Your job contains 1 sequence.
>046898
MEEDASSMVSNAKTNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHW
GAQIYANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTDTNNQEPNFQNQYST
EAVLNMIRDGTYQPKFADYLRVQSQREDNNSNASLNQIMVHGDEQFAYRQLFQKELTPSD
VGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMRPWKFRYCFWRSSQ
SYVFTRGWNRFVKEKKLKEKDIITFYACECANGAKEGQNFFLVDVIHCEGQNCNVVKKPV
QLEQITGKIFSYNEKESNSEEKGFKLFGVQIN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046898
(332 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026058 - symbol:AT1G51120 species:3702 "Arabi... 853 3.0e-85 1
TAIR|locus:2015832 - symbol:AT1G50680 species:3702 "Arabi... 834 3.1e-83 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 473 5.6e-45 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 465 3.9e-44 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 461 1.0e-43 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 460 1.3e-43 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 271 1.4e-23 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 267 3.8e-23 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 266 4.8e-23 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 264 7.8e-23 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 262 1.3e-22 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 256 5.5e-22 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 254 9.0e-22 1
TAIR|locus:2154272 - symbol:CRF3 "AT5G53290" species:3702... 164 1.2e-09 1
TAIR|locus:2061956 - symbol:ERF71 "ethylene response fact... 141 3.3e-09 1
TAIR|locus:2018635 - symbol:RAP2.6 "related to AP2 6" spe... 139 1.6e-08 1
TAIR|locus:505006142 - symbol:CRF7 "AT1G22985" species:37... 134 2.0e-08 1
TAIR|locus:2058764 - symbol:ERF38 "ERF family protein 38"... 139 2.7e-08 1
TAIR|locus:2129111 - symbol:AT4G16750 species:3702 "Arabi... 132 3.3e-08 1
TAIR|locus:2183304 - symbol:AT5G07310 species:3702 "Arabi... 147 4.5e-08 1
TAIR|locus:2171840 - symbol:AT5G65130 species:3702 "Arabi... 145 4.6e-08 2
TAIR|locus:2015061 - symbol:AT1G22190 species:3702 "Arabi... 146 5.8e-08 1
TAIR|locus:2051359 - symbol:ERF53 "ERF domain 53" species... 147 9.7e-08 1
TAIR|locus:2010529 - symbol:AT1G28160 species:3702 "Arabi... 143 1.0e-07 1
TAIR|locus:2135282 - symbol:AT4G39780 species:3702 "Arabi... 142 2.0e-07 1
TAIR|locus:2076621 - symbol:AT3G57600 species:3702 "Arabi... 142 2.1e-07 1
TAIR|locus:2132962 - symbol:CRF4 "AT4G27950" species:3702... 143 2.8e-07 1
TAIR|locus:2037698 - symbol:SHN1 "SHINE 1" species:3702 "... 134 3.3e-07 1
TAIR|locus:2005704 - symbol:AT1G75490 species:3702 "Arabi... 135 3.5e-07 1
TAIR|locus:2183174 - symbol:RAP2.11 "related to AP2 11" s... 139 3.5e-07 1
TAIR|locus:2027171 - symbol:ORA47 species:3702 "Arabidops... 133 3.5e-07 1
TAIR|locus:2034295 - symbol:AT1G36060 species:3702 "Arabi... 141 4.0e-07 1
TAIR|locus:2032500 - symbol:ERF11 "ERF domain protein 11"... 121 5.2e-07 1
TAIR|locus:2089368 - symbol:EBP "ethylene-responsive elem... 137 5.7e-07 1
TAIR|locus:2008021 - symbol:ERF3 "ethylene responsive ele... 135 6.4e-07 1
TAIR|locus:2119555 - symbol:AT4G13620 species:3702 "Arabi... 141 6.5e-07 1
TAIR|locus:2182993 - symbol:PUCHI species:3702 "Arabidops... 140 6.7e-07 1
TAIR|locus:2204730 - symbol:AT1G77640 species:3702 "Arabi... 136 6.9e-07 1
TAIR|locus:2128429 - symbol:CRF2 "AT4G23750" species:3702... 139 8.4e-07 1
TAIR|locus:2136078 - symbol:CRF1 "AT4G11140" species:3702... 137 9.2e-07 1
TAIR|locus:2201103 - symbol:DREB26 "dehydration response ... 134 9.4e-07 1
TAIR|locus:2086203 - symbol:ESE1 "ethylene and salt induc... 117 1.4e-06 1
TAIR|locus:2197076 - symbol:RAP2.12 "related to AP2 12" s... 137 1.6e-06 1
UNIPROTKB|Q7XKC5 - symbol:LOC_Os04g58000 "B3 domain-conta... 138 1.7e-06 1
TAIR|locus:2060385 - symbol:AT2G22200 species:3702 "Arabi... 133 2.0e-06 1
TAIR|locus:1005716457 - symbol:RAP2.9 "related to AP2 9" ... 115 2.4e-06 1
TAIR|locus:2170101 - symbol:ERF110 "ethylene response fa... 129 3.1e-06 1
TAIR|locus:2087065 - symbol:ERF4 "ethylene responsive ele... 129 3.3e-06 1
TAIR|locus:2032170 - symbol:LEC2 "LEAFY COTYLEDON 2" spec... 134 3.5e-06 1
TAIR|locus:2090975 - symbol:RAP2.2 "related to AP2 2" spe... 134 3.9e-06 1
TAIR|locus:2176511 - symbol:AT5G43410 species:3702 "Arabi... 113 3.9e-06 1
TAIR|locus:2086213 - symbol:TDR1 "Transcriptional Regulat... 112 5.1e-06 1
TAIR|locus:2009655 - symbol:ERF8 "ethylene response facto... 123 5.7e-06 1
TAIR|locus:2123708 - symbol:AT4G28140 species:3702 "Arabi... 130 6.2e-06 1
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 135 6.4e-06 1
TAIR|locus:2029491 - symbol:RAP2.4 "related to AP2 4" spe... 131 6.5e-06 1
TAIR|locus:2156171 - symbol:AT5G61890 species:3702 "Arabi... 128 6.6e-06 1
TAIR|locus:2183861 - symbol:Rap2.6L "related to AP2 6l" s... 125 8.0e-06 1
TAIR|locus:2018289 - symbol:ERF14 "Ethylene-responsive el... 109 1.1e-05 1
TAIR|locus:2024249 - symbol:ERF10 "ERF domain protein 10"... 126 1.1e-05 1
UNIPROTKB|Q8VXC3 - symbol:ebp-89 "Ethylene responsive pro... 128 1.4e-05 1
TAIR|locus:2124504 - symbol:AT4G18450 species:3702 "Arabi... 127 1.5e-05 1
TAIR|locus:2148022 - symbol:SHN2 "shine2" species:3702 "A... 120 1.8e-05 1
TAIR|locus:2145477 - symbol:SHN3 "shine3" species:3702 "A... 120 1.8e-05 1
TAIR|locus:2062954 - symbol:CRF5 "AT2G46310" species:3702... 126 1.8e-05 1
TAIR|locus:2167659 - symbol:ERF9 "erf domain protein 9" s... 121 1.8e-05 1
TAIR|locus:2194819 - symbol:AT1G44830 species:3702 "Arabi... 122 1.8e-05 1
TAIR|locus:2005493 - symbol:AP2 "APETALA 2" species:3702 ... 128 2.3e-05 1
TAIR|locus:2151576 - symbol:AT5G61590 species:3702 "Arabi... 120 2.6e-05 1
TAIR|locus:2155598 - symbol:TOE3 "target of early activat... 126 2.7e-05 1
TAIR|locus:2012653 - symbol:AT1G33760 species:3702 "Arabi... 118 2.7e-05 1
TAIR|locus:2026301 - symbol:CRF8 "AT1G71130" species:3702... 113 2.8e-05 1
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 129 3.0e-05 1
TAIR|locus:2176095 - symbol:ABR1 "ABA REPRESSOR1" species... 126 3.3e-05 1
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 127 4.8e-05 1
TAIR|locus:2094897 - symbol:AT3G16280 species:3702 "Arabi... 120 4.9e-05 1
TAIR|locus:2171514 - symbol:ERF2 "ethylene responsive ele... 119 7.0e-05 1
TAIR|locus:2129116 - symbol:ERF-1 "ethylene responsive el... 120 7.1e-05 1
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 125 8.0e-05 1
TAIR|locus:2093166 - symbol:ABI3 "AT3G24650" species:3702... 126 8.2e-05 1
TAIR|locus:2194007 - symbol:ERF73 "ethylene response fact... 119 8.7e-05 1
TAIR|locus:2014185 - symbol:AT1G64380 species:3702 "Arabi... 120 0.00012 1
TAIR|locus:2116224 - symbol:RRTF1 "redox responsive trans... 118 0.00012 1
TAIR|locus:2055002 - symbol:ERF13 "ethylene-responsive el... 116 0.00013 1
UNIPROTKB|Q6Z1Z3 - symbol:IDEF1 "B3 domain-containing pro... 120 0.00013 1
TAIR|locus:2155680 - symbol:AIL7 "AINTEGUMENTA-like 7" sp... 122 0.00014 1
TAIR|locus:2103301 - symbol:AT3G60490 species:3702 "Arabi... 117 0.00014 1
UNIPROTKB|Q5MFV2 - symbol:BIERF2 "BTH-induced ERF transcr... 116 0.00014 1
TAIR|locus:2005490 - symbol:ABI4 "ABA INSENSITIVE 4" spec... 119 0.00014 1
TAIR|locus:2055007 - symbol:AT2G44940 species:3702 "Arabi... 118 0.00015 1
TAIR|locus:2063073 - symbol:DREB2C species:3702 "Arabidop... 118 0.00020 1
TAIR|locus:2074765 - symbol:CEJ1 "cooperatively regulated... 106 0.00021 1
TAIR|locus:2082732 - symbol:SMZ "SCHLAFMUTZE" species:370... 118 0.00021 1
TAIR|locus:2044845 - symbol:HRD "HARDY" species:3702 "Ara... 111 0.00022 1
TAIR|locus:2159068 - symbol:LEP "LEAFY PETIOLE" species:3... 113 0.00022 1
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 122 0.00025 1
UNIPROTKB|Q5MFV1 - symbol:BIERF3 "BTH-induced ERF transcr... 116 0.00027 1
TAIR|locus:2202200 - symbol:AT1G19210 species:3702 "Arabi... 110 0.00029 1
TAIR|locus:2032510 - symbol:ERF12 "ERF domain protein 12"... 110 0.00033 1
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 119 0.00033 1
WARNING: Descriptions of 23 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2026058 [details] [associations]
symbol:AT1G51120 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC079828
HSSP:Q9ZWM9 KO:K09287 HOGENOM:HOG000090522 ProtClustDB:CLSN2682911
EMBL:AY560883 IPI:IPI00548594 PIR:F96548 RefSeq:NP_175524.1
UniGene:At.50656 ProteinModelPortal:Q9C688 SMR:Q9C688 PRIDE:Q9C688
DNASU:841535 EnsemblPlants:AT1G51120.1 GeneID:841535
KEGG:ath:AT1G51120 TAIR:At1g51120 eggNOG:NOG252474
InParanoid:Q9C688 OMA:EEMKTET PhylomeDB:Q9C688
Genevestigator:Q9C688 Uniprot:Q9C688
Length = 352
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 189/348 (54%), Positives = 228/348 (65%)
Query: 9 VSN-AKTNANNTEASDSNNS-TSGLQPAPKRMRHDKNVS-LVKFKGVVPQQNGHWGAQIY 65
+SN AKT + +DS S T ++P +S KFKGVV QQNGHWGAQIY
Sbjct: 4 MSNVAKTTTETSGLTDSVLSLTKRMKPTEVTTTTKPALSNTTKFKGVVQQQNGHWGAQIY 63
Query: 66 ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGD--SHRNFPWTDTNNQEPNFQNQYSTEAV 123
A+H+RIWLGTFKS EAA AYDSA+IK+R D SHRNFPW+D EP+FQ Y+TEAV
Sbjct: 64 ADHRRIWLGTFKSAHEAAAAYDSASIKLRSFDANSHRNFPWSDFTLHEPDFQECYTTEAV 123
Query: 124 LNMIRDGTYQPKFADYLRVQSQREDNNSNASLNQIMVHGD---EQ---FAYRQLFQKELT 177
LNMIRDG+YQ KF D+LR++SQ N + Q++ G+ E F+ QLFQKELT
Sbjct: 124 LNMIRDGSYQHKFRDFLRIRSQIVANINIVGSKQVLGGGEGGQESNKCFSCTQLFQKELT 183
Query: 178 PSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMRPWKFRYCFWR 237
PSDVGKLNRLVIPKKYAVKY PFIS++ E + GV+D+E+VF+D+ MR WKFRYC+WR
Sbjct: 184 PSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQWKFRYCYWR 243
Query: 238 SSQSYVFTRGWNRFVKEKKLKEKDIITFYACECANGAK--EGQN--FFLVDVIHCEGQNC 293
SSQS+VFTRGWN FVKEK LKEKDII FY C+ N K EGQ+ F ++DV H G
Sbjct: 244 SSQSFVFTRGWNGFVKEKNLKEKDIIVFYTCDVPNNVKTLEGQSKTFLMIDVHHFSGNGF 303
Query: 294 NV---VKKPVQL----EQITGKIFSYXXXXXXXXXX---GFKLFGVQI 331
V V K V E T +F+ GF LFGV+I
Sbjct: 304 VVPEEVNKTVHEISDEEMKTETLFTSKVEEETKSEEKKGGFMLFGVRI 351
>TAIR|locus:2015832 [details] [associations]
symbol:AT1G50680 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PRINTS:PR00367
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC079279 HSSP:Q9ZWM9 KO:K09287 EMBL:AY560882
IPI:IPI00527323 PIR:E96543 RefSeq:NP_175483.1 UniGene:At.50579
ProteinModelPortal:Q9C6P5 SMR:Q9C6P5 PaxDb:Q9C6P5 PRIDE:Q9C6P5
EnsemblPlants:AT1G50680.1 GeneID:841490 KEGG:ath:AT1G50680
TAIR:At1g50680 eggNOG:NOG331833 HOGENOM:HOG000090522
InParanoid:Q9C6P5 OMA:GEVNQES PhylomeDB:Q9C6P5
ProtClustDB:CLSN2682911 Genevestigator:Q9C6P5 Uniprot:Q9C6P5
Length = 337
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 173/310 (55%), Positives = 209/310 (67%)
Query: 47 VKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSEREAAMAYDSAAIKIRGGD--SHRNFPW 104
VK+KGVV QQNGHWGAQIYA+H+RIWLGTFKS EAA AYDSA+IK+R D SHRNFPW
Sbjct: 26 VKYKGVVQQQNGHWGAQIYADHKRIWLGTFKSADEAATAYDSASIKLRSFDANSHRNFPW 85
Query: 105 TDTNNQEPNFQNQYSTEAVLNMIRDGTYQPKFADYLRVQSQ--REDN--NSNASLNQIMV 160
+ EP+FQN Y+TE VLNMIRDG+YQ KF D+LR++SQ N + ++
Sbjct: 86 STITLNEPDFQNCYTTETVLNMIRDGSYQHKFRDFLRIRSQIVASINIGGPKQARGEVNQ 145
Query: 161 HGDEQFAYRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENA---INGGVDDM 217
D+ F+ QLFQKELTPSDVGKLNRLVIPKKYAVKY PFIS + E I G V+D+
Sbjct: 146 ESDKCFSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDV 205
Query: 218 ELVFFDKLMRPWKFRYCFWRSSQSYVFTRGWNRFVKEKKLKEKDIITFYACECANGAK-- 275
E+VF+D+ MR WKFRYC+W+SSQS+VFTRGWN FVKEK LKEKD+I FY C+ N K
Sbjct: 206 EVVFYDRAMRQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFYTCDVPNNVKTL 265
Query: 276 EGQ--NFFLVDVIHCEGQNCNVVKKPVQL------------EQITGKIFSYXXXXXXXXX 321
EGQ NF ++DV HC N +VV + V + E + +
Sbjct: 266 EGQRKNFLMIDV-HCFSDNGSVVAEEVSMTVHDSSVQVKKTENLVSSMLEDKETKSEENK 324
Query: 322 XGFKLFGVQI 331
GF LFGV+I
Sbjct: 325 GGFMLFGVRI 334
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 105/218 (48%), Positives = 134/218 (61%)
Query: 48 KFKGVVPQQNGHWGAQIYANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTDT 107
+FKGVVPQ NG WGAQIY HQR+WLGTF E EAA AYD AA + RG D+ NF T T
Sbjct: 61 RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDT-T 119
Query: 108 NNQEPNFQNQYSTEAVLNMIRDGTYQPKFADYLRVQSQREDNNSNASLNQIMVHGDEQFA 167
+E F N +S +++M+R TY+ + R + + +L ++V + A
Sbjct: 120 FEEEVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTGFKTA 179
Query: 168 YRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMR 227
LF+K +TPSDVGKLNRLVIPK A K+FP G N N V M L F D +
Sbjct: 180 -ELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPL---PLGNN--NVSVKGMLLNFEDVNGK 233
Query: 228 PWKFRYCFWRSSQSYVFTRGWNRFVKEKKLKEKDIITF 265
W+FRY +W SSQSYV T+GW+RFVKEK+L D+I+F
Sbjct: 234 VWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISF 271
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 97/223 (43%), Positives = 135/223 (60%)
Query: 48 KFKGVVPQQNGHWGAQIYANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP-WTD 106
K+KGVVPQ NG WGAQIY HQR+WLGTF E EAA +YD A + RG D+ NF D
Sbjct: 71 KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRDAVTNFKSQVD 130
Query: 107 TNNQEPNFQNQYSTEAVLNMIRDGTYQPKFADYLRVQSQREDNNSNASLN--QIMVHGDE 164
N+ E F + +S +++M+R TY +F QS+R+ N + + + +G++
Sbjct: 131 GNDAESAFLDAHSKAEIVDMLRKHTYADEFE-----QSRRKFVNGDGKRSGLETATYGND 185
Query: 165 QF--AYRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFF 222
A LF+K +TPSDVGKLNRLVIPK++A K+FP + + +
Sbjct: 186 AVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLE 245
Query: 223 DKLMRPWKFRYCFWRSSQSYVFTRGWNRFVKEKKLKEKDIITF 265
D+ + W+FRY +W SSQSYV T+GW+RFVKEK L+ D++ F
Sbjct: 246 DRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCF 288
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 101/227 (44%), Positives = 136/227 (59%)
Query: 48 KFKGVVPQQNGHWGAQIYANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTDT 107
K+KGVVPQ NG WGAQIY HQR+WLGTF E EAA AYD A + R D+ NF
Sbjct: 61 KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVKM 120
Query: 108 NNQEPNFQNQYSTEAVLNMIRDGTYQPKFADYLRVQSQREDNNSNASLNQIMV------H 161
+ E +F N +S +++M+R TY + QS+R N N ++ + ++
Sbjct: 121 DEDEVDFLNSHSKSEIVDMLRKHTYNEELE-----QSKRR-RNGNGNMTRTLLTSGLSND 174
Query: 162 GDEQFAYRQ---LFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDME 218
G +R LF+K +TPSDVGKLNRLVIPK +A K+FP S N ++ G +
Sbjct: 175 GVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNV---SVKGVL---- 227
Query: 219 LVFFDKLMRPWKFRYCFWRSSQSYVFTRGWNRFVKEKKLKEKDIITF 265
L F D + W+FRY +W SSQSYV T+GW+RFVKEK L+ D+++F
Sbjct: 228 LNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSF 274
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 105/248 (42%), Positives = 146/248 (58%)
Query: 24 SNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSEREAA 83
S S+ L P + + K+KGVVPQ NG WGAQIY HQR+WLGTF + EAA
Sbjct: 40 SGGSSVVLDPENGLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAA 99
Query: 84 MAYDSAAIKIRGGDSHRNFPWTDTNNQEPNFQNQYSTEAVLNMIRDGTYQPKFADYLRVQ 143
+YD AA + RG D+ NF + + F +S +++M+R TY AD L
Sbjct: 100 RSYDIAACRFRGRDAVVNFK-NVLEDGDLAFLEAHSKAEIVDMLRKHTY----ADELEQN 154
Query: 144 SQRE---DNNSNASLN-QIMVHGDEQFAYRQ-LFQKELTPSDVGKLNRLVIPKKYAVKYF 198
++R+ ++N N D+ R+ LF+K +TPSDVGKLNRLVIPK++A K+F
Sbjct: 155 NKRQLFLSVDANGKRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHF 214
Query: 199 PFISENAGENAINGGVDDMELVFFDKLM-RPWKFRYCFWRSSQSYVFTRGWNRFVKEKKL 257
P S + A+ GV L+ F+ + + W+FRY +W SSQSYV T+GW+RFVKEK L
Sbjct: 215 PLPSPSP---AVTKGV----LINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL 267
Query: 258 KEKDIITF 265
+ D++TF
Sbjct: 268 RAGDVVTF 275
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 52/96 (54%), Positives = 70/96 (72%)
Query: 171 LFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMRPWK 230
LF+K LTPSDVGKLNRLVIPK++A +YFP + A +A+ G + L F D+ +PW+
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAA--AAADAVEKG---LLLCFEDEEGKPWR 91
Query: 231 FRYCFWRSSQSYVFTRGWNRFVKEKKLKEKDIITFY 266
FRY +W SSQSYV T+GW+R+VKEK L D++ F+
Sbjct: 92 FRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFH 127
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 53/100 (53%), Positives = 69/100 (69%)
Query: 171 LFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMRPWK 230
+F K +TPSDVGKLNRLVIPK++A +YFP +N+ N N G + L F D+ W+
Sbjct: 22 MFDKVVTPSDVGKLNRLVIPKQHAERYFPL--DNSTTNDSNKG---LLLNFEDRSGNSWR 76
Query: 231 FRYCFWRSSQSYVFTRGWNRFVKEKKLKEKDIITFYACEC 270
FRY +W SSQSYV T+GW+RFVK+KKL DI++F C
Sbjct: 77 FRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSC 116
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 60/117 (51%), Positives = 78/117 (66%)
Query: 149 NNSNASLNQIMVHGDEQFAYRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGEN 208
NN+N L +M+ E+ +F K +TPSDVGKLNRLVIPK++A +YFP S N N
Sbjct: 38 NNNN--LPMMMIPPPEK---EHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSN---N 89
Query: 209 AINGGVDDMELVFFDKLMRPWKFRYCFWRSSQSYVFTRGWNRFVKEKKLKEKDIITF 265
NG + L F D+ + W+FRY +W SSQSYV T+GW+RFVKEKKL DI++F
Sbjct: 90 Q-NGTL----LNFQDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSF 141
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 55/125 (44%), Positives = 76/125 (60%)
Query: 143 QSQREDNNSNASLNQIMVHGDEQFAYRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPFIS 202
Q + + S + +H D + LF+K LTPSDVGKLNRLVIPK++A KYFP +
Sbjct: 20 QHRHTTDTSETTTTATWLHDDLK---ESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNA 76
Query: 203 ENAGENAINGGVDD--MELVFFDKLMRPWKFRYCFWRSSQSYVFTRGWNRFVKEKKLKEK 260
A + + M L F D+ + W+FRY +W SSQSYV T+GW+RFVK+K+L
Sbjct: 77 VLVSSAAADTSSSEKGMLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPG 136
Query: 261 DIITF 265
D++ F
Sbjct: 137 DVVFF 141
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 59/112 (52%), Positives = 73/112 (65%)
Query: 163 DEQFAYRQ-LFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDD----- 216
D A R+ LF+K LTPSDVGKLNRLVIPK++A KYFP + N N NGG D
Sbjct: 19 DVAIAQRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNN---N--NGGSGDDVATT 73
Query: 217 ---MELVFFDKLMRPWKFRYCFWRSSQSYVFTRGWNRFVKEKKLKEKDIITF 265
M L F D+ + WKFRY +W SSQSYV T+GW+R+VK+K L D++ F
Sbjct: 74 EKGMLLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFF 125
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 54/96 (56%), Positives = 67/96 (69%)
Query: 171 LFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMRPWK 230
+F K LTPSDVGKLNRLVIPK++A +FP + +N NG V D F DK + W+
Sbjct: 35 MFDKVLTPSDVGKLNRLVIPKQHAENFFP-LEDNQ-----NGTVLD----FQDKNGKMWR 84
Query: 231 FRYCFWRSSQSYVFTRGWNRFVKEKKLKEKDIITFY 266
FRY +W SSQSYV T+GW+RFVKEKKL D ++FY
Sbjct: 85 FRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFY 120
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 52/108 (48%), Positives = 72/108 (66%)
Query: 162 GDEQFAYRQ-LFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELV 220
G + A R+ +F K +TPSDVGKLNRLVIPK++A ++FP + ++ E + L
Sbjct: 24 GAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLL-------LN 75
Query: 221 FFDKLMRPWKFRYCFWRSSQSYVFTRGWNRFVKEKKLKEKDIITFYAC 268
F D + W+FRY +W SSQSYV T+GW+RFVK+KKL DI++F C
Sbjct: 76 FEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRC 123
>TAIR|locus:2154272 [details] [associations]
symbol:CRF3 "AT5G53290" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=IDA] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048825 "cotyledon development" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0006606 "protein import into
nucleus" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0048366 EMBL:AB013388 GO:GO:0048825 GO:GO:0042991
HOGENOM:HOG000237664 EMBL:AY560878 EMBL:BT020244 EMBL:BT021136
IPI:IPI00543130 RefSeq:NP_200141.1 UniGene:At.49792
ProteinModelPortal:Q9FK12 SMR:Q9FK12 IntAct:Q9FK12 PRIDE:Q9FK12
EnsemblPlants:AT5G53290.1 GeneID:835410 KEGG:ath:AT5G53290
TAIR:At5g53290 eggNOG:NOG331684 InParanoid:Q9FK12 OMA:NEITVEP
PhylomeDB:Q9FK12 ProtClustDB:CLSN2686526 Genevestigator:Q9FK12
Uniprot:Q9FK12
Length = 354
Score = 164 (62.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 43/121 (35%), Positives = 65/121 (53%)
Query: 1 MEEDASSMVSNAKTNANNTEASDSNNSTSGLQPAPKRMRHDKNVS----LVKFKGVVPQQ 56
+E +++V+ +S S+ + S PA R R + VS + KF+GV +
Sbjct: 76 VEPSCNNVVTGVSMKDRKRLSSSSDETQS---PASSRQRPNNKVSVSGQIKKFRGVRQRP 132
Query: 57 NGHWGAQIYANHQR--IWLGTFKSEREAAMAYDSAAIKIRGGDSHRNF---PWTDTNNQE 111
G W A+I QR IWLGTF++ EAA+ YD+AAI++RG D+ NF P + +E
Sbjct: 133 WGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIPPQEEEEEEE 192
Query: 112 P 112
P
Sbjct: 193 P 193
>TAIR|locus:2061956 [details] [associations]
symbol:ERF71 "ethylene response factor 71" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0034059 "response to anoxia"
evidence=IGI] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC002535 GO:GO:0034059 HOGENOM:HOG000237624
EMBL:AY074645 IPI:IPI00523940 PIR:T00432 RefSeq:NP_182274.1
UniGene:At.37019 ProteinModelPortal:O22259 SMR:O22259
EnsemblPlants:AT2G47520.1 GeneID:819365 KEGG:ath:AT2G47520
TAIR:At2g47520 eggNOG:NOG247457 InParanoid:O22259 OMA:MALEDYM
PhylomeDB:O22259 ProtClustDB:CLSN2913160 Genevestigator:O22259
Uniprot:O22259
Length = 171
Score = 141 (54.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 40/122 (32%), Positives = 61/122 (50%)
Query: 49 FKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTD 106
++G+ + G W A+I + R+WLGTFK+ EAA AYD AAIKIRG + NFP T
Sbjct: 50 YRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQ 109
Query: 107 TNNQ---EPNF-QNQYSTEAVLNMIRDGTYQPKFADYLRV-QSQREDNNSNASLNQIMVH 161
+ +P QN+ +E + + + DY+R Q D+ S + + +
Sbjct: 110 VEEEADTKPGGNQNELISENQVESLSEDLMA--LEDYMRFYQIPVADDQSATDIGNLWSY 167
Query: 162 GD 163
D
Sbjct: 168 QD 169
>TAIR|locus:2018635 [details] [associations]
symbol:RAP2.6 "related to AP2 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009611
"response to wounding" evidence=IEP;RCA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0009409 "response to cold"
evidence=IEP] [GO:0009651 "response to salt stress"
evidence=IEP;IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP;RCA] [GO:0034605 "cellular response to heat"
evidence=IEP] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0009620 "response to fungus" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0045893
GO:GO:0034605 GO:GO:0009753 GO:GO:0009611 GO:GO:0009873
GO:GO:0003677 GO:GO:0009651 GO:GO:0009409 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 GO:GO:0009658 GO:GO:0009751 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC005687
EMBL:AY062847 EMBL:AY114582 EMBL:AF003099 IPI:IPI00532143
PIR:D96498 RefSeq:NP_175008.1 UniGene:At.10778
ProteinModelPortal:Q7G1L2 SMR:Q7G1L2 EnsemblPlants:AT1G43160.1
GeneID:840915 KEGG:ath:AT1G43160 TAIR:At1g43160 InParanoid:Q7G1L2
PhylomeDB:Q7G1L2 Genevestigator:Q7G1L2 Uniprot:Q7G1L2
Length = 192
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 38/105 (36%), Positives = 55/105 (52%)
Query: 48 KFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP-- 103
K++GV + G W A+I H+ R+WLGTF++ AA AYD+AA++ RG + NFP
Sbjct: 60 KYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPEN 119
Query: 104 -WTDTNNQEPNFQNQYSTEAVLNMIRDGTYQPKFADYLRVQSQRE 147
T T + +F Q S + L I D P Y R Q++
Sbjct: 120 VGTQTIQRNSHFL-QNSMQPSLTYI-DQC--PTLLSYSRCMEQQQ 160
>TAIR|locus:505006142 [details] [associations]
symbol:CRF7 "AT1G22985" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AF000657 EMBL:AY062541 EMBL:AY093336 EMBL:AY087064
IPI:IPI00540393 RefSeq:NP_564186.1 UniGene:At.27304
ProteinModelPortal:Q8W4I5 SMR:Q8W4I5 IntAct:Q8W4I5
EnsemblPlants:AT1G22985.1 GeneID:838906 KEGG:ath:AT1G22985
TAIR:At1g22985 eggNOG:NOG242741 HOGENOM:HOG000112390
InParanoid:Q8W4I5 OMA:SDPPEVG PhylomeDB:Q8W4I5
ProtClustDB:CLSN2687921 Genevestigator:Q8W4I5 Uniprot:Q8W4I5
Length = 159
Score = 134 (52.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 33 PAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQIYANH-----QRIWLGTFKSEREAAMAYD 87
PA + + KF+GV + G W A+I +RIWLGTF++ EAA+AYD
Sbjct: 59 PASLLAARNTTANKKKFRGVRQRPWGKWAAEIRCGRVKGRPERIWLGTFETAEEAALAYD 118
Query: 88 SAAIKIRGGDSHRNFPWTDTNN 109
+AAI++ G D+ NF D ++
Sbjct: 119 NAAIQLIGPDAPTNFGRPDVDS 140
>TAIR|locus:2058764 [details] [associations]
symbol:ERF38 "ERF family protein 38" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0009834 "secondary cell wall
biogenesis" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006068 GO:GO:0009834
HOGENOM:HOG000237624 EMBL:AY560845 EMBL:DQ446600 EMBL:DQ653042
EMBL:BT025754 IPI:IPI00524895 PIR:H84771 RefSeq:NP_181113.1
UniGene:At.50671 ProteinModelPortal:Q9ZQP3 SMR:Q9ZQP3
EnsemblPlants:AT2G35700.1 GeneID:818139 KEGG:ath:AT2G35700
TAIR:At2g35700 eggNOG:NOG276561 InParanoid:Q9ZQP3 OMA:MDVETSS
PhylomeDB:Q9ZQP3 ProtClustDB:CLSN2683800 Genevestigator:Q9ZQP3
Uniprot:Q9ZQP3
Length = 194
Score = 139 (54.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 32 QPAPKRMRHDKNVSLVK----FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMA 85
+P KR + D + +V F+GV +Q G W ++I RIWLGTF + AA A
Sbjct: 24 KPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARA 83
Query: 86 YDSAAIKIRGGDSHRNFP 103
+D AA+ I+GG +H NFP
Sbjct: 84 HDVAALAIKGGSAHLNFP 101
>TAIR|locus:2129111 [details] [associations]
symbol:AT4G16750 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:Z97341 EMBL:AL161544 HOGENOM:HOG000237624
ProtClustDB:CLSN2683800 EMBL:AY560874 EMBL:BT011576 EMBL:BT020592
IPI:IPI00533818 PIR:F85186 RefSeq:NP_193408.1 UniGene:At.33050
ProteinModelPortal:Q9SUK8 SMR:Q9SUK8 EnsemblPlants:AT4G16750.1
GeneID:827379 KEGG:ath:AT4G16750 TAIR:At4g16750 eggNOG:NOG310275
InParanoid:Q9SUK8 OMA:MQDSSSH PhylomeDB:Q9SUK8
Genevestigator:Q9SUK8 Uniprot:Q9SUK8
Length = 179
Score = 132 (51.5 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 31/71 (43%), Positives = 41/71 (57%)
Query: 36 KRMRHDKNVSLV-KFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEREAAMAYDSAAIK 92
K K VS F+GV +Q G W ++I + RIWLGTF + AA A+D AA+
Sbjct: 26 KTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALA 85
Query: 93 IRGGDSHRNFP 103
I+GG +H NFP
Sbjct: 86 IKGGSAHLNFP 96
>TAIR|locus:2183304 [details] [associations]
symbol:AT5G07310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL163912 HOGENOM:HOG000057294
ProtClustDB:CLSN2686950 EMBL:AY560885 EMBL:DQ653268 EMBL:BT025717
IPI:IPI00548342 PIR:T49870 RefSeq:NP_196348.1 UniGene:At.50703
ProteinModelPortal:Q9LY29 SMR:Q9LY29 IntAct:Q9LY29 STRING:Q9LY29
EnsemblPlants:AT5G07310.1 GeneID:830622 KEGG:ath:AT5G07310
TAIR:At5g07310 eggNOG:NOG290249 InParanoid:Q9LY29 OMA:GNQSSSH
PhylomeDB:Q9LY29 ArrayExpress:Q9LY29 Genevestigator:Q9LY29
Uniprot:Q9LY29
Length = 263
Score = 147 (56.8 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 46/169 (27%), Positives = 77/169 (45%)
Query: 6 SSMVSN-AKTNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVK-FKGVVPQQNGHWGAQ 63
+ ++ N + ++ NN N PAP D+ + + ++GV + G W A+
Sbjct: 49 TQVIGNQSSSHDNNQHQPVVYNQQDPNPPAPPTQ--DQGLLRKRHYRGVRQRPWGKWAAE 106
Query: 64 IYANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPW-------TDTNNQEPNF 114
I + R+WLGTF++ AA+AYD+AA+K +G + NFP T T PN+
Sbjct: 107 IRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLASNTSTTTGPPNY 166
Query: 115 QNQYSTEAVLNMIRDGTYQPKFADYLRVQSQREDNNSNASLNQIMVHGD 163
+ + N + P F Y Q + NSN +L+ + G+
Sbjct: 167 YSSNNQIYYSNPQTNPQTIPYFNQYYYNQYLHQGGNSNDALSYSLAGGE 215
>TAIR|locus:2171840 [details] [associations]
symbol:AT5G65130 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB013395 HOGENOM:HOG000239817
EMBL:AY560858 EMBL:DQ447109 EMBL:DQ653392 EMBL:BT025723
IPI:IPI00516764 RefSeq:NP_201318.1 UniGene:At.50719
ProteinModelPortal:Q9FJQ2 SMR:Q9FJQ2 IntAct:Q9FJQ2 PaxDb:Q9FJQ2
PRIDE:Q9FJQ2 EnsemblPlants:AT5G65130.1 GeneID:836637
KEGG:ath:AT5G65130 TAIR:At5g65130 eggNOG:NOG331618
InParanoid:Q9FJQ2 OMA:ILQIQTE PhylomeDB:Q9FJQ2
ProtClustDB:CLSN2916268 Genevestigator:Q9FJQ2 Uniprot:Q9FJQ2
Length = 277
Score = 145 (56.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 31 LQPAPKRMRH-DKNVSLVK-FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAY 86
L P M+ D VK ++GV +Q G W A+I N R+WLGTF++ +EAA+AY
Sbjct: 91 LTAKPTSMKKIDVATKPVKLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAY 150
Query: 87 DSAAIKIRGGDSHRNFP 103
D AA KIRG ++ NFP
Sbjct: 151 DQAAHKIRGDNARLNFP 167
Score = 38 (18.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 112 PNFQNQYSTEAVLNMIRDGTYQPKFAD 138
P + Q TE VL+ +P+F +
Sbjct: 199 PQIEKQNKTEEVLSGFSKPEKEPEFGE 225
>TAIR|locus:2015061 [details] [associations]
symbol:AT1G22190 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006970 "response to osmotic stress" evidence=IEP] [GO:0009409
"response to cold" evidence=IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0009409 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0006970 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000239817 EMBL:AC073942 EMBL:BT000907
IPI:IPI00529569 PIR:E86354 RefSeq:NP_173638.1 UniGene:At.25524
UniGene:At.26676 UniGene:At.70046 ProteinModelPortal:Q9LM15
SMR:Q9LM15 MINT:MINT-7262777 STRING:Q9LM15 PaxDb:Q9LM15
PRIDE:Q9LM15 EnsemblPlants:AT1G22190.1 GeneID:838824
KEGG:ath:AT1G22190 TAIR:At1g22190 eggNOG:NOG261785
InParanoid:Q9LM15 OMA:QAICATI PhylomeDB:Q9LM15
ProtClustDB:CLSN2914396 Genevestigator:Q9LM15 Uniprot:Q9LM15
Length = 261
Score = 146 (56.5 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 41/112 (36%), Positives = 58/112 (51%)
Query: 22 SDSNNSTSGLQPAPKRMRHDKNVSLVK----FKGVVPQQNGHWGAQIYA--NHQRIWLGT 75
SD ++ + L P P M+ S K ++GV + G W A+I N R+WLGT
Sbjct: 53 SDLHSFSHHLSPKPVSMKQT-GTSAAKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGT 111
Query: 76 FKSEREAAMAYDSAAIKIRGGDSHRNFPWTDTNNQEPNFQNQYSTEAVLNMI 127
F + EAA+AYD AA K+RG + NFP N++ Q+ S +A L I
Sbjct: 112 FDTAEEAALAYDKAAYKLRGDFARLNFPDLRHNDEYQPLQS--SVDAKLEAI 161
>TAIR|locus:2051359 [details] [associations]
symbol:ERF53 "ERF domain 53" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IEP] [GO:2000070 "regulation of
response to water deprivation" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC006234 EMBL:AY062843 EMBL:AY081659
IPI:IPI00525064 PIR:E84594 RefSeq:NP_179685.1 UniGene:At.27216
ProteinModelPortal:Q9SKT1 SMR:Q9SKT1 STRING:Q9SKT1
EnsemblPlants:AT2G20880.1 GeneID:816622 KEGG:ath:AT2G20880
TAIR:At2g20880 eggNOG:NOG272542 HOGENOM:HOG000112388
InParanoid:Q9SKT1 OMA:SEETGWA PhylomeDB:Q9SKT1
ProtClustDB:CLSN2683557 Genevestigator:Q9SKT1 GO:GO:2000070
Uniprot:Q9SKT1
Length = 336
Score = 147 (56.8 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 33/75 (44%), Positives = 42/75 (56%)
Query: 49 FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTD 106
++GV + G W A+I N R+WLGTF + EAAMAYD A K+RG + NFP
Sbjct: 187 YRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFPELF 246
Query: 107 TNNQEPNFQNQYSTE 121
N QEP +Q E
Sbjct: 247 LNKQEPTPVHQKQCE 261
>TAIR|locus:2010529 [details] [associations]
symbol:AT1G28160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC069471 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC021044 EMBL:AY560863
EMBL:DQ446295 EMBL:DQ652864 IPI:IPI00523290 PIR:E86407
RefSeq:NP_174138.1 UniGene:At.50650 ProteinModelPortal:Q9FZ90
SMR:Q9FZ90 EnsemblPlants:AT1G28160.1 GeneID:839710
KEGG:ath:AT1G28160 TAIR:At1g28160 eggNOG:NOG323238
HOGENOM:HOG000239107 InParanoid:Q9FZ90 OMA:TTKERYW PhylomeDB:Q9FZ90
ProtClustDB:CLSN2914663 Genevestigator:Q9FZ90 Uniprot:Q9FZ90
Length = 245
Score = 143 (55.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 35/101 (34%), Positives = 52/101 (51%)
Query: 8 MVSNAKTNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQIY-- 65
M N NA + S ++ QP P+ +H + +K+ GV + G + A+I
Sbjct: 1 MEFNGNLNAGSCSRSKKSHRQKQQQPQPQPQQH---IEEIKYVGVRRRPWGRYAAEIRNP 57
Query: 66 ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTD 106
+R WLGTF + EAA+AYD AA IRG + NF ++D
Sbjct: 58 TTKERYWLGTFDTAEEAALAYDRAARSIRGLTARTNFVYSD 98
>TAIR|locus:2135282 [details] [associations]
symbol:AT4G39780 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL022605 EMBL:AL161595
HOGENOM:HOG000239817 EMBL:AY560850 EMBL:BT025719 IPI:IPI00529599
PIR:T05015 RefSeq:NP_195688.1 UniGene:At.2297
ProteinModelPortal:O65665 SMR:O65665 MINT:MINT-7263056 PRIDE:O65665
EnsemblPlants:AT4G39780.1 GeneID:830136 KEGG:ath:AT4G39780
TAIR:At4g39780 eggNOG:NOG292506 InParanoid:O65665 OMA:TEYQESE
PhylomeDB:O65665 ProtClustDB:CLSN2916086 Genevestigator:O65665
Uniprot:O65665
Length = 272
Score = 142 (55.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/82 (43%), Positives = 47/82 (57%)
Query: 25 NNSTSGLQPAPKRMRHDKNVSLVK-FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSERE 81
N + L P P M KN++ K ++GV + G W A+I N R+WLGTF + E
Sbjct: 71 NIISPNLAPKPVPM---KNMTAQKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEE 127
Query: 82 AAMAYDSAAIKIRGGDSHRNFP 103
AAMAYD AA K+RG + NFP
Sbjct: 128 AAMAYDLAAYKLRGEFARLNFP 149
>TAIR|locus:2076621 [details] [associations]
symbol:AT3G57600 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010093 "specification of floral organ
identity" evidence=RCA] [GO:0048440 "carpel development"
evidence=RCA] [GO:0048507 "meristem development" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006950 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AL049660
EMBL:AY087243 EMBL:AK227217 EMBL:BT028945 IPI:IPI00530394
PIR:T06760 RefSeq:NP_191319.1 UniGene:At.34819
ProteinModelPortal:Q9SVX5 SMR:Q9SVX5 EnsemblPlants:AT3G57600.1
GeneID:824929 KEGG:ath:AT3G57600 GeneFarm:3672 TAIR:At3g57600
eggNOG:NOG289602 HOGENOM:HOG000239781 InParanoid:Q9SVX5 OMA:ARLWLGS
PhylomeDB:Q9SVX5 ProtClustDB:CLSN2684573 Genevestigator:Q9SVX5
GermOnline:AT3G57600 Uniprot:Q9SVX5
Length = 277
Score = 142 (55.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 23 DSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSER 80
+ ++S + P R + +L +++GV + G W A+I R+WLG+F +
Sbjct: 2 EKSSSMKQWKKGPARGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAE 61
Query: 81 EAAMAYDSAAIKIRGGDSHRNFPWTDTNNQEPNFQN 116
EAAMAYD AA+K+ G D++ N P N + P+ N
Sbjct: 62 EAAMAYDEAALKLYGHDAYLNLPHLQRNTR-PSLSN 96
>TAIR|locus:2132962 [details] [associations]
symbol:CRF4 "AT4G27950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=IDA] [GO:0048366 "leaf development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 EMBL:AL161572 GO:GO:0048366 EMBL:AL035524
GO:GO:0042991 HOGENOM:HOG000237664 ProtClustDB:CLSN2686526
EMBL:BT033088 EMBL:AY560872 IPI:IPI00529666 PIR:T02896
RefSeq:NP_194524.2 UniGene:At.49716 ProteinModelPortal:Q9SUE3
SMR:Q9SUE3 IntAct:Q9SUE3 EnsemblPlants:AT4G27950.1 GeneID:828908
KEGG:ath:AT4G27950 TAIR:At4g27950 eggNOG:NOG284469
InParanoid:Q9SUE3 OMA:FLEPEQE Genevestigator:Q9SUE3 Uniprot:Q9SUE3
Length = 335
Score = 143 (55.4 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 44/124 (35%), Positives = 60/124 (48%)
Query: 17 NNTEASDSNNSTSGLQPAP----KRMRHDKNV--------SLVKFKGVVPQQNGHWGAQI 64
N S++ST + +P KR+ D V + K++GV + G W A+I
Sbjct: 74 NEIRVEPSSSSTGDVSASPTKDRKRINVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEI 133
Query: 65 YANHQR--IWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTDTNNQEPNFQNQYSTEA 122
QR IWLGTF + EAA+ YD+AAIK+RG D+ NF T EP + E
Sbjct: 134 RDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNF----TVQPEPEPVQEQEQEP 189
Query: 123 VLNM 126
NM
Sbjct: 190 ESNM 193
>TAIR|locus:2037698 [details] [associations]
symbol:SHN1 "SHINE 1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0010166 "wax metabolic process" evidence=IMP]
[GO:0010143 "cutin biosynthetic process" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IPI] [GO:0009873 "ethylene
mediated signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC007591 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 GO:GO:0010143 HOGENOM:HOG000237624
ProtClustDB:CLSN2692546 EMBL:AY378101 EMBL:AK117941 EMBL:BT005220
EMBL:AY085720 IPI:IPI00534091 PIR:B86288 RefSeq:NP_172988.1
UniGene:At.11422 ProteinModelPortal:Q9XI33 SMR:Q9XI33 STRING:Q9XI33
EnsemblPlants:AT1G15360.1 GeneID:838105 KEGG:ath:AT1G15360
TAIR:At1g15360 eggNOG:NOG290838 InParanoid:Q9XI33 OMA:DTASSHI
Genevestigator:Q9XI33 GO:GO:0010166 Uniprot:Q9XI33
Length = 199
Score = 134 (52.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 44 VSLVKFKGVVPQQNGHWGAQIYAN--HQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRN 101
V KF+GV + G W A+I +RIWLGTF++ EAA AYD AA+ + G ++ N
Sbjct: 2 VQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTN 61
Query: 102 FPWTDTNNQE 111
FP + N E
Sbjct: 62 FPLNNNNTGE 71
>TAIR|locus:2005704 [details] [associations]
symbol:AT1G75490 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006950 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 EMBL:AC006434 EMBL:AK175902 IPI:IPI00536836
RefSeq:NP_177681.2 UniGene:At.34770 UniGene:At.74106
ProteinModelPortal:Q9LQZ2 SMR:Q9LQZ2 PaxDb:Q9LQZ2 PRIDE:Q9LQZ2
EnsemblPlants:AT1G75490.1 GeneID:843885 KEGG:ath:AT1G75490
GeneFarm:3662 TAIR:At1g75490 eggNOG:NOG311950 HOGENOM:HOG000033697
InParanoid:Q9LQZ2 OMA:ISWEHIN PhylomeDB:Q9LQZ2
ProtClustDB:CLSN2714736 Genevestigator:Q9LQZ2 GermOnline:AT1G75490
Uniprot:Q9LQZ2
Length = 206
Score = 135 (52.6 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 49 FKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
+KGV + G W A+I ++ R+WLGTF + REAA+AYDSAA K+ G ++H N P
Sbjct: 42 YKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLP 98
>TAIR|locus:2183174 [details] [associations]
symbol:RAP2.11 "related to AP2 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0000302 "response to reactive
oxygen species" evidence=IEP] [GO:0009723 "response to ethylene
stimulus" evidence=IEP] [GO:0035865 "cellular response to potassium
ion" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0048528 "post-embryonic root development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0009723 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0000302 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0035865
EMBL:AF296838 GO:GO:0048528 EMBL:AF003104 EMBL:AY560854
IPI:IPI00543417 RefSeq:NP_197480.1 UniGene:At.49039
UniGene:At.71012 ProteinModelPortal:Q6J9S1 SMR:Q6J9S1 STRING:Q6J9S1
EnsemblPlants:AT5G19790.1 GeneID:832099 KEGG:ath:AT5G19790
TAIR:At5g19790 eggNOG:NOG268154 HOGENOM:HOG000242199
InParanoid:Q6J9S1 OMA:IERQISA PhylomeDB:Q6J9S1
ProtClustDB:CLSN2713867 Genevestigator:Q6J9S1 Uniprot:Q6J9S1
Length = 253
Score = 139 (54.0 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 33/83 (39%), Positives = 47/83 (56%)
Query: 32 QPAPKRMRHDKNV-SLVKFKGVVPQQNGHWGAQIYANHQRI--WLGTFKSEREAAMAYDS 88
Q PK+ +K+ + KF GV + +G W A+I Q+I WLGTF++ EAA AYD
Sbjct: 4 QTTPKQKTKEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDE 63
Query: 89 AAIKIRGGDSHRNFPWTDTNNQE 111
AA +RG ++ NF NN +
Sbjct: 64 AACLLRGSNTRTNFANHFPNNSQ 86
>TAIR|locus:2027171 [details] [associations]
symbol:ORA47 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0002213 "defense response to insect"
evidence=IEP] [GO:0009611 "response to wounding" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009611 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009607
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237624 EMBL:AY128309 EMBL:BT003348
IPI:IPI00547563 PIR:A96779 RefSeq:NP_177631.1 UniGene:At.34825
ProteinModelPortal:Q9S7L5 SMR:Q9S7L5 STRING:Q9S7L5
EnsemblPlants:AT1G74930.1 GeneID:843832 KEGG:ath:AT1G74930
TAIR:At1g74930 eggNOG:NOG268869 InParanoid:Q9S7L5 OMA:HSRERIW
PhylomeDB:Q9S7L5 ProtClustDB:CLSN2914217 Genevestigator:Q9S7L5
Uniprot:Q9S7L5
Length = 195
Score = 133 (51.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 31 LQPAPKRMRHDKNVSLV-KFKGVVPQQNGHWGAQIYANH--QRIWLGTFKSEREAAMAYD 87
++ A K +N ++ K+KGV ++ G W ++I H +RIWLG++ + +AA A+D
Sbjct: 2 VKQAMKEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFD 61
Query: 88 SAAIKIRGGDSHRNFP 103
+A +RGGD++ NFP
Sbjct: 62 AAQFCLRGGDANFNFP 77
>TAIR|locus:2034295 [details] [associations]
symbol:AT1G36060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006228 EMBL:AC021666
EMBL:BT005758 EMBL:BT006078 EMBL:AK228415 IPI:IPI00549083
PIR:E86482 RefSeq:NP_564468.1 UniGene:At.39425
ProteinModelPortal:Q9SKW5 SMR:Q9SKW5 STRING:Q9SKW5
EnsemblPlants:AT1G36060.1 GeneID:840510 KEGG:ath:AT1G36060
TAIR:At1g36060 eggNOG:NOG329700 HOGENOM:HOG000239817
InParanoid:Q9SKW5 OMA:YKSASTS PhylomeDB:Q9SKW5
ProtClustDB:CLSN2914986 Genevestigator:Q9SKW5 Uniprot:Q9SKW5
Length = 314
Score = 141 (54.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 32/74 (43%), Positives = 41/74 (55%)
Query: 32 QPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSA 89
QP P K L ++GV + G W A+I N R+WLGTF + EAA+AYD A
Sbjct: 128 QPGPSSGSVSKPAKL--YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRA 185
Query: 90 AIKIRGGDSHRNFP 103
A K+RG + NFP
Sbjct: 186 AFKLRGDSARLNFP 199
>TAIR|locus:2032500 [details] [associations]
symbol:ERF11 "ERF domain protein 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0007154 "cell communication" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009863 "salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0009873 "ethylene mediated signaling
pathway" evidence=RCA;TAS] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000237624 EMBL:AB055882 EMBL:AC010155
EMBL:AF360232 EMBL:AY040032 EMBL:AY086783 IPI:IPI00529285
PIR:B86410 RefSeq:NP_174159.1 UniGene:At.11834
ProteinModelPortal:Q9C5I3 SMR:Q9C5I3 STRING:Q9C5I3 PRIDE:Q9C5I3
EnsemblPlants:AT1G28370.1 GeneID:839733 KEGG:ath:AT1G28370
TAIR:At1g28370 eggNOG:NOG305458 InParanoid:Q9C5I3 OMA:RAIEFRG
PhylomeDB:Q9C5I3 ProtClustDB:CLSN2912737 Genevestigator:Q9C5I3
GermOnline:AT1G28370 Uniprot:Q9C5I3
Length = 166
Score = 121 (47.7 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 47 VKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPW 104
V+++GV + G + A+I R+WLGTF + EAA AYD AI+ RG + NFP
Sbjct: 18 VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPC 77
Query: 105 TDTN 108
+ N
Sbjct: 78 YNIN 81
>TAIR|locus:2089368 [details] [associations]
symbol:EBP "ethylene-responsive element binding protein"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity"
evidence=IEA;ISS;IDA;IMP;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0051707 "response to other
organism" evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0008219 "cell
death" evidence=IMP] [GO:0010286 "heat acclimation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009753 "response
to jasmonic acid stimulus" evidence=IEP] [GO:0009873 "ethylene
mediated signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009735
GO:GO:0009753 GO:GO:0006950 GO:GO:0009873 GO:GO:0003677
GO:GO:0008219 GO:GO:0003700 GO:GO:0006351 GO:GO:0051707 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB022217
HOGENOM:HOG000237624 EMBL:Y09942 EMBL:Z37504 EMBL:AF003096
EMBL:AY059917 EMBL:AY035100 EMBL:AY142562 EMBL:AY087488
IPI:IPI00516463 RefSeq:NP_188299.1 UniGene:At.24773
ProteinModelPortal:P42736 SMR:P42736 IntAct:P42736 STRING:P42736
EnsemblPlants:AT3G16770.1 GeneID:820929 KEGG:ath:AT3G16770
TAIR:At3g16770 eggNOG:NOG300006 InParanoid:P42736 OMA:WSELDAS
PhylomeDB:P42736 ProtClustDB:CLSN2684019 Genevestigator:P42736
GermOnline:AT3G16770 Uniprot:P42736
Length = 248
Score = 137 (53.3 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 37/101 (36%), Positives = 54/101 (53%)
Query: 14 TNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQIYANHQ--RI 71
TN N + ++ +P +R R KNV ++G+ + G W A+I + R+
Sbjct: 51 TNQVNVK-EEAVKKEQATEPGKRRKR--KNV----YRGIRKRPWGKWAAEIRDPRKGVRV 103
Query: 72 WLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTDTNNQEP 112
WLGTF + EAAMAYD AA +IRG + NFP D ++ P
Sbjct: 104 WLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFP--DLHHPPP 142
>TAIR|locus:2008021 [details] [associations]
symbol:ERF3 "ethylene responsive element binding factor
3" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010105 EMBL:AC079279
HOGENOM:HOG000237624 EMBL:AB008105 EMBL:AC012561 EMBL:BT025295
EMBL:AK228091 IPI:IPI00534661 IPI:IPI00837459 PIR:T52011
RefSeq:NP_175479.1 UniGene:At.1645 UniGene:At.71718
ProteinModelPortal:O80339 SMR:O80339 IntAct:O80339 STRING:O80339
EnsemblPlants:AT1G50640.1 GeneID:841486 KEGG:ath:AT1G50640
TAIR:At1g50640 eggNOG:NOG251938 InParanoid:O80339 OMA:TKRYPRT
PhylomeDB:O80339 ProtClustDB:CLSN2682907 Genevestigator:O80339
GermOnline:AT1G50640 Uniprot:O80339
Length = 225
Score = 135 (52.6 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 43 NVSLVKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHR 100
+V ++F+GV + G + A+I R+WLGTF S EAA AYDSAA +RG +
Sbjct: 22 SVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKT 81
Query: 101 NFPWTDTNNQEPNFQ-NQ 117
NFP ++ PN + NQ
Sbjct: 82 NFPIDSSSPPPPNLRFNQ 99
>TAIR|locus:2119555 [details] [associations]
symbol:AT4G13620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL035528 EMBL:AL161537
EMBL:AY560871 EMBL:BT029729 IPI:IPI00527648 PIR:G85147 PIR:T05231
RefSeq:NP_193098.1 UniGene:At.33355 ProteinModelPortal:Q9SVQ0
SMR:Q9SVQ0 MINT:MINT-7263031 PaxDb:Q9SVQ0 EnsemblPlants:AT4G13620.1
GeneID:826996 KEGG:ath:AT4G13620 TAIR:At4g13620 eggNOG:NOG330371
HOGENOM:HOG000112389 InParanoid:Q9SVQ0 OMA:NEWVEIN PhylomeDB:Q9SVQ0
ProtClustDB:CLSN2713732 Genevestigator:Q9SVQ0 Uniprot:Q9SVQ0
Length = 388
Score = 141 (54.7 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 38/108 (35%), Positives = 57/108 (52%)
Query: 2 EEDASSMVSNAKTNANNTEASDSNN--STSGLQPAPKRMRHD-KNVSLVK-FKGVVPQQN 57
+++ + V KT N N ST+ QP + R + + K ++GV +
Sbjct: 181 DQNRNEWVEINKTLTNYPSKGFGNYWLSTTKTQPMKSKTRKVVQTTTPTKLYRGVRQRHW 240
Query: 58 GHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
G W A+I N R+WLGTF++ +AAMAYD+AA +RG +H NFP
Sbjct: 241 GKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFP 288
>TAIR|locus:2182993 [details] [associations]
symbol:PUCHI species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009908 "flower development" evidence=IMP]
[GO:0010102 "lateral root morphogenesis" evidence=IMP] [GO:0010432
"bract development" evidence=IGI;IMP] [GO:0010451 "floral meristem
growth" evidence=IMP] [GO:0010582 "floral meristem determinacy"
evidence=IGI;IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 GO:GO:0010582 EMBL:AC069328
EMBL:AY560873 IPI:IPI00532675 RefSeq:NP_197357.2 UniGene:At.49752
ProteinModelPortal:Q6J9Q2 SMR:Q6J9Q2 STRING:Q6J9Q2
EnsemblPlants:AT5G18560.1 GeneID:831974 KEGG:ath:AT5G18560
GeneFarm:2221 TAIR:At5g18560 eggNOG:NOG237521 HOGENOM:HOG000176627
InParanoid:Q6J9Q2 OMA:SAMITNY Genevestigator:Q6J9Q2 GO:GO:0010432
GO:GO:0010451 GO:GO:0010102 Uniprot:Q6J9Q2
Length = 348
Score = 140 (54.3 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 18 NTEASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQIY--ANHQRIWLGT 75
NT A+ + +T+G +R R K +F GV + G + A+I +R WLGT
Sbjct: 28 NTSANTTTTTTTG----ERRGRRSKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGT 83
Query: 76 FKSEREAAMAYDSAAIKIRGGDSHRNFPWTDTN 108
F + EAA+AYD AA+ +RG + NF +T T+
Sbjct: 84 FDTAHEAALAYDRAALSMRGTQARTNFVYTPTD 116
>TAIR|locus:2204730 [details] [associations]
symbol:AT1G77640 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC010704 HOGENOM:HOG000237624
ProtClustDB:CLSN2714459 EMBL:AY560843 EMBL:BT012629 EMBL:AK176224
IPI:IPI00519885 PIR:A96806 RefSeq:NP_177887.1 UniGene:At.17793
ProteinModelPortal:Q9CAP4 SMR:Q9CAP4 PRIDE:Q9CAP4
EnsemblPlants:AT1G77640.1 GeneID:844099 KEGG:ath:AT1G77640
TAIR:At1g77640 eggNOG:NOG281332 InParanoid:Q9CAP4 OMA:FLMNIDE
PhylomeDB:Q9CAP4 Genevestigator:Q9CAP4 Uniprot:Q9CAP4
Length = 244
Score = 136 (52.9 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 32/89 (35%), Positives = 52/89 (58%)
Query: 19 TEASDSNNSTSGLQPAPKRMRHD--KNVSLVKFKGVVPQQNGHWGAQIYANHQ--RIWLG 74
T +S ++S+S + +RH KN + K+KGV + G W +I A +Q RIWLG
Sbjct: 12 TSSSSLSHSSSSSSSSTSALRHQSCKN-KIKKYKGVRMRSWGSWVTEIRAPNQKTRIWLG 70
Query: 75 TFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
++ + AA AYD+A + ++G ++ NFP
Sbjct: 71 SYSTAEAAARAYDAALLCLKGPKANLNFP 99
>TAIR|locus:2128429 [details] [associations]
symbol:CRF2 "AT4G23750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA;IDA] [GO:0048825 "cotyledon development"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048364 "root development" evidence=IEP] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0006606 "protein import into
nucleus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 EMBL:AL161560 GO:GO:0048825 GO:GO:0042991
EMBL:AL035394 HOGENOM:HOG000237664 ProtClustDB:CLSN2685996
EMBL:AY057475 EMBL:AY140049 EMBL:BT015038 IPI:IPI00549106
PIR:T05607 RefSeq:NP_194106.1 RefSeq:NP_974599.1 UniGene:At.26323
UniGene:At.67317 ProteinModelPortal:Q9SUQ2 SMR:Q9SUQ2 IntAct:Q9SUQ2
EnsemblPlants:AT4G23750.1 EnsemblPlants:AT4G23750.2 GeneID:828475
KEGG:ath:AT4G23750 TAIR:At4g23750 eggNOG:NOG263971
InParanoid:Q9SUQ2 OMA:PRIKFTE PhylomeDB:Q9SUQ2
Genevestigator:Q9SUQ2 Uniprot:Q9SUQ2
Length = 343
Score = 139 (54.0 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 48 KFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWT 105
KF+GV + G W A+I R+WLGT+ + EAAM YD+AAI++RG D+ NF T
Sbjct: 121 KFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVT 180
Query: 106 DTNNQE 111
T E
Sbjct: 181 PTTATE 186
>TAIR|locus:2136078 [details] [associations]
symbol:CRF1 "AT4G11140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA;IDA] [GO:0048366 "leaf development" evidence=RCA;IMP]
[GO:0048825 "cotyledon development" evidence=RCA;IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161531
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0048366 GO:GO:0048825 GO:GO:0042991 EMBL:AY560849
EMBL:AF080120 EMBL:AL049876 EMBL:BT025176 IPI:IPI00542737
PIR:T01919 RefSeq:NP_192852.1 UniGene:At.33584
ProteinModelPortal:O82503 SMR:O82503 IntAct:O82503 PRIDE:O82503
EnsemblPlants:AT4G11140.1 GeneID:826715 KEGG:ath:AT4G11140
TAIR:At4g11140 eggNOG:NOG254393 HOGENOM:HOG000237664
InParanoid:O82503 OMA:SSWHVED PhylomeDB:O82503
ProtClustDB:CLSN2685996 Genevestigator:O82503 Uniprot:O82503
Length = 287
Score = 137 (53.3 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 48 KFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
KF+GV + G W A+I + R+WLGTF + EAA+ YD+AAI++RG ++ NFP
Sbjct: 86 KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP 143
>TAIR|locus:2201103 [details] [associations]
symbol:DREB26 "dehydration response element-binding
protein 26" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP] [GO:0034605
"cellular response to heat" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0071497 "cellular response to freezing" evidence=IEP]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0034605
GO:GO:0009753 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009751 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000237624 GO:GO:0071497 EMBL:AC013482
EMBL:AK176679 EMBL:BT024616 EMBL:AY085925 IPI:IPI00521591
PIR:D86352 RefSeq:NP_173609.1 UniGene:At.41636
ProteinModelPortal:Q9SFE4 SMR:Q9SFE4 STRING:Q9SFE4 PaxDb:Q9SFE4
PRIDE:Q9SFE4 EnsemblPlants:AT1G21910.1 GeneID:838793
KEGG:ath:AT1G21910 TAIR:At1g21910 eggNOG:NOG318827
InParanoid:Q9SFE4 OMA:YEDADIP PhylomeDB:Q9SFE4
ProtClustDB:CLSN2714459 Genevestigator:Q9SFE4 Uniprot:Q9SFE4
Length = 230
Score = 134 (52.2 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 30/111 (27%), Positives = 60/111 (54%)
Query: 1 MEEDASSMVSNAKTNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHW 60
++++ S+ K + + S++S+S + +K + K+KGV + G W
Sbjct: 2 VKQERKIQTSSTKKEMPLSSSPSSSSSSSSSSSSSSCKNKNKKSKIKKYKGVRMRSWGSW 61
Query: 61 GAQIYANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTDTNN 109
++I A +Q RIWLG++ + AA AYD A + ++G ++ NFP + +++
Sbjct: 62 VSEIRAPNQKTRIWLGSYSTAEAAARAYDVALLCLKGPQANLNFPTSSSSH 112
>TAIR|locus:2086203 [details] [associations]
symbol:ESE1 "ethylene and salt inducible 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB025608
HOGENOM:HOG000237624 EMBL:AY974196 EMBL:AY560847 EMBL:BT028890
IPI:IPI00539423 RefSeq:NP_188963.2 UniGene:At.50677
ProteinModelPortal:Q9LTC6 SMR:Q9LTC6 EnsemblPlants:AT3G23220.1
GeneID:821900 KEGG:ath:AT3G23220 TAIR:At3g23220 eggNOG:NOG265349
InParanoid:Q9LTC6 OMA:NFPAEAR PhylomeDB:Q9LTC6
ProtClustDB:CLSN2920270 Genevestigator:Q9LTC6 Uniprot:Q9LTC6
Length = 139
Score = 117 (46.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 43 NVSLVKFKGVVPQQNGHWGAQIY--ANH-QRIWLGTFKSEREAAMAYDSAAIKIRGGDSH 99
N + +K++GV + G + A+I A H R+WLGTF + +AA AYD AA +RG +
Sbjct: 8 NTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAI 67
Query: 100 RNFP 103
NFP
Sbjct: 68 LNFP 71
>TAIR|locus:2197076 [details] [associations]
symbol:RAP2.12 "related to AP2 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070483 "detection of hypoxia" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005634 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC009324 GO:GO:0070483 HOGENOM:HOG000237624
EMBL:AY037260 EMBL:AY057545 EMBL:AY113051 EMBL:AY088204
EMBL:AF003105 IPI:IPI00535772 PIR:D96579 RefSeq:NP_001031185.1
RefSeq:NP_175794.1 UniGene:At.20952 UniGene:At.21295
ProteinModelPortal:Q9SSA8 SMR:Q9SSA8 IntAct:Q9SSA8 STRING:Q9SSA8
EnsemblPlants:AT1G53910.1 EnsemblPlants:AT1G53910.2 GeneID:841829
KEGG:ath:AT1G53910 TAIR:At1g53910 eggNOG:NOG262386
InParanoid:Q9SSA8 OMA:NEDAVTT PhylomeDB:Q9SSA8
ProtClustDB:CLSN2682146 Genevestigator:Q9SSA8 Uniprot:Q9SSA8
Length = 358
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 38/107 (35%), Positives = 57/107 (53%)
Query: 20 EASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQIYANHQ--RIWLGTFK 77
E S +GL ++ + K + +++G+ + G W A+I + RIWLGTFK
Sbjct: 98 EGSVFGKKVTGLDGDAEKSANRKRKN--QYRGIRQRPWGKWAAEIRDPREGARIWLGTFK 155
Query: 78 SEREAAMAYDSAAIKIRGGDSHRNFPWTDTNNQEPNFQNQYSTEAVL 124
+ EAA AYD+AA +IRG + NFP N + N Q + S +A L
Sbjct: 156 TAEEAARAYDAAARRIRGSKAKVNFP---EENMKANSQKR-SVKANL 198
>UNIPROTKB|Q7XKC5 [details] [associations]
symbol:LOC_Os04g58000 "B3 domain-containing protein
Os04g0676600" species:39947 "Oryza sativa Japonica Group"
[GO:0003677 "DNA binding" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AP008210 EMBL:CM000141
HSSP:Q9ZWM9 ProtClustDB:CLSN2695240 EMBL:AL606668 EMBL:AK072874
EMBL:BR000655 RefSeq:NP_001054257.1 UniGene:Os.53477 PRIDE:Q7XKC5
EnsemblPlants:LOC_Os04g58000.1 GeneID:4337398 KEGG:osa:4337398
Gramene:Q7XKC5 eggNOG:NOG257628 HOGENOM:HOG000241121 OMA:HEKESGA
Uniprot:Q7XKC5
Length = 433
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 34/100 (34%), Positives = 53/100 (53%)
Query: 168 YRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMR 227
YR + +KELT SDVG + R+V+PK+ A + P + + G + +DD KL
Sbjct: 293 YRVILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREG---VMLKMDDF------KLET 343
Query: 228 PWKFRYCFWRSSQSYVFT-RGWNRFVKEKKLKEKDIITFY 266
W F+Y FW +++S ++ FVK+ L+ DI Y
Sbjct: 344 TWNFKYRFWPNNKSRMYVLESTGGFVKQHVLQTGDIFIIY 383
>TAIR|locus:2060385 [details] [associations]
symbol:AT2G22200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC007168 HOGENOM:HOG000239817
EMBL:AY090378 EMBL:AY143836 IPI:IPI00527119 PIR:B84610
RefSeq:NP_179810.1 UniGene:At.39467 ProteinModelPortal:Q9SIE4
SMR:Q9SIE4 EnsemblPlants:AT2G22200.1 GeneID:816754
KEGG:ath:AT2G22200 TAIR:At2g22200 eggNOG:euNOG21323
InParanoid:Q9SIE4 OMA:EFEEIGS PhylomeDB:Q9SIE4
ProtClustDB:CLSN2683732 Genevestigator:Q9SIE4 Uniprot:Q9SIE4
Length = 261
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 26 NSTSGLQPAPKRMRH-DKNVSLVK--FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSER 80
++ S L P RM++ + S K ++GV + G W A+I N R+WLGTF++
Sbjct: 45 STISNLSPNRIRMKNLTPSTSKTKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAE 104
Query: 81 EAAMAYDSAAIKIRGGDSHRNFP 103
+AA+AYD AA ++RG + NFP
Sbjct: 105 KAALAYDQAAFQLRGDIAKLNFP 127
>TAIR|locus:1005716457 [details] [associations]
symbol:RAP2.9 "related to AP2 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AB073166 EMBL:AY560869 EMBL:BT024689 EMBL:AF003102 EMBL:Z37270
IPI:IPI00535753 RefSeq:NP_849340.1 UniGene:At.47204
ProteinModelPortal:Q8W3M3 SMR:Q8W3M3 EnsemblPlants:AT4G06746.1
GeneID:826148 KEGG:ath:AT4G06746 TAIR:At4g06746 eggNOG:NOG320996
InParanoid:Q8W3M3 OMA:NKLPEAY PhylomeDB:Q8W3M3
ProtClustDB:CLSN2918026 Genevestigator:Q8W3M3 Uniprot:Q8W3M3
Length = 150
Score = 115 (45.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 35 PKRMRHDKNVSLVKFKGVVPQQNGHWGAQIYANHQR--IWLGTFKSEREAAMAYDSAAIK 92
PKR N ++KG+ ++ G W A+I ++R IWLG++K+ AA AYD+A
Sbjct: 24 PKRNLISSNEK--RYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFY 81
Query: 93 IRGGDSHRNFP 103
+RG + NFP
Sbjct: 82 LRGPSARLNFP 92
>TAIR|locus:2170101 [details] [associations]
symbol:ERF110 "ethylene response factor 110"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB026650
EMBL:AJ580378 IPI:IPI00543457 RefSeq:NP_199819.3 UniGene:At.29751
ProteinModelPortal:Q70II3 SMR:Q70II3 STRING:Q70II3
EnsemblPlants:AT5G50080.1 GeneID:835072 KEGG:ath:AT5G50080
TAIR:At5g50080 eggNOG:NOG295694 HOGENOM:HOG000210042
InParanoid:Q70II3 OMA:EDLINYW PhylomeDB:Q70II3
ProtClustDB:CLSN2920550 Genevestigator:Q70II3 Uniprot:Q70II3
Length = 220
Score = 129 (50.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 35 PKRMRHDKNVSLVKFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEREAAMAYDSAAIK 92
P+ R K +++GV + G W A+I H+ R+WLGTF + AA AYD AA++
Sbjct: 67 PEEAREKKR----RYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALR 122
Query: 93 IRGGDSHRNFP 103
RG + NFP
Sbjct: 123 FRGNKAKLNFP 133
>TAIR|locus:2087065 [details] [associations]
symbol:ERF4 "ethylene responsive element binding factor
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0009723 "response to ethylene
stimulus" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0009864 "induced systemic resistance, jasmonic acid mediated
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0009873
GO:GO:0009723 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 GO:GO:0010105
GO:GO:0016604 HOGENOM:HOG000237624 GO:GO:0009864 EMBL:AF003098
EMBL:AB008106 EMBL:AP000413 EMBL:AY140030 EMBL:BT010325
EMBL:AY086232 IPI:IPI00539614 PIR:T52019 RefSeq:NP_188139.1
UniGene:At.47551 ProteinModelPortal:O80340 SMR:O80340 IntAct:O80340
STRING:O80340 EnsemblPlants:AT3G15210.1 GeneID:820752
KEGG:ath:AT3G15210 TAIR:At3g15210 eggNOG:NOG298559
InParanoid:O80340 OMA:DCASPPT PhylomeDB:O80340
ProtClustDB:CLSN2679790 Genevestigator:O80340 GermOnline:AT3G15210
Uniprot:O80340
Length = 222
Score = 129 (50.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 30 GLQPAPKRMRHD-KNVSLVKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAY 86
GL+P P N ++++GV + G + A+I R+WLGTF + EAA AY
Sbjct: 5 GLKPDPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAY 64
Query: 87 DSAAIKIRGGDSHRNFP 103
D+AA RG + NFP
Sbjct: 65 DTAARDFRGAKAKTNFP 81
>TAIR|locus:2032170 [details] [associations]
symbol:LEC2 "LEAFY COTYLEDON 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0010344 "seed
oilbody biogenesis" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010601 "positive regulation of auxin
biosynthetic process" evidence=IMP] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010262 GO:GO:0010431 EMBL:AC021044
EMBL:AF400123 EMBL:AF400124 EMBL:AJ630496 EMBL:AY568668
EMBL:DQ446296 EMBL:DQ652865 IPI:IPI00516936 PIR:C86409
RefSeq:NP_564304.1 UniGene:At.26290 ProteinModelPortal:Q1PFR7
SMR:Q1PFR7 STRING:Q1PFR7 EnsemblPlants:AT1G28300.1 GeneID:839724
KEGG:ath:AT1G28300 TAIR:At1g28300 eggNOG:NOG295110
HOGENOM:HOG000113311 OMA:NEGRENE PhylomeDB:Q1PFR7
ProtClustDB:CLSN2688053 Genevestigator:Q1PFR7 GO:GO:0010601
GO:GO:0010344 Uniprot:Q1PFR7
Length = 363
Score = 134 (52.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 169 RQLFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMRP 228
R L +KEL SDVG L R+V+PK+ A P +S+ G V M VF M+
Sbjct: 168 RVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGI------VVQMRDVFS---MQS 218
Query: 229 WKFRYCFWRSSQSYVFT-RGWNRFVKEKKLKEKDIITFYACECAN 272
W F+Y FW +++S ++ FVK+ + D +T Y E N
Sbjct: 219 WSFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIYEDESKN 263
>TAIR|locus:2090975 [details] [associations]
symbol:RAP2.2 "related to AP2 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=IEP] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB022220
HOGENOM:HOG000237624 ProtClustDB:CLSN2682146 EMBL:AY054539
EMBL:BT000374 EMBL:AY085580 EMBL:AF003095 IPI:IPI00519633
IPI:IPI00544839 RefSeq:NP_566482.1 RefSeq:NP_850582.1
UniGene:At.25146 ProteinModelPortal:Q9LUM4 SMR:Q9LUM4 STRING:Q9LUM4
EnsemblPlants:AT3G14230.1 GeneID:820643 KEGG:ath:AT3G14230
TAIR:At3g14230 eggNOG:NOG250271 InParanoid:Q9LUM4 OMA:SAFDCED
PhylomeDB:Q9LUM4 Genevestigator:Q9LUM4 Uniprot:Q9LUM4
Length = 379
Score = 134 (52.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 48/153 (31%), Positives = 72/153 (47%)
Query: 5 ASSMVSNAKTNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQI 64
AS+ VS + A + S + + KR R KN +++G+ + G W A+I
Sbjct: 90 ASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKR--KN----QYRGIRQRPWGKWAAEI 143
Query: 65 YANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTDTNNQEPNFQNQYSTEA 122
+ R WLGTF + EAA AYD+AA +IRG + NFP + P+ +Q A
Sbjct: 144 RDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFP----EEKNPSVVSQKRPSA 199
Query: 123 VLNMIRDGTYQPKFADYLRVQ----SQREDNNS 151
N ++ +P + L Q SQ+ NNS
Sbjct: 200 KTNNLQKSVAKPNKSVTLVQQPTHLSQQYCNNS 232
>TAIR|locus:2176511 [details] [associations]
symbol:AT5G43410 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB025638 HOGENOM:HOG000237624
EMBL:AY560864 EMBL:DQ447034 EMBL:DQ653344 IPI:IPI00538759
RefSeq:NP_199154.1 UniGene:At.50627 ProteinModelPortal:Q9LSX0
SMR:Q9LSX0 EnsemblPlants:AT5G43410.1 GeneID:834360
KEGG:ath:AT5G43410 TAIR:At5g43410 eggNOG:NOG244602
InParanoid:Q9LSX0 OMA:HEYNMGS PhylomeDB:Q9LSX0
ProtClustDB:CLSN2681785 Genevestigator:Q9LSX0 Uniprot:Q9LSX0
Length = 131
Score = 113 (44.8 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 48 KFKGVVPQQNGHWGAQIYAN--H-QRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
K++GV + G + A+I + H +R+WLGTF + EAA AYD AA +RG + NFP
Sbjct: 14 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFP 72
>TAIR|locus:2086213 [details] [associations]
symbol:TDR1 "Transcriptional Regulator of Defense
Response 1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337
EMBL:AB025608 HOGENOM:HOG000237624 EMBL:AJ580377 IPI:IPI00538070
RefSeq:NP_188964.2 UniGene:At.37741 ProteinModelPortal:Q9LTC5
SMR:Q9LTC5 STRING:Q9LTC5 EnsemblPlants:AT3G23230.1 GeneID:821901
KEGG:ath:AT3G23230 TAIR:At3g23230 eggNOG:NOG239208
InParanoid:Q9LTC5 OMA:DKQARFR PhylomeDB:Q9LTC5
ProtClustDB:CLSN2918542 Genevestigator:Q9LTC5 Uniprot:Q9LTC5
Length = 139
Score = 112 (44.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 48 KFKGVVPQQNGHWGAQIY---ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
+F+GV + G + A+I N R+WLGTF++ EAA AYD AA +RG + NFP
Sbjct: 19 RFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFP 77
>TAIR|locus:2009655 [details] [associations]
symbol:ERF8 "ethylene response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC008007 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000237624 ProtClustDB:CLSN2679790 EMBL:AB036884
EMBL:AK117541 EMBL:BT005401 IPI:IPI00546471 PIR:D96572
RefSeq:NP_175725.1 UniGene:At.4604 ProteinModelPortal:Q9MAI5
SMR:Q9MAI5 IntAct:Q9MAI5 EnsemblPlants:AT1G53170.1 GeneID:841751
KEGG:ath:AT1G53170 TAIR:At1g53170 eggNOG:NOG271218
InParanoid:Q9MAI5 OMA:HESNAAK PhylomeDB:Q9MAI5
Genevestigator:Q9MAI5 GermOnline:AT1G53170 Uniprot:Q9MAI5
Length = 185
Score = 123 (48.4 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 26 NSTSGLQPAP----KRMRHDKNVSL-VKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKS 78
N T GL+P P H+ N + ++++GV + G + A+I R+WLGTF +
Sbjct: 3 NITMGLKPDPVAPTNPTHHESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDT 62
Query: 79 EREAAMAYDSAAIKIRGGDSHRNF 102
++AA AYD+AA RG + NF
Sbjct: 63 AQQAARAYDAAARDFRGVKAKTNF 86
>TAIR|locus:2123708 [details] [associations]
symbol:AT4G28140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 HSSP:O80337 EMBL:AL161572 HOGENOM:HOG000112388
EMBL:DQ011579 EMBL:AY074574 EMBL:AY097394 IPI:IPI00520768
PIR:T09030 RefSeq:NP_194543.1 UniGene:At.32043 UniGene:At.72101
ProteinModelPortal:Q9M0J3 SMR:Q9M0J3 PRIDE:Q9M0J3
EnsemblPlants:AT4G28140.1 GeneID:828929 KEGG:ath:AT4G28140
TAIR:At4g28140 eggNOG:NOG269342 InParanoid:Q9M0J3 OMA:DQKEPET
PhylomeDB:Q9M0J3 ProtClustDB:CLSN2915905 Genevestigator:Q9M0J3
Uniprot:Q9M0J3
Length = 292
Score = 130 (50.8 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 49 FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTD 106
++GV +Q G W A+I + R+WLGTF + EAAMAYD A K+RG + NFP
Sbjct: 143 YRGVRQRQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNFP-EH 201
Query: 107 TNNQEPNFQNQYSTE 121
N+E + S++
Sbjct: 202 FVNKESELHDSNSSD 216
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 135 (52.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 36/133 (27%), Positives = 65/133 (48%)
Query: 140 LRVQSQREDNNSNASL----NQIMVHGDEQFAYRQL---FQKELTPSDVGKLNRLVIPKK 192
L+V++ ++ + +L Q+++ Q +R L F K LT SD +PKK
Sbjct: 87 LKVENNSDETYAEITLMPDTTQVVIPTQNQNQFRPLVNSFTKVLTASDTSVHGGFSVPKK 146
Query: 193 YAVKYFPFISENAGENAINGGVDDMELVFFDKLMRPWKFRYCFWRSSQSYVFTRGWNRFV 252
+A++ P + ++ + E++ D W+FR+ + ++Q ++ T GWN F
Sbjct: 147 HAIECLPPLD-------MSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFT 199
Query: 253 KEKKLKEKDIITF 265
KKL E D+I F
Sbjct: 200 TSKKLVEGDVIVF 212
>TAIR|locus:2029491 [details] [associations]
symbol:RAP2.4 "related to AP2 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IC;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006970 "response to osmotic
stress" evidence=IEP] [GO:0071472 "cellular response to salt
stress" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IEP;IMP] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009873 "ethylene mediated signaling pathway" evidence=IMP]
[GO:0010017 "red or far-red light signaling pathway" evidence=IGI]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IMP] [GO:0045595
"regulation of cell differentiation" evidence=IMP] [GO:0009409
"response to cold" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009611
GO:GO:0009873 GO:GO:0045595 GO:GO:0009409 GO:GO:0009414
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0071472 GO:GO:0010017 EMBL:AC009243 EMBL:AC012680
HOGENOM:HOG000239817 UniGene:At.25524 EMBL:AF370152 EMBL:AY150468
EMBL:AF003097 IPI:IPI00519366 RefSeq:NP_177931.1 UniGene:At.71798
ProteinModelPortal:Q8H1E4 SMR:Q8H1E4 MINT:MINT-7262714
STRING:Q8H1E4 EnsemblPlants:AT1G78080.1 GeneID:844143
KEGG:ath:AT1G78080 TAIR:At1g78080 eggNOG:NOG306355
InParanoid:Q8H1E4 OMA:KLEAICK PhylomeDB:Q8H1E4
ProtClustDB:CLSN2679481 Genevestigator:Q8H1E4 Uniprot:Q8H1E4
Length = 334
Score = 131 (51.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 49 FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
++GV + G W A+I N R+WLGTF + EAA+AYD AA K+RG + NFP
Sbjct: 152 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFP 208
>TAIR|locus:2156171 [details] [associations]
symbol:AT5G61890 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0050832 "defense response to fungus"
evidence=IEP] [GO:0006865 "amino acid transport" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0050832 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AB022212 EMBL:AY560862 IPI:IPI00539427
RefSeq:NP_200995.1 UniGene:At.29079 ProteinModelPortal:Q9FH54
SMR:Q9FH54 PaxDb:Q9FH54 PRIDE:Q9FH54 EnsemblPlants:AT5G61890.1
GeneID:836310 KEGG:ath:AT5G61890 TAIR:At5g61890 eggNOG:NOG273323
HOGENOM:HOG000057294 InParanoid:Q9FH54 OMA:FSARSQH PhylomeDB:Q9FH54
ProtClustDB:CLSN2686950 ArrayExpress:Q9FH54 Genevestigator:Q9FH54
Uniprot:Q9FH54
Length = 248
Score = 128 (50.1 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 6 SSMVSNAKTNANNTEASDSNNSTSGLQPA-PKRM---RHDKNVSLVK--FKGVVPQQNGH 59
+ ++ N ++ +++ +S +N S P P + H L + ++GV + G
Sbjct: 41 TQVIGNQQSKSHDNISSIDDNYPSVYNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGK 100
Query: 60 WGAQIYANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
W A+I + R+WLGTF++ AA+AYD AA+K +G + NFP
Sbjct: 101 WAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFP 146
>TAIR|locus:2183861 [details] [associations]
symbol:Rap2.6L "related to AP2 6l" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0071497 "cellular response to freezing"
evidence=IEP] [GO:0009407 "toxin catabolic process" evidence=RCA]
[GO:0010260 "organ senescence" evidence=RCA] [GO:0010583 "response
to cyclopentenone" evidence=RCA] [GO:0046482 "para-aminobenzoic
acid metabolic process" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009753 GO:GO:0009873
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 GO:GO:0009751 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL163491 EMBL:AY560861
EMBL:BT011609 EMBL:BT012250 IPI:IPI00516288 PIR:T48580
RefSeq:NP_196837.1 UniGene:At.32083 UniGene:At.67565
UniGene:At.75194 ProteinModelPortal:Q9LYU3 SMR:Q9LYU3 IntAct:Q9LYU3
STRING:Q9LYU3 PaxDb:Q9LYU3 PRIDE:Q9LYU3 EnsemblPlants:AT5G13330.1
GeneID:831174 KEGG:ath:AT5G13330 TAIR:At5g13330 eggNOG:NOG270575
HOGENOM:HOG000112331 InParanoid:Q9LYU3 OMA:PRRRHYR PhylomeDB:Q9LYU3
ProtClustDB:CLSN2916600 Genevestigator:Q9LYU3 GO:GO:0071497
Uniprot:Q9LYU3
Length = 212
Score = 125 (49.1 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 49 FKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
++GV + G W A+I + R+WLGTF++ EAA+AYD AA+K +G + NFP
Sbjct: 39 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFP 95
>TAIR|locus:2018289 [details] [associations]
symbol:ERF14 "Ethylene-responsive element binding factor
14" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009873
"ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC000104 HOGENOM:HOG000237624
ProtClustDB:CLSN2681785 EMBL:AY560880 EMBL:BT026421 IPI:IPI00531659
PIR:D86175 RefSeq:NP_171932.1 UniGene:At.50643
ProteinModelPortal:P93822 SMR:P93822 STRING:P93822 PRIDE:P93822
EnsemblPlants:AT1G04370.1 GeneID:839539 KEGG:ath:AT1G04370
TAIR:At1g04370 eggNOG:NOG309663 InParanoid:P93822 OMA:NKTHNIN
PhylomeDB:P93822 Genevestigator:P93822 Uniprot:P93822
Length = 133
Score = 109 (43.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 48 KFKGVVPQQNGHWGAQIYAN--H-QRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
K++GV + G + A+I + H +R+WLGTF + +AA AYD AA +RG + NFP
Sbjct: 19 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFP 77
>TAIR|locus:2024249 [details] [associations]
symbol:ERF10 "ERF domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 EMBL:AC003027
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AB047649 EMBL:AY560879 IPI:IPI00526738 PIR:E86168
RefSeq:NP_171876.1 UniGene:At.50567 ProteinModelPortal:Q9ZWA2
SMR:Q9ZWA2 STRING:Q9ZWA2 EnsemblPlants:AT1G03800.1 GeneID:839173
KEGG:ath:AT1G03800 TAIR:At1g03800 eggNOG:NOG291029 OMA:QTAVEEP
PhylomeDB:Q9ZWA2 ProtClustDB:CLSN2914355 Genevestigator:Q9ZWA2
Uniprot:Q9ZWA2
Length = 245
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 47 VKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
V+++GV + G + A+I +R+WLG+F + EAA AYDSAAI+ RG + NFP
Sbjct: 51 VRYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFP 109
>UNIPROTKB|Q8VXC3 [details] [associations]
symbol:ebp-89 "Ethylene responsive protein" species:4530
"Oryza sativa" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
EMBL:AJ304840 ProteinModelPortal:Q8VXC3 SMR:Q8VXC3
KEGG:dosa:Os03t0182800-01 Gramene:Q8VXC3 Genevestigator:Q8VXC3
Uniprot:Q8VXC3
Length = 326
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/107 (36%), Positives = 58/107 (54%)
Query: 2 EEDASSMVSNAKTNA--NNTEASD-SNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNG 58
E A S VS+ K+ A + + +SD S++S + A K K++GV + +G
Sbjct: 72 ESLAVSCVSSPKSKAVPSFSFSSDVSSSSRPRRRVAAAAAGRRKASKKSKYRGVRLRPSG 131
Query: 59 HWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
+ A+I +R+WLGT+ S EAAMAYD A +IRG + NFP
Sbjct: 132 RFAAEIRDPKKGRRVWLGTYGSAEEAAMAYDREARRIRGKGARLNFP 178
>TAIR|locus:2124504 [details] [associations]
symbol:AT4G18450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] [GO:0009873 "ethylene mediated signaling
pathway" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337 EMBL:AL161548
EMBL:AL021710 EMBL:AY560868 IPI:IPI00543138 PIR:T04541
RefSeq:NP_193580.1 UniGene:At.32901 ProteinModelPortal:O49515
SMR:O49515 EnsemblPlants:AT4G18450.1 GeneID:827576
KEGG:ath:AT4G18450 TAIR:At4g18450 eggNOG:NOG286829
HOGENOM:HOG000241588 OMA:EWTEILD PhylomeDB:O49515
ProtClustDB:CLSN2915846 Genevestigator:O49515 Uniprot:O49515
Length = 303
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 48 KFKGVVPQQNGHWGAQIY---ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGD-SHRNF 102
K++GV + G + A+I N R+WLGTF++ EAAMAYD AA++IRG +H NF
Sbjct: 109 KYRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKAHTNF 167
>TAIR|locus:2148022 [details] [associations]
symbol:SHN2 "shine2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL360314 HOGENOM:HOG000237624
EMBL:AY560865 IPI:IPI00534793 RefSeq:NP_196680.1 UniGene:At.70314
ProteinModelPortal:Q9LFN7 SMR:Q9LFN7 PRIDE:Q9LFN7
EnsemblPlants:AT5G11190.1 GeneID:830989 KEGG:ath:AT5G11190
TAIR:At5g11190 eggNOG:NOG292617 InParanoid:Q9LFN7 OMA:DQLAMEM
PhylomeDB:Q9LFN7 ProtClustDB:CLSN2692546 Genevestigator:Q9LFN7
Uniprot:Q9LFN7
Length = 189
Score = 120 (47.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 48 KFKGVVPQQNGHWGAQIYAN--HQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
KF+GV +Q G W ++I +R+WLGTF++ AA AYD AA+ + G ++ NFP
Sbjct: 6 KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFP 63
>TAIR|locus:2145477 [details] [associations]
symbol:SHN3 "shine3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006950
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC006258
HOGENOM:HOG000237624 ProtClustDB:CLSN2692546 EMBL:AK118780
EMBL:BT005461 EMBL:BX834028 IPI:IPI00539200 IPI:IPI00541689
RefSeq:NP_197921.1 RefSeq:NP_851073.1 UniGene:At.19636
ProteinModelPortal:Q3E958 SMR:Q3E958 IntAct:Q3E958
EnsemblPlants:AT5G25390.2 GeneID:832611 KEGG:ath:AT5G25390
TAIR:At5g25390 eggNOG:NOG243679 InParanoid:Q3E958 OMA:LDNDSSH
PhylomeDB:Q3E958 Genevestigator:Q3E958 Uniprot:Q3E958
Length = 189
Score = 120 (47.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 48 KFKGVVPQQNGHWGAQIYAN--HQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWT 105
KF+GV +Q G W ++I +R+WLGTF + AA AYD AA+ + G + NFP
Sbjct: 6 KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPVI 65
Query: 106 DTN 108
+N
Sbjct: 66 KSN 68
>TAIR|locus:2062954 [details] [associations]
symbol:CRF5 "AT2G46310" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IGI] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA;IDA] [GO:0048366 "leaf development"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 GO:GO:0048366 EMBL:AC005397 GO:GO:0048825
GO:GO:0042991 HOGENOM:HOG000237664 EMBL:AY074638 EMBL:BT003121
EMBL:AK227661 IPI:IPI00528508 PIR:C84901 RefSeq:NP_182154.1
UniGene:At.37025 ProteinModelPortal:O82339 SMR:O82339 IntAct:O82339
EnsemblPlants:AT2G46310.1 GeneID:819239 KEGG:ath:AT2G46310
TAIR:At2g46310 eggNOG:NOG253877 InParanoid:O82339 OMA:SHNDETE
PhylomeDB:O82339 ProtClustDB:CLSN2683458 Genevestigator:O82339
Uniprot:O82339
Length = 294
Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 45 SLVKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNF 102
S+VK++GV + G + A+I ++ R+WLGTF + EAA+ YD AAI+I+G ++ NF
Sbjct: 95 SVVKYRGVRQRPWGKFAAEIRDPSSRTRLWLGTFATAEEAAIGYDRAAIRIKGHNAQTNF 154
>TAIR|locus:2167659 [details] [associations]
symbol:ERF9 "erf domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0016020 "membrane" evidence=IDA]
[GO:0006857 "oligopeptide transport" evidence=RCA] [GO:0009873
"ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0009873 GO:GO:0016020
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB005239 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AB047648 EMBL:AY560856 EMBL:BT015876 EMBL:BT020188
IPI:IPI00535860 RefSeq:NP_199234.1 UniGene:At.30087
ProteinModelPortal:Q9FE67 SMR:Q9FE67 IntAct:Q9FE67 STRING:Q9FE67
EnsemblPlants:AT5G44210.1 GeneID:834444 KEGG:ath:AT5G44210
TAIR:At5g44210 eggNOG:NOG249494 InParanoid:Q9FE67 OMA:FACHRER
PhylomeDB:Q9FE67 ProtClustDB:CLSN2916712 Genevestigator:Q9FE67
GermOnline:AT5G44210 Uniprot:Q9FE67
Length = 200
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 47 VKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPW 104
V F+GV + G + A+I R+WLGTF + EAA AYD+AA + RG + NFP
Sbjct: 31 VHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPL 90
Query: 105 T--DTNNQEPNFQNQYSTEAVLNMIRDGTYQ 133
T + + Y + R+ T Q
Sbjct: 91 PGESTTVNDGGENDSYVNRTTVTTAREMTRQ 121
>TAIR|locus:2194819 [details] [associations]
symbol:AT1G44830 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:1900030 "regulation of pectin biosynthetic
process" evidence=IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
ProtClustDB:CLSN2714459 EMBL:AY560839 EMBL:AC020576 EMBL:BT025270
EMBL:AK175503 IPI:IPI00520360 PIR:D96507 RefSeq:NP_175104.1
UniGene:At.50652 ProteinModelPortal:Q9LPE8 SMR:Q9LPE8
EnsemblPlants:AT1G44830.1 GeneID:841047 KEGG:ath:AT1G44830
TAIR:At1g44830 eggNOG:NOG243601 InParanoid:Q9LPE8 OMA:LSESSSW
PhylomeDB:Q9LPE8 Genevestigator:Q9LPE8 GO:GO:1900030 Uniprot:Q9LPE8
Length = 211
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 13 KTNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQIYANHQ--R 70
KT + S S++S+S + RM+ K+KGV + G W ++I A +Q R
Sbjct: 7 KTPKRMSSPSSSSSSSSSTSSSSIRMK--------KYKGVRMRSWGSWVSEIRAPNQKTR 58
Query: 71 IWLGTFKSEREAAMAYDSAAIKIRGGDSHR-NFPWTDTN 108
IWLG++ + AA AYD+A + ++G ++ NFP T+
Sbjct: 59 IWLGSYSTAEAAARAYDAALLCLKGSSANNLNFPEISTS 97
>TAIR|locus:2005493 [details] [associations]
symbol:AP2 "APETALA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;TAS]
[GO:0010093 "specification of floral organ identity" evidence=IMP]
[GO:0048316 "seed development" evidence=IMP] [GO:0010073 "meristem
maintenance" evidence=IMP] [GO:0009888 "tissue development"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA;TAS]
[GO:0048481 "ovule development" evidence=IGI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009908 "flower development" evidence=TAS] [GO:0019953 "sexual
reproduction" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048316
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010093 GO:GO:0048481
EMBL:Z99707 EMBL:AL161590 EMBL:U12546 EMBL:AY128328 IPI:IPI00523209
PIR:A85436 RefSeq:NP_001190938.1 RefSeq:NP_195410.1 UniGene:At.4638
ProteinModelPortal:P47927 SMR:P47927 STRING:P47927
EnsemblPlants:AT4G36920.1 EnsemblPlants:AT4G36920.2 GeneID:829845
KEGG:ath:AT4G36920 TAIR:At4g36920 eggNOG:NOG247476
HOGENOM:HOG000033977 InParanoid:P47927 KO:K09284 OMA:SIYDEEL
PhylomeDB:P47927 ProtClustDB:CLSN2915922 Genevestigator:P47927
GermOnline:AT4G36920 GO:GO:0010073 Uniprot:P47927
Length = 432
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 44/165 (26%), Positives = 77/165 (46%)
Query: 16 ANNTEASDSNNSTSGL-QPA-P-KRMRHDKNVSLVKFKGVV-PQQNGHWGAQIYANHQRI 71
A + A + N + + +PA P K+ R +++GV ++ G W + I+ +++
Sbjct: 96 ATGSSAGKATNVAAAVVEPAQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQV 155
Query: 72 WLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTDTNNQEPNFQNQYSTEAVLNMIRDGT 131
+LG F + AA AYD AAIK RG ++ NF D ++ N E V + R T
Sbjct: 156 YLGGFDTAHAAARAYDRAAIKFRGVEADINFNIDDYDDDLKQMTNLTKEEFVHVLRRQST 215
Query: 132 YQPKFADYLRVQSQREDNNSNASLNQIMVHGDEQFAYRQLFQKEL 176
P+ + R + + A + Q + G +++ Y LF E+
Sbjct: 216 GFPRGSSKYRGVTLHKCGRWEARMGQFL--G-KKYVYLGLFDTEV 257
Score = 115 (45.5 bits), Expect = 0.00066, P = 0.00066
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 48 KFKGVVPQQNGHWGAQI--YANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNF-P- 103
K++GV + G W A++ + + ++LG F +E EAA AYD AAIK G D+ NF P
Sbjct: 223 KYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFDPS 282
Query: 104 -WTDTNNQE----PNFQNQYSTEAVLNMIRDGTYQPKFADY-LRVQSQREDN-NSNASL 155
+ + N E P ++ + L++ + K D LR+ Q++D+ +SN L
Sbjct: 283 IYDEELNAESSGNPTTPQDHNLD--LSLGNSANSKHKSQDMRLRMNQQQQDSLHSNEVL 339
>TAIR|locus:2151576 [details] [associations]
symbol:AT5G61590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB012239 HOGENOM:HOG000272710
EMBL:AY045968 EMBL:AY079321 EMBL:AY085939 IPI:IPI00538118
RefSeq:NP_200967.1 UniGene:At.24138 ProteinModelPortal:Q9FKG2
SMR:Q9FKG2 STRING:Q9FKG2 EnsemblPlants:AT5G61590.1 GeneID:836280
KEGG:ath:AT5G61590 TAIR:At5g61590 eggNOG:NOG268094
InParanoid:Q9FKG2 OMA:TSPEVET PhylomeDB:Q9FKG2
ProtClustDB:CLSN2686928 Genevestigator:Q9FKG2 Uniprot:Q9FKG2
Length = 201
Score = 120 (47.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 32/91 (35%), Positives = 50/91 (54%)
Query: 20 EASDSNNSTSGLQPAPKRMRHDKNVSLVK----FKGVVPQQNGHWGAQIY---ANHQRIW 72
EA S++S++ P + + + K + ++GV + G + A+I RIW
Sbjct: 74 EAESSSSSSTTTSPEVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIW 133
Query: 73 LGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
LGTF+S+ +AA AYD AA K+RG + NFP
Sbjct: 134 LGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164
>TAIR|locus:2155598 [details] [associations]
symbol:TOE3 "target of early activation tagged (EAT) 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009408
"response to heat" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB020742
HOGENOM:HOG000033977 KO:K09284 EMBL:AK176145 EMBL:BT029206
EMBL:AY088238 IPI:IPI00536061 RefSeq:NP_201519.1 UniGene:At.28821
UniGene:At.28822 ProteinModelPortal:Q9FH95 SMR:Q9FH95 PRIDE:Q9FH95
EnsemblPlants:AT5G67180.1 GeneID:836853 KEGG:ath:AT5G67180
TAIR:At5g67180 eggNOG:NOG326403 InParanoid:Q9FH95 OMA:PDHHEES
PhylomeDB:Q9FH95 ProtClustDB:CLSN2916545 Genevestigator:Q9FH95
Uniprot:Q9FH95
Length = 352
Score = 126 (49.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 46/178 (25%), Positives = 80/178 (44%)
Query: 5 ASSMVSNAKTNA-NNTEASDSNNSTSGLQP--AP--KRMRHDKNVSLVKFKGVV-PQQNG 58
A SM + + N+ SD + S +P +P K+ R +++GV ++ G
Sbjct: 48 AQSMEPGVRWSGFNSVGKSDPSGSGRPEEPEISPPIKKSRRGPRSRSSQYRGVTFYRRTG 107
Query: 59 HWGAQIYANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTDTNNQEPNFQNQY 118
W + I+ ++++LG F + AA AYD AAIK RG D+ NF D + N
Sbjct: 108 RWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFDIEDYLDDLKQMGNLT 167
Query: 119 STEAVLNMIRDGTYQPKFADYLRVQSQREDNNSNASLNQIMVHGDEQFAYRQLFQKEL 176
E + + R T P+ + R + + + L Q + ++++ Y LF E+
Sbjct: 168 KEEFMHVLRRQSTGFPRGSSKYRGVTLHKCGRWESRLGQFL---NKKYVYLGLFDTEI 222
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 48 KFKGVVPQQNGHWGAQI--YANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNF 102
K++GV + G W +++ + N + ++LG F +E EAA AYD AAIK G D+ NF
Sbjct: 188 KYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNF 244
>TAIR|locus:2012653 [details] [associations]
symbol:AT1G33760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624 EMBL:AY560838
EMBL:AC010164 EMBL:BT015928 EMBL:BT020566 IPI:IPI00520537
PIR:A86461 RefSeq:NP_174636.1 UniGene:At.39878
ProteinModelPortal:Q9LQ28 SMR:Q9LQ28 EnsemblPlants:AT1G33760.1
GeneID:840267 KEGG:ath:AT1G33760 TAIR:At1g33760 eggNOG:NOG312231
InParanoid:Q9LQ28 OMA:FPRPESS PhylomeDB:Q9LQ28
ProtClustDB:CLSN2914626 Genevestigator:Q9LQ28 Uniprot:Q9LQ28
Length = 184
Score = 118 (46.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 23/63 (36%), Positives = 41/63 (65%)
Query: 43 NVSLVKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHR 100
NV+ + ++G+ ++ G W ++I RIWLG++++ AA AYD+AA+ +RG ++
Sbjct: 14 NVNQLSYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNL 73
Query: 101 NFP 103
NFP
Sbjct: 74 NFP 76
>TAIR|locus:2026301 [details] [associations]
symbol:CRF8 "AT1G71130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016036 "cellular
response to phosphate starvation" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 EMBL:AC016972
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000112390
ProtClustDB:CLSN2687921 EMBL:AK175578 EMBL:AK175683 EMBL:AK175740
EMBL:AK175774 EMBL:AK175931 EMBL:AK176043 EMBL:AK176144
EMBL:AK176280 EMBL:BT025618 EMBL:AY085910 IPI:IPI00531448
PIR:H96735 RefSeq:NP_565012.1 UniGene:At.35227 UniGene:At.74176
ProteinModelPortal:Q9C995 SMR:Q9C995 IntAct:Q9C995
EnsemblPlants:AT1G71130.1 GeneID:843453 KEGG:ath:AT1G71130
TAIR:At1g71130 eggNOG:NOG245226 InParanoid:Q9C995 OMA:RIIRISF
PhylomeDB:Q9C995 Genevestigator:Q9C995 Uniprot:Q9C995
Length = 161
Score = 113 (44.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 48 KFKGVVPQQNGHWGAQIYANH-------QRIWLGTFKSEREAAMAYDSAAIKIRGGDSHR 100
K++GV + G W A+I R+WLGTF + EAA+AYD+A+IK+ G +
Sbjct: 78 KYRGVRQRPWGKWVAEIRCGRGACKGRRDRLWLGTFNTAEEAALAYDNASIKLIGPHAPT 137
Query: 101 NFPWTDTNNQE 111
NF NQE
Sbjct: 138 NFG-LPAENQE 147
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 137 ADYLRVQSQREDNNSNASL----NQIMVHGDEQFAYRQL---FQKELTPSDVGKLNRLVI 189
A +L+V++ ++ + +L Q+++ + +R L F K LT SD +
Sbjct: 84 AIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRPLVNSFTKVLTASDTSAYGGFSV 143
Query: 190 PKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMRPWKFRYCFWRSSQSYVFTRGWN 249
PKK+A++ P + ++ + E++ D W+FR+ + + Q + T GWN
Sbjct: 144 PKKHAIECLPPLD-------MSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWN 196
Query: 250 RFVKEKKLKEKDIITF 265
F+ KKL + D+I F
Sbjct: 197 EFITSKKLVKGDVIVF 212
>TAIR|locus:2176095 [details] [associations]
symbol:ABR1 "ABA REPRESSOR1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0006970 "response to osmotic stress"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0009788 "negative regulation of abscisic acid
mediated signaling pathway" evidence=IMP] [GO:0050832 "defense
response to fungus" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0009873 GO:GO:0050832
GO:GO:0003677 GO:GO:0009749 GO:GO:0003700 GO:GO:0006351
GO:GO:0006970 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB025637
EMBL:AY140092 EMBL:BT008480 IPI:IPI00536757 RefSeq:NP_201280.1
UniGene:At.27199 UniGene:At.71233 HSSP:O80337
ProteinModelPortal:Q9FGF8 SMR:Q9FGF8 STRING:Q9FGF8
EnsemblPlants:AT5G64750.1 GeneID:836596 KEGG:ath:AT5G64750
TAIR:At5g64750 eggNOG:NOG310508 HOGENOM:HOG000006008
InParanoid:Q9FGF8 OMA:SYSEMAR PhylomeDB:Q9FGF8
ProtClustDB:CLSN2914923 Genevestigator:Q9FGF8 GO:GO:0009788
Uniprot:Q9FGF8
Length = 391
Score = 126 (49.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 1 MEEDASSMVSNAKTNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHW 60
+ E +S+M T T A+ S+ ++S P+R +++GV + G W
Sbjct: 147 VREASSNMSGPGPTYEYTTTATASSETSSFSGDQPRR----------RYRGVRQRPWGKW 196
Query: 61 GAQIYANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
A+I + R+WLGTF + AA AYD AA++ RG + NFP
Sbjct: 197 AAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP 241
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 127 (49.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 35/136 (25%), Positives = 64/136 (47%)
Query: 137 ADYLRVQSQREDNNSNASL----NQIMVHGDEQFAYRQL---FQKELTPSDVGKLNRLVI 189
A +L+V++ ++ + +L Q+++ + +R L F K LT SD +
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRPLVNSFTKVLTASDTSAHGGFFV 143
Query: 190 PKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMRPWKFRYCFWRSSQSYVFTRGWN 249
PKK+A++ P + ++ + EL+ D W+F + + + Q ++ T GWN
Sbjct: 144 PKKHAIECLPSLD-------MSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWN 196
Query: 250 RFVKEKKLKEKDIITF 265
F KKL D+I F
Sbjct: 197 AFTTSKKLVAGDVIVF 212
>TAIR|locus:2094897 [details] [associations]
symbol:AT3G16280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB023046
EMBL:AC001645 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
HOGENOM:HOG000237624 EMBL:AY995152 EMBL:AY560846 IPI:IPI00539623
RefSeq:NP_188249.3 UniGene:At.50189 ProteinModelPortal:Q9LU18
SMR:Q9LU18 EnsemblPlants:AT3G16280.1 GeneID:820874
KEGG:ath:AT3G16280 GeneFarm:2905 TAIR:At3g16280 eggNOG:NOG281093
InParanoid:Q9LU18 OMA:LPNIEEG ProtClustDB:CLSN2918820
Genevestigator:Q9LU18 Uniprot:Q9LU18
Length = 236
Score = 120 (47.3 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 4 DASSMVSNAKTNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQ 63
D S + T+ + EA NN+T + ++ ++GV + G W ++
Sbjct: 16 DQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSE 75
Query: 64 IYANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
I + RIWLGTF + AA A+D AA+ I+G + NFP
Sbjct: 76 IRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFP 117
>TAIR|locus:2171514 [details] [associations]
symbol:ERF2 "ethylene responsive element binding factor
2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0009873
"ethylene mediated signaling pathway" evidence=RCA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0009864 "induced systemic resistance,
jasmonic acid mediated signaling pathway" evidence=IMP] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0002679 "respiratory
burst involved in defense response" evidence=RCA] [GO:0009693
"ethylene biosynthetic process" evidence=RCA] [GO:0009723 "response
to ethylene stimulus" evidence=RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0035556 "intracellular
signal transduction" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
EMBL:AB018117 HOGENOM:HOG000239314 EMBL:AB008104 EMBL:AK175151
EMBL:AK175229 EMBL:AK176532 EMBL:AK176606 EMBL:AK176825
EMBL:BT024470 EMBL:AY086983 IPI:IPI00521608 PIR:T51989
RefSeq:NP_199533.1 UniGene:At.19731 ProteinModelPortal:O80338
SMR:O80338 STRING:O80338 PRIDE:O80338 EnsemblPlants:AT5G47220.1
GeneID:834768 KEGG:ath:AT5G47220 TAIR:At5g47220 eggNOG:NOG285540
InParanoid:O80338 KO:K14517 OMA:TPSSCFT PhylomeDB:O80338
ProtClustDB:CLSN2914897 Genevestigator:O80338 GermOnline:AT5G47220
GO:GO:0009864 Uniprot:O80338
Length = 243
Score = 119 (46.9 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 49 FKGVVPQQNGHWGAQIY---ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWT 105
++GV + G + A+I N R+WLGTF++ +AA+AYD AA ++RG + NFP
Sbjct: 117 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLR 176
Query: 106 DTNNQEPN 113
N+ EP+
Sbjct: 177 -VNSGEPD 183
>TAIR|locus:2129116 [details] [associations]
symbol:ERF-1 "ethylene responsive element binding factor
1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IDA] [GO:0005643 "nuclear pore"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 EMBL:Z97343
EMBL:AL161546 EMBL:AY058174 EMBL:AY062533 EMBL:BT002578
EMBL:AB008103 IPI:IPI00518702 PIR:A85196 PIR:T51988
RefSeq:NP_567530.4 UniGene:At.23185 UniGene:At.68141 PDB:1GCC
PDB:2GCC PDB:3GCC PDBsum:1GCC PDBsum:2GCC PDBsum:3GCC
ProteinModelPortal:O80337 SMR:O80337 STRING:O80337
EnsemblPlants:AT4G17500.1 GeneID:827464 KEGG:ath:AT4G17500
TAIR:At4g17500 eggNOG:NOG246525 HOGENOM:HOG000239314
InParanoid:O80337 OMA:PVYCRST PhylomeDB:O80337
ProtClustDB:CLSN2715394 EvolutionaryTrace:O80337
Genevestigator:O80337 GermOnline:AT4G17500 Uniprot:O80337
Length = 268
Score = 120 (47.3 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 49 FKGVVPQQNGHWGAQIY---ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWT 105
++GV + G + A+I N R+WLGTF++ +AA+AYD AA ++RG + NFP
Sbjct: 148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR 207
Query: 106 DTNNQEPN 113
N+ EP+
Sbjct: 208 -VNSGEPD 214
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 125 (49.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 37/136 (27%), Positives = 63/136 (46%)
Query: 137 ADYLRVQSQREDNNSNASL----NQIMVHGDEQFAYRQL---FQKELTPSDVGKLNRLVI 189
A +L+V++ ++ + +L Q+++ + +R L F K LT SD +
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQFRPLVNSFTKVLTASDTSAYGGFFV 143
Query: 190 PKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMRPWKFRYCFWRSSQSYVFTRGWN 249
PKK+A++ P + A EL+ D W+FR+ + + Q + T GWN
Sbjct: 144 PKKHAIECLPPLPLPA-----------QELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWN 192
Query: 250 RFVKEKKLKEKDIITF 265
F KKL + D+I F
Sbjct: 193 EFTTSKKLVKGDVIVF 208
>TAIR|locus:2093166 [details] [associations]
symbol:ABI3 "AT3G24650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0009657 "plastid organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009790 "embryo
development" evidence=IEP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0031930 "mitochondria-nucleus signaling
pathway" evidence=IDA] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA] [GO:0016114 "terpenoid
biosynthetic process" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005829 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:X68141
EMBL:AJ002473 EMBL:AP000740 EMBL:AK220739 EMBL:AK220879
EMBL:AB253328 EMBL:EF597723 EMBL:EF597724 EMBL:EF597725
EMBL:EF597726 EMBL:EF597727 EMBL:EF597728 EMBL:EF597729
EMBL:EF597730 EMBL:EF597731 EMBL:EF597732 EMBL:EF597733
EMBL:EF597734 EMBL:EF597735 EMBL:EF597736 EMBL:EF597737
EMBL:EF597738 EMBL:EF597739 EMBL:EF597740 EMBL:EF597741
EMBL:EF597743 EMBL:EF597744 IPI:IPI00527803 PIR:JQ1676
RefSeq:NP_189108.1 UniGene:At.19959 ProteinModelPortal:Q01593
SMR:Q01593 IntAct:Q01593 STRING:Q01593 EnsemblPlants:AT3G24650.1
GeneID:822061 KEGG:ath:AT3G24650 TAIR:At3g24650 eggNOG:NOG318581
InParanoid:Q01593 OMA:VWNMRYR PhylomeDB:Q01593
ProtClustDB:CLSN2684517 Genevestigator:Q01593 GermOnline:AT3G24650
GO:GO:0009790 GO:GO:0031930 GO:GO:0009657 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Uniprot:Q01593
Length = 720
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 169 RQLFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMRP 228
R L QK L SDVG L R+V+PKK A + P + G I+ ++D+ R
Sbjct: 569 RFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDG---ISLAMEDIGT------SRV 619
Query: 229 WKFRYCFWRSSQSYVFT-RGWNRFVKEKKLKEKDIITFYA 267
W RY FW +++S ++ FVK L+E D I Y+
Sbjct: 620 WNMRYRFWPNNKSRMYLLENTGDFVKTNGLQEGDFIVIYS 659
>TAIR|locus:2194007 [details] [associations]
symbol:ERF73 "ethylene response factor 73" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;IDA] [GO:0034059 "response to
anoxia" evidence=IGI] [GO:0009873 "ethylene mediated signaling
pathway" evidence=IMP;TAS] [GO:0071369 "cellular response to
ethylene stimulus" evidence=IMP] [GO:0071456 "cellular response to
hypoxia" evidence=IEP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0071456 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0034059 UniGene:At.35111 IPI:IPI00541631
RefSeq:NP_001077812.1 UniGene:At.68119 ProteinModelPortal:F4IDA7
SMR:F4IDA7 EnsemblPlants:AT1G72360.2 GeneID:843568
KEGG:ath:AT1G72360 OMA:KKHEPND Uniprot:F4IDA7
Length = 262
Score = 119 (46.9 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 48 KFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
++KG+ + G W A+I R+WLGTF + EAA AYD A +IRG + NFP
Sbjct: 75 RYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFP 132
>TAIR|locus:2014185 [details] [associations]
symbol:AT1G64380 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337
EMBL:AY560876 EMBL:AC066689 EMBL:AK228763 IPI:IPI00537541
PIR:H96667 RefSeq:NP_176620.1 UniGene:At.36008 UniGene:At.67835
ProteinModelPortal:Q9C7W2 SMR:Q9C7W2 EnsemblPlants:AT1G64380.1
GeneID:842745 KEGG:ath:AT1G64380 TAIR:At1g64380 eggNOG:NOG272521
HOGENOM:HOG000241606 InParanoid:Q9C7W2 OMA:CPLERMP PhylomeDB:Q9C7W2
ProtClustDB:CLSN2679299 Genevestigator:Q9C7W2 Uniprot:Q9C7W2
Length = 335
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 49 FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTD 106
++GV + G W A+I N R+WLGT+ + AA AYD AA K+RG + NFP
Sbjct: 136 YRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLK 195
Query: 107 TNNQEPNFQNQYSTEAVLNMIRDGTYQPKFADYLRVQSQREDNNSNASLN 156
++ + A+ N + DG Q + RV+ +R + S N
Sbjct: 196 DPSELLGLGDSSKLIALKNAV-DGKIQ---SICQRVRKERAKKSVKVSKN 241
>TAIR|locus:2116224 [details] [associations]
symbol:RRTF1 "redox responsive transcription factor 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0050832 "defense
response to fungus" evidence=IEP] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] [GO:0035556 "intracellular
signal transduction" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0050832 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
HSSP:O80337 EMBL:AL035521 EMBL:AL161585 EMBL:AY064151 EMBL:AY120700
EMBL:AF325091 IPI:IPI00529364 PIR:T04787 RefSeq:NP_195167.1
UniGene:At.48936 UniGene:At.66607 ProteinModelPortal:Q9SZ06
SMR:Q9SZ06 STRING:Q9SZ06 EnsemblPlants:AT4G34410.1 GeneID:829591
KEGG:ath:AT4G34410 TAIR:At4g34410 eggNOG:NOG290278
HOGENOM:HOG000243182 InParanoid:Q9SZ06 OMA:GNTIADM PhylomeDB:Q9SZ06
ProtClustDB:CLSN2718216 Genevestigator:Q9SZ06 Uniprot:Q9SZ06
Length = 268
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 13 KTNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVK-----FKGVVPQQNGHWGAQIYAN 67
K + E + S+N P K+ + K ++GV + G + A+I
Sbjct: 95 KNHQQEEEITSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDP 154
Query: 68 HQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTD 106
+ R+WLGTF++ +AA AYD AAI RG + NFP+ D
Sbjct: 155 KRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVD 195
>TAIR|locus:2055002 [details] [associations]
symbol:ERF13 "ethylene-responsive element binding factor
13" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0002679 "respiratory
burst involved in defense response" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA;TAS] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=RCA]
[GO:0043069 "negative regulation of programmed cell death"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 EMBL:AC002388 HOGENOM:HOG000239314
EMBL:AF325089 EMBL:AF370540 EMBL:AY072471 EMBL:AY088387
IPI:IPI00525442 PIR:T00409 RefSeq:NP_182011.1 UniGene:At.29014
ProteinModelPortal:Q8L9K1 SMR:Q8L9K1 STRING:Q8L9K1
EnsemblPlants:AT2G44840.1 GeneID:819093 KEGG:ath:AT2G44840
TAIR:At2g44840 eggNOG:NOG314595 InParanoid:Q8L9K1 OMA:EQKRESH
PhylomeDB:Q8L9K1 ProtClustDB:CLSN2913027 Genevestigator:Q8L9K1
GermOnline:AT2G44840 Uniprot:Q8L9K1
Length = 226
Score = 116 (45.9 bits), Expect = 0.00013, P = 0.00013
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 33 PAPKRM-RHDKNVSLVKFKGVVPQQNGHWGAQIY---ANHQRIWLGTFKSEREAAMAYDS 88
PA K H ++++GV + G + A+I N R+WLGT+++ +AA+AYD
Sbjct: 75 PATKASGSHAPRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDR 134
Query: 89 AAIKIRGGDSHRNFP 103
AA ++RG + NFP
Sbjct: 135 AAFQLRGSKAKLNFP 149
>UNIPROTKB|Q6Z1Z3 [details] [associations]
symbol:IDEF1 "B3 domain-containing protein IDEF1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 EMBL:AP008214
EMBL:CM000145 EMBL:AP005406 EMBL:AK107456 EMBL:BR000654
RefSeq:NP_001060757.1 UniGene:Os.13809 STRING:Q6Z1Z3
EnsemblPlants:LOC_Os08g01090.1 GeneID:4344415
KEGG:dosa:Os08t0101000-01 KEGG:osa:4344415 Gramene:Q6Z1Z3
eggNOG:NOG307468 HOGENOM:HOG000070867 OMA:KFIIRGE
ProtClustDB:CLSN2695240 Uniprot:Q6Z1Z3
Length = 362
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 168 YRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMR 227
Y+ + +KELT SDVG + R+V+PKK A P + + + + +DDM L
Sbjct: 249 YQVILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQR---DPLILHMDDMVLPV------ 299
Query: 228 PWKFRYCFWRSSQS--YVFTRGWNRFVKEKKLKEKDIITFY 266
WKF+Y +W +++S Y+ F+K L+ D+I Y
Sbjct: 300 TWKFKYRYWPNNKSRMYILDSA-GEFLKTHGLQAGDVIIIY 339
>TAIR|locus:2155680 [details] [associations]
symbol:AIL7 "AINTEGUMENTA-like 7" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0060771 "phyllotactic
patterning" evidence=IGI] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IGI] [GO:0009887 "organ morphogenesis"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010492 HOGENOM:HOG000239258 KO:K09285 GO:GO:0060771
EMBL:AB026639 EMBL:AY560887 IPI:IPI00522908 RefSeq:NP_201354.5
UniGene:At.50720 ProteinModelPortal:Q6J9N8 SMR:Q6J9N8
EnsemblPlants:AT5G65510.1 GeneID:836677 KEGG:ath:AT5G65510
TAIR:At5g65510 eggNOG:NOG295896 InParanoid:Q6J9N8 OMA:HVVESST
Genevestigator:Q6J9N8 Uniprot:Q6J9N8
Length = 498
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 6 SSMVSNAKTNANNTEASDSNNSTSGLQPAPKRMRHD---KNVSLVKFKGVVPQ-QNGHWG 61
S+ +N ++ + E + N+ T A R + + S+ ++GV Q G W
Sbjct: 290 STATTNFPVSSYSKELEEMNHMTKQEFIASLRRKSSGFSRGASI--YRGVTRHHQQGRWQ 347
Query: 62 AQI--YANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTDTNNQEPNFQNQYS 119
A+I A ++ ++LGTF +E EAA AYD AAIK RG ++ NF N+Y
Sbjct: 348 ARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFE-----------MNRYD 396
Query: 120 TEAVLN 125
EAV+N
Sbjct: 397 IEAVMN 402
>TAIR|locus:2103301 [details] [associations]
symbol:AT3G60490 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL138646 HOGENOM:HOG000237624
EMBL:AY560848 EMBL:BT029458 IPI:IPI00540804 PIR:T47860
RefSeq:NP_191608.1 UniGene:At.34438 ProteinModelPortal:Q9M210
SMR:Q9M210 EnsemblPlants:AT3G60490.1 GeneID:825220
KEGG:ath:AT3G60490 GeneFarm:2902 TAIR:At3g60490 eggNOG:NOG305121
InParanoid:Q9M210 OMA:ESSATHH PhylomeDB:Q9M210
ProtClustDB:CLSN2915626 Genevestigator:Q9M210 Uniprot:Q9M210
Length = 256
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 30/101 (29%), Positives = 55/101 (54%)
Query: 5 ASSMVSNAKTNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQI 64
+SS+V+++ + + ++ S ++ SG + + D N + ++GV + G W ++I
Sbjct: 28 SSSVVTSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDD-NKNPTSYRGVRMRSWGKWVSEI 86
Query: 65 YANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
+ RIWLGT+ + AA A+D AA+ I+G NFP
Sbjct: 87 REPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFP 127
>UNIPROTKB|Q5MFV2 [details] [associations]
symbol:BIERF2 "BTH-induced ERF transcriptional factor 2"
species:39946 "Oryza sativa Indica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AY831393 ProteinModelPortal:Q5MFV2 SMR:Q5MFV2
Gramene:Q5MFV2 Uniprot:Q5MFV2
Length = 235
Score = 116 (45.9 bits), Expect = 0.00014, P = 0.00014
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 49 FKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPW 104
++GV + G + A+I A R+WLGT+ + EAA AYD+AA + RG + NFP+
Sbjct: 34 YRGVRKRPWGRYAAEIRDPAKKSRVWLGTYDTAEEAARAYDAAAREFRGAKAKTNFPF 91
>TAIR|locus:2005490 [details] [associations]
symbol:ABI4 "ABA INSENSITIVE 4" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009747
"hexokinase-dependent signaling" evidence=NAS] [GO:0006970
"response to osmotic stress" evidence=IMP] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IMP] [GO:0009749
"response to glucose stimulus" evidence=IMP] [GO:0010896
"regulation of triglyceride catabolic process" evidence=IMP]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA;TAS]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0005983 "starch catabolic process" evidence=NAS] [GO:0010353
"response to trehalose stimulus" evidence=IMP] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IPI]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0032880 "regulation of protein
localization" evidence=IDA] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0010449 "root meristem growth" evidence=IMP]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0009933
"meristem structural organization" evidence=RCA] [GO:0010162 "seed
dormancy process" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=IEP] [GO:0048316 "seed development" evidence=IMP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 GO:GO:0045893
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0009738
GO:GO:0009873 GO:GO:0009414 GO:GO:0009749 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0032880 GO:GO:0006351
GO:GO:0048527 GO:GO:0010182 GO:GO:0006970 GO:GO:0031930
EMBL:AF040959 EMBL:AF085279 EMBL:AY560890 EMBL:DQ446612
EMBL:DQ653050 IPI:IPI00530730 PIR:G84826 RefSeq:NP_181551.1
UniGene:At.50594 ProteinModelPortal:A0MES8 SMR:A0MES8 STRING:A0MES8
EnsemblPlants:AT2G40220.1 GeneID:818614 KEGG:ath:AT2G40220
TAIR:At2g40220 eggNOG:NOG282672 HOGENOM:HOG000033770
InParanoid:A0MES8 KO:K09286 OMA:STSFHHE PhylomeDB:A0MES8
ProtClustDB:CLSN2913058 Genevestigator:A0MES8 GO:GO:0044212
GO:GO:0010896 GO:GO:0010353 GO:GO:0010449 GO:GO:0048316
GO:GO:0005983 Gene3D:3.30.730.10 SUPFAM:SSF54171 Uniprot:A0MES8
Length = 328
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 11 NAKTNANNTEASDS--NNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQIYANH 68
N +T +N SDS ++STS Q K N S +++GV + G W A+I
Sbjct: 16 NNQTLTHNNPQSDSTTDSSTSSAQRKRKGKGGPDN-SKFRYRGVRQRSWGKWVAEIREPR 74
Query: 69 QRI--WLGTFKSEREAAMAYDSAAIKIRGGDSHRN 101
+R WLGTF + +AA AYD AA+ + G + N
Sbjct: 75 KRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLN 109
>TAIR|locus:2055007 [details] [associations]
symbol:AT2G44940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC002388 HOGENOM:HOG000237624
EMBL:BT008564 EMBL:BT008677 EMBL:AK229616 EMBL:AY087052
IPI:IPI00533012 PIR:T00399 RefSeq:NP_182021.1 UniGene:At.14592
ProteinModelPortal:Q8LBQ7 SMR:Q8LBQ7 EnsemblPlants:AT2G44940.1
GeneID:819103 KEGG:ath:AT2G44940 GeneFarm:2901 TAIR:At2g44940
eggNOG:NOG294541 InParanoid:Q8LBQ7 OMA:DENEMMI PhylomeDB:Q8LBQ7
ProtClustDB:CLSN2913029 Genevestigator:Q8LBQ7 Uniprot:Q8LBQ7
Length = 295
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 1 MEEDASSMVSNAKTNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHW 60
+EED S ++ ++ ++ D ++ G K DK+ + ++GV + G W
Sbjct: 55 IEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPT---YRGVRMRSWGKW 111
Query: 61 GAQIYANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
++I + RIWLGT+ + AA A+D AA+ I+G ++ NFP
Sbjct: 112 VSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFP 156
>TAIR|locus:2063073 [details] [associations]
symbol:DREB2C species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010286 "heat acclimation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009737 "response
to abscisic acid stimulus" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009738 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AF085279 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010286 HOGENOM:HOG000015215 EMBL:AC007020 EMBL:BT026505
EMBL:AY084695 IPI:IPI00546839 PIR:C84828 RefSeq:NP_565929.1
UniGene:At.37068 ProteinModelPortal:Q8LFR2 SMR:Q8LFR2 IntAct:Q8LFR2
STRING:Q8LFR2 EnsemblPlants:AT2G40340.1 GeneID:818627
KEGG:ath:AT2G40340 GeneFarm:3661 TAIR:At2g40340 eggNOG:NOG322546
InParanoid:Q8LFR2 OMA:DESEVCA PhylomeDB:Q8LFR2
ProtClustDB:CLSN2917292 Genevestigator:Q8LFR2 GermOnline:AT2G40340
Uniprot:Q8LFR2
Length = 341
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 39/112 (34%), Positives = 54/112 (48%)
Query: 49 FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTD 106
++GV ++ G W A+I R+WLGTF S EAA+AYD AA I G + N P
Sbjct: 72 YRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDEAAKAIYGQSARLNLPEI- 130
Query: 107 TNNQEPNFQNQYSTEAVLNMIRDGTYQPKFADYLRVQSQREDNNSNASLNQI 158
TN ST A + T F+D V + RED N+++ Q+
Sbjct: 131 TNRSS-------STAATATVSGSVT---AFSDESEVCA-REDTNASSGFGQV 171
>TAIR|locus:2074765 [details] [associations]
symbol:CEJ1 "cooperatively regulated by ethylene and
jasmonate 1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009617 "response to bacterium"
evidence=IEP] [GO:0010941 "regulation of cell death" evidence=IMP]
[GO:0042742 "defense response to bacterium" evidence=IMP]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0009414 "response to water deprivation"
evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0010941 GO:GO:0009873
GO:GO:0003677 GO:GO:0009409 GO:GO:0042742 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
HSSP:O80337 EMBL:AL132976 HOGENOM:HOG000237624
ProtClustDB:CLSN2914757 EMBL:AY045579 EMBL:AY093792 IPI:IPI00543652
PIR:T45572 RefSeq:NP_190595.1 UniGene:At.1423
ProteinModelPortal:Q9SNE1 SMR:Q9SNE1 STRING:Q9SNE1
EnsemblPlants:AT3G50260.1 GeneID:824188 KEGG:ath:AT3G50260
TAIR:At3g50260 eggNOG:NOG306351 InParanoid:Q9SNE1 OMA:PELLPCT
PhylomeDB:Q9SNE1 Genevestigator:Q9SNE1 Uniprot:Q9SNE1
Length = 153
Score = 106 (42.4 bits), Expect = 0.00021, P = 0.00021
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 49 FKGVVPQQNGHWGAQIYANHQR--IWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
FKG+ ++ G W A+I ++R +WLG++ + AA AYD+A +RG + NFP
Sbjct: 21 FKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFP 77
>TAIR|locus:2082732 [details] [associations]
symbol:SMZ "SCHLAFMUTZE" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009658 "chloroplast
organization" evidence=IMP] [GO:0007275 "multicellular organismal
development" evidence=ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL049655 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009658
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AY576275 EMBL:AY560886
EMBL:BT026352 IPI:IPI00547287 IPI:IPI00846149 PIR:T06721
RefSeq:NP_001078290.1 RefSeq:NP_191059.2 UniGene:At.50279
ProteinModelPortal:Q6PV68 SMR:Q6PV68 STRING:Q6PV68
EnsemblPlants:AT3G54990.1 GeneID:824664 KEGG:ath:AT3G54990
TAIR:At3g54990 eggNOG:NOG270704 HOGENOM:HOG000293136
InParanoid:Q6PV68 OMA:DADINFV PhylomeDB:Q6PV68
ProtClustDB:CLSN2681587 ArrayExpress:Q6PV68 Genevestigator:Q6PV68
Uniprot:Q6PV68
Length = 346
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 38/131 (29%), Positives = 62/131 (47%)
Query: 4 DASSMVSNAKTNAN-NTEASDSNNSTS---GLQPAPKRMRHDKNVSLVKFKGVV-PQQNG 58
D +V++A+ N + E S N +S Q K+ R +++GV ++ G
Sbjct: 74 DLFPVVADARRNIEFSVEDSHWLNLSSLQRNTQKMVKKSRRGPRSRSSQYRGVTFYRRTG 133
Query: 59 HWGAQIYANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTDTNNQEPNFQNQY 118
W + I+ ++++LG F + AA AYD AAIK RG D+ NF D + +N
Sbjct: 134 RWESHIWDCGKQVYLGGFDTAYAAARAYDRAAIKFRGLDADINFVVDDYRHDIDKMKNLN 193
Query: 119 STEAVLNMIRD 129
E V + R+
Sbjct: 194 KVEFVQTLRRE 204
>TAIR|locus:2044845 [details] [associations]
symbol:HRD "HARDY" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050832 "defense
response to fungus" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009873 GO:GO:0050832 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC006919 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000237624 EMBL:AY560867 EMBL:DQ446604
EMBL:DQ653045 IPI:IPI00534962 PIR:H84780 RefSeq:NP_181186.1
UniGene:At.64963 ProteinModelPortal:Q9SJR0 SMR:Q9SJR0
EnsemblPlants:AT2G36450.1 GeneID:818219 KEGG:ath:AT2G36450
TAIR:At2g36450 eggNOG:NOG251289 InParanoid:Q9SJR0 OMA:REPRKPN
PhylomeDB:Q9SJR0 ProtClustDB:CLSN2716339 Genevestigator:Q9SJR0
Uniprot:Q9SJR0
Length = 184
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 49 FKGVVPQQNGH-WGAQIYANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
++GV ++N + W ++I + RIWLGTF + AA+AYD AA+ ++G + NFP
Sbjct: 15 YRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFP 72
>TAIR|locus:2159068 [details] [associations]
symbol:LEP "LEAFY PETIOLE" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009739 "response to gibberellin stimulus"
evidence=IMP] [GO:0010030 "positive regulation of seed germination"
evidence=IMP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0010030 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009739 HSSP:O80337
EMBL:AB005230 HOGENOM:HOG000239107 GO:GO:0009740 EMBL:AF216581
EMBL:AY560852 EMBL:BT024919 IPI:IPI00530212 RefSeq:NP_196895.1
UniGene:At.64231 ProteinModelPortal:Q9M644 SMR:Q9M644
EnsemblPlants:AT5G13910.1 GeneID:831238 KEGG:ath:AT5G13910
TAIR:At5g13910 eggNOG:NOG306571 InParanoid:Q9M644 OMA:GSRARTN
PhylomeDB:Q9M644 ProtClustDB:CLSN2916620 Genevestigator:Q9M644
Uniprot:Q9M644
Length = 211
Score = 113 (44.8 bits), Expect = 0.00022, P = 0.00022
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 26 NSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAA 83
N+TS + + + D V +F GV + G + A+I +R WLGTF + EAA
Sbjct: 2 NTTS----SKSKKKQDDQVG-TRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAA 56
Query: 84 MAYDSAAIKIRGGDSHRNFPWTD 106
+AYD AA +RG + NF ++D
Sbjct: 57 LAYDRAARSMRGTRARTNFVYSD 79
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 31/96 (32%), Positives = 50/96 (52%)
Query: 171 LFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMRPWK 230
LF+K L+ SD G++ RLV+PK A YFP IS++ G + L D R W
Sbjct: 294 LFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEG----------IPLKIQDVRGREWT 343
Query: 231 FRYCFWRSSQSYVFT-RGWNRFVKEKKLKEKDIITF 265
F++ +W ++ S ++ G ++ L+ D +TF
Sbjct: 344 FQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDTVTF 379
>UNIPROTKB|Q5MFV1 [details] [associations]
symbol:BIERF3 "BTH-induced ERF transcriptional factor 3"
species:39946 "Oryza sativa Indica Group" [GO:0009620 "response to
fungus" evidence=IC] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009620 EMBL:AY831394
ProteinModelPortal:Q5MFV1 KEGG:dosa:Os02t0654700-01 Gramene:Q5MFV1
Uniprot:Q5MFV1
Length = 303
Score = 116 (45.9 bits), Expect = 0.00027, P = 0.00027
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 49 FKGVVPQQNGHWGAQIY---ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
++GV + G + A+I N R+WLGTF S EAA+AYD AA ++RG + NFP
Sbjct: 149 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFDSAEEAAVAYDRAAYRMRGSRALLNFP 206
>TAIR|locus:2202200 [details] [associations]
symbol:AT1G19210 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC069143 HOGENOM:HOG000237624 EMBL:AF332422
EMBL:BT006191 IPI:IPI00523703 PIR:F86325 RefSeq:NP_173355.3
UniGene:At.17044 ProteinModelPortal:Q84QC2 SMR:Q84QC2
EnsemblPlants:AT1G19210.1 GeneID:838504 KEGG:ath:AT1G19210
TAIR:At1g19210 eggNOG:NOG276412 InParanoid:Q84QC2 OMA:YEIRQES
PhylomeDB:Q84QC2 ProtClustDB:CLSN2918479 Genevestigator:Q84QC2
Uniprot:Q84QC2
Length = 185
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 48 KFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
K+KGV ++ G W ++I + +RIWLG++ + +AA A+D+A +RG ++ NFP
Sbjct: 11 KYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNAKFNFP 68
>TAIR|locus:2032510 [details] [associations]
symbol:ERF12 "ERF domain protein 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000237624 EMBL:AC010155 EMBL:AB055883
EMBL:AY099798 EMBL:BT002604 IPI:IPI00525007 RefSeq:NP_174158.1
UniGene:At.40906 ProteinModelPortal:Q94ID6 SMR:Q94ID6 IntAct:Q94ID6
STRING:Q94ID6 EnsemblPlants:AT1G28360.1 GeneID:839732
KEGG:ath:AT1G28360 TAIR:At1g28360 eggNOG:NOG295943
InParanoid:Q94ID6 OMA:CAREVHY PhylomeDB:Q94ID6
ProtClustDB:CLSN2679392 Genevestigator:Q94ID6 GermOnline:AT1G28360
Uniprot:Q94ID6
Length = 189
Score = 110 (43.8 bits), Expect = 0.00033, P = 0.00033
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 47 VKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
V ++GV + G + A+I R+WLGTF + EAA+AYD AA +RG + NFP
Sbjct: 10 VHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFP 68
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 37/122 (30%), Positives = 56/122 (45%)
Query: 157 QIMVHGDEQFAYRQL---FQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGG 213
++M H R + F K LT SDV L+IPK+YA++ FP + ++
Sbjct: 106 EVMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLD-------MSQP 158
Query: 214 VDDMELVFFDKLMRPWKFRYCFWRSSQSYVFTRG--WNRFVKEKKLKEKDIITFYACECA 271
+ LV D + W F++ F + Q ++FT G W+ F K+L DI E
Sbjct: 159 ISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGE-- 216
Query: 272 NG 273
NG
Sbjct: 217 NG 218
>UNIPROTKB|Q5MFV3 [details] [associations]
symbol:BIERF1 "BTH-induced ERF transcriptional factor 1"
species:39946 "Oryza sativa Indica Group" [GO:0009620 "response to
fungus" evidence=IEP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009620 EMBL:AY831392
ProteinModelPortal:Q5MFV3 SMR:Q5MFV3 Gramene:Q5MFV3 Uniprot:Q5MFV3
Length = 399
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 48 KFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
+++G+ + G W A+I + R+WLGT+ + EAA AYD+ A KIRG + NFP
Sbjct: 138 QYRGIRQRPWGKWAAEIRDPSKGVRVWLGTYNTAEEAARAYDAEARKIRGKKAKVNFP 195
>TAIR|locus:2825329 [details] [associations]
symbol:AT1G71450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC016163 HOGENOM:HOG000237624
EMBL:BT010764 EMBL:BT011790 IPI:IPI00540458 RefSeq:NP_177301.1
UniGene:At.43565 UniGene:At.66830 ProteinModelPortal:Q9C9I2
SMR:Q9C9I2 EnsemblPlants:AT1G71450.1 GeneID:843486
KEGG:ath:AT1G71450 TAIR:At1g71450 eggNOG:NOG312881
InParanoid:Q9C9I2 OMA:DSIRMAV PhylomeDB:Q9C9I2
ProtClustDB:CLSN2914602 Genevestigator:Q9C9I2 Uniprot:Q9C9I2
Length = 183
Score = 109 (43.4 bits), Expect = 0.00038, P = 0.00038
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 49 FKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
++GV ++ G W ++I RIWLG+F++ AA AYD AA RG ++ NFP
Sbjct: 24 YRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFP 80
>TAIR|locus:2058641 [details] [associations]
symbol:DEAR3 "DREB and EAR motif protein 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC002391 HOGENOM:HOG000237624
EMBL:AK118495 EMBL:BT003741 IPI:IPI00528876 PIR:T00498
RefSeq:NP_179915.1 UniGene:At.43320 ProteinModelPortal:O22174
SMR:O22174 EnsemblPlants:AT2G23340.1 GeneID:816866
KEGG:ath:AT2G23340 TAIR:At2g23340 eggNOG:NOG273209
InParanoid:O22174 OMA:LPDPENS PhylomeDB:O22174
ProtClustDB:CLSN2683886 Genevestigator:O22174 Uniprot:O22174
Length = 176
Score = 108 (43.1 bits), Expect = 0.00040, P = 0.00040
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 46 LVKFKGVVPQQNGHWGAQIYANHQR--IWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
L +KG+ ++ G W A+I ++R IWLG++ + AA AYD+A +RG + NFP
Sbjct: 25 LKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFP 84
>TAIR|locus:2144296 [details] [associations]
symbol:TINY2 "AT5G11590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009873
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AL163815 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AY940160 EMBL:AY560851 IPI:IPI00526417 PIR:T48518
RefSeq:NP_196720.1 UniGene:At.50619 ProteinModelPortal:Q9LYD3
SMR:Q9LYD3 EnsemblPlants:AT5G11590.1 GeneID:831031
KEGG:ath:AT5G11590 TAIR:At5g11590 eggNOG:NOG295419
InParanoid:Q9LYD3 OMA:SSEDNYG PhylomeDB:Q9LYD3
ProtClustDB:CLSN2686631 Genevestigator:Q9LYD3 Uniprot:Q9LYD3
Length = 236
Score = 112 (44.5 bits), Expect = 0.00043, P = 0.00043
Identities = 35/108 (32%), Positives = 56/108 (51%)
Query: 1 MEEDASSMVSNAKTN--ANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVK-FKGVVPQQN 57
M E+ S+ S T N+E SDS + S + + K+ + ++ ++GV +
Sbjct: 1 MAEEYYSLRSERVTQLLVPNSE-SDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNW 59
Query: 58 GHWGAQIYANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
G W ++I + RIWLGTF + AA A+D AA+ I+G + NFP
Sbjct: 60 GKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFP 107
>TAIR|locus:2086223 [details] [associations]
symbol:ERF1 "ethylene response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0006952
"defense response" evidence=IMP] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=TAS] [GO:0009873 "ethylene
mediated signaling pathway" evidence=IGI;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006952 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB025608
GO:GO:0009867 HOGENOM:HOG000237624 EMBL:AF076277 EMBL:AF076278
EMBL:AF428390 EMBL:AY133629 EMBL:AY086078 IPI:IPI00537111
RefSeq:NP_188965.1 UniGene:At.6341 UniGene:At.74125
ProteinModelPortal:Q8LDC8 SMR:Q8LDC8 PaxDb:Q8LDC8 PRIDE:Q8LDC8
EnsemblPlants:AT3G23240.1 GeneID:821902 KEGG:ath:AT3G23240
GeneFarm:4728 TAIR:At3g23240 eggNOG:NOG331104 InParanoid:Q8LDC8
KO:K14516 OMA:NDSEEMF PhylomeDB:Q8LDC8 ProtClustDB:CLSN2914712
Genevestigator:Q8LDC8 GermOnline:AT3G23240 Uniprot:Q8LDC8
Length = 218
Score = 111 (44.1 bits), Expect = 0.00044, P = 0.00044
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 49 FKGVVPQQNGHWGAQIY---ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNF 102
++GV + G + A+I N R+WLGTF+S EAA+AYD AA +RG + NF
Sbjct: 82 YRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNF 138
>UNIPROTKB|A4LBC0 [details] [associations]
symbol:LFL1 "B3 domain-containing protein LFL1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908
GO:GO:0048573 EMBL:AP008207 eggNOG:NOG309510 EMBL:EF521182
EMBL:AP003410 EMBL:AK109920 RefSeq:NP_001044053.1 UniGene:Os.8988
GeneID:4325939 KEGG:dosa:Os01t0713600-01 KEGG:osa:4325939
Gramene:A4LBC0 OMA:YKDDENN ProtClustDB:CLSN2691771 Uniprot:A4LBC0
Length = 402
Score = 116 (45.9 bits), Expect = 0.00045, P = 0.00045
Identities = 29/99 (29%), Positives = 52/99 (52%)
Query: 169 RQLFQKELTPSDVGKLNRLVIPKKYAVKYFPFISENAGENAINGGVDDMELVFFDKLMRP 228
R + QKEL SDV +L R+V+PKK A Y P ++ G+ ++ + D++ +
Sbjct: 178 RVILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDGKKSLC--MHDLQNA------QL 229
Query: 229 WKFRYCFWRSSQSYVFT-RGWNRFVKEKKLKEKDIITFY 266
W F+Y +W +++S ++ +V+ L+ D I Y
Sbjct: 230 WTFKYRYWPNNKSRMYVLENTGDYVRTHDLQLGDSIVIY 268
>TAIR|locus:2145249 [details] [associations]
symbol:tny "TINY" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009825 "multidimensional cell growth" evidence=IMP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
ProtClustDB:CLSN2686631 EMBL:AC005405 EMBL:X94698 EMBL:AY560855
EMBL:BT024923 IPI:IPI00548044 PIR:T01076 RefSeq:NP_197953.1
UniGene:At.5373 ProteinModelPortal:Q39127 SMR:Q39127 IntAct:Q39127
STRING:Q39127 EnsemblPlants:AT5G25810.1 GeneID:832650
KEGG:ath:AT5G25810 GeneFarm:3729 TAIR:At5g25810 eggNOG:NOG248116
InParanoid:Q39127 OMA:SWEASAV PhylomeDB:Q39127
Genevestigator:Q39127 Uniprot:Q39127
Length = 218
Score = 110 (43.8 bits), Expect = 0.00057, P = 0.00057
Identities = 30/98 (30%), Positives = 46/98 (46%)
Query: 8 MVSNAKTNANNTEASDSNNSTSGLQPAPKRMRHDKNVSLVKFKGVVPQQNGHWGAQIYAN 67
M+++ T + A N +P +H ++GV + G W ++I
Sbjct: 1 MIASESTKSWEASAVRQENEEEKKKPVKDSGKHPV------YRGVRKRNWGKWVSEIREP 54
Query: 68 HQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
+ RIWLGTF S AA A+D AA+ I+G + NFP
Sbjct: 55 RKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFP 92
>TAIR|locus:2010346 [details] [associations]
symbol:AT1G12890 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC012187 EMBL:AB493454 IPI:IPI00523616
RefSeq:NP_172749.1 UniGene:At.51591 ProteinModelPortal:Q3E703
SMR:Q3E703 EnsemblPlants:AT1G12890.1 GeneID:837847
KEGG:ath:AT1G12890 TAIR:At1g12890 eggNOG:NOG258941
HOGENOM:HOG000215011 InParanoid:Q3E703 OMA:YTENTSL
ProtClustDB:CLSN2914226 Genevestigator:Q3E703 Uniprot:Q3E703
Length = 219
Score = 110 (43.8 bits), Expect = 0.00058, P = 0.00058
Identities = 36/127 (28%), Positives = 66/127 (51%)
Query: 36 KRMRHDKNVSLVKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKI 93
++ + +K + K+ GV + G + A+I +R WLGTF + EAA AYD AA I
Sbjct: 8 RKSKEEKKLQEGKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDVAARSI 67
Query: 94 RGGDSHRNFPWTDTNNQEPNFQNQ---YST--EAVLNMIRDGTYQPKF--ADYLRVQ-SQ 145
G + NF +T+ + E + Q + T + L +++D ++ AD + SQ
Sbjct: 68 SGSLATTNFFYTENTSLERHPQQSLEPHMTWGSSSLCLLQDQPFENNHFVADPISSSFSQ 127
Query: 146 REDNNSN 152
++++++N
Sbjct: 128 KQESSTN 134
>TAIR|locus:2008216 [details] [associations]
symbol:PLT2 "PLETHORA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0048364 "root development" evidence=IGI;IMP] [GO:0051302
"regulation of cell division" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048364 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000239258 KO:K09285 GO:GO:0007389 GO:GO:0019827
eggNOG:NOG311645 GO:GO:0051302 EMBL:AC006085
ProtClustDB:CLSN2680750 EMBL:AY506550 EMBL:AY585681 EMBL:BT020277
EMBL:BT020460 IPI:IPI00543980 PIR:F96549 RefSeq:NP_175530.2
UniGene:At.49968 ProteinModelPortal:Q5YGP7 SMR:Q5YGP7 IntAct:Q5YGP7
STRING:Q5YGP7 EnsemblPlants:AT1G51190.1 GeneID:841542
KEGG:ath:AT1G51190 TAIR:At1g51190 InParanoid:Q5YGP7 OMA:CASNAPN
PhylomeDB:Q5YGP7 Genevestigator:Q5YGP7 Uniprot:Q5YGP7
Length = 568
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 49 FKGVVPQ-QNGHWGAQI--YANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNF 102
++GV Q+G W A+I A ++ ++LGTF +E EAA AYD AAIK RG ++ NF
Sbjct: 293 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNF 349
>TAIR|locus:2091891 [details] [associations]
symbol:PLT1 "PLETHORA 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0048364 "root development" evidence=IGI;IMP] [GO:0051302
"regulation of cell division" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0009734 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000239258 GO:GO:0007389 GO:GO:0019827
GO:GO:0051302 EMBL:AB025629 EMBL:AY506549 EMBL:AY585682
IPI:IPI00534725 RefSeq:NP_188720.2 UniGene:At.38171
ProteinModelPortal:Q5YGP8 SMR:Q5YGP8 EnsemblPlants:AT3G20840.1
GeneID:821632 KEGG:ath:AT3G20840 TAIR:At3g20840 eggNOG:NOG263958
InParanoid:Q5YGP8 OMA:NSSYHEL PhylomeDB:Q5YGP8
ProtClustDB:CLSN2680750 Genevestigator:Q5YGP8 Uniprot:Q5YGP8
Length = 574
Score = 117 (46.2 bits), Expect = 0.00060, P = 0.00060
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 49 FKGVVPQ-QNGHWGAQI--YANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNF 102
++GV Q+G W A+I A ++ ++LGTF +E EAA AYD AAIK RG ++ NF
Sbjct: 284 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNF 340
>TAIR|locus:2092339 [details] [associations]
symbol:ERF7 "ethylene response factor 7" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0006952 GO:GO:0009873
GO:GO:0009414 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB024036
HOGENOM:HOG000237624 ProtClustDB:CLSN2682907 EMBL:AB032201
EMBL:AY037254 EMBL:AY094001 EMBL:AY085023 EMBL:AK228460
IPI:IPI00537654 RefSeq:NP_188666.1 UniGene:At.20161
ProteinModelPortal:Q9LDE4 SMR:Q9LDE4 IntAct:Q9LDE4 STRING:Q9LDE4
PaxDb:Q9LDE4 PRIDE:Q9LDE4 EnsemblPlants:AT3G20310.1 GeneID:821575
KEGG:ath:AT3G20310 TAIR:At3g20310 eggNOG:NOG322216
InParanoid:Q9LDE4 OMA:VAPEDCH PhylomeDB:Q9LDE4
Genevestigator:Q9LDE4 GermOnline:AT3G20310 Uniprot:Q9LDE4
Length = 244
Score = 111 (44.1 bits), Expect = 0.00061, P = 0.00061
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 48 KFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWT 105
+++GV + G + A+I R+WLGTF S +AA AYD+AA +RG + NFP
Sbjct: 26 RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFP-I 84
Query: 106 DTNNQEP 112
D + P
Sbjct: 85 DCSPSSP 91
>TAIR|locus:2076720 [details] [associations]
symbol:CRF6 "AT3G61630" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0042991 "transcription factor import
into nucleus" evidence=RCA;IDA] [GO:0048366 "leaf development"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736 GO:GO:0048366
EMBL:AL132959 GO:GO:0048825 GO:GO:0042991 HOGENOM:HOG000237664
ProtClustDB:CLSN2683458 EMBL:BX822244 IPI:IPI00528170 PIR:T47955
RefSeq:NP_191722.1 UniGene:At.34258 ProteinModelPortal:Q9M374
SMR:Q9M374 IntAct:Q9M374 STRING:Q9M374 EnsemblPlants:AT3G61630.1
GeneID:825336 KEGG:ath:AT3G61630 TAIR:At3g61630 eggNOG:NOG296971
InParanoid:Q9M374 OMA:HINEIRI PhylomeDB:Q9M374
Genevestigator:Q9M374 Uniprot:Q9M374
Length = 315
Score = 113 (44.8 bits), Expect = 0.00063, P = 0.00063
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 48 KFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNF--P 103
K++GV + G + A+I ++ RIWLGTF + EAA+AYD AAI ++G + NF P
Sbjct: 104 KYRGVRQRPWGKFAAEIRDPSSRTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTP 163
Query: 104 WTDT 107
T T
Sbjct: 164 PTPT 167
>UNIPROTKB|Q5MFV0 [details] [associations]
symbol:BIERF4 "BTH-induced ERF transcriptional factor 4"
species:39946 "Oryza sativa Indica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IC] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AY831395 ProteinModelPortal:Q5MFV0
KEGG:dosa:Os03t0183300-01 Gramene:Q5MFV0 Uniprot:Q5MFV0
Length = 329
Score = 114 (45.2 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 48 KFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWT 105
+++GV + G W A+I R+WLGTF + AA+AYD AA IRG + NFP
Sbjct: 96 QYRGVRRRPWGKWAAEIRDPVKGIRVWLGTFTNAEAAALAYDDAARAIRGDRAKLNFPSA 155
Query: 106 DT 107
T
Sbjct: 156 TT 157
Score = 37 (18.1 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 194 AVKYFPFISENAGENAI 210
++KY P SE++ NA+
Sbjct: 197 SIKYEPETSESSESNAL 213
>TAIR|locus:2115005 [details] [associations]
symbol:RAP2.10 "related to AP2 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:Z99707 EMBL:AL161590
HOGENOM:HOG000237624 ProtClustDB:CLSN2683886 EMBL:AF003103
EMBL:AJ002598 EMBL:AY057683 EMBL:BT020317 EMBL:BT020302
EMBL:BT025757 IPI:IPI00532035 PIR:G85435 PIR:T52619
RefSeq:NP_195408.1 UniGene:At.461 ProteinModelPortal:Q9SW63
SMR:Q9SW63 EnsemblPlants:AT4G36900.1 GeneID:829843
KEGG:ath:AT4G36900 TAIR:At4g36900 eggNOG:NOG321299
InParanoid:Q9SW63 OMA:ECSSKEG PhylomeDB:Q9SW63
Genevestigator:Q9SW63 Uniprot:Q9SW63
Length = 196
Score = 108 (43.1 bits), Expect = 0.00068, P = 0.00068
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 49 FKGVVPQQNGHWGAQIYANHQR--IWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
+KG+ ++ G W A+I ++R IWLG++ + AA AYD+A +RG + NFP
Sbjct: 30 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFP 86
>TAIR|locus:2031890 [details] [associations]
symbol:ESR1 "ENHANCER OF SHOOT REGENERATION 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009735
"response to cytokinin stimulus" evidence=IEP] [GO:0009887 "organ
morphogenesis" evidence=IMP] [GO:0010084 "specification of organ
axis polarity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005634 GO:GO:0009735 GO:GO:0009734 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736 EMBL:AC007357
GO:GO:0009880 GO:GO:0048825 GO:GO:0010084 EMBL:AF353577
IPI:IPI00546326 PIR:G86263 RefSeq:NP_172758.1 UniGene:At.28308
ProteinModelPortal:Q9SAD4 SMR:Q9SAD4 IntAct:Q9SAD4 STRING:Q9SAD4
EnsemblPlants:AT1G12980.1 GeneID:837856 KEGG:ath:AT1G12980
TAIR:At1g12980 eggNOG:NOG305471 HOGENOM:HOG000112399
InParanoid:Q9SAD4 OMA:CAYDSAA ProtClustDB:CLSN2914228
Genevestigator:Q9SAD4 Uniprot:Q9SAD4
Length = 328
Score = 113 (44.8 bits), Expect = 0.00069, P = 0.00069
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 45 SLVKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNF 102
S +++GV + G + A+I + +R WLGTF + +AA AYDSAA RG + NF
Sbjct: 53 STTRYRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTNF 112
Query: 103 PW-TDTNNQEPNF 114
+ T EP F
Sbjct: 113 TYPTAVIMPEPRF 125
>TAIR|locus:2126619 [details] [associations]
symbol:AT4G31060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AL022198 EMBL:AL161578 EMBL:AY560884 EMBL:BT011774
EMBL:BT012399 IPI:IPI00530702 PIR:G85363 RefSeq:NP_567867.1
UniGene:At.31779 UniGene:At.74201 ProteinModelPortal:Q6NLD5
SMR:Q6NLD5 EnsemblPlants:AT4G31060.1 GeneID:829233
KEGG:ath:AT4G31060 TAIR:At4g31060 eggNOG:NOG279537
HOGENOM:HOG000097077 InParanoid:Q6NLD5 OMA:MDIDWIN PhylomeDB:Q6NLD5
ProtClustDB:CLSN2689698 Genevestigator:Q6NLD5 Uniprot:Q6NLD5
Length = 187
Score = 107 (42.7 bits), Expect = 0.00073, P = 0.00073
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 49 FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWTD 106
++GV + G W ++I +RIWLG++ + +AA AYD+A IRG NFP TD
Sbjct: 27 YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFP-TD 85
Query: 107 TNNQEP 112
Q P
Sbjct: 86 KKPQLP 91
>TAIR|locus:2176187 [details] [associations]
symbol:AT5G51190 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009612 "response to mechanical stimulus"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 HSSP:O80337 EMBL:AB023044 HOGENOM:HOG000272710
EMBL:AY072345 EMBL:AY114590 EMBL:AY086290 IPI:IPI00545838
RefSeq:NP_568755.1 UniGene:At.19728 ProteinModelPortal:Q8VY90
SMR:Q8VY90 STRING:Q8VY90 PaxDb:Q8VY90 EnsemblPlants:AT5G51190.1
GeneID:835193 KEGG:ath:AT5G51190 TAIR:At5g51190 eggNOG:NOG301109
InParanoid:Q8VY90 OMA:PLEAGKH PhylomeDB:Q8VY90
ProtClustDB:CLSN2917752 Genevestigator:Q8VY90 Uniprot:Q8VY90
Length = 221
Score = 109 (43.4 bits), Expect = 0.00079, P = 0.00079
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 49 FKGVVPQQNGHWGAQIYANHQ---RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
++GV + G + A+I ++ R+WLGTF + EAA YD AA K+RG + NFP
Sbjct: 72 YRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129
>TAIR|locus:2030265 [details] [associations]
symbol:AT1G72570 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
EMBL:AY603417 EMBL:AC010926 EMBL:DQ446422 EMBL:DQ652930
IPI:IPI00529030 PIR:B96750 RefSeq:NP_177401.2 UniGene:At.50661
ProteinModelPortal:Q1PFE1 SMR:Q1PFE1 EnsemblPlants:AT1G72570.1
GeneID:843589 KEGG:ath:AT1G72570 TAIR:At1g72570 eggNOG:NOG295761
HOGENOM:HOG000239258 InParanoid:Q1PFE1 KO:K09285 OMA:TPPLRIC
PhylomeDB:Q1PFE1 ProtClustDB:CLSN2920249 Genevestigator:Q1PFE1
Uniprot:Q1PFE1
Length = 415
Score = 114 (45.2 bits), Expect = 0.00080, P = 0.00080
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 49 FKGVVPQ-QNGHWGAQI--YANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNF 102
++GV Q+G W A+I A ++ ++LGTF ++ EAA AYD AAIK RG ++ NF
Sbjct: 326 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNF 382
>TAIR|locus:2146985 [details] [associations]
symbol:ESE3 "ethylene and salt inducible 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009740 "gibberellic acid
mediated signaling pathway" evidence=RCA] [GO:0010162 "seed
dormancy process" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006259
HOGENOM:HOG000237624 EMBL:AY045659 EMBL:AY059664 IPI:IPI00523095
RefSeq:NP_197901.1 UniGene:At.26169 ProteinModelPortal:Q94AW5
SMR:Q94AW5 EnsemblPlants:AT5G25190.1 GeneID:832590
KEGG:ath:AT5G25190 TAIR:At5g25190 eggNOG:NOG283264
InParanoid:Q94AW5 OMA:IMCGPRA PhylomeDB:Q94AW5
ProtClustDB:CLSN2686531 Genevestigator:Q94AW5 Uniprot:Q94AW5
Length = 181
Score = 106 (42.4 bits), Expect = 0.00085, P = 0.00085
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 48 KFKGVVPQQNGHWGAQIYAN--HQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPW 104
+F+GV + G W ++I RIWLGTF++ +AA AYD AA + G + NFP+
Sbjct: 7 RFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
>TAIR|locus:2825842 [details] [associations]
symbol:RAP2.1 "related to AP2 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009873
GO:GO:0003677 GO:GO:0009409 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC083835 HOGENOM:HOG000237624 EMBL:BT024691
EMBL:AY086838 EMBL:Z27045 EMBL:AF003094 IPI:IPI00543804 PIR:H96511
RefSeq:NP_564496.1 UniGene:At.28676 ProteinModelPortal:Q8LC30
SMR:Q8LC30 PaxDb:Q8LC30 PRIDE:Q8LC30 EnsemblPlants:AT1G46768.1
GeneID:841117 KEGG:ath:AT1G46768 TAIR:At1g46768 eggNOG:NOG284485
InParanoid:Q8LC30 OMA:QEESTMR PhylomeDB:Q8LC30
ProtClustDB:CLSN2917164 Genevestigator:Q8LC30 Uniprot:Q8LC30
Length = 153
Score = 102 (41.0 bits), Expect = 0.00088, P = 0.00088
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 23 DSNNSTSGLQPAPKRMRHDKNVSLVK-FKGVVPQQNGHWGAQIYANHQR--IWLGTFKSE 79
+ ST + P + +V+ K ++G+ ++ G W A+I ++R +WLG++ ++
Sbjct: 4 EQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTD 63
Query: 80 REAAMAYDSAAIKIRGGDSHRNFP 103
AA AYD A +RG + NFP
Sbjct: 64 IAAARAYDVAVFYLRGPSARLNFP 87
>TAIR|locus:2153504 [details] [associations]
symbol:DREB2A "AT5G05410" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IMP;TAS] [GO:0010224 "response to UV-B" evidence=IEP;IGI]
[GO:0010286 "heat acclimation" evidence=IEP;RCA] [GO:0009408
"response to heat" evidence=IMP] [GO:0042542 "response to hydrogen
peroxide" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006457 "protein folding" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0042542 GO:GO:0010224
EMBL:AB010692 GO:GO:0010286 EMBL:AB007790 EMBL:AB016570
EMBL:AY063972 EMBL:AY691903 IPI:IPI00537633 PIR:T51833
RefSeq:NP_196160.1 UniGene:At.25247 ProteinModelPortal:O82132
SMR:O82132 IntAct:O82132 STRING:O82132 EnsemblPlants:AT5G05410.1
GeneID:830424 KEGG:ath:AT5G05410 GeneFarm:3658 TAIR:At5g05410
eggNOG:NOG283761 HOGENOM:HOG000015215 InParanoid:O82132 OMA:EVCTVET
PhylomeDB:O82132 ProtClustDB:CLSN2684051 Genevestigator:O82132
GermOnline:AT5G05410 Uniprot:O82132
Length = 335
Score = 112 (44.5 bits), Expect = 0.00093, P = 0.00093
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 45 SLVKFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNF 102
S F+GV + G W A+I ++ R+WLGTF + +EAA AYD AA + G + NF
Sbjct: 75 SRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNF 134
Query: 103 PWTDTN 108
P +D +
Sbjct: 135 PRSDAS 140
>TAIR|locus:2137559 [details] [associations]
symbol:ANT "AINTEGUMENTA" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0042127 "regulation of
cell proliferation" evidence=RCA;IMP] [GO:0010492 "maintenance of
shoot apical meristem identity" evidence=IGI] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=IMP;RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709 EMBL:AL161592
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0042127
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009908 GO:GO:0010492
HOGENOM:HOG000239258 KO:K09285 EMBL:U40256 EMBL:U41339 EMBL:U44028
EMBL:AR316367 EMBL:AY080706 EMBL:AY117207 IPI:IPI00532315
PIR:S71365 RefSeq:NP_195489.1 UniGene:At.1556
ProteinModelPortal:Q38914 SMR:Q38914 STRING:Q38914 PaxDb:Q38914
PRIDE:Q38914 EnsemblPlants:AT4G37750.1 GeneID:829931
KEGG:ath:AT4G37750 GeneFarm:5116 TAIR:At4g37750 eggNOG:NOG313785
InParanoid:Q38914 OMA:NTTHEPN PhylomeDB:Q38914
ProtClustDB:CLSN2916050 Genevestigator:Q38914 GermOnline:AT4G37750
Uniprot:Q38914
Length = 555
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 49 FKGVVPQ-QNGHWGAQI--YANHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFPWT 105
++GV Q+G W A+I A ++ ++LGTF ++ EAA AYD AAIK RG ++ NF T
Sbjct: 386 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDVAAIKFRGTNAVTNFDIT 445
>TAIR|locus:504956445 [details] [associations]
symbol:AT5G21960 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC140977 EMBL:AL589883
HOGENOM:HOG000237624 EMBL:AY560866 EMBL:BT011577 EMBL:BT012243
IPI:IPI00534105 RefSeq:NP_680184.1 UniGene:At.45636
ProteinModelPortal:Q9C591 SMR:Q9C591 EnsemblPlants:AT5G21960.1
GeneID:832256 KEGG:ath:AT5G21960 TAIR:At5g21960 eggNOG:NOG289112
InParanoid:Q9C591 OMA:RFACEEE PhylomeDB:Q9C591
ProtClustDB:CLSN2917830 Genevestigator:Q9C591 Uniprot:Q9C591
Length = 216
Score = 108 (43.1 bits), Expect = 0.00096, P = 0.00096
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 48 KFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEREAAMAYDSAAIKIRGGDSHRNFP 103
K+ GV ++ G W A+I + RIWLG+F S +AA A+D+A +RG + NFP
Sbjct: 6 KYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFP 63
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 332 322 0.00085 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 123
No. of states in DFA: 610 (65 KB)
Total size of DFA: 241 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.47u 0.11s 28.58t Elapsed: 00:00:02
Total cpu time: 28.48u 0.11s 28.59t Elapsed: 00:00:02
Start: Fri May 10 06:01:17 2013 End: Fri May 10 06:01:19 2013
WARNINGS ISSUED: 1