Your job contains 1 sequence.
>046899
MKEGRKGMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRH
AVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLE
SPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNA
DIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDK
SSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIH
GRLLVCLTMVKVLEIWRMIDLIYRPEEEVLAELDKFKSHIFGCDKSC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046899
(407 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2134408 - symbol:NFC5 "AT4G29730" species:3702... 821 1.4e-103 2
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 817 2.0e-81 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 356 4.6e-42 2
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 353 7.5e-42 2
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 353 9.5e-42 2
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 351 1.5e-41 2
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 351 1.5e-41 2
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 351 1.5e-41 2
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 351 1.5e-41 2
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 351 1.5e-41 2
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 351 1.5e-41 2
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 351 1.5e-41 2
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 351 5.2e-41 2
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 345 5.2e-41 2
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 344 8.4e-41 2
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 347 1.1e-40 2
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 343 1.7e-40 2
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 344 2.2e-40 2
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 347 2.8e-40 2
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 341 2.8e-40 2
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 341 2.8e-40 2
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 341 2.8e-40 2
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 341 2.8e-40 2
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 341 2.8e-40 2
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 341 2.8e-40 2
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 341 2.8e-40 2
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 341 2.8e-40 2
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 279 1.6e-39 3
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 318 1.9e-39 2
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 328 6.5e-39 2
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 328 1.3e-38 2
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 319 2.2e-38 2
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 319 2.2e-38 2
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 305 5.1e-37 2
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 313 2.2e-36 2
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 351 3.5e-36 2
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 383 1.9e-35 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 383 1.9e-35 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 248 4.2e-26 2
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 239 2.1e-24 2
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 238 5.4e-24 2
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 279 2.4e-23 2
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 284 3.3e-23 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 189 1.2e-22 3
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 239 8.7e-20 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 245 2.1e-18 1
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 241 3.0e-18 2
ASPGD|ASPL0000017699 - symbol:AN8187 species:162425 "Emer... 181 3.6e-18 3
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 222 7.0e-18 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 190 4.2e-17 2
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 140 4.7e-16 3
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 225 4.8e-16 1
CGD|CAL0005992 - symbol:orf19.3581 species:5476 "Candida ... 171 8.7e-16 2
CGD|CAL0005349 - symbol:HAT2 species:5476 "Candida albica... 181 7.6e-15 2
UNIPROTKB|Q59RH5 - symbol:HAT2 "Histone acetyltransferase... 181 7.6e-15 2
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 210 2.4e-14 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 210 2.4e-14 1
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 209 3.3e-14 1
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 207 5.1e-14 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 205 9.1e-14 1
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 204 1.2e-13 1
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 203 1.5e-13 1
UNIPROTKB|K7GKX8 - symbol:LOC100519001 "Uncharacterized p... 110 1.9e-11 3
GENEDB_PFALCIPARUM|PFA0520c - symbol:PFA0520c "chromatin ... 111 2.9e-11 3
UNIPROTKB|Q8I238 - symbol:PFA_0520c "Chromatin assembly f... 111 2.9e-11 3
GENEDB_PFALCIPARUM|PF14_0314 - symbol:PF14_0314 "chromati... 140 5.0e-11 3
UNIPROTKB|Q8ILD0 - symbol:PF14_0314 "Chromatin assembly f... 140 5.0e-11 3
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 184 5.8e-11 2
CGD|CAL0003130 - symbol:orf19.7185 species:5476 "Candida ... 147 8.6e-11 2
UNIPROTKB|Q5A0B0 - symbol:CaO19.7185 "Putative uncharacte... 147 8.6e-11 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 170 3.2e-10 1
SGD|S000004738 - symbol:RRB1 "Nuclear protein involved in... 168 3.4e-10 2
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 170 3.4e-10 1
POMBASE|SPAC25H1.06 - symbol:pcf3 "CAF assembly factor (C... 87 4.0e-10 4
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 169 4.5e-10 1
FB|FBgn0035922 - symbol:Pex7 "Peroxin 7" species:7227 "Dr... 168 6.9e-10 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 167 7.7e-10 1
CGD|CAL0001341 - symbol:orf19.6355 species:5476 "Candida ... 163 8.1e-10 2
UNIPROTKB|Q59PD8 - symbol:RRB1 "Likely nucleolar ribosome... 163 8.1e-10 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 167 8.5e-10 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 166 9.5e-10 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 166 1.0e-09 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 171 1.0e-09 1
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 165 1.2e-09 1
UNIPROTKB|Q5JKX0 - symbol:B1147A04.35 "cDNA clone:J013000... 169 1.4e-09 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 163 2.1e-09 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 163 2.1e-09 1
UNIPROTKB|P93397 - symbol:P93397 "Guanine nucleotide-bind... 152 2.7e-09 2
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 161 4.1e-09 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 162 6.0e-09 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 159 8.7e-09 1
UNIPROTKB|Q9NYS7 - symbol:WSB2 "WD repeat and SOCS box-co... 159 1.1e-08 1
UNIPROTKB|F5H280 - symbol:WSB2 "WD repeat and SOCS box-co... 159 1.1e-08 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 156 1.2e-08 1
UNIPROTKB|B4DIE6 - symbol:WSB2 "cDNA FLJ59692, highly sim... 159 1.2e-08 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 162 1.3e-08 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 160 1.3e-08 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 156 1.5e-08 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 156 1.5e-08 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 156 1.5e-08 1
WARNING: Descriptions of 415 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 821 (294.1 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 169/324 (52%), Positives = 218/324 (67%)
Query: 93 PQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDL-----DQSVVLWSIQDHVSA 147
P ++ PD+L+ + Q + L + P + D+SV+LW+IQDH++
Sbjct: 178 PDRYAVLGAPDSRPDLLL--IGHQDDAEFALAMCPTEPFVLSGGKDKSVILWNIQDHITM 235
Query: 148 LAAE---PGSA-KSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFC 203
++ PGS+ K T G + K+GG PS+G RG Y GH+DTVEDV FC
Sbjct: 236 AGSDSKSPGSSFKQTGEG------SDKTGG--------PSVGPRGIYNGHKDTVEDVAFC 281
Query: 204 PSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNS 263
PSSAQEFCSVGDDSCL+LWDAR+G++PA+KVEKAH+AD+HCVDWNPHD NLILTGSADN+
Sbjct: 282 PSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNT 341
Query: 264 IHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGE 323
+ +FDRR LTS+GVGSP++KFEGH AAVLCVQWSPDKSSVFGSSAEDG+LNIWD +++G+
Sbjct: 342 VRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGK 401
Query: 324 KQDYGELKYP----IIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTMVKVLEIWRMI 379
K + K P H + ++D LL + + + L+IWRM
Sbjct: 402 KSERAT-KTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDNC-ESIGGGGTLQIWRMS 459
Query: 380 DLIYRPEEEVLAELDKFKSHIFGC 403
DLIYRPE+EVL EL+KFKSH+F C
Sbjct: 460 DLIYRPEDEVLTELEKFKSHVFTC 483
Score = 312 (114.9 bits), Expect = 2.2e-49, Sum P(2) = 2.2e-49
Identities = 67/103 (65%), Positives = 77/103 (74%)
Query: 61 LSEQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRH 120
++ Q NE+A SPFVKK+KTIIHPGEVNRIRELPQNSKIVATHTDSPD+LIW+ E QP+R+
Sbjct: 122 VNRQLNEKAHSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRY 181
Query: 121 AVLGAADSHPDLDQSVVLWSIQDHVS-ALAAEPGSAKSTASGG 162
AVLGA DS PDL +L QD ALA P + SGG
Sbjct: 182 AVLGAPDSRPDL----LLIGHQDDAEFALAMCP-TEPFVLSGG 219
Score = 225 (84.3 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 5 RKGMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQ 64
++ + +VDD Y+QWK+L+P+LYD NH LVWPSLSCRWGPQLEQA K QRLYLSEQ
Sbjct: 47 QQSQKATVDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSKT-QRLYLSEQ 105
Query: 65 FN 66
N
Sbjct: 106 TN 107
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 169/322 (52%), Positives = 211/322 (65%)
Query: 93 PQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDL-----DQSVVLWSIQDHVSA 147
P ++ PD+++ Q N L + P + D+SVVLWSIQDH++
Sbjct: 198 PNRHAVLGAANSRPDLIL--TGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITT 255
Query: 148 LAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSA 207
+ + S +SG + K G G ESP++G RG Y GHEDTVEDV F P+SA
Sbjct: 256 IGTD-----SKSSG-----SIIKQTGEGTDKNESPTVGPRGVYHGHEDTVEDVAFSPTSA 305
Query: 208 QEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMF 267
QEFCSVGDDSCLILWDAR+G+ P KVEKAH+AD+HCVDWNPHD NLILTGSADN++ +F
Sbjct: 306 QEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLF 365
Query: 268 DRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDY 327
DRRKLT++GVGSPI+KFEGH AAVLCVQWSPDKSSVFGSSAEDG+LNIWD++++ +K D
Sbjct: 366 DRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDR 425
Query: 328 GELKYP----IIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTMVK--VLEIWRMIDL 381
K P H + ++D + + C T L+IWRM DL
Sbjct: 426 AA-KSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDD---CETTGGGGTLQIWRMSDL 481
Query: 382 IYRPEEEVLAELDKFKSHIFGC 403
IYRPEEEV+AEL+KFKSH+ C
Sbjct: 482 IYRPEEEVVAELEKFKSHVMTC 503
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 75/100 (75%), Positives = 80/100 (80%)
Query: 64 QFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL 123
QFNEEARSPFVKK+KTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVE QPNRHAVL
Sbjct: 145 QFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVL 204
Query: 124 GAADSHPDLDQSVVLWSIQDHVS-ALAAEPGSAKSTASGG 162
GAA+S PDL +L QD+ ALA P + SGG
Sbjct: 205 GAANSRPDL----ILTGHQDNAEFALAMCP-TEPFVLSGG 239
Score = 297 (109.6 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 70/162 (43%), Positives = 92/162 (56%)
Query: 1 MKE-GRKGMER-SVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQR 58
MKE G+K + SVD++Y+QWK LVP+LYDWLANHNLVWPSLSCRWGPQLEQATYKNRQR
Sbjct: 51 MKESGKKTQQSPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQR 110
Query: 59 LYLSEQFNEEARSPFVKKFKTIIHPGEVNRIRELPQ-NSKIVATHTDSPDVLIWDVEAQP 117
LYLSEQ + + V ++ P V + Q N + + +I E
Sbjct: 111 LYLSEQTDGSVPNTLVIANCEVVKP-RVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNR 169
Query: 118 NRHAVLGA--ADSHPDLDQSVVLWSIQDHVSALAAEPGSAKS 157
R + +H D V++W ++ + A G+A S
Sbjct: 170 IRELPQNSKIVATHTD-SPDVLIWDVETQPNRHAVL-GAANS 209
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 356 (130.4 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 101/328 (30%), Positives = 161/328 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T + DVL++D P++ G + PDL L
Sbjct: 121 INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSG--ECTPDLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGCLLS--ASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE-EVLAELDKFKS 398
++++W+M + IY E+ E A+ +K+ S
Sbjct: 398 IMQVWQMAENIYNDEDPEGAADTEKYNS 425
Score = 106 (42.4 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTS 73
Query: 67 EE 68
+E
Sbjct: 74 DE 75
Score = 84 (34.6 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 30/149 (20%), Positives = 65/149 (43%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H +++ + P + +I T + + + +FD K S D G +P + GH
Sbjct: 117 IEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD + ++ + K I +
Sbjct: 177 QKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAK--TIFTGH-------- 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 353 (129.3 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 99/316 (31%), Positives = 154/316 (48%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T + DVL +D P++ G D PDL L
Sbjct: 121 INHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSG--DCSPDLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLS--ASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY EE
Sbjct: 398 IMQVWQMAENIYNDEE 413
Score = 107 (42.7 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTS 72
Query: 67 EE 68
+E
Sbjct: 73 DE 74
Score = 81 (33.6 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 31/149 (20%), Positives = 65/149 (43%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H +++ + P + +I T + + + FD K S D G SP + GH
Sbjct: 117 IEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD G ++ G++ + +
Sbjct: 177 QKEGYGLSWNPNLSGNLLSASDDHTICLWDIS--GAPKE-GKI-------VDAKTIFTGH 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 353 (129.3 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 98/316 (31%), Positives = 156/316 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G + +PDL L
Sbjct: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLS--ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY E+
Sbjct: 398 IMQVWQMAENIYNDED 413
Score = 106 (42.4 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTS 73
Query: 67 EE 68
+E
Sbjct: 74 DE 75
Score = 83 (34.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 30/149 (20%), Positives = 65/149 (43%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H +++ + P + +I T + + + +FD K S D G +P + GH
Sbjct: 117 IEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD + ++ + K I +
Sbjct: 177 QKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAK--TIFTGH-------- 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 351 (128.6 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 98/316 (31%), Positives = 155/316 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G + +PDL L
Sbjct: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLS--ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY E+
Sbjct: 398 IMQVWQMAENIYNDED 413
Score = 106 (42.4 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 67 EE 68
+E
Sbjct: 74 DE 75
Score = 83 (34.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 30/149 (20%), Positives = 65/149 (43%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H +++ + P + +I T + + + +FD K S D G +P + GH
Sbjct: 117 IEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD + ++ + K I +
Sbjct: 177 QKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK--TIFTGH-------- 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 351 (128.6 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 98/316 (31%), Positives = 155/316 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G + +PDL L
Sbjct: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLS--ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY E+
Sbjct: 398 IMQVWQMAENIYNDED 413
Score = 106 (42.4 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 67 EE 68
+E
Sbjct: 74 DE 75
Score = 83 (34.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 30/149 (20%), Positives = 65/149 (43%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H +++ + P + +I T + + + +FD K S D G +P + GH
Sbjct: 117 IEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD + ++ + K I +
Sbjct: 177 QKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK--TIFTGH-------- 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 351 (128.6 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 98/316 (31%), Positives = 155/316 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G + +PDL L
Sbjct: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLS--ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY E+
Sbjct: 398 IMQVWQMAENIYNDED 413
Score = 106 (42.4 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 67 EE 68
+E
Sbjct: 74 DE 75
Score = 83 (34.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 30/149 (20%), Positives = 65/149 (43%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H +++ + P + +I T + + + +FD K S D G +P + GH
Sbjct: 117 IEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD + ++ + K I +
Sbjct: 177 QKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK--TIFTGH-------- 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 351 (128.6 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 98/316 (31%), Positives = 155/316 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G + +PDL L
Sbjct: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLS--ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY E+
Sbjct: 398 IMQVWQMAENIYNDED 413
Score = 106 (42.4 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 67 EE 68
+E
Sbjct: 74 DE 75
Score = 83 (34.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 30/149 (20%), Positives = 65/149 (43%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H +++ + P + +I T + + + +FD K S D G +P + GH
Sbjct: 117 IEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD + ++ + K I +
Sbjct: 177 QKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK--TIFTGH-------- 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 351 (128.6 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 98/316 (31%), Positives = 155/316 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G + +PDL L
Sbjct: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLS--ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY E+
Sbjct: 398 IMQVWQMAENIYNDED 413
Score = 106 (42.4 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 67 EE 68
+E
Sbjct: 74 DE 75
Score = 83 (34.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 30/149 (20%), Positives = 65/149 (43%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H +++ + P + +I T + + + +FD K S D G +P + GH
Sbjct: 117 IEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD + ++ + K I +
Sbjct: 177 QKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK--TIFTGH-------- 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 351 (128.6 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 98/316 (31%), Positives = 155/316 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G + +PDL L
Sbjct: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLS--ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY E+
Sbjct: 398 IMQVWQMAENIYNDED 413
Score = 106 (42.4 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 67 EE 68
+E
Sbjct: 74 DE 75
Score = 83 (34.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 30/149 (20%), Positives = 65/149 (43%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H +++ + P + +I T + + + +FD K S D G +P + GH
Sbjct: 117 IEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD + ++ + K I +
Sbjct: 177 QKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK--TIFTGH-------- 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 351 (128.6 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 98/316 (31%), Positives = 156/316 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G + +PDL L
Sbjct: 121 INHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSG--ECNPDLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLS--ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY E+
Sbjct: 398 IMQVWQMAENIYNDED 413
Score = 106 (42.4 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTS 73
Query: 67 EE 68
+E
Sbjct: 74 DE 75
Score = 79 (32.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/149 (20%), Positives = 64/149 (42%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H +++ + P + +I T + + +FD K S D G +P + GH
Sbjct: 117 IEIKINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD + ++ + K I +
Sbjct: 177 QKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAK--TIFTGH-------- 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 351 (128.6 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 98/316 (31%), Positives = 155/316 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G + +PDL L
Sbjct: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLS--ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY E+
Sbjct: 398 IMQVWQMAENIYNDED 413
Score = 101 (40.6 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFN 66
ER +++ + WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 14 ERVINEEHKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 67 EE 68
+E
Sbjct: 74 DE 75
Score = 83 (34.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 30/149 (20%), Positives = 65/149 (43%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H +++ + P + +I T + + + +FD K S D G +P + GH
Sbjct: 117 IEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD + ++ + K I +
Sbjct: 177 QKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK--TIFTGH-------- 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 345 (126.5 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 100/325 (30%), Positives = 160/325 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN+ ++AT T S DVL++D P++ G + PDL L
Sbjct: 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSG--ECQPDLR----LR 178
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P S A+ + P E I A+ + GH VED
Sbjct: 179 GHQKEGYGLSWNPNLNGYLLS--ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVED 236
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD R+ +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 237 VAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTAEVNCLSFNPYSEFILAT 295
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D L++WD
Sbjct: 296 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 350
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 351 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWIICSVSEDN 401
Query: 372 VLEIWRMIDLIYRPEE-EVLA-ELD 394
++++W+M + +Y EE E+ A EL+
Sbjct: 402 IMQVWQMAENVYNDEEPEIPASELE 426
Score = 107 (42.7 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 18 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTS 77
Query: 67 EE 68
+E
Sbjct: 78 DE 79
Score = 80 (33.2 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 27/149 (18%), Positives = 64/149 (42%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS----DGVGSPIHKFEGH 287
++++ H +++ + P + +I T + + + +FD K S G P + GH
Sbjct: 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH 180
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ + S+++D + +WD ++ + +I + ++
Sbjct: 181 QKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKE-------HRVID---AKNIFTGH 230
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 231 TAVVEDVAWHLLHESLFGSVADDQKLMIW 259
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 344 (126.2 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 88/248 (35%), Positives = 127/248 (51%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G + +PDL L
Sbjct: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLS--ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ 325
KIGE+Q
Sbjct: 347 LSKIGEEQ 354
Score = 144 (55.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 59/246 (23%), Positives = 97/246 (39%)
Query: 93 PQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAAD---SHPDLDQSVVLWSIQDHVSALA 149
P S + + +D + +WD+ A P V+ A H + + V W + H S
Sbjct: 187 PNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS-WHLL-HESLFG 244
Query: 150 AEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQE 209
+ K S N SK P S S+ A H V + F P S
Sbjct: 245 SVADDQKLMI-WDTRSNNTSK-------P--SHSVDA------HTAEVNCLSFNPYSEFI 288
Query: 210 FCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDR 269
+ D + LWD R+ E +H +I V W+PH+ ++ + D ++++D
Sbjct: 289 LATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 270 RKL--------TSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDH-EK 320
K+ DG + GH+A + W+P++ V S +ED I+ +W E
Sbjct: 348 SKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN 407
Query: 321 IGEKQD 326
I +D
Sbjct: 408 INNDED 413
Score = 106 (42.4 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 67 EE 68
+E
Sbjct: 74 DE 75
Score = 83 (34.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 30/149 (20%), Positives = 65/149 (43%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H +++ + P + +I T + + + +FD K S D G +P + GH
Sbjct: 117 IEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD + ++ + K I +
Sbjct: 177 QKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAK--TIFTGH-------- 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
Score = 53 (23.7 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDL 132
H E+ +++ P N I+A+ + +WD+ + A D P+L
Sbjct: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 347 (127.2 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 99/316 (31%), Positives = 151/316 (47%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G D PDL L
Sbjct: 120 INHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSG--DCSPDLR----LR 173
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ + S + G P E + A+ + GH VED
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAG--PKEGKVVDAKAIFTGHSAVVED 231
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 290
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + V WSP ++ SS D LN+WD
Sbjct: 291 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 396
Query: 372 VLEIWRMIDLIYRPEE 387
+++IW+M + IY EE
Sbjct: 397 IMQIWQMAENIYNDEE 412
Score = 102 (41.0 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKD 59
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 343 (125.8 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 102/325 (31%), Positives = 157/325 (48%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P + G + +PDL L
Sbjct: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLR----LR 173
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ + S + G P E + A+ + GH VED
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVED 231
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILAT 290
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + V WSP ++ SS D LN+WD
Sbjct: 291 GSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 396
Query: 372 VLEIWRMIDLIYRPEE-EVLA-ELD 394
+++IW+M + IY EE +V A EL+
Sbjct: 397 IMQIWQMAENIYNDEESDVTASELE 421
Score = 104 (41.7 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 344 (126.2 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 98/316 (31%), Positives = 151/316 (47%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G + PDL L
Sbjct: 120 INHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSG--ECSPDLR----LR 173
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ + S + G P E + A+ + GH VED
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAG--PKEGKVVDAKAVFTGHSAVVED 231
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 290
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + V WSP ++ SS D LN+WD
Sbjct: 291 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 396
Query: 372 VLEIWRMIDLIYRPEE 387
+++IW+M + IY EE
Sbjct: 397 IMQIWQMAENIYNDEE 412
Score = 102 (41.0 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P + + K+
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKD 59
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 347 (127.2 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 96/316 (30%), Positives = 156/316 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T + DVL++D P++ G + +P+L L
Sbjct: 121 ITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSG--ECNPNLR----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + + S A+ + P E + A+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLS--ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY E+
Sbjct: 398 IMQVWQMAENIYNDED 413
Score = 98 (39.6 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRW 44
ER +++ Y WK P LYD + H L WPSL+ +W
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQW 49
Score = 85 (35.0 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 30/149 (20%), Positives = 66/149 (44%)
Query: 232 VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGH 287
++++ H+ +++ + P + +I T + + + +FD K S D G +P + GH
Sbjct: 117 IEIKITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGH 176
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ W+P+ S S+++D + +WD + ++ + K I +
Sbjct: 177 QKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAK--TIFTGH-------- 226
Query: 348 TKLLTSIGMHLIHGRLLVCLTMVKVLEIW 376
T ++ + HL+H L + + L IW
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIW 255
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 341 (125.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 98/316 (31%), Positives = 151/316 (47%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P + G + +PDL L
Sbjct: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLR----LR 173
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ + S + G P E + A+ + GH VED
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVED 231
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILAT 290
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + V WSP ++ SS D LN+WD
Sbjct: 291 GSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 396
Query: 372 VLEIWRMIDLIYRPEE 387
+++IW+M + IY EE
Sbjct: 397 IMQIWQMAENIYNDEE 412
Score = 104 (41.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 341 (125.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 98/316 (31%), Positives = 151/316 (47%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P + G + +PDL L
Sbjct: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLR----LR 173
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ + S + G P E + A+ + GH VED
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVED 231
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILAT 290
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + V WSP ++ SS D LN+WD
Sbjct: 291 GSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 396
Query: 372 VLEIWRMIDLIYRPEE 387
+++IW+M + IY EE
Sbjct: 397 IMQIWQMAENIYNDEE 412
Score = 104 (41.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 341 (125.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 98/316 (31%), Positives = 151/316 (47%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P + G + +PDL L
Sbjct: 164 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLR----LR 217
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ + S + G P E + A+ + GH VED
Sbjct: 218 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVED 275
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 276 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILAT 334
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + V WSP ++ SS D LN+WD
Sbjct: 335 GSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 389
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 390 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 440
Query: 372 VLEIWRMIDLIYRPEE 387
+++IW+M + IY EE
Sbjct: 441 IMQIWQMAENIYNDEE 456
Score = 104 (41.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 57 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 103
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 341 (125.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 98/316 (31%), Positives = 151/316 (47%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P + G + +PDL L
Sbjct: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLR----LR 173
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ + S + G P E + A+ + GH VED
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVED 231
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILAT 290
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + V WSP ++ SS D LN+WD
Sbjct: 291 GSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 396
Query: 372 VLEIWRMIDLIYRPEE 387
+++IW+M + IY EE
Sbjct: 397 IMQIWQMAENIYNDEE 412
Score = 104 (41.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 341 (125.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 98/316 (31%), Positives = 151/316 (47%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P + G + +PDL L
Sbjct: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLR----LR 173
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ + S + G P E + A+ + GH VED
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVED 231
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILAT 290
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + V WSP ++ SS D LN+WD
Sbjct: 291 GSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 396
Query: 372 VLEIWRMIDLIYRPEE 387
+++IW+M + IY EE
Sbjct: 397 IMQIWQMAENIYNDEE 412
Score = 104 (41.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 341 (125.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 98/316 (31%), Positives = 151/316 (47%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P + G + +PDL L
Sbjct: 164 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLR----LR 217
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ + S + G P E + A+ + GH VED
Sbjct: 218 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVED 275
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 276 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILAT 334
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + V WSP ++ SS D LN+WD
Sbjct: 335 GSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 389
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 390 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 440
Query: 372 VLEIWRMIDLIYRPEE 387
+++IW+M + IY EE
Sbjct: 441 IMQIWQMAENIYNDEE 456
Score = 104 (41.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 57 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 103
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 341 (125.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 98/316 (31%), Positives = 151/316 (47%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P + G + +PDL L
Sbjct: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLR----LR 173
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ + S + G P E + A+ + GH VED
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVED 231
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILAT 290
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + V WSP ++ SS D LN+WD
Sbjct: 291 GSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 396
Query: 372 VLEIWRMIDLIYRPEE 387
+++IW+M + IY EE
Sbjct: 397 IMQIWQMAENIYNDEE 412
Score = 104 (41.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 341 (125.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 98/316 (31%), Positives = 151/316 (47%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P + G + +PDL L
Sbjct: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLR----LR 173
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ + S + G P E + A+ + GH VED
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVED 231
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILAT 290
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + V WSP ++ SS D LN+WD
Sbjct: 291 GSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 396
Query: 372 VLEIWRMIDLIYRPEE 387
+++IW+M + IY EE
Sbjct: 397 IMQIWQMAENIYNDEE 412
Score = 104 (41.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 279 (103.3 bits), Expect = 1.6e-39, Sum P(3) = 1.6e-39
Identities = 69/222 (31%), Positives = 113/222 (50%)
Query: 178 PLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVE 235
P E + A+ + GH VEDV + F SV DD L++WD RS +T P+ V+
Sbjct: 209 PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD 268
Query: 236 KAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQ 295
AH A+++C+ +NP+ ++ TGSAD ++ ++D R L +H FE H + V
Sbjct: 269 -AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVH 322
Query: 296 WSPDKSSVFGSSAEDGILNIWDHEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKL 350
WSP ++ SS D LN+WD KIGE+Q + G + IH +++ + D
Sbjct: 323 WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 382
Query: 351 LTSIGMHLIHGRLLVC-LTMVKVLEIWRMIDLIYRPEEEVLA 391
+ ++C ++ +++IW+M + IY EE +A
Sbjct: 383 ---------NEPWVICSVSEDNIMQIWQMAENIYNDEEPDIA 415
Score = 133 (51.9 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 54/225 (24%), Positives = 88/225 (39%)
Query: 103 TDSPDVLIWDVEAQPNRHAVLGAA---DSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTA 159
+D V +WD+ A P ++ A H + + V W + H S + K
Sbjct: 195 SDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVA-WHLL-HESLFGSVADDQKLMI 252
Query: 160 SGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCL 219
S SK P S S+ A H V + F P S + D +
Sbjct: 253 -WDTRSNTTSK-------P--SHSVDA------HTAEVNCLSFNPYSEFILATGSADKTV 296
Query: 220 ILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKL------- 272
LWD R+ E +H +I V W+PH+ ++ + D ++++D K+
Sbjct: 297 ALWDLRNLKLKLHSFE-SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
Query: 273 -TSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
DG + GH+A + W+P++ V S +ED I+ IW
Sbjct: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
Score = 112 (44.5 bits), Expect = 1.6e-39, Sum P(3) = 1.6e-39
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDL 132
I H GEVNR R +PQN I+AT T S DVL++D P++ G + +PDL
Sbjct: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSG--ECNPDL 169
Score = 103 (41.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/136 (25%), Positives = 61/136 (44%)
Query: 191 LGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWD-ARSGSTPAVKVE-------KAHNADI 242
+ HE V ++ P + + + ++++D + S P E + H +
Sbjct: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
Query: 243 HCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDG-VGSPIHKFEGHSAAVLCVQWSPDKS 301
+ + WN + +L+ S D+++ ++D +G + F GHSA V V W
Sbjct: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
Query: 302 SVFGSSAEDGILNIWD 317
S+FGS A+D L IWD
Sbjct: 239 SLFGSVADDQKLMIWD 254
Score = 102 (41.0 bits), Expect = 1.6e-39, Sum P(3) = 1.6e-39
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER + + Y WK P LYD + H L WPSL+ +W P + + K+
Sbjct: 13 ERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
Score = 93 (37.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 37/142 (26%), Positives = 59/142 (41%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSI 141
H EVN + P + I+AT + V +WD+ N L + +SH D + V WS
Sbjct: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR---NLKLKLHSFESHKD-EIFQVHWS- 324
Query: 142 QDHVSALAAEPGSAKSTASGGANSKNASKSGGNG-DKPLESPSIGARGKYLGHEDTVEDV 200
H + A G+ + + +S + D P E I G GH + D
Sbjct: 325 -PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HG---GHTAKISDF 378
Query: 201 QFCPSSAQEFCSVGDDSCLILW 222
+ P+ CSV +D+ + +W
Sbjct: 379 SWNPNEPWVICSVSEDNIMQIW 400
Score = 63 (27.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 31/144 (21%), Positives = 60/144 (41%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGHSAAVLC 293
H +++ + P + +I T + + +FD K S D G +P + GH
Sbjct: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 180
Query: 294 VQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGEL-KYPIIHPAYSSDMLDIETKLLT 352
+ W+ + S+++D + +WD G K+ G++ I +S+ + D+
Sbjct: 181 LSWNSNLKGHLLSASDDHTVCLWDISA-GPKE--GKIVDAKAIFTGHSAVVEDV------ 231
Query: 353 SIGMHLIHGRLLVCLTMVKVLEIW 376
HL+H L + + L IW
Sbjct: 232 --AWHLLHESLFGSVADDQKLMIW 253
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 318 (117.0 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 97/324 (29%), Positives = 154/324 (47%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQ I+AT + S DV I+D P S P + L
Sbjct: 117 INHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYP----------SVPKDNTFNPLL 166
Query: 140 SIQDHVS---ALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDT 196
++ H L+ P S ++ + NG+ + AR + GHE
Sbjct: 167 KLKGHTKEGYGLSWNPNKEGLILSA-SDDQTVCHWDINGNAGANG-ELKAREIFKGHESV 224
Query: 197 VEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLIL 256
VEDV + F SVGDD L++WD R+ + P ++ AH+A+++C+ +NP+ ++
Sbjct: 225 VEDVAWHVLHDGVFGSVGDDKKLLIWDLRT-NVPGHAID-AHSAEVNCLAFNPYSEFILA 282
Query: 257 TGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
TGSAD ++ ++D R L +H FE H + VQWSP ++ SS D L++W
Sbjct: 283 TGSADKTVALWDLRNLRLK-----LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Query: 317 DHEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMV 370
D KIGE Q + G + IH +++ + D + +VC ++
Sbjct: 338 DLSKIGEDQTAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVVCSVSED 388
Query: 371 KVLEIWRMIDLIYRP-EEEVLAEL 393
+L++W+M D IY E+E A++
Sbjct: 389 NILQVWQMADNIYNDVEDETPADM 412
Score = 119 (46.9 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR-QRLYLSEQFNE 67
+R +D Y WK P LYD + H L WPSLS +W P++E+ + + RL L ++
Sbjct: 11 DRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKESSDHTVHRLILGTHTSD 70
Query: 68 EARSPFVKK 76
E + K
Sbjct: 71 EQNHLLISK 79
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 328 (120.5 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 97/317 (30%), Positives = 150/317 (47%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S VL++D P + G + +PDL L
Sbjct: 120 INHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSG--ECNPDLR----LR 173
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ + S + G P E + A+ + GH VED
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG--PKEGKIVDAKAVFTGHSAVVED 231
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 232 VAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILAT 290
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVL-CVQWSPDKSSVFGSSAEDGILNIW 316
GSAD ++ ++D R L +H FE H + V WSP ++ SS D LN+W
Sbjct: 291 GSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVW 345
Query: 317 DHEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMV 370
D KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 346 DLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSED 396
Query: 371 KVLEIWRMIDLIYRPEE 387
+++IW+M + IY EE
Sbjct: 397 NIMQIWQMAENIYNDEE 413
Score = 104 (41.7 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 328 (120.5 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 95/316 (30%), Positives = 154/316 (48%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I + GEVNR R +PQN I+AT T S DVL++D P++ G +S DL L
Sbjct: 121 INYEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNS--DLH----LR 174
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + S A+ + P E +GA+ + GH VED
Sbjct: 175 GHQKEGYGLSWNPYLSGYLLS--ASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVED 232
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ A+ A+++C+ +NP+ ++ +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AYTAEVNCLSFNPNSEFILAS 291
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GS D ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 292 GSPDKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 397
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY E+
Sbjct: 398 IMQVWQMAENIYNDED 413
Score = 101 (40.6 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQFN 66
ER +++ Y WK+ P LYD + H L WPSL+ +W P + + K+ RL L +
Sbjct: 14 ERVINEEYKIWKN-TPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFGIHRLVLGTHTS 72
Query: 67 EE 68
+E
Sbjct: 73 DE 74
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 319 (117.4 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 95/321 (29%), Positives = 157/321 (48%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQ S I+AT + DV I+D +H+ + ++ L + L
Sbjct: 117 INHEGEVNRARYMPQKSNIIATKSPHADVYIFDYL----KHSAVPRDNTFNPL---IRLK 169
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
L+ P S ++ + N ++ + + A+ + GHE VED
Sbjct: 170 GHTKEGYGLSWNPNKEGLILSA-SDDQTVCHWDINANQNVAG-ELQAKDVFKGHESVVED 227
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGS 259
V + F SVGDD L++WD R+ STP ++ AH+A+++C+ +NP+ ++ TGS
Sbjct: 228 VAWHVLHDGVFGSVGDDKKLLIWDVRT-STPGHCID-AHSAEVNCLAFNPYSEFILATGS 285
Query: 260 ADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHE 319
AD ++ ++D R L +H FE H + VQWSP ++ SS D L++WD
Sbjct: 286 ADKTVALWDLRNLRMK-----LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLS 340
Query: 320 KIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVKVL 373
KIGE Q + G + IH +++ + D + +VC ++ +L
Sbjct: 341 KIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVVCSVSEDNIL 391
Query: 374 EIWRMIDLIYRP-EEEVLAEL 393
++W+M D IY +EE A++
Sbjct: 392 QVWQMADNIYNEVDEETPADV 412
Score = 108 (43.1 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR-QRLYLSEQFNE 67
+R +D Y WK P LYD + H L WPSLS +W P + + + RL L ++
Sbjct: 11 DRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKDNSDHTIHRLILGTHTSD 70
Query: 68 EARSPFVKK 76
E + K
Sbjct: 71 EQNHLLISK 79
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 319 (117.4 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 95/321 (29%), Positives = 157/321 (48%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQ S I+AT + DV I+D +H+ + ++ L + L
Sbjct: 117 INHEGEVNRARYMPQKSNIIATKSPHADVYIFDYL----KHSAVPRDNTFNPL---IRLK 169
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
L+ P S ++ + N ++ + + A+ + GHE VED
Sbjct: 170 GHTKEGYGLSWNPNKEGLILSA-SDDQTVCHWDINANQNVAG-ELQAKDVFKGHESVVED 227
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGS 259
V + F SVGDD L++WD R+ STP ++ AH+A+++C+ +NP+ ++ TGS
Sbjct: 228 VAWHVLHDGVFGSVGDDKKLLIWDVRT-STPGHCID-AHSAEVNCLAFNPYSEFILATGS 285
Query: 260 ADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHE 319
AD ++ ++D R L +H FE H + VQWSP ++ SS D L++WD
Sbjct: 286 ADKTVALWDLRNLRMK-----LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLS 340
Query: 320 KIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVKVL 373
KIGE Q + G + IH +++ + D + +VC ++ +L
Sbjct: 341 KIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVVCSVSEDNIL 391
Query: 374 EIWRMIDLIYRP-EEEVLAEL 393
++W+M D IY +EE A++
Sbjct: 392 QVWQMADNIYNEVDEETPADV 412
Score = 108 (43.1 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR-QRLYLSEQFNE 67
+R +D Y WK P LYD + H L WPSLS +W P + + + RL L ++
Sbjct: 11 DRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKDNSDHTIHRLILGTHTSD 70
Query: 68 EARSPFVKK 76
E + K
Sbjct: 71 EQNHLLISK 79
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 305 (112.4 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 91/325 (28%), Positives = 156/325 (48%)
Query: 74 VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLD 133
V+ + I H GEVNR R +PQN I+AT T + +V ++D P++ + GA + PDL
Sbjct: 116 VQIIQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACN--PDL- 172
Query: 134 QSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGH 193
++ H S S + S +A + + ++ S+ A+ + H
Sbjct: 173 ------KLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAH 226
Query: 194 EDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGS-TPAVKVEKAHNADIHCVDWNPHDV 252
E VEDV + F SVGDD L++WD RS S + V+ AH+ +++C+ +NP +
Sbjct: 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNE 286
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGI 312
++ TGS D ++ +FD RKL++ +H F+ H V V W+P ++ S
Sbjct: 287 WVVATGSTDKTVKLFDLRKLST-----ALHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341
Query: 313 LNIWDHEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCL 367
L +WD +I E+Q + G + IH ++S + D + ++ +
Sbjct: 342 LMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFS--------WNPCEDWVISSV 393
Query: 368 TMVKVLEIWRMIDLIYRPEEEVLAE 392
+L+IW+M + IY E++ E
Sbjct: 394 AEDNILQIWQMAENIYHDEDDAPGE 418
Score = 109 (43.4 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQFN 66
ER +++ Y WK P LYD + H L WPSL+ W P E+ + K+ Q++ L +
Sbjct: 14 ERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTS 73
Query: 67 E 67
E
Sbjct: 74 E 74
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 313 (115.2 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 94/323 (29%), Positives = 152/323 (47%)
Query: 74 VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLD 133
++ + I H GEVNR R +PQN I+AT T S +V I+D P G P+L
Sbjct: 112 IEIIQKINHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCS--PNL- 168
Query: 134 QSVVLWSIQDH-VSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLG 192
+ + + +S + G S + + + D L++ +I Y G
Sbjct: 169 -KLTGHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNI-----YNG 222
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H VEDV + F SVGDD L++WD R+G+ P + V +AHN++++C+ +NP
Sbjct: 223 HTSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKP-IHVVEAHNSEVNCLSFNPFCE 281
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGI 312
L+ TGS D ++ ++D R L G+ +H H+ V VQ+SP +V S D
Sbjct: 282 FLVATGSTDKTVALWDMRNL-----GNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRR 336
Query: 313 LNIWDHEKIGEKQDY-----GELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCL 367
+N+WD +IGE+Q+ G + IH ++S + D + +
Sbjct: 337 VNVWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWS--------IASV 388
Query: 368 TMVKVLEIWRMIDLIYRPEEEVL 390
+L+IW+M + IY E+ L
Sbjct: 389 AEDNILQIWQMAENIYNDREDDL 411
Score = 95 (38.5 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGP 46
E+ +++ Y WK P LYD + H L WPSL+ W P
Sbjct: 10 EKVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLP 47
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 351 (128.6 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 98/316 (31%), Positives = 155/316 (49%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H GEVNR R +PQN I+AT T S DVL++D P++ G + +PDL L
Sbjct: 86 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLR----LR 139
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVED 199
Q L+ P + S A+ + P E + A+ + GH VED
Sbjct: 140 GHQKEGYGLSWNPNLSGHLLS--ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 197
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILT 257
V + F SV DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ T
Sbjct: 198 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILAT 256
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GSAD ++ ++D R L +H FE H + VQWSP ++ SS D LN+WD
Sbjct: 257 GSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 311
Query: 318 HEKIGEKQ-----DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
KIGE+Q + G + IH +++ + D + ++C ++
Sbjct: 312 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDN 362
Query: 372 VLEIWRMIDLIYRPEE 387
++++W+M + IY E+
Sbjct: 363 IMQVWQMAENIYNDED 378
Score = 55 (24.4 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 33 HNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQFNEE 68
H L WPSL+ +W P + + K+ RL L ++E
Sbjct: 3 HALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE 40
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 123/414 (29%), Positives = 191/414 (46%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYL------- 61
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+ +L
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTS 72
Query: 62 SEQF----------NEEAR-------SPFVKKFKTII---HPGEVNRIRELPQNSKIVAT 101
EQ N++A+ S K + I H GEVNR R +PQN I+AT
Sbjct: 73 DEQNHLVVARVHIPNDDAQFDASHCDSDKGGKIECEIKINHEGEVNRARYMPQNPHIIAT 132
Query: 102 HTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASG 161
T S DVL++D P + G + +PDL L Q L+ + S
Sbjct: 133 KTPSSDVLVFDYTKHPAKPDPSG--ECNPDLR----LRGHQKEGYGLSWNSNLSGHLLSA 186
Query: 162 GANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLIL 221
+ G P E + A+ + GH VEDV + F SV DD L++
Sbjct: 187 SDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 244
Query: 222 WDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGS 279
WD RS +T P+ V+ AH A+++C+ +NP+ ++ TGSAD ++ ++D R L
Sbjct: 245 WDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK---- 299
Query: 280 PIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQ-----DYGELKYPI 334
+H FE H + V WSP ++ SS D LN+WD KIGE+Q + G +
Sbjct: 300 -LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 358
Query: 335 IHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVKVLEIWRMIDLIYRPEE 387
IH +++ + D + ++C ++ +++IW+M + IY EE
Sbjct: 359 IHGGHTAKISDFSWNP---------NEPWVICSVSEDNIMQIWQMAENIYNDEE 403
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 123/414 (29%), Positives = 191/414 (46%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYL------- 61
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+ +L
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTS 72
Query: 62 SEQF----------NEEAR-------SPFVKKFKTII---HPGEVNRIRELPQNSKIVAT 101
EQ N++A+ S K + I H GEVNR R +PQN I+AT
Sbjct: 73 DEQNHLVVARVHIPNDDAQFDASHCDSEKGGKIECEIKINHEGEVNRARYMPQNPHIIAT 132
Query: 102 HTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASG 161
T S DVL++D P + G + +PDL L Q L+ + S
Sbjct: 133 KTPSSDVLVFDYTKHPAKPDPSG--ECNPDLR----LRGHQKEGYGLSWNSNLSGHLLSA 186
Query: 162 GANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLIL 221
+ G P E + A+ + GH VEDV + F SV DD L++
Sbjct: 187 SDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 244
Query: 222 WDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGS 279
WD RS +T P+ V+ AH A+++C+ +NP+ ++ TGSAD ++ ++D R L
Sbjct: 245 WDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK---- 299
Query: 280 PIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQ-----DYGELKYPI 334
+H FE H + V WSP ++ SS D LN+WD KIGE+Q + G +
Sbjct: 300 -LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 358
Query: 335 IHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVKVLEIWRMIDLIYRPEE 387
IH +++ + D + ++C ++ +++IW+M + IY EE
Sbjct: 359 IHGGHTAKISDFSWNP---------NEPWVICSVSEDNIMQIWQMAENIYNDEE 403
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 248 (92.4 bits), Expect = 4.2e-26, Sum P(2) = 4.2e-26
Identities = 78/248 (31%), Positives = 112/248 (45%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLW 139
I H G+VNR R +PQ +I+AT + + I+D H L ++ P Q+V+
Sbjct: 128 IPHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTC----HDALTTGEALP---QAVLKG 180
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGD-KPLESPSIGARGKYLGHEDTVE 198
+ L P + A+G + E+ I KY H D V
Sbjct: 181 HTAEGFG-LCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVN 239
Query: 199 DVQFCPSSAQEFCSVGDDSCLILWDAR-SGSTPAVKVEKAHNADIHCVDWNPHDVNLILT 257
DVQF P SV DD L + D R + A KV +AH+ I+ V NP + L+ T
Sbjct: 240 DVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLAT 299
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
SAD ++ ++D R +H EGH V ++WSP + SS+ D + IWD
Sbjct: 300 ASADKTVALWDLRNPYQR-----LHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWD 354
Query: 318 HEKIGEKQ 325
EKIGE+Q
Sbjct: 355 LEKIGEEQ 362
Score = 145 (56.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 34/137 (24%), Positives = 62/137 (45%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H + V P + + D + LWD R+ +E H +++ ++W+PHD
Sbjct: 280 HSKAINAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLE-GHEDEVYGLEWSPHDE 338
Query: 253 NLILTGSADNSIHMFDRRKLTSDGV------GSP--IHKFEGHSAAVLCVQWSPDKSSVF 304
++ + S D + ++D K+ + GSP + GH+ + W P++ V
Sbjct: 339 PILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWVV 398
Query: 305 GSSAEDGILNIWDHEKI 321
GS A+D IL IW ++
Sbjct: 399 GSLADDNILQIWSPSRV 415
Score = 105 (42.0 bits), Expect = 4.2e-26, Sum P(2) = 4.2e-26
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 8 MERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQ--ATYKNRQRLYL 61
+++++ + Y WK VP LYD + H L WPSL+ +W P + T + QRL L
Sbjct: 22 LQKTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPDKKTIPGTDYSIQRLIL 77
Score = 81 (33.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 37/161 (22%), Positives = 64/161 (39%)
Query: 64 QFNEEARSPFVKKFKTI-IHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAV 122
Q ++ +P + K I H +N + P N ++AT + V +WD+ N +
Sbjct: 261 QIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLR---NPYQR 317
Query: 123 LGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGD-KPLES 181
L + H D + + WS D EP A S+ + K G + E
Sbjct: 318 LHTLEGHED-EVYGLEWSPHD-------EPILASSSTDRRVCIWDLEKIGEEQTPEDAED 369
Query: 182 PSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILW 222
S + GH + + + +CP+ S+ DD+ L +W
Sbjct: 370 GSPELLFMHGGHTNRISEFSWCPNERWVVGSLADDNILQIW 410
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 239 (89.2 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 57/199 (28%), Positives = 99/199 (49%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
Y GHE + DV + + F S G+D L++WD R+ +V K H +++ + +NP
Sbjct: 213 YEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQH-QV-KVHEREVNYLSFNP 270
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ ++ T S+D+++ +FD RKL + P+H H V V+W P+ +V SS E
Sbjct: 271 FNEWVLATASSDSTVALFDLRKLNA-----PLHVMSSHEGEVFQVEWDPNHETVLASSGE 325
Query: 310 DGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTM 369
D L +WD ++GE+Q EL P + K+ + + ++ +
Sbjct: 326 DRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKI-SDFAWNKNEPWVIASVAE 384
Query: 370 VKVLEIWRMIDLIYRPEEE 388
L++W+M + IYR EE+
Sbjct: 385 DNSLQVWQMAESIYRDEED 403
Score = 170 (64.9 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 58/210 (27%), Positives = 96/210 (45%)
Query: 70 RSPFVKKFKT---IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAA 126
+ PF+ K + I GEVNR R +PQ +V T +V ++D +HA
Sbjct: 100 QDPFIPKVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYA----KHAAKSQT 155
Query: 127 DSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNA--SKSGGNGDKPLESPSI 184
S D D +V + + L+ P SG + K S DK L + +
Sbjct: 156 -SECDPDLRLVGHDKEGY--GLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFV 212
Query: 185 GARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHC 244
Y GHE + DV + + F S G+D L++WD R+ +V K H +++
Sbjct: 213 -----YEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQH-QV-KVHEREVNY 265
Query: 245 VDWNPHDVNLILTGSADNSIHMFDRRKLTS 274
+ +NP + ++ T S+D+++ +FD RKL +
Sbjct: 266 LSFNPFNEWVLATASSDSTVALFDLRKLNA 295
Score = 139 (54.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
H+ + + + W+P +L+GS D I ++D D V + + +EGH +A+ V W
Sbjct: 167 HDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWH 226
Query: 298 PDKSSVFGSSAEDGILNIWD 317
++FGS+ EDG L IWD
Sbjct: 227 MKNENLFGSAGEDGRLVIWD 246
Score = 99 (39.9 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 3 EGRK--GMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGP 46
EG++ GM + V++ ++ WK P LYD L +H L WPSL+ W P
Sbjct: 4 EGKEETGMGQ-VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVP 48
Score = 59 (25.8 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVE--AQPNRHAVLGAADSHPDL 132
H GEV ++ P + ++A+ + +++WD+ + L A D P+L
Sbjct: 303 HEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPEL 355
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 238 (88.8 bits), Expect = 5.4e-24, Sum P(2) = 5.4e-24
Identities = 58/199 (29%), Positives = 101/199 (50%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
Y GH+ +EDV + + F S GDD L++WD R+ +V K H +I+ + +NP
Sbjct: 214 YEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQH-QV-KVHEREINYLSFNP 271
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ ++ T S+D+++ +FD RKLT+ P+H H V V+W P+ +V SS E
Sbjct: 272 FNEWVLATASSDSTVALFDLRKLTA-----PLHVLSKHEGEVFQVEWDPNHETVLASSGE 326
Query: 310 DGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTM 369
D L +WD ++G++Q EL P + K+ + + ++ +
Sbjct: 327 DRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKI-SDFAWNKDEPWVISSVAE 385
Query: 370 VKVLEIWRMIDLIYRPEEE 388
L++W+M + IYR ++E
Sbjct: 386 DNSLQVWQMAESIYREDDE 404
Score = 172 (65.6 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 58/211 (27%), Positives = 95/211 (45%)
Query: 66 NEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGA 125
++E P V+ + I GEVNR R +PQ +V T +V ++D +A L
Sbjct: 100 DQEPIVPKVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFD-------YARLSG 152
Query: 126 ADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNA--SKSGGNGDKPLESPS 183
+ D + L + LA SG + + S DK L
Sbjct: 153 KPQTSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMH 212
Query: 184 IGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIH 243
+ Y GH+ +EDV + + F S GDD L++WD R+ +V K H +I+
Sbjct: 213 V-----YEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQH-QV-KVHEREIN 265
Query: 244 CVDWNPHDVNLILTGSADNSIHMFDRRKLTS 274
+ +NP + ++ T S+D+++ +FD RKLT+
Sbjct: 266 YLSFNPFNEWVLATASSDSTVALFDLRKLTA 296
Score = 128 (50.1 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
H + + + W+ +L+GS D I ++D +D V +P+H +EGH + + V W
Sbjct: 168 HEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWH 227
Query: 298 PDKSSVFGSSAEDGILNIWD 317
++FGS+ +D L IWD
Sbjct: 228 MKNENIFGSAGDDCQLVIWD 247
Score = 97 (39.2 bits), Expect = 5.4e-24, Sum P(2) = 5.4e-24
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 2 KEGRK--GMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGP 46
+EG+ G+++ V++ ++ WK P LYD + +H L WPSL+ W P
Sbjct: 4 EEGKDEAGLDQ-VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVP 49
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 279 (103.3 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 80/247 (32%), Positives = 126/247 (51%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLD-QSVVL 138
I H G VNRIR + Q S IVAT +D+ V IW++ H L A D+ Q+ L
Sbjct: 190 INHNGAVNRIRSMDQQSNIVATWSDNRSVYIWNIA----NH--LKALDNETVAPKQTAPL 243
Query: 139 WSIQDH-VSALAAE--PGSAKSTASGGANSK----NASKSGGNGDKPLESPSIGARGKYL 191
+I +H + A + P A A+G N+ NAS+S D +
Sbjct: 244 HTISNHSIEGYALDWSPKIAGRLATGDCNNSIFVTNASESTWKTDTQA----------FK 293
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH ++VED+Q+ PS + F S D + +WD R PA+ V KAH AD++ + W+ +
Sbjct: 294 GHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRKPK-PAITV-KAHTADVNVISWSRNV 351
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSP-DKSSVFGSSAED 310
L+++G D S ++D R + SP+ F+ H+ + ++W+P ++S V SS++D
Sbjct: 352 EYLLVSGCDDGSFRVWDLRAFKDN---SPVSDFKYHTGPITSIEWNPYEESQVIVSSSDD 408
Query: 311 GILNIWD 317
+ IWD
Sbjct: 409 QV-TIWD 414
Score = 126 (49.4 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
H+ + + +DW+P + TG +NSI + + + T + F+GH+ +V +QWS
Sbjct: 249 HSIEGYALDWSPKIAGRLATGDCNNSIFVTNASESTWK---TDTQAFKGHTESVEDIQWS 305
Query: 298 PDKSSVFGSSAEDGILNIWDHEK 320
P + VF S + D + IWD K
Sbjct: 306 PSEEKVFASCSIDQTVRIWDIRK 328
Score = 41 (19.5 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 2 KEGRKGMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLS 41
K R G++ +D + S YD + + ++ WP LS
Sbjct: 70 KVWRAGVDPLEEDEVLDYDSTA---YDMMHSMSVEWPCLS 106
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 284 (105.0 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 79/257 (30%), Positives = 127/257 (49%)
Query: 66 NEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHA---V 122
+E +++P ++ + + H G VNRIR +PQNS I + DS V +WD+ + N A
Sbjct: 143 DEASKTPNIQ-VRRVAHHGCVNRIRAMPQNSHICVSWADSGHVQVWDMSSHLNALAESET 201
Query: 123 LGAADSHPDLDQS-VVLWS-IQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLE 180
G + P L+Q+ +V +S +D A+ P +A SG S +G ++
Sbjct: 202 EGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVD 261
Query: 181 SPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNA 240
P + GH +VED+Q+ P+ F S D + +WD R G +PA+ KAHNA
Sbjct: 262 -PI-----PFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSF-KAHNA 314
Query: 241 DIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDK 300
D++ + WN ++ +GS D + + D R L G H FE H + ++WS +
Sbjct: 315 DVNVISWNRLASCMLASGSDDGTFSIRDLR-LIKGGDAVVAH-FEYHKHPITSIEWSAHE 372
Query: 301 SSVFGSSAEDGILNIWD 317
+S ++ D L IWD
Sbjct: 373 ASTLAVTSGDNQLTIWD 389
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 189 (71.6 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 44/141 (31%), Positives = 67/141 (47%)
Query: 181 SPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNA 240
S I + K+ GH EDV F F SVGDD L LWD R V H A
Sbjct: 208 SGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAV--GHTA 265
Query: 241 DIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDK 300
+++C+ +NP ++ TGS D ++ ++D R + ++ + H+ + V +SP
Sbjct: 266 EVNCITFNPFSEYILATGSVDKTVALWDMRNMRKK-----MYTLKHHNDEIFQVSFSPHY 320
Query: 301 SSVFGSSAEDGILNIWDHEKI 321
+V SS D + +WD KI
Sbjct: 321 ETVLASSGSDDRVIVWDISKI 341
Score = 114 (45.2 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 35/137 (25%), Positives = 60/137 (43%)
Query: 191 LGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPH 250
+GH V + F P S + D + LWD R+ + K HN +I V ++PH
Sbjct: 261 VGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTL-KHHNDEIFQVSFSPH 319
Query: 251 DVNLILTGSADNSIHMFDRRKL---------TSDGVGSP-IHKFEGHSAAVLCVQWSPDK 300
++ + +D+ + ++D K+ +SD V I GH+ V W+P++
Sbjct: 320 YETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNR 379
Query: 301 SSVFGSSAEDGILNIWD 317
SS E L +W+
Sbjct: 380 PWTICSSDEFNALQVWE 396
Score = 95 (38.5 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 230 PAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFD-RRKLTSDGVGSPIHKFEGHS 288
P +++ K H + + + W+ +LT D I +D T G P KF+GHS
Sbjct: 163 PQLRL-KGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHS 221
Query: 289 AAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
+ V + + VFGS +D LN+WD
Sbjct: 222 SNAEDVSFHALHNFVFGSVGDDRKLNLWD 250
Score = 93 (37.8 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 29/140 (20%), Positives = 61/140 (43%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVE-----KAHNADIHCVD 246
GHE + + + + GDD + WD + T + ++ K H+++ V
Sbjct: 169 GHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVS 228
Query: 247 WNPHDVNLILTGSA--DNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVF 304
+ H ++ + GS D ++++D R+ P GH+A V C+ ++P +
Sbjct: 229 F--HALHNFVFGSVGDDRKLNLWDLRQ------SKPQLTAVGHTAEVNCITFNPFSEYIL 280
Query: 305 GSSAEDGILNIWDHEKIGEK 324
+ + D + +WD + +K
Sbjct: 281 ATGSVDKTVALWDMRNMRKK 300
Score = 92 (37.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 30/127 (23%), Positives = 55/127 (43%)
Query: 195 DTVE-DVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVN 253
DT E D S +EF G+ S WD +K+ H ++H + PH+
Sbjct: 83 DTPEFDDAKWDSEREEFGGYGEGSAA-KWDTE------IKIN--HPGEVHRARYMPHNPF 133
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGS---PIHKFEGHSAAVLCVQWSPDKSSVFGSSAED 310
+I + + +++FD K S+ + P + +GH + WS + ++ +D
Sbjct: 134 IIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDD 193
Query: 311 GILNIWD 317
G++ WD
Sbjct: 194 GMICHWD 200
Score = 89 (36.4 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 46 PQLEQATYKNRQRLYLSEQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDS 105
P+ + A + + + + + E + + + + K I HPGEV+R R +P N I+A+ S
Sbjct: 85 PEFDDAKWDSEREEFGG--YGEGSAAKWDTEIK-INHPGEVHRARYMPHNPFIIASRGPS 141
Query: 106 PDVLIWDVEAQPN 118
DV I+D P+
Sbjct: 142 DDVYIFDYTKHPS 154
Score = 88 (36.0 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 1 MKEGRKGMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQL 48
M E E S + R WK VP LYD + + WPSLS +W P +
Sbjct: 1 MSEAESCEETSKEHRI--WKKNVPYLYDTVVTKEVEWPSLSVQWMPDV 46
Score = 76 (31.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 38/157 (24%), Positives = 57/157 (36%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSI 141
H EVN I P + I+AT + V +WD+ N + H D + S
Sbjct: 263 HTAEVNCITFNPFSEYILATGSVDKTVALWDMR---NMRKKMYTLKHHND---EIFQVSF 316
Query: 142 QDHVSALAAEPGSAKSTASGGANSKN--ASKSGGNGDK-PLESPSIGARGKYLGHEDTVE 198
H + A GS + +S S + D P E I A GH V
Sbjct: 317 SPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHA-----GHTGKVA 371
Query: 199 DVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVE 235
D + P+ CS + + L +W+ + + K E
Sbjct: 372 DFSWNPNRPWTICSSDEFNALQVWEVSNSLVSSEKWE 408
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 239 (89.2 bits), Expect = 8.7e-20, P = 8.7e-20
Identities = 56/183 (30%), Positives = 97/183 (53%)
Query: 213 VGDDSCLILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRR 270
V DD L++WD RS +T P+ V+ AH A+++C+ +NP+ ++ TGSAD ++ ++D R
Sbjct: 1 VADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 59
Query: 271 KLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQ----- 325
L +H FE H + VQWSP ++ SS D LN+WD KIGE+Q
Sbjct: 60 NLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 114
Query: 326 DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVKVLEIWRMIDLIYR 384
+ G + IH +++ + D + ++C ++ ++++W+M + IY
Sbjct: 115 EDGPPELLFIHGGHTAKISDFSWNP---------NEPWVICSVSEDNIMQVWQMAENIYN 165
Query: 385 PEE 387
E+
Sbjct: 166 DED 168
Score = 132 (51.5 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 36/143 (25%), Positives = 62/143 (43%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H V + F P S + D + LWD R+ E +H +I V W+PH+
Sbjct: 27 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNE 85
Query: 253 NLILTGSADNSIHMFDRRKL--------TSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVF 304
++ + D ++++D K+ DG + GH+A + W+P++ V
Sbjct: 86 TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 145
Query: 305 GSSAEDGILNIWDH-EKIGEKQD 326
S +ED I+ +W E I +D
Sbjct: 146 CSVSEDNIMQVWQMAENIYNDED 168
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 245 (91.3 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 73/259 (28%), Positives = 123/259 (47%)
Query: 63 EQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSK-IVATHTDSPDVLIWDVEAQPNR-H 120
E +E + P ++ + H G +NR+R + + + A ++ V I+D+ Q H
Sbjct: 142 EDDEDEDKKPQLE-LAMMPHYGGINRVRVTQRGEQTLAAVWSEKGQVEIFDLRLQLEAVH 200
Query: 121 AVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLE 180
+ ++ L+S H+S A S K G S + K+ + P E
Sbjct: 201 NSTAMSAFIKQEKEATPLFSFAGHMSEGFAIDWSPK--VPGRMVSGDCKKNIHVWE-PQE 257
Query: 181 SPS--IGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAH 238
+ I R + H +VED+Q+ P+ A F S D + +WD R+ + +AH
Sbjct: 258 GGTWKIDQR-PFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANEAH 316
Query: 239 NADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSP 298
++D++ + WN + IL+G D + ++D R+ S G P+ F+ HSA V VQWSP
Sbjct: 317 SSDVNVISWNRTEP-FILSGGDDGLLKVWDLRQFQS---GRPVASFKQHSAPVTSVQWSP 372
Query: 299 DKSSVFGSSAEDGILNIWD 317
SSVF +S D +++ WD
Sbjct: 373 VDSSVFAASGADDVISQWD 391
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 241 (89.9 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 75/274 (27%), Positives = 124/274 (45%)
Query: 66 NEEARSPFVKKFKTIIHPGEVNRIREL--PQNSK---IVATHTDSPDVLIWDVEAQPNRH 120
N + + + K+I G NR+R P NS ++A+ ++ V IWD+ P+
Sbjct: 165 NSDVEEDPILEHKSISTKGACNRVRSARRPANSSKESLLASFHETGKVHIWDIA--PHLR 222
Query: 121 AVLGAADSHPDLDQSVVLWSIQDHVS---ALAAEPGSAKSTASGGANSKNASKSGGNGDK 177
+ L + ++ L+++ H + AL P + AN +K G +
Sbjct: 223 S-LDSPGVMVSRKENSPLYTVNRHKTEGYALDWSPFEYSLLSGDNANEIFLTKYSNGGWQ 281
Query: 178 PLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKA 237
SP +L H VED+Q+ PS F S D +WD R+ + A
Sbjct: 282 TDSSP-------FLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNA 334
Query: 238 H-NADIHCVDWNPHDVNLILTGSADNSI-HMFDRRKL-TSDGVGSPIHKFEGHSAAVLCV 294
H D++ + WN NL+ TG ADN + ++D R L +S V +P+ F+ H A + +
Sbjct: 335 HPGVDVNVLSWNTRVPNLLATG-ADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSI 393
Query: 295 QWSPDKSSVFGSSAEDGILNIWDH--EKIGEKQD 326
+W P++ SV G D +++WD E E+QD
Sbjct: 394 EWHPNEDSVIGVVGADNQISLWDLSVELDEEEQD 427
Score = 42 (19.8 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 24 PVLYDWLANHNLVWPSLS 41
P +Y+ L N + WP LS
Sbjct: 91 PSVYEMLHNIQVKWPFLS 108
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 181 (68.8 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 55/206 (26%), Positives = 91/206 (44%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTP--AVKVEKAHNADIHCVDW 247
Y H V DVQ P + +V DD L + D R T A E H I+ + +
Sbjct: 210 YTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATAEGQHRDAINAIAF 269
Query: 248 NPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
NP ++ TGSAD +I ++D R L + +H E H+ +V + W P + +V S+
Sbjct: 270 NPAAETVLATGSADKTIGLWDLRNLKTK-----LHTLENHTDSVTSISWHPFEEAVLASA 324
Query: 308 AEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCL 367
+ D + WD + GE+Q + + P M T ++ +L +L
Sbjct: 325 SYDRKIMFWDLSRAGEEQTPEDAQDG---PPELLFMHGGHTNRISDFSWNLNDPWVLCSA 381
Query: 368 TMVKVLEIWRMIDLIYRPE-EEVLAE 392
+L++W++ D I + E+V E
Sbjct: 382 AEDNLLQVWKVADAIVGKDMEDVPTE 407
Score = 105 (42.0 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 2 KEGRKGMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRL 59
+E + E+ +++ Y WK P LYD + + L WP+L+ +W P + A+ K + RL
Sbjct: 15 QEEERTEEKIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQDASDKPYSTHRL 74
Query: 60 YLSEQFNEEARS 71
L + +A++
Sbjct: 75 LLGTHTSSDAQN 86
Score = 75 (31.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 27/105 (25%), Positives = 47/105 (44%)
Query: 219 LILWD-ARSGSTPAVKVEK-----AHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKL 272
+++WD ++ S P V H + + W+PH + TG D + + + + L
Sbjct: 146 VMIWDRSKHQSVPTGTVNPQMELLGHKQEGFGLSWSPHVAGHLATGR-DLTTYTKNNKAL 204
Query: 273 TSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
P+ + HS+ V VQ P SS+ G+ ++D L I D
Sbjct: 205 ------QPVRTYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILD 243
Score = 65 (27.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 28/141 (19%), Positives = 52/141 (36%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSI 141
H +N I P ++AT + + +WD+ N L ++H D S+
Sbjct: 260 HRDAINAIAFNPAAETVLATGSADKTIGLWDLR---NLKTKLHTLENHTDSVTSISWHPF 316
Query: 142 QDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQ 201
++ V A A+ A + + +G L + G GH + + D
Sbjct: 317 EEAVLASASYDRKIMFWDLSRAGEEQTPEDAQDGPPEL----LFMHG---GHTNRISDFS 369
Query: 202 FCPSSAQEFCSVGDDSCLILW 222
+ + CS +D+ L +W
Sbjct: 370 WNLNDPWVLCSAAEDNLLQVW 390
Score = 54 (24.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 23/93 (24%), Positives = 36/93 (38%)
Query: 66 NEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGA 125
N +A P V+ + H VN ++ P +S ++ T +D + I D A A
Sbjct: 200 NNKALQP-VRTYTH--HSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATA 256
Query: 126 ADSHPDLDQSVVLWSIQDHVSALAAEPGSAKST 158
H D ++ + V A GSA T
Sbjct: 257 EGQHRDAINAIAFNPAAETVLAT----GSADKT 285
Score = 38 (18.4 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 70 RSPFVKKFKT---IIHPGEVNRIRELP-QNSK--IVATHTDSPDV 108
++P FK I H GEVN+ R + SK V T T +P +
Sbjct: 122 KAPMEINFKIVQKIDHKGEVNKARVMIWDRSKHQSVPTGTVNPQM 166
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 222 (83.2 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 52/176 (29%), Positives = 93/176 (52%)
Query: 220 ILWDARSGST--PAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGV 277
++WD RS +T P+ V+ AH A+++C+ +NP+ ++ TGSAD ++ ++D R L
Sbjct: 1 MIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-- 57
Query: 278 GSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQ-----DYGELKY 332
+H FE H + VQWSP ++ SS D LN+WD KIGE+Q + G +
Sbjct: 58 ---LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 114
Query: 333 PIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVKVLEIWRMIDLIYRPEE 387
IH +++ + D + ++C ++ ++++W+M + IY E+
Sbjct: 115 LFIHGGHTAKISDFSWNP---------NEPWVICSVSEDNIMQVWQMAENIYNDED 161
Score = 132 (51.5 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 36/143 (25%), Positives = 62/143 (43%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H V + F P S + D + LWD R+ E +H +I V W+PH+
Sbjct: 20 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNE 78
Query: 253 NLILTGSADNSIHMFDRRKL--------TSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVF 304
++ + D ++++D K+ DG + GH+A + W+P++ V
Sbjct: 79 TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 138
Query: 305 GSSAEDGILNIWDH-EKIGEKQD 326
S +ED I+ +W E I +D
Sbjct: 139 CSVSEDNIMQVWQMAENIYNDED 161
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 190 (71.9 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 73/275 (26%), Positives = 122/275 (44%)
Query: 82 HPGEVNRIRELPQNSKIVATHTD-SPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWS 140
HP V + +PQ+ VAT + DVL++D E+ + +A P L +
Sbjct: 128 HPESVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFES----YSSASESP-LKPK---YR 179
Query: 141 IQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLG-HEDTVED 199
+ H + + S + + S++A+ S + + ES S ++ HE V D
Sbjct: 180 LTKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSD 239
Query: 200 VQFCPSSAQEFCSVGDDSCLILWDAR--SGSTPAVKVEKAHNADIHCVDWNPHDVNLILT 257
V+F SV D L + D R ST + AH+ IH V +NPH+ ++ T
Sbjct: 240 VRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILAT 299
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
S D +I ++D R L +H EGH V + +SP + + S++ D +WD
Sbjct: 300 CSTDKTIALWDLRNLNQR-----LHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWD 354
Query: 318 HEKIGEKQDYGELKY-P----IIHPAYSSDMLDIE 347
+IGE Q E + P +H ++S +D++
Sbjct: 355 LSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDMD 389
Score = 119 (46.9 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 31/132 (23%), Positives = 59/132 (44%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H + V F P + + D + LWD R+ + +E H + + ++PH+
Sbjct: 280 HSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQRLHTLE-GHEDIVTKISFSPHEE 338
Query: 253 NLILTGSADNSIHMFDRRKLTSDGV------GSP--IHKFEGHSAAVLCVQWSPDKSSVF 304
++ + SAD ++D ++ D G P + GH++ + + W P+ +
Sbjct: 339 PILASTSADRRTLVWDLSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDMDWCPNYNWTM 398
Query: 305 GSSAEDGILNIW 316
++AED IL IW
Sbjct: 399 ATAAEDNILQIW 410
Score = 88 (36.0 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQ 47
E+ +++ Y WK P LYD + L WP +S +W P+
Sbjct: 23 EKCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPE 61
Score = 87 (35.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 33/144 (22%), Positives = 57/144 (39%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSI 141
H G ++ + P N I+AT + + +WD+ N + L + H D+ + S
Sbjct: 280 HSGPIHSVAFNPHNDFILATCSTDKTIALWDLR---NLNQRLHTLEGHEDIVTKI---SF 333
Query: 142 QDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL---GHEDTVE 198
H EP A ++A + S+ G D+P E G GH
Sbjct: 334 SPH-----EEPILASTSADRRTLVWDLSRIGE--DQPAEEAQDGPPELLFMHGGHTSCTI 386
Query: 199 DVQFCPSSAQEFCSVGDDSCLILW 222
D+ +CP+ + +D+ L +W
Sbjct: 387 DMDWCPNYNWTMATAAEDNILQIW 410
Score = 78 (32.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 47/209 (22%), Positives = 76/209 (36%)
Query: 201 QFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILT-GS 259
Q P + E S GD+S L + + S P E +A + P D + + T G+
Sbjct: 100 QTVPPTTMEGASAGDESSLRVNISNLYSHP----ESVCSAKLM-----PQDDSCVATVGN 150
Query: 260 ADNSIHMFDRRKLTSDGVGS-----PIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILN 314
N + +FD+ S S P ++ H+ V W+ S ++D L+
Sbjct: 151 YHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATLS 210
Query: 315 IWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTMVKVLE 374
WD E LK +H + K ++ + H H LL ++ + L
Sbjct: 211 CWDLNAYNESDSASVLK---VH-------ISSHEKQVSDVRFHYKHQDLLASVSYDQYLH 260
Query: 375 IW--RMIDLIYRPEEEVLAELDKFKSHIF 401
+ R D +P V A S F
Sbjct: 261 VHDIRRPDASTKPARSVHAHSGPIHSVAF 289
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 140 (54.3 bits), Expect = 4.7e-16, Sum P(3) = 4.7e-16
Identities = 43/162 (26%), Positives = 76/162 (46%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTP--AVKVEKAHNADIHCVDWNPH 250
H D + D ++ + F +V +DS L + D R+ +T VK + N + ++ H
Sbjct: 207 HSDIINDNKWHNFNKDLFGTVSEDSLLKINDVRANNTTIDTVKCPQPFNT----LAFSHH 262
Query: 251 DVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAED 310
NL+ D+ ++++D R + P+H GH AV +++S V SS D
Sbjct: 263 SSNLLAAAGMDSYVYLYDLRNMKE-----PLHHMSGHEDAVNNLEFSTHVDGVVVSSGSD 317
Query: 311 GILNIWDHEKIGEKQ--DYGELKYP---IIHPAYSSDMLDIE 347
L +WD ++IG +Q D E P ++H + S + D +
Sbjct: 318 NRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGHRSSVNDFD 359
Score = 110 (43.8 bits), Expect = 4.7e-16, Sum P(3) = 4.7e-16
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 11 SVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGP 46
SVD+ Y WKS VP++YD+++ L WPSL+ +W P
Sbjct: 9 SVDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLP 44
Score = 97 (39.2 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 28/123 (22%), Positives = 57/123 (46%)
Query: 202 FCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSAD 261
F S+ + G DS + L+D R+ P + H ++ ++++ H ++++ +D
Sbjct: 259 FSHHSSNLLAAAGMDSYVYLYDLRNMKEPLHHMS-GHEDAVNNLEFSTHVDGVVVSSGSD 317
Query: 262 NSIHMFDRRKL--------TSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
N + M+D +++ DGV I GH ++V +P + S+ E+ IL
Sbjct: 318 NRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGHRSSVNDFDLNPQIPWLVASAEEENIL 377
Query: 314 NIW 316
+W
Sbjct: 378 QVW 380
Score = 81 (33.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 31/159 (19%), Positives = 67/159 (42%)
Query: 163 ANSKNASKSGGNGDKPLESPSIGAR--GKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLI 220
+N ++G L +P R KY HE+ + ++ P ++ +
Sbjct: 86 SNEDPQEEAGEEYQSSLPAPRSNIRITAKY-EHEEEITRARYMPQDPNIVATINGQGTVF 144
Query: 221 LWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGS- 279
L+ G +K K + + + ++ +L+GS D+++ +++ + S G +
Sbjct: 145 LYSRSEGLQSTLKFHKDNG---YALSFSTLVKGRLLSGSDDHTVALWE---VGSGGDPTK 198
Query: 280 PIHKFEG-HSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
P+ + HS + +W +FG+ +ED +L I D
Sbjct: 199 PVRTWNDLHSDIINDNKWHNFNKDLFGTVSEDSLLKIND 237
Score = 74 (31.1 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS-GS--TP---------AVKVEKAHN 239
GHED V +++F S G D+ L++WD + G+ TP + V H
Sbjct: 293 GHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGHR 352
Query: 240 ADIHCVDWNPHDVNLILTGSADNSIHMF 267
+ ++ D NP L+ + +N + ++
Sbjct: 353 SSVNDFDLNPQIPWLVASAEEENILQVW 380
Score = 73 (30.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 31/113 (27%), Positives = 44/113 (38%)
Query: 173 GNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAV 232
G G L S S G + H+D + F S DD + LW+ SG P
Sbjct: 139 GQGTVFLYSRSEGLQSTLKFHKDNGYALSFSTLVKGRLLSGSDDHTVALWEVGSGGDPTK 198
Query: 233 KVEK---AHNADIHCVDWNPHDVNLILTGSADNSIHMFDRR--KLTSDGVGSP 280
V H+ I+ W+ + +L T S D+ + + D R T D V P
Sbjct: 199 PVRTWNDLHSDIINDNKWHNFNKDLFGTVSEDSLLKINDVRANNTTIDTVKCP 251
Score = 60 (26.2 bits), Expect = 4.7e-16, Sum P(3) = 4.7e-16
Identities = 24/77 (31%), Positives = 34/77 (44%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWD----VEAQPNRHAVLGAADSHPDLDQSVV 137
H E+ R R +PQ+ IVAT V ++ +++ H G A S L + +
Sbjct: 117 HEEEITRARYMPQDPNIVATINGQGTVFLYSRSEGLQSTLKFHKDNGYALSFSTLVKGRL 176
Query: 138 LWSIQDHVSALAAEPGS 154
L DH AL E GS
Sbjct: 177 LSGSDDHTVALW-EVGS 192
Score = 48 (22.0 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 15/53 (28%), Positives = 21/53 (39%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADI 242
+ GH +V D P S +++ L +W S S P V N DI
Sbjct: 348 HAGHRSSVNDFDLNPQIPWLVASAEEENILQVWKC-SHSLPIVGGPPKVNKDI 399
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 225 (84.3 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 70/260 (26%), Positives = 120/260 (46%)
Query: 67 EEARSPFVKKFKTIIHPGEVNRIR-ELPQNSKIVATHTDSPDVLIWDV-EAQPNRHAVLG 124
E+ R P + +I H G +NRIR + +S + A +D V +W++ +A H + G
Sbjct: 150 EKKREPKMHAV-SIPHYGGINRIRSDRLGDSTVCACWSDQGRVQVWNITDALNYTHGMSG 208
Query: 125 AADSHPD-LDQSVVLWSIQDHVS-ALAAEPGSAKSTASGGANSKN---ASKSGGNGDKPL 179
+ + +D+ + + LA A+G K K GG
Sbjct: 209 ESKTEVQKIDRPLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGGQW---- 264
Query: 180 ESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAV--KVEKA 237
++GA GH+ +VED+ + P+ S D + LWD RS A V+KA
Sbjct: 265 ---AVGAN-PLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKA 320
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
H +D++ + WN H+ NLI++G D + ++ + + G P+ F+ H++ + V W
Sbjct: 321 HESDVNVISWNRHE-NLIVSGGDDGELKIWSLKTIQ---FGQPVALFKYHNSPITSVDWH 376
Query: 298 PDKSSVFGSSAEDGILNIWD 317
P +++ F +S ED IWD
Sbjct: 377 PHETTTFMASGEDDQTTIWD 396
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 37/139 (26%), Positives = 57/139 (41%)
Query: 219 LILWDARSGSTPAVKVEK--AHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDG 276
+ LW + G AV H + + W+P + L+ + SAD SI ++D R D
Sbjct: 253 IYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDA 312
Query: 277 VGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIH 336
+ K H + V + W+ ++ + S +DG L IW + I Q KY
Sbjct: 313 CVCTVQK--AHESDVNVISWNRHENLIV-SGGDDGELKIWSLKTIQFGQPVALFKYHN-S 368
Query: 337 PAYSSDMLDIETKLLTSIG 355
P S D ET + G
Sbjct: 369 PITSVDWHPHETTTFMASG 387
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 171 (65.3 bits), Expect = 8.7e-16, Sum P(2) = 8.7e-16
Identities = 76/289 (26%), Positives = 138/289 (47%)
Query: 48 LEQATYKN-RQRLYLSE-QFNEEAR-----SPFVKKFKT---IIHPGEVNRIRELPQNSK 97
L+ ++KN Q + +++ FN E +P + K KT I H G+VN++R +PQ
Sbjct: 112 LQIPSFKNLNQNIKINKLDFNPEREEFELTTPSLNKTKTLQKINHLGDVNKVRYMPQKPN 171
Query: 98 IVATHTDSPDVLIWDVEAQPN-RHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAK 156
I+A+ + +++I++ + ++ +L D+ DL + V + + H+ P +
Sbjct: 172 ILASANNLGNLVIYERTRHKSFKNTILD--DT--DLSK-VQVRLVNKHI------PSTTD 220
Query: 157 STA-SGGANSKNASKSGG-NG-----D-KPLESPSIGARGKYLGHEDTVEDVQFCPSSAQ 208
A NS+ S NG D K ES ++ + + V D+++ P+
Sbjct: 221 IFAIDWNRNSEGLLLSADMNGLVNLYDLKKYESETLNESQYWENNAIGVNDIEWFPTHDS 280
Query: 209 EFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFD 268
FC+ D+ L L+D R+ S AV+ N+ ++ V NP + TG ++ I M+D
Sbjct: 281 LFCTADDNGWLKLYDTRNQSA-AVQNANIGNS-VNSVACNPGYATGLATGDSNGVIKMWD 338
Query: 269 RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
R D S +H GHS +V ++W+P ++ GSS+ D + + D
Sbjct: 339 IRNF--DNSLSELH---GHSDSVTQLKWNPKCHNILGSSSSDHSVKLHD 382
Score = 102 (41.0 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPHDVN 253
++V V P A + GD + +I +WD R+ ++ H+ + + WNP N
Sbjct: 310 NSVNSVACNPGYATGLAT-GDSNGVIKMWDIRNFDNSLSELH-GHSDSVTQLKWNPKCHN 367
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
++ + S+D+S+ + D +++D S I GH V WS + S A+D L
Sbjct: 368 ILGSSSSDHSVKLHD---MSND---STIFTHLGHMLGVNDFDWSYADPWMVASVADDNSL 421
Query: 314 NIW 316
++W
Sbjct: 422 HVW 424
Score = 97 (39.2 bits), Expect = 8.7e-16, Sum P(2) = 8.7e-16
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 9 ERSVDDR----YTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQ 64
E ++D++ Y WK P+LYD+L ++L+WPSLS ++ P + T+ N L E
Sbjct: 32 ESAIDEKTQQNYRVWKKNAPLLYDYLVTNSLLWPSLSVQFFPDI---THIND----LGEN 84
Query: 65 FNEE 68
NEE
Sbjct: 85 KNEE 88
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 181 (68.8 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 40/132 (30%), Positives = 73/132 (55%)
Query: 194 EDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVN 253
+D V DV++ + F SV +DS + L+DAR + ++ N I+ + ++P N
Sbjct: 186 KDIVNDVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSNG-INSLAFSPFAEN 244
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
L+ G+ ++I++ D RKL + G +H GHS + C+++SP + + ++D +
Sbjct: 245 LVAIGNTSSNINLLDLRKL-GENSGL-LHTMMGHSEGITCMEFSPHHDGILATGSQDRRI 302
Query: 314 NIWDHEKIGEKQ 325
IWD K+GE+Q
Sbjct: 303 IIWDLFKVGEEQ 314
Score = 135 (52.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 39/142 (27%), Positives = 65/142 (45%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLI-LWDARS-GSTPAV-KVEKAHNADIHCVD 246
Y + + + F P A+ ++G+ S I L D R G + H+ I C++
Sbjct: 226 YAESSNGINSLAFSPF-AENLVAIGNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCME 284
Query: 247 WNPHDVNLILTGSADNSIHMFDRRKL--------TSDGVGSPIHKFEGHSAAVLCVQWSP 298
++PH ++ TGS D I ++D K+ DG GH+A V + W P
Sbjct: 285 FSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCP 344
Query: 299 DKSSVFGSSAEDGILNIWDHEK 320
K + GS A+D I+++W+ K
Sbjct: 345 FKDWMIGSVADDNIVHLWEISK 366
Score = 74 (31.1 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 11 SVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGP 46
S+ + Y W+ +Y++++ L+WPSL+ +W P
Sbjct: 10 SIKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLP 45
Score = 63 (27.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 25/110 (22%), Positives = 48/110 (43%)
Query: 8 MERSVDDRYTQWKSL-VPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQFN 66
M V + W SL + L ++ + L+ L + A LS N
Sbjct: 25 MYEFVSETALMWPSLTIQWLPNYTTTNGLIDAKLLLGTHTSNQSANQLKVASTQLSADPN 84
Query: 67 EEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQ 116
+A S +K + + + E+ R R +PQ++ IVAT +V +++++ +
Sbjct: 85 VKANSK-IKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNLDTE 133
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 181 (68.8 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 40/132 (30%), Positives = 73/132 (55%)
Query: 194 EDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVN 253
+D V DV++ + F SV +DS + L+DAR + ++ N I+ + ++P N
Sbjct: 186 KDIVNDVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSNG-INSLAFSPFAEN 244
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
L+ G+ ++I++ D RKL + G +H GHS + C+++SP + + ++D +
Sbjct: 245 LVAIGNTSSNINLLDLRKL-GENSGL-LHTMMGHSEGITCMEFSPHHDGILATGSQDRRI 302
Query: 314 NIWDHEKIGEKQ 325
IWD K+GE+Q
Sbjct: 303 IIWDLFKVGEEQ 314
Score = 135 (52.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 39/142 (27%), Positives = 65/142 (45%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLI-LWDARS-GSTPAV-KVEKAHNADIHCVD 246
Y + + + F P A+ ++G+ S I L D R G + H+ I C++
Sbjct: 226 YAESSNGINSLAFSPF-AENLVAIGNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCME 284
Query: 247 WNPHDVNLILTGSADNSIHMFDRRKL--------TSDGVGSPIHKFEGHSAAVLCVQWSP 298
++PH ++ TGS D I ++D K+ DG GH+A V + W P
Sbjct: 285 FSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCP 344
Query: 299 DKSSVFGSSAEDGILNIWDHEK 320
K + GS A+D I+++W+ K
Sbjct: 345 FKDWMIGSVADDNIVHLWEISK 366
Score = 74 (31.1 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 11 SVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGP 46
S+ + Y W+ +Y++++ L+WPSL+ +W P
Sbjct: 10 SIKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLP 45
Score = 63 (27.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 25/110 (22%), Positives = 48/110 (43%)
Query: 8 MERSVDDRYTQWKSL-VPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQFN 66
M V + W SL + L ++ + L+ L + A LS N
Sbjct: 25 MYEFVSETALMWPSLTIQWLPNYTTTNGLIDAKLLLGTHTSNQSANQLKVASTQLSADPN 84
Query: 67 EEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQ 116
+A S +K + + + E+ R R +PQ++ IVAT +V +++++ +
Sbjct: 85 VKANSK-IKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNLDTE 133
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 210 (79.0 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 42/130 (32%), Positives = 71/130 (54%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPA--VKVEKAHNADIHCVDW 247
++GH +VED+Q+ P+ F S D+ + +WD R+ + A + AHN D++ + W
Sbjct: 256 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISW 315
Query: 248 NPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
+ + +L+G D ++ ++D R+ S GSP+ F+ H A V V+W P S VF +S
Sbjct: 316 SRQEP-FLLSGGDDGALKVWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVFAAS 371
Query: 308 AEDGILNIWD 317
D + WD
Sbjct: 372 GADNQITQWD 381
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
H + +DW+P +LTG +IH++ S V F GH+ +V +QWS
Sbjct: 212 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDSGSWHVDQ--RPFVGHTRSVEDLQWS 269
Query: 298 PDKSSVFGSSAEDGILNIWD 317
P + +VF S + D + IWD
Sbjct: 270 PTEDTVFASCSADASIRIWD 289
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 210 (79.0 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 42/130 (32%), Positives = 72/130 (55%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPA--VKVEKAHNADIHCVDW 247
++GH +VED+Q+ P+ F S D+ + +WD R+ + A + AH+ D++ ++W
Sbjct: 257 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINW 316
Query: 248 NPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
+ H +L+G D ++ ++D R+ S GSP+ F+ H A V V+W P S VF +S
Sbjct: 317 S-HREPFLLSGGDDGALKVWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVFAAS 372
Query: 308 AEDGILNIWD 317
D + WD
Sbjct: 373 GADNQITQWD 382
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHK--FEGHSAAVLCVQ 295
H + +DW+P +LTG +IH++ +DG + + F GH+ +V +Q
Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWT----PTDGGSWHVDQRPFVGHTRSVEDLQ 268
Query: 296 WSPDKSSVFGSSAEDGILNIWD 317
WSP + +VF S + D + IWD
Sbjct: 269 WSPTEDTVFASCSADASIRIWD 290
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 209 (78.6 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 70/285 (24%), Positives = 131/285 (45%)
Query: 67 EEARSPFVKKFKTIIHPGEVNRIRELPQ-NSKIVATHTDSPDVLIWDVEAQPNRHAVLGA 125
EE + P + + H G VNR+R NS A+ ++ V IWD+ QP +
Sbjct: 145 EELKKPQMT-CALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDL-TQPLQAVENAQ 202
Query: 126 ADSHPDLDQSVVLWSIQDHVSALAAEPGSAK--STASGGANSKNASKSGGNGDKPLESPS 183
+ ++ +++ H + G A S ++ G + + + P+E +
Sbjct: 203 LAKQYEQSEARPVFTFGGH-----QQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGT 257
Query: 184 IGARGKYL-GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKV--EKAHNA 240
+ L GH +VED+Q+ P+ S D + +WD R+ A + E AH +
Sbjct: 258 WKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQS 317
Query: 241 DIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDK 300
D++ + WN ++ I +G D +H++D R+ S PI F+ H+ + V+WSP +
Sbjct: 318 DVNVISWNRNEP-FIASGGDDGYLHIWDLRQFQSK---KPIATFKHHTDHITTVEWSPAE 373
Query: 301 SSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLD 345
++V S +D + +WD + ++D + + PA + D+L+
Sbjct: 374 ATVLASGGDDDQIALWD---LAVEKDIDQA----VDPAQNEDVLN 411
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 207 (77.9 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 40/130 (30%), Positives = 72/130 (55%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPA--VKVEKAHNADIHCVDW 247
++GH +VED+Q+ P+ F S D+ + +WD R+ + A + AH+ D++ ++W
Sbjct: 251 FMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINW 310
Query: 248 NPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
+ + +L+G D ++ ++D R+ S GSP+ F+ H A + V+W P S VF +S
Sbjct: 311 SRREP-FLLSGGDDGALKIWDLRQFKS---GSPVATFKQHVAPITSVEWHPQDSGVFAAS 366
Query: 308 AEDGILNIWD 317
D + WD
Sbjct: 367 GADNQITQWD 376
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHK--FEGHSAAVLCVQ 295
H + +DW+P +LTG +IH++ +DG + + F GH+ +V +Q
Sbjct: 207 HMGEGFALDWSPRVSGRLLTGDCQKNIHLWT----PTDGGSWHVDQRPFMGHTRSVEDLQ 262
Query: 296 WSPDKSSVFGSSAEDGILNIWD 317
WSP + +VF S + D + IWD
Sbjct: 263 WSPTEDTVFASCSADASIRIWD 284
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 205 (77.2 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 41/130 (31%), Positives = 70/130 (53%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS--GSTPAVKVEKAHNADIHCVDW 247
++GH +VED+Q+ P+ F S D+ + +WD R+ G + AH+ D++ + W
Sbjct: 257 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISW 316
Query: 248 NPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
+ + +L+G D ++ ++D R+ S GSP+ F+ H A V V+W P S VF +S
Sbjct: 317 SRREP-FLLSGGDDGALKVWDLRQFKS---GSPVATFKQHMAPVTSVEWHPQDSGVFAAS 372
Query: 308 AEDGILNIWD 317
D + WD
Sbjct: 373 GADNQITQWD 382
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
H + +DW+P +LTG ++H++ + S V F GH+ +V +QWS
Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQ--RPFVGHTRSVEDLQWS 270
Query: 298 PDKSSVFGSSAEDGILNIWD 317
P + +VF S + D + IWD
Sbjct: 271 PTEDTVFASCSADASIRIWD 290
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 204 (76.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 41/130 (31%), Positives = 70/130 (53%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS--GSTPAVKVEKAHNADIHCVDW 247
++GH +VED+Q+ P+ F S D+ + +WD R+ G + AH+ D++ + W
Sbjct: 256 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISW 315
Query: 248 NPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
+ + +L+G D ++ ++D R+ S GSP+ F+ H A V V+W P S VF +S
Sbjct: 316 SRREP-FLLSGGDDGTLKVWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVFAAS 371
Query: 308 AEDGILNIWD 317
D + WD
Sbjct: 372 GADNQITQWD 381
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
H + +DW+P +LTG +IH++ S V F GH+ +V +QWS
Sbjct: 212 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQ--RPFVGHTRSVEDLQWS 269
Query: 298 PDKSSVFGSSAEDGILNIWD 317
P + +VF S + D + IWD
Sbjct: 270 PTEDTVFASCSADASIRIWD 289
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 203 (76.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 41/130 (31%), Positives = 71/130 (54%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPA--VKVEKAHNADIHCVDW 247
++GH +VED+Q+ P+ F S D+ + +WD R+ + A + AH+ D++ + W
Sbjct: 257 FVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISW 316
Query: 248 NPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
+ + +L+G D ++ ++D R+ S GSP+ F+ H A V V+W P S VF +S
Sbjct: 317 SRREP-FLLSGGDDGALKIWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVFAAS 372
Query: 308 AEDGILNIWD 317
D + WD
Sbjct: 373 GADHQITQWD 382
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHK--FEGHSAAVLCVQ 295
H + +DW+P +LTG +IH++ +DG + + F GH+ +V +Q
Sbjct: 213 HMGEGFALDWSPRVTGRLLTGDCQKNIHLWT----PTDGGSWHVDQRPFVGHTRSVEDLQ 268
Query: 296 WSPDKSSVFGSSAEDGILNIWD 317
WSP +++VF S + D + IWD
Sbjct: 269 WSPTENTVFASCSADASIRIWD 290
>UNIPROTKB|K7GKX8 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 EMBL:CU463287
Ensembl:ENSSSCT00000032853 Uniprot:K7GKX8
Length = 254
Score = 110 (43.8 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDL 132
I H GEVNR R +PQN I+AT T S DVL++D P + G + +PDL
Sbjct: 164 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDL 214
Score = 104 (41.7 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
ER +++ Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 57 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 103
Score = 72 (30.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 27/132 (20%), Positives = 57/132 (43%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
++ ++D D C S EF G + I + +K+ H +++ + P
Sbjct: 128 HIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECE--------IKIN--HEGEVNRARYMP 177
Query: 250 HDVNLILTGSADNSIHMFDRRKLTS--DGVG--SPIHKFEGHSAAVLCVQWSPDKSSVFG 305
+ ++I T + + + +FD K + D G +P + GH + W+ + S
Sbjct: 178 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 237
Query: 306 SSAEDGILNIWD 317
S+++D + +WD
Sbjct: 238 SASDDHTVCLWD 249
Score = 44 (20.5 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSG 227
GH+ + + + + S DD + LWD +G
Sbjct: 218 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG 253
>GENEDB_PFALCIPARUM|PFA0520c [details] [associations]
symbol:PFA0520c "chromatin assembly factor 1
protein WD40 domain, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 111 (44.1 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 27/112 (24%), Positives = 54/112 (48%)
Query: 215 DDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS 274
D+ ++++D R S + ++ V N L +GS + I ++D +K
Sbjct: 271 DNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALNTF-TGLFASGSDNGKIKVWDLKKFHE 329
Query: 275 DGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQD 326
P H H A++ + +SP+ +S+ S++ + +N++D KIGE+ D
Sbjct: 330 -----PQHIINAHKEAIIRLNFSPNDASILASASNNRFINVYDLNKIGEELD 376
Score = 110 (43.8 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 210 FCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDR 269
F S D+ + +WD + P + AH I ++++P+D +++ + S + I+++D
Sbjct: 310 FASGSDNGKIKVWDLKKFHEPQ-HIINAHKEAIIRLNFSPNDASILASASNNRFINVYDL 368
Query: 270 RKL--------TSDGVGSPIHKFEGHSAAVLCVQWSPDKS-SVF-GSSAEDGILNIW 316
K+ SDG I GH+ V W+ K +F GS++ED L W
Sbjct: 369 NKIGEELDAIDLSDGPSELIFSHGGHTQPVTDFNWNHHKKLKMFIGSTSEDNTLQFW 425
Score = 108 (43.1 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 26/107 (24%), Positives = 59/107 (55%)
Query: 232 VKVEKAHNADIHCVDWNPHDV-NLILTGSADNSIHMFD--RRKL-TSDGVGSPIHKFEGH 287
+K + AH +++ + + P + N ++T + D ++H+FD + K+ T D +P F G+
Sbjct: 145 IKSKIAHTGEVNRIKFVPLEKKNFVVTKAVDGNVHLFDINKHKIETVDDKMNPEVSFVGN 204
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEK--QDYGELKY 332
+ + + P K + + A DG++N++D+ + K Q + +++Y
Sbjct: 205 QSDGFGLDFQPIKKYIL-TCANDGLINVYDYNTLNTKTVQPFYKVQY 250
Score = 79 (32.9 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWG 45
E V+ ++ WK+ +LYD++ L WPSLS +G
Sbjct: 40 EEDVETQFNNWKTNSGLLYDFVCRKELEWPSLSVDFG 76
Score = 79 (32.9 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 29/89 (32%), Positives = 44/89 (49%)
Query: 46 PQLEQATYKNRQRLYLSEQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSK-IVATHTD 104
PQ E+ YK+ + Y F E + F K K I H GEVNRI+ +P K V T
Sbjct: 119 PQ-EKCIYKSNEN-YEGFDFCSEKKK-FTIKSK-IAHTGEVNRIKFVPLEKKNFVVTKAV 174
Query: 105 SPDVLIWDVEAQPNRHAVLGAADS-HPDL 132
+V ++D+ N+H + D +P++
Sbjct: 175 DGNVHLFDI----NKHKIETVDDKMNPEV 199
Score = 72 (30.4 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 33/140 (23%), Positives = 68/140 (48%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVK--VEKAHNADIHCVDW 247
++G++ + F P + + +D + ++D + +T V+ + + + ++ D
Sbjct: 201 FVGNQSDGFGLDFQPIK-KYILTCANDGLINVYDYNTLNTKTVQPFYKVQYKSPVN--DI 257
Query: 248 NP-HDVNLILTGSADNS-IHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFG 305
+P +D NLIL ADN I +FD R +++ P + G V V + + +F
Sbjct: 258 SPTNDPNLILA-CADNGYILIFDFRIKSNE----PAQQTLGQQVPVNTVALNTF-TGLFA 311
Query: 306 SSAEDGILNIWDHEKIGEKQ 325
S +++G + +WD +K E Q
Sbjct: 312 SGSDNGKIKVWDLKKFHEPQ 331
>UNIPROTKB|Q8I238 [details] [associations]
symbol:PFA_0520c "Chromatin assembly factor 1 protein WD40
domain, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0006334 "nucleosome assembly" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0051082 "unfolded protein
binding" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 111 (44.1 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 27/112 (24%), Positives = 54/112 (48%)
Query: 215 DDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS 274
D+ ++++D R S + ++ V N L +GS + I ++D +K
Sbjct: 271 DNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALNTF-TGLFASGSDNGKIKVWDLKKFHE 329
Query: 275 DGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQD 326
P H H A++ + +SP+ +S+ S++ + +N++D KIGE+ D
Sbjct: 330 -----PQHIINAHKEAIIRLNFSPNDASILASASNNRFINVYDLNKIGEELD 376
Score = 110 (43.8 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 210 FCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDR 269
F S D+ + +WD + P + AH I ++++P+D +++ + S + I+++D
Sbjct: 310 FASGSDNGKIKVWDLKKFHEPQ-HIINAHKEAIIRLNFSPNDASILASASNNRFINVYDL 368
Query: 270 RKL--------TSDGVGSPIHKFEGHSAAVLCVQWSPDKS-SVF-GSSAEDGILNIW 316
K+ SDG I GH+ V W+ K +F GS++ED L W
Sbjct: 369 NKIGEELDAIDLSDGPSELIFSHGGHTQPVTDFNWNHHKKLKMFIGSTSEDNTLQFW 425
Score = 108 (43.1 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 26/107 (24%), Positives = 59/107 (55%)
Query: 232 VKVEKAHNADIHCVDWNPHDV-NLILTGSADNSIHMFD--RRKL-TSDGVGSPIHKFEGH 287
+K + AH +++ + + P + N ++T + D ++H+FD + K+ T D +P F G+
Sbjct: 145 IKSKIAHTGEVNRIKFVPLEKKNFVVTKAVDGNVHLFDINKHKIETVDDKMNPEVSFVGN 204
Query: 288 SAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEK--QDYGELKY 332
+ + + P K + + A DG++N++D+ + K Q + +++Y
Sbjct: 205 QSDGFGLDFQPIKKYIL-TCANDGLINVYDYNTLNTKTVQPFYKVQY 250
Score = 79 (32.9 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 9 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWG 45
E V+ ++ WK+ +LYD++ L WPSLS +G
Sbjct: 40 EEDVETQFNNWKTNSGLLYDFVCRKELEWPSLSVDFG 76
Score = 79 (32.9 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 29/89 (32%), Positives = 44/89 (49%)
Query: 46 PQLEQATYKNRQRLYLSEQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSK-IVATHTD 104
PQ E+ YK+ + Y F E + F K K I H GEVNRI+ +P K V T
Sbjct: 119 PQ-EKCIYKSNEN-YEGFDFCSEKKK-FTIKSK-IAHTGEVNRIKFVPLEKKNFVVTKAV 174
Query: 105 SPDVLIWDVEAQPNRHAVLGAADS-HPDL 132
+V ++D+ N+H + D +P++
Sbjct: 175 DGNVHLFDI----NKHKIETVDDKMNPEV 199
Score = 72 (30.4 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 33/140 (23%), Positives = 68/140 (48%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVK--VEKAHNADIHCVDW 247
++G++ + F P + + +D + ++D + +T V+ + + + ++ D
Sbjct: 201 FVGNQSDGFGLDFQPIK-KYILTCANDGLINVYDYNTLNTKTVQPFYKVQYKSPVN--DI 257
Query: 248 NP-HDVNLILTGSADNS-IHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFG 305
+P +D NLIL ADN I +FD R +++ P + G V V + + +F
Sbjct: 258 SPTNDPNLILA-CADNGYILIFDFRIKSNE----PAQQTLGQQVPVNTVALNTF-TGLFA 311
Query: 306 SSAEDGILNIWDHEKIGEKQ 325
S +++G + +WD +K E Q
Sbjct: 312 SGSDNGKIKVWDLKKFHEPQ 331
>GENEDB_PFALCIPARUM|PF14_0314 [details] [associations]
symbol:PF14_0314 "chromatin assembly factor 1
p55 subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 140 (54.3 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 40/162 (24%), Positives = 74/162 (45%)
Query: 189 KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
KY H ++D C + SV ++ + ++D R+ + V A N ++ +D N
Sbjct: 234 KYFNHNIPLQD---CCWNDNNVLSVSENGHINIYDIRNKTV--VNSICATNCTLNSIDVN 288
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
PH+ N+ T + I ++D R T+ +H+ ++ ++W + + SS
Sbjct: 289 PHNKNIFATAGTNKEIDLWDMR-FTNKS----LHRIISQKETIIKLKWDKFQPGILSSST 343
Query: 309 EDGILNIWDHEKIGEKQDY-----GELKYPIIHPAYSSDMLD 345
D + +D KIG +Q Y G + IH +SS++LD
Sbjct: 344 SDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIHGGHSSNILD 385
Score = 99 (39.9 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 30/133 (22%), Positives = 55/133 (41%)
Query: 196 TVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLI 255
T+ + P + F + G + + LWD R + ++ I + W+ ++
Sbjct: 281 TLNSIDVNPHNKNIFATAGTNKEIDLWDMRFTNKSLHRIISQKETIIK-LKWDKFQPGIL 339
Query: 256 LTGSADNSIHMFDRRKL--------TSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
+ ++D I+ FD K+ + DG I GHS+ +L + S + S
Sbjct: 340 SSSTSDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIHGGHSSNILDYSLNNSYSMMISSI 399
Query: 308 AEDGILNIWDHEK 320
+ED L+IW K
Sbjct: 400 SEDNTLHIWQPSK 412
Score = 90 (36.7 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 33/141 (23%), Positives = 61/141 (43%)
Query: 212 SVGDDSCLILWDARSGST---PAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFD 268
S GDDS L +WD + P VK HN + WN ++V L+ S + I+++D
Sbjct: 210 SCGDDSYLCIWDMNTSDKIMHPIVKYFN-HNIPLQDCCWNDNNV---LSVSENGHINIYD 265
Query: 269 RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD--------HEK 320
R T ++ + + + +P ++F ++ + +++WD H
Sbjct: 266 IRNKTV------VNSICATNCTLNSIDVNPHNKNIFATAGTNKEIDLWDMRFTNKSLHRI 319
Query: 321 IGEKQDYGELKYPIIHPAYSS 341
I +K+ +LK+ P S
Sbjct: 320 ISQKETIIKLKWDKFQPGILS 340
Score = 64 (27.6 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 14 DRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
D Y W+ +LY+ + + WPSL W P++ YKN
Sbjct: 30 DNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLPKV----YKN 67
Score = 58 (25.5 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNR 119
I H E+N+I P+N+ IVA ++ I+++ N+
Sbjct: 132 IYHESEINKISCYPENADIVACFCSDGNINIFNINDYYNK 171
>UNIPROTKB|Q8ILD0 [details] [associations]
symbol:PF14_0314 "Chromatin assembly factor 1 P55 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 140 (54.3 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 40/162 (24%), Positives = 74/162 (45%)
Query: 189 KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
KY H ++D C + SV ++ + ++D R+ + V A N ++ +D N
Sbjct: 234 KYFNHNIPLQD---CCWNDNNVLSVSENGHINIYDIRNKTV--VNSICATNCTLNSIDVN 288
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
PH+ N+ T + I ++D R T+ +H+ ++ ++W + + SS
Sbjct: 289 PHNKNIFATAGTNKEIDLWDMR-FTNKS----LHRIISQKETIIKLKWDKFQPGILSSST 343
Query: 309 EDGILNIWDHEKIGEKQDY-----GELKYPIIHPAYSSDMLD 345
D + +D KIG +Q Y G + IH +SS++LD
Sbjct: 344 SDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIHGGHSSNILD 385
Score = 99 (39.9 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 30/133 (22%), Positives = 55/133 (41%)
Query: 196 TVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLI 255
T+ + P + F + G + + LWD R + ++ I + W+ ++
Sbjct: 281 TLNSIDVNPHNKNIFATAGTNKEIDLWDMRFTNKSLHRIISQKETIIK-LKWDKFQPGIL 339
Query: 256 LTGSADNSIHMFDRRKL--------TSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
+ ++D I+ FD K+ + DG I GHS+ +L + S + S
Sbjct: 340 SSSTSDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIHGGHSSNILDYSLNNSYSMMISSI 399
Query: 308 AEDGILNIWDHEK 320
+ED L+IW K
Sbjct: 400 SEDNTLHIWQPSK 412
Score = 90 (36.7 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 33/141 (23%), Positives = 61/141 (43%)
Query: 212 SVGDDSCLILWDARSGST---PAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFD 268
S GDDS L +WD + P VK HN + WN ++V L+ S + I+++D
Sbjct: 210 SCGDDSYLCIWDMNTSDKIMHPIVKYFN-HNIPLQDCCWNDNNV---LSVSENGHINIYD 265
Query: 269 RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD--------HEK 320
R T ++ + + + +P ++F ++ + +++WD H
Sbjct: 266 IRNKTV------VNSICATNCTLNSIDVNPHNKNIFATAGTNKEIDLWDMRFTNKSLHRI 319
Query: 321 IGEKQDYGELKYPIIHPAYSS 341
I +K+ +LK+ P S
Sbjct: 320 ISQKETIIKLKWDKFQPGILS 340
Score = 64 (27.6 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 14 DRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN 55
D Y W+ +LY+ + + WPSL W P++ YKN
Sbjct: 30 DNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLPKV----YKN 67
Score = 58 (25.5 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNR 119
I H E+N+I P+N+ IVA ++ I+++ N+
Sbjct: 132 IYHESEINKISCYPENADIVACFCSDGNINIFNINDYYNK 171
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 184 (69.8 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 40/135 (29%), Positives = 66/135 (48%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGS-TPAVKVEKAHNADIHCVDWN 248
+ GH +VE++Q+ P+ F S D + +WD RS S +PAV V K N D++ + W+
Sbjct: 299 FRGHASSVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNV-KISNTDVNVMTWS 357
Query: 249 PHDVNLILTGSADNSIHMFDRRKL----TSDG--VGSPIHKFEGHSAAVLCVQWSPDKSS 302
+L+ TG+ D ++D R +S SP+ F H + ++W P S
Sbjct: 358 KQTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDS 417
Query: 303 VFGSSAEDGILNIWD 317
V + D + +WD
Sbjct: 418 VIAVGSADNTVTLWD 432
Score = 149 (57.5 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 30/93 (32%), Positives = 54/93 (58%)
Query: 226 SGSTPAVKVEKAHNADIHCVDWNP-HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKF 284
S S P + + H ++ + +DW+P H + +LTG D I++ R + G + F
Sbjct: 243 SASKP-LSTLRMHKSEGYALDWSPLHPLGKLLTGDNDGLIYVTTRTE--GGGWVTDTRAF 299
Query: 285 EGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
GH+++V +QWSP++ +VF S++ DG + +WD
Sbjct: 300 RGHASSVEELQWSPNEKNVFASASSDGTVKVWD 332
Score = 38 (18.4 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 24 PVLYDWLANHNLVWPSLS 41
P YD L + WP LS
Sbjct: 93 PSTYDMLHTLSTPWPCLS 110
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 147 (56.8 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 42/144 (29%), Positives = 66/144 (45%)
Query: 190 YLGHEDTVEDVQFCPSSAQE---FCSVGDDSCLILWDARSGST---PAVKVEKAHNADIH 243
+ GH + D+ SS +E F SV DDS D R +T P + VE +H +
Sbjct: 251 FKGHHGAINDI----SSIKEKHLFGSVSDDSTTQFHDTRVNATDINPVITVENSHIQN-- 304
Query: 244 CVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSV 303
C+ ++P L TG DN + ++D R ++ P KF GH+ +V +QW + +
Sbjct: 305 CIQFHPDIQTLYATGGKDNVVSLYDIRNYST-----PFRKFYGHNDSVRQLQWDWNNPDI 359
Query: 304 FGSSAEDGILNIWDHEKIGEKQDY 327
S D + WD + + E Y
Sbjct: 360 LVSCGLDKRIIFWDLKNLDEDFTY 383
Score = 95 (38.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 26/108 (24%), Positives = 57/108 (52%)
Query: 210 FCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDR 269
F S +D+ + LW STP +++ K H+ I+ + + + +L + S D++ D
Sbjct: 227 FLSGSNDAQIALWQVDKSSTP-LQLFKGHHGAINDIS-SIKEKHLFGSVSDDSTTQFHDT 284
Query: 270 RKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
R +D +P+ E +S C+Q+ PD +++ + +D +++++D
Sbjct: 285 RVNATDI--NPVITVE-NSHIQNCIQFHPDIQTLYATGGKDNVVSLYD 329
Score = 77 (32.2 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 3 EGRKGMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGP 46
E ++ E+ V++ + WK VP+LYD++ L PSL +W P
Sbjct: 63 EEQQLQEKIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLP 106
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 147 (56.8 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 42/144 (29%), Positives = 66/144 (45%)
Query: 190 YLGHEDTVEDVQFCPSSAQE---FCSVGDDSCLILWDARSGST---PAVKVEKAHNADIH 243
+ GH + D+ SS +E F SV DDS D R +T P + VE +H +
Sbjct: 251 FKGHHGAINDI----SSIKEKHLFGSVSDDSTTQFHDTRVNATDINPVITVENSHIQN-- 304
Query: 244 CVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSV 303
C+ ++P L TG DN + ++D R ++ P KF GH+ +V +QW + +
Sbjct: 305 CIQFHPDIQTLYATGGKDNVVSLYDIRNYST-----PFRKFYGHNDSVRQLQWDWNNPDI 359
Query: 304 FGSSAEDGILNIWDHEKIGEKQDY 327
S D + WD + + E Y
Sbjct: 360 LVSCGLDKRIIFWDLKNLDEDFTY 383
Score = 95 (38.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 26/108 (24%), Positives = 57/108 (52%)
Query: 210 FCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDR 269
F S +D+ + LW STP +++ K H+ I+ + + + +L + S D++ D
Sbjct: 227 FLSGSNDAQIALWQVDKSSTP-LQLFKGHHGAINDIS-SIKEKHLFGSVSDDSTTQFHDT 284
Query: 270 RKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
R +D +P+ E +S C+Q+ PD +++ + +D +++++D
Sbjct: 285 RVNATDI--NPVITVE-NSHIQNCIQFHPDIQTLYATGGKDNVVSLYD 329
Score = 77 (32.2 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 3 EGRKGMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGP 46
E ++ E+ V++ + WK VP+LYD++ L PSL +W P
Sbjct: 63 EEQQLQEKIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLP 106
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 170 (64.9 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 44/129 (34%), Positives = 68/129 (52%)
Query: 189 KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
++ GHE+ + DV F S A+ S DD L LWD +GS +K H CV++N
Sbjct: 66 EFTGHENGISDVAFS-SDARFIVSASDDKTLKLWDVETGSL--IKTLIGHTNYAFCVNFN 122
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P N+I++GS D ++ ++D +T+ G + HS V V ++ D S + SS+
Sbjct: 123 PQS-NMIVSGSFDETVRIWD---VTT---GKCLKVLPAHSDPVTAVDFNRDGSLIV-SSS 174
Query: 309 EDGILNIWD 317
DG+ IWD
Sbjct: 175 YDGLCRIWD 183
>SGD|S000004738 [details] [associations]
symbol:RRB1 "Nuclear protein involved in early steps of
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004738 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0042254 EMBL:BK006946
GO:GO:0006364 InterPro:IPR022052 Pfam:PF12265 EMBL:Z48622
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4XWK6B PIR:S53061 RefSeq:NP_013850.1
ProteinModelPortal:Q04225 SMR:Q04225 DIP:DIP-6263N IntAct:Q04225
MINT:MINT-1168783 STRING:Q04225 PaxDb:Q04225 PeptideAtlas:Q04225
EnsemblFungi:YMR131C GeneID:855161 KEGG:sce:YMR131C CYGD:YMR131c
NextBio:978584 Genevestigator:Q04225 GermOnline:YMR131C
Uniprot:Q04225
Length = 511
Score = 168 (64.2 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 41/165 (24%), Positives = 85/165 (51%)
Query: 191 LGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGS-TPAVKVEKAHNADIHCVDWNP 249
+ + ++ED+Q+ + + F + G D + +WD RS PA+ V KA N D++ + W+
Sbjct: 318 VSNNKSIEDIQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISV-KASNTDVNVISWSD 376
Query: 250 HDVNLILTGSADNSIHMFDRRKLT---SDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
L+ +G + + ++D R+ T +D V P+ +++ H A+ + ++P S+
Sbjct: 377 KIGYLLASGDDNGTWGVWDLRQFTPSNADAV-QPVAQYDFHKGAITSIAFNPLDESIVAV 435
Query: 307 SAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLL 351
+ED + +WD + + D E+K A + ++ +I +LL
Sbjct: 436 GSEDNTVTLWD---LSVEADDEEIKQ---QAAETKELQEIPPQLL 474
Score = 49 (22.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 24 PVLYDWLANHNLVWPSLS 41
P +Y+ L N N+ WP L+
Sbjct: 115 PTVYEMLHNVNMPWPCLT 132
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 170 (64.9 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 57/218 (26%), Positives = 98/218 (44%)
Query: 110 IWDVE-AQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNA 168
++DV ++ N H ++ ++ D S+ +W I L + S +
Sbjct: 68 LFDVTWSENNEHVLITSSG-----DGSLQIWDIAKPKGPLQVYKEHTQEAYSVDWSQTRG 122
Query: 169 SKS--GGNGDKP--LESPSIGARGK-YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWD 223
+ G+ D+ L P++G + + GHE + + P F S D L +WD
Sbjct: 123 EQLVVSGSWDQTAKLWDPAVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWD 182
Query: 224 ARSGSTPAVK-VEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIH 282
++ P V+ V AH A+I DW +D NL++TG+ D S+ +D R V P+
Sbjct: 183 VKA---PGVRLVIPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDLRN-----VRQPVF 234
Query: 283 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEK 320
GH+ AV V++SP +++ S + D + WD K
Sbjct: 235 ILLGHTYAVRRVKFSPFHATLLASCSYDFTVRFWDFSK 272
Score = 142 (55.0 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 34/124 (27%), Positives = 56/124 (45%)
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP-HDVN 253
D + DV + ++ + D L +WD P ++V K H + + VDW+
Sbjct: 66 DGLFDVTWSENNEHVLITSSGDGSLQIWDIAKPKGP-LQVYKEHTQEAYSVDWSQTRGEQ 124
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
L+++GS D + ++D VG + F+GH + WSP F S++ D L
Sbjct: 125 LVVSGSWDQTAKLWD------PAVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTL 178
Query: 314 NIWD 317
IWD
Sbjct: 179 RIWD 182
>POMBASE|SPAC25H1.06 [details] [associations]
symbol:pcf3 "CAF assembly factor (CAF-1) complex subunit
C, Pcf3" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=IC] [GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0035067
"negative regulation of histone acetylation" evidence=IMP]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IMP]
[GO:0070829 "heterochromatin maintenance" evidence=IMP] [GO:0090053
"positive regulation of chromatin silencing at centromere"
evidence=IMP] [GO:0090055 "positive regulation of chromatin
silencing at silent mating-type cassette" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.06 GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0000790
GO:GO:0043596 GO:GO:0006335 GO:GO:0035067 GO:GO:0051574
GO:GO:0033186 KO:K10752 InterPro:IPR022052 Pfam:PF12265
GO:GO:0090055 HOGENOM:HOG000160330 OrthoDB:EOG44TSHP GO:GO:0070829
GO:GO:0090053 PIR:T38386 RefSeq:NP_593810.1
ProteinModelPortal:Q9Y825 STRING:Q9Y825 EnsemblFungi:SPAC25H1.06.1
GeneID:2541656 KEGG:spo:SPAC25H1.06 OMA:MESITEK NextBio:20802749
Uniprot:Q9Y825
Length = 408
Score = 87 (35.7 bits), Expect = 4.0e-10, Sum P(4) = 4.0e-10
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 6 KGMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYL 61
K +E + + + +WK LY+ L L WPSLS +W +E T K + RL L
Sbjct: 14 KFLENQISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLL 71
Score = 86 (35.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 23/82 (28%), Positives = 38/82 (46%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGS--PIHKFEGHSAAVLCVQ 295
HN D++ V P + N+I T S+ + ++FDR K TS P GH +
Sbjct: 130 HNGDVNRVRHMPQNPNIIATMSSCGNAYIFDRTKYTSMPAEEFLPNISLIGHKKEGFGLS 189
Query: 296 WSPDKSSVFGSSAEDGILNIWD 317
W+ ++ ++A D + WD
Sbjct: 190 WNRQQNCRLVTAANDSKILEWD 211
Score = 85 (35.0 bits), Expect = 4.0e-10, Sum P(4) = 4.0e-10
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWD 112
I+H G+VNR+R +PQN I+AT + + I+D
Sbjct: 128 ILHNGDVNRVRHMPQNPNIIATMSSCGNAYIFD 160
Score = 74 (31.1 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILW 222
+ GH+ TV +V F P AQ SV DD+ L +W
Sbjct: 369 HAGHKGTVNEVDFDPFEAQCIASVADDNELHIW 401
Score = 70 (29.7 bits), Expect = 4.0e-10, Sum P(4) = 4.0e-10
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 193 HEDT-VEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
++D+ V DV++ P + +V D+ + D R T + K KA N + V NP
Sbjct: 230 YDDSPVNDVEYHPHHTNLYIAVNDNGIAFICDNRLQQTCS-KTVKASNP-LFSVRHNPSI 287
Query: 252 VNLILTGSADNSIHMFDRRKL 272
L GS + + ++D R L
Sbjct: 288 ATLFALGS-EQDLQLWDLRNL 307
Score = 62 (26.9 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 205 SSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSI 264
S+ QE+C V W+ + P V H ++ VD++P + I + + DN +
Sbjct: 348 SACQEYCYV--------WNFNKAN-PLEFVHAGHKGTVNEVDFDPFEAQCIASVADDNEL 398
Query: 265 HMF 267
H++
Sbjct: 399 HIW 401
Score = 55 (24.4 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 17/82 (20%), Positives = 38/82 (46%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDG-VGSPIHKFEGHSAAVLCVQW 296
H + + WN ++T + D+ I +D + D +P+ F + V V++
Sbjct: 181 HKKEGFGLSWNRQQNCRLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEY 240
Query: 297 SPDKSSVFGSSAEDGILNIWDH 318
P ++++ + ++GI I D+
Sbjct: 241 HPHHTNLYIAVNDNGIAFICDN 262
Score = 52 (23.4 bits), Expect = 4.0e-10, Sum P(4) = 4.0e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 286 GHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
GH V V + P ++ S A+D L+IW
Sbjct: 371 GHKGTVNEVDFDPFEAQCIASVADDNELHIW 401
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 169 (64.5 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 45/151 (29%), Positives = 75/151 (49%)
Query: 173 GNGDKPLE--SPSIG-ARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGST 229
G+ D+ ++ P++G + + GHE + + P F S D L +WD +S T
Sbjct: 131 GSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKS--T 188
Query: 230 PAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSA 289
V AH A+I DW ++ NL++TG+ D S+ +D R V P+ + GH+
Sbjct: 189 GVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRN-----VRQPVFELLGHTY 243
Query: 290 AVLCVQWSPDKSSVFGSSAEDGILNIWDHEK 320
A+ V++SP +SV S + D + W+ K
Sbjct: 244 AIRRVKFSPFHASVLASCSYDFTVRFWNFSK 274
Score = 155 (59.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP-HDVN 253
D + DV + ++ + D L LWD + P ++V K H +++ VDW+
Sbjct: 68 DGLFDVTWSENNEHILVTCSGDGSLQLWDTAKATGP-LQVYKEHTQEVYSVDWSQTRGEQ 126
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
L+++GS D ++ ++D VG + F GH + + WSP F S++ D L
Sbjct: 127 LVVSGSWDQTVKLWDPT------VGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTL 180
Query: 314 NIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
IWD + G + I+ PA+ +++L +
Sbjct: 181 RIWDVKSTGVR---------IVVPAHQAEILSCD 205
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 168 (64.2 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS-GSTPAVKVEKAHNADIHCVDWN 248
++GH D + +F P A F SV D L LW++ P + +E AH ++ C DW+
Sbjct: 163 FVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKPLMSIE-AHASEALCCDWS 221
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSA--AVLCVQWSPDKSSVFGS 306
D N+++TG +D I +D RK+ + H FE +S AV + SP ++V S
Sbjct: 222 HFDRNVLVTGGSDGLIRGWDLRKMRT-------HVFELYSGEFAVRRLACSPHSAAVLAS 274
Query: 307 SAEDGILNIWDHEKIGE 323
+ D IW+ E+ GE
Sbjct: 275 ANYDFTTRIWNLER-GE 290
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 40/168 (23%), Positives = 79/168 (47%)
Query: 160 SGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCL 219
+GG + ++ + S+G + L D + DV +CP +A + D L
Sbjct: 37 AGGGSLFLLEQNSNTNSSSTDGQSLGELCR-LEWSDGLFDVAWCPYAADIAATASGDGSL 95
Query: 220 ILW---DARSGST------PAVKVEKAHNADIHCVDWNPH-DVNLILTGSADNSIHMFDR 269
+W D S S P + +++ H +++ +DW + + +L+GS D ++ ++D
Sbjct: 96 QIWCGLDGESASNQLTPKQPLICLQE-HKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDC 154
Query: 270 RKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
+ S I F GH+ + ++SP +++F S + DG LN+W+
Sbjct: 155 NRQNS------ITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWN 196
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 167 (63.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 54/217 (24%), Positives = 96/217 (44%)
Query: 110 IWDVE-AQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNA 168
++DV ++ N H ++ + D S+ LW L A+ S +
Sbjct: 70 LFDVTWSENNEHVLITCSG-----DGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRG 124
Query: 169 SKS--GGNGDKPLE--SPSIG-ARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWD 223
+ G+ D+ ++ P++G + + GHE + + P F S D L +WD
Sbjct: 125 EQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWD 184
Query: 224 ARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHK 283
++ V AH A+I DW ++ NL++TG+ D S+ +D R V P+ +
Sbjct: 185 VKAAGVRIVI--PAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRN-----VRQPVFE 237
Query: 284 FEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEK 320
GH+ A+ V++SP +SV S + D + W+ K
Sbjct: 238 LLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 274
Score = 152 (58.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP-HDVN 253
D + DV + ++ + D L LWD + P ++V K H +++ VDW+
Sbjct: 68 DGLFDVTWSENNEHVLITCSGDGSLQLWDTAKAAGP-LQVYKEHAQEVYSVDWSQTRGEQ 126
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
L+++GS D ++ ++D VG + F GH + + WSP F S++ D L
Sbjct: 127 LVVSGSWDQTVKLWDPT------VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTL 180
Query: 314 NIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
IWD + G + I+ PA+ +++L +
Sbjct: 181 RIWDVKAAGVR---------IVIPAHQAEILSCD 205
>CGD|CAL0001341 [details] [associations]
symbol:orf19.6355 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 163 (62.4 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 33/131 (25%), Positives = 67/131 (51%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGS-TPAVKVEKAHNADIHCVDWN 248
+ + ++ED+Q+ F + G D + +WD RS PA+ V A +D++ + W+
Sbjct: 323 FFASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVI-ASKSDVNVISWS 381
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVG--SPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
+L+ +G D S ++D R T++ SP+ ++ H + + + ++P S+
Sbjct: 382 SKINHLLASGHDDGSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPLDESIIAV 441
Query: 307 SAEDGILNIWD 317
S+ED + +WD
Sbjct: 442 SSEDNTVTLWD 452
Score = 51 (23.0 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 24 PVLYDWLANHNLVWPSLS 41
P +Y+ L N NL WP L+
Sbjct: 120 PTVYEMLHNINLPWPCLT 137
>UNIPROTKB|Q59PD8 [details] [associations]
symbol:RRB1 "Likely nucleolar ribosome biogenesis factor
Rrb1p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 163 (62.4 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 33/131 (25%), Positives = 67/131 (51%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGS-TPAVKVEKAHNADIHCVDWN 248
+ + ++ED+Q+ F + G D + +WD RS PA+ V A +D++ + W+
Sbjct: 323 FFASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVI-ASKSDVNVISWS 381
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVG--SPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
+L+ +G D S ++D R T++ SP+ ++ H + + + ++P S+
Sbjct: 382 SKINHLLASGHDDGSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPLDESIIAV 441
Query: 307 SAEDGILNIWD 317
S+ED + +WD
Sbjct: 442 SSEDNTVTLWD 452
Score = 51 (23.0 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 24 PVLYDWLANHNLVWPSLS 41
P +Y+ L N NL WP L+
Sbjct: 120 PTVYEMLHNINLPWPCLT 137
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 167 (63.8 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 189 KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
+Y GH + D+ + S + CS DD L +WDARS +KV + H + CV++N
Sbjct: 80 RYEGHSSGISDLAWS-SDSHYTCSASDDCTLRIWDARS-PYECLKVLRGHTNFVFCVNFN 137
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P NLI++GS D +I +++ + G + + HS + V ++ D S + S++
Sbjct: 138 PPS-NLIVSGSFDETIRIWEVK------TGKCVRMIKAHSMPISSVHFNRDGSLIV-SAS 189
Query: 309 EDGILNIWD 317
DG IWD
Sbjct: 190 HDGSCKIWD 198
Score = 123 (48.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 39/166 (23%), Positives = 74/166 (44%)
Query: 152 PGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFC 211
P T++G AN+ + +G +G+ P+ P + GH + V+F +
Sbjct: 2 PSGGNGTSNGVANANSTGNAGTSGNVPIYKPYRHLK-TLEGHTAAISCVKFS-NDGNLLA 59
Query: 212 SVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRK 271
S D +ILW A + S + + H++ I + W+ D + + S D ++ ++D R
Sbjct: 60 SASVDKTMILWSATNYSL--IHRYEGHSSGISDLAWSS-DSHYTCSASDDCTLRIWDARS 116
Query: 272 LTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
+ GH+ V CV ++P S++ S + D + IW+
Sbjct: 117 PYEC-----LKVLRGHTNFVFCVNFNPP-SNLIVSGSFDETIRIWE 156
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 166 (63.5 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 44/152 (28%), Positives = 76/152 (50%)
Query: 173 GNGDKPLE--SPSIG-ARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGST 229
G+ D+ ++ P++G + + GHE + + P F S D L +WD + T
Sbjct: 126 GSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK---T 182
Query: 230 PAVKVE-KAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHS 288
V++ AH A+I DW ++ NL++TG+ D S+ +D R V P+ + GH+
Sbjct: 183 TGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRN-----VRQPVFELLGHT 237
Query: 289 AAVLCVQWSPDKSSVFGSSAEDGILNIWDHEK 320
A+ V++SP +SV S + D + W+ K
Sbjct: 238 YAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 269
Score = 162 (62.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 41/154 (26%), Positives = 74/154 (48%)
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP-HDVN 253
D + DV + ++ + D L LWD + P ++V K H +++ VDW+ D
Sbjct: 63 DGLFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGP-LQVYKEHTQEVYSVDWSQTRDEQ 121
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
L+++GS D ++ ++D VG+ + F GH + + WSP F S++ D L
Sbjct: 122 LVVSGSWDQTVKVWDPT------VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTL 175
Query: 314 NIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
IWD + G + I+ PA+ +++L +
Sbjct: 176 RIWDVKTTGVR---------IVIPAHQAEILSCD 200
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 166 (63.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 45/152 (29%), Positives = 76/152 (50%)
Query: 173 GNGDKPLE--SPSIG-ARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGST 229
G+ D+ ++ P++G + + GHE + + P F S D L +WD + T
Sbjct: 131 GSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVK---T 187
Query: 230 PAVK-VEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHS 288
V+ V AH A+I DW ++ NL++TG+ D S+ +D R V P+ + GH+
Sbjct: 188 TGVRIVVPAHQAEILSCDWCKYNENLVVTGAVDCSLRGWDLRN-----VQQPVFELLGHT 242
Query: 289 AAVLCVQWSPDKSSVFGSSAEDGILNIWDHEK 320
A+ V++SP +SV S + D + W+ K
Sbjct: 243 YAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 274
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 41/154 (26%), Positives = 72/154 (46%)
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP-HDVN 253
D + DV + ++ + D L LWD + P ++V K H +++ VDW+
Sbjct: 68 DGLFDVTWSENNEHVLVTCSGDGSLQLWDTARATGP-LQVFKEHTQEVYSVDWSQTRGEQ 126
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
L+++GS D ++ ++D VG + F GH + + WSP F SS+ D L
Sbjct: 127 LVVSGSWDQTVKLWDPT------VGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTL 180
Query: 314 NIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
IWD + G + I+ PA+ +++L +
Sbjct: 181 RIWDVKTTGVR---------IVVPAHQAEILSCD 205
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 68/245 (27%), Positives = 109/245 (44%)
Query: 95 NSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEP-- 152
+S+++A+ +D V IWD E +H + G H DL +SV+ +S + A A++
Sbjct: 307 DSRLLASASDDRTVKIWDTETGSLQHTLEG----HSDLVRSVI-FSHDSRLLASASDSTV 361
Query: 153 -------GSAKSTASG----------GANSKNASKSGGNGDKPLESPSIGARGKYL-GHE 194
GS + T G +S+ + + + + G+ L GH
Sbjct: 362 KIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHR 421
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNL 254
D V V F S Q S DDS + +WD +GS + H + V ++ HD L
Sbjct: 422 DWVRSVIFSHDS-QLLASASDDSTVKIWDTGTGSLQHTL--EGHRDWVRSVIFS-HDSRL 477
Query: 255 ILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILN 314
+ + S D ++ ++D K GS H EGHS+ V V +S D S + S++ D +
Sbjct: 478 LASASDDRTVRIWDTEK------GSHKHTLEGHSSLVTSVSFSHD-SRLLASASNDQTVR 530
Query: 315 IWDHE 319
IWD E
Sbjct: 531 IWDIE 535
Score = 146 (56.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 44/133 (33%), Positives = 64/133 (48%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH D V V F S Q S DDS + +WD +GS + H + V ++ HD
Sbjct: 377 GHRDWVRSVIFSHDS-QLLASASDDSTVKIWDTGTGSLQHTL--EGHRDWVRSVIFS-HD 432
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
L+ + S D+++ ++D G GS H EGH V V +S D S + S+++D
Sbjct: 433 SQLLASASDDSTVKIWDT------GTGSLQHTLEGHRDWVRSVIFSHD-SRLLASASDDR 485
Query: 312 ILNIWDHEKIGEK 324
+ IWD EK K
Sbjct: 486 TVRIWDTEKGSHK 498
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 45/152 (29%), Positives = 76/152 (50%)
Query: 173 GNGDKPLE--SPSIG-ARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGST 229
G+ D+ ++ P++G + + GHE + + P F S D L +WD + T
Sbjct: 131 GSWDQTVKLWDPTVGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVK---T 187
Query: 230 PAVK-VEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHS 288
V+ V AH A+I DW ++ NL++TG+ D S+ +D R V P+ + GH+
Sbjct: 188 TGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRN-----VRQPVFELLGHT 242
Query: 289 AAVLCVQWSPDKSSVFGSSAEDGILNIWDHEK 320
A+ V++SP +SV S + D + W+ K
Sbjct: 243 YAIRRVKFSPFYASVLASCSYDFTVRFWNFSK 274
Score = 156 (60.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP-HDVN 253
D + DV + ++ + D L LWD + P ++V K H +++ VDW+
Sbjct: 68 DALFDVTWSENNEHVLVTCSGDGSLQLWDTAGAAGP-LQVYKEHTQEVYSVDWSQTRGEQ 126
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
L+++GS D ++ ++D VG + F+GH + + WSP F S++ D L
Sbjct: 127 LVVSGSWDQTVKLWDPT------VGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTL 180
Query: 314 NIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
IWD + G + I+ PA+ +++L +
Sbjct: 181 RIWDVKTTGVR---------IVVPAHQAEILSCD 205
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 163 ANSKNASKSGGNGD--KPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLI 220
+N++N +G +G K +S + H ++V D+ FC + + FCS DD+ +
Sbjct: 16 SNNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHRESVRDLSFCRTDLK-FCSCSDDTTVK 74
Query: 221 LWD-ARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGS 279
+WD AR ++ H D+ VDW+P +L+++G D + ++D + G
Sbjct: 75 VWDFARCQEERSLT---GHGWDVKSVDWHPTK-SLLVSGGKDYLVKLWDAKS------GR 124
Query: 280 PIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDY 327
+ F GH V CV+W+ + + V +S +D I+ ++D + E + +
Sbjct: 125 ELRSFHGHKNIVQCVKWNQNGNWVLTAS-KDQIIKLYDIRSMKELESF 171
Score = 145 (56.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 40/130 (30%), Positives = 59/130 (45%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH V+ V + P+ + S G D + LWDA+SG ++ H + CV WN +
Sbjct: 89 GHGWDVKSVDWHPTKSL-LVSGGKDYLVKLWDAKSGRE--LRSFHGHKNIVQCVKWNQNG 145
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
N +LT S D I ++D R + + F GH+ V + W P F S + DG
Sbjct: 146 -NWVLTASKDQIIKLYDIRSMKE------LESFRGHNKDVTALAWHPFHEEYFVSGSYDG 198
Query: 312 ILNIW--DHE 319
+ W HE
Sbjct: 199 AIFHWLVGHE 208
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 163 (62.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 43/152 (28%), Positives = 75/152 (49%)
Query: 173 GNGDKPLE--SPSIG-ARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGST 229
G+ D+ ++ P++G + + GHE + + P F S D L +WD + T
Sbjct: 126 GSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK---T 182
Query: 230 PAVKVE-KAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHS 288
V++ AH +I DW ++ NL++TG+ D S+ +D R V P+ + GH+
Sbjct: 183 TGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRN-----VRQPVFELLGHT 237
Query: 289 AAVLCVQWSPDKSSVFGSSAEDGILNIWDHEK 320
A+ V++SP +SV S + D + W+ K
Sbjct: 238 YAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 269
Score = 155 (59.6 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP-HDVN 253
D + DV + ++ + D L LWD + P ++V K H +++ VDW+
Sbjct: 63 DGLFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGP-LQVYKEHTQEVYSVDWSQTRGEQ 121
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
L+++GS D ++ ++D VG+ + F GH + + WSP F S++ D L
Sbjct: 122 LVVSGSWDQTVKVWDPT------VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTL 175
Query: 314 NIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
IWD + G + I+ PA+ +++L +
Sbjct: 176 RIWDVKTTGVR---------IVIPAHQTEILSCD 200
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 163 (62.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 43/152 (28%), Positives = 75/152 (49%)
Query: 173 GNGDKPLE--SPSIG-ARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGST 229
G+ D+ ++ P++G + + GHE + + P F S D L +WD + T
Sbjct: 126 GSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK---T 182
Query: 230 PAVKVE-KAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHS 288
V++ AH +I DW ++ NL++TG+ D S+ +D R V P+ + GH+
Sbjct: 183 AGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRN-----VRQPVFELLGHT 237
Query: 289 AAVLCVQWSPDKSSVFGSSAEDGILNIWDHEK 320
A+ V++SP +SV S + D + W+ K
Sbjct: 238 YAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 269
Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP-HDVN 253
D + DV + + + D L LWD + P ++V K H +++ VDW+
Sbjct: 63 DGLFDVTWSEDNEHVLVTCSGDGSLQLWDTAKATGP-LQVYKEHTQEVYSVDWSQTRGEQ 121
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
L+++GS D ++ ++D VG+ + F GH + + WSP F S++ D L
Sbjct: 122 LVVSGSWDQTVKVWDPT------VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTL 175
Query: 314 NIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
IWD + G + I+ PA+ +++L +
Sbjct: 176 RIWDVKTAGVR---------IVIPAHQTEILSCD 200
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 152 (58.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 52/179 (29%), Positives = 82/179 (45%)
Query: 145 VSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL-GHEDTVEDVQFC 203
V A P S +S A GG +S S N + P++ + L GH+ V Q+
Sbjct: 110 VMTCAFSP-SGQSVACGGLDSVC---SIFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYV 165
Query: 204 PSSAQEFC-SVGDDSCLILWDARSGSTPAV---KVEKAHNADIHCVDWNPHDVNLILTGS 259
P S GD +C +LWD +G +V + + H AD+ V + + L ++GS
Sbjct: 166 PDEDTHLITSSGDQTC-VLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGS 224
Query: 260 ADNSIHMFDRRKLTSDGVGSPIHK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
D + ++D R V S + F GH V V++ PD + FG+ +EDG ++D
Sbjct: 225 CDTTARLWDTR------VASRAQRTFYGHEGDVNTVKFFPDGNR-FGTGSEDGTCRLFD 276
Score = 53 (23.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAV 122
H G+V + P+ ++IV+ D +++W+ HA+
Sbjct: 64 HTGKVYSLDWTPEKNRIVSASQDGR-LIVWNALTSQKTHAI 103
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 161 (61.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 36/130 (27%), Positives = 64/130 (49%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNAD---IHCVDWN 248
GHE ++ D+ F + S G+D ++ W + + + K N + I+ +DW+
Sbjct: 202 GHESSIWDLAF-NKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWS 260
Query: 249 PHDVNLILTGSADNSIHMFDRRKL-TSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
N I+TGSAD+SI +++ T D + K H + V C +W+P ++ S
Sbjct: 261 SL-TNTIVTGSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASC 319
Query: 308 AEDGILNIWD 317
+DG + IW+
Sbjct: 320 GDDGFIKIWE 329
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 37/163 (22%), Positives = 70/163 (42%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGST-PAVKVEKAHNADIHCVDWNPH 250
GH V+ V + S+ + D + +W + + + H DI CV W+P+
Sbjct: 113 GHTYEVKSVAW-DSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPN 171
Query: 251 DVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAED 310
+ L+ + S D++I + DG I+ GH +++ + ++ D + S ED
Sbjct: 172 E-ELLASSSYDDTIKFWK----DIDGDWECINTLTGHESSIWDLAFNKDGDKLV-SCGED 225
Query: 311 GILNIWDHEKIGEKQ-DYGELKYPIIHPAYSSDMLDIETKLLT 352
++ W +K EK + + K P YS D + ++T
Sbjct: 226 KLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVT 268
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 162 (62.1 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 77/305 (25%), Positives = 130/305 (42%)
Query: 38 PSLSCRWGPQL----------EQATYKNRQRLYLSEQFNEEAR--SPFVKKFKTII--HP 83
P + WGP+L E T+ RL S + + P K + H
Sbjct: 24 PKVEDNWGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHS 83
Query: 84 GEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQD 143
V + P N +++A+ + + +W+ + +H + G H D +SV +S
Sbjct: 84 SSVQSVAFSP-NGQLLASGSSDTTIKLWNSASDSLKHTMEG----HSDRVESVA-FSPNG 137
Query: 144 HVSALAAEPGSAKSTASGGAN---SKNASKSG-----GNGDKPL---ESPSIGARGKYLG 192
+ A GS K T G ++ S S G G+ +K + +S + G + G
Sbjct: 138 QLWNPAI--GSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGG 195
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H + V + F P + S +D+ + LWD SGS + H+ I + ++P+
Sbjct: 196 HSNWVLPLVFSPDG-RLLASGSNDATIKLWDPPSGSLKHTL--EGHSNKIESLAFSPNG- 251
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGI 312
L+ +GS+D +I ++D GS H +GHS VL V +SPD S + S + D
Sbjct: 252 QLLASGSSDATIKLWDT------ATGSFRHTLKGHSDMVLSVVFSPD-SQLLESGSGDNT 304
Query: 313 LNIWD 317
+ +WD
Sbjct: 305 IKLWD 309
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 159 (61.0 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 57/185 (30%), Positives = 91/185 (49%)
Query: 146 SALAAEPG-SAKSTASGGANSKNASKSGGNGDKPLESPSI-------GAR-GKY----LG 192
S+L+ +P + K T +G + +A K NG+ L S S GA GK+ G
Sbjct: 54 SSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTISG 112
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H+ + DV + S ++ S DD L +W+ +G + +K K H+ + C ++NP
Sbjct: 113 HKLGISDVAWS-SDSRLLVSGSDDKTLKVWELSTGKS--LKTLKGHSNYVFCCNFNPQS- 168
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGI 312
NLI++GS D S+ ++D R G + HS V V ++ D S + SS+ DG+
Sbjct: 169 NLIVSGSFDESVRIWDVR------TGKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYDGL 221
Query: 313 LNIWD 317
IWD
Sbjct: 222 CRIWD 226
Score = 134 (52.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 40/167 (23%), Positives = 72/167 (43%)
Query: 152 PGSAKSTASGGANSKNASKSGGNGDKPLE-SPSIGARGKYLGHEDTVEDVQFCPSSAQEF 210
P S + + G + +S S + L P+ + GH V V+F P+ +
Sbjct: 29 PNSLQPNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNG-EWL 87
Query: 211 CSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRR 270
S D + +W A G K H I V W+ D L+++GS D ++ +++
Sbjct: 88 ASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKVWE-- 142
Query: 271 KLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
L++ G + +GHS V C ++P + + S ++ + IWD
Sbjct: 143 -LST---GKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV-RIWD 184
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 47/187 (25%), Positives = 85/187 (45%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+D V D+ F PS + S D L +WD ++V H ++C +P D
Sbjct: 151 GHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP-D 208
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+++ + + + S+ ++ R T I K EGH ++V+ +SPD + + +S +
Sbjct: 209 CSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDTN 262
Query: 312 ILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTMVK 371
++ +WD GE+ L + + PA D D+ L S+ G L + +
Sbjct: 263 VI-MWD-PYTGER--LRSLHHTQVDPAM--DDSDVHISSLRSVCFSP-EGLYLATVADDR 315
Query: 372 VLEIWRM 378
+L IW +
Sbjct: 316 LLRIWAL 322
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 47/187 (25%), Positives = 85/187 (45%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+D V D+ F PS + S D L +WD ++V H ++C +P D
Sbjct: 153 GHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP-D 210
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+++ + + + S+ ++ R T I K EGH ++V+ +SPD + + +S +
Sbjct: 211 CSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDTN 264
Query: 312 ILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTMVK 371
++ +WD GE+ L + + PA D D+ L S+ G L + +
Sbjct: 265 VI-MWD-PYTGER--LRSLHHTQVDPAM--DDSDVHISSLRSVCFSP-EGLYLATVADDR 317
Query: 372 VLEIWRM 378
+L IW +
Sbjct: 318 LLRIWAL 324
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + DV + S + S DD L +WD SG +K K H+ + C ++NP
Sbjct: 59 GHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQS 115
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
NLI++GS D S+ ++D + G + HS V V ++ D S + SS+ DG
Sbjct: 116 -NLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYDG 167
Query: 312 ILNIWD 317
+ IWD
Sbjct: 168 LCRIWD 173
Score = 125 (49.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 35/136 (25%), Positives = 61/136 (44%)
Query: 182 PSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNAD 241
P+ + GH V V+F P+ + S D + +W A G K H
Sbjct: 7 PNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFE--KTISGHKLG 63
Query: 242 IHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKS 301
I V W+ D NL+++ S D ++ ++D ++S G + +GHS V C ++P +
Sbjct: 64 ISDVAWSS-DSNLLVSASDDKTLKIWD---VSS---GKCLKTLKGHSNYVFCCNFNPQSN 116
Query: 302 SVFGSSAEDGILNIWD 317
+ S ++ + IWD
Sbjct: 117 LIVSGSFDESV-RIWD 131
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 47/187 (25%), Positives = 85/187 (45%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+D V D+ F PS + S D L +WD ++V H ++C +P D
Sbjct: 168 GHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP-D 225
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+++ + + + S+ ++ R T I K EGH ++V+ +SPD + + +S +
Sbjct: 226 CSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDTN 279
Query: 312 ILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTMVK 371
++ +WD GE+ L + + PA D D+ L S+ G L + +
Sbjct: 280 VI-MWD-PYTGER--LRSLHHTQVDPAM--DDSDVHISSLRSVCFSP-EGLYLATVADDR 332
Query: 372 VLEIWRM 378
+L IW +
Sbjct: 333 LLRIWAL 339
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 63/243 (25%), Positives = 100/243 (41%)
Query: 77 FKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDL-DQS 135
F T ++ + + +VA + +WD+ A+ + A GA + D DQS
Sbjct: 345 FYTFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDM-AKIGQ-AGSGALQAENDSSDQS 402
Query: 136 VVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGK-YLGHE 194
+ + + + L G S S S + L S + A Y GH
Sbjct: 403 IGPNGRRSY-TLLLGHSGPVYSATFSPPGDFVLSSSADTTIR-LWSTKLNANLVCYKGHN 460
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNL 254
V D QF P F S D +W + P +++ H +D+ CV W+P+ N
Sbjct: 461 YPVWDAQFSPFG-HYFASCSHDRTARIW-SMDRIQP-LRIMAGHLSDVDCVQWHPN-CNY 516
Query: 255 ILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILN 314
I TGS+D ++ ++D + G + F GH + VL + SPD S EDG +
Sbjct: 517 IATGSSDKTVRLWDVQ------TGECVRIFIGHRSMVLSLAMSPD-GRYMASGDEDGTIM 569
Query: 315 IWD 317
+WD
Sbjct: 570 MWD 572
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ T+ QF PS++ + D LWD + TP + K H + CV W P D
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDT-QTP-IATMKGHTNWVSCVAWAP-D 188
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPI-HKFEGHSAAVLCVQW-----SPDKSS-VF 304
++I TGS DN+I +D +K GSPI H+ ++ + W +PD +
Sbjct: 189 ASIIATGSMDNTIRFWDPKK------GSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLL 242
Query: 305 GSSAEDGILNIWD 317
S ++D + IW+
Sbjct: 243 ASGSKDNTVRIWN 255
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 47/186 (25%), Positives = 78/186 (41%)
Query: 133 DQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLG 192
D+++ +W +D L G A ++++ +SG + S +
Sbjct: 289 DKTIRIWDAKDG-KCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDERR--- 344
Query: 193 HEDTVEDVQFC-PSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
E + C S + S DD LILWD + + P K+ H ++ ++P D
Sbjct: 345 --KAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMH-GHQKVVNHASFSP-D 400
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
I T S D+S+ ++D + G + GH AAV WS D S + SS++D
Sbjct: 401 GRCIATASFDSSVRLWDGK------TGKFLATLRGHVAAVYQCAWSTD-SRLLVSSSQDT 453
Query: 312 ILNIWD 317
L +WD
Sbjct: 454 TLKVWD 459
Score = 116 (45.9 bits), Expect = 0.00097, P = 0.00097
Identities = 36/133 (27%), Positives = 64/133 (48%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP- 249
GH + V V + P ++ + G D+ + WD + GS P + H I + W P
Sbjct: 175 GHTNWVSCVAWAPDAS--IIATGSMDNTIRFWDPKKGS-PIGDALRRHTKPIMALCWQPL 231
Query: 250 H---DVN--LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVF 304
H D L+ +GS DN++ +++ + T + GH+A + CV+W ++ ++
Sbjct: 232 HLAPDSGPYLLASGSKDNTVRIWNVKLRTL------LFTLSGHTAPITCVRWG-GQNWIY 284
Query: 305 GSSAEDGILNIWD 317
SS+ D + IWD
Sbjct: 285 -SSSYDKTIRIWD 296
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + DV + S + S DD L +WD SG +K K H+ + C ++NP
Sbjct: 85 GHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQS 141
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
NLI++GS D S+ ++D + G + HS V V ++ D S + SS+ DG
Sbjct: 142 -NLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYDG 193
Query: 312 ILNIWD 317
+ IWD
Sbjct: 194 LCRIWD 199
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/163 (24%), Positives = 71/163 (43%)
Query: 156 KSTASGGANSKNASKSGGNGDKPLE-SPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVG 214
K + + +++ S N KP P+ + GH V V+F P+ + S
Sbjct: 6 KKPETEASKTQSTPSSSNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNG-EWLASSS 64
Query: 215 DDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS 274
D + +W A G K H I V W+ D NL+++ S D ++ ++D ++S
Sbjct: 65 ADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWD---VSS 118
Query: 275 DGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
G + +GHS V C ++P + + S ++ + IWD
Sbjct: 119 ---GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV-RIWD 157
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + DV + S + S DD L +WD SG +K K H+ + C ++NP
Sbjct: 85 GHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQS 141
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
NLI++GS D S+ ++D + G + HS V V ++ D S + SS+ DG
Sbjct: 142 -NLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYDG 193
Query: 312 ILNIWD 317
+ IWD
Sbjct: 194 LCRIWD 199
Score = 134 (52.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 40/163 (24%), Positives = 70/163 (42%)
Query: 156 KSTASGGANSKNASKSGGNGDKPLE-SPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVG 214
K + A ++ A + KP P+ + GH V V+F P+ + S
Sbjct: 6 KKPETEAARAQPAPSAAATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSS 64
Query: 215 DDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS 274
D + +W A G K H I V W+ D NL+++ S D ++ ++D ++S
Sbjct: 65 ADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWD---VSS 118
Query: 275 DGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
G + +GHS V C ++P + + S ++ + IWD
Sbjct: 119 ---GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV-RIWD 157
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + DV + S + S DD L +WD SG +K K H+ + C ++NP
Sbjct: 85 GHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQS 141
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
NLI++GS D S+ ++D + G + HS V V ++ D S + SS+ DG
Sbjct: 142 -NLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYDG 193
Query: 312 ILNIWD 317
+ IWD
Sbjct: 194 LCRIWD 199
Score = 133 (51.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 40/163 (24%), Positives = 69/163 (42%)
Query: 156 KSTASGGANSKNASKSGGNGDKPLE-SPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVG 214
K + A ++ S KP P+ + GH V V+F P+ + S
Sbjct: 6 KKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSS 64
Query: 215 DDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS 274
D + +W A G K H I V W+ D NL+++ S D ++ ++D ++S
Sbjct: 65 ADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWD---VSS 118
Query: 275 DGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
G + +GHS V C ++P + + S ++ + IWD
Sbjct: 119 ---GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV-RIWD 157
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + DV + S + S DD L +WD SG +K K H+ + C ++NP
Sbjct: 85 GHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQS 141
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
NLI++GS D S+ ++D + G + HS V V ++ D S + SS+ DG
Sbjct: 142 -NLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYDG 193
Query: 312 ILNIWD 317
+ IWD
Sbjct: 194 LCRIWD 199
Score = 133 (51.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 40/163 (24%), Positives = 69/163 (42%)
Query: 156 KSTASGGANSKNASKSGGNGDKPLE-SPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVG 214
K + A ++ S KP P+ + GH V V+F P+ + S
Sbjct: 6 KKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSS 64
Query: 215 DDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS 274
D + +W A G K H I V W+ D NL+++ S D ++ ++D ++S
Sbjct: 65 ADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWD---VSS 118
Query: 275 DGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
G + +GHS V C ++P + + S ++ + IWD
Sbjct: 119 ---GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV-RIWD 157
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + DV + S + S DD L +WD SG +K K H+ + C ++NP
Sbjct: 85 GHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQS 141
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
NLI++GS D S+ ++D + G + HS V V ++ D S + SS+ DG
Sbjct: 142 -NLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYDG 193
Query: 312 ILNIWD 317
+ IWD
Sbjct: 194 LCRIWD 199
Score = 133 (51.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 40/163 (24%), Positives = 69/163 (42%)
Query: 156 KSTASGGANSKNASKSGGNGDKPLE-SPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVG 214
K + A ++ S KP P+ + GH V V+F P+ + S
Sbjct: 6 KKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSS 64
Query: 215 DDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS 274
D + +W A G K H I V W+ D NL+++ S D ++ ++D ++S
Sbjct: 65 ADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWD---VSS 118
Query: 275 DGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
G + +GHS V C ++P + + S ++ + IWD
Sbjct: 119 ---GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV-RIWD 157
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + DV + S + S DD L +WD SG +K K H+ + C ++NP
Sbjct: 85 GHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQS 141
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
NLI++GS D S+ ++D + G + HS V V ++ D S + SS+ DG
Sbjct: 142 -NLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYDG 193
Query: 312 ILNIWD 317
+ IWD
Sbjct: 194 LCRIWD 199
Score = 133 (51.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 40/163 (24%), Positives = 69/163 (42%)
Query: 156 KSTASGGANSKNASKSGGNGDKPLE-SPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVG 214
K + A ++ S KP P+ + GH V V+F P+ + S
Sbjct: 6 KKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSS 64
Query: 215 DDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTS 274
D + +W A G K H I V W+ D NL+++ S D ++ ++D ++S
Sbjct: 65 ADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWD---VSS 118
Query: 275 DGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
G + +GHS V C ++P + + S ++ + IWD
Sbjct: 119 ---GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV-RIWD 157
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 70/247 (28%), Positives = 107/247 (43%)
Query: 91 ELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAAD-SHPDLDQSVVLWSIQDHVSALA 149
++ +S ++A V +W V + R +V AAD S D + VL I D +A
Sbjct: 237 DVTDDSSLIAGGFADSTVRVWSVTPKKLR-SVKQAADLSLIDKESDDVLERIMDEKTASE 295
Query: 150 AEPGSAKSTASGGAN---SKN-ASKSGGNGDKPLES-PSIGARGKYLGHEDTVEDVQFCP 204
+ S GA+ +N S +G L S + Y GH V D QF P
Sbjct: 296 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 355
Query: 205 SSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSI 264
F S G D LW A P +++ H AD++C ++P+ N + TGSAD ++
Sbjct: 356 YGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHPNS-NYVATGSADRTV 411
Query: 265 HMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEK 324
++D G+ + F GH + + +SP+ + A DG + +WD IG
Sbjct: 412 RLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWD---IGHG 461
Query: 325 QDYGELK 331
GELK
Sbjct: 462 LMVGELK 468
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 34/135 (25%), Positives = 64/135 (47%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
+ GH V +F P+S + + G D + LWD +G+ V++ H IH + ++
Sbjct: 383 FAGHLADVNCTRFHPNS--NYVATGSADRTVRLWDVLNGN--CVRIFTGHKGPIHSLTFS 438
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P+ + TG+ D + ++D G G + + +GH+ V +++S D + S +
Sbjct: 439 PNG-RFLATGATDGRVLLWDI------GHGLMVGELKGHTDTVCSLRFSRD-GEILASGS 490
Query: 309 EDGILNIWDHEKIGE 323
D + +WD K E
Sbjct: 491 MDNTVRLWDAVKAFE 505
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 50/167 (29%), Positives = 76/167 (45%)
Query: 189 KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
KY GH + DVQF P F + D LWD + P ++V H D+ CV ++
Sbjct: 440 KYAGHNAPIWDVQFSPFGYY-FATASHDQTARLWDVEHAA-P-LRVFVGHQNDVDCVSFH 496
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P+ L TGS+D++ M+D R G + F H + V + S D S+ S+
Sbjct: 497 PNAAYLA-TGSSDHTTRMWDVR------TGGTVRVFNAHHSPVSALCMSADGLSL-ASAD 548
Query: 309 EDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIG 355
E GI+ +WD + + +K+ I YS + K+L S G
Sbjct: 549 ESGIIKVWDLRSSNQHVSF--VKHSSI--VYSLSF-SYDNKILVSGG 590
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 42/128 (32%), Positives = 63/128 (49%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
Y GH V DV+F P F + D LW A P +++ H D+ CV+++P
Sbjct: 555 YKGHTQPVWDVKFSPLG-HYFVTASHDQTARLW-ATDHIYP-LRIFAGHINDVDCVEFHP 611
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ N + TGS+D + M+D G+ + F GH+ +V C+ SPD S E
Sbjct: 612 NS-NYVFTGSSDKTCRMWDVH------TGNCVRVFLGHTNSVNCLAVSPD-GRWLASGGE 663
Query: 310 DGILNIWD 317
DGI+ +WD
Sbjct: 664 DGIICVWD 671
Score = 133 (51.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 45/175 (25%), Positives = 79/175 (45%)
Query: 110 IWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNAS 169
+WDV+ P H + A SH DQ+ LW+ DH+ L G + +
Sbjct: 562 VWDVKFSPLGHYFVTA--SH---DQTARLWAT-DHIYPLRIFAGHINDVDCVEFHPNSNY 615
Query: 170 KSGGNGDKPLESPSIGARG---KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS 226
G+ DK + +LGH ++V + P + S G+D + +WD S
Sbjct: 616 VFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDG-RWLASGGEDGIICVWDIGS 674
Query: 227 GSTPAVKVEKAH-NADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSP 280
G +K + H A ++ + ++ D ++++G ADNS+ ++D +K T+D P
Sbjct: 675 GRR--LKSMRGHARASLYSLAFS-RDGTVLVSGCADNSVRVWDVKKNTNDAGPEP 726
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 37/132 (28%), Positives = 63/132 (47%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
+ GH + V+ V+F P+S F D +C +WD +G+ V+V H ++C+ +P
Sbjct: 597 FAGHINDVDCVEFHPNSNYVFTGSSDKTCR-MWDVHTGN--CVRVFLGHTNSVNCLAVSP 653
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVL-CVQWSPDKSSVFGSSA 308
D + +G D I ++D G G + GH+ A L + +S D +V S
Sbjct: 654 -DGRWLASGGEDGIICVWDI------GSGRRLKSMRGHARASLYSLAFSRD-GTVLVSGC 705
Query: 309 EDGILNIWDHEK 320
D + +WD +K
Sbjct: 706 ADNSVRVWDVKK 717
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 156 (60.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 46/187 (24%), Positives = 85/187 (45%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+D V D+ F PS + S D L +WD ++V H ++C +P D
Sbjct: 151 GHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP-D 208
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+++ + + + S+ ++ R T I K EGH ++V+ +SPD + + +S +
Sbjct: 209 CSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDTS 262
Query: 312 ILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTMVK 371
++ +WD GE+ L + + P + D D+ L S+ G L + +
Sbjct: 263 VI-MWD-PYTGER--LRSLHHTQLEP--TMDDSDVHMSSLRSVCFSP-EGLYLATVADDR 315
Query: 372 VLEIWRM 378
+L IW +
Sbjct: 316 LLRIWAL 322
>ASPGD|ASPL0000042232 [details] [associations]
symbol:AN1695 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001307 EMBL:AACD01000026
eggNOG:NOG314410 KO:K11805 OrthoDB:EOG48PQTZ RefSeq:XP_659299.1
ProteinModelPortal:Q5BCN5 EnsemblFungi:CADANIAT00008338
GeneID:2875575 KEGG:ani:AN1695.2 HOGENOM:HOG000189437 OMA:RFCANSV
Uniprot:Q5BCN5
Length = 609
Score = 161 (61.7 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 48/157 (30%), Positives = 77/157 (49%)
Query: 182 PSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS--GST----PAVKVE 235
P++ A+ + + H+ V DV+FC +S F S G D + ++D RS ST P K E
Sbjct: 386 PTLTAKTQLIAHDKEVYDVRFCANSVDVFVSCGADGSVRMFDLRSLEHSTIIYEPTEKNE 445
Query: 236 KAHNA-----DIHCVDW---------NPHDVNLILTGSAD-NSIHMFDRRKLTSDGVGSP 280
K + W +PHD +L+ T S D N + + D R+ G
Sbjct: 446 KLMSPGNGSPSAPTTTWPPPLLRISASPHDAHLLATFSQDSNIVRVLDVRQ-----PGQA 500
Query: 281 IHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
+ + +GHSA + V+WSP++ V S A+D ++ +WD
Sbjct: 501 LLELKGHSAPLNTVEWSPNRRGVLASGADDCLVLLWD 537
Score = 40 (19.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 102 HTDSPDVLIWDVEAQPNRHAVLGAADSHPDLD 133
H SP+ Q +++ LG AD P D
Sbjct: 148 HGSSPNAAFQPPTPQGAKYSPLGLADIRPSGD 179
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 155 (59.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 46/187 (24%), Positives = 85/187 (45%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+D V D+ F PS + S D L +WD ++V H ++C +P D
Sbjct: 153 GHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP-D 210
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+++ + + + S+ ++ R T I K EGH ++V+ +SPD + + +S +
Sbjct: 211 CSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDTN 264
Query: 312 ILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTMVK 371
++ +WD GE+ L + ++P D D+ L S+ G L + +
Sbjct: 265 VI-MWD-PYTGER--LRSLHHTQLNPPM--DDSDVHISSLRSVCFSP-EGLYLATVADDR 317
Query: 372 VLEIWRM 378
+L IW +
Sbjct: 318 LLRIWAL 324
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 159 (61.0 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 71/243 (29%), Positives = 101/243 (41%)
Query: 95 NSKIVATHTDSPDVLIWDVEAQPNRHAVLGAAD-SHPDLDQSVVLWSIQDHVSA-----L 148
+S IV DS V +W V + R +V AAD S D + VL I D +A L
Sbjct: 462 SSMIVGGFADST-VRVWSVTPKKLR-SVKAAADLSLIDKESDDVLERIMDEKTASELKIL 519
Query: 149 AAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQ 208
G T+ + S S + + Y GH V D QF P
Sbjct: 520 YGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY 579
Query: 209 EFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFD 268
F S G D LW A P +++ H AD+ C ++P+ N I TGSAD ++ ++D
Sbjct: 580 -FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVTCTRFHPNS-NYIATGSADRTVRLWD 635
Query: 269 RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYG 328
G+ + F GH + + +SP+ + A DG + +WD IG G
Sbjct: 636 VLN------GNCVRIFTGHKGPIHSLAFSPN-GRFLATGATDGRVLLWD---IGHGLMVG 685
Query: 329 ELK 331
ELK
Sbjct: 686 ELK 688
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 43/182 (23%), Positives = 80/182 (43%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
+ GH V +F P+S + + G D + LWD +G+ V++ H IH + ++
Sbjct: 603 FAGHLADVTCTRFHPNS--NYIATGSADRTVRLWDVLNGN--CVRIFTGHKGPIHSLAFS 658
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P+ + TG+ D + ++D G G + + +GH+ + +++S D + S +
Sbjct: 659 PNG-RFLATGATDGRVLLWDI------GHGLMVGELKGHTDTIYALRFSRD-GEILASGS 710
Query: 309 EDGILNIWDHEKIGEKQDYGELKYPIIH---PAYSSDML--DIETKLLTSIGMHLIHGRL 363
D + +WD K E + + H P S D+L TK + +H L
Sbjct: 711 MDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNL 770
Query: 364 LV 365
L+
Sbjct: 771 LL 772
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 159 (61.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 70/247 (28%), Positives = 107/247 (43%)
Query: 91 ELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAAD-SHPDLDQSVVLWSIQDHVSALA 149
++ +S ++A V +W V + R +V AAD S D + VL I D +A
Sbjct: 477 DVTDDSSLIAGGFADSTVRVWSVTPKKLR-SVKQAADLSLIDKESDDVLERIMDEKTASE 535
Query: 150 AEPGSAKSTASGGAN---SKN-ASKSGGNGDKPLES-PSIGARGKYLGHEDTVEDVQFCP 204
+ S GA+ +N S +G L S + Y GH V D QF P
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 595
Query: 205 SSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSI 264
F S G D LW A P +++ H AD++C ++P+ N + TGSAD ++
Sbjct: 596 YGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHPNS-NYVATGSADRTV 651
Query: 265 HMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEK 324
++D G+ + F GH + + +SP+ + A DG + +WD IG
Sbjct: 652 RLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWD---IGHG 701
Query: 325 QDYGELK 331
GELK
Sbjct: 702 LMVGELK 708
Score = 123 (48.4 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 42/182 (23%), Positives = 80/182 (43%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
+ GH V +F P+S + + G D + LWD +G+ V++ H IH + ++
Sbjct: 623 FAGHLADVNCTRFHPNS--NYVATGSADRTVRLWDVLNGN--CVRIFTGHKGPIHSLTFS 678
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P+ + TG+ D + ++D G G + + +GH+ V +++S D + S +
Sbjct: 679 PNG-RFLATGATDGRVLLWDI------GHGLMVGELKGHTDTVCSLRFSRD-GEILASGS 730
Query: 309 EDGILNIWDHEKIGEKQDYGELKYPIIH---PAYSSDML--DIETKLLTSIGMHLIHGRL 363
D + +WD K E + + H P S ++L TK + +H L
Sbjct: 731 MDNTVRLWDAVKAFEDVETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNL 790
Query: 364 LV 365
++
Sbjct: 791 VL 792
Score = 54 (24.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 149 AAEPGSAKSTAS---GGANSKNASKSGGNGDKPLESPSIGA 186
A E G + + GG N AS +GG+G P S ++ A
Sbjct: 32 AGEGGGGTTNSGPNGGGGNVAAASSAGGDGGTPKPSVAVSA 72
Score = 46 (21.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 152 PGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARG 188
P + GG + N+ +GG G+ S S G G
Sbjct: 26 PQAGDGAGEGGGGTTNSGPNGGGGNVAAAS-SAGGDG 61
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 159 (61.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 70/247 (28%), Positives = 107/247 (43%)
Query: 91 ELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAAD-SHPDLDQSVVLWSIQDHVSALA 149
++ +S ++A V +W V + R +V AAD S D + VL I D +A
Sbjct: 478 DVTDDSSLIAGGFADSTVRVWSVTPKKLR-SVKQAADLSLIDKESDDVLERIMDEKTASE 536
Query: 150 AEPGSAKSTASGGAN---SKN-ASKSGGNGDKPLES-PSIGARGKYLGHEDTVEDVQFCP 204
+ S GA+ +N S +G L S + Y GH V D QF P
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 596
Query: 205 SSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSI 264
F S G D LW A P +++ H AD++C ++P+ N + TGSAD ++
Sbjct: 597 YGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHPNS-NYVATGSADRTV 652
Query: 265 HMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEK 324
++D G+ + F GH + + +SP+ + A DG + +WD IG
Sbjct: 653 RLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWD---IGHG 702
Query: 325 QDYGELK 331
GELK
Sbjct: 703 LMVGELK 709
Score = 123 (48.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 42/182 (23%), Positives = 80/182 (43%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
+ GH V +F P+S + + G D + LWD +G+ V++ H IH + ++
Sbjct: 624 FAGHLADVNCTRFHPNS--NYVATGSADRTVRLWDVLNGN--CVRIFTGHKGPIHSLTFS 679
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P+ + TG+ D + ++D G G + + +GH+ V +++S D + S +
Sbjct: 680 PNG-RFLATGATDGRVLLWDI------GHGLMVGELKGHTDTVCSLRFSRD-GEILASGS 731
Query: 309 EDGILNIWDHEKIGEKQDYGELKYPIIH---PAYSSDML--DIETKLLTSIGMHLIHGRL 363
D + +WD K E + + H P S ++L TK + +H L
Sbjct: 732 MDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNL 791
Query: 364 LV 365
++
Sbjct: 792 VL 793
Score = 53 (23.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 152 PGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARG 188
P + T GG + N +GG G+ + S G G
Sbjct: 26 PQAGDGTGEGGGGTTNNGPNGGGGNVAAAASSAGGDG 62
Score = 47 (21.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 161 GGAN-SKNASKSGGNGDKPLESPSIGA 186
GG N + AS +GG+G P S ++ A
Sbjct: 47 GGGNVAAAASSAGGDGGTPKPSVAVSA 73
>ASPGD|ASPL0000074357 [details] [associations]
symbol:AN4518 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4RBTST RefSeq:XP_662122.1 ProteinModelPortal:Q5B4L2
EnsemblFungi:CADANIAT00005923 GeneID:2872316 KEGG:ani:AN4518.2
HOGENOM:HOG000184038 OMA:DVKWSHG Uniprot:Q5B4L2
Length = 1289
Score = 161 (61.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 185 GARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHC 244
G+R +Y + D V DV++ P F D + LWD R S+P +++ AH+ +
Sbjct: 236 GSRDQYNSNSDAVRDVRWSPGDGVLFAVATDSGAIQLWDIRKSSSPILRIT-AHDRPCYS 294
Query: 245 VDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVF 304
VDW+P D I++G D + +++ +T++ P+ +F A VL V+W P S
Sbjct: 295 VDWHP-DGKHIVSGGTDRQVKVWEF-SITAERRQKPLFQFRTPQA-VLNVRWRPPSWSRE 351
Query: 305 GSSAED 310
S+ D
Sbjct: 352 SDSSGD 357
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 37/135 (27%), Positives = 68/135 (50%)
Query: 193 HED--TVEDVQFCPSSAQEFCSVG-DDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
H+D TV+DV++ + + + ++++D + + H+ +H + +NP
Sbjct: 145 HKDQLTVKDVKWSHGLYDQIIATAVANGRIVVYDLHRTGLEYCRFQ-GHSRQVHRLAFNP 203
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSD-GV---GSPIHKFEGHSAAVLCVQWSPDKSSVFG 305
H +L+GS D I M+D R + +D GV GS ++ +S AV V+WSP +F
Sbjct: 204 HQPAWLLSGSQDAHIRMWDLRTVPTDRGVSVCGSR-DQYNSNSDAVRDVRWSPGDGVLFA 262
Query: 306 SSAEDGILNIWDHEK 320
+ + G + +WD K
Sbjct: 263 VATDSGAIQLWDIRK 277
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 151 (58.2 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 62/206 (30%), Positives = 92/206 (44%)
Query: 117 PNRHAVLGAADSHPDLDQSVVLWSIQDH--VSALAAEPGSAKSTASGGANSKNASKSGGN 174
P+ +L A+D D V +W + + LA G KS AS S
Sbjct: 36 PDGRTLLTASD-----DGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSS-- 88
Query: 175 GDKPLESPSIGARGKYL----GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTP 230
D + + AR K L GH+ +VE V F P S Q S G D I+W+ +SG
Sbjct: 89 -DHSIRLWDV-ARSKCLHVLKGHQRSVETVSFSPDSKQ-LASGGWDKRAIVWEVQSGRRV 145
Query: 231 AVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAA 290
+ V H I D++P +L TGS D+++H++D R T V S H EGH+
Sbjct: 146 HLLV--GHCDSIQSSDFSPTSDSLA-TGSWDSTVHIWDLRASTP--VVS-YHNLEGHTGN 199
Query: 291 VLCVQWSPDKSSVFGSSAEDGILNIW 316
+ C+ +S S + S + D + +W
Sbjct: 200 ISCLCYSA--SGLLASGSWDKTICVW 223
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 158 (60.7 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 58/200 (29%), Positives = 86/200 (43%)
Query: 148 LAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIG---ARGKYLGHEDTVEDVQFCP 204
L G+ ST+ N S G+ DK + S+ A Y GH V DV F P
Sbjct: 521 LVGHSGTVYSTSFSPDNKYLLS---GSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSP 577
Query: 205 SSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSI 264
F + D LW P +++ H D+ CV ++P+ + TGS+D +
Sbjct: 578 LG-HYFATASHDQTARLWSC-DHIYP-LRIFAGHLNDVDCVSFHPNGC-YVFTGSSDKTC 633
Query: 265 HMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGE- 323
M+D G + F GH+A V+ + PD + +EDGI+N+WD G+
Sbjct: 634 RMWDV------STGDSVRLFLGHTAPVISIAVCPD-GRWLSTGSEDGIINVWDIGT-GKR 685
Query: 324 -KQDYGELKYPIIHPAYSSD 342
KQ G K I +YS +
Sbjct: 686 LKQMRGHGKNAIYSLSYSKE 705
Score = 141 (54.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 47/183 (25%), Positives = 80/183 (43%)
Query: 110 IWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNAS 169
+WDV P H A SH DQ+ LWS DH+ L G +
Sbjct: 570 VWDVSFSPLGHYF--ATASH---DQTARLWSC-DHIYPLRIFAGHLNDVDCVSFHPNGCY 623
Query: 170 KSGGNGDKPLE--SPSIGARGK-YLGHEDTVEDVQFCPSSAQEFCSVG-DDSCLILWDAR 225
G+ DK S G + +LGH V + CP + S G +D + +WD
Sbjct: 624 VFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDG--RWLSTGSEDGIINVWDIG 681
Query: 226 SGSTPAVKVEKAHNAD-IHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKF 284
+G +K + H + I+ + ++ N++++G AD+++ ++D +K T++ P F
Sbjct: 682 TGKR--LKQMRGHGKNAIYSLSYSKEG-NVLISGGADHTVRVWDLKKATTEPSAEPDEPF 738
Query: 285 EGH 287
G+
Sbjct: 739 IGY 741
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 154 (59.3 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 189 KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDW 247
+Y HE V F + S G D C + +W R ++ + ++ A+I CV +
Sbjct: 458 EYEEHEKRAWSVDFSRTEPSMLVS-GSDDCKVKVWCTRQEAS-VINIDM--KANICCVKY 513
Query: 248 NPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
NP N I GSAD+ IH +D R ++ P+H F GH AV V++ + S+
Sbjct: 514 NPGSSNYIAVGSADHHIHYYDLRNISQ-----PLHVFSGHKKAVSYVKFLSNNE--LASA 566
Query: 308 AEDGILNIWD 317
+ D L +WD
Sbjct: 567 STDSTLRLWD 576
Score = 47 (21.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 149 AAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSI 184
A +P S+ GAN ++ + GG+G + +P +
Sbjct: 12 AVKPDPRTSSVGEGAN-RHENDDGGSGGSEIGAPDL 46
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 46/187 (24%), Positives = 84/187 (44%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+D V D+ F PS + S D L +WD ++V H ++C +P D
Sbjct: 151 GHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP-D 208
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+++ + + + S+ ++ R T I K EGH ++V+ +SPD + + +S +
Sbjct: 209 CSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDTN 262
Query: 312 ILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTMVK 371
++ +WD GE+ L + + P D D+ L S+ G L + +
Sbjct: 263 VI-MWD-PYTGER--LRSLHHTQLSPPM--DDSDVHISSLRSVCFSP-EGLYLATVADDR 315
Query: 372 VLEIWRM 378
+L IW +
Sbjct: 316 LLRIWAL 322
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 143 (55.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 50/184 (27%), Positives = 89/184 (48%)
Query: 139 WSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL---GHED 195
W +Q+ + A + S G A+ + + +GG+ D + SI + GH
Sbjct: 11 WKLQE----IVAHASNVSSLVLGKASGRLLA-TGGD-DCRVNLWSINKPNCIMSLTGHTS 64
Query: 196 TVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNL 254
VE V+ ++ +E G S I +WD + ++ H A+I +D++P+
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPYG-EF 119
Query: 255 ILTGSADNSIHMFD-RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
+ +GS D +I ++D RRK G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRRK----GC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTV 171
Query: 314 NIWD 317
+WD
Sbjct: 172 KLWD 175
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 151 (58.2 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 39/126 (30%), Positives = 63/126 (50%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + DV + S++ S DD L +WD RSG +K K H+ + C D+NP
Sbjct: 79 GHSLEISDVAWSSDSSR-LVSASDDKTLKVWDMRSGK--CLKTLKGHSDFVFCCDFNPPS 135
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
NLI++GS D S+ +++ + G + HS + V ++ + S + S + DG
Sbjct: 136 -NLIVSGSFDESVKIWEVK------TGKCLKTLSAHSDPISAVNFNCNGSLIV-SGSYDG 187
Query: 312 ILNIWD 317
+ IWD
Sbjct: 188 LCRIWD 193
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/142 (23%), Positives = 67/142 (47%)
Query: 176 DKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVE 235
++P + P+ R GH + V+F P+ + S D+ +I+W A G+ K
Sbjct: 22 EEP-QKPNYALRLTLAGHSAAISSVKFSPNG-EWLASSAADALIIIWGAYDGNCK--KTL 77
Query: 236 KAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQ 295
H+ +I V W+ D + +++ S D ++ ++D R G + +GHS V C
Sbjct: 78 YGHSLEISDVAWSS-DSSRLVSASDDKTLKVWDMRS------GKCLKTLKGHSDFVFCCD 130
Query: 296 WSPDKSSVFGSSAEDGILNIWD 317
++P + + S ++ + IW+
Sbjct: 131 FNPPSNLIVSGSFDESV-KIWE 151
>POMBASE|SPAC890.04c [details] [associations]
symbol:SPAC890.04c "ribosome biogenesis protein Ytm1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=ISS]
[GO:0016043 "cellular component organization" evidence=NAS]
[GO:0042254 "ribosome biogenesis" evidence=ISO] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC890.04c GO:GO:0043234
GO:GO:0005654 EMBL:CU329670 GO:GO:0005730 GO:GO:0015630
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0006364
GO:GO:0016043 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 HAMAP:MF_03029 OMA:DCTINLW OrthoDB:EOG4GQTDF
EMBL:AF237708 PIR:T50260 RefSeq:NP_594822.1
ProteinModelPortal:Q9URY0 STRING:Q9URY0 EnsemblFungi:SPAC890.04c.1
GeneID:2543549 KEGG:spo:SPAC890.04c NextBio:20804558 Uniprot:Q9URY0
Length = 440
Score = 138 (53.6 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 42/140 (30%), Positives = 64/140 (45%)
Query: 181 SPSIGARGKYL---GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKA 237
+P GAR + GH V D+ F + + SVG D + WD +G K+ KA
Sbjct: 253 TPQAGARSPLILCEGHTGPVMDIVFSDDPSVAY-SVGQDHTIKTWDLITGQNVDSKITKA 311
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
+ CV+ D++L++ GS+ I + D R SD + S H GH V + S
Sbjct: 312 ---PLLCVE-KLTDLHLVICGSSARHIVVHDPRA-GSDKIVS--HTLSGHKNLVSGLSAS 364
Query: 298 PDKSSVFGSSAEDGILNIWD 317
P+ +F S + D +WD
Sbjct: 365 PENPYMFASVSHDNTCRVWD 384
Score = 58 (25.5 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 68 EARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQP 117
E +S + + + H V R+R L +S ++ D+ V IWD E P
Sbjct: 182 EKKSSGILQTLFVGHKDIVERVRSLESSSVFISASADNT-VGIWDFERSP 230
Score = 43 (20.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 132 LDQSVVLWSIQDHVSALAAEPGSA 155
LDQ + W I++ S L AE S+
Sbjct: 163 LDQKIFHWVIEEPESMLDAEKKSS 186
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 157 (60.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 69/247 (27%), Positives = 107/247 (43%)
Query: 91 ELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAAD-SHPDLDQSVVLWSIQDHVSALA 149
++ +S ++A V +W V + R +V A+D S D + VL I D +A
Sbjct: 478 DVTDDSSLIAGGFADSTVRVWSVTPKKLR-SVKQASDLSLIDKESDDVLERIMDEKTASE 536
Query: 150 AEPGSAKSTASGGAN---SKN-ASKSGGNGDKPLES-PSIGARGKYLGHEDTVEDVQFCP 204
+ S GA+ +N S +G L S + Y GH V D QF P
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 596
Query: 205 SSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSI 264
F S G D LW A P +++ H AD++C ++P+ N + TGSAD ++
Sbjct: 597 YGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRYHPNS-NYVATGSADRTV 652
Query: 265 HMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEK 324
++D G+ + F GH + + +SP+ + A DG + +WD IG
Sbjct: 653 RLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWD---IGHG 702
Query: 325 QDYGELK 331
GELK
Sbjct: 703 LMVGELK 709
Score = 120 (47.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 41/182 (22%), Positives = 80/182 (43%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
+ GH V ++ P+S + + G D + LWD +G+ V++ H IH + ++
Sbjct: 624 FAGHLADVNCTRYHPNS--NYVATGSADRTVRLWDVLNGN--CVRIFTGHKGPIHSLTFS 679
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P+ + TG+ D + ++D G G + + +GH+ V +++S D + S +
Sbjct: 680 PNG-RFLATGATDGRVLLWDI------GHGLMVGELKGHTDTVCSLRFSRD-GEILASGS 731
Query: 309 EDGILNIWDHEKIGEKQDYGELKYPIIH---PAYSSDML--DIETKLLTSIGMHLIHGRL 363
D + +WD K E + + H P S ++L TK + +H L
Sbjct: 732 MDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNL 791
Query: 364 LV 365
++
Sbjct: 792 VL 793
Score = 44 (20.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 161 GGANSKNASKSGGNGDKPLESPSIGA 186
GG N A+ +GG+G P ++ A
Sbjct: 48 GGGNVAVAAAAGGDGGTPKPGVAVSA 73
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 150 (57.9 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H + + P +A F SV D L +WD+R + + KAH+ +I DWN ++
Sbjct: 146 HRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRS--LNTIKAHDHEILTCDWNKYND 203
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGI 312
++TGS D +I ++D R D P GH+ AV ++ SP S+ S + D
Sbjct: 204 KEVVTGSVDKTIRIWDIRY--PD---RPTTILRGHTYAVRRIKCSPHSESMLASCSYDMS 258
Query: 313 LNIWDHEK 320
+ +WD +
Sbjct: 259 VIVWDRAR 266
Score = 142 (55.0 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 195 DTVEDVQFCPSSAQEFCSVGD---DSCLILWD--ARSGSTPAVKVEKAHNADIHCVDWNP 249
DT + + C S + C V D + +WD A SG P +K + H +++ VDWN
Sbjct: 56 DTRDGLYDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRP-IKSFEEHTKEVYSVDWNL 114
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ +TGS D SI +++ R S + F H + WSP + +F S +
Sbjct: 115 VTKDTFITGSWDQSIKIWNPRMDRS------LKTFREHRYCIYSAIWSPRNAHLFASVSG 168
Query: 310 DGILNIWD 317
D L IWD
Sbjct: 169 DRTLKIWD 176
Score = 38 (18.4 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 94 QNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSI 141
+N VA+ + + IWD +A P+ + + + H SV W++
Sbjct: 69 ENECHVASSSGDGSIKIWDTQA-PSGGRPIKSFEEHTKEVYSVD-WNL 114
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 156 (60.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 69/247 (27%), Positives = 107/247 (43%)
Query: 91 ELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAAD-SHPDLDQSVVLWSIQDHVSALA 149
++ +S ++A V +W V + R +V A+D S D + VL I D +A
Sbjct: 475 DVTDDSSLIAGGFADSTVRVWSVTPKKLR-SVKQASDLSLIDKESDDVLERIMDEKTASE 533
Query: 150 AEPGSAKSTASGGAN---SKN-ASKSGGNGDKPLES-PSIGARGKYLGHEDTVEDVQFCP 204
+ S GA+ +N S +G L S + Y GH V D QF P
Sbjct: 534 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 593
Query: 205 SSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSI 264
F S G D LW A P +++ H AD++C ++P+ N + TGSAD ++
Sbjct: 594 YGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHPNS-NYVATGSADRTV 649
Query: 265 HMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEK 324
++D G+ + F GH + + +SP+ + A DG + +WD IG
Sbjct: 650 RLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWD---IGHG 699
Query: 325 QDYGELK 331
GELK
Sbjct: 700 LMVGELK 706
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 156 (60.0 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 69/247 (27%), Positives = 107/247 (43%)
Query: 91 ELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAAD-SHPDLDQSVVLWSIQDHVSALA 149
++ +S ++A V +W V + R +V A+D S D + VL I D +A
Sbjct: 477 DVTDDSSLIAGGFADSTVRVWSVTPKKLR-SVKQASDLSLIDKESDDVLERIMDEKTASE 535
Query: 150 AEPGSAKSTASGGAN---SKN-ASKSGGNGDKPLES-PSIGARGKYLGHEDTVEDVQFCP 204
+ S GA+ +N S +G L S + Y GH V D QF P
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 595
Query: 205 SSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSI 264
F S G D LW A P +++ H AD++C ++P+ N + TGSAD ++
Sbjct: 596 YGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHPNS-NYVATGSADRTV 651
Query: 265 HMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEK 324
++D G+ + F GH + + +SP+ + A DG + +WD IG
Sbjct: 652 RLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWD---IGHG 701
Query: 325 QDYGELK 331
GELK
Sbjct: 702 LMVGELK 708
Score = 122 (48.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 42/182 (23%), Positives = 80/182 (43%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
+ GH V +F P+S + + G D + LWD +G+ V++ H IH + ++
Sbjct: 623 FAGHLADVNCTRFHPNS--NYVATGSADRTVRLWDVLNGN--CVRIFTGHKGPIHSLTFS 678
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P+ + TG+ D + ++D G G + + +GH+ V +++S D + S +
Sbjct: 679 PNG-RFLATGATDGRVLLWDI------GHGLMVGELKGHTDTVCSLRFSRD-GEILASGS 730
Query: 309 EDGILNIWDHEKIGEKQDYGELKYPIIH---PAYSSDML--DIETKLLTSIGMHLIHGRL 363
D + +WD K E + + H P S ++L TK + +H L
Sbjct: 731 MDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNL 790
Query: 364 LV 365
++
Sbjct: 791 VL 792
Score = 47 (21.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 161 GGANSKNASKSGGNGDKPLESPSIGA 186
GG N +S +GG+G P + ++ A
Sbjct: 47 GGGNVAASSSTGGDGGTPKPTVAVSA 72
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 149 (57.5 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 40/135 (29%), Positives = 64/135 (47%)
Query: 191 LGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVK------VEKAHNADIHC 244
+GHE TV + F SS + F S GDD L +W VK + HN I+
Sbjct: 176 IGHESTVWSLSF-HSSGELFVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGYHNRPIYD 234
Query: 245 VDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSP---IHKFEGHSAAVLCVQWSPDKS 301
VDW+ + N I T D++I +F ++T + + I ++ H+ V V+W P
Sbjct: 235 VDWSKLN-NKIATACGDDAIRIFSIVRITIS-ISNQLLFIAYYQAHNHDVNVVRWHPKVD 292
Query: 302 SVFGSSAEDGILNIW 316
++ S ++D + IW
Sbjct: 293 NILASGSDDNCIKIW 307
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 47/185 (25%), Positives = 78/185 (42%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWD--ARSGSTPAVKVEKAHNADIHCVDWNP 249
GHE+ V+ V + SS S D +W+ V H+ D+ V W+P
Sbjct: 87 GHENEVKCVNWS-SSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSP 145
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ N +++ S DN+I ++ +++ D S H GH + V + + +F S +
Sbjct: 146 KE-NALVSASYDNTIKIY--KEVDDDWECS--HTLIGHESTVWSLSFH-SSGELFVSCGD 199
Query: 310 DGILNIWDHEKIGEKQDYGELKYPII---H--PAYSSDMLDIETKLLTSIGMHLIHGRLL 364
D +L IW K G D + I H P Y D + K+ T+ G I +
Sbjct: 200 DKVLKIWKCLKSGPS-DVKWISICTIAGYHNRPIYDVDWSKLNNKIATACGDDAIRIFSI 258
Query: 365 VCLTM 369
V +T+
Sbjct: 259 VRITI 263
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 155 (59.6 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 46/187 (24%), Positives = 86/187 (45%)
Query: 191 LGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPH 250
+ H D V D+ F P + S D L +WD + VKV + H ++C ++P
Sbjct: 168 MDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLKDDGN-MVKVLRGHQNWVYCSAFSP- 225
Query: 251 DVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAED 310
D +++ + A ++ ++D K T I K EGH V+C ++SPD ++ +++ D
Sbjct: 226 DSSVLCSVGAGKAVFLWDMDKYTL------IRKLEGHHNDVVCCEFSPD-GALLATASYD 278
Query: 311 GILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIH-GRLLVCLTM 369
+ +WD + G L +P P ++ D + + S+ H GR + +T
Sbjct: 279 TRVIVWDPHTATVLLELGHL-FPPPSPIFAGGAND---RWVRSVAF--CHDGRHIASVTD 332
Query: 370 VKVLEIW 376
+++ W
Sbjct: 333 DRLVRFW 339
Score = 37 (18.1 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 94 QNSKIVATHTDSPDVLIWDV 113
Q+ ++AT ++ + IWDV
Sbjct: 139 QDQLLLATGLNNGRIKIWDV 158
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 141 (54.7 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 39/128 (30%), Positives = 67/128 (52%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPH 250
GH VE V+ ++ +E G S I +WD + ++ H A+I +D++P+
Sbjct: 65 GHTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPY 120
Query: 251 DVNLILTGSADNSIHMFD-RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ +GS D +I ++D RRK G + ++ GHS AV C+++SPD S+A+
Sbjct: 121 G-EFVASGSQDTNIKLWDIRRK----GC---VFRYRGHSQAVRCLRFSPD-GKWLASAAD 171
Query: 310 DGILNIWD 317
D + +WD
Sbjct: 172 DHTVKLWD 179
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 151 (58.2 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 46/187 (24%), Positives = 84/187 (44%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+D V D+ F PS + S D L +WD ++V H ++C +P D
Sbjct: 153 GHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP-D 210
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+++ + + + S+ ++ R T I K EGH ++V+ +SPD + + +S +
Sbjct: 211 CSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDTN 264
Query: 312 ILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTMVK 371
++ +WD GE+ L + + P D D+ L S+ G L + +
Sbjct: 265 VI-MWD-PYTGERLRL--LHHTQLDPPM--DDSDVHISSLRSVCFSP-EGLYLATVADDR 317
Query: 372 VLEIWRM 378
+L IW +
Sbjct: 318 LLRIWAL 324
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 151 (58.2 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 63/248 (25%), Positives = 101/248 (40%)
Query: 77 FKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSV 136
F H ++ E+ +S+++A D+ V +W + A+ + A S L V
Sbjct: 273 FYAFQHTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRARKLKAGPHKADVSKIRLACDV 332
Query: 137 VLWSIQDH------VSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKY 190
+ D + L G TA S S S + + + S Y
Sbjct: 333 LEEEADDEDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLY 392
Query: 191 LGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWD-ARSGSTPAVKVEKAHNADIHCVDWNP 249
GH V DV P S F + D LW AR T +++ H +D+ CV ++P
Sbjct: 393 RGHAYPVWDVDVSPCSLY-FSTASHDRTARLWSFAR---TYPLRLYAGHLSDVDCVKFHP 448
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ N I TGS D ++ ++ R+ G+ + F GH VL + +SP+ S+ E
Sbjct: 449 NS-NYIATGSTDKTVRLWSTRQ------GASVRLFTGHRGPVLTLAFSPN-GKYLASAGE 500
Query: 310 DGILNIWD 317
D L +WD
Sbjct: 501 DQRLKLWD 508
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 53/196 (27%), Positives = 89/196 (45%)
Query: 110 IWDVEAQPNRHAVLGAADSHPDLDQSVVLWSI-QDHVSALAAEPGSAKSTASGGANSKNA 168
+WDV+ P ++ + SH D++ LWS + + L A S NS
Sbjct: 399 VWDVDVSPC--SLYFSTASH---DRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYI 453
Query: 169 SKSGGNGDKPLE--SPSIGARGK-YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDAR 225
+ G+ DK + S GA + + GH V + F P+ + S G+D L LWD
Sbjct: 454 AT--GSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNG-KYLASAGEDQRLKLWDLA 510
Query: 226 SGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKL----TSDGVGSP- 280
SG K + H I + ++ D +L+ + S DN++ ++D R +DG S
Sbjct: 511 SGGL--FKDLRGHTDTISSLSFS-QDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSEL 567
Query: 281 IHKFEGHSAAVLCVQW 296
I ++ G ++ +L VQ+
Sbjct: 568 IGQYTGSTSNILNVQF 583
Score = 46 (21.3 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 47 QLEQATYKNR-QRLYLSEQFNEEARSPFVKKFKTIIHP 83
Q + Y+N+ RL F +EA P VK+ +++ P
Sbjct: 63 QADPQQYENQFSRL---RSFLQEAEGPLVKEASSVLFP 97
>TAIR|locus:2139489 [details] [associations]
symbol:AGB1 "AT4G34460" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0072593 "reactive oxygen species metabolic process"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=RCA;IMP] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA;IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0009845
"seed germination" evidence=IEP;IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0009723 "response to ethylene stimulus"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0048527 "lateral root development"
evidence=RCA;IMP] [GO:0009991 "response to extracellular stimulus"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA] [GO:0051707
"response to other organism" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005783
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009738 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0048527 GO:GO:0009817
GO:GO:0009845 GO:GO:0009887 GO:GO:0009788 GO:GO:0004871
GO:GO:0009991 GO:GO:0072593 GO:GO:0010154 EMBL:AL161585
GO:GO:0030968 EMBL:AL023094 GO:GO:0009867 PRINTS:PR00319
GO:GO:0080008 GO:GO:0005834 HOGENOM:HOG000176356 KO:K04536
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:GACDATS EMBL:U12232
IPI:IPI00545688 PIR:T05266 RefSeq:NP_195172.1 UniGene:At.22855
ProteinModelPortal:P49177 SMR:P49177 DIP:DIP-40108N IntAct:P49177
STRING:P49177 PaxDb:P49177 PRIDE:P49177 EnsemblPlants:AT4G34460.1
GeneID:829597 KEGG:ath:AT4G34460 GeneFarm:2858 TAIR:At4g34460
InParanoid:P49177 PhylomeDB:P49177 ProtClustDB:CLSN2685906
Genevestigator:P49177 Uniprot:P49177
Length = 377
Score = 150 (57.9 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 145 VSALAAEPGSAKSTASGGANSKNASKS-GGNGDKPLESPSIGARGKYLGHEDTVEDVQFC 203
V A P + +S A GG +S + S DK ++ GH V Q+
Sbjct: 110 VMTCAFSP-NGQSVACGGLDSVCSIFSLSSTADK---DGTVPVSRMLTGHRGYVSCCQYV 165
Query: 204 PSS-AQEFCSVGDDSCLILWDARSGSTPAV---KVEKAHNADIHCVDWNPHDVNLILTGS 259
P+ A S GD +C ILWD +G +V + + H AD+ V + + N ++GS
Sbjct: 166 PNEDAHLITSSGDQTC-ILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGS 224
Query: 260 ADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
D++ ++D R + F GH V V++ PD FG+ ++DG ++D
Sbjct: 225 CDSTARLWDTR-----AASRAVRTFHGHEGDVNTVKFFPDGYR-FGTGSDDGTCRLYD 276
Score = 111 (44.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 39/132 (29%), Positives = 56/132 (42%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH V V S+ F S DS LWD R+ S AV+ H D++ V + P D
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASR-AVRTFHGHEGDVNTVKFFP-D 259
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
TGS D + ++D R V P H +G + V + +S +F A +
Sbjct: 260 GYRFGTGSDDGTCRLYDIRTGHQLQVYQP-HG-DGENGPVTSIAFSVSGRLLFAGYASNN 317
Query: 312 ILNIWDHEKIGE 323
+WD +GE
Sbjct: 318 TCYVWD-TLLGE 328
Score = 55 (24.4 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 33/137 (24%), Positives = 55/137 (40%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAV-LGAADSHPDLDQSVVLWS 140
H G+V + P+ ++IV+ D +++W+ HA+ L A V+ +
Sbjct: 64 HTGKVYSLDWTPERNRIVSASQDGR-LIVWNALTSQKTHAIKLPCA--------WVMTCA 114
Query: 141 IQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTV--E 198
+ ++A G S S + S A K +G P+ G RG Y+ V E
Sbjct: 115 FSPNGQSVAC--GGLDSVCSIFSLSSTADK---DGTVPVSRMLTGHRG-YVSCCQYVPNE 168
Query: 199 DVQFCPSSAQEFCSVGD 215
D SS + C + D
Sbjct: 169 DAHLITSSGDQTCILWD 185
>UNIPROTKB|G4MXS3 [details] [associations]
symbol:MGG_08065 "WD domain-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001232 KO:K11805 RefSeq:XP_003715017.1
ProteinModelPortal:G4MXS3 EnsemblFungi:MGG_08065T0 GeneID:2678269
KEGG:mgr:MGG_08065 Uniprot:G4MXS3
Length = 454
Score = 106 (42.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 248 NPHDVNLILTGSAD-NSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
+PHD +L+ T + D N I + D R+ G + + GH ++ C++WSP + S
Sbjct: 325 SPHDTHLLATFAQDSNVIRILDVRQ-----PGQALLELRGHGGSLNCIEWSPLRRGTLAS 379
Query: 307 SAEDGILNIWD 317
A+D + IWD
Sbjct: 380 GADDCQVLIWD 390
Score = 89 (36.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 182 PSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS 226
PS+ A+ + + H+ V DV+FC +S F S G D + ++D RS
Sbjct: 237 PSLTAKTQLIAHDKEVYDVRFCANSVDVFVSCGQDGSVRMFDLRS 281
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 41/127 (32%), Positives = 64/127 (50%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + V F P S + S D + LWD R+G A + H A ++ + W+ D
Sbjct: 372 GHQALINQVLFSPDS-RIVASASFDKSIKLWDGRTGKYLASL--RGHVAAVYQIAWSA-D 427
Query: 252 VNLILTGSADNSIHMFD--RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
L+++GS+D+++ ++D +KLT+D GH+ V V WSPD V S +
Sbjct: 428 SRLLVSGSSDSTLKVWDVKAQKLTTD--------LPGHADEVYAVDWSPDGQRV-ASGGK 478
Query: 310 DGILNIW 316
D L IW
Sbjct: 479 DKCLRIW 485
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 34/110 (30%), Positives = 50/110 (45%)
Query: 208 QEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMF 267
+ S DD L LW P ++ H A I+ V ++P D ++ + S D SI ++
Sbjct: 344 ERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVLFSP-DSRIVASASFDKSIKLW 401
Query: 268 DRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 402 DGR------TGKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 444
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 60/224 (26%), Positives = 96/224 (42%)
Query: 145 VSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCP 204
V A P + +S A GG +S S N + +I GH+ V Q+ P
Sbjct: 111 VMTCAFAP-NGQSVACGGLDSA-CSIFNLNSQADRDG-NIPVSRILTGHKGYVSSCQYVP 167
Query: 205 SSAQEFC-SVGDDSCLILWDARSGSTPAV---KVEKAHNADIHCVDWNPHDVNLILTGSA 260
S GD +C +LWD +G ++ + H AD+ + N + N+ ++GS
Sbjct: 168 DQETRLITSSGDQTC-VLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSGSC 226
Query: 261 DNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEK 320
D ++ ++D R + S V + + GH + V++ PD FG+ ++DG ++D
Sbjct: 227 DATVRLWDIR-IASRAVRT----YHGHEGDINSVKFFPDGQR-FGTGSDDGTCRLFDVRT 280
Query: 321 IGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLL 364
+ Q Y P D D E +TSI I GRLL
Sbjct: 281 GHQLQVYSR------EP----DRNDNELPTVTSIAFS-ISGRLL 313
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 46/181 (25%), Positives = 89/181 (49%)
Query: 145 VSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCP 204
+SA+++ P S K +G K S N + + S ++ A GK T D + P
Sbjct: 21 LSAISSSPDSTKLIVAGRDIVKIVSVQ--NNEFKVTS-NLRA-GKTQSLNYTGNDCCWHP 76
Query: 205 SSAQEF----CSVGDDSCLILWDA-RSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGS 259
S + + + + +++W+ R GS +V H+ ++ + W+P ++ ILTGS
Sbjct: 77 SLLENYRFLIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGS 136
Query: 260 ADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHE 319
DN++ M+D R D + F S ++ VQ++P +++ F ++ ++G + +WD
Sbjct: 137 QDNTLRMWDIR----DSANASKITFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIR 192
Query: 320 K 320
K
Sbjct: 193 K 193
Score = 154 (59.3 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 40/130 (30%), Positives = 68/130 (52%)
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEK--AHNADIHCVDWNPHDV 252
+++ DVQF PS A +F + D+ + LWD R P + VEK +H + +DW+P +
Sbjct: 162 ESIRDVQFNPSQANQFAAAFDNGTIQLWDIRK---PTIAVEKITSHQGLVLTIDWHPEEK 218
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSP-DKSSVFG-SSAED 310
N+I +G D +I ++D G ++ S+ V ++W P +K + SS D
Sbjct: 219 NIIASGGRDRAIRVWDFSN------GKSLNNVSTISS-VSRIKWRPGNKWHIASCSSIVD 271
Query: 311 GILNIWDHEK 320
++IWD +K
Sbjct: 272 FQIHIWDVKK 281
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 31/129 (24%), Positives = 54/129 (41%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNAD-IHCVDWN 248
+ H V + + P + D+ L +WD R S A K+ + ++ I V +N
Sbjct: 112 FTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWDIRD-SANASKITFSPKSESIRDVQFN 170
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P N + +I ++D RK T + K H VL + W P++ ++ S
Sbjct: 171 PSQANQFAAAFDNGTIQLWDIRKPTI-----AVEKITSHQGLVLTIDWHPEEKNIIASGG 225
Query: 309 EDGILNIWD 317
D + +WD
Sbjct: 226 RDRAIRVWD 234
Score = 43 (20.2 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 18/83 (21%), Positives = 33/83 (39%)
Query: 42 CRWGPQLEQ------ATYKNRQRLYLSEQFNEEARSPFVKKFKTIIHPGEVNRIRELPQN 95
C W P L + AT + + E ++S V++ T H VN++ P+
Sbjct: 72 CCWHPSLLENYRFLIATAATNGAVVIWNTVREGSKS--VERVFTD-HSRAVNKLAWHPEK 128
Query: 96 SKIVATHTDSPDVLIWDVEAQPN 118
+ T + + +WD+ N
Sbjct: 129 LDCILTGSQDNTLRMWDIRDSAN 151
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 43/150 (28%), Positives = 72/150 (48%)
Query: 188 GKYLGHEDTVEDVQFCPSSAQEFC-SVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVD 246
G +GHE + DV++ PS +F S D LWDA + + +++ H+ + +
Sbjct: 259 GDLVGHERRISDVKYHPSG--KFIGSASHDMTWRLWDASTHQE--LLLQEGHDKGVFSLS 314
Query: 247 WNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
+ D +L+ +G D+ ++D R GS + GHS + V WSP+ V +
Sbjct: 315 FQC-DGSLVCSGGMDSLSMLWDIRS------GSKVMTLAGHSKPIYTVAWSPNGYQV-AT 366
Query: 307 SAEDGILNIWDHEKIGEKQDYGELKYPIIH 336
DGI+N+WD K +D G+L + H
Sbjct: 367 GGGDGIINVWDIRK----RDEGQLNQILAH 392
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 192 GHEDTVEDVQF-CPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPH 250
GH+ V + F C S CS G DS +LWD RSGS V H+ I+ V W+P+
Sbjct: 305 GHDKGVFSLSFQCDGSL--VCSGGMDSLSMLWDIRSGSK--VMTLAGHSKPIYTVAWSPN 360
Query: 251 DVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSP-DKSSVFGSSAE 309
+ TG D I+++D RK +G +++ H V V++S D S
Sbjct: 361 GYQ-VATGGGDGIINVWDIRK-RDEG---QLNQILAHRNIVTQVRFSKEDGGKKLVSCGY 415
Query: 310 DGILNIWDHE 319
D ++N++ +
Sbjct: 416 DNLINVYSSD 425
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 44/129 (34%), Positives = 59/129 (45%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH D V F P S D S LWD SG + E H+ + + D
Sbjct: 385 GHSDVVNRCSFHPCGRYITTSSNDKSWR-LWDLESGGKCLLDQE-GHSDGVMGISIQS-D 441
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+L+ TGS D + ++D R G PI F+GHS V+ V WSP+ + SS+ED
Sbjct: 442 GSLLATGSQDGLVRIWDLRS------GRPILYFQGHSKQVISVDWSPNGYQL-ASSSEDN 494
Query: 312 ILNIWDHEK 320
+ IWD K
Sbjct: 495 TVVIWDIRK 503
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 38/127 (29%), Positives = 59/127 (46%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS-GSTPAVKVEKAHNADIHCVDWNPHD 251
H V + P F S D L +WD R GST + AH+ +I DWN +D
Sbjct: 148 HAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP---AHDFEILSCDWNKYD 204
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
++ T S D ++ ++D R P+ GH AV V++SP + S+ S + D
Sbjct: 205 DCILATSSVDKTVKVWDVRSYRV-----PLAVLNGHGYAVRKVKFSPHRRSLIASCSYDM 259
Query: 312 ILNIWDH 318
+ +WD+
Sbjct: 260 SVCLWDY 266
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 35/131 (26%), Positives = 60/131 (45%)
Query: 195 DTVEDVQFCPSSAQE---FCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
D V DV C S + + ++GD S I A + ++ + H ++ VD+NP
Sbjct: 61 DAVYDV--CWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTR 118
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+ LT S D+++ ++ + S + F+ H+ V W+P VF S++ D
Sbjct: 119 RDSFLTSSWDDTVKLWAMDRPAS------VRTFKEHAYCVYQAVWNPKHGDVFASASGDC 172
Query: 312 ILNIWDHEKIG 322
L IWD + G
Sbjct: 173 TLRIWDVREPG 183
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/143 (25%), Positives = 62/143 (43%)
Query: 176 DKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPA-VKV 234
D L PS R + H V+ V + P+ F + D + LW + PA V+
Sbjct: 89 DTALPPPSNPIRS-FQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLW---AMDRPASVRT 144
Query: 235 EKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCV 294
K H ++ WNP ++ + S D ++ ++D R+ S + P H FE +L
Sbjct: 145 FKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMI-IