W +++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 127
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 128 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY + +V ++ SL +HL + F+ + + +A A+G+
Sbjct: 63 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMD 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA + SH ++ G+ + APE
Sbjct: 119 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
Query: 257 YLATGH---LTAKSDVYSFGVVLLEMLSGR 283
+ + +SDVY+FG+VL E+++G+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ G T + T
Sbjct: 112 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ G T + T
Sbjct: 112 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ G T + T
Sbjct: 111 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP +AVK L D + + ++E+ + + H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGS-----YFQP-------LSWNLRL 185
N++ L+G C +D ++ E+ +G+L +L R + P LS +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 139 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV+L E+ +
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY + +V ++ SL +HL + F+ + + +A A+G+
Sbjct: 91 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 146
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA + SH ++ G+ + APE
Sbjct: 147 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 204
Query: 257 YLATGH---LTAKSDVYSFGVVLLEMLSGR 283
+ + +SDVY+FG+VL E+++G+
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 8 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 58
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 115
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ G T + T
Sbjct: 116 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 171
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 72
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L++ + MP G L +++ GS + L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 129
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 130 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 20/214 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVN 130
R VLG G FG+V KG WI E + + +K + ++ G Q + +
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGE------SIKIPVCIKVIEDKSGRQSFQAVTDHML 67
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQP---LSWNLRLKV 187
+G L H ++V+L+G C +L V +++P GSL +H+ + P L+W +++
Sbjct: 68 AIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI-- 124
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
AKG+ +L E +++R+ N+LL + +++DFG+A P D+ + +
Sbjct: 125 ----AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 178
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + G T +SDV+S+GV + E+++
Sbjct: 179 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L++ + MP G L +++ GS + L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 128
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 129 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY + +V ++ SL +HL + F+ + +A A+G+
Sbjct: 79 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFE---MKKLIDIARQTARGMD 134
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA + SH ++ G+ + APE
Sbjct: 135 YLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 257 YLA---TGHLTAKSDVYSFGVVLLEMLSGR 283
+ + + +SDVY+FG+VL E+++G+
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP +AVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRG------SY------FQPLSWNLRL 185
N++ L+G C +D ++ E+ +G+L +L R SY + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV+L E+ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP +AVK L D + + ++E+ + + H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRG------SY------FQPLSWNLRL 185
N++ L+G C +D ++ E+ +G+L +L R SY + LS +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 147 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV+L E+ +
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP +AVK L D + + ++E+ + + H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRG------SY------FQPLSWNLRL 185
N++ L+G C +D ++ E+ +G+L +L R SY + LS +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 146 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV+L E+ +
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 11 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 61
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 118
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ G T + T
Sbjct: 119 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 174
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP +AVK L D + + ++E+ + + H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRG------SY------FQPLSWNLRL 185
N++ L+G C +D ++ E+ +G+L +L R SY + LS +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 143 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV+L E+ +
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 79
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 136
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 137 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEVNYLGQL 135
VLG+G FG V A + GT + A+K L +D + + E L L
Sbjct: 26 VLGKGSFGKVM---------LADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 136 YHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
P + + C + RL V E++ G L H+ + G + +P + ++++G
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG---- 132
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR-VMGTYGYA 253
+ FLH + +IYRD K N++LD+ + K++DFG+ K+ V+TR GT Y
Sbjct: 133 LFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM---DGVTTREFCGTPDYI 187
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVD 287
APE +A D +++GV+L EML+G+ D
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP +AVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRG------SY------FQPLSWNLRL 185
N++ L+G C +D ++ E+ +G+L +L R SY + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV+L E+ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ G T + T
Sbjct: 112 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 127 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 70
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L++ + MP G L +++ GS + L+W +++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYL-LNWCVQI- 127
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 128 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 72
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 129
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 130 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 72
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 129
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 130 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP + +AVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR------------L 185
N++ L+G C +D ++ + +G+L +L R S+++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A+G+ +L A K I+RD N+L+ N K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 75
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 132
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 133 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 72
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 129
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 130 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 127 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 128
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 129 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 11 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 61
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 118
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ G T + T
Sbjct: 119 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 174
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP +AVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGS-----YFQP-------LSWNLRL 185
N++ L+G C +D ++ E+ +G+L +L R + P LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV+L E+ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 76
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 133
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 134 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 117/259 (45%), Gaps = 29/259 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
N++ LGEG FG V + H+ K +I K L + QG E E++YL
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALK-IINKKVLAKSDMQGRIE--REISYL 68
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
L HP+++KL D ++V E+ N LF +S +
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQII 123
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
V + H K+++RD K N+LLD + N K++DFGL+ G+ S G+ Y
Sbjct: 124 SAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 178
Query: 253 AAPEYLATGHLTA--KSDVYSFGVVLLEMLSGRRAVD--------KNRPSGEHNLVEWAK 302
AAPE + +G L A + DV+S GV+L ML R D KN +G + L ++
Sbjct: 179 AAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLS 237
Query: 303 PYLASKRKIFRIID--NRL 319
P A K I++ NR+
Sbjct: 238 PGAAGLIKRMLIVNPLNRI 256
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 117/259 (45%), Gaps = 29/259 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
N++ LGEG FG V + H+ K +I K L + QG E E++YL
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALK-IINKKVLAKSDMQGRIE--REISYL 67
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
L HP+++KL D ++V E+ N LF +S +
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQII 122
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
V + H K+++RD K N+LLD + N K++DFGL+ G+ S G+ Y
Sbjct: 123 SAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 177
Query: 253 AAPEYLATGHLTA--KSDVYSFGVVLLEMLSGRRAVD--------KNRPSGEHNLVEWAK 302
AAPE + +G L A + DV+S GV+L ML R D KN +G + L ++
Sbjct: 178 AAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLS 236
Query: 303 PYLASKRKIFRIID--NRL 319
P A K I++ NR+
Sbjct: 237 PGAAGLIKRMLIVNPLNRI 255
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 63
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 120
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 121 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ L++ F S + L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKD--FMDASALTGIPLPLIKSY 108
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 27/242 (11%)
Query: 49 SEGEILRSPNLKSFSFSDLKTATRNFRPDSV------LGEGGFGSVFKGWIDEHSFAATK 102
S G L + NL S + TR+ P+ LG+G FG V+K A
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYK---------AQN 58
Query: 103 PGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPR 162
T ++ A K ++ + ++++ E++ L HPN+VKL+ +++ ++ EF
Sbjct: 59 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 163 GSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN 222
G+++ + +PL+ + V + +LH + K+I+RD K NIL + +
Sbjct: 119 GAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGD 173
Query: 223 AKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGH-----LTAKSDVYSFGVVLL 277
KL+DFG++ Q +GT + APE + K+DV+S G+ L+
Sbjct: 174 IKLADFGVSAKNTRXIQRR--DXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 278 EM 279
EM
Sbjct: 232 EM 233
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 109/241 (45%), Gaps = 27/241 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
N++ LGEG FG V + H+ K +I K L + QG E E++YL
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALK-IINKKVLAKSDMQGRIE--REISYL 58
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
L HP+++KL D ++V E+ N LF +S +
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQII 113
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
V + H K+++RD K N+LLD + N K++DFGL+ G+ S G+ Y
Sbjct: 114 SAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 168
Query: 253 AAPEYLATGHLTA--KSDVYSFGVVLLEMLSGRRAVD--------KNRPSGEHNLVEWAK 302
AAPE + +G L A + DV+S GV+L ML R D KN +G + L ++
Sbjct: 169 AAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLS 227
Query: 303 P 303
P
Sbjct: 228 P 228
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 94
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 151
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 152 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY +V ++ SL +HL + F+ + +A A+G+
Sbjct: 79 HVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFE---MKKLIDIARQTARGMD 134
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA + SH ++ G+ + APE
Sbjct: 135 YLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 257 YLA---TGHLTAKSDVYSFGVVLLEMLSGR 283
+ + + +SDVY+FG+VL E+++G+
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 126/294 (42%), Gaps = 47/294 (15%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDG-FQGHKEWLAEVNYLGQLYHP 138
LG+G FG V++G ++ K +AVK +N+ + E+L E + +
Sbjct: 22 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ------PLSWNLRLKVALGAA 192
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 138 DGMAYLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
APE L G T SD++SFGVVL E+ S L E +PY
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQG------ 232
Query: 313 RIIDNRLEGQYTLEGAY---------KAATLALRCLSTEGKFRPMMAEVVTVLE 357
+ N ++ ++G Y + L C K RP E+V +L+
Sbjct: 233 --LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 117/259 (45%), Gaps = 29/259 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
N++ LGEG FG V + H+ K +I K L + QG E E++YL
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALK-IINKKVLAKSDMQGRIE--REISYL 62
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
L HP+++KL D ++V E+ N LF +S +
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
V + H K+++RD K N+LLD + N K++DFGL+ G+ S G+ Y
Sbjct: 118 SAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 172
Query: 253 AAPEYLATGHLTA--KSDVYSFGVVLLEMLSGRRAVD--------KNRPSGEHNLVEWAK 302
AAPE + +G L A + DV+S GV+L ML R D KN +G + L ++
Sbjct: 173 AAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLS 231
Query: 303 PYLASKRKIFRIID--NRL 319
P A K I++ NR+
Sbjct: 232 PGAAGLIKRMLIVNPLNRI 250
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 127 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 19/212 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNY 131
+F S LG G G VFK + KP +G+V+A K ++ + + + E+
Sbjct: 10 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L + P +V G D + E M GSL+ L + G + + KV++
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 116
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
KG+ +L + K+++RD K SNIL+++ KL DFG++ G D+ ++ +GT
Sbjct: 117 IKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEFVGTRS 171
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
Y +PE L H + +SD++S G+ L+EM GR
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 126/294 (42%), Gaps = 47/294 (15%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDG-FQGHKEWLAEVNYLGQLYHP 138
LG+G FG V++G ++ K +AVK +N+ + E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ------PLSWNLRLKVALGAA 192
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 141 DGMAYLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
APE L G T SD++SFGVVL E+ S L E +PY
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQG------ 235
Query: 313 RIIDNRLEGQYTLEGAY---------KAATLALRCLSTEGKFRPMMAEVVTVLE 357
+ N ++ ++G Y + L C K RP E+V +L+
Sbjct: 236 --LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSY 111
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL-YH 137
LGEG FG V + KP +AVK L D + + ++E+ + + H
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRG------SYF------QPLSWNLRL 185
N++ L+G C +D ++ E+ +G+L +L R SY + LS +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 195 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L T +SDV+SFGV+L E+ +
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 109
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 110 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 111
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 110
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 111 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G++F H +V++RD K N+L++T KL+DFGLA+ G T + T
Sbjct: 112 LLQGLSFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 109
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 110 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 110
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 111 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 69 TATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW-LA 127
+++ F+ LG G + +V+KG TG+ +A+K + D +G +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKG---------LNKTTGVYVALKEVKLDSEEGTPSTAIR 52
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR--GSYFQPLSWNLRL 185
E++ + +L H N+V+L ++ LV+EFM L+ ++ R G+ + L NL
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
+G+AF H E K+++RD K N+L++ KL DFGLA+ G + +
Sbjct: 112 YFQWQLLQGLAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLAR--AFGIPVNTFSS 167
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
+ T Y AP+ L + S D++S G +L EM++G+
Sbjct: 168 EVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 110
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 111 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V T
Sbjct: 111 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 166
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNY 131
+F S LG G G VFK + KP +G+V+A K ++ + + + E+
Sbjct: 69 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 119
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L + P +V G D + E M GSL+ L + G + + KV++
Sbjct: 120 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 175
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
KG+ +L + K+++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 176 IKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 230
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y +PE L H + +SD++S G+ L+EM GR +
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 55
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 112
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 113 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 169
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 170 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V T
Sbjct: 111 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 166
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 111
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 43 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 89
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY + +V ++ SL +HL + F+ + + +A A+G+
Sbjct: 90 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 145
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 146 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
Query: 257 YLATGH---LTAKSDVYSFGVVLLEMLSGR 283
+ + +SDVY+FG+VL E+++G+
Sbjct: 204 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 20 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 66
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY + +V ++ SL +HL + F+ + +A A+G+
Sbjct: 67 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFE---MKKLIDIARQTARGMD 122
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 123 YLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 180
Query: 257 YLA---TGHLTAKSDVYSFGVVLLEMLSGR 283
+ + + +SDVY+FG+VL E+++G+
Sbjct: 181 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 5 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 55
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 112
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V T
Sbjct: 113 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 168
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNY 131
+F S LG G G VFK + KP +G+V+A K ++ + + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L + P +V G D + E M GSL+ L + G + + KV++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 113
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
KG+ +L + K+++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 114 IKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y +PE L H + +SD++S G+ L+EM GR +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY + +V ++ SL +HL + F+ + + +A A+G+
Sbjct: 91 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 146
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 147 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
Query: 257 YLATGH---LTAKSDVYSFGVVLLEMLSGR 283
+ + +SDVY+FG+VL E+++G+
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 18 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 64
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY + +V ++ SL +HL + F+ + + +A A+G+
Sbjct: 65 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMD 120
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 121 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
Query: 257 YLATGH---LTAKSDVYSFGVVLLEMLSGR 283
+ + +SDVY+FG+VL E+++G+
Sbjct: 179 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF----QGHKEWLAEVNYLGQ 134
VLG+GG+G VF+ T TG + A+K L + + AE N L +
Sbjct: 24 VLGKGGYGKVFQ------VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 135 LYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLS--WNLRLKVALGA 191
+ HP +V L+ Y + +L L+ E++ G L L R G + + + + + +ALG
Sbjct: 78 VKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG- 135
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
H + +IYRD K NI+L+ + KL+DFGL K+ + V+ GT
Sbjct: 136 -------HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE--SIHDGTVTHXFCGTIE 186
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
Y APE L D +S G ++ +ML+G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY + +V ++ SL +HL + F+ + + +A A+G+
Sbjct: 68 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMD 123
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 124 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 257 YLATGH---LTAKSDVYSFGVVLLEMLSGR 283
+ + +SDVY+FG+VL E+++G+
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY + +V ++ SL +HL + F+ + + +A A+G+
Sbjct: 63 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMD 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 119 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 257 YLATGH---LTAKSDVYSFGVVLLEMLSGR 283
+ + +SDVY+FG+VL E+++G+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQD-GFQGHKEWLAEVN 130
R VLG G FG+V+KG WI + + +A+K L ++ + +KE L E
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGE------NVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLF----RRGSYFQPLSWNLRLK 186
+ + P + +L+G CL +L V + MP G L +H+ R GS L+W +++
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQ-DLLNWCMQI- 128
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+++L + ++++RD N+L+ + + K++DFGLA+ + + +
Sbjct: 129 -----AKGMSYLE--DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGG 181
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 182 KVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY + +V ++ SL +HL + F+ + + +A A+G+
Sbjct: 68 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMD 123
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 124 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 257 YLATGH---LTAKSDVYSFGVVLLEMLSGR 283
+ + +SDVY+FG+VL E+++G+
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF----QGHKEWLAEVNYLGQ 134
VLG+GG+G VF+ T TG + A+K L + + AE N L +
Sbjct: 24 VLGKGGYGKVFQ------VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 135 LYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLS--WNLRLKVALGA 191
+ HP +V L+ Y + +L L+ E++ G L L R G + + + + + +ALG
Sbjct: 78 VKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG- 135
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
H + +IYRD K NI+L+ + KL+DFGL K+ + V+ GT
Sbjct: 136 -------HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE--SIHDGTVTHTFCGTIE 186
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
Y APE L D +S G ++ +ML+G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNY 131
+F S LG G G VFK + KP +G+V+A K ++ + + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L + P +V G D + E M GSL+ L + G + + KV++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 113
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
KG+ +L + K+++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 114 IKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y +PE L H + +SD++S G+ L+EM GR +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE----VNYLGQL 135
LG G FG V ++ ++ K M +AVK L +E L ++YLG
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 101
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF--------------QPLSW 181
H N+V L+G C L++ E+ G L N L R+ F L
Sbjct: 102 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 182 NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH 241
L + AKG+AFL A I+RD NILL K+ DFGLA+D
Sbjct: 161 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
V + APE + T +SDV+S+G+ L E+ S
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNY 131
+F S LG G G VFK + KP +G+V+A K ++ + + + E+
Sbjct: 34 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 84
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L + P +V G D + E M GSL+ L + G + + KV++
Sbjct: 85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 140
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
KG+ +L + K+++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 141 IKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 195
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y +PE L H + +SD++S G+ L+EM GR +
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE----VNYLGQL 135
LG G FG V ++ ++ K M +AVK L +E L ++YLG
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 85
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF--------------QPLSW 181
H N+V L+G C L++ E+ G L N L R+ F L
Sbjct: 86 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 182 NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH 241
L + AKG+AFL A I+RD NILL K+ DFGLA+D
Sbjct: 145 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
V + APE + T +SDV+S+G+ L E+ S
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE----VNYLGQL 135
LG G FG V ++ ++ K M +AVK L +E L ++YLG
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 103
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF--------------QPLSW 181
H N+V L+G C L++ E+ G L N L R+ F L
Sbjct: 104 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 182 NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH 241
L + AKG+AFL A I+RD NILL K+ DFGLA+D
Sbjct: 163 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
V + APE + T +SDV+S+G+ L E+ S
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+ RL+ + + E++
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALXKIRLDTETEGVPSTAIREIS 54
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ G T + T
Sbjct: 112 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+ RL+ + + E++
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALXKIRLDTETEGVPSTAIREIS 53
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ G T + T
Sbjct: 111 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 66
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 123
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
A+G+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 124 -----AEGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNY 131
+F S LG G G VFK + KP +G+V+A K ++ + + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L + P +V G D + E M GSL+ L + G + + KV++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 113
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
KG+ +L + K+++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 114 IKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y +PE L H + +SD++S G+ L+EM GR +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNY 131
+F S LG G G VFK + KP +G+V+A K ++ + + + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L + P +V G D + E M GSL+ L + G + + KV++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 113
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
KG+ +L + K+++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 114 IKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y +PE L H + +SD++S G+ L+EM GR +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNY 131
+F S LG G G VFK + KP +G+V+A K ++ + + + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L + P +V G D + E M GSL+ L + G + + KV++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 113
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
KG+ +L + K+++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 114 IKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y +PE L H + +SD++S G+ L+EM GR +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 30/224 (13%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQ------- 120
K +F VLG+G FG VF T+P +G + A+K L + +
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFL------VRKVTRPDSGHLYAMKVLKKATLKVRDRVRT 77
Query: 121 -GHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQP 178
++ LA+VN HP +VKL Y + + +L L+ +F+ G L L + + +
Sbjct: 78 KMERDILADVN------HPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE 130
Query: 179 LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD 238
+++ +A A G+ LH +IYRD K NILLD + KL+DFGL+K+ D
Sbjct: 131 ---DVKFYLA-ELALGLDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--D 182
Query: 239 QSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + +D +S+GV++ EML+G
Sbjct: 183 HEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDG-FQGHKEWLAEVNYLGQLYHP 138
LG+G FG V++G ++ K +AVK +N+ + E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ------PLSWNLRLKVALGAA 192
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 141 DGMAYLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
APE L G T SD++SFGVVL E+ S
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+ L + + +KE L E
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIMELREATSPKANKEILDEAY 103
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 160
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 161 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 29/215 (13%)
Query: 77 DSVLGE----GGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNY 131
D VLGE G FG VF G + ++AVK + K ++L E
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLR---------ADNTLVAVKSCRETLPPDLKAKFLQEARI 165
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL-- 189
L Q HPN+V+L+G C + +V E + G L G+ LR+K L
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-------RLRVKTLLQM 218
Query: 190 --GAAKGVAFLHGAETK-VIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AA G+ +L E+K I+RD N L+ K+SDFG++++ G +
Sbjct: 219 VGDAAAGMEYL---ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLR 275
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L G +++SDV+SFG++L E S
Sbjct: 276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATK---PGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
LG G FG V+ G+ + + A K PGT V A +L E N + L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA--------------FLEEANLMKTLQ 65
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR--GSYFQPLSWNLRLKVALGAAKG 194
H LV+L +++ ++ EFM +GSL + L G P + ++ A+G
Sbjct: 66 HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI----AEG 121
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GY 252
+A++ I+RD + +N+L+ + K++DFGLA+ + + + R + +
Sbjct: 122 MAYIE--RKNYIHRDLRAANVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKW 176
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLS-------GRRAVD--------------KNRP 291
APE + G T KS+V+SFG++L E+++ GR D +N P
Sbjct: 177 TAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCP 236
Query: 292 SGEHNLVEWAKPYLASKRKIFRIIDNRLEGQYT-LEGAYK 330
+++++ A +R F + + L+ YT EG Y+
Sbjct: 237 DELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQ 276
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VL G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 76
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L++ + MP G L +++ GS + L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 133
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 134 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 32/240 (13%)
Query: 55 RSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL 114
RSP+L + + + R LG GGFG V + WI + TG +A+K+
Sbjct: 4 RSPSLPTQTCGPWEMKER-------LGTGGFGYVLR-WIHQ--------DTGEQVAIKQC 47
Query: 115 NQDGFQGHKE-WLAEVNYLGQLYHPNLVKL------VGYCLEDDHRLLVYEFMPRGSLEN 167
Q+ ++E W E+ + +L HPN+V + +D LL E+ G L
Sbjct: 48 RQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRK 107
Query: 168 HLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLD---TNYNAK 224
+L + + +R ++ + + +LH E ++I+RD K NI+L K
Sbjct: 108 YLNQFENCCGLKEGPIRTLLS-DISSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHK 164
Query: 225 LSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ D G AK+ DQ + T +GT Y APE L T D +SFG + E ++G R
Sbjct: 165 IIDLGYAKEL---DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 32/240 (13%)
Query: 55 RSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL 114
RSP+L + + + R LG GGFG V + WI + TG +A+K+
Sbjct: 5 RSPSLPTQTCGPWEMKER-------LGTGGFGYVLR-WIHQ--------DTGEQVAIKQC 48
Query: 115 NQDGFQGHKE-WLAEVNYLGQLYHPNLVKL------VGYCLEDDHRLLVYEFMPRGSLEN 167
Q+ ++E W E+ + +L HPN+V + +D LL E+ G L
Sbjct: 49 RQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRK 108
Query: 168 HLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLD---TNYNAK 224
+L + + +R ++ + + +LH E ++I+RD K NI+L K
Sbjct: 109 YLNQFENCCGLKEGPIRTLLS-DISSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHK 165
Query: 225 LSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ D G AK+ DQ + T +GT Y APE L T D +SFG + E ++G R
Sbjct: 166 IIDLGYAKEL---DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE----VNYLGQL 135
LG G FG V ++ ++ K M +AVK L +E L ++YLG
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF--------------QPLSW 181
H N+V L+G C L++ E+ G L N L R+ F L
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 182 NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH 241
L + AKG+AFL A I+RD NILL K+ DFGLA+D
Sbjct: 168 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
V + APE + T +SDV+S+G+ L E+ S
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 73
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L++ + MP G L +++ GS + L+W +++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 130
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFG AK ++ + +
Sbjct: 131 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 126/280 (45%), Gaps = 52/280 (18%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATK---PGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
LG G FG V+ G+ + + A K PGT V A +L E N + L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA--------------FLEEANLMKTLQ 66
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR--GSYFQPLSWNLRLKVALGAAKG 194
H LV+L ++ ++ E+M +GSL + L G P + ++A +G
Sbjct: 67 HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA----EG 122
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GY 252
+A++ I+RD + +N+L+ + K++DFGLA+ + + + R + +
Sbjct: 123 MAYIE--RKNYIHRDLRAANVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKW 177
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLS-------GRRAVD--------------KNRP 291
APE + G T KSDV+SFG++L E+++ GR D +N P
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCP 237
Query: 292 SGEHNLVEWAKPYLASKRKIFRIIDNRLEGQYT-LEGAYK 330
+++++ A +R F + + L+ YT EG Y+
Sbjct: 238 DELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQ 277
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VL G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 127 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L++ + MP G L +++ GS + L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 128
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFG AK ++ + +
Sbjct: 129 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGF--QGHKEWLAEVNYLGQLY 136
+G G FG+V+KG W + +AVK LN Q + + EV L +
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ +GY +V ++ SL +HL + F+ + + +A A+G+
Sbjct: 63 HVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMD 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LH +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 119 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 257 YLATGH---LTAKSDVYSFGVVLLEMLSGR 283
+ + +SDVY+FG+VL E+++G+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG--HKEWLAEVNYLGQLYH 137
+GEG +G V+K K G ++A+KR+ D + E++ L +L+H
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL-GAAKGVA 196
PN+V L+ + LV+EFM + L+ L + Q + ++K+ L +GVA
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ----DSQIKIYLYQLLRGVA 133
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
H + ++++RD K N+L++++ KL+DFGLA+ +S+ T + T Y AP+
Sbjct: 134 HCH--QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPD 189
Query: 257 YL-ATGHLTAKSDVYSFGVVLLEMLSGR 283
L + + D++S G + EM++G+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L++ + MP G L +++ GS + L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 128
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFG AK ++ + +
Sbjct: 129 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 19/212 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNY 131
+F S LG G G VFK + KP +G+V+A K ++ + + + E+
Sbjct: 26 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 76
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L + P +V G D + E M GSL+ L + G + + KV++
Sbjct: 77 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 132
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
KG+ +L + K+++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 133 IKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 187
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
Y +PE L H + +SD++S G+ L+EM GR
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VL G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 76
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 133
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFGLAK ++ + +
Sbjct: 134 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 29/215 (13%)
Query: 77 DSVLGE----GGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNY 131
D VLGE G FG VF G + ++AVK + K ++L E
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLR---------ADNTLVAVKSCRETLPPDLKAKFLQEARI 165
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL-- 189
L Q HPN+V+L+G C + +V E + G L G+ LR+K L
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-------RLRVKTLLQM 218
Query: 190 --GAAKGVAFLHGAETK-VIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AA G+ +L E+K I+RD N L+ K+SDFG++++ G +
Sbjct: 219 VGDAAAGMEYL---ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLR 275
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE L G +++SDV+SFG++L E S
Sbjct: 276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 120/277 (43%), Gaps = 40/277 (14%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-QDGFQGHKEWLAEVNYLGQLYHP 138
+G+G FG VFKG ID T V+A+K ++ ++ ++ E+ L Q P
Sbjct: 30 IGKGSFGEVFKG-IDNR--------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
+ K G L+D ++ E++ GS + L G PL + KG+ +L
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG----PLDETQIATILREILKGLDYL 135
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
H K I+RD K +N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 136 HSE--KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 191
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNR 318
+K+D++S G+ +E+ G P E L + +F I N
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGE------PPHSE----------LHPMKVLFLIPKN- 234
Query: 319 LEGQYTLEGAYKA--ATLALRCLSTEGKFRPMMAEVV 353
TLEG Y CL+ E FRP E++
Sbjct: 235 --NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 269
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG--HKEWLAEVNYLGQLYH 137
+GEG +G V+K K G ++A+KR+ D + E++ L +L+H
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL-GAAKGVA 196
PN+V L+ + LV+EFM + L+ L + Q + ++K+ L +GVA
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ----DSQIKIYLYQLLRGVA 133
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
H + ++++RD K N+L++++ KL+DFGLA+ +S+ T + T Y AP+
Sbjct: 134 HCH--QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPD 189
Query: 257 YL-ATGHLTAKSDVYSFGVVLLEMLSGR 283
L + + D++S G + EM++G+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 128
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFG AK ++ + +
Sbjct: 129 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFG AK ++ + +
Sbjct: 127 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVN 130
F+ VLG G FG+V+KG WI E + +A+K L + + +KE L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 76
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRR----GSYFQPLSWNLRLK 186
+ + +P++ +L+G CL +L+ + MP G L +++ GS + L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 133
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
AKG+ +L + ++++RD N+L+ T + K++DFG AK ++ + +
Sbjct: 134 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ A E + T +SDV+S+GV + E+++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 70 ATRNFRPDS---VLGE-GGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW 125
TR+ P+ ++GE G FG V+K A T ++ A K ++ + +++
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYK---------AQNKETSVLAAAKVIDTKSEEELEDY 54
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
+ E++ L HPN+VKL+ +++ ++ EF G+++ + +PL+ +
Sbjct: 55 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQ 111
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGL-AKDGPTGDQSHVST 244
V + +LH + K+I+RD K NIL + + KL+DFG+ AK+ T Q S
Sbjct: 112 VVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS- 168
Query: 245 RVMGTYGYAAPEYLATGH-----LTAKSDVYSFGVVLLEM 279
+GT + APE + K+DV+S G+ L+EM
Sbjct: 169 -FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 126/294 (42%), Gaps = 47/294 (15%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDG-FQGHKEWLAEVNYLGQLYHP 138
LG+G FG V++G ++ K +AVK +N+ + E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ------PLSWNLRLKVALGAA 192
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 141 DGMAYLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
APE L G T SD++SFGVVL E+ S L E +PY
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQG------ 235
Query: 313 RIIDNRLEGQYTLEGAY---------KAATLALRCLSTEGKFRPMMAEVVTVLE 357
+ N ++ ++G Y + L C K RP E+V +L+
Sbjct: 236 --LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLAEVN 130
NF+ +GEG +G V+K A TG V+A+K RL+ + + E++
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L +L HPN+VKL+ ++ LV+E + + + F S + L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+AF H +V++RD K N+L++T KL+DFGLA+ G T + T
Sbjct: 111 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L + + D++S G + EM++ RRA+
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ PRG + L + + + + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 122 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 171
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 222
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 223 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 260
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 67
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +GSL + F +G + L + +A A
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 125 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEXTARQGAKFPI 179
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 120/277 (43%), Gaps = 40/277 (14%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-QDGFQGHKEWLAEVNYLGQLYHP 138
+G+G FG VFKG ID T V+A+K ++ ++ ++ E+ L Q P
Sbjct: 15 IGKGSFGEVFKG-IDNR--------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
+ K G L+D ++ E++ GS + L G PL + KG+ +L
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG----PLDETQIATILREILKGLDYL 120
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
H K I+RD K +N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 121 HSE--KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVI 176
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNR 318
+K+D++S G+ +E+ G P E L + +F I N
Sbjct: 177 KQSAYDSKADIWSLGITAIELARG------EPPHSE----------LHPMKVLFLIPKN- 219
Query: 319 LEGQYTLEGAYKA--ATLALRCLSTEGKFRPMMAEVV 353
TLEG Y CL+ E FRP E++
Sbjct: 220 --NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 126/294 (42%), Gaps = 47/294 (15%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDG-FQGHKEWLAEVNYLGQLYHP 138
LG+G FG V++G ++ K +AVK +N+ + E+L E + +
Sbjct: 24 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ------PLSWNLRLKVALGAA 192
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D D + + +
Sbjct: 140 DGMAYLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
APE L G T SD++SFGVVL E+ S L E +PY
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQG------ 234
Query: 313 RIIDNRLEGQYTLEGAY---------KAATLALRCLSTEGKFRPMMAEVVTVLE 357
+ N ++ ++G Y + L C K RP E+V +L+
Sbjct: 235 --LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 120/277 (43%), Gaps = 40/277 (14%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-QDGFQGHKEWLAEVNYLGQLYHP 138
+G+G FG VFKG ID T V+A+K ++ ++ ++ E+ L Q P
Sbjct: 15 IGKGSFGEVFKG-IDNR--------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
+ K G L+D ++ E++ GS + L G PL + KG+ +L
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG----PLDETQIATILREILKGLDYL 120
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
H K I+RD K +N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 121 HSE--KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 176
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNR 318
+K+D++S G+ +E+ G P E L + +F I N
Sbjct: 177 KQSAYDSKADIWSLGITAIELARG------EPPHSE----------LHPMKVLFLIPKN- 219
Query: 319 LEGQYTLEGAYKA--ATLALRCLSTEGKFRPMMAEVV 353
TLEG Y CL+ E FRP E++
Sbjct: 220 --NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 120/277 (43%), Gaps = 40/277 (14%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-QDGFQGHKEWLAEVNYLGQLYHP 138
+G+G FG VFKG ID T V+A+K ++ ++ ++ E+ L Q P
Sbjct: 35 IGKGSFGEVFKG-IDNR--------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 85
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
+ K G L+D ++ E++ GS + L G PL + KG+ +L
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG----PLDETQIATILREILKGLDYL 140
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
H K I+RD K +N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 141 HSE--KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVI 196
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNR 318
+K+D++S G+ +E+ G P E L + +F I N
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGE------PPHSE----------LHPMKVLFLIPKN- 239
Query: 319 LEGQYTLEGAYKA--ATLALRCLSTEGKFRPMMAEVV 353
TLEG Y CL+ E FRP E++
Sbjct: 240 --NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 274
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 95/228 (41%), Gaps = 35/228 (15%)
Query: 67 LKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW- 125
+K +F +LG+G FG VF A T A+K L +D +
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVF---------LAEFKKTNQFFAIKALKKDVVLMDDDVE 63
Query: 126 --LAEVNYLGQLY-HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHL-------FRRGSY 175
+ E L + HP L + ++ V E++ G L H+ R ++
Sbjct: 64 CTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF 123
Query: 176 FQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGP 235
+ A G+ FLH ++YRD K NILLD + + K++DFG+ K+
Sbjct: 124 Y-----------AAEIILGLQFLHSK--GIVYRDLKLDNILLDKDGHIKIADFGMCKENM 170
Query: 236 TGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
GD + GT Y APE L D +SFGV+L EML G+
Sbjct: 171 LGDAK--TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 9 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 57
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +GSL + F +G + L + +A A
Sbjct: 58 KKLRHEKLVQLYA-VVSEEPIXIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIA 114
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 115 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEXTARQGAKFPI 169
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 170 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 204
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 67
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +GSL + F +G + L + +A A
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 125 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 179
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 72 RNFRPDSV------LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW 125
R+ P+ V LG+G FG V+K A TG + A K + + +++
Sbjct: 13 RDLDPNEVWEIVGELGDGAFGKVYK---------AKNKETGALAAAKVIETKSEEELEDY 63
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
+ E+ L HP +VKL+G D ++ EF P G+++ + +
Sbjct: 64 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC 123
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
+ L A + FLH ++I+RD K N+L+ + +L+DFG++ Q S
Sbjct: 124 RQMLEA---LNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS-- 176
Query: 246 VMGTYGYAAPEYLATGHLTA-----KSDVYSFGVVLLEM 279
+GT + APE + + K+D++S G+ L+EM
Sbjct: 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 10 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 58
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +GSL + F +G + L + +A A
Sbjct: 59 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIA 115
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 116 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 170
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 205
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 8 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 56
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +GSL + F +G + L + +A A
Sbjct: 57 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIA 113
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 114 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 168
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 169 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 203
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 67
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +GSL + F +G + L + +A A
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 125 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 179
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 72 RNFRPDSV------LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW 125
R+ P+ V LG+G FG V+K A TG + A K + + +++
Sbjct: 5 RDLDPNEVWEIVGELGDGAFGKVYK---------AKNKETGALAAAKVIETKSEEELEDY 55
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
+ E+ L HP +VKL+G D ++ EF P G+++ + +
Sbjct: 56 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC 115
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
+ L A + FLH ++I+RD K N+L+ + +L+DFG++ Q S
Sbjct: 116 RQMLEA---LNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS-- 168
Query: 246 VMGTYGYAAPEYLATGHLTA-----KSDVYSFGVVLLEM 279
+GT + APE + + K+D++S G+ L+EM
Sbjct: 169 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 21/231 (9%)
Query: 57 PNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ 116
P + + + + R + LG+G FG V+ G T GT V A+K L +
Sbjct: 169 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-K 217
Query: 117 DGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF 176
G + +L E + +L H LV+L + ++ +V E+M +GSL + F +G
Sbjct: 218 PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGETG 274
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT 236
+ L + +A A G+A++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---L 329
Query: 237 GDQSHVSTRVMGTY--GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ + + R + + APE G T KSDV+SFG++L E+ + R
Sbjct: 330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 12 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 60
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +GSL + F +G + L + +A A
Sbjct: 61 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIA 117
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 118 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 172
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 173 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 207
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG--HKEWLAEVNYLGQLYH 137
LGE FG V+KG H F +A+K L +D +G +E+ E +L H
Sbjct: 34 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQH 88
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRG---------------SYFQPLSWN 182
PN+V L+G +D +++ + G L L R S +P +
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF- 147
Query: 183 LRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHV 242
+ + A G+ +L + V+++D T N+L+ N K+SD GL ++ D +
Sbjct: 148 --VHLVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 203
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ + APE + G + SD++S+GVVL E+ S
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 67
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +GSL + F +G + L + +A A
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 125 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 179
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 21/230 (9%)
Query: 57 PNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ 116
P + + + + R + LG+G FG V+ G T GT V A+K L +
Sbjct: 252 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-K 300
Query: 117 DGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF 176
G + +L E + +L H LV+L + ++ +V E+M +GSL + F +G
Sbjct: 301 PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGETG 357
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT 236
+ L + +A A G+A++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 358 KYLRLPQLVDMAAQIASGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---L 412
Query: 237 GDQSHVSTRVMGTY--GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRR 284
+ + + R + + APE G T KSDV+SFG++L E+ + R
Sbjct: 413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 21/231 (9%)
Query: 57 PNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ 116
P + + + + R + LG+G FG V+ G T GT V A+K L +
Sbjct: 169 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-K 217
Query: 117 DGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF 176
G + +L E + +L H LV+L + ++ +V E+M +GSL + F +G
Sbjct: 218 PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGETG 274
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT 236
+ L + +A A G+A++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---L 329
Query: 237 GDQSHVSTRVMGTY--GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ + + R + + APE G T KSDV+SFG++L E+ + R
Sbjct: 330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVK--RLNQDGFQGHKEWLA 127
+ NF+ +GEG +G V+K A TG V+A+K RL+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E++ L +L HPN+VKL+ ++ LV+E + + + F S + L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKK---FMDASALTGIPLPLIKSY 111
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+G+AF H +V++RD K N+L++T KL+DFGLA+ +++ V
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 248 GTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
T Y APE L + + D++S G + EM++ RRA+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG--HKEWLAEVNYLGQLYH 137
LGE FG V+KG H F +A+K L +D +G +E+ E +L H
Sbjct: 17 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQH 71
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRG---------------SYFQPLSWN 182
PN+V L+G +D +++ + G L L R S +P +
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF- 130
Query: 183 LRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHV 242
+ + A G+ +L + V+++D T N+L+ N K+SD GL ++ D +
Sbjct: 131 --VHLVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 186
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ + APE + G + SD++S+GVVL E+ S
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 24/222 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVNY 131
+F+ S+LGEG +G V +AT TG ++A+K++ D L E+
Sbjct: 12 DFQLKSLLGEGAYGVVC---------SATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L H N++ + D ++ + ++ L R S Q LS +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQT 121
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---------DGPTGDQSHV 242
+ V LHG + VI+RD K SN+L+++N + K+ DFGLA+ PTG QS +
Sbjct: 122 LRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 243 STRVMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
T + T Y APE + T +++ DV+S G +L E+ R
Sbjct: 180 -TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 29/232 (12%)
Query: 54 LRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKR 113
L+ P++ F D + F +G G FG+V+ A V+A+K+
Sbjct: 38 LKDPDVAELFFKD--DPEKLFSDLREIGHGSFGAVY---------FARDVRNSEVVAIKK 86
Query: 114 LNQDGFQGHKEW---LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLF 170
++ G Q +++W + EV +L +L HPN ++ G L + LV E+ GS + L
Sbjct: 87 MSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL- 144
Query: 171 RRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGL 230
+ +PL V GA +G+A+LH +I+RD K NILL KL DFG
Sbjct: 145 --EVHKKPLQEVEIAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGS 200
Query: 231 AKDGPTGDQSHVSTRVMGTYGYAAPEYLAT---GHLTAKSDVYSFGVVLLEM 279
A + +GT + APE + G K DV+S G+ +E+
Sbjct: 201 ASIMAPANX------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 21/231 (9%)
Query: 57 PNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ 116
P + + + + R + LG+G FG V+ G T GT V A+K L +
Sbjct: 169 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-K 217
Query: 117 DGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF 176
G + +L E + +L H LV+L + ++ +V E+M +GSL + F +G
Sbjct: 218 PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLD--FLKGETG 274
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT 236
+ L + +A A G+A++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---L 329
Query: 237 GDQSHVSTRVMGTY--GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ + + R + + APE G T KSDV+SFG++L E+ + R
Sbjct: 330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 42/278 (15%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-QDGFQGHKEWLAEVNYLGQLYHP 138
+G+G FG V+KG ID H T V+A+K ++ ++ ++ E+ L Q P
Sbjct: 27 IGKGSFGEVYKG-IDNH--------TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
+ + G L+ ++ E++ GS + L + G PL + KG+ +L
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPG----PLEETYIATILREILKGLDYL 132
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
H + I+RD K +N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 133 HSE--RKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 188
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNR 318
K+D++S G+ +E+ G P+ + L R +F I N
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKG------EPPNSD----------LHPMRVLFLIPKNS 232
Query: 319 ---LEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
LEGQ++ +K A CL+ + +FRP E++
Sbjct: 233 PPTLEGQHS--KPFKEFVEA--CLNKDPRFRPTAKELL 266
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL--NQDGFQGHKEWLAEVNYLGQLY 136
++GEG +G V K TG ++A+K+ + D K + E+ L QL
Sbjct: 32 LVGEGSYGMVMK---------CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLEN-HLFRRGSYFQPLSWNLRLKVALGAAKGV 195
H NLV L+ C + LV+EF+ L++ LF G L + + K G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGI 137
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAP 255
F H +I+RD K NIL+ + KL DFG A+ V + T Y AP
Sbjct: 138 GFCHS--HNIIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAP 193
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSG 282
E L K+ DV++ G ++ EM G
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 67
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
++ H LV+L + ++ +V E+M +GSL + F +G + L + +A A
Sbjct: 68 KKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 125 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 179
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 129/314 (41%), Gaps = 40/314 (12%)
Query: 43 VPPTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATK 102
+P P + E + K+ + A +F LG+G FG+V+ A +
Sbjct: 5 LPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVY---------LARE 55
Query: 103 PGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEF 159
+ ++A+K L + + + EV L HPN+++L GY + L+ E+
Sbjct: 56 KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 115
Query: 160 MPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT 219
P G++ L + + + + ++ A +++ H +VI+RD K N+LL +
Sbjct: 116 APLGTVYRELQKLSKFDEQRTATYITEL----ANALSYCHS--KRVIHRDIKPENLLLGS 169
Query: 220 NYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEM 279
K++DFG + P+ + T + GT Y PE + K D++S GV+ E
Sbjct: 170 AGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 225
Query: 280 LSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCL 339
L G+ + N + + Y R F D EG A L R L
Sbjct: 226 LVGKPPFEAN---------TYQETYKRISRVEFTFPDFVTEG---------ARDLISRLL 267
Query: 340 STEGKFRPMMAEVV 353
RPM+ EV+
Sbjct: 268 KHNPSQRPMLREVL 281
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 24/222 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEVNY 131
+F+ S+LGEG +G V +AT TG ++A+K++ D L E+
Sbjct: 12 DFQLKSLLGEGAYGVVC---------SATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L H N++ + D ++ + ++ L R S Q LS +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQT 121
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---------DGPTGDQSHV 242
+ V LHG + VI+RD K SN+L+++N + K+ DFGLA+ PTG QS +
Sbjct: 122 LRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 243 STRVMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
T + T Y APE + T +++ DV+S G +L E+ R
Sbjct: 180 -TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNY 131
+FR VLG G F V A T ++A+K + ++ +G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVI---------LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L ++ HPN+V L H L+ + + G L + + +G Y + + L +V
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL--- 126
Query: 192 AKGVAFLHGAETKVIYRDFKTSNIL---LDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
V +LH + +++RD K N+L LD + +SDFGL+K D V + G
Sbjct: 127 -DAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
T GY APE LA + D +S GV+ +L G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 67
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +G L + F +G + L + +A A
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLD--FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 125 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 179
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 92/220 (41%), Gaps = 26/220 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE----VNYLGQL 135
LG G FG V ++ ++ K M +AVK L +E L ++YLG
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF--------------QPLSW 181
H N+V L+G C L++ E+ G L N L R+ F L
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 182 NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH 241
L + AKG+AFL A I+RD NILL K+ DFGLA+
Sbjct: 168 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
V + APE + T +SDV+S+G+ L E+ S
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 95/228 (41%), Gaps = 35/228 (15%)
Query: 67 LKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW- 125
+K +F +LG+G FG VF A T A+K L +D +
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVF---------LAEFKKTNQFFAIKALKKDVVLMDDDVE 62
Query: 126 --LAEVNYLGQLY-HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHL-------FRRGSY 175
+ E L + HP L + ++ V E++ G L H+ R ++
Sbjct: 63 CTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF 122
Query: 176 FQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGP 235
+ A G+ FLH ++YRD K NILLD + + K++DFG+ K+
Sbjct: 123 Y-----------AAEIILGLQFLHSK--GIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169
Query: 236 TGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
GD + GT Y APE L D +SFGV+L EML G+
Sbjct: 170 LGDAK--TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 67
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +GSL + F +G + L + +A A
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD +NIL+ N K++DFGLA+ + + + R +
Sbjct: 125 SGMAYVE--RMNYVHRDLAAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 179
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 68 KTATRNFRPDSVLGEGGFGSV--FKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW 125
K + ++F+ LG G FG V + + +A +V+ +K++
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN------- 54
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
E L + HP ++++ G + ++ +++ G L + L + + P++
Sbjct: 55 -DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAA 113
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
+V L + +LH + +IYRD K NILLD N + K++DFG AK P V+
Sbjct: 114 EVCLA----LEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYX 162
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE ++T D +SFG+++ EML+G
Sbjct: 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNY 131
+FR VLG G F V A T ++A+K + ++ +G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVI---------LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L ++ HPN+V L H L+ + + G L + + +G Y + + L +V
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL--- 126
Query: 192 AKGVAFLHGAETKVIYRDFKTSNIL---LDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
V +LH + +++RD K N+L LD + +SDFGL+K D V + G
Sbjct: 127 -DAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
T GY APE LA + D +S GV+ +L G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ PRG + L + + + + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + +
Sbjct: 122 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXL 171
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 222
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 223 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 260
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVF----KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE 128
F VLG+G FG VF D A K + V+ + + ++ L E
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME--RDILVE 82
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
VN HP +VKL Y + + +L L+ +F+ G L L + + + +K
Sbjct: 83 VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE-----DVKF 130
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
L A +A H +IYRD K NILLD + KL+DFGL+K+ + D +
Sbjct: 131 YL-AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFC 187
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + T +D +SFGV++ EML+G
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 117 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TEL 166
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 217
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 218 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFK----GWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK 123
K F VLG+G FG VF D A K + V+ + + +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME--R 77
Query: 124 EWLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWN 182
+ L EVN HP +VKL Y + + +L L+ +F+ G L L + + +
Sbjct: 78 DILVEVN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE---- 126
Query: 183 LRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHV 242
+K L A +A H +IYRD K NILLD + KL+DFGL+K+ + D
Sbjct: 127 -DVKFYL-AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKK 182
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + T +D +SFGV++ EML+G
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNY 131
+FR VLG G F V A T ++A+K + ++ +G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVI---------LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L ++ HPN+V L H L+ + + G L + + +G Y + + L +V
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL--- 126
Query: 192 AKGVAFLHGAETKVIYRDFKTSNIL---LDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
V +LH + +++RD K N+L LD + +SDFGL+K D V + G
Sbjct: 127 -DAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
T GY APE LA + D +S GV+ +L G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 21/231 (9%)
Query: 57 PNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ 116
P + + + + R + LG+G FG V+ G T GT V A+K L +
Sbjct: 170 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-K 218
Query: 117 DGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF 176
G + +L E + +L H LV+L + ++ +V E+M +GSL + F +G
Sbjct: 219 PGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMG 275
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT 236
+ L + +A A G+A++ ++RD + +NIL+ N K++DFGL G
Sbjct: 276 KYLRLPQLVDMAAQIASGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGL---GRL 330
Query: 237 GDQSHVSTRVMGTY--GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ + + R + + APE G T KSDV+SFG++L E+ + R
Sbjct: 331 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 381
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 67
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +G L + F +G + L + +A A
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLD--FLKGEMGKYLRLPQLVDMAAQIA 124
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 125 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 179
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVF----KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAE 128
F VLG+G FG VF D A K + V+ + + ++ L E
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME--RDILVE 83
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
VN HP +VKL Y + + +L L+ +F+ G L L + + + +K
Sbjct: 84 VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE-----DVKF 131
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
L A +A H +IYRD K NILLD + KL+DFGL+K+ + D +
Sbjct: 132 YL-AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFC 188
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + T +D +SFGV++ EML+G
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE---WLAEVNYLGQL 135
VLG+G FG V + + GT + AVK L +D + + E L
Sbjct: 348 VLGKGSFGKVM---------LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 136 YHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
P + + C + RL V E++ G L H+ + G + +P + ++A+G
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG---- 454
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK----DGPTGDQSHVSTRVMGTY 250
+ FL +IYRD K N++LD+ + K++DFG+ K DG T + GT
Sbjct: 455 LFFLQSK--GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT------TKXFCGTP 506
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
Y APE +A D ++FGV+L EML+G+
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 73
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 74 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 133
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 134 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 183
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 184 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 234
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 235 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 272
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 122 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 171
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 222
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 223 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 260
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 16 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 64
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +GSL + F +G + L + ++ A
Sbjct: 65 KKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLD--FLKGETGKYLRLPQLVDMSAQIA 121
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 122 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 176
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 120 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 169
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 220
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 221 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 122 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 171
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 222
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 223 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 260
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 117 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 166
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 217
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 218 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ R + LG+G FG V+ G T GT V A+K L + G + +L E +
Sbjct: 16 SLRLEVKLGQGCFGEVWMG---------TWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVM 64
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+L H LV+L + ++ +V E+M +GSL + F +G + L + ++ A
Sbjct: 65 KKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLD--FLKGETGKYLRLPQLVDMSAQIA 121
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY-- 250
G+A++ ++RD + +NIL+ N K++DFGLA+ + + + R +
Sbjct: 122 SGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEWTARQGAKFPI 176
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
+ APE G T KSDV+SFG++L E+ + R
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+A +++ H +VI+RD K N+LL + K++DFG + P+ ++ +S
Sbjct: 118 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS--- 168
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 169 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 218
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 219 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 256
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 24/214 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNY 131
+FR VLG G F V A T ++A+K + + +G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVI---------LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L ++ HPN+V L H L+ + + G L + + +G Y + + L +V
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL--- 126
Query: 192 AKGVAFLHGAETKVIYRDFKTSNIL---LDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
V +LH + +++RD K N+L LD + +SDFGL+K D V + G
Sbjct: 127 -DAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
T GY APE LA + D +S GV+ +L G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 118 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 167
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 218
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 219 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 117 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 166
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 217
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 218 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-------QDG 118
D+K+ + + LGEG F +V+K A T ++A+K++ +DG
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYK---------ARDKNTNQIVAIKKIKLGHRSEAKDG 54
Query: 119 FQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQP 178
++ L E+ L +L HPN++ L+ + LV++FM LE + P
Sbjct: 55 I--NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTP 111
Query: 179 LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGD 238
+ + L +G+ +LH + +++RD K +N+LLD N KL+DFGLAK + +
Sbjct: 112 SHIKAYMLMTL---QGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166
Query: 239 QSHVSTRVMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEML 280
+++ V T Y APE L + D+++ G +L E+L
Sbjct: 167 RAYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 117 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXL 166
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 217
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 218 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 117 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 166
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 217
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 218 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEVNYLGQL 135
VLG+G FG V + + GT + AVK L +D + + E L
Sbjct: 27 VLGKGSFGKVM---------LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 136 YHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
P + + C + RL V E++ G L H+ + G + +P + ++A+G
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG---- 133
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK----DGPTGDQSHVSTRVMGTY 250
+ FL +IYRD K N++LD+ + K++DFG+ K DG T + GT
Sbjct: 134 LFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT------TKXFCGTP 185
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
Y APE +A D ++FGV+L EML+G+
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 40/292 (13%)
Query: 65 SDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG--- 121
S + A +F LG+G FG+V+ A + + ++A+K L + +
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGV 55
Query: 122 HKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSW 181
+ EV L HPN+++L GY + L+ E+ P G++ L + + + +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 115
Query: 182 NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH 241
++ A +++ H +VI+RD K N+LL + K++DFG + P+ +
Sbjct: 116 TYITEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 167
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWA 301
T + GT Y PE + K D++S GV+ E L G+ + N +
Sbjct: 168 --TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQ 216
Query: 302 KPYLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
+ Y R F D EG A L R L RPM+ EV+
Sbjct: 217 ETYKRISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 55
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 116 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 165
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 166 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 216
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 217 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 254
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDG-FQGHKEWLAEVNYLGQLYHP 138
LG+G FG V++G ++ K +AVK +N+ + E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ------PLSWNLRLKVALGAA 192
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++R+ N ++ ++ K+ DFG+ +D D + + +
Sbjct: 141 DGMAYLNAK--KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
APE L G T SD++SFGVVL E+ S
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 125/294 (42%), Gaps = 47/294 (15%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDG-FQGHKEWLAEVNYLGQLYHP 138
LG+G FG V++G ++ K +AVK +N+ + E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ------PLSWNLRLKVALGAA 192
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 141 DGMAYLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
APE L G T SD++SFGVVL E+ S L E +PY
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQG------ 235
Query: 313 RIIDNRLEGQYTLEGAY---------KAATLALRCLSTEGKFRPMMAEVVTVLE 357
+ N ++ ++G Y + L C K RP E+V +L+
Sbjct: 236 --LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 24/224 (10%)
Query: 71 TRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-DGFQGHKEWLAEV 129
+ +F+ S+LGEG +G V +AT TG ++A+K++ D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVVC---------SATHKPTGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
L H N++ + D ++ + ++ L R S Q LS +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIY 119
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---------DGPTGDQS 240
+ V LHG + VI+RD K SN+L+++N + K+ DFGLA+ PTG QS
Sbjct: 120 QTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 241 HVSTRVMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
+ + T Y APE + T +++ DV+S G +L E+ R
Sbjct: 178 GM-VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDG-FQGHKEWLAEVNYLGQLYHP 138
LG+G FG V++G ++ K +AVK +N+ + E+L E + +
Sbjct: 26 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ------PLSWNLRLKVALGAA 192
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+A+L+ K ++R+ N ++ ++ K+ DFG+ +D D + + +
Sbjct: 142 DGMAYLNAK--KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
APE L G T SD++SFGVVL E+ S
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---------LAREKNSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H KVI+RD K N+LL + K++DFG + P+ ++ +
Sbjct: 117 L----ANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC--- 167
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + Y
Sbjct: 168 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQDTYKR 217
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 218 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK---EWLAEVNYLGQLY 136
LG G FG V G +H TG +AVK LN+ + + E+ L
Sbjct: 24 LGVGTFGKVKVG---KHEL------TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
HP+++KL +V E++ G L +++ + G + S L ++ GV
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQIL----SGVD 130
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+ H V++RD K N+LLD + NAK++DFGL+ G+ S G+ YAAPE
Sbjct: 131 YCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE 185
Query: 257 YLATGHLTA--KSDVYSFGVVLLEMLSGRRAVDKN 289
+ +G L A + D++S GV+L +L G D +
Sbjct: 186 VI-SGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 120 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 169
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 220
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 221 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 258
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 128/314 (40%), Gaps = 40/314 (12%)
Query: 43 VPPTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATK 102
+P P + E + K+ + A +F LG+G FG+V+ A +
Sbjct: 5 LPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVY---------LARE 55
Query: 103 PGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEF 159
+ ++A+K L + + + EV L HPN+++L GY + L+ E+
Sbjct: 56 KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 115
Query: 160 MPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT 219
P G++ L + + + + ++ A +++ H +VI+RD K N+LL +
Sbjct: 116 APLGTVYRELQKLSKFDEQRTATYITEL----ANALSYCHS--KRVIHRDIKPENLLLGS 169
Query: 220 NYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEM 279
K++DFG + P+ + + GT Y PE + K D++S GV+ E
Sbjct: 170 AGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 225
Query: 280 LSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCL 339
L G+ + N + + Y R F D EG A L R L
Sbjct: 226 LVGKPPFEAN---------TYQETYKRISRVEFTFPDFVTEG---------ARDLISRLL 267
Query: 340 STEGKFRPMMAEVV 353
RPM+ EV+
Sbjct: 268 KHNPSQRPMLREVL 281
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 64 FSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK 123
FSDL+ +G G FG+V+ A V+A+K+++ G Q ++
Sbjct: 17 FSDLRE----------IGHGSFGAVY---------FARDVRNSEVVAIKKMSYSGKQSNE 57
Query: 124 EW---LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLS 180
+W + EV +L +L HPN ++ G L + LV E+ GS + L + +PL
Sbjct: 58 KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL---EVHKKPLQ 113
Query: 181 WNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQS 240
V GA +G+A+LH +I+RD K NILL KL DFG A +
Sbjct: 114 EVEIAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX- 170
Query: 241 HVSTRVMGTYGYAAPEYLAT---GHLTAKSDVYSFGVVLLEM 279
+GT + APE + G K DV+S G+ +E+
Sbjct: 171 -----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+G+G G+V+ A TG +A++++N + + E+ + + +PN
Sbjct: 28 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V + L D +V E++ GSL + + ++ V + + FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLH 133
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+VI+RD K+ NILL + + KL+DFG T +QS ST V GT + APE +
Sbjct: 134 S--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSTMV-GTPYWMAPEVVT 189
Query: 260 TGHLTAKSDVYSFGVVLLEMLSGR 283
K D++S G++ +EM+ G
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 13 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLN 63
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 119
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 120 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 13 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 119
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 120 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 11 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 61
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 117
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 118 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 232
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 12 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 12 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 12 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 12 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 12 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 13 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 119
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 120 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 13 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 119
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 120 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 13 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 119
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 120 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 107/237 (45%), Gaps = 18/237 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 12 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPS-GEHNLVEWAKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S E++ + K YL +KI
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 12 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 74 FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYL 132
F LG G F V A + TG + AVK + + +G + + E+ L
Sbjct: 24 FEFKETLGTGAFSEVV---------LAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
++ H N+V L +H LV + + G L + + +G Y + + L ++ L A
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL-IRQVLDA- 132
Query: 193 KGVAFLHGAETKVIYRDFKTSNILL---DTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT 249
V +LH +++RD K N+L D +SDFGL+K GD V + GT
Sbjct: 133 --VYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGT 185
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GY APE LA + D +S GV+ +L G
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ ++ +
Sbjct: 120 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC--- 170
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 171 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 220
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 221 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 258
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 13 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 119
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 120 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 122 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 171
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKN 289
GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 172 CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 13 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 119
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 120 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + +
Sbjct: 119 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC--- 169
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 170 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 219
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 220 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 257
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 12 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 12 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 12 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + ++A+K L + + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVY---------LAREKQRKFILALKVLFKAQLEKAGVEHQLR 53
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 54 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 113
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + T +
Sbjct: 114 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 163
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 164 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 214
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 215 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 252
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
D LG G FGSV +G + K +A+K L Q + +E + E + QL
Sbjct: 15 DIELGCGNFGSVRQG-----VYRMRKKQID--VAIKVLKQGTEKADTEEMMREAQIMHQL 67
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
+P +V+L+G C + + +LV E G L L + P+S N+ ++ + G+
Sbjct: 68 DNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PVS-NV-AELLHQVSMGM 123
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYA 253
+L E ++RD N+LL + AK+SDFGL+K D S+ + R G + +
Sbjct: 124 KYLE--EKNFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWY 180
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS 281
APE + +++SDV+S+GV + E LS
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K+++FG + P+ + T +
Sbjct: 119 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTL 168
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 219
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 220 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 257
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 107/237 (45%), Gaps = 18/237 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 13 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 63
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 119
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 120 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPS-GEHNLVEWAKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S E++ + K YL +KI
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-EVNYLGQLY 136
LGEG +G V A T +AVK ++ E + E+ L
Sbjct: 12 QTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+VK G+ E + + L E+ G L + + +P + R L A GV
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMA--GVV 118
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 257 YLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPYLASKRKI 311
L A+ DV+S G+VL ML+G D+ S + +W K YL +KI
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE-YSDWKEKKTYLNPWKKI 233
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ ++ +
Sbjct: 117 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC--- 167
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 168 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 217
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 218 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FG+V+ ++ F V+ +L ++G + + E+ L HPN
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMAL----KVLFKSQLEKEGVE--HQLRREIEIQSHLRHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
++++ Y + L+ EF PRG L L + G + + S ++ A + + H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----ADALHYCH 131
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM-GTYGYAAPEYL 258
E KVI+RD K N+L+ K++DFG + P+ + R M GT Y PE +
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMI 184
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVD 287
K D++ GV+ E L G D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + +
Sbjct: 120 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC--- 170
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 171 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 220
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 221 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 258
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 20/243 (8%)
Query: 61 SFSFSDLKTATRN-FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF 119
+ + + + T+N FR VLG+GGFG V A TG + A K+L +
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVC---------ACQVRATGKMYACKKLEKKRI 222
Query: 120 Q---GHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF 176
+ G L E L ++ +V L D LV M G L+ H++ G
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG 282
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT 236
P + + + G+ LH +++YRD K NILLD + + ++SD GLA P
Sbjct: 283 FPEARAVFYAAEICC--GLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338
Query: 237 GDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHN 296
G + RV GT GY APE + T D ++ G +L EM++G+ + + +
Sbjct: 339 G--QTIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
Query: 297 LVE 299
VE
Sbjct: 396 EVE 398
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FG+V+ ++ F V+ +L ++G + + E+ L HPN
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMAL----KVLFKSQLEKEGVE--HQLRREIEIQSHLRHPN 76
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
++++ Y + L+ EF PRG L L + G + + S ++ A + + H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----ADALHYCH 132
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM-GTYGYAAPEYL 258
E KVI+RD K N+L+ K++DFG + P+ + R M GT Y PE +
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMI 185
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVD 287
K D++ GV+ E L G D
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + +
Sbjct: 118 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TL 167
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 218
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 219 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 256
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 25/213 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQLY 136
LGEG FG V AT T +A+K +++ + H E++YL L
Sbjct: 17 LGEGSFGKVK---------LATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
HP+++KL ++V E+ G L +++ + + ++ +
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA----IE 122
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+ H K+++RD K N+LLD N N K++DFGL+ G+ S G+ YAAPE
Sbjct: 123 YCH--RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 177
Query: 257 YLATGHLTA--KSDVYSFGVVLLEMLSGRRAVD 287
+ G L A + DV+S G+VL ML GR D
Sbjct: 178 VI-NGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K+++FG + P+ + T +
Sbjct: 120 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTL 169
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 220
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 221 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 258
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 118/245 (48%), Gaps = 31/245 (12%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
LG G FG V G W ++ +A+K + ++G E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G C + ++ E+M G L N+L FQ L++ + + +L
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 121
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT---YGYAAP 255
+ ++RD N L++ K+SDFGL++ D + S+R G+ ++ P
Sbjct: 122 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSSR--GSKFPVRWSPP 175
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLS-GRRAVDK--NRPSGEH--NLVEWAKPYLASKRK 310
E L ++KSD+++FGV++ E+ S G+ ++ N + EH + +P+LAS+ K
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE-K 234
Query: 311 IFRII 315
++ I+
Sbjct: 235 VYTIM 239
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G FG+V+ ++ F V+ +L ++G + + E+ L HPN
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMAL----KVLFKSQLEKEGVE--HQLRREIEIQSHLRHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
++++ Y + L+ EF PRG L L + G + + S ++ A + + H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----ADALHYCH 131
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM-GTYGYAAPEYL 258
E KVI+RD K N+L+ K++DFG + P+ + R M GT Y PE +
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMI 184
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVD 287
K D++ GV+ E L G D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 74 FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQ---GHKEWLAEVN 130
++ VLG+G FG V TG AVK +++ + + L EV
Sbjct: 28 YKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L QL HPN++KL + + + LV E G L + + R + + + + +V
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL-- 136
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
G+ ++H + K+++RD K N+LL++ + N ++ DFGL+ + S +
Sbjct: 137 --SGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKI 189
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE L G K DV+S GV+L +LSG
Sbjct: 190 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
LG G FG V G W ++ +A+K + ++G E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 79
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G C + ++ E+M G L N+L FQ L++ + + +L
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 136
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
+ ++RD N L++ K+SDFGL++ D+ S ++ PE L
Sbjct: 137 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEETSSVGSKFPVRWSPPEVL 193
Query: 259 ATGHLTAKSDVYSFGVVLLEMLS-GRRAVDK--NRPSGEH--NLVEWAKPYLASKRKIFR 313
++KSD+++FGV++ E+ S G+ ++ N + EH + +P+LAS+ K++
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE-KVYT 252
Query: 314 II 315
I+
Sbjct: 253 IM 254
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 20/243 (8%)
Query: 61 SFSFSDLKTATRN-FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF 119
+ + + + T+N FR VLG+GGFG V A TG + A K+L +
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVC---------ACQVRATGKMYACKKLEKKRI 222
Query: 120 Q---GHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF 176
+ G L E L ++ +V L D LV M G L+ H++ G
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG 282
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT 236
P + + + G+ LH +++YRD K NILLD + + ++SD GLA P
Sbjct: 283 FPEARAVFYAAEICC--GLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338
Query: 237 GDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHN 296
G + RV GT GY APE + T D ++ G +L EM++G+ + + +
Sbjct: 339 G--QTIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
Query: 297 LVE 299
VE
Sbjct: 396 EVE 398
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 74 FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQ---GHKEWLAEVN 130
++ VLG+G FG V TG AVK +++ + + L EV
Sbjct: 34 YKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 84
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L QL HPN++KL + + + LV E G L + + R + + + + +V
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL-- 142
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
G+ ++H + K+++RD K N+LL++ + N ++ DFGL+ + S +
Sbjct: 143 --SGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKI 195
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE L G K DV+S GV+L +LSG
Sbjct: 196 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 27/241 (11%)
Query: 44 PPTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKP 103
PP P+ + + P++ + + NFR + +G G F V++ A
Sbjct: 11 PPVPQFQPQKALRPDMGYNTLA-------NFRIEKKIGRGQFSEVYR---------AACL 54
Query: 104 GTGMVIAVKRLNQDGFQGHK---EWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFM 160
G+ +A+K++ K + + E++ L QL HPN++K +ED+ +V E
Sbjct: 55 LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELA 114
Query: 161 PRGSLENHL--FRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLD 218
G L + F++ P + V L + A H +V++RD K +N+ +
Sbjct: 115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS----ALEHMHSRRVMHRDIKPANVFIT 170
Query: 219 TNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLE 278
KL D GL + ++ + ++GT Y +PE + KSD++S G +L E
Sbjct: 171 ATGVVKLGDLGLGRF--FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE 228
Query: 279 M 279
M
Sbjct: 229 M 229
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 74 FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQ---GHKEWLAEVN 130
++ VLG+G FG V TG AVK +++ + + L EV
Sbjct: 51 YKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 101
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L QL HPN++KL + + + LV E G L + + R + + + + +V
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL-- 159
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
G+ ++H + K+++RD K N+LL++ + N ++ DFGL+ + S +
Sbjct: 160 --SGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKI 212
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE L G K DV+S GV+L +LSG
Sbjct: 213 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + +
Sbjct: 120 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC--- 170
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 171 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 220
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 221 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 258
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 74 FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQ---GHKEWLAEVN 130
++ VLG+G FG V TG AVK +++ + + L EV
Sbjct: 52 YKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 102
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L QL HPN++KL + + + LV E G L + + R + + + + +V
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL-- 160
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
G+ ++H + K+++RD K N+LL++ + N ++ DFGL+ + S +
Sbjct: 161 --SGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKI 213
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE L G K DV+S GV+L +LSG
Sbjct: 214 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 40/287 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWL 126
A +F LG+G FG+V+ A + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L HPN+++L GY + L+ E+ P G++ L + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ A +++ H +VI+RD K N+LL + K++DFG + P+ + +
Sbjct: 117 L----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC--- 167
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLA 306
GT Y PE + K D++S GV+ E L G+ + N + + Y
Sbjct: 168 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKR 217
Query: 307 SKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
R F D EG A L R L RPM+ EV+
Sbjct: 218 ISRVEFTFPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 22/214 (10%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNY 131
+ F VLG G F VF + TG + A+K + + E+
Sbjct: 9 KTFIFMEVLGSGAFSEVF---------LVKQRLTGKLFALKCIKKSPAFRDSSLENEIAV 59
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L ++ H N+V L H LV + + G L + + RG Y + + +L ++ L A
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDA-SLVIQQVLSA 118
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
K +LH E +++RD K N+L T N ++DFGL+K +Q+ + + G
Sbjct: 119 VK---YLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK----MEQNGIMSTACG 169
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
T GY APE LA + D +S GV+ +L G
Sbjct: 170 TPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQLY 136
LG+G FG+V+ A + + ++A+K L + + + EV L
Sbjct: 20 LGKGKFGNVY---------LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
HPN+++L GY + L+ E+ P G++ L + + + + ++A ++
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELA----NALS 126
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+ H +VI+RD K N+LL +N K++DFG + P+ + T + GT Y PE
Sbjct: 127 YCHSK--RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE 180
Query: 257 YLATGHLTAKSDVYSFGVVLLEMLSG 282
+ K D++S GV+ E L G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+G+G G+V+ A TG +A++++N + + E+ + + +PN
Sbjct: 29 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V + L D +V E++ GSL + + ++ V + + FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLH 134
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+VI+R+ K+ NILL + + KL+DFG T +QS ST V GT + APE +
Sbjct: 135 S--NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSTMV-GTPYWMAPEVVT 190
Query: 260 TGHLTAKSDVYSFGVVLLEMLSGR 283
K D++S G++ +EM+ G
Sbjct: 191 RKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+G+G G+V+ A TG +A++++N + + E+ + + +PN
Sbjct: 29 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V + L D +V E++ GSL + + ++ V + + FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLH 134
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+VI+RD K+ NILL + + KL+DFG T +QS S V GT + APE +
Sbjct: 135 S--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSXMV-GTPYWMAPEVVT 190
Query: 260 TGHLTAKSDVYSFGVVLLEMLSGR 283
K D++S G++ +EM+ G
Sbjct: 191 RKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 120/278 (43%), Gaps = 42/278 (15%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-QDGFQGHKEWLAEVNYLGQLYHP 138
+G+G FG VFKG ID T V+A+K ++ ++ ++ E+ L Q
Sbjct: 31 IGKGSFGEVFKG-IDNR--------TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
+ K G L+ ++ E++ GS + L R F LK L KG+ +L
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEIL---KGLDYL 136
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
H K I+RD K +N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 137 HSE--KKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVI 192
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNR 318
+K+D++S G+ +E+ G P R +F I N
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM----------------RVLFLIPKNN 236
Query: 319 ---LEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
L G +T ++K A CL+ + FRP E++
Sbjct: 237 PPTLVGDFT--KSFKEFIDA--CLNKDPSFRPTAKELL 270
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+G+G G+V+ A TG +A++++N + + E+ + + +PN
Sbjct: 28 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V + L D +V E++ GSL + + ++ V + + FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLH 133
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+VI+RD K+ NILL + + KL+DFG T +QS S V GT + APE +
Sbjct: 134 S--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSXMV-GTPYWMAPEVVT 189
Query: 260 TGHLTAKSDVYSFGVVLLEMLSGR 283
K D++S G++ +EM+ G
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF---QGHKEWLAEV 129
+F ++G GGFG V+ K TG + A+K L++ QG L E
Sbjct: 190 DFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 130 NYLGQLYHPN--LVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
L + + + + Y +L + + M G L HL + G + + +
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ LG H V+YRD K +NILLD + + ++SD GLA D + + H S
Sbjct: 301 IILGLE------HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS--- 350
Query: 247 MGTYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNL 297
+GT+GY APE L G + +D +S G +L ++L G +++ +H +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF---QGHKEWLAEV 129
+F ++G GGFG V+ K TG + A+K L++ QG L E
Sbjct: 190 DFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 130 NYLGQLYHPN--LVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
L + + + + Y +L + + M G L HL + G + + +
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ LG H V+YRD K +NILLD + + ++SD GLA D + + H S
Sbjct: 301 IILGLE------HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS--- 350
Query: 247 MGTYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNL 297
+GT+GY APE L G + +D +S G +L ++L G +++ +H +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF---QGHKEWLAEV 129
+F ++G GGFG V+ K TG + A+K L++ QG L E
Sbjct: 190 DFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 130 NYLGQLYHPN--LVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
L + + + + Y +L + + M G L HL + G + + +
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ LG H V+YRD K +NILLD + + ++SD GLA D + + H S
Sbjct: 301 IILGLE------HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS--- 350
Query: 247 MGTYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNL 297
+GT+GY APE L G + +D +S G +L ++L G +++ +H +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+G+G G+V+ A TG +A++++N + + E+ + + +PN
Sbjct: 28 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V + L D +V E++ GSL + + ++ V + + FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLH 133
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
+VI+RD K+ NILL + + KL+DFG T +QS S V GT + APE +
Sbjct: 134 S--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSEMV-GTPYWMAPEVVT 189
Query: 260 TGHLTAKSDVYSFGVVLLEMLSGR 283
K D++S G++ +EM+ G
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E+ L H N+VK G+ E + + L E+ G L + + +P + R
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFH 111
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
L A GV +LHG + +RD K N+LLD N K+SDFGLA ++ + ++
Sbjct: 112 QLMA--GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 248 GTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEW--AKPY 304
GT Y APE L A+ DV+S G+VL ML+G D+ S + +W K Y
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTY 226
Query: 305 LASKRKI 311
L +KI
Sbjct: 227 LNPWKKI 233
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
LG G FG V G W ++ +A+K + ++G E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 79
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G C + ++ E+M G L N+L FQ L++ + + +L
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 136
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
+ ++RD N L++ K+SDFGL++ D+ S ++ PE L
Sbjct: 137 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVL 193
Query: 259 ATGHLTAKSDVYSFGVVLLEMLS-GRRAVDK--NRPSGEH--NLVEWAKPYLASKRKIFR 313
++KSD+++FGV++ E+ S G+ ++ N + EH + +P+LAS+ K++
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE-KVYT 252
Query: 314 II 315
I+
Sbjct: 253 IM 254
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
LG G FG V G W ++ +A+K + ++G E++ E + L H
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 59
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G C + ++ E+M G L N+L FQ L++ + + +L
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 116
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
+ ++RD N L++ K+SDFGL++ D+ S ++ PE L
Sbjct: 117 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVL 173
Query: 259 ATGHLTAKSDVYSFGVVLLEMLS-GRRAVDK--NRPSGEH--NLVEWAKPYLASKRKIFR 313
++KSD+++FGV++ E+ S G+ ++ N + EH + +P+LAS+ K++
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE-KVYT 232
Query: 314 II 315
I+
Sbjct: 233 IM 234
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF---QGHKEWLAEV 129
+F ++G GGFG V+ K TG + A+K L++ QG L E
Sbjct: 189 DFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 239
Query: 130 NYLGQLYHPN--LVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
L + + + + Y +L + + M G L HL + G + + +
Sbjct: 240 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE 299
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
+ LG H V+YRD K +NILLD + + ++SD GLA D + + H S
Sbjct: 300 IILGLE------HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS--- 349
Query: 247 MGTYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNL 297
+GT+GY APE L G + +D +S G +L ++L G +++ +H +
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+GEG G V AT+ TG +AVK+++ Q + EV + +H N
Sbjct: 53 IGEGSTGIVC---------IATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V + L D +V EF+ G+L + + + ++ V L + +++LH
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLH 158
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
VI+RD K+ +ILL ++ KLSDFG + ++GT + APE ++
Sbjct: 159 N--QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQ--VSKEVPKRKXLVGTPYWMAPEVIS 214
Query: 260 TGHLTAKSDVYSFGVVLLEMLSG 282
+ D++S G++++EM+ G
Sbjct: 215 RLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
LG G FG V G W ++ +A+K + ++G E++ E + L H
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 63
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G C + ++ E+M G L N+L FQ L++ + + +L
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 120
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
+ ++RD N L++ K+SDFGL++ D+ S ++ PE L
Sbjct: 121 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVL 177
Query: 259 ATGHLTAKSDVYSFGVVLLEMLS-GRRAVDK--NRPSGEH--NLVEWAKPYLASKRKIFR 313
++KSD+++FGV++ E+ S G+ ++ N + EH + +P+LAS+ K++
Sbjct: 178 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE-KVYT 236
Query: 314 II 315
I+
Sbjct: 237 IM 238
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 97/233 (41%), Gaps = 54/233 (23%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+F+ ++G GGFG VFK A G +KR+ + + +E V L
Sbjct: 12 DFKEIELIGSGGFGQVFK---------AKHRIDGKTYVIKRVKYNNEKAERE----VKAL 58
Query: 133 GQLYHPNLVKLVG---------------------YCLEDDHRLLVYEFMPRGSLENHLFR 171
+L H N+V G CL + EF +G+LE + +
Sbjct: 59 AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCL-----FIQMEFCDKGTLEQWIEK 113
Query: 172 RGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLA 231
R + L L L++ KGV ++H K+I RD K SNI L K+ DFGL
Sbjct: 114 RRG--EKLDKVLALELFEQITKGVDYIHSK--KLINRDLKPSNIFLVDTKQVKIGDFGLV 169
Query: 232 ----KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEML 280
DG R GT Y +PE +++ + D+Y+ G++L E+L
Sbjct: 170 TSLKNDGK-------RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 22/230 (9%)
Query: 64 FSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH- 122
D+ + F +LG+G FGSV + + + G+ + +AVK L D
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQED------GSFVKVAVKMLKADIIASSD 68
Query: 123 -KEWLAEVNYLGQLYHPNLVKLVGYCLEDDHR------LLVYEFMPRGSLENHLFRRGSY 175
+E+L E + + HP++ KLVG L + +++ FM G L H F S
Sbjct: 69 IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDL--HAFLLASR 126
Query: 176 FQPLSWNLRLKV----ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLA 231
+NL L+ + A G+ +L + I+RD N +L + ++DFGL+
Sbjct: 127 IGENPFNLPLQTLVRFMVDIACGMEYL--SSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
Query: 232 KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ +GD + A E LA T SDV++FGV + E+++
Sbjct: 185 RKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDE---HSFAATKPGTGMVIAVKRLNQDGFQGHKE 124
K + + P V+G G SV + + H FA M + +RL+ + + +E
Sbjct: 90 KEFYQKYDPKDVIGRG-VSSVVRRCVHRATGHEFAVKI----MEVTAERLSPEQLEEVRE 144
Query: 125 WLA-EVNYLGQLY-HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWN 182
E + L Q+ HP+++ L+ LV++ M +G L ++L + + LS
Sbjct: 145 ATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA----LSEK 200
Query: 183 LRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHV 242
+ + V+FLH +++RD K NILLD N +LSDFG + G++
Sbjct: 201 ETRSIMRSLLEAVSFLHA--NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR- 257
Query: 243 STRVMGTYGYAAPEYLATGHLTA------KSDVYSFGVVLLEMLSG 282
+ GT GY APE L + D+++ GV+L +L+G
Sbjct: 258 --ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 93/219 (42%), Gaps = 21/219 (9%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW-- 125
+ NF VLG+G FG V + E TG + AVK L +D +
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKE---------TGDLYAVKVLKKDVILQDDDVEC 69
Query: 126 -LAEVNYLGQLY-HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNL 183
+ E L HP L +L D V EF+ G L H+ + + + +
Sbjct: 70 TMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARA--- 126
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVS 243
R A + FLH + +IYRD K N+LLD + KL+DFG+ K+G + +
Sbjct: 127 RFYAA-EIISALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--T 181
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE L D ++ GV+L EML G
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
LG G FG V G W ++ +A+K + ++G E++ E + L H
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 70
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G C + ++ E+M G L N+L FQ L++ + + +L
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 127
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
+ ++RD N L++ K+SDFGL++ D+ S ++ PE L
Sbjct: 128 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVL 184
Query: 259 ATGHLTAKSDVYSFGVVLLEMLS-GRRAVDK--NRPSGEH--NLVEWAKPYLASKRKIFR 313
++KSD+++FGV++ E+ S G+ ++ N + EH + +P+LAS+ K++
Sbjct: 185 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE-KVYT 243
Query: 314 II 315
I+
Sbjct: 244 IM 245
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+GGF F E S A TK I K L Q K + E++ L H +
Sbjct: 47 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQH 100
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V G+ ++D +V E R SL RR + +P + ++ LG +LH
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 156
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLA-KDGPTGDQSHVSTRVMGTYGYAAPEYL 258
+VI+RD K N+ L+ + K+ DFGLA K G++ V + GT Y APE L
Sbjct: 157 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 211
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGR 283
+ + + DV+S G ++ +L G+
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 119/282 (42%), Gaps = 31/282 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+GGF F E S A TK I K L Q K + E++ L H +
Sbjct: 49 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQH 102
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V G+ ++D +V E R SL RR + +P + ++ LG +LH
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 158
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLA-KDGPTGDQSHVSTRVMGTYGYAAPEYL 258
+VI+RD K N+ L+ + K+ DFGLA K G++ V + GT Y APE L
Sbjct: 159 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 213
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNR--------PSGEHNLVEWAKPYLASKRK 310
+ + + DV+S G ++ +L G+ + + E+++ + P AS +
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 273
Query: 311 IFRIID-------NRLEGQYTLEGAYKAATLALRCLSTEGKF 345
D N L Y A L + CL+ +F
Sbjct: 274 KMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRF 315
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
LG G FG V G W ++ +A+K + ++G E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
LV+L G C + ++ E+M G L N+L FQ L++ + + +L
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 121
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL 258
+ ++RD N L++ K+SDFGL++ D+ S ++ PE L
Sbjct: 122 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVL 178
Query: 259 ATGHLTAKSDVYSFGVVLLEMLS-GRRAVDK--NRPSGEH--NLVEWAKPYLASKRKIFR 313
++KSD+++FGV++ E+ S G+ ++ N + EH + +P+LAS+ K++
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE-KVYT 237
Query: 314 II 315
I+
Sbjct: 238 IM 239
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 74 FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQ---GHKEWLAEVN 130
++ VLG+G FG V TG AVK +++ + + L EV
Sbjct: 28 YKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L QL HPN+ KL + + + LV E G L + + R + + + + +V
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL-- 136
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
G+ + H + K+++RD K N+LL++ + N ++ DFGL+ + S +
Sbjct: 137 --SGITYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKDKI 189
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE L G K DV+S GV+L +LSG
Sbjct: 190 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQL 135
D LG G FGSV +G + K + +A+K L Q + +E + E + QL
Sbjct: 341 DIELGCGNFGSVRQG-----VYRMRK--KQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 393
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
+P +V+L+G C + + +LV E G L L + P+S N+ ++ + G+
Sbjct: 394 DNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PVS-NV-AELLHQVSMGM 449
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYA 253
+L E ++R+ N+LL + AK+SDFGL+K D S+ + R G + +
Sbjct: 450 KYLE--EKNFVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWY 506
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS 281
APE + +++SDV+S+GV + E LS
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 39/258 (15%)
Query: 63 SFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQ-- 120
S +D + N+R +G+G F V + H TG +AVK +++
Sbjct: 6 SATDEQPHIGNYRLQKTIGKGNFAKV---KLARHVL------TGREVAVKIIDKTQLNPT 56
Query: 121 GHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLS 180
++ EV + L HPN+VKL + LV E+ G + ++L G
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG------- 109
Query: 181 WNLRLKVALGAAK------GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG 234
R+K AK V + H + +++RD K N+LLD + N K++DFG + +
Sbjct: 110 ---RMKEKEARAKFRQIVSAVQYCH--QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF 164
Query: 235 PTGDQSHVSTRVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSG 293
G++ G+ YAAPE + + + DV+S GV+L ++SG + P
Sbjct: 165 TVGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFD 215
Query: 294 EHNLVEWAKPYLASKRKI 311
NL E + L K +I
Sbjct: 216 GQNLKELRERVLRGKYRI 233
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE---WLAEVN-YLGQ 134
V+G+G FG V A + AVK L + KE ++E N L
Sbjct: 45 VIGKGSFGKVL---------LARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKN 95
Query: 135 LYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
+ HP LV L D V +++ G L HL R + +P + R A A
Sbjct: 96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRA---RFYAA-EIASA 151
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAA 254
+ +LH ++YRD K NILLD+ + L+DFGL K+ + + ++ GT Y A
Sbjct: 152 LGYLHS--LNIVYRDLKPENILLDSQGHIVLTDFGLCKEN--IEHNSTTSTFCGTPEYLA 207
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSG 282
PE L D + G VL EML G
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+GGF F E S A TK I K L Q K + E++ L H +
Sbjct: 23 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQH 76
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V G+ ++D +V E R SL RR + +P + ++ LG +LH
Sbjct: 77 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 132
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLA-KDGPTGDQSHVSTRVMGTYGYAAPEYL 258
+VI+RD K N+ L+ + K+ DFGLA K G++ V + GT Y APE L
Sbjct: 133 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 187
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGR 283
+ + + DV+S G ++ +L G+
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 92/207 (44%), Gaps = 22/207 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL--NQDGFQGHKEWLAEVNYLGQLYH 137
+GEG +G VFK TG ++A+K+ ++D K L E+ L QL H
Sbjct: 11 IGEGSYGVVFK---------CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSL-ENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
PNLV L+ LV+E+ L E ++RG + +L + + V
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG-----VPEHLVKSITWQTLQAVN 116
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
F H + I+RD K NIL+ + KL DFG A+ TG + V T Y +PE
Sbjct: 117 FCH--KHNCIHRDVKPENILITKHSVIKLCDFGFAR-LLTGPSDYYDDEV-ATRWYRSPE 172
Query: 257 YLA-TGHLTAKSDVYSFGVVLLEMLSG 282
L DV++ G V E+LSG
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 27/211 (12%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATK---PGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
LG G FG V+ G + ++ A K PGT ++ + F L E + +L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGT--------MSPESF------LEEAQIMKKLK 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H LV+L + ++ +V E+M +GSL + F + + L + +A A G+A
Sbjct: 63 HDKLVQLYA-VVSEEPIYIVTEYMNKGSLLD--FLKDGEGRALKLPNLVDMAAQVAAGMA 119
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY--GYAA 254
++ I+RD +++NIL+ K++DFGLA+ + + + R + + A
Sbjct: 120 YIE--RMNYIHRDLRSANILVGNGLICKIADFGLAR---LIEDNEXTARQGAKFPIKWTA 174
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSGRRA 285
PE G T KSDV+SFG++L E+++ R
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELVTKGRV 205
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAE 128
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 37 EDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRE 87
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
+ + +L HP VKL +C +DD +L + G L ++ + GS+ + + ++
Sbjct: 88 RDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 146
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRV 246
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 147 V----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 201 -GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK---EWLAEVNYLGQLY 136
LG G FG V I EH TG +AVK LN+ + + E+ L
Sbjct: 19 LGVGTFGKV---KIGEHQL------TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
HP+++KL +V E++ G L +++ + G + + L ++ V
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL----SAVD 125
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+ H V++RD K N+LLD + NAK++DFGL+ G+ S G+ YAAPE
Sbjct: 126 YCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE 180
Query: 257 YLATGHLTA--KSDVYSFGVVLLEMLSGRRAVD 287
+ +G L A + D++S GV+L +L G D
Sbjct: 181 VI-SGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQLY 136
LG+G FG+V+ A + + ++A+K L + + + EV L
Sbjct: 20 LGKGKFGNVY---------LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
HPN+++L GY + L+ E+ P G++ L + + + + ++A ++
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELA----NALS 126
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+ H +VI+RD K N+LL +N K++DFG + P+ + + GT Y PE
Sbjct: 127 YCHSK--RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPE 180
Query: 257 YLATGHLTAKSDVYSFGVVLLEMLSG 282
+ K D++S GV+ E L G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 101/242 (41%), Gaps = 59/242 (24%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+F+ ++G GGFG VFK A G ++R+ + + +E V L
Sbjct: 13 DFKEIELIGSGGFGQVFK---------AKHRIDGKTYVIRRVKYNNEKAERE----VKAL 59
Query: 133 GQLYHPNLVKLVGYCLE---------DDHR---------------------LLVYEFMPR 162
+L H N+V G C + DD + EF +
Sbjct: 60 AKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 163 GSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN 222
G+LE + +R + L L L++ KGV ++H K+I+RD K SNI L
Sbjct: 119 GTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHSK--KLIHRDLKPSNIFLVDTKQ 174
Query: 223 AKLSDFGLA----KDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLE 278
K+ DFGL DG TR GT Y +PE +++ + D+Y+ G++L E
Sbjct: 175 VKIGDFGLVTSLKNDGK-------RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
Query: 279 ML 280
+L
Sbjct: 228 LL 229
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 27/220 (12%)
Query: 71 TRNFRPDSV-----LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL--NQDGFQGHK 123
TR+F D LG+G FG+V+ A + + ++A+K L +Q +G +
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNVY---------LAREKKSHFIVALKVLFKSQIEKEGVE 67
Query: 124 EWLA-EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWN 182
L E+ L+HPN+++L Y + L+ E+ PRG L L + ++ + +
Sbjct: 68 HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT 127
Query: 183 LRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHV 242
+ ++ A + + HG KVI+RD K N+LL K++DFG + P+ +
Sbjct: 128 IMEEL----ADALMYCHG--KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK-- 179
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y PE + K D++ GV+ E+L G
Sbjct: 180 --TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+GEG FG +T+ G VI +++ + +E EV L + HPN
Sbjct: 32 IGEGSFGKAI-------LVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHL-FRRGSYFQP---LSWNLRLKVALGAAKGV 195
+V+ E+ +V ++ G L + ++G FQ L W +++ +AL
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK----- 139
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAP 255
H + K+++RD K+ NI L + +L DFG+A+ ++ +GT Y +P
Sbjct: 140 ---HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARACIGTPYYLSP 194
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLSGRRAVD 287
E KSD+++ G VL E+ + + A +
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSY----FQPLSWNLRLKVALGAA 192
H N++ + D R E M L HL Y Q LS +
Sbjct: 100 HENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYG 251
+G+ ++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T
Sbjct: 155 RGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 252 YAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
Y APE + KS D++S G +L EMLS R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 93/210 (44%), Gaps = 21/210 (10%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE---WLAEVNYLGQ 134
+LG+G FG V + TG A+K L ++ E L E L
Sbjct: 157 KLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 135 LYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
HP L L Y + RL V E+ G L HL R + + + ++
Sbjct: 208 SRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV----S 262
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
+ +LH +E V+YRD K N++LD + + K++DFGL K+G D + + T GT Y
Sbjct: 263 ALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FCGTPEYL 319
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
APE L D + GVV+ EM+ GR
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE---WLAEVNYLGQL 135
+LG+G FG V + TG A+K L ++ E L E L
Sbjct: 155 LLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 136 YHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
HP L L Y + RL V E+ G L HL R + + + ++
Sbjct: 206 RHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV----SA 260
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAA 254
+ +LH +E V+YRD K N++LD + + K++DFGL K+G D + + T GT Y A
Sbjct: 261 LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FCGTPEYLA 317
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
PE L D + GVV+ EM+ GR
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+GGF F E S A TK I K L Q K + E++ L H +
Sbjct: 29 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQH 82
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V G+ ++D +V E R SL RR + +P + ++ LG +LH
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 138
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLA-KDGPTGDQSHVSTRVMGTYGYAAPEYL 258
+VI+RD K N+ L+ + K+ DFGLA K G++ + GT Y APE L
Sbjct: 139 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVL 193
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGR 283
+ + + DV+S G ++ +L G+
Sbjct: 194 SKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 21/168 (12%)
Query: 122 HKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSW 181
H+E E++ L L HPN++KL + + LV EF G L + R + + +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 182 NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTN---YNAKLSDFGL----AKDG 234
N+ ++ G+ +LH + +++RD K NILL+ N K+ DFGL +KD
Sbjct: 150 NIMKQI----LSGICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY 203
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
D+ +GT Y APE L + K DV+S GV++ +L G
Sbjct: 204 KLRDR-------LGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCG 243
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWL-AEVNYLGQLYHP 138
LG G FG V ++E S +G+ +K +N+D Q E + AE+ L L HP
Sbjct: 30 LGSGAFGDVH--LVEERS-------SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 139 NLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
N++K+ ED H + +V E G L + + + LS ++ +A+
Sbjct: 81 NIIKIFE-VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 198 LHGAETKVIYRDFKTSNILL-DTNYNA--KLSDFGLAKDGPTGDQSHVSTRVMGTYGYAA 254
H V+++D K NIL DT+ ++ K+ DFGLA+ + + ST GT Y A
Sbjct: 140 FHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMA 194
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSG 282
PE +T K D++S GVV+ +L+G
Sbjct: 195 PEVFKRD-VTFKCDIWSAGVVMYFLLTG 221
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 37/232 (15%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE-WLAEV 129
+F P LG GGFG VF K +D+ ++A +KR+ + +E + EV
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYA-----------IKRIRLPNRELAREKVMREV 54
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSL--ENHLFRRGSY---------FQP 178
L +L HP +V+ LE + + P+ L + L R+ + +
Sbjct: 55 KALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE 114
Query: 179 LSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGL--AKDGPT 236
++ L + L A+ V FLH +++RD K SNI + K+ DFGL A D
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHSK--GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 237 GDQSHVS--------TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEML 280
+Q+ ++ T +GT Y +PE + + K D++S G++L E+L
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+GGF F E S A TK I K L Q K + E++ L H +
Sbjct: 25 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQH 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V G+ ++D +V E R SL RR + +P + ++ LG +LH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 134
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLA-KDGPTGDQSHVSTRVMGTYGYAAPEYL 258
+VI+RD K N+ L+ + K+ DFGLA K G++ + GT Y APE L
Sbjct: 135 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVL 189
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGR 283
+ + + DV+S G ++ +L G+
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+GGF F E S A TK I K L Q K + E++ L H +
Sbjct: 25 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQH 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V G+ ++D +V E R SL RR + +P + ++ LG +LH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 134
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLA-KDGPTGDQSHVSTRVMGTYGYAAPEYL 258
+VI+RD K N+ L+ + K+ DFGLA K G++ + GT Y APE L
Sbjct: 135 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVL 189
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSGR 283
+ + + DV+S G ++ +L G+
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK---EWLAEVNYLGQLY 136
LG G FG V I EH TG +AVK LN+ + + E+ L
Sbjct: 19 LGVGTFGKV---KIGEHQL------TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
HP+++KL +V E++ G L +++ + G + + L ++ V
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL----SAVD 125
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
+ H V++RD K N+LLD + NAK++DFGL+ G+ S G+ YAAPE
Sbjct: 126 YCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE 180
Query: 257 YLATGHLTA--KSDVYSFGVVLLEMLSGRRAVD 287
+ +G L A + D++S GV+L +L G D
Sbjct: 181 VI-SGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+GEG G V AT +G ++AVK+++ Q + EV + H N
Sbjct: 159 IGEGSTGIVC---------IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V++ L D +V EF+ G+L + + + ++ V L + ++ LH
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 264
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 265 A--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 320
Query: 260 TGHLTAKSDVYSFGVVLLEMLSG 282
+ D++S G++++EM+ G
Sbjct: 321 RLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH--KEWLAEVN 130
N+R +G+G F V + H TG +AVK +++ ++ EV
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+ L HPN+VKL + LV E+ G + ++L G R+K
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----------RMKEKEA 115
Query: 191 AAK------GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
AK V + H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 116 RAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-- 171
Query: 245 RVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKP 303
G+ YAAPE + + + DV+S GV+L ++SG + P NL E +
Sbjct: 172 -FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRER 224
Query: 304 YLASKRKI 311
L K +I
Sbjct: 225 VLRGKYRI 232
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE--- 124
K +F +LG+G FG V + TG A+K L ++ E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 54
Query: 125 WLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNL 183
+ E L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 55 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 113
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVS 243
++ + +LH + V+YRD K N++LD + + K++DFGL K+G D + +
Sbjct: 114 GAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 166
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
T GT Y APE L D + GVV+ EM+ GR
Sbjct: 167 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 27/250 (10%)
Query: 65 SDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQ--GH 122
SD + N+R +G+G F V + H TG +A+K +++
Sbjct: 5 SDEQPHIGNYRLLKTIGKGNFAKV---KLARHIL------TGREVAIKIIDKTQLNPTSL 55
Query: 123 KEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWN 182
++ EV + L HPN+VKL + L+ E+ G + ++L G + + +
Sbjct: 56 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 115
Query: 183 LRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHV 242
++ V + H + ++++RD K N+LLD + N K++DFG + + G +
Sbjct: 116 KFRQIV----SAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT 169
Query: 243 STRVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWA 301
G+ YAAPE + + + DV+S GV+L ++SG + P NL E
Sbjct: 170 ---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELR 220
Query: 302 KPYLASKRKI 311
+ L K +I
Sbjct: 221 ERVLRGKYRI 230
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE- 124
D + F +LG+G FG V + TG A+K L ++ E
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEV 54
Query: 125 --WLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSW 181
L E L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 55 AHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 113
Query: 182 NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH 241
++ + +LH +E V+YRD K N++LD + + K++DFGL K+G +
Sbjct: 114 FYGAEIV----SALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT- 167
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
GT Y APE L D + GVV+ EM+ GR
Sbjct: 168 -MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH--KEWLAEVN 130
N+R +G+G F V + H TG +AVK +++ ++ EV
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+ L HPN+VKL + LV E+ G + ++L G R+K
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----------RMKEKEA 115
Query: 191 AAK------GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
AK V + H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 116 RAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-- 171
Query: 245 RVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKP 303
G+ YAAPE + + + DV+S GV+L ++SG + P NL E +
Sbjct: 172 -FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRER 224
Query: 304 YLASKRKI 311
L K +I
Sbjct: 225 VLRGKYRI 232
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW-- 125
K +F +LG+G FG V + TG A+K L ++ E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 126 -LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNL 183
+ E L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVS 243
++ + +LH + V+YRD K N++LD + + K++DFGL K+G D + +
Sbjct: 111 GAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 163
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
T GT Y APE L D + GVV+ EM+ GR
Sbjct: 164 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 137 HPNLVKLVGYCLEDDHRLL-VYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
HP LV L C + + RL V E++ G L H+ R+ + + +++L +
Sbjct: 112 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----L 166
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAA 254
+LH E +IYRD K N+LLD+ + KL+D+G+ K+G GD ++ GT Y A
Sbjct: 167 NYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTPNYIA 221
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVD 287
PE L D ++ GV++ EM++GR D
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNY 131
+F S LG G G V K +P +G+++A K ++ + + + E+
Sbjct: 17 DFERISELGAGNGGVVTK--------VQHRP-SGLIMARKLIHLEIKPAIRNQIIRELQV 67
Query: 132 LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
L + P +V G D + E M GSL+ L + + + KV++
Sbjct: 68 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KEAKRIPEEILGKVSIAV 123
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
+G+A+L + ++++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 124 LRGLAYLR-EKHQIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 178
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAV 286
Y APE L H + +SD++S G+ L+E+ GR +
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 137 HPNLVKLVGYCLEDDHRLL-VYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
HP LV L C + + RL V E++ G L H+ R+ + + +++L +
Sbjct: 80 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----L 134
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAA 254
+LH E +IYRD K N+LLD+ + KL+D+G+ K+G GD ++ GT Y A
Sbjct: 135 NYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIA 189
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVD 287
PE L D ++ GV++ EM++GR D
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE--- 124
K +F +LG+G FG V + TG A+K L ++ E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 125 WLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNL 183
+ E L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVS 243
++ + +LH + V+YRD K N++LD + + K++DFGL K+G D + +
Sbjct: 111 GAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 163
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
T GT Y APE L D + GVV+ EM+ GR
Sbjct: 164 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+GEG G V AT +G ++AVK+++ Q + EV + H N
Sbjct: 37 IGEGSTGIVC---------IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V++ L D +V EF+ G+L + + + ++ V L + ++ LH
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 142
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 143 A--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 198
Query: 260 TGHLTAKSDVYSFGVVLLEMLSG 282
+ D++S G++++EM+ G
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+GEG G V AT +G ++AVK+++ Q + EV + H N
Sbjct: 39 IGEGSTGIVC---------IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V++ L D +V EF+ G+L + + + ++ V L + ++ LH
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 144
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 145 A--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 200
Query: 260 TGHLTAKSDVYSFGVVLLEMLSG 282
+ D++S G++++EM+ G
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 137 HPNLVKLVGYCLEDDHRLL-VYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
HP LV L C + + RL V E++ G L H+ R+ + + +++L +
Sbjct: 65 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----L 119
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAA 254
+LH E +IYRD K N+LLD+ + KL+D+G+ K+G GD ++ GT Y A
Sbjct: 120 NYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIA 174
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVD 287
PE L D ++ GV++ EM++GR D
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 27/252 (10%)
Query: 63 SFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQ-- 120
S +D + N+R +G+G F V + H TG +A+K +++
Sbjct: 6 SCADEQPHIGNYRLLKTIGKGNFAKV---KLARHIL------TGREVAIKIIDKTQLNPT 56
Query: 121 GHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLS 180
++ EV + L HPN+VKL + L+ E+ G + ++L G + +
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA 116
Query: 181 WNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQS 240
+ ++ V + H + ++++RD K N+LLD + N K++DFG + + G +
Sbjct: 117 RSKFRQIV----SAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170
Query: 241 HVSTRVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVE 299
G YAAPE + + + DV+S GV+L ++SG + P NL E
Sbjct: 171 DA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 221
Query: 300 WAKPYLASKRKI 311
+ L K +I
Sbjct: 222 LRERVLRGKYRI 233
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 39/248 (15%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH--KEWLAEVN 130
N+R +G+G F V + H TG +AVK +++ ++ EV
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+ L HPN+VKL + LV E+ G + ++L G R+K
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----------RMKEKEA 115
Query: 191 AAK------GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
AK V + H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 116 RAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA-- 171
Query: 245 RVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKP 303
G YAAPE + + + DV+S GV+L ++SG + P NL E +
Sbjct: 172 -FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRER 224
Query: 304 YLASKRKI 311
L K +I
Sbjct: 225 VLRGKYRI 232
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 137 HPNLVKLVGYCLEDDHRLL-VYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
HP LV L C + + RL V E++ G L H+ R+ + + +++L +
Sbjct: 69 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----L 123
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAA 254
+LH E +IYRD K N+LLD+ + KL+D+G+ K+G GD ++ GT Y A
Sbjct: 124 NYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIA 178
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVD 287
PE L D ++ GV++ EM++GR D
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 109 IAVKRLNQDGFQ-GHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLEN 167
+A+KR+N + Q E L E+ + Q +HPN+V + D LV + + GS+ +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 168 ---HLFRRGSYFQ-PLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA 223
H+ +G + L + + +G+ +LH + I+RD K NILL + +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSV 155
Query: 224 KLSDFGLAKDGPTG---DQSHVSTRVMGTYGYAAPEYLATGH-LTAKSDVYSFGVVLLEM 279
+++DFG++ TG ++ V +GT + APE + K+D++SFG+ +E+
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 280 LSG 282
+G
Sbjct: 216 ATG 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 109 IAVKRLNQDGFQ-GHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLEN 167
+A+KR+N + Q E L E+ + Q +HPN+V + D LV + + GS+ +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 168 ---HLFRRGSYFQ-PLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA 223
H+ +G + L + + +G+ +LH + I+RD K NILL + +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSV 160
Query: 224 KLSDFGLAKDGPTG---DQSHVSTRVMGTYGYAAPEYLATGH-LTAKSDVYSFGVVLLEM 279
+++DFG++ TG ++ V +GT + APE + K+D++SFG+ +E+
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 280 LSG 282
+G
Sbjct: 221 ATG 223
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 35/246 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
N+R +G+G F V + H + +I +LN Q + EV +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHILTGKEVAV-RIIDKTQLNSSSLQ---KLFREVRIM 67
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
L HPN+VKL + LV E+ G + ++L G R+K A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----------RMKEKEARA 117
Query: 193 K------GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
K V + H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 118 KFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEF 172
Query: 247 MGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL 305
G+ YAAPE + + + DV+S GV+L ++SG + P NL E + L
Sbjct: 173 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL 226
Query: 306 ASKRKI 311
K +I
Sbjct: 227 RGKYRI 232
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 35/246 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
N+R +G+G F V + H + +I +LN Q + EV +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHILTGKEVAV-RIIDKTQLNSSSLQ---KLFREVRIM 67
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
L HPN+VKL + LV E+ G + ++L G R+K A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----------RMKEKEARA 117
Query: 193 K------GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
K V + H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 118 KFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---F 172
Query: 247 MGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL 305
G+ YAAPE + + + DV+S GV+L ++SG + P NL E + L
Sbjct: 173 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL 226
Query: 306 ASKRKI 311
K +I
Sbjct: 227 RGKYRI 232
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE--WLAEVNYLGQLY 136
+LG+G FG V K T AVK +N+ + L EV L +L
Sbjct: 29 MLGKGSFGEVLK---------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
HPN++KL + +V E G L + + +R + S + ++ G+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRF----SEHDAARIIKQVFSGIT 135
Query: 197 FLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
++H + +++RD K NILL++ + + K+ DFGL+ Q+ +GT Y
Sbjct: 136 YMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYI 190
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE L G K DV+S GV+L +LSG
Sbjct: 191 APEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+GEG G V AT +G ++AVK+++ Q + EV + H N
Sbjct: 28 IGEGSTGIVC---------IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V++ L D +V EF+ G+L + + + ++ V L + ++ LH
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 133
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 134 A--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 189
Query: 260 TGHLTAKSDVYSFGVVLLEMLSG 282
+ D++S G++++EM+ G
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+GEG G V AT +G ++AVK+++ Q + EV + H N
Sbjct: 82 IGEGSTGIVC---------IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V++ L D +V EF+ G+L + + + ++ V L + ++ LH
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 187
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 188 A--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 243
Query: 260 TGHLTAKSDVYSFGVVLLEMLSG 282
+ D++S G++++EM+ G
Sbjct: 244 RLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW 125
D +T R R LG+GGF + E + TK + K + Q K
Sbjct: 37 DPRTMKRYMR-GRFLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEK-M 89
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLS-WNLR 184
E+ L +P++V G+ +DD +V E R SL RR + +P + + +R
Sbjct: 90 STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLA-KDGPTGDQSHVS 243
+ +GV +LH +VI+RD K N+ L+ + + K+ DFGLA K G++
Sbjct: 150 QTI-----QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT- 201
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKP 303
+ GT Y APE L + + D++S G +L +L G +P E + +
Sbjct: 202 --LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL----- 247
Query: 304 YLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVT 354
K RI N + A+ L R L + RP +AE++T
Sbjct: 248 ----KETYIRIKKNEYSVPRHINPV--ASALIRRMLHADPTLRPSVAELLT 292
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + + +A+K+++ Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-CQHLSNDHICYFLYQILRGLK 142
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 143 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 92/220 (41%), Gaps = 21/220 (9%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE--- 124
+ F +LG+G FG V + TG A+K L ++ E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAH 54
Query: 125 WLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNL 183
L E L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 55 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 113
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVS 243
++ + +LH +E V+YRD K N++LD + + K++DFGL K+G +
Sbjct: 114 GAEIV----SALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--M 166
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
GT Y APE L D + GVV+ EM+ GR
Sbjct: 167 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 27/242 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH--KEWLAEVN 130
N+R +G+G F V A TG +AVK +++ ++ EV
Sbjct: 8 NYRLLKTIGKGNFAKVK---------LARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR 58
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
+ L HPN+VKL + LV E+ G + ++L G + + + + +
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-WMKEKEARAKFRQIVS 117
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
A V + H + +++RD K N+LLD + N K++DFG + + G++ G+
Sbjct: 118 A---VQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSP 169
Query: 251 GYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKR 309
YAAPE + + + DV+S GV+L ++SG + P NL E + L K
Sbjct: 170 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKY 223
Query: 310 KI 311
+I
Sbjct: 224 RI 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 92/220 (41%), Gaps = 21/220 (9%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE--- 124
+ F +LG+G FG V + TG A+K L ++ E
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAH 55
Query: 125 WLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNL 183
L E L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 56 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 114
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVS 243
++ + +LH +E V+YRD K N++LD + + K++DFGL K+G +
Sbjct: 115 GAEIV----SALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--M 167
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
GT Y APE L D + GVV+ EM+ GR
Sbjct: 168 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+GEG G V AT +G ++AVK+++ Q + EV + H N
Sbjct: 32 IGEGSTGIVC---------IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V++ L D +V EF+ G+L + + + ++ V L + ++ LH
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 137
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLA 259
VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 138 A--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 193
Query: 260 TGHLTAKSDVYSFGVVLLEMLSG 282
+ D++S G++++EM+ G
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 25/237 (10%)
Query: 54 LRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVF----KGWIDEHSFAATKPGTGMVI 109
LR+ NL + K NF VLG G +G VF D A K I
Sbjct: 39 LRTANLTGHA---EKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATI 95
Query: 110 AVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENH 168
K + + ++ L + P LV L Y + + +L L+ +++ G L H
Sbjct: 96 VQKAKTTEHTRTERQVLEHIRQ-----SPFLVTL-HYAFQTETKLHLILDYINGGELFTH 149
Query: 169 LFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDF 228
L +R + + +++ +G +A H + +IYRD K NILLD+N + L+DF
Sbjct: 150 LSQRERFTEH-----EVQIYVGEIV-LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDF 203
Query: 229 GLAKDGPTGDQSHVSTRVMGTYGYAAPEYL---ATGHLTAKSDVYSFGVVLLEMLSG 282
GL+K+ D++ + GT Y AP+ + +GH A D +S GV++ E+L+G
Sbjct: 204 GLSKEF-VADETERAYDFCGTIEYMAPDIVRGGDSGHDKA-VDWWSLGVLMYELLTG 258
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 140
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 141 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 44/230 (19%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH---KEWLAEVNYLGQLY 136
LG+G +G V+K ID TG V+AVK++ D FQ + E+ L +L
Sbjct: 17 LGKGAYGIVWKS-IDRR--------TGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELS 66
Query: 137 -HPNLVKLVGYCLEDDHR--LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
H N+V L+ D+ R LV+++M + H R + +P+ + V K
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVH---KQYVVYQLIK 120
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT----------------- 236
+ +LH +++RD K SNILL+ + K++DFGL++
Sbjct: 121 VIKYLHSG--GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 237 --GDQSHVSTRVMGTYGYAAPEY-LATGHLTAKSDVYSFGVVLLEMLSGR 283
D + T + T Y APE L + T D++S G +L E+L G+
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH--KEWLAEVNYLGQL 135
+LG+G FG V K T AVK +N+ + L EV L +L
Sbjct: 28 CMLGKGSFGEVLK---------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
HPN++KL + +V E G L + + +R + S + ++ G+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRF----SEHDAARIIKQVFSGI 134
Query: 196 AFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
++H + +++RD K NILL++ + + K+ DFGL+ Q+ +GT Y
Sbjct: 135 TYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYY 189
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE L G K DV+S GV+L +LSG
Sbjct: 190 IAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 94/222 (42%), Gaps = 22/222 (9%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE- 124
D K +F +LG+G FG V + TG A+K L ++ E
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEV 54
Query: 125 --WLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSW 181
+ E L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 55 AHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 113
Query: 182 NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH 241
++ + +LH + V+YRD K N++LD + + K++DFGL K+G + +
Sbjct: 114 FYGAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT- 166
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
GT Y APE L D + GVV+ EM+ GR
Sbjct: 167 -MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 32/239 (13%)
Query: 58 NLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQD 117
+L S L+ F ++G G +G V+KG TG + A+K ++
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG---------RHVKTGQLAAIKVMDVT 60
Query: 118 GFQGHKEWLAEVNYLGQL-YHPNLVKLVGYCLE------DDHRLLVYEFMPRGSLENHLF 170
G + +E E+N L + +H N+ G ++ DD LV EF GS+ + +
Sbjct: 61 GDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI- 118
Query: 171 RRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGL 230
+ + L + +G++ LH + KVI+RD K N+LL N KL DFG+
Sbjct: 119 -KNTKGNTLKEEWIAYICREILRGLSHLH--QHKVIHRDIKGQNVLLTENAEVKLVDFGV 175
Query: 231 AK--DGPTGDQSHVSTRVMGTYGYAAPEYLATGH-----LTAKSDVYSFGVVLLEMLSG 282
+ D G ++ +GT + APE +A KSD++S G+ +EM G
Sbjct: 176 SAQLDRTVGRRN----TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE--WLAEVNYLGQL 135
+LG+G FG V K T AVK +N+ + L EV L +L
Sbjct: 28 CMLGKGSFGEVLK---------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 136 YHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
HPN++KL + +V E G L + + +R + S + ++ G+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRF----SEHDAARIIKQVFSGI 134
Query: 196 AFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
++H + +++RD K NILL++ + + K+ DFGL+ Q+ +GT Y
Sbjct: 135 TYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYY 189
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE L G K DV+S GV+L +LSG
Sbjct: 190 IAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 158
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 159 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 37 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 87
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 146
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 147 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE-WLAEVNYLGQLY 136
S +GEG +G V + + + + +A+K+++ Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 142
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 143 YIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + + +A+K+++ Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 142
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 143 YIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + + +A+K+++ Q + + L E+ L +
Sbjct: 34 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 143
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 144 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + + +A+K+++ Q + + L E+ L +
Sbjct: 35 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 85
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 144
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 145 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + + +A+K+++ Q + + L E+ L +
Sbjct: 26 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 76
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 135
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 136 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + + +A+K+++ Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 142
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 143 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 27 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 136
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 137 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW 125
D +T R R LG+GGF + E + TK + K + Q K
Sbjct: 37 DPRTMKRYMR-GRFLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEK-M 89
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLS-WNLR 184
E+ L +P++V G+ +DD +V E R SL RR + +P + + +R
Sbjct: 90 STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLA-KDGPTGDQSHVS 243
+ +GV +LH +VI+RD K N+ L+ + + K+ DFGLA K G++
Sbjct: 150 QTI-----QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---K 199
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKP 303
+ GT Y APE L + + D++S G +L +L G +P E + +
Sbjct: 200 KXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL----- 247
Query: 304 YLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVT 354
K RI N + A+ L R L + RP +AE++T
Sbjct: 248 ----KETYIRIKKNEYSVPRHINPV--ASALIRRMLHADPTLRPSVAELLT 292
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 27 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 136
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 137 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW-- 125
K +F+ +LGEG F +V A + T A+K L + +
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPY 55
Query: 126 -LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNL 183
E + + +L HP VKL + +DD +L + G L ++ + GS+ + +
Sbjct: 56 VTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT--- 111
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHV 242
R A + +LHG +I+RD K NILL+ + + +++DFG AK P Q+
Sbjct: 112 RFYTA-EIVSALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 168
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ V GT Y +PE L SD+++ G ++ ++++G
Sbjct: 169 NXFV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 30/238 (12%)
Query: 74 FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLG 133
F+ + + G+G FG+V G + TGM +A+K++ QD ++E L + L
Sbjct: 25 FQVERMAGQGTFGTVQLG---------KEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLA 74
Query: 134 QLYHPNLVKLVGYCL---EDDHRLL----VYEFMP---RGSLENHLFRRGSYFQPLSWNL 183
L+HPN+V+L Y E D R + V E++P N+ +RR P+ +
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNY-YRRQVAPPPILIKV 133
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILL-DTNYNAKLSDFGLAKDGPTGDQSHV 242
L + + LH V +RD K N+L+ + + KL DFG AK S
Sbjct: 134 FL---FQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK---KLSPSEP 187
Query: 243 STRVMGTYGYAAPEYL-ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGE-HNLV 298
+ + + Y APE + H T D++S G + EM+ G + +G+ H +V
Sbjct: 188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW-- 125
K +F+ +LGEG F +V A + T A+K L + +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPY 56
Query: 126 -LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNL 183
E + + +L HP VKL + +DD +L + G L ++ + GS+ + +
Sbjct: 57 VTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT--- 112
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHV 242
R A + +LHG +I+RD K NILL+ + + +++DFG AK P Q+
Sbjct: 113 RFYTA-EIVSALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 169
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ V GT Y +PE L SD+++ G ++ ++++G
Sbjct: 170 NXFV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 22/216 (10%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAE 128
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 32 EDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRE 82
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 83 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI 141
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRV 246
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ ++ V
Sbjct: 142 V----SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L + SD+++ G ++ ++++G
Sbjct: 196 -GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE--- 124
K +F +LG+G FG V + TG A+K L ++ E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 125 WLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNL 183
+ E L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVS 243
++ + +LH + V+YRD K N++LD + + K++DFGL K+G + +
Sbjct: 111 GAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--M 162
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
GT Y APE L D + GVV+ EM+ GR
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW 125
D +T R R LG+GGF + E + TK + K + Q K
Sbjct: 37 DPRTMKRYMR-GRFLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEK-M 89
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLS-WNLR 184
E+ L +P++V G+ +DD +V E R SL RR + +P + + +R
Sbjct: 90 STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLA-KDGPTGDQSHVS 243
+ +GV +LH +VI+RD K N+ L+ + + K+ DFGLA K G++
Sbjct: 150 QTI-----QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---K 199
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKP 303
+ GT Y APE L + + D++S G +L +L G +P E + +
Sbjct: 200 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL----- 247
Query: 304 YLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVT 354
K RI N + A+ L R L + RP +AE++T
Sbjct: 248 ----KETYIRIKKNEYSVPRHINPV--ASALIRRMLHADPTLRPSVAELLT 292
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW-- 125
K +F +LG+G FG V + TG A+K L ++ E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 126 -LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNL 183
+ E L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVS 243
++ + +LH + V+YRD K N++LD + + K++DFGL K+G + +
Sbjct: 111 GAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--M 162
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
GT Y APE L D + GVV+ EM+ GR
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW-- 125
K +F +LG+G FG V + TG A+K L ++ E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 126 -LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNL 183
+ E L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVS 243
++ + +LH + V+YRD K N++LD + + K++DFGL K+G + +
Sbjct: 111 GAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--M 162
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
GT Y APE L D + GVV+ EM+ GR
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW-- 125
K +F+ +LGEG F +V A + T A+K L + +
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPY 53
Query: 126 -LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNL 183
E + + +L HP VKL + +DD +L + G L ++ + GS+ + +
Sbjct: 54 VTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT--- 109
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHV 242
R A + +LHG +I+RD K NILL+ + + +++DFG AK P Q+
Sbjct: 110 RFYTA-EIVSALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 166
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ V GT Y +PE L SD+++ G ++ ++++G
Sbjct: 167 NXFV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAE 128
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 33 EDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRE 83
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 84 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRV 246
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ ++ V
Sbjct: 143 V----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 197 -GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW-- 125
K +F+ +LGEG F +V A + T A+K L + +
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPY 54
Query: 126 -LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNL 183
E + + +L HP VKL + +DD +L + G L ++ + GS+ + +
Sbjct: 55 VTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT--- 110
Query: 184 RLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHV 242
R A + +LHG +I+RD K NILL+ + + +++DFG AK P Q+
Sbjct: 111 RFYTA-EIVSALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 167
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ V GT Y +PE L SD+++ G ++ ++++G
Sbjct: 168 NXFV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 27/190 (14%)
Query: 119 FQGHKEWLAEVNYLGQ--LYHPNLVKLV-----GYCLEDDHRLLVYEFMPRGSLENHLFR 171
Q + W +E + H NL++ + G LE + L+ F +GSL ++L
Sbjct: 48 LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVE-LWLITAFHDKGSLTDYL-- 104
Query: 172 RGSYFQPLSWNLRLKVALGAAKGVAFLH---------GAETKVIYRDFKTSNILLDTNYN 222
+G+ ++WN VA ++G+++LH G + + +RDFK+ N+LL ++
Sbjct: 105 KGNI---ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLT 161
Query: 223 AKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATG-----HLTAKSDVYSFGVVLL 277
A L+DFGLA G + +GT Y APE L + D+Y+ G+VL
Sbjct: 162 AVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLW 221
Query: 278 EMLSGRRAVD 287
E++S +A D
Sbjct: 222 ELVSRCKAAD 231
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 91/215 (42%), Gaps = 30/215 (13%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQD------GFQG---HKEWLAEV 129
VLG GGFG VF A TG + A K+LN+ G+QG K+ LA+V
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
H + + Y E L LV M G + H++ +
Sbjct: 243 -------HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
G+ LH + +IYRD K N+LLD + N ++SD GLA + G + G
Sbjct: 296 AQIVSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAG 351
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
T G+ APE L D ++ GV L EM++ R
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 140
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 141 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW 125
D +T R R LG+GGF + E + TK + K + Q K
Sbjct: 21 DPRTMKRYMR-GRFLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEK-M 73
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLS-WNLR 184
E+ L +P++V G+ +DD +V E R SL RR + +P + + +R
Sbjct: 74 STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 133
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLA-KDGPTGDQSHVS 243
+ +GV +LH +VI+RD K N+ L+ + + K+ DFGLA K G++
Sbjct: 134 QTI-----QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---K 183
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKP 303
+ GT Y APE L + + D++S G +L +L G +P E + +
Sbjct: 184 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL----- 231
Query: 304 YLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVT 354
K RI N + A+ L R L + RP +AE++T
Sbjct: 232 ----KETYIRIKKNEYSVPRHINPV--ASALIRRMLHADPTLRPSVAELLT 276
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 91/215 (42%), Gaps = 30/215 (13%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQD------GFQG---HKEWLAEV 129
VLG GGFG VF A TG + A K+LN+ G+QG K+ LA+V
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
H + + Y E L LV M G + H++ +
Sbjct: 243 -------HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
G+ LH + +IYRD K N+LLD + N ++SD GLA + G + G
Sbjct: 296 AQIVSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAG 351
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
T G+ APE L D ++ GV L EM++ R
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 91/215 (42%), Gaps = 30/215 (13%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQD------GFQG---HKEWLAEV 129
VLG GGFG VF A TG + A K+LN+ G+QG K+ LA+V
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
H + + Y E L LV M G + H++ +
Sbjct: 243 -------HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
G+ LH + +IYRD K N+LLD + N ++SD GLA + G + G
Sbjct: 296 AQIVSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAG 351
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
T G+ APE L D ++ GV L EM++ R
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAE 128
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 29 EDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRE 79
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + R
Sbjct: 80 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYT 135
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRV 246
A + +LHG +I+RD K NILL+ + + +++DFG AK P Q+ ++ V
Sbjct: 136 A-EIVSALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 193 -GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 91/215 (42%), Gaps = 30/215 (13%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQD------GFQG---HKEWLAEV 129
VLG GGFG VF A TG + A K+LN+ G+QG K+ LA+V
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
H + + Y E L LV M G + H++ +
Sbjct: 243 -------HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
G+ LH + +IYRD K N+LLD + N ++SD GLA + G + G
Sbjct: 296 AQIVSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAG 351
Query: 249 TYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
T G+ APE L D ++ GV L EM++ R
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+++++ Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVR---------VAIRKISPFEHQTYCQRTLREIKILLRFR 83
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 142
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 143 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 31 DFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRVM 247
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 141 ----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV- 193
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVNYLGQLYH 137
+GEG FG V +G + M +A+K N +++L E + Q H
Sbjct: 17 CIGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P++VKL+G + ++ ++ E G L + L R S +L + A
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK-----FSLDLASLILYAYQLSTAL 124
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
+ + ++RD N+L+ +N KL DFGL++ S + + APE
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI-KWMAPES 183
Query: 258 LATGHLTAKSDVYSFGVVLLEML 280
+ T+ SDV+ FGV + E+L
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
+LG G FG V K + TG+ +A K + G + +E E++ + QL H
Sbjct: 96 ILGGGRFGQVHK---------CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
NL++L + +LV E++ G L + + L L +K +G+ +
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRHM 203
Query: 199 HGAETKVIYRDFKTSNILLDTNYNA---KLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAP 255
H + +++ D K NIL N +A K+ DFGLA+ ++ V+ GT + AP
Sbjct: 204 H--QMYILHLDLKPENILC-VNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAP 257
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLSG 282
E + ++ +D++S GV+ +LSG
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + + +A+K+++ Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 140
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + T + T Y AP
Sbjct: 141 YIHSA--NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 33 DFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRVM 247
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 143 ----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 195
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 28/214 (13%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKR--LNQDGFQGHKEWLAEVNYLGQLYH 137
+GEG +G+VFK A T ++A+KR L+ D L E+ L +L H
Sbjct: 10 IGEGTYGTVFK---------AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA----LGAAK 193
N+V+L D LV+EF + YF + +L ++ K
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQD--------LKKYFDSCNGDLDPEIVKSFLFQLLK 112
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ F H V++RD K N+L++ N KL+DFGLA+ G + + T Y
Sbjct: 113 GLGFCHS--RNVLHRDLKPQNLLINRNGELKLADFGLAR--AFGIPVRCYSAEVVTLWYR 168
Query: 254 APEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAV 286
P+ L L + S D++S G + E+ + R +
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLYHP 138
+GEG +G V + +H +A+K+++ Q + + L E+ L + H
Sbjct: 51 IGEGAYGMVSSAY--DHVRKTR-------VAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
N++ + + ++ + +E L++ Q LS + +G+ ++
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS-QQLSNDHICYFLYQILRGLKYI 160
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAPEY 257
H A V++RD K SN+L++T + K+ DFGLA+ P D + T + T Y APE
Sbjct: 161 HSA--NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 258 LATGHLTAKS-DVYSFGVVLLEMLSGR 283
+ KS D++S G +L EMLS R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF-QGHKEWL-AEVNYLGQLYH 137
+G G +G K + G ++ K L+ + K+ L +EVN L +L H
Sbjct: 14 IGTGSYGRCQK---------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 138 PNLVKLVGYCLEDDHRLL--VYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
PN+V+ ++ + L V E+ G L + + + Q L L+V +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 196 AFLH----GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
H G T V++RD K +N+ LD N KL DFGLA+ D S T V GT
Sbjct: 125 KECHRRSDGGHT-VLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKTFV-GTPY 181
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
Y +PE + KSD++S G +L E+ +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 15 DFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRER 65
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + R A
Sbjct: 66 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA 121
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRVM 247
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 122 -EIVSALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 177
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 31 DFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRVM 247
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 141 ----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 193
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 31 DFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRVM 247
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 141 ----SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 193
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAE 128
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 32 EDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRE 82
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 83 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRV 246
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 142 V----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 196 -GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAE 128
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 32 EDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRE 82
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 83 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRV 246
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 142 V----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 196 -GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAE 128
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 33 EDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRE 83
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 84 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRV 246
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 143 V----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 197 -GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAE 128
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 32 EDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRE 82
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 83 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRV 246
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 142 V----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 196 -GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 26/248 (10%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW 125
D + + +G GGF V A TG ++A+K ++++
Sbjct: 4 DYDELLKYYELHETIGTGGFAKVK---------LACHILTGEMVAIKIMDKNTLGSDLPR 54
Query: 126 L-AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
+ E+ L L H ++ +L + +V E+ P G L +++ + LS
Sbjct: 55 IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR----LSEEET 110
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
V VA++H +RD K N+L D + KL DFGL P G++ +
Sbjct: 111 RVVFRQIVSAVAYVHS--QGYAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQ 167
Query: 245 RVMGTYGYAAPEYL-ATGHLTAKSDVYSFGVVLLEMLSGRRAVD--------KNRPSGEH 295
G+ YAAPE + +L +++DV+S G++L ++ G D K G++
Sbjct: 168 TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKY 227
Query: 296 NLVEWAKP 303
++ +W P
Sbjct: 228 DVPKWLSP 235
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAE 128
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 35 EDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRE 85
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 86 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 144
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRV 246
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 145 V----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 199 -GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAE 128
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 29 EDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRE 79
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + R
Sbjct: 80 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYT 135
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRV 246
A + +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 136 A-EIVSALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 193 -GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 128 EVNYLGQLYHPNLVKLVGY----CLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNL 183
EV L + H N+++ +G D L+ F +GSL + L +SWN
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNE 122
Query: 184 RLKVALGAAKGVAFLH--------GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGP 235
+A A+G+A+LH G + + +RD K+ N+LL N A ++DFGLA
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182
Query: 236 TGDQSHVSTRVMGTYGYAAPEYLATG-----HLTAKSDVYSFGVVLLEMLSGRRAVD 287
G + + +GT Y APE L + D+Y+ G+VL E+ S A D
Sbjct: 183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Query: 155 LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSN 214
+V E++ +L + + G P++ ++V A + + F H + +I+RD K +N
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPAN 146
Query: 215 ILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFG 273
IL+ K+ DFG+A+ +G+ + V+GT Y +PE + A+SDVYS G
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 274 VVLLEMLSG 282
VL E+L+G
Sbjct: 207 CVLYEVLTG 215
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF-QGHKEWL-AEVNYLGQLYH 137
+G G +G K + G ++ K L+ + K+ L +EVN L +L H
Sbjct: 14 IGTGSYGRCQK---------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 138 PNLVKLVGYCLEDDHRLL--VYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
PN+V+ ++ + L V E+ G L + + + Q L L+V +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 196 AFLH----GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
H G T V++RD K +N+ LD N KL DFGLA+ + +GT
Sbjct: 125 KECHRRSDGGHT-VLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDEDFAKEFVGTPY 181
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
Y +PE + KSD++S G +L E+ +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVI-----AVKRLNQDGFQ 120
DL+ ++ V+G G FG V + H +T+ M + +KR + F
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEV---QLVRHK--STRKVYAMKLLSKFEMIKRSDSAFFW 117
Query: 121 GHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPL 179
++ +A N P +V+L Y +DD L +V E+MP G L N + +Y P
Sbjct: 118 EERDIMAFAN------SPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPE 167
Query: 180 SW----NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGP 235
W + +AL A + F+H RD K N+LLD + + KL+DFG
Sbjct: 168 KWARFYTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMN 219
Query: 236 TGDQSHVSTRVMGTYGYAAPEYLAT----GHLTAKSDVYSFGVVLLEMLSG 282
T V GT Y +PE L + G+ + D +S GV L EML G
Sbjct: 220 KEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAE 128
+F+ +LGEG F +V A + T A+K L + + E
Sbjct: 32 EDFKFGKILGEGSFSTVV---------LARELATSREYAIKILEKRHIIKENKVPYVTRE 82
Query: 129 VNYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 83 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRV 246
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 142 V----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 196 -GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQD-GFQGHKEWLAEVNYLGQLYH- 137
+G G +GSV K KP +G ++AVKR+ + K+ L +++ + +
Sbjct: 30 IGRGAYGSVNK--------MVHKP-SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC 80
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P +V+ G + + E M + + + + + K+ L K +
Sbjct: 81 PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
L K+I+RD K SNILLD + N KL DFG++ G D S TR G Y APE
Sbjct: 141 LK-ENLKIIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVD-SIAKTRDAGCRPYMAPER 196
Query: 258 L----ATGHLTAKSDVYSFGVVLLEMLSGR 283
+ + +SDV+S G+ L E+ +GR
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVI-----AVKRLNQDGFQ 120
DL+ ++ V+G G FG V + H +T+ M + +KR + F
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV---QLVRHK--STRKVYAMKLLSKFEMIKRSDSAFFW 122
Query: 121 GHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPL 179
++ +A N P +V+L Y +DD L +V E+MP G L N + +Y P
Sbjct: 123 EERDIMAFAN------SPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPE 172
Query: 180 SW----NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGP 235
W + +AL A + F+H RD K N+LLD + + KL+DFG
Sbjct: 173 KWARFYTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMN 224
Query: 236 TGDQSHVSTRVMGTYGYAAPEYLAT----GHLTAKSDVYSFGVVLLEMLSG 282
T V GT Y +PE L + G+ + D +S GV L EML G
Sbjct: 225 KEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVI-----AVKRLNQDGFQ 120
DL+ ++ V+G G FG V + H +T+ M + +KR + F
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV---QLVRHK--STRKVYAMKLLSKFEMIKRSDSAFFW 122
Query: 121 GHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPL 179
++ +A N P +V+L Y +DD L +V E+MP G L N + +Y P
Sbjct: 123 EERDIMAFAN------SPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPE 172
Query: 180 SW----NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGP 235
W + +AL A + F+H RD K N+LLD + + KL+DFG
Sbjct: 173 KWARFYTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMN 224
Query: 236 TGDQSHVSTRVMGTYGYAAPEYLAT----GHLTAKSDVYSFGVVLLEMLSG 282
T V GT Y +PE L + G+ + D +S GV L EML G
Sbjct: 225 KEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 142
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + + T Y AP
Sbjct: 143 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-KEWLAEVNYLGQLY 136
S +GEG +G V + + + +A+K+++ Q + + L E+ L +
Sbjct: 34 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N++ + + ++ + +E L++ Q LS + +G+
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 143
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG-PTGDQSHVSTRVMGTYGYAAP 255
++H A V++RD K SN+LL+T + K+ DFGLA+ P D + + T Y AP
Sbjct: 144 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 256 EYLATGHLTAKS-DVYSFGVVLLEMLSGR 283
E + KS D++S G +L EMLS R
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF-QGHKEWL-AEVNYLGQLYH 137
+G G +G K + G ++ K L+ + K+ L +EVN L +L H
Sbjct: 14 IGTGSYGRCQK---------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 138 PNLVKLVGYCLEDDHRLL--VYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
PN+V+ ++ + L V E+ G L + + + Q L L+V +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 196 AFLH----GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYG 251
H G T V++RD K +N+ LD N KL DFGLA+ + + +GT
Sbjct: 125 KECHRRSDGGHT-VLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKAFVGTPY 181
Query: 252 YAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
Y +PE + KSD++S G +L E+ +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 39/248 (15%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH--KEWLAEVN 130
N+R +G+G F V + H TG +AVK +++ ++ EV
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L HPN+VKL + LV E+ G + ++L G R K
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHG----------RXKEKEA 115
Query: 191 AAK------GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
AK V + H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 116 RAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA-- 171
Query: 245 RVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKP 303
G YAAPE + + + DV+S GV+L ++SG + P NL E +
Sbjct: 172 -FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRER 224
Query: 304 YLASKRKI 311
L K +I
Sbjct: 225 VLRGKYRI 232
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 67 LKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-QDGFQGHK-- 123
L A + + + +GEG +G VFK A G +A+KR+ Q G +G
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFK--------ARDLKNGGRFVALKRVRVQTGEEGMPLS 57
Query: 124 --EWLAEVNYLGQLYHPNLVKLVGYCL-----EDDHRLLVYEFMPRGSLENHLFRRGSYF 176
+A + +L HPN+V+L C + LV+E + + L +L +
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG 116
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT 236
P + L +G+ FLH +V++RD K NIL+ ++ KL+DFGLA+
Sbjct: 117 VPTETIKDMMFQL--LRGLDFLHSH--RVVHRDLKPQNILVTSSGQIKLADFGLAR---I 169
Query: 237 GDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEML 280
T V+ T Y APE L D++S G + EM
Sbjct: 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
+F+ +LGEG F + + A + T A+K L + + E
Sbjct: 31 DFKFGKILGEGSFST---------TVLARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRLLV-YEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ + +L HP VKL + +DD +L + G L ++ + GS+ + + ++
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRVM 247
+ +LHG +I+RD K NILL+ + + +++DFG AK P Q+ + V
Sbjct: 141 ----SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 193
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y +PE L SD+++ G ++ ++++G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE-WLAEVN 130
N+ P +LG G SV + I + + V + + Q +E L EV+
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 131 YLGQLY-HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
L ++ HPN+++L + LV++ M +G L ++L + + LS K+
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIMR 131
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT 249
+ + LH + +++RD K NILLD + N KL+DFG + G++ V GT
Sbjct: 132 ALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGT 186
Query: 250 YGYAAPEYLATGH------LTAKSDVYSFGVVLLEMLSG 282
Y APE + + D++S GV++ +L+G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE-WLAEVN 130
N+ P +LG G SV + I + + V + + Q +E L EV+
Sbjct: 4 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 62
Query: 131 YLGQLY-HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
L ++ HPN+++L + LV++ M +G L ++L + + LS K+
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIMR 118
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT 249
+ + LH + +++RD K NILLD + N KL+DFG + G++ V GT
Sbjct: 119 ALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGT 173
Query: 250 YGYAAPEYLATGH------LTAKSDVYSFGVVLLEMLSG 282
Y APE + + D++S GV++ +L+G
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 67 LKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-QDGFQGHK-- 123
L A + + + +GEG +G VFK A G +A+KR+ Q G +G
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFK--------ARDLKNGGRFVALKRVRVQTGEEGMPLS 57
Query: 124 --EWLAEVNYLGQLYHPNLVKLVGYCL-----EDDHRLLVYEFMPRGSLENHLFRRGSYF 176
+A + +L HPN+V+L C + LV+E + + L +L +
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG 116
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT 236
P + L +G+ FLH +V++RD K NIL+ ++ KL+DFGLA+
Sbjct: 117 VPTETIKDMMFQL--LRGLDFLHSH--RVVHRDLKPQNILVTSSGQIKLADFGLAR---I 169
Query: 237 GDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEML 280
T V+ T Y APE L D++S G + EM
Sbjct: 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Query: 155 LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSN 214
+V E++ +L + + G P++ ++V A + + F H + +I+RD K +N
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPAN 146
Query: 215 ILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFG 273
I++ K+ DFG+A+ +G+ + V+GT Y +PE + A+SDVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 274 VVLLEMLSG 282
VL E+L+G
Sbjct: 207 CVLYEVLTG 215
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVNYLGQLYH 137
+GEG FG V +G + M +A+K N +++L E + Q H
Sbjct: 17 CIGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P++VKL+G + ++ ++ E G L + L R S L A + +A+
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 126
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
L + ++RD N+L+ +N KL DFGL++ S + + APE
Sbjct: 127 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 183
Query: 258 LATGHLTAKSDVYSFGVVLLEML 280
+ T+ SDV+ FGV + E+L
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
F LG G FG V TG A+K L++ K+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---------LVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
L + P LVKL Y +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--- 245
L +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 152 LT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 197
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Query: 155 LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSN 214
+V E++ +L + + G P++ ++V A + + F H + +I+RD K +N
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPAN 146
Query: 215 ILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFG 273
I++ K+ DFG+A+ +G+ + V+GT Y +PE + A+SDVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 274 VVLLEMLSG 282
VL E+L+G
Sbjct: 207 CVLYEVLTG 215
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 35/241 (14%)
Query: 59 LKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-- 116
LK+ SF + +G G +G V +A + TG +A+K++
Sbjct: 42 LKARSFDVTFDVGDEYEIIETIGNGAYGVVS---------SARRRLTGQQVAIKKIPNAF 92
Query: 117 DGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGS----------LE 166
D K L E+ L H N++ + + ++ +P G +E
Sbjct: 93 DVVTNAKRTLRELKILKHFKHDNIIAI---------KDILRPTVPYGEFKSVYVVLDLME 143
Query: 167 NHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLS 226
+ L + QPL+ +G+ ++H A+ VI+RD K SN+L++ N K+
Sbjct: 144 SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIG 201
Query: 227 DFGLAKDGPTGDQSH--VSTRVMGTYGYAAPEYLATGH-LTAKSDVYSFGVVLLEMLSGR 283
DFG+A+ T H T + T Y APE + + H T D++S G + EML+ R
Sbjct: 202 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
Query: 284 R 284
+
Sbjct: 262 Q 262
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Query: 155 LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSN 214
+V E++ +L + + G P++ ++V A + + F H + +I+RD K +N
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPAN 146
Query: 215 ILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFG 273
I++ K+ DFG+A+ +G+ + V+GT Y +PE + A+SDVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 274 VVLLEMLSG 282
VL E+L+G
Sbjct: 207 CVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Query: 155 LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSN 214
+V E++ +L + + G P++ ++V A + + F H + +I+RD K +N
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPAN 146
Query: 215 ILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFG 273
I++ K+ DFG+A+ +G+ + V+GT Y +PE + A+SDVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 274 VVLLEMLSG 282
VL E+L+G
Sbjct: 207 CVLYEVLTG 215
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
F LG G FG V TG A+K L++ K+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---------LVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
L + P LVKL Y +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--- 245
L +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 152 LT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 197
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVNYLGQLYH 137
+GEG FG V +G + M +A+K N +++L E + Q H
Sbjct: 397 CIGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P++VKL+G E+ ++ E G L + L R S +L + A
Sbjct: 451 PHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRK-----FSLDLASLILYAYQLSTAL 504
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
+ + ++RD N+L+ +N KL DFGL++ S + + APE
Sbjct: 505 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 563
Query: 258 LATGHLTAKSDVYSFGVVLLEML 280
+ T+ SDV+ FGV + E+L
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
F LG G FG V TG A+K L++ K+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---------LVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
L + P LVKL Y +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--- 245
L +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 152 LT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 197
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 13/160 (8%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
L EV L L HPN++KL + + + LV E G L + + R F + + +
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-FNEVDAAVII 142
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGDQSHV 242
K L GV +LH + +++RD K N+LL++ K+ DFGL+ +Q +
Sbjct: 143 KQVLS---GVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS--AVFENQKKM 195
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R +GT Y APE L + K DV+S GV+L +L+G
Sbjct: 196 KER-LGTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAG 233
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E+MP G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D K++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 35/241 (14%)
Query: 59 LKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ-- 116
LK+ SF + +G G +G V +A + TG +A+K++
Sbjct: 41 LKARSFDVTFDVGDEYEIIETIGNGAYGVVS---------SARRRLTGQQVAIKKIPNAF 91
Query: 117 DGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGS----------LE 166
D K L E+ L H N++ + + ++ +P G +E
Sbjct: 92 DVVTNAKRTLRELKILKHFKHDNIIAI---------KDILRPTVPYGEFKSVYVVLDLME 142
Query: 167 NHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLS 226
+ L + QPL+ +G+ ++H A+ VI+RD K SN+L++ N K+
Sbjct: 143 SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIG 200
Query: 227 DFGLAKDGPTGDQSH--VSTRVMGTYGYAAPEYLATGH-LTAKSDVYSFGVVLLEMLSGR 283
DFG+A+ T H T + T Y APE + + H T D++S G + EML+ R
Sbjct: 201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
Query: 284 R 284
+
Sbjct: 261 Q 261
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 67 LKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-QDGFQGHK-- 123
L A + + + +GEG +G VFK A G +A+KR+ Q G +G
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFK--------ARDLKNGGRFVALKRVRVQTGEEGMPLS 57
Query: 124 --EWLAEVNYLGQLYHPNLVKLVGYCL-----EDDHRLLVYEFMPRGSLENHLFRRGSYF 176
+A + +L HPN+V+L C + LV+E + + L +L +
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG 116
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT 236
P + L +G+ FLH +V++RD K NIL+ ++ KL+DFGLA+
Sbjct: 117 VPTETIKDMMFQL--LRGLDFLHSH--RVVHRDLKPQNILVTSSGQIKLADFGLAR---I 169
Query: 237 GDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEML 280
T V+ T Y APE L D++S G + EM
Sbjct: 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E+MP G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D K++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE-WLAEVN 130
N+ P +LG G SV + I + + V + + Q +E L EV+
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 131 YLGQLY-HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
L ++ HPN+++L + LV++ M +G L ++L + + LS K+
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIMR 131
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGT 249
+ + LH + +++RD K NILLD + N KL+DFG + G++ V GT
Sbjct: 132 ALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGT 186
Query: 250 YGYAAPEYLATGH------LTAKSDVYSFGVVLLEMLSG 282
Y APE + + D++S GV++ +L+G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Query: 155 LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSN 214
+V E++ +L + + G P++ ++V A + + F H + +I+RD K +N
Sbjct: 110 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPAN 163
Query: 215 ILLDTNYNAKLSDFGLAKD-GPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFG 273
I++ K+ DFG+A+ +G+ + V+GT Y +PE + A+SDVYS G
Sbjct: 164 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 223
Query: 274 VVLLEMLSG 282
VL E+L+G
Sbjct: 224 CVLYEVLTG 232
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
F LG G FG V TG A+K L++ KE L E
Sbjct: 42 QFERIKTLGTGSFGRVM---------LVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
L + P LVKL + +D+ L +V E+ P G + +HL R G + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--- 245
L +LH + +IYRD K N+++D K++DFGLAK V R
Sbjct: 152 LT----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWX 197
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 108/251 (43%), Gaps = 40/251 (15%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKR--LNQDGFQGHKEWLAEVNYLGQLYH 137
+GEG +G+VFK A T ++A+KR L+ D L E+ L +L H
Sbjct: 10 IGEGTYGTVFK---------AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA----LGAAK 193
N+V+L D LV+EF + YF + +L ++ K
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQD--------LKKYFDSCNGDLDPEIVKSFLFQLLK 112
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ F H V++RD K N+L++ N KL++FGLA+ G + + T Y
Sbjct: 113 GLGFCHS--RNVLHRDLKPQNLLINRNGELKLANFGLAR--AFGIPVRCYSAEVVTLWYR 168
Query: 254 APEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIF 312
P+ L L + S D++S G + E+ + RP N V+ ++IF
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAEL------ANAGRPLFPGNDVD------DQLKRIF 216
Query: 313 RIIDNRLEGQY 323
R++ E Q+
Sbjct: 217 RLLGTPTEEQW 227
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 27/246 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+GEG G V A + +G +AVK ++ Q + EV + H N
Sbjct: 53 IGEGSTGIVC---------LAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+V++ L + ++ EF+ G+L + + + + ++ V + +A+LH
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA-----TVCEAVLQALAYLH 158
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFG----LAKDGPTGDQSHVSTRVMGTYGYAAP 255
VI+RD K+ +ILL + KLSDFG ++KD P ++GT + AP
Sbjct: 159 A--QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK------RKXLVGTPYWMAP 210
Query: 256 EYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRP-SGEHNLVEWAKPYLASKRKIFRI 314
E ++ + D++S G++++EM+ G + P L + P L + K+ +
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPV 270
Query: 315 IDNRLE 320
+ + LE
Sbjct: 271 LRDFLE 276
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 67 LKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVI-----AVKRLNQDGFQG 121
L+ ++ V+G G FG V + H A++ M + +KR + F
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEV---QLVRHK--ASQKVYAMKLLSKFEMIKRSDSAFFWE 124
Query: 122 HKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSW 181
++ +A N P +V+L +D + +V E+MP G L N + +Y P W
Sbjct: 125 ERDIMAFAN------SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKW 175
Query: 182 ----NLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTG 237
+ +AL A + +H RD K N+LLD + + KL+DFG
Sbjct: 176 AKFYTAEVVLALDAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDET 227
Query: 238 DQSHVSTRVMGTYGYAAPEYLAT----GHLTAKSDVYSFGVVLLEMLSG 282
H T V GT Y +PE L + G+ + D +S GV L EML G
Sbjct: 228 GMVHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVNYLGQLYH 137
+GEG FG V +G + + +A+K N +++L E + Q H
Sbjct: 17 CIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P++VKL+G + ++ ++ E G L + L R S L A + +A+
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 126
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
L + ++RD N+L+ +N KL DFGL++ S + + APE
Sbjct: 127 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 183
Query: 258 LATGHLTAKSDVYSFGVVLLEML 280
+ T+ SDV+ FGV + E+L
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVNYLGQLYH 137
+GEG FG V +G + + +A+K N +++L E + Q H
Sbjct: 19 CIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 72
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P++VKL+G + ++ ++ E G L + L R S L A + +A+
Sbjct: 73 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 128
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
L + ++RD N+L+ +N KL DFGL++ S + + APE
Sbjct: 129 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 185
Query: 258 LATGHLTAKSDVYSFGVVLLEML 280
+ T+ SDV+ FGV + E+L
Sbjct: 186 INFRRFTSASDVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVNYLGQLYH 137
+GEG FG V +G + + +A+K N +++L E + Q H
Sbjct: 14 CIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P++VKL+G + ++ ++ E G L + L R S L A + +A+
Sbjct: 68 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 123
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
L + ++RD N+L+ +N KL DFGL++ S + + APE
Sbjct: 124 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 180
Query: 258 LATGHLTAKSDVYSFGVVLLEML 280
+ T+ SDV+ FGV + E+L
Sbjct: 181 INFRRFTSASDVWMFGVCMWEIL 203
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVNYLGQLYH 137
+GEG FG V +G + + +A+K N +++L E + Q H
Sbjct: 20 CIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 73
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P++VKL+G E+ ++ E G L + L R S L A + +A+
Sbjct: 74 PHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 129
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
L + ++RD N+L+ +N KL DFGL++ S + + APE
Sbjct: 130 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 186
Query: 258 LATGHLTAKSDVYSFGVVLLEML 280
+ T+ SDV+ FGV + E+L
Sbjct: 187 INFRRFTSASDVWMFGVCMWEIL 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVNYLGQLYH 137
+GEG FG V +G + + +A+K N +++L E + Q H
Sbjct: 22 CIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 75
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P++VKL+G E+ ++ E G L + L R S L A + +A+
Sbjct: 76 PHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 131
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
L + ++RD N+L+ +N KL DFGL++ S + + APE
Sbjct: 132 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 188
Query: 258 LATGHLTAKSDVYSFGVVLLEML 280
+ T+ SDV+ FGV + E+L
Sbjct: 189 INFRRFTSASDVWMFGVCMWEIL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVNYLGQLYH 137
+GEG FG V +G + + +A+K N +++L E + Q H
Sbjct: 45 CIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 98
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P++VKL+G E+ ++ E G L + L R S L A + +A+
Sbjct: 99 PHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 154
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
L + ++RD N+L+ +N KL DFGL++ S + + APE
Sbjct: 155 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 211
Query: 258 LATGHLTAKSDVYSFGVVLLEML 280
+ T+ SDV+ FGV + E+L
Sbjct: 212 INFRRFTSASDVWMFGVCMWEIL 234
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 71 TRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
T ++ LG+G F SV + + A + M+I K+L+ + H++ E
Sbjct: 10 TEEYQLFEELGKGAF-SVVRRCV---KVLAGQEYAAMIINTKKLSA---RDHQKLEREAR 62
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
L HPN+V+L E+ H L+++ + G L + R Y + + + ++
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL-- 120
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGDQSHVSTRVM 247
A LH + V++R+ K N+LL + KL+DFGLA + Q+
Sbjct: 121 ----EAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FA 174
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT GY +PE L D+++ GV+L +L G
Sbjct: 175 GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
F LG G FG V TG A+K L++ K+ L E
Sbjct: 35 QFERIKTLGTGSFGRVM---------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 86 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 144
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--- 245
L +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 LT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 190
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDG-FQGHKEWLAEVNYLGQLYH- 137
LGE G G+ + W + F T G VIAVK++ + G + +K L +++ + + +
Sbjct: 30 LGEMGSGTCGQVW--KMRFRKT----GHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC 83
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P +V+ G + + + E M G+ L +R P+ + K+ + K + +
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYY 139
Query: 198 L---HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAA 254
L HG VI+RD K SNILLD KL DFG++ G D R G Y A
Sbjct: 140 LKEKHG----VIHRDVKPSNILLDERGQIKLCDFGIS--GRLVDDK-AKDRSAGCAAYMA 192
Query: 255 PEYLATGHLTA-----KSDVYSFGVVLLEMLSGR 283
PE + T ++DV+S G+ L+E+ +G+
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 16/162 (9%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLED---DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
E+ L +L HPN+VKLV L+D DH +V+E + +G + +PLS +
Sbjct: 86 EIAILKKLDHPNVVKLVE-VLDDPNEDHLYMVFELVNQGPV-----MEVPTLKPLSEDQA 139
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
KG+ +LH K+I+RD K SN+L+ + + K++DFG++ + D + +
Sbjct: 140 RFYFQDLIKGIEYLH--YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--LLS 195
Query: 245 RVMGTYGYAAPEYLATGH--LTAKS-DVYSFGVVLLEMLSGR 283
+GT + APE L+ + K+ DV++ GV L + G+
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
F LG G FG V TG A+K L++ KE L E
Sbjct: 42 QFERIKTLGTGSFGRVM---------LVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
L + P LVKL + +D+ L +V E+ P G + +HL R G + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--- 245
L +LH + +IYRD K N+++D +++DFGLAK V R
Sbjct: 152 LT----FEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWX 197
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
F LG G FG V TG A+K L++ K+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--- 245
L +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 153 LT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 198
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 33 SPIGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 82
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 136
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 137 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--- 191
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 192 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 99/240 (41%), Gaps = 53/240 (22%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+F +VLG+G FG V K A A+K++ + L+EV L
Sbjct: 7 DFEEIAVLGQGAFGQVVK---------ARNALDSRYYAIKKIRHTE-EKLSTILSEVMLL 56
Query: 133 GQLYHPNLVKLVGYCLEDDH-------------RLLVYEFMPRGSL------ENHLFRRG 173
L H +V+ LE + + E+ G+L EN +R
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD 116
Query: 174 SYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK- 232
Y W L ++ + ++++H +I+RD K NI +D + N K+ DFGLAK
Sbjct: 117 EY-----WRLFRQIL----EALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKN 165
Query: 233 -----DGPTGDQSHVS------TRVMGTYGYAAPEYL-ATGHLTAKSDVYSFGVVLLEML 280
D D ++ T +GT Y A E L TGH K D+YS G++ EM+
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
F LG G FG V TG A+K L++ K+ L E
Sbjct: 35 QFERIKTLGTGSFGRVM---------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 86 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 144
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--- 245
L +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 LT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 190
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++P G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D K++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKX----QKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ-PLSWNLRLKVALGAAKGV 195
HPN+VKL + H LV E + G L + ++ + + S+ +R V+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS------- 117
Query: 196 AFLHGAETKVIYRDFKTSNILL---DTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
A H + V++RD K N+L + N K+ DFG A+ P +Q + T T Y
Sbjct: 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-LKTPCF-TLHY 175
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGR 283
AAPE L D++S GV+L MLSG+
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 100
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E++P G + +HL R G + +P + ++ L
Sbjct: 101 F------PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+L+D +++DFG AK V R +
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 99
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E++P G + +HL R G + +P + ++ L
Sbjct: 100 F------PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+L+D +++DFG AK V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
F LG G FG V TG A+K L++ K+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--- 245
L +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 153 LT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 198
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 99
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E++P G + +HL R G + +P + ++ L
Sbjct: 100 F------PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+L+D +++DFG AK V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVNYLGQLYH 137
+GEG FG V +G + M +A+K N +++L E + Q H
Sbjct: 17 CIGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P++VKL+G + ++ ++ E G L + L R S +L + A
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK-----FSLDLASLILYAYQLSTAL 124
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
+ + ++RD N+L+ KL DFGL++ S + + APE
Sbjct: 125 AYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 183
Query: 258 LATGHLTAKSDVYSFGVVLLEML 280
+ T+ SDV+ FGV + E+L
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
F LG G FG V TG A+K L++ K+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--- 245
L +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 153 LT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 198
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 61 SFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHS---FAATKPGTGMVIAVKRLNQD 117
S FSD N+ LG+G F SV + + + + FAA +I K+L+
Sbjct: 24 STKFSD------NYDVKEELGKGAF-SVVRRCVHKTTGLEFAAK------IINTKKLSAR 70
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ 177
FQ + E +L HPN+V+L E+ LV++ + G L + R Y +
Sbjct: 71 DFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 127
Query: 178 PLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDG 234
+ + ++ + +A+ H +++R+ K N+LL + KL+DFGLA +
Sbjct: 128 ADASHCIQQIL----ESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ H GT GY +PE L + D+++ GV+L +L G
Sbjct: 182 NDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 35 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 84
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 138
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 139 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR--- 193
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 194 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
F LG G FG V TG A+K L++ K+ L E
Sbjct: 63 QFERIKTLGTGSFGRVM---------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 114 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 172
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--- 245
L +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 173 LT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 99
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E+ P G + +HL R G + +P + ++ L
Sbjct: 100 F------PFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+++D K++DFG AK V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 39/232 (16%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWL- 126
+T R +G+G FG V++G G +AVK + + + W
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFR 83
Query: 127 -AEVNYLGQLYHPNLVKLVGYCLEDD----HRLLVYEFMPRGSLENHLFRRGSYFQPLSW 181
AE+ L H N++ + +D+ LV ++ GSL ++L R + +
Sbjct: 84 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-- 141
Query: 182 NLRLKVALGAAKGVAFLH----GAETK--VIYRDFKTSNILLDTNYNAKLSDFGLA--KD 233
+K+AL A G+A LH G + K + +RD K+ NIL+ N ++D GLA D
Sbjct: 142 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 198
Query: 234 GPTGDQSHVSTRVMGTYGYAAPEYLATG----HLTA--KSDVYSFGVVLLEM 279
T +GT Y APE L H + ++D+Y+ G+V E+
Sbjct: 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 33 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 82
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 136
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 137 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--- 191
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 192 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 35 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 84
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 138
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 139 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 193
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 194 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKX----QKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 35 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 84
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 138
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 139 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR--- 193
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 194 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 31/217 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEV 129
F LG G FG V TG A+K L++ K+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
L + P LVKL + +D+ L +V E+ P G + +HL R G + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--- 245
L +LH + +IYRD K N+++D K++DFG AK V R
Sbjct: 153 LT----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWX 198
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 40 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYRELRLLKH 89
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 90 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 143
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 144 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 198
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 199 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 39/232 (16%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWL- 126
+T R +G+G FG V++G G +AVK + + + W
Sbjct: 25 RTIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFR 70
Query: 127 -AEVNYLGQLYHPNLVKLVGYCLEDD----HRLLVYEFMPRGSLENHLFRRGSYFQPLSW 181
AE+ L H N++ + +D+ LV ++ GSL ++L R + +
Sbjct: 71 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-- 128
Query: 182 NLRLKVALGAAKGVAFLH----GAETK--VIYRDFKTSNILLDTNYNAKLSDFGLA--KD 233
+K+AL A G+A LH G + K + +RD K+ NIL+ N ++D GLA D
Sbjct: 129 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 185
Query: 234 GPTGDQSHVSTRVMGTYGYAAPEYLATG----HLTA--KSDVYSFGVVLLEM 279
T +GT Y APE L H + ++D+Y+ G+V E+
Sbjct: 186 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 39 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 88
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 89 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 142
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 143 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--- 197
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 198 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 33 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 82
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 136
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 137 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 191
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 192 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 30 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 79
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 133
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 134 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 188
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 27 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 76
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 77 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 130
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 131 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 185
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 186 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 40 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 89
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 90 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 143
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 144 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 198
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 199 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 35 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 84
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 138
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 139 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR--- 193
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 194 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 40 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 89
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 90 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 143
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 144 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 198
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 199 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 30 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 79
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 133
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 134 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 188
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 100
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E++P G + +HL R G + +P + ++ L
Sbjct: 101 F------PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+L+D +++DFG AK V R +
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 99
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E++P G + +HL R G + +P + ++ L
Sbjct: 100 F------PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+L+D +++DFG AK V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 39 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 88
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 89 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 142
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 143 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 197
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 198 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 24 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 73
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 127
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 128 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 182
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 183 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 100
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E++P G + +HL R G + +P + ++ L
Sbjct: 101 F------PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+L+D +++DFG AK V R +
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 99
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E++P G + +HL R G + +P + ++ L
Sbjct: 100 F------PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+L+D +++DFG AK V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 74 FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLG 133
F +S LG G V++ + GT A+K L + K E+ L
Sbjct: 55 FEVESELGRGATSIVYR---------CKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLL 103
Query: 134 QLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
+L HPN++KL LV E + G L + + +G Y + + + ++ +
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL----E 159
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
VA+LH E +++RD K N+L T + K++DFGL+K + + V GT
Sbjct: 160 AVAYLH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVLMKTVCGTP 214
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GY APE L + D++S G++ +L G
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 34 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 83
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 137
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 138 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 192
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 193 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 25 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 74
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 75 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 128
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 129 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 183
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 184 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 30 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 79
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 133
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 134 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 188
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 33 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 82
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 136
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 137 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 191
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 192 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 51 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 100
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 101 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 154
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 155 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR--- 209
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 210 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 39/231 (16%)
Query: 69 TATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWL-- 126
T R +G+G FG V++G G +AVK + + + W
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFRE 46
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDD----HRLLVYEFMPRGSLENHLFRRGSYFQPLSWN 182
AE+ L H N++ + +D+ LV ++ GSL ++L R + +
Sbjct: 47 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 103
Query: 183 LRLKVALGAAKGVAFLH----GAETK--VIYRDFKTSNILLDTNYNAKLSDFGLA--KDG 234
+K+AL A G+A LH G + K + +RD K+ NIL+ N ++D GLA D
Sbjct: 104 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 161
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATG----HLTA--KSDVYSFGVVLLEM 279
T +GT Y APE L H + ++D+Y+ G+V E+
Sbjct: 162 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 22/208 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG--HKEWLAEVNYLGQLYH 137
LG+G F V + K G A K +N H++ E L H
Sbjct: 30 LGKGAFSVVRR---------CVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 80
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
PN+V+L E+ H L+++ + G L + R Y + + + ++ A
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL------EAV 134
Query: 198 LHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAA 254
LH + V++RD K N+LL + KL+DFGLA + Q+ GT GY +
Sbjct: 135 LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLS 192
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSG 282
PE L D+++ GV+L +L G
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 47/237 (19%)
Query: 73 NFRPDSVLGEGGFGSVFKG--WIDEHSFAATK---------PGTGMVIAVKRLN-QDGFQ 120
+F +VLG+G FG V K +D +A K V+ + LN Q +
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 121 GHKEWLAEVNYLGQLY----HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF 176
+ WL N++ + L + YC ++R L Y+ + +L +R Y
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYC---ENRTL-YDLIHSENLNQ---QRDEY- 118
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK---- 232
W L ++ + ++++H +I+RD K NI +D + N K+ DFGLAK
Sbjct: 119 ----WRLFRQIL----EALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 233 --DGPTGDQSHVS------TRVMGTYGYAAPEYL-ATGHLTAKSDVYSFGVVLLEML 280
D D ++ T +GT Y A E L TGH K D+YS G++ EM+
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 48 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 97
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 151
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 152 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 206
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 207 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 25 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 74
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 75 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 128
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 129 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 183
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 184 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 34 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 83
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 137
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 138 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR--- 192
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 193 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 99
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E++P G + +HL R G + +P + ++ L
Sbjct: 100 F------PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+L+D +++DFG AK V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 51 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 100
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 101 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 154
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 155 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 209
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 210 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 26 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 75
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 76 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 129
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 130 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 184
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 185 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 47 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 96
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 97 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 150
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 151 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 205
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 206 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
L EV L QL HPN++KL + + + LV E G L + + R F + + +
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVIM 127
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGDQSHV 242
K L G +LH + +++RD K N+LL++ K+ DFGL+ G +
Sbjct: 128 KQVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--- 179
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+GT Y APE L + K DV+S GV+L +L G
Sbjct: 180 MKERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 218
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 30 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 79
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 133
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 134 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR--- 188
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 39/231 (16%)
Query: 69 TATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWL-- 126
T R +G+G FG V++G G +AVK + + + W
Sbjct: 6 TIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFRE 51
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDD----HRLLVYEFMPRGSLENHLFRRGSYFQPLSWN 182
AE+ L H N++ + +D+ LV ++ GSL ++L R + +
Sbjct: 52 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 108
Query: 183 LRLKVALGAAKGVAFLH----GAETK--VIYRDFKTSNILLDTNYNAKLSDFGLA--KDG 234
+K+AL A G+A LH G + K + +RD K+ NIL+ N ++D GLA D
Sbjct: 109 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 166
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATG----HLTA--KSDVYSFGVVLLEM 279
T +GT Y APE L H + ++D+Y+ G+V E+
Sbjct: 167 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 85
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E++P G + +HL R G + +P + ++ L
Sbjct: 86 F------PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 138
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+L+D +++DFG AK V R +
Sbjct: 139 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTL 184
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 61 SFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHS---FAATKPGTGMVIAVKRLNQD 117
S FSD N+ LG+G F SV + + + + FAA +I K+L+
Sbjct: 1 STKFSD------NYDVKEELGKGAF-SVVRRCVHKTTGLEFAAK------IINTKKLSAR 47
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ 177
FQ + E +L HPN+V+L E+ LV++ + G L + R Y +
Sbjct: 48 DFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 104
Query: 178 PLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDG 234
+ + ++ + +A+ H +++R+ K N+LL + KL+DFGLA +
Sbjct: 105 ADASHCIQQIL----ESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ H GT GY +PE L + D+++ GV+L +L G
Sbjct: 159 NDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 99
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E+ P G + +HL R G + +P + ++ L
Sbjct: 100 F------PFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+++D K++DFG AK V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 34 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 83
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 137
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 138 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 192
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 193 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 39/231 (16%)
Query: 69 TATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWL-- 126
T R +G+G FG V++G G +AVK + + + W
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFRE 48
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDD----HRLLVYEFMPRGSLENHLFRRGSYFQPLSWN 182
AE+ L H N++ + +D+ LV ++ GSL ++L R + +
Sbjct: 49 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 105
Query: 183 LRLKVALGAAKGVAFLH----GAETK--VIYRDFKTSNILLDTNYNAKLSDFGLA--KDG 234
+K+AL A G+A LH G + K + +RD K+ NIL+ N ++D GLA D
Sbjct: 106 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 163
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATG----HLTA--KSDVYSFGVVLLEM 279
T +GT Y APE L H + ++D+Y+ G+V E+
Sbjct: 164 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 61 SFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHS---FAATKPGTGMVIAVKRLNQD 117
S FSD N+ LG+G F SV + + + + FAA +I K+L+
Sbjct: 1 STKFSD------NYDVKEELGKGAF-SVVRRCVHKTTGLEFAAK------IINTKKLSAR 47
Query: 118 GFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQ 177
FQ + E +L HPN+V+L E+ LV++ + G L + R Y +
Sbjct: 48 DFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 104
Query: 178 PLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDG 234
+ + ++ + +A+ H +++R+ K N+LL + KL+DFGLA +
Sbjct: 105 ADASHCIQQIL----ESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ H GT GY +PE L + D+++ GV+L +L G
Sbjct: 159 NDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL-NQDGFQGHKEWLAEVNYLGQLYH 137
+GEG FG V +G + M +A+K N +++L E + Q H
Sbjct: 397 CIGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
P++VKL+G E+ ++ E G L + L R S +L + A
Sbjct: 451 PHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRK-----FSLDLASLILYAYQLSTAL 504
Query: 198 LHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
+ + ++RD N+L+ KL DFGL++ S + + APE
Sbjct: 505 AYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 563
Query: 258 LATGHLTAKSDVYSFGVVLLEML 280
+ T+ SDV+ FGV + E+L
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 93/224 (41%), Gaps = 29/224 (12%)
Query: 80 LGEGGFGSV--FKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYH 137
LGEGGF V +G D H +A +KR+ Q +E E + H
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYA-----------LKRILCHEQQDREEAQREADMHRLFNH 85
Query: 138 PNLVKLVGYCLED----DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
PN+++LV YCL + L+ F RG+L N + R L+ + L + LG +
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT---GDQSHVSTRVMG-- 248
G+ +H +RD K +NILL L D G G + ++ +
Sbjct: 146 GLEAIHA--KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 249 --TYGYAAPEYLATGH---LTAKSDVYSFGVVLLEMLSGRRAVD 287
T Y APE + + ++DV+S G VL M+ G D
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 25/216 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHS---FAATKPGTGMVIAVKRLNQDGFQGHKEWLAEV 129
N+ LG+G F SV + + + + FAA +I K+L+ FQ + E
Sbjct: 6 NYDVKEELGKGAF-SVVRRCVHKTTGLEFAAK------IINTKKLSARDFQKLER---EA 55
Query: 130 NYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+L HPN+V+L E+ LV++ + G L + R Y + + + ++
Sbjct: 56 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL- 114
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGDQSHVSTRV 246
+ +A+ H +++R+ K N+LL + KL+DFGLA + + H
Sbjct: 115 ---ESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GF 166
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT GY +PE L + D+++ GV+L +L G
Sbjct: 167 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
L EV L QL HPN++KL + + + LV E G L + + R F + + +
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVIM 110
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGDQSHV 242
K L G +LH + +++RD K N+LL++ K+ DFGL+ G +
Sbjct: 111 KQVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--- 162
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+GT Y APE L + K DV+S GV+L +L G
Sbjct: 163 MKERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 201
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D+ T +
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE---MTGXVA 184
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
T Y APE + H D++S G ++ E+L+GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 32/237 (13%)
Query: 55 RSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL 114
+ P S S + T+ +R + LGEG +G V+K A T +A+KR+
Sbjct: 17 QGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYK---------AIDTVTNETVAIKRI 67
Query: 115 ----NQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHL 169
++G G + EV+ L +L H N+++L + +HRL L++E+ EN L
Sbjct: 68 RLEHEEEGVPGTA--IREVSLLKELQHRNIIELKS-VIHHNHRLHLIFEYA-----ENDL 119
Query: 170 FRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-----K 224
+ +S + GV F H + ++RD K N+LL + + K
Sbjct: 120 KKYMDKNPDVSMRVIKSFLYQLINGVNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLK 177
Query: 225 LSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEML 280
+ DFGLA+ G T + T Y PE L + H + D++S + EML
Sbjct: 178 IGDFGLAR--AFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK-EWLAEVNYLGQLYHP 138
LGEG + +V+KG T ++A+K + + +G + EV+ L L H
Sbjct: 10 LGEGTYATVYKG---------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
N+V L + LV+E++ + L+ +L G+ + L L L +G+A+
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLL---RGLAYC 116
Query: 199 HGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE-Y 257
H KV++RD K N+L++ KL+DFGLA+ +++ + V T Y P+
Sbjct: 117 H--RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDIL 172
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSGR 283
L + + + D++ G + EM +GR
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 30/224 (13%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA-- 127
AT + P + +G G +G+V+K A P +G +A+K + G L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYK---------ARDPHSGHFVALKSVRVPNGGGGGGGLPIS 57
Query: 128 ---EVNYLGQLY---HPNLVKLVGYCL--EDDHRL---LVYEFMPRGSLENHLFRRGSYF 176
EV L +L HPN+V+L+ C D + LV+E + + L +L +
Sbjct: 58 TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG 116
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPT 236
P L +G+ FLH +++RD K NIL+ + KL+DFGLA+
Sbjct: 117 LPAETIKDLMRQF--LRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLAR---I 169
Query: 237 GDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEML 280
T V+ T Y APE L D++S G + EM
Sbjct: 170 YSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 19/205 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V + T+ TG A K + + E+ + L HP
Sbjct: 59 LGTGAFGVVHR---------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV L +D+ +++YEFM G L + +S + ++ KG+ +H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 200 GAETKVIYRDFKTSNILLDTNYNA--KLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
E ++ D K NI+ T + KL DFGL V+T GT +AAPE
Sbjct: 167 --ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV 221
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSG 282
+ +D++S GV+ +LSG
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ D+GLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWL--AEVNYLGQLYH 137
+G+G FG V++G G +AVK + + + W AE+ L H
Sbjct: 11 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 56
Query: 138 PNLVKLVGYCLEDD----HRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
N++ + +D+ LV ++ GSL ++L R + + +K+AL A
Sbjct: 57 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTAS 111
Query: 194 GVAFLH----GAETK--VIYRDFKTSNILLDTNYNAKLSDFGLA--KDGPTGDQSHVSTR 245
G+A LH G + K + +RD K+ NIL+ N ++D GLA D T
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 171
Query: 246 VMGTYGYAAPEYLATG----HLTA--KSDVYSFGVVLLEM 279
+GT Y APE L H + ++D+Y+ G+V E+
Sbjct: 172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 100
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P L KL + +D+ L +V E+ P G + +HL R G + +P + ++ L
Sbjct: 101 F------PFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+++D K++DFG AK V R +
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 19/149 (12%)
Query: 138 PNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
P LVKL + +D+ L +V E+ P G + +HL R G + +P + ++ L
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 156
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---VMGTYGYA 253
+LH + +IYRD K N+L+D K++DFG AK V R + GT Y
Sbjct: 157 YLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + + D ++ GV++ EM +G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAEVNYLGQLY 136
+G+G FG V K T + A+K +N+ E E+ + L
Sbjct: 23 IGKGSFGKVC---------IVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGV 195
HP LV L Y +D+ + +V + + G L HL ++ +F+ + L + +
Sbjct: 74 HPFLVNL-WYSFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEETVKLFI-----CELVM 126
Query: 196 AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAP 255
A + ++I+RD K NILLD + + ++DF +A P Q T + GT Y AP
Sbjct: 127 ALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYMAP 183
Query: 256 EYLATGHLTAKS---DVYSFGVVLLEMLSGRR 284
E ++ S D +S GV E+L GRR
Sbjct: 184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKS----QKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGL + +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 27/221 (12%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-QDGFQGHK----E 124
AT + P + +G G +G+V+K A P +G +A+K + +G +G
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK---------ARDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 125 WLAEVNYLGQLYHPNLVKLVGYCL--EDDHRL---LVYEFMPRGSLENHLFRRGSYFQPL 179
+A + L HPN+V+L+ C D + LV+E + + L +L + P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 180 SWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQ 239
L +G+ FLH +++RD K NIL+ + KL+DFGLA+
Sbjct: 112 ETIKDLMRQF--LRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSY 164
Query: 240 SHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEML 280
V+ T Y APE L D++S G + EM
Sbjct: 165 QMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 19/205 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V + T+ TG A K + + E+ + L HP
Sbjct: 165 LGTGAFGVVHR---------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV L +D+ +++YEFM G L + +S + ++ KG+ +H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 200 GAETKVIYRDFKTSNILLDTNYNA--KLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
E ++ D K NI+ T + KL DFGL V+T GT +AAPE
Sbjct: 273 --ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV 327
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSG 282
+ +D++S GV+ +LSG
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 108/254 (42%), Gaps = 47/254 (18%)
Query: 45 PTPRSEGE--ILRSPNLKSFSFS---DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFA 99
P+P++E +L + LK + ++ AT R LG G FG V +
Sbjct: 46 PSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHR--------- 92
Query: 100 ATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEF 159
TG AVK++ + F+ E+ L P +V L G E + E
Sbjct: 93 MEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVREGPWVNIFMEL 147
Query: 160 MPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA-KGVAFLHGAETKVIYRDFKTSNILLD 218
+ GSL + +G + R LG A +G+ +LH ++++ D K N+LL
Sbjct: 148 LEGGSLGQLVKEQGCLPED-----RALYYLGQALEGLEYLH--SRRILHGDVKADNVLLS 200
Query: 219 TN-YNAKLSDFG---------LAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSD 268
++ +A L DFG L KD TGD + GT + APE + AK D
Sbjct: 201 SDGSHAALCDFGHAVCLQPDGLGKDLLTGDY------IPGTETHMAPEVVLGRSCDAKVD 254
Query: 269 VYSFGVVLLEMLSG 282
V+S ++L ML+G
Sbjct: 255 VWSSCCMMLHMLNG 268
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 99
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E+ P G + +HL R G + +P + ++ L
Sbjct: 100 F------PFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+++D +++DFG AK V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG +AVK+L++ FQ K E+ L
Sbjct: 47 SPVGSGAYGSVC---------AAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 96
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 97 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 150
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 151 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 205
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 206 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG +AVK+L++ FQ K E+ L
Sbjct: 48 SPVGSGAYGSVC---------AAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 97
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 151
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 152 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 206
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 207 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV + +G+ IAVK+L++ FQ K E+ L
Sbjct: 57 SPVGSGAYGSVCSSY---------DVKSGLKIAVKKLSR-PFQSIIHAKRTYRELRLLKH 106
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 107 MKHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 160
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 161 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 215
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 216 --WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG +AVK+L++ FQ K E+ L
Sbjct: 24 SPVGSGAYGSVC---------AAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 73
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 127
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 128 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 182
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 183 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 74 FRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLG 133
R VL EGGF V++ A G+G A+KRL + + ++ + EV ++
Sbjct: 30 LRVRRVLAEGGFAFVYE---------AQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMK 80
Query: 134 QLY-HPNLVKL-----VGYCLED--DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
+L HPN+V+ +G D L+ + +G L L + S PLS + L
Sbjct: 81 KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESR-GPLSCDTVL 139
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLA 231
K+ + V +H + +I+RD K N+LL KL DFG A
Sbjct: 140 KIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 27/221 (12%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-QDGFQGHK----E 124
AT + P + +G G +G+V+K A P +G +A+K + +G +G
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK---------ARDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 125 WLAEVNYLGQLYHPNLVKLVGYCL--EDDHRL---LVYEFMPRGSLENHLFRRGSYFQPL 179
+A + L HPN+V+L+ C D + LV+E + + L +L + P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 180 SWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQ 239
L +G+ FLH +++RD K NIL+ + KL+DFGLA+
Sbjct: 112 ETIKDLMRQF--LRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSY 164
Query: 240 SHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEML 280
V+ T Y APE L D++S G + EM
Sbjct: 165 QMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 100
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P L KL + +D+ L +V E+ P G + +HL R G + +P + ++ L
Sbjct: 101 F------PFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+++D K++DFG AK V R +
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG +AVK+L++ FQ K E+ L
Sbjct: 34 SPVGSGAYGSVC---------AAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 83
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 137
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 138 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 192
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 193 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 43/240 (17%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWL 126
+T R +G+G +G V++G W G +AVK + + + W
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRGLW------------HGESVAVKIFSS---RDEQSWF 48
Query: 127 AEVNYLGQ--LYHPNLVKLVGYCL----EDDHRLLVYEFMPRGSLENHLFRRGSYFQPLS 180
E L H N++ + + L+ + GSL + L R Q L
Sbjct: 49 RETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR-----QTLE 103
Query: 181 WNLRLKVALGAAKGVAFLH----GAETK--VIYRDFKTSNILLDTNYNAKLSDFGLAKDG 234
+L L++A+ AA G+A LH G + K + +RDFK+ N+L+ +N ++D GLA
Sbjct: 104 PHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMH 163
Query: 235 PTG-DQSHVSTR-VMGTYGYAAPEYLATGHLT------AKSDVYSFGVVLLEMLSGRRAV 286
G D + +GT Y APE L T +D+++FG+VL E+ RR +
Sbjct: 164 SQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQLY 136
+G G +GSV AA TG +AVK+L++ FQ K E+ L +
Sbjct: 40 VGSGAYGSVC---------AAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK 89
Query: 137 HPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG 190
H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 90 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIYQ 143
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 144 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----- 196
Query: 251 GYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 197 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 100
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P L KL + +D+ L +V E+ P G + +HL R G + +P + ++ L
Sbjct: 101 F------PFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+++D K++DFG AK V R +
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 90/217 (41%), Gaps = 31/217 (14%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNY 131
R + D +G G F +V+KG E + + ++L + Q KE E
Sbjct: 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVA----WCELQDRKLTKSERQRFKE---EAEX 78
Query: 132 LGQLYHPNLVKLVG---------YCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWN 182
L L HPN+V+ C+ +LV E G+L+ +L R F+
Sbjct: 79 LKGLQHPNIVRFYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKR----FKVXKIK 129
Query: 183 LRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLD-TNYNAKLSDFGLAKDGPTGDQSH 241
+ KG+ FLH +I+RD K NI + + K+ D GLA T ++
Sbjct: 130 VLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKRAS 185
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLE 278
+ V+GT + APE + DVY+FG LE
Sbjct: 186 FAKAVIGTPEFXAPEXYEEKY-DESVDVYAFGXCXLE 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 27/221 (12%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN-QDGFQGHK----E 124
AT + P + +G G +G+V+K A P +G +A+K + +G +G
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK---------ARDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 125 WLAEVNYLGQLYHPNLVKLVGYCL--EDDHRL---LVYEFMPRGSLENHLFRRGSYFQPL 179
+A + L HPN+V+L+ C D + LV+E + + L +L + P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 180 SWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQ 239
L +G+ FLH +++RD K NIL+ + KL+DFGLA+
Sbjct: 112 ETIKDLMRQF--LRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSY 164
Query: 240 SHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEML 280
V+ T Y APE L D++S G + EM
Sbjct: 165 QMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 41/220 (18%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG +AVK+L++ FQ K E+ L
Sbjct: 24 SPVGSGAYGSVC---------AAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 73
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFR----RGSYFQPLSWNLR 184
+ H N++ L+ LE+ + LV M G+ N++ + + Q L + +
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQI- 130
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ +V+T
Sbjct: 131 -------LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 181
Query: 245 RVMGTYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
R Y APE + H D++S G ++ E+L+GR
Sbjct: 182 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG +AVK+L++ FQ K E+ L
Sbjct: 48 SPVGSGAYGSVC---------AAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 97
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 151
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 152 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR--- 206
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 207 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 173 GSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK 232
G Y +P++ + + A+G+ FL + K I+RD NILL N K+ DFGLA+
Sbjct: 190 GFYKEPITMEDLISYSFQVARGMEFL--SSRKCIHRDLAARNILLSENNVVKICDFGLAR 247
Query: 233 DGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
D + APE + + KSDV+S+GV+L E+ S
Sbjct: 248 DIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG-HKEWLAEVNYLGQL-YH 137
LG G FG V + +F K T +AVK L + +K + E+ L + +H
Sbjct: 35 LGRGAFGKV----VQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHH 90
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSLENHLFRRGSYF 176
N+V L+G C + L+V E+ G+L N+L + F
Sbjct: 91 LNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLF 130
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG +AVK+L++ FQ K E+ L
Sbjct: 24 SPVGSGAYGSVC---------AAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 73
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 127
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 128 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR--- 182
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 183 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 106/249 (42%), Gaps = 37/249 (14%)
Query: 45 PTPRSEGE--ILRSPNLKSFSFS---DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFA 99
P+P++E +L + LK + ++ AT R LG G FG V +
Sbjct: 65 PSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHR--------- 111
Query: 100 ATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEF 159
TG AVK++ + F+ E+ L P +V L G E + E
Sbjct: 112 MEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVREGPWVNIFMEL 166
Query: 160 MPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA-KGVAFLHGAETKVIYRDFKTSNILLD 218
+ GSL + +G + R LG A +G+ +LH ++++ D K N+LL
Sbjct: 167 LEGGSLGQLVKEQGCLPED-----RALYYLGQALEGLEYLH--SRRILHGDVKADNVLLS 219
Query: 219 TN-YNAKLSDFG----LAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFG 273
++ +A L DFG L DG G + GT + APE + AK DV+S
Sbjct: 220 SDGSHAALCDFGHAVCLQPDG-LGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSC 278
Query: 274 VVLLEMLSG 282
++L ML+G
Sbjct: 279 CMMLHMLNG 287
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 21/229 (9%)
Query: 60 KSFSFSDLKTATR---NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ 116
++ F + T TR +++ LG+G F SV + + + T+ +I K+L+
Sbjct: 16 ENLYFQXMATCTRFTDDYQLFEELGKGAF-SVVRRCVKK---TPTQEYAAKIINTKKLSA 71
Query: 117 DGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYF 176
+ H++ E L HPN+V+L E+ LV++ + G L + R Y
Sbjct: 72 ---RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 128
Query: 177 QPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKD 233
+ + + ++ + V +H + +++RD K N+LL + KL+DFGLA +
Sbjct: 129 EADASHCIHQI----LESVNHIH--QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE 182
Query: 234 GPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
Q+ GT GY +PE L D+++ GV+L +L G
Sbjct: 183 VQGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ D GLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 110 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 168
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 169 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 214
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 215 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVN 130
F LG G FG V K + +A V+ +K++ K L VN
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVN 99
Query: 131 YLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
+ P LVKL + +D+ L +V E++ G + +HL R G + +P + ++ L
Sbjct: 100 F------PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---V 246
+LH + +IYRD K N+L+D +++DFG AK V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 89 FKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLA--------------------- 127
F+ +++H + G+G V++ Q G KE+ A
Sbjct: 20 FQSMVEDHYEMGEELGSGQFAIVRKCRQKG--TGKEYAAKFIKKRRLXSSRRGVSREEIE 77
Query: 128 -EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EVN L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF-LK 136
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHV 242
L GV +LH ++ + D K NI LLD N KL DFG+A G++
Sbjct: 137 QILD---GVHYLHSK--RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF-- 189
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 190 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ FGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ D GLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 84 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 142
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 143 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 188
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 189 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 110 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 168
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK +
Sbjct: 169 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT---- 218
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 219 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK------EWLAEVNYLG 133
LG G F V K + GTG A K + + + E EVN L
Sbjct: 13 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 134 QLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
++ HPN++ L +L+ E + G L + L + S + + LK L
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF-LKQILD--- 119
Query: 194 GVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVSTRVMGT 249
GV +LH ++ + D K NI LLD N KL DFG+A G++ + GT
Sbjct: 120 GVHYLHSK--RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 174
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ APE + L ++D++S GV+ +LSG
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 90 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 148
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 149 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 194
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 119/290 (41%), Gaps = 45/290 (15%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
L E G ++KG W G +V+ V ++ + +++ E L HP
Sbjct: 18 LNENHSGELWKGRW----------QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 139 NLVKLVGYCLEDD--HRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
N++ ++G C H L+ +MP GSL N + G+ F + + +K AL A+G+A
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYN-VLHEGTNFV-VDQSQAVKFALDMARGMA 125
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLS--DFGLAKDGPTGDQSHVSTRVMGTYGYAA 254
FLH E + + ++++D + A++S D + P M + A
Sbjct: 126 FLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR---------MYAPAWVA 176
Query: 255 PEYLATGHLTAK---SDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKI 311
PE L +D++SF V+L E+ V + P + L++
Sbjct: 177 PEALQKKPEDTNRRSADMWSFAVLLWEL------VTREVPFAD----------LSNMEIG 220
Query: 312 FRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQLQD 361
++ L + + L C++ + RP +V +LE++QD
Sbjct: 221 MKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 22/208 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG--HKEWLAEVNYLGQLYH 137
+G+G F V + K TG A K +N H++ E L H
Sbjct: 12 IGKGAFSVVRR---------CVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
N+V+L E+ LV++ + G L + R Y + + + ++ A
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQIL------EAV 116
Query: 198 LHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAA 254
LH + V++RD K N+LL + KL+DFGLA + GDQ GT GY +
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGDQQ-AWFGFAGTPGYLS 174
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSG 282
PE L D+++ GV+L +L G
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK------EWLAEVNYLG 133
LG G F V K + GTG A K + + + E EVN L
Sbjct: 20 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 134 QLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
++ HPN++ L +L+ E + G L + L + S + + LK L
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF-LKQILD--- 126
Query: 194 GVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVSTRVMGT 249
GV +LH ++ + D K NI LLD N KL DFG+A G++ + GT
Sbjct: 127 GVHYLHSK--RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 181
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ APE + L ++D++S GV+ +LSG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG+ +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ D GLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 27/213 (12%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
VLG+G +G V+ G + IA+K + + + + E+ L H
Sbjct: 29 VLGKGTYGIVYAG---------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG-----AAK 193
N+V+ +G E+ + E +P GSL + L R S + PL N + +G +
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSL-SALLR--SKWGPLKDN---EQTIGFYTKQILE 133
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+ +LH + ++++RD K N+L++T K+SDFG +K + + GT Y
Sbjct: 134 GLKYLH--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQY 189
Query: 253 AAPEYLATG--HLTAKSDVYSFGVVLLEMLSGR 283
APE + G +D++S G ++EM +G+
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 46/235 (19%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNY- 131
N + ++G G +G+V+KG +DE +P +AVK + F + ++ E N
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE------RP-----VAVKVFS---FANRQNFINEKNIY 59
Query: 132 -LGQLYHPNLVKLV--GYCLEDDHR---LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
+ + H N+ + + + D R LLV E+ P GSL +L S W
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSC 114
Query: 186 KVALGAAKGVAFLHGA-------ETKVIYRDFKTSNILLDTNYNAKLSDFGLA------K 232
++A +G+A+LH + + +RD + N+L+ + +SDFGL+ +
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
Query: 233 DGPTGDQSHVSTRVMGTYGYAAPEYLATG-------HLTAKSDVYSFGVVLLEML 280
G++ + + +GT Y APE L + D+Y+ G++ E+
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+++D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH--- 122
+++ R+ +P +G G +G+V +A TG +A+K+L + FQ
Sbjct: 22 EVRAVYRDLQP---VGSGAYGAVC---------SAVDGRTGAKVAIKKLYR-PFQSELFA 68
Query: 123 KEWLAEVNYLGQLYHPNLVKLVGYCLEDD------HRLLVYEFM--PRGSLENHLFRRGS 174
K E+ L + H N++ L+ D+ LV FM G L H
Sbjct: 69 KRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED 128
Query: 175 YFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDG 234
Q L + + KG+ ++H A +I+RD K N+ ++ + K+ DFGLA+
Sbjct: 129 RIQFLVYQM--------LKGLRYIHAA--GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
+ V TR Y APE + T D++S G ++ EM++G+
Sbjct: 179 DSEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 80 LGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYH 137
LG G FG V K + +A V+ +K++ K L VN+
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--LNEKRILQAVNF------ 87
Query: 138 PNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
P LVKL + +D+ L +V E++ G + +HL R G + +P + ++ L
Sbjct: 88 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 142
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR---VMGTYGYA 253
+LH + +IYRD K N+L+D +++DFG AK V R + GT Y
Sbjct: 143 YLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + + D ++ GV++ EM +G
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 28/213 (13%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHK------EWLAEVNYLG 133
LG G F V K + TG+ A K + + + + E EV+ L
Sbjct: 20 LGSGQFAIVKK---------CREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 134 QLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
Q+ HPN++ L +L+ E + G L + L ++ S + + + +K L
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF-IKQILD--- 126
Query: 194 GVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVSTRVMGT 249
GV +LH K+ + D K NI LLD N + KL DFGLA + G + + GT
Sbjct: 127 GVNYLHTK--KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGT 181
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ APE + L ++D++S GV+ +LSG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 39/198 (19%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E+ L +L HP ++K+ + +D+ +V E M G L F + N RLK
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----------FDKVVGNKRLKE 113
Query: 188 ALGAAK------GVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGD 238
A V +LH E +I+RD K N+LL + K++DFG +K G+
Sbjct: 114 ATCKLYFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGE 169
Query: 239 QSHVSTRVMGTYGYAAPEYLA---TGHLTAKSDVYSFGVVLLEMLSGRRAVDKNR----- 290
S + T + GT Y APE L T D +S GV+L LSG ++R
Sbjct: 170 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
Query: 291 ----PSGEHNLVE--WAK 302
SG++N + WA+
Sbjct: 229 KDQITSGKYNFIPEVWAE 246
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 39/198 (19%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E+ L +L HP ++K+ + +D+ +V E M G L F + N RLK
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----------FDKVVGNKRLKE 113
Query: 188 ALGAAK------GVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGD 238
A V +LH E +I+RD K N+LL + K++DFG +K G+
Sbjct: 114 ATCKLYFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGE 169
Query: 239 QSHVSTRVMGTYGYAAPEYLA---TGHLTAKSDVYSFGVVLLEMLSGRRAVDKNR----- 290
S + T + GT Y APE L T D +S GV+L LSG ++R
Sbjct: 170 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
Query: 291 ----PSGEHNLVE--WAK 302
SG++N + WA+
Sbjct: 229 KDQITSGKYNFIPEVWAE 246
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 39/198 (19%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E+ L +L HP ++K+ + +D+ +V E M G L F + N RLK
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----------FDKVVGNKRLKE 112
Query: 188 ALGAAK------GVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGD 238
A V +LH E +I+RD K N+LL + K++DFG +K G+
Sbjct: 113 ATCKLYFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGE 168
Query: 239 QSHVSTRVMGTYGYAAPEYLA---TGHLTAKSDVYSFGVVLLEMLSGRRAVDKNR----- 290
S + T + GT Y APE L T D +S GV+L LSG ++R
Sbjct: 169 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 227
Query: 291 ----PSGEHNLVE--WAK 302
SG++N + WA+
Sbjct: 228 KDQITSGKYNFIPEVWAE 245
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 27/225 (12%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKR----LNQDGFQ---GHKEW 125
++R L +G F + D + F A K ++ KR N D + ++
Sbjct: 32 DYRIIRTLNQGKFNKIILCEKD-NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
E+ + + + + G D ++YE+M S+ + YF L N
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI----LKFDEYFFVLDKNYTC 146
Query: 186 KVALGAAKGV--------AFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTG 237
+ + K + +++H E + +RD K SNIL+D N KLSDFG ++
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDFGESE--YMV 203
Query: 238 DQSHVSTRVMGTYGYAAPEYLA--TGHLTAKSDVYSFGVVLLEML 280
D+ +R GTY + PE+ + + + AK D++S G+ L M
Sbjct: 204 DKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 39/198 (19%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E+ L +L HP ++K+ + +D+ +V E M G L F + N RLK
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----------FDKVVGNKRLKE 113
Query: 188 ALGAAK------GVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGD 238
A V +LH E +I+RD K N+LL + K++DFG +K G+
Sbjct: 114 ATCKLYFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGE 169
Query: 239 QSHVSTRVMGTYGYAAPEYLA---TGHLTAKSDVYSFGVVLLEMLSGRRAVDKNR----- 290
S + T + GT Y APE L T D +S GV+L LSG ++R
Sbjct: 170 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
Query: 291 ----PSGEHNLVE--WAK 302
SG++N + WA+
Sbjct: 229 KDQITSGKYNFIPEVWAE 246
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 27/213 (12%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
VLG+G +G V+ G + IA+K + + + + E+ L H
Sbjct: 15 VLGKGTYGIVYAG---------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALG-----AAK 193
N+V+ +G E+ + E +P GSL + L R S + PL N + +G +
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSL-SALLR--SKWGPLKDN---EQTIGFYTKQILE 119
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
G+ +LH + ++++RD K N+L++T K+SDFG +K + + GT Y
Sbjct: 120 GLKYLH--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQY 175
Query: 253 AAPEYLATG--HLTAKSDVYSFGVVLLEMLSGR 283
APE + G +D++S G ++EM +G+
Sbjct: 176 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 33/216 (15%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG---HKEWLAEVNYLGQ 134
S +G G +GSV AA TG +AVK+L++ FQ K E+ L
Sbjct: 28 SPVGSGAYGSVC---------AAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 77
Query: 135 LYHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVA 188
+ H N++ L+ LE+ + LV M G+ N++ + Q L+ + +
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLI 131
Query: 189 LGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMG 248
+G+ ++H A+ +I+RD K SN+ ++ + K+ DF LA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR--- 186
Query: 249 TYGYAAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
Y APE + H D++S G ++ E+L+GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 39/198 (19%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
E+ L +L HP ++K+ + +D+ +V E M G L F + N RLK
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----------FDKVVGNKRLKE 119
Query: 188 ALGAAK------GVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGD 238
A V +LH E +I+RD K N+LL + K++DFG +K G+
Sbjct: 120 ATCKLYFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGE 175
Query: 239 QSHVSTRVMGTYGYAAPEYLA---TGHLTAKSDVYSFGVVLLEMLSGRRAVDKNR----- 290
S + T + GT Y APE L T D +S GV+L LSG ++R
Sbjct: 176 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 234
Query: 291 ----PSGEHNLVE--WAK 302
SG++N + WA+
Sbjct: 235 KDQITSGKYNFIPEVWAE 252
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+GEG +G V+K A G + RL ++ + E++ L +L H N
Sbjct: 10 IGEGTYGVVYK--------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+VKL +LV+E + + + G + + L++ G+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLL----NGIAYCH 117
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL- 258
+ +V++RD K N+L++ K++DFGLA+ G T + T Y AP+ L
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDVLM 173
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSG 282
+ + D++S G + EM++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 112/266 (42%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEFM-PRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E M P L + + RG+ + L+ + +V L
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV-L 124
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 125 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 172
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 232
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 233 SECQHLIRWCLALRPSDRPTFEEIQN 258
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT Y APE + + D ++ GV++ +M +G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+GEG +G V+K A G + RL ++ + E++ L +L H N
Sbjct: 10 IGEGTYGVVYK--------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+VKL +LV+E + + + G + + L++ G+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLL----NGIAYCH 117
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL- 258
+ +V++RD K N+L++ K++DFGLA+ G T + T Y AP+ L
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSG 282
+ + D++S G + EM++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 39/199 (19%)
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
E+ L +L HP ++K+ + +D+ +V E M G L F + N RLK
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----------FDKVVGNKRLK 237
Query: 187 VALGAAK------GVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTG 237
A V +LH E +I+RD K N+LL + K++DFG +K G
Sbjct: 238 EATCKLYFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILG 293
Query: 238 DQSHVSTRVMGTYGYAAPEYLA---TGHLTAKSDVYSFGVVLLEMLSGRRAVDKNR---- 290
+ S + T + GT Y APE L T D +S GV+L LSG ++R
Sbjct: 294 ETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS 352
Query: 291 -----PSGEHNLVE--WAK 302
SG++N + WA+
Sbjct: 353 LKDQITSGKYNFIPEVWAE 371
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
+GEG +G V+K A G + RL ++ + E++ L +L H N
Sbjct: 10 IGEGTYGVVYK--------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+VKL +LV+E + + + G + + L++ G+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLL----NGIAYCH 117
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYL- 258
+ +V++RD K N+L++ K++DFGLA+ G T + T Y AP+ L
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 259 ATGHLTAKSDVYSFGVVLLEMLSG 282
+ + D++S G + EM++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG G FG V + + TG V K +N E++ + QL+HP
Sbjct: 59 LGSGAFGVVHR---------CVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 140 LVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFL 198
L+ L ED + + L+ EF+ G L + R + +S + A +G+ +
Sbjct: 110 LINLHD-AFEDKYEMVLILEFLSGGELFD---RIAAEDYKMSEAEVINYMRQACEGLKHM 165
Query: 199 HGAETKVIYRDFKTSNILLDTNY--NAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
H E +++ D K NI+ +T + K+ DFGLA + V+T T +AAPE
Sbjct: 166 H--EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPE 220
Query: 257 YLATGHLTAKSDVYSFGVVLLEMLSG 282
+ + +D+++ GV+ +LSG
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-----KEWLAEVNYL 132
V+G+G F SV + I+ TG AVK ++ F ++ E +
Sbjct: 30 EVIGKGAF-SVVRRCINRE--------TGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
L HP++V+L+ D +V+EFM L + +R S +
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNA---KLSDFGLAKDGPTGDQSHVSTRVMGT 249
+ + + H + +I+RD K N+LL + N+ KL DFG+A G+ V+ +GT
Sbjct: 141 EALRYCH--DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRVGT 196
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ APE + DV+ GV+L +LSG
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 39/199 (19%)
Query: 127 AEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
E+ L +L HP ++K+ + +D+ +V E M G L F + N RLK
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----------FDKVVGNKRLK 251
Query: 187 VALGAAK------GVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTG 237
A V +LH E +I+RD K N+LL + K++DFG +K G
Sbjct: 252 EATCKLYFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILG 307
Query: 238 DQSHVSTRVMGTYGYAAPEYLA---TGHLTAKSDVYSFGVVLLEMLSGRRAVDKNR---- 290
+ S + T + GT Y APE L T D +S GV+L LSG ++R
Sbjct: 308 ETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS 366
Query: 291 -----PSGEHNLVE--WAK 302
SG++N + WA+
Sbjct: 367 LKDQITSGKYNFIPEVWAE 385
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 63 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 109
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 168
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S++ +R
Sbjct: 169 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 223
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 224 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 273
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 107
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 166
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S++ +R
Sbjct: 167 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 221
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 222 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 271
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 55 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 101
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 160
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S++ +R
Sbjct: 161 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 215
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 216 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 265
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 65 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 111
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 170
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S++ +R
Sbjct: 171 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 225
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 226 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 275
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 RVMGTYGYAAPEYLATGHLTAKS-----DVYSFGVVLLEMLSG 282
R G PEYLA + +K D ++ GV++ EM +G
Sbjct: 194 RTWXLCG--TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG--HKEWLAEVNYLGQLYH 137
LG+G F V + K TG A K +N H++ E L H
Sbjct: 12 LGKGAFSVVRR---------CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
PN+V+L E+ LV++ + G L + R Y+ + ++ L +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-EYYSEADASHCIQQILESVN---- 117
Query: 198 LHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAA 254
H +++RD K N+LL + KL+DFGLA + GDQ GT GY +
Sbjct: 118 -HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPGYLS 174
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSG 282
PE L D+++ GV+L +L G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 32 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 78
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 137
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S++ +R
Sbjct: 138 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 192
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 193 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 242
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 110/257 (42%), Gaps = 60/257 (23%)
Query: 77 DSVLGEGGFGSV-FKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQL 135
+ +LG G G+V F+G SF G +AVKR+ D L E+ L +
Sbjct: 20 EKILGYGSSGTVVFQG-----SFQ------GRPVAVKRMLIDFCDIA---LMEIKLLTES 65
Query: 136 Y-HPNLVKLVGYCLEDDHRLL----------VYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
HPN+++ YC E R L + + + ++ + + + P+S LR
Sbjct: 66 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISL-LR 122
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT-------------NYNAKLSDFGLA 231
A GVA LH K+I+RD K NIL+ T N +SDFGL
Sbjct: 123 -----QIASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 232 KDGPTGDQSHVSTRV---MGTYGYAAPEYLATGH-------LTAKSDVYSFGVVLLEMLS 281
K +G QS T + GT G+ APE L + LT D++S G V +LS
Sbjct: 176 KKLDSG-QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 282 GRRAVDKNRPSGEHNLV 298
+ ++ S E N++
Sbjct: 235 KGKHPFGDKYSRESNII 251
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 106 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 152
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 211
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S++ +R
Sbjct: 212 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 266
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 267 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 316
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 40 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 86
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 145
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S++ +R
Sbjct: 146 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 200
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 201 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 250
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 122/316 (38%), Gaps = 35/316 (11%)
Query: 44 PPTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKP 103
P T + L S S + + + P LG G +G V K
Sbjct: 23 PQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEK---------MRHV 73
Query: 104 GTGMVIAVKRLNQD-GFQGHKEWLAEVNY-LGQLYHPNLVKLVGYCLEDDHRLLVYEFMP 161
+G ++AVKR+ Q K L +++ + + P V G + + E M
Sbjct: 74 PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM- 132
Query: 162 RGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNY 221
SL+ + Q + ++ K+A+ K + LH ++ VI+RD K SN+L++
Sbjct: 133 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALG 191
Query: 222 NAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY----LATGHLTAKSDVYSFGVVLL 277
K+ DFG++ G D S T G Y APE L + KSD++S G+ ++
Sbjct: 192 QVKMCDFGIS--GYLVD-SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 248
Query: 278 EMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIIDNRLEGQYTLEGAYKAATLALR 337
E+ R D W P+ K+ + +++ E +
Sbjct: 249 ELAILRFPYD-----------SWGTPFQQLKQVVEEPSPQLPADKFSAE----FVDFTSQ 293
Query: 338 CLSTEGKFRPMMAEVV 353
CL K RP E++
Sbjct: 294 CLKKNSKERPTYPELM 309
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 132
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S++ +R
Sbjct: 133 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 188 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 237
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 44/219 (20%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH---KEWLAEVNYLGQLY 136
+G G +GSV ID+ S G +A+K+L++ FQ K E+ L +
Sbjct: 32 VGSGAYGSVCSA-IDKRS--------GEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQ 81
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLEN--HLFRRGSYFQP-LSWNLRLK------- 186
H N++ L+ F P SL N + + Q L + LK
Sbjct: 82 HENVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQ 129
Query: 187 -VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
+ KG+ ++H A V++RD K N+ ++ + K+ DFGLA+ +V TR
Sbjct: 130 YLVYQMLKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 187
Query: 246 VMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEMLSGR 283
Y APE L+ H D++S G ++ EML+G+
Sbjct: 188 -----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQG--HKEWLAEVNYLGQLYH 137
LG+G F V + K TG A K +N H++ E L H
Sbjct: 12 LGKGAFSVVRR---------CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAF 197
PN+V+L E+ LV++ + G L + R Y+ + ++ L +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-EYYSEADASHCIQQILESVN---- 117
Query: 198 LHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAA 254
H +++RD K N+LL + KL+DFGLA + GDQ GT GY +
Sbjct: 118 -HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPGYLS 174
Query: 255 PEYLATGHLTAKSDVYSFGVVLLEMLSG 282
PE L D+++ GV+L +L G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query: 86 GSVFKGWIDEHSFAATK----PGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLV 141
G V K I S++ K T M AVK +++ +E + Y GQ HPN++
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRY-GQ--HPNII 84
Query: 142 KLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGA 201
L + H LV E M G L + + R+ +F + L K V +LH
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQ-KFFSEREASFVLHTI---GKTVEYLHSQ 140
Query: 202 ETKVIYRDFKTSNIL-LDTNYNA---KLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEY 257
V++RD K SNIL +D + N ++ DFG AK ++ + T + APE
Sbjct: 141 --GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ--LRAENGLLMTPCYTANFVAPEV 196
Query: 258 LATGHLTAKSDVYSFGVVLLEMLSG 282
L D++S G++L ML+G
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 107
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 166
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S + +R
Sbjct: 167 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 221
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 222 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 271
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 43/240 (17%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWL 126
+T R+ +G+G +G V++G W E+ +AVK + + K W
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 48
Query: 127 AEVNYLG--QLYHPNLVKLVGYCLEDDHR----LLVYEFMPRGSLENHLFRRGSYFQPLS 180
E L H N++ + + H L+ + GSL ++L L
Sbjct: 49 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLD 103
Query: 181 WNLRLKVALGAAKGVAFLH----GAETK--VIYRDFKTSNILLDTNYNAKLSDFGLA-KD 233
L++ L A G+A LH G + K + +RD K+ NIL+ N ++D GLA
Sbjct: 104 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163
Query: 234 GPTGDQSHVSTR-VMGTYGYAAPEYL-ATGHLTA-----KSDVYSFGVVLLEMLSGRRAV 286
+ +Q V +GT Y APE L T + + D+++FG+VL E+ RR V
Sbjct: 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 96/240 (40%), Gaps = 53/240 (22%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+F +VLG+G FG V K A A+K++ + L+EV L
Sbjct: 7 DFEEIAVLGQGAFGQVVK---------ARNALDSRYYAIKKIRHTE-EKLSTILSEVXLL 56
Query: 133 GQLYHPNLVKLVGYCLEDDH-------------RLLVYEFMPRGSL------ENHLFRRG 173
L H +V+ LE + + E+ +L EN +R
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD 116
Query: 174 SYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAK- 232
Y W L ++ + ++++H +I+R+ K NI +D + N K+ DFGLAK
Sbjct: 117 EY-----WRLFRQIL----EALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKN 165
Query: 233 -----DGPTGDQSHVS------TRVMGTYGYAAPEYL-ATGHLTAKSDVYSFGVVLLEML 280
D D ++ T +GT Y A E L TGH K D YS G++ E +
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 74 FRPDSVLGEGGFGSVFKGWID-EHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ DS++G+G FG V K + E + A K +I K+ + Q L +N
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIK-----IIKNKKAFLNQAQIEVRLLELMNKH 91
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+V L + + +H LV+E + S + R + F+ +S NL K A
Sbjct: 92 DTEMKYYIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRKFAQQMC 148
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
+ FL E +I+ D K NILL N K S + G + + + + Y
Sbjct: 149 TALLFLATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFY 205
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+PE L D++S G +L+EM +G
Sbjct: 206 RSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 21/226 (9%)
Query: 65 SDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATK----PGTGMVIAVKRLNQDGFQ 120
S + T N S++ G+ V K I S++ K T M AVK +++
Sbjct: 9 SGVDLGTENLYFQSMVFSDGY--VVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRD 66
Query: 121 GHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLS 180
+E + Y GQ HPN++ L + H LV E M G L + + R+ +F
Sbjct: 67 PSEEIEILLRY-GQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ-KFFSERE 122
Query: 181 WNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNIL-LDTNYNA---KLSDFGLAKDGPT 236
+ L K V +LH V++RD K SNIL +D + N ++ DFG AK
Sbjct: 123 ASFVLHTI---GKTVEYLHSQ--GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ--L 175
Query: 237 GDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
++ + T + APE L D++S G++L ML+G
Sbjct: 176 RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 74 FRPDSVLGEGGFGSVFKGWID-EHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ DS++G+G FG V K + E + A K +I K+ + Q L +N
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIK-----IIKNKKAFLNQAQIEVRLLELMNKH 110
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+V L + + +H LV+E + S + R + F+ +S NL K A
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRKFAQQMC 167
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
+ FL E +I+ D K NILL N K S + G + + + + Y
Sbjct: 168 TALLFLATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFY 224
Query: 253 AAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+PE L D++S G +L+EM +G
Sbjct: 225 RSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 122
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 57/260 (21%)
Query: 46 TPRSEGEILRSPNLKSFSFSDL-KTA---TRNFRPDSVLGEGGFGSVFKGWIDEHSFAAT 101
PR ++R K F D+ KTA + + + +G G +GSV ID+ S
Sbjct: 15 VPRGSMSLIRK---KGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSA-IDKRS---- 66
Query: 102 KPGTGMVIAVKRLNQDGFQGH---KEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYE 158
G +A+K+L++ FQ K E+ L + H N++ L+
Sbjct: 67 ----GEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQHENVIGLLDV------------ 109
Query: 159 FMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA--------------KGVAFLHGAETK 204
F P SL N F P L+ +G KG+ ++H A
Sbjct: 110 FTPASSLRN--FYDFYLVMPFM-QTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA--G 164
Query: 205 VIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE-YLATGHL 263
V++RD K N+ ++ + K+ DFGLA+ +V TR Y APE L+ H
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHY 219
Query: 264 TAKSDVYSFGVVLLEMLSGR 283
D++S G ++ EML+G+
Sbjct: 220 NQTVDIWSVGCIMAEMLTGK 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 85
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 144
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S + +R
Sbjct: 145 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 199
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 200 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 249
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+ AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 204 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 35/235 (14%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 35 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 81
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 140
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQSHVSTRVMGT 249
+ +A++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 141 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSR 194
Query: 250 YGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 195 Y-YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 245
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 43/240 (17%)
Query: 68 KTATRNFRPDSVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWL 126
+T R +G+G +G V++G W E+ +AVK + + K W
Sbjct: 33 RTVARQITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 77
Query: 127 AEVNYLG--QLYHPNLVKLVGYCLEDDHR----LLVYEFMPRGSLENHLFRRGSYFQPLS 180
E L H N++ + + H L+ + GSL ++L L
Sbjct: 78 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLD 132
Query: 181 WNLRLKVALGAAKGVAFLH----GAETK--VIYRDFKTSNILLDTNYNAKLSDFGLA-KD 233
L++ L A G+A LH G + K + +RD K+ NIL+ N ++D GLA
Sbjct: 133 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 192
Query: 234 GPTGDQSHVSTR-VMGTYGYAAPEYL-ATGHLTA-----KSDVYSFGVVLLEMLSGRRAV 286
+ +Q V +GT Y APE L T + + D+++FG+VL E+ RR V
Sbjct: 193 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 250
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+ AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 199 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 35/235 (14%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 46 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 92
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 151
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQSHVSTRVMGT 249
+ +A++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 152 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSR 205
Query: 250 YGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 206 Y-YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 256
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+ AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 206 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
+ AKG+ FL A K I+RD NILL K+ DFGLA+D
Sbjct: 197 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 248 GTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLS 281
+ APE + T +SDV+SFGV+L E+ S
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 19/161 (11%)
Query: 126 LAEVNYLGQLYHPNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L E L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVST 244
++ L +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 245 R---VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
R + GT APE + + D ++ GV++ EM +G
Sbjct: 194 RTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 35/235 (14%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 132
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQSHVSTRVMGT 249
+ +A++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSR 186
Query: 250 YGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 187 Y-YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 237
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 35/235 (14%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 132
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQSHVSTRVMGT 249
+ +A++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSR 186
Query: 250 YGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 187 Y-YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 237
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 85
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 144
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S + +R
Sbjct: 145 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 199
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 200 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 249
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 135 LYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
L HPN+V+ L H +V E+ G L + G + + + ++ G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----ISG 127
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTN--YNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
V++ H +V +RD K N LLD + K+ DFG +K Q + +GT Y
Sbjct: 128 VSYCHA--MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAY 182
Query: 253 AAPEYLATGHLTAK-SDVYSFGVVLLEMLSG 282
APE L K +DV+S GV L ML G
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 35/235 (14%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 28 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 74
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 133
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQSHVSTRVMGT 249
+ +A++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 134 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSR 187
Query: 250 YGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 188 Y-YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 238
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 132
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S++ +R
Sbjct: 133 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 188 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 237
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 31 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 77
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 136
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S + +R
Sbjct: 137 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 191
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 192 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 241
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 135 LYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
L HPN+V+ L H +V E+ G L + G + + + ++ G
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----ISG 126
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTN--YNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
V++ H +V +RD K N LLD + K+ DFG +K Q + +GT Y
Sbjct: 127 VSYCHA--MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAY 181
Query: 253 AAPEYLATGHLTAK-SDVYSFGVVLLEMLSG 282
APE L K +DV+S GV L ML G
Sbjct: 182 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 132
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S++ +R
Sbjct: 133 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 188 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 237
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 122
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 153
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 154 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 201
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 261
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 262 SECQHLIRWCLALRPSDRPTFEEIQN 287
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 29/232 (12%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QD ++E + + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 73
Query: 139 NLVKLVGYCLED-DHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR-LKVAL---GAAK 193
N+V+L + + + +VY + + ++R ++ L + V L +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
+A++H + +RD K N+LLD + KL DFG AK G+ + + + Y Y
Sbjct: 134 SLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY-Y 188
Query: 253 AAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 189 RAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 237
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 104 GTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRG 163
T M AVK +++ +E + Y GQ HPN++ L + + +V E M G
Sbjct: 45 ATNMEFAVKIIDKSKRDPTEEIEILLRY-GQ--HPNIITLKDVYDDGKYVYVVTELMKGG 101
Query: 164 SLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNIL-LDTNYN 222
L + + R+ + S V K V +LH V++RD K SNIL +D + N
Sbjct: 102 ELLDKILRQKFF----SEREASAVLFTITKTVEYLHAQ--GVVHRDLKPSNILYVDESGN 155
Query: 223 ---AKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEM 279
++ DFG AK ++ + T + APE L A D++S GV+L M
Sbjct: 156 PESIRICDFGFAKQ--LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTM 213
Query: 280 LSG 282
L+G
Sbjct: 214 LTG 216
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 125
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 126 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 173
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 234 SECQHLIRWCLALRPSDRPTFEEIQN 259
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 139
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 140 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 187
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 247
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 248 SECQHLIRWCLALRPSDRPTFEEIQN 273
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 140
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 141 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 188
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 248
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 249 SECQHLIRWCLALRPSDRPTFEEIQN 274
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 153
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 154 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 201
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 261
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 262 SECQHLIRWCLALRPSDRPTFEEIQN 287
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 153 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 200
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 260
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 261 SECQHLIRWCLALRPSDRPTFEEIQN 286
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 122
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 28/283 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G F +FKG E T +++ V L++ + + + + +L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKV--LDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV G C+ D +LV EF+ GSL+ +L + + L W +L+VA A + FL
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAAAMHFLE 130
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--VMGTYGYAAPEY 257
E +I+ + NILL + K + K G V + + + PE
Sbjct: 131 --ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC 188
Query: 258 LAT-GHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIID 316
+ +L +D +SFG L E+ SG G+ L L S+RK+ + +
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSG----------GDKPL-----SALDSQRKL-QFYE 232
Query: 317 NRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQL 359
+R Q A + A L C+ E RP ++ L L
Sbjct: 233 DR--HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 135 LYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
L HPN+V+ L H ++ E+ G L + G + + + ++ G
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL----LSG 128
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTN--YNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
V++ H + + +RD K N LLD + K+ DFG +K Q + +GT Y
Sbjct: 129 VSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAY 183
Query: 253 AAPEYLATGHLTAK-SDVYSFGVVLLEMLSG 282
APE L K +DV+S GV L ML G
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 124
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 125 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 172
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 232
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 233 SECQHLIRWCLALRPSDRPTFEEIQN 258
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 122
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 125
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 126 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 173
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 234 SECQHLIRWCLALRPSDRPTFEEIQN 259
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 122
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--- 174
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 153 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 200
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 260
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 261 SECQHLIRWCLALRPSDRPTFEEIQN 286
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 105/252 (41%), Gaps = 54/252 (21%)
Query: 77 DSVLGEGGFGSV-FKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQL 135
+ +LG G G+V F+G SF G +AVKR+ D L E+ L +
Sbjct: 38 EKILGYGSSGTVVFQG-----SFQ------GRPVAVKRMLIDFCDIA---LMEIKLLTES 83
Query: 136 Y-HPNLVKLVGYCLEDDHRLL----------VYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
HPN+++ YC E R L + + + ++ + + + P+S LR
Sbjct: 84 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISL-LR 140
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT-------------NYNAKLSDFGLA 231
A GVA LH K+I+RD K NIL+ T N +SDFGL
Sbjct: 141 -----QIASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 232 KDGPTGDQSHVS--TRVMGTYGYAAPEYLATG---HLTAKSDVYSFGVVLLEMLSGRRAV 286
K +G GT G+ APE L LT D++S G V +LS +
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
Query: 287 DKNRPSGEHNLV 298
++ S E N++
Sbjct: 254 FGDKYSRESNII 265
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 153 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 200
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 260
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 261 SECQHLIRWCLALRPSDRPTFEEIQN 286
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 105/252 (41%), Gaps = 54/252 (21%)
Query: 77 DSVLGEGGFGSV-FKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQL 135
+ +LG G G+V F+G SF G +AVKR+ D L E+ L +
Sbjct: 38 EKILGYGSSGTVVFQG-----SFQ------GRPVAVKRMLIDFCDIA---LMEIKLLTES 83
Query: 136 Y-HPNLVKLVGYCLEDDHRLL----------VYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
HPN+++ YC E R L + + + ++ + + + P+S LR
Sbjct: 84 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISL-LR 140
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT-------------NYNAKLSDFGLA 231
A GVA LH K+I+RD K NIL+ T N +SDFGL
Sbjct: 141 -----QIASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 232 KDGPTGDQSHVS--TRVMGTYGYAAPEYLATG---HLTAKSDVYSFGVVLLEMLSGRRAV 286
K +G GT G+ APE L LT D++S G V +LS +
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
Query: 287 DKNRPSGEHNLV 298
++ S E N++
Sbjct: 254 FGDKYSRESNII 265
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 122
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--- 174
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 122
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--- 174
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 125
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 126 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 173
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 234 SECQHLIRWCLALRPSDRPTFEEIQN 259
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 167
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 168 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 215
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 275
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 276 SECQHLIRWCLALRPSDRPTFEEIQN 301
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 121
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 122 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--- 173
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 121
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 122 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--- 173
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + D++S GV++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 14 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 123
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 124 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 171
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 172 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 231
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 232 SECQHLIRWCLALRPSDRPTFEEIQN 257
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 50 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 159
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 160 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 207
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 267
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 268 SECQHLIRWCLALRPSDRPTFEEIQN 293
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 74 FRPDSVLGEGGFGSVFKGWID-EHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYL 132
+ DS++G+G FG V K + E + A K +I K+ + Q L +N
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIK-----IIKNKKAFLNQAQIEVRLLELMNKH 110
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
+V L + + +H LV+E + S + R + F+ +S NL K A
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRKFAQQMC 167
Query: 193 KGVAFLHGAETKVIYRDFKTSNILL--DTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+ FL E +I+ D K NILL K+ DFG + + +R
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRF---- 223
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
Y +PE L D++S G +L+EM +G
Sbjct: 224 -YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 139
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 140 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 187
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 247
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 248 XECQHLIRWCLALRPSDRPTFEEIQN 273
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 122
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + D++S GV++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 122
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 122
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 40/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG VF+ + E +A+K++ QD ++ E+ + + HP
Sbjct: 47 VIGNGSFGVVFQAKLVESD----------EVAIKKVLQDKRFKNR----ELQIMRIVKHP 92
Query: 139 NLVKLVGYCLEDDHRL------LVYEFMPRGSLENHLFRRGSYFQPLSWN---LRLKVAL 189
N+V L + + + LV E++P ++R ++ L L +K+ +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPET-----VYRASRHYAKLKQTMPMLLIKLYM 147
Query: 190 -GAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQSHVSTRVM 247
+ +A++H + +RD K N+LLD KL DFG AK G+ + + +
Sbjct: 148 YQLLRSLAYIHS--IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSXIC 203
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y Y APE + AT + T D++S G V+ E++ G+ SG LVE K
Sbjct: 204 SRY-YRAPELIFGATNY-TTNIDIWSTGCVMAELMQGQPLFPGE--SGIDQLVEIIK 256
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 135 LYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
L HPN+V+ L H +V E+ G L + G + + + ++ G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----ISG 127
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTN--YNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
V++ H +V +RD K N LLD + K++DFG +K Q + +GT Y
Sbjct: 128 VSYAHA--MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA---VGTPAY 182
Query: 253 AAPEYLATGHLTAK-SDVYSFGVVLLEMLSG 282
APE L K +DV+S GV L ML G
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-LKQ 122
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--- 174
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 167
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 168 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 215
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 275
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 276 XECQHLIRWCLALRPSDRPTFEEIQN 301
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 120
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 121 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 168
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 228
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 229 SECQHLIRWCLALRPSDRPTFEEIQN 254
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 153
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 154 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 201
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 261
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 262 XECQHLIRWCLALRPSDRPTFEEIQN 287
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 153
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 154 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 201
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 261
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 262 XECQHLIRWCLALRPSDRPTFEEIQN 287
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 140
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 141 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 188
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 248
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 249 XECQHLIRWCLALRPSDRPTFEEIQN 274
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 152
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 153 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 200
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 260
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 261 XECQHLIRWCLALRPSDRPTFEEIQN 286
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 120
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 121 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 168
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 228
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 229 SECQHLIRWCLALRPSDRPTFEEIQN 254
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 118/299 (39%), Gaps = 52/299 (17%)
Query: 66 DLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKR-LNQDGFQGHKE 124
D + +R +LG+GGFG+VF G H VI R L
Sbjct: 25 DREAFEAEYRLGPLLGKGGFGTVFAG----HRLTDRLQVAIKVIPRNRVLGWSPLSDSVT 80
Query: 125 WLAEVNYLGQLY----HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPL 179
EV L ++ HP +++L+ + + +LV E +P L +++ +G +
Sbjct: 81 CPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP 140
Query: 180 SWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN-AKLSDFG---LAKDGP 235
S +V A H V++RD K NIL+D AKL DFG L D P
Sbjct: 141 SRCFFGQVV------AAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP 194
Query: 236 TGDQSHVSTRVMGTYGYAAPEYLATGHLTA-KSDVYSFGVVLLEMLSGRRAVDKNRPSGE 294
D GT Y+ PE+++ A + V+S G++L +M+ G ++++
Sbjct: 195 YTDFD-------GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---- 243
Query: 295 HNLVEWAKPYLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
I++ L + + L RCL+ + RP + E++
Sbjct: 244 ------------------EILEAEL--HFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
+G+ ++H A +I+RD K SN+ ++ + ++ DFGLA+ +V+TR Y
Sbjct: 134 RGLKYIHSA--GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WY 186
Query: 253 AAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
APE + H D++S G ++ E+L G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 102/245 (41%), Gaps = 30/245 (12%)
Query: 44 PPTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKP 103
P T +EG +L + LK + + + LG G FG V +
Sbjct: 46 PETEDNEG-VLLTEKLKPVDY-EYREEVHWMTHQPRLGRGSFGEVHR---------MKDK 94
Query: 104 GTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRG 163
TG AVK++ + F+ + E+ L P +V L G E + E + G
Sbjct: 95 QTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 149
Query: 164 SLENHLFRRGSYFQPLSWNLRLKVALGAA-KGVAFLHGAETKVIYRDFKTSNILLDTN-Y 221
SL + + G + R LG A +G+ +LH ++++ D K N+LL ++
Sbjct: 150 SLGQLIKQMGCLPED-----RALYYLGQALEGLEYLH--TRRILHGDVKADNVLLSSDGS 202
Query: 222 NAKLSDFG----LAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLL 277
A L DFG L DG G + GT + APE + AK D++S ++L
Sbjct: 203 RAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 261
Query: 278 EMLSG 282
ML+G
Sbjct: 262 HMLNG 266
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 28/283 (9%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPN 139
LG+G F +FKG E T +++ V L++ + + + + +L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKV--LDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
LV G C D +LV EF+ GSL+ +L + + L W +L+VA A + FL
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAWAMHFLE 130
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR--VMGTYGYAAPEY 257
E +I+ + NILL + K + K G V + + + PE
Sbjct: 131 --ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC 188
Query: 258 LAT-GHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLASKRKIFRIID 316
+ +L +D +SFG L E+ SG ++P L S+RK+ + +
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSG-----GDKPLSA----------LDSQRKL-QFYE 232
Query: 317 NRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVLEQL 359
+R Q A + A L C+ E RP ++ L L
Sbjct: 233 DR--HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 38 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 147
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 148 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 195
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 196 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 255
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 256 XECQHLIRWCLALRPSDRPTFEEIQN 281
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 63 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 172
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 173 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 220
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 280
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 281 XECQHLIRWCLALRPSDRPTFEEIQN 306
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
+G+ ++H A +I+RD K SN+ ++ + ++ DFGLA+ +V+TR Y
Sbjct: 142 RGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 253 AAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
APE + H D++S G ++ E+L G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
+G+ ++H A +I+RD K SN+ ++ + ++ DFGLA+ +V+TR Y
Sbjct: 142 RGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 253 AAPEYLATG-HLTAKSDVYSFGVVLLEMLSGR 283
APE + H D++S G ++ E+L G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 120
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 121 EAVR-----HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 168
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 228
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W S R F I N
Sbjct: 229 XECQHLIRWCLALRPSDRPTFEEIQN 254
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 39/237 (16%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
V+G G FG V++ + + +G ++A+K++ QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SLENHLFRRGSYFQPLSWNLRLKVALG 190
N+V+L G ++ + LV +++P + H R + L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF- 132
Query: 191 AAKGVAFLHGAETKVIYRDFKTSNILLDTNYNA-KLSDFGLAKDGPTGDQ--SHVSTRVM 247
+ +A++H + +RD K N+LLD + KL DFG AK G+ S + +R
Sbjct: 133 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 248 GTYGYAAPEYL--ATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAK 302
Y APE + AT + T+ DV+S G VL E+L G+ + SG LVE K
Sbjct: 188 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 237
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L ++ HPN++ L +L+ E + G L + L + S + + LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEF-LKQ 122
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
L GV +LH + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 ILN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--- 174
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L Q+ H N++ L +L+ E + G L + L ++ S + + + ++
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
GV +LH K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 125 L----DGVNYLHTK--KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L Q+ H N++ L +L+ E + G L + L ++ S + + + ++
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
GV +LH K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 125 L----DGVNYLHTK--KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L Q+ H N++ L +L+ E + G L + L ++ S + + + ++
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
GV +LH K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 125 L----DGVNYLHTK--KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 42/246 (17%)
Query: 56 SPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLN 115
S N+ F DL + + +P LG GG G VF +A +A+K++
Sbjct: 1 SMNIHGF---DLGSRYMDLKP---LGCGGNGLVF---------SAVDNDCDKRVAIKKIV 45
Query: 116 QDGFQGHKEWLAEVNYLGQLYHPNLVKL--------------VGYCLEDDHRLLVYEFMP 161
Q K L E+ + +L H N+VK+ VG E + +V E+M
Sbjct: 46 LTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM- 104
Query: 162 RGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT-N 220
L N + +G L + RL +G+ ++H A V++RD K +N+ ++T +
Sbjct: 105 ETDLAN-VLEQGPL---LEEHARL-FMYQLLRGLKYIHSA--NVLHRDLKPANLFINTED 157
Query: 221 YNAKLSDFGLAK--DGPTGDQSHVSTRVMGTYGYAAPEYLAT-GHLTAKSDVYSFGVVLL 277
K+ DFGLA+ D + H+S ++ T Y +P L + + T D+++ G +
Sbjct: 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFA 216
Query: 278 EMLSGR 283
EML+G+
Sbjct: 217 EMLTGK 222
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLG--QLY 136
+G+G +G V++G W E+ +AVK + + K W E L
Sbjct: 16 VGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWFRETELYNTVMLR 60
Query: 137 HPNLVKLVGYCLEDDHR----LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
H N++ + + H L+ + GSL ++L L L++ L A
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIA 115
Query: 193 KGVAFLH----GAETK--VIYRDFKTSNILLDTNYNAKLSDFGLA-KDGPTGDQSHVSTR 245
G+A LH G + K + +RD K+ NIL+ N ++D GLA + +Q V
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 246 -VMGTYGYAAPEYL-ATGHLTA-----KSDVYSFGVVLLEMLSGRRAV 286
+GT Y APE L T + + D+++FG+VL E+ RR V
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 139 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + D++S G ++ EM+ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L Q+ H N++ L +L+ E + G L + L ++ S + + + ++
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
GV +LH K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 125 L----DGVNYLHTK--KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKV 187
EV+ L Q+ H N++ L +L+ E + G L + L ++ S + + + ++
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 188 ALGAAKGVAFLHGAETKVIYRDFKTSNI-LLDTNY---NAKLSDFGLAKDGPTGDQSHVS 243
GV +LH K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 125 L----DGVNYLHTK--KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 118/297 (39%), Gaps = 43/297 (14%)
Query: 67 LKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQD-GFQGHKEW 125
++ + P LG G +G V K +G ++AVKR+ Q K
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEK---------MRHVPSGQIMAVKRIRATVNSQEQKRL 52
Query: 126 LAEVNY-LGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
L +++ + + P V G + + E M SL+ + Q + ++
Sbjct: 53 LMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDIL 111
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGL--------AKDGPT 236
K+A+ K + LH ++ VI+RD K SN+L++ K+ DFG+ AKD
Sbjct: 112 GKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 237 GDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHN 296
G + +++ + PE G+ + KSD++S G+ ++E+ R D
Sbjct: 171 GCKPYMAPERIN------PELNQKGY-SVKSDIWSLGITMIELAILRFPYD--------- 214
Query: 297 LVEWAKPYLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVV 353
W P+ K+ + +++ E +CL K RP E++
Sbjct: 215 --SWGTPFQQLKQVVEEPSPQLPADKFSAE----FVDFTSQCLKKNSKERPTYPELM 265
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 106/256 (41%), Gaps = 58/256 (22%)
Query: 77 DSVLGEGGFGSV-FKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQL 135
+ +LG G G+V F+G SF G +AVKR+ D L E+ L +
Sbjct: 20 EKILGYGSSGTVVFQG-----SFQ------GRPVAVKRMLIDFCDIA---LMEIKLLTES 65
Query: 136 Y-HPNLVKLVGYCLEDDHRLL----------VYEFMPRGSLENHLFRRGSYFQPLSWNLR 184
HPN+++ YC E R L + + + ++ + + + P+S LR
Sbjct: 66 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISL-LR 122
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDT-------------NYNAKLSDFGLA 231
A GVA LH K+I+RD K NIL+ T N +SDFGL
Sbjct: 123 -----QIASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 232 KDGPTGDQSHVS--TRVMGTYGYAAPEYLATGH-------LTAKSDVYSFGVVLLEMLSG 282
K +G GT G+ APE L + LT D++S G V +LS
Sbjct: 176 KKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 283 RRAVDKNRPSGEHNLV 298
+ ++ S E N++
Sbjct: 236 GKHPFGDKYSRESNII 251
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 102/245 (41%), Gaps = 30/245 (12%)
Query: 44 PPTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKP 103
P T +EG +L + LK + + + +G G FG V +
Sbjct: 48 PETEDNEG-VLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEVHR---------MKDK 96
Query: 104 GTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRG 163
TG AVK++ + F+ + E+ L P +V L G E + E + G
Sbjct: 97 QTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 151
Query: 164 SLENHLFRRGSYFQPLSWNLRLKVALGAA-KGVAFLHGAETKVIYRDFKTSNILLDTN-Y 221
SL + + G + R LG A +G+ +LH ++++ D K N+LL ++
Sbjct: 152 SLGQLIKQMGCLPED-----RALYYLGQALEGLEYLH--TRRILHGDVKADNVLLSSDGS 204
Query: 222 NAKLSDFG----LAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLL 277
A L DFG L DG G + GT + APE + AK D++S ++L
Sbjct: 205 RAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 263
Query: 278 EMLSG 282
ML+G
Sbjct: 264 HMLNG 268
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 102/245 (41%), Gaps = 30/245 (12%)
Query: 44 PPTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKP 103
P T +EG +L + LK + + + +G G FG V +
Sbjct: 32 PETEDNEG-VLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEVHR---------MKDK 80
Query: 104 GTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRG 163
TG AVK++ + F+ + E+ L P +V L G E + E + G
Sbjct: 81 QTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135
Query: 164 SLENHLFRRGSYFQPLSWNLRLKVALGAA-KGVAFLHGAETKVIYRDFKTSNILLDTN-Y 221
SL + + G + R LG A +G+ +LH ++++ D K N+LL ++
Sbjct: 136 SLGQLIKQMGCLPED-----RALYYLGQALEGLEYLH--TRRILHGDVKADNVLLSSDGS 188
Query: 222 NAKLSDFG----LAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLL 277
A L DFG L DG G + GT + APE + AK D++S ++L
Sbjct: 189 RAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 247
Query: 278 EMLSG 282
ML+G
Sbjct: 248 HMLNG 252
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 38/223 (17%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF-QGHKEWLAEVNYLGQLYH 137
+LG+G +VF+G TG + A+K N F + + E L +L H
Sbjct: 16 ILGQGATANVFRG---------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66
Query: 138 PNLVKLVGYCLEDD----HRLLVYEFMPRGSLENHLFR-RGSYFQPLS-WNLRLKVALGA 191
N+VKL + +E++ H++L+ EF P GSL L +Y P S + + L+ +G
Sbjct: 67 KNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILL----DTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
H E +++R+ K NI+ D KL+DFG A++ D+ VS +
Sbjct: 125 MN-----HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDDEQFVS--LY 176
Query: 248 GTYGYAAPEYLATGHLT--------AKSDVYSFGVVLLEMLSG 282
GT Y P+ L A D++S GV +G
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Query: 128 EVNYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRG-SLENHLFRRGSYFQPLSWNLRLK 186
E G+L P++V + + E D +L V + G L L R+G P +
Sbjct: 84 EARTAGRLQEPHVVPIHDFG-EIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRA------ 136
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRV 246
VA+ G A +RD K NIL+ + A L DFG+A T ++
Sbjct: 137 VAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIAS-ATTDEKLTQLGNT 195
Query: 247 MGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+GT Y APE + H T ++D+Y+ VL E L+G
Sbjct: 196 VGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 49/266 (18%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW------LAEVNYL 132
+LG GGFGSV+ G + + +A+K + +D E EV L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 133 GQLY--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSLENHLFRRGSYFQPLSWNLRLKVAL 189
++ +++L+ + D +L+ E P L + + RG+ + L+ + +V L
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 140
Query: 190 GAAKGVAFLHGAETKVIYRDFKTSNILLDTNY-NAKLSDFG---LAKDGPTGDQSHVSTR 245
A + H V++RD K NIL+D N KL DFG L KD V T
Sbjct: 141 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 188
Query: 246 VMGTYGYAAPEYLATGHLTAKS-DVYSFGVVLLEMLSGRRAVD------------KNRPS 292
GT Y+ PE++ +S V+S G++L +M+ G + + R S
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 248
Query: 293 GE-HNLVEWAKPYLASKRKIFRIIDN 317
E +L+ W R F I N
Sbjct: 249 XECQHLIRWCLALRPXDRPTFEEIQN 274
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGL--AKDGPTGDQSHV 242
L + + A+ V FLH +++RD K SNI + K+ DFGL A D +Q+ +
Sbjct: 167 LHIFIQIAEAVEFLHSK--GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 243 STR--------VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEML 280
+ +GT Y +PE + + + K D++S G++L E+L
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKE-WLAEV 129
+F P +G GGFG VF K +D+ ++ A+KR+ + +E + EV
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNY-----------AIKRIRLPNRELAREKVMREV 55
Query: 130 NYLGQLYHPNLVKLVGYCLE 149
L +L HP +V+ LE
Sbjct: 56 KALAKLEHPGIVRYFNAWLE 75
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 100/245 (40%), Gaps = 60/245 (24%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ--DGFQGHKEWLAEVN 130
N+ ++G G +G V+ A T +A+K++N+ + K L E+
Sbjct: 27 NYIIKHLIGRGSYGYVY---------LAYDKNTEKNVAIKKVNRMFEDLIDCKRILREIT 77
Query: 131 YLGQLYHPNLVKLVGYCLEDD-----HRLLVYEFMP---RGSLENHLFRRGSYFQPLSWN 182
L +L +++L + DD +V E + + +F + + + +N
Sbjct: 78 ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYN 137
Query: 183 LRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKD--------- 233
L L G F+H E+ +I+RD K +N LL+ + + K+ DFGLA+
Sbjct: 138 LLL--------GENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNI 187
Query: 234 ----------GPTGDQ------SHVSTRVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVL 276
GP SHV TR Y APE L + T D++S G +
Sbjct: 188 VNDLEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIF 242
Query: 277 LEMLS 281
E+L+
Sbjct: 243 AELLN 247
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT---NFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + A D++S G ++ E++ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + + T Y
Sbjct: 140 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYR 194
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + D++S G ++ EM+ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 35/213 (16%)
Query: 80 LGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYHP 138
L E G ++KG W G +V+ V ++ + +++ E L HP
Sbjct: 18 LNENHSGELWKGRWQ----------GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 139 NLVKLVGYCLEDD--HRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
N++ ++G C H L+ + P GSL N + G+ F + + +K AL A+G A
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWXPYGSLYN-VLHEGTNFV-VDQSQAVKFALDXARGXA 125
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPE 256
FLH E + + ++ +D + A++S + V AP
Sbjct: 126 FLHTLEPLIPRHALNSRSVXIDEDXTARIS------------XADVKFSFQSPGRXYAPA 173
Query: 257 YLATGHLTAK--------SDVYSFGVVLLEMLS 281
++A L K +D +SF V+L E+++
Sbjct: 174 WVAPEALQKKPEDTNRRSADXWSFAVLLWELVT 206
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 135 LYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
L HPN+V+ L H +V E+ G L + G + + + ++ G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----ISG 127
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTN--YNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
V++ H +V +RD K N LLD + K+ FG +K Q + +GT Y
Sbjct: 128 VSYCHA--MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VGTPAY 182
Query: 253 AAPEYLATGHLTAK-SDVYSFGVVLLEMLSG 282
APE L K +DV+S GV L ML G
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 122/303 (40%), Gaps = 62/303 (20%)
Query: 78 SVLGEGGFGSVFKG-WIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
++G+G FG V+ G W H A + +I ++R N+D + K EV Q
Sbjct: 39 ELIGKGRFGQVYHGRW---HGEVAIR-----LIDIERDNEDQLKAFKR---EVMAYRQTR 87
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
H N+V +G C+ H L + + +G + R L N ++A KG+
Sbjct: 88 HENVVLFMGACMSPPH-LAIITSLCKGRTLYSVVRDAKIV--LDVNKTRQIAQEIVKGMG 144
Query: 197 FLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGL------AKDGPTGDQSHVSTRVMGTY 250
+LH ++++D K+ N+ D N ++DFGL + G D+ + G
Sbjct: 145 YLHA--KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQN---GWL 198
Query: 251 GYAAPEYLATGH---------LTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWA 301
+ APE + + SDV++ G + E L R K +P+ + W
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE-LHAREWPFKTQPA---EAIIWQ 254
Query: 302 -----KPYLASKRKIFRIIDNRLEGQYTLEGAYKAATLALRCLSTEGKFRPMMAEVVTVL 356
KP L+ + + + + L C + E + RP +++ +L
Sbjct: 255 MGTGMKPNLSQ-----------------IGMGKEISDILLFCWAFEQEERPTFTKLMDML 297
Query: 357 EQL 359
E+L
Sbjct: 298 EKL 300
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 135 LYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKG 194
L HPN+V+ L H +V E+ G L + G + + + ++ G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----ISG 127
Query: 195 VAFLHGAETKVIYRDFKTSNILLDTN--YNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGY 252
V++ H +V +RD K N LLD + K+ FG +K Q +GT Y
Sbjct: 128 VSYCHA--MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKDTVGTPAY 182
Query: 253 AAPEYLATGHLTAK-SDVYSFGVVLLEMLSG 282
APE L K +DV+S GV L ML G
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 38/223 (17%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGF-QGHKEWLAEVNYLGQLYH 137
+LG+G +VF+G TG + A+K N F + + E L +L H
Sbjct: 16 ILGQGATANVFRG---------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66
Query: 138 PNLVKLVGYCLEDD----HRLLVYEFMPRGSLENHLFR-RGSYFQPLS-WNLRLKVALGA 191
N+VKL + +E++ H++L+ EF P GSL L +Y P S + + L+ +G
Sbjct: 67 KNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILL----DTNYNAKLSDFGLAKDGPTGDQSHVSTRVM 247
H E +++R+ K NI+ D KL+DFG A++ +Q +
Sbjct: 125 MN-----HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVXLY 176
Query: 248 GTYGYAAPEYLATGHLT--------AKSDVYSFGVVLLEMLSG 282
GT Y P+ L A D++S GV +G
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 128 EVNYLGQLY-HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L Q H N+++L+ + E+D LV+E M GS+ +H+ +R +F L ++
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR-RHFNELEASV--- 115
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKD-GPTGDQSHV 242
V A + FLH + +RD K NIL + K+ DFGL GD S +
Sbjct: 116 VVQDVASALDFLHN--KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPI 173
Query: 243 STRVM----GTYGYAAPEYLATGHLTA-----KSDVYSFGVVLLEMLSG 282
ST + G+ Y APE + A + D++S GV+L +LSG
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 139 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 131 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEML------SGRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 139 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 137 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 191
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 232
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 131 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 132 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEML------SGRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 132 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEML------SGRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 68/153 (44%), Gaps = 20/153 (13%)
Query: 141 VKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLH 199
+ + Y +DD+ L LV ++ G L L + L + A V LH
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 200 GAETKVIYRDFKTSNILLDTNYNAKLSDFG----LAKDGPTGDQSHVSTRVMGTYGYAAP 255
++RD K NIL+D N + +L+DFG L +DG QS V+ +GT Y +P
Sbjct: 196 -----YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV--QSSVA---VGTPDYISP 245
Query: 256 EYLAT-----GHLTAKSDVYSFGVVLLEMLSGR 283
E L G + D +S GV + EML G
Sbjct: 246 EILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 101/240 (42%), Gaps = 33/240 (13%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEW---LAE 128
++F+ S LG G +G VFK E G + AVKR + F+G K+ LAE
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKE---------DGRLYAVKR-SMSPFRGPKDRARKLAE 106
Query: 129 V---NYLGQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRL 185
V +GQ HP V+L E+ L + + SL+ H G+ L
Sbjct: 107 VGSHEKVGQ--HPCCVRLE-QAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYL 163
Query: 186 KVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTR 245
+ L +A H +++ D K +NI L KL DFGL + T V
Sbjct: 164 RDTL-----LALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE- 217
Query: 246 VMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYL 305
G Y APE L + TA +DV+S G+ +LE+ A + P G + + YL
Sbjct: 218 --GDPRYMAPELLQGSYGTA-ADVFSLGLTILEV-----ACNMELPHGGEGWQQLRQGYL 269
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 143 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 197
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 238
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 176 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEML------SGRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 176 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEML------SGRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 132 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 227
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-----KEWLAEVNYLG 133
V+G+G F SV + I+ TG AVK ++ F ++ E +
Sbjct: 33 VIGKGPF-SVVRRCINRE--------TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 83
Query: 134 QLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
L HP++V+L+ D +V+EFM L + +R S + +
Sbjct: 84 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 143
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNA---KLSDFGLAKDGPTGDQSHVSTRVMGTY 250
+ + H + +I+RD K +LL + N+ KL FG+A G+ V+ +GT
Sbjct: 144 ALRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTP 199
Query: 251 GYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ APE + DV+ GV+L +LSG
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 136 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYR 190
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
APE + D++S G ++ E++ G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 33/220 (15%)
Query: 79 VLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY-H 137
+LGEG + V A G AVK + + EV L Q +
Sbjct: 20 LLGEGAYAKVQ---------GAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 138 PNLVKLVGYCLEDDHRL-LVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
N+++L+ + EDD R LV+E + GS+ H+ ++ + + + +V A +
Sbjct: 71 KNILELIEF-FEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREA----SRVVRDVAAALD 125
Query: 197 FLHGAETK-VIYRDFKTSNILLDTNYNA---KLSDFGLA-----KDGPTGDQSHVSTRVM 247
FLH TK + +RD K NIL ++ K+ DF L + T + T
Sbjct: 126 FLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 248 GTYGYAAPEYLA--TGHLT---AKSDVYSFGVVLLEMLSG 282
G+ Y APE + T T + D++S GVVL MLSG
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 21/213 (9%)
Query: 78 SVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGH-----KEWLAEVNYL 132
V+G+G F SV + I+ TG AVK ++ F ++ E +
Sbjct: 30 EVIGKGPF-SVVRRCINRE--------TGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 133 GQLYHPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAA 192
L HP++V+L+ D +V+EFM L + +R S +
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 193 KGVAFLHGAETKVIYRDFKTSNILLDTNYNA---KLSDFGLAKDGPTGDQSHVSTRVMGT 249
+ + + H + +I+RD K +LL + N+ KL FG+A G+ V+ +GT
Sbjct: 141 EALRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGT 196
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ APE + DV+ GV+L +LSG
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 92/228 (40%), Gaps = 44/228 (19%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQL--YH 137
LGEG FG V + ID H +V V R + +E+ L L
Sbjct: 22 LGEGAFGKVVEC-ID-HKAGGRHVAVKIVKNVDRYCEAA-------RSEIQVLEHLNTTD 72
Query: 138 PN----LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
PN V+++ + H +V+E + L + F + + F P + K+A K
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELL---GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 194 GVAFLHGAETKVIYRDFKTSNIL-LDTNY------------------NAKLSDFGLAKDG 234
V FLH K+ + D K NIL + ++Y + K+ DFG A
Sbjct: 130 SVNFLHS--NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--- 184
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
T D H ST V T Y APE + + DV+S G +L+E G
Sbjct: 185 -TYDDEHHSTLV-STRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL----NQDGFQGHKEWLAEVNYLGQL 135
+G+G FG VFK A TG +A+K++ ++GF L E+ L L
Sbjct: 26 IGQGTFGEVFK---------ARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 74
Query: 136 YHPNLVKLVGYCLEDDHRL--------LVYEFMPR---GSLENHLFRRGSYFQPLSWNLR 184
H N+V L+ C LV++F G L N L + + +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-------FTLSEI 127
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH--- 241
+V G+ ++H K+++RD K +N+L+ + KL+DFGLA+ S
Sbjct: 128 KRVMQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 242 VSTRVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEM 279
RV+ T Y PE L D++ G ++ EM
Sbjct: 186 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
++ +G G +G V A + GT + A K++ + + + E+ + L
Sbjct: 14 ENTIGRGSWGEVK---------IAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
HPN+++L ++ LV E G LF R + + + ++ VA
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLSAVA 120
Query: 197 FLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
+ H + V +RD K N L T + KL DFGLA G + T+V GT Y
Sbjct: 121 YCH--KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKV-GTPYYV 175
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+P+ L G + D +S GV++ +L G
Sbjct: 176 SPQVLE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 77 DSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLY 136
++ +G G +G V A + GT + A K++ + + + E+ + L
Sbjct: 31 ENTIGRGSWGEVK---------IAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVA 196
HPN+++L ++ LV E G LF R + + + ++ VA
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLSAVA 137
Query: 197 FLHGAETKVIYRDFKTSNILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
+ H + V +RD K N L T + KL DFGLA G + T+V GT Y
Sbjct: 138 YCH--KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKV-GTPYYV 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+P+ L G + D +S GV++ +L G
Sbjct: 193 SPQVLE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 101/247 (40%), Gaps = 53/247 (21%)
Query: 73 NFRPDSVLGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQ--DGFQGHKEWLAEVN 130
N+ ++G G +G V+ A +A+K++N+ + K L E+
Sbjct: 29 NYEIKHLIGRGSYGYVY---------LAYDKNANKNVAIKKVNRMFEDLIDCKRILREIT 79
Query: 131 YLGQLYHPNLVKLVGYCL-ED----DHRLLVYEFMP---RGSLENHLFRRGSYFQPLSWN 182
L +L +++L + ED D +V E + + +F + + + +N
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYN 139
Query: 183 LRLKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHV 242
L L G F+H E+ +I+RD K +N LL+ + + K+ DFGLA+ + H+
Sbjct: 140 LLL--------GEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHI 189
Query: 243 S-----------------------TRVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLE 278
T + T Y APE L + T D++S G + E
Sbjct: 190 VNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAE 249
Query: 279 MLSGRRA 285
+L+ ++
Sbjct: 250 LLNMMKS 256
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 79 VLGEGGFGSVFKGWIDE-HSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYH 137
V+G+G FG V K + + H A K MV KR H++ E+ L L
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALK----MVRNEKRF-------HRQAAEEIRILEHLRK 152
Query: 138 P------NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
N++ ++ +H + +E + S+ + + + FQ S L K A
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNA--KLSDFGLAKDGPTGDQSHVSTRVMGT 249
+ + LH + ++I+ D K NILL + K+ DFG + + V T +
Sbjct: 210 LQCLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXIQSR 263
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ Y APE + D++S G +L E+L+G
Sbjct: 264 F-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL----NQDGFQGHKEWLAEVNYLGQL 135
+G+G FG VFK A TG +A+K++ ++GF L E+ L L
Sbjct: 26 IGQGTFGEVFK---------ARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 74
Query: 136 YHPNLVKLVGYCLEDDHRL--------LVYEFMPR---GSLENHLFRRGSYFQPLSWNLR 184
H N+V L+ C LV++F G L N L + + +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-------FTLSEI 127
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH--- 241
+V G+ ++H K+++RD K +N+L+ + KL+DFGLA+ S
Sbjct: 128 KRVMQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 242 VSTRVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEM 279
RV+ T Y PE L D++ G ++ EM
Sbjct: 186 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL----NQDGFQGHKEWLAEVNYLGQL 135
+G+G FG VFK A TG +A+K++ ++GF L E+ L L
Sbjct: 25 IGQGTFGEVFK---------ARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 73
Query: 136 YHPNLVKLVGYCLEDDHRL--------LVYEFMPR---GSLENHLFRRGSYFQPLSWNLR 184
H N+V L+ C LV++F G L N L + + +
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-------FTLSEI 126
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH--- 241
+V G+ ++H K+++RD K +N+L+ + KL+DFGLA+ S
Sbjct: 127 KRVMQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184
Query: 242 VSTRVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEM 279
RV+ T Y PE L D++ G ++ EM
Sbjct: 185 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRL----NQDGFQGHKEWLAEVNYLGQL 135
+G+G FG VFK A TG +A+K++ ++GF L E+ L L
Sbjct: 26 IGQGTFGEVFK---------ARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 74
Query: 136 YHPNLVKLVGYCLEDDHRL--------LVYEFMPR---GSLENHLFRRGSYFQPLSWNLR 184
H N+V L+ C LV++F G L N L + + +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-------FTLSEI 127
Query: 185 LKVALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSH--- 241
+V G+ ++H K+++RD K +N+L+ + KL+DFGLA+ S
Sbjct: 128 KRVMQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 242 VSTRVMGTYGYAAPE-YLATGHLTAKSDVYSFGVVLLEM 279
RV+ T Y PE L D++ G ++ EM
Sbjct: 186 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 194 GVAFLHGAETKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYA 253
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ G + V+ Y Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YR 192
Query: 254 APEYLATGHLTAKSDVYSFGVVLLEMLS------GRRAVDK 288
APE + D++S G ++ EM+ GR +D+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 79 VLGEGGFGSVFKGWIDE-HSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLYH 137
V+G+G FG V K + + H A K MV KR H++ E+ L L
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALK----MVRNEKRF-------HRQAAEEIRILEHLRK 152
Query: 138 P------NLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGA 191
N++ ++ +H + +E + S+ + + + FQ S L K A
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 192 AKGVAFLHGAETKVIYRDFKTSNILLDTNYNA--KLSDFGLAKDGPTGDQSHVSTRVMGT 249
+ + LH + ++I+ D K NILL + K+ DFG + V T +
Sbjct: 210 LQCLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRVYTXIQSR 263
Query: 250 YGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
+ Y APE + D++S G +L E+L+G
Sbjct: 264 F-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 92/228 (40%), Gaps = 44/228 (19%)
Query: 80 LGEGGFGSVFKGWIDEHSFAATKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQL--YH 137
LGEG FG V + ID H +V V R + +E+ L L
Sbjct: 22 LGEGAFGKVVEC-ID-HKAGGRHVAVKIVKNVDRYCEAA-------RSEIQVLEHLNTTD 72
Query: 138 PN----LVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAK 193
PN V+++ + H +V+E + L + F + + F P + K+A K
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELL---GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 194 GVAFLHGAETKVIYRDFKTSNIL-LDTNY------------------NAKLSDFGLAKDG 234
V FLH K+ + D K NIL + ++Y + K+ DFG A
Sbjct: 130 SVNFLHS--NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--- 184
Query: 235 PTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSG 282
T D H ST V + Y APE + + DV+S G +L+E G
Sbjct: 185 -TYDDEHHSTLVXXRH-YRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 128 EVNYLGQLY-HPNLVKLVGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLK 186
EV L Q H N+++L+ + E+D LV+E M GS+ +H+ +R +F L ++
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR-RHFNELEASV--- 115
Query: 187 VALGAAKGVAFLHGAETKVIYRDFKTSNILLDTNYN---AKLSDFGLAKD-GPTGDQSHV 242
V A + FLH + +RD K NIL + K+ DF L GD S +
Sbjct: 116 VVQDVASALDFLHN--KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI 173
Query: 243 STRVM----GTYGYAAPEYLATGHLTA-----KSDVYSFGVVLLEMLSG 282
ST + G+ Y APE + A + D++S GV+L +LSG
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTS 213
L+V E + G L + + RG Q + ++ + + +LH + +RD K
Sbjct: 95 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHS--INIAHRDVKPE 150
Query: 214 NILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVY 270
N+L + N KL+DFG AK+ T + ++T Y Y APE L D++
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 207
Query: 271 SFGVVLLEMLSG 282
S GV++ +L G
Sbjct: 208 SLGVIMYILLCG 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTS 213
L+V E + G L + + RG Q + ++ + + +LH + +RD K
Sbjct: 97 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHS--INIAHRDVKPE 152
Query: 214 NILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVY 270
N+L + N KL+DFG AK+ T + ++T Y Y APE L D++
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 209
Query: 271 SFGVVLLEMLSG 282
S GV++ +L G
Sbjct: 210 SLGVIMYILLCG 221
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAAKGVAFLHGAETKVIYRDFKTS 213
L+V E + G L + + RG Q + ++ + + +LH + +RD K
Sbjct: 105 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHS--INIAHRDVKPE 160
Query: 214 NILLDT---NYNAKLSDFGLAKDGPTGDQSHVSTRVMGTYGYAAPEYLATGHLTAKSDVY 270
N+L + N KL+DFG AK+ T + ++T Y Y APE L D++
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 217
Query: 271 SFGVVLLEMLSG 282
S GV++ +L G
Sbjct: 218 SLGVIMYILLCG 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,955,637
Number of Sequences: 62578
Number of extensions: 503187
Number of successful extensions: 3836
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 1249
Number of HSP's gapped (non-prelim): 1069
length of query: 404
length of database: 14,973,337
effective HSP length: 101
effective length of query: 303
effective length of database: 8,652,959
effective search space: 2621846577
effective search space used: 2621846577
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)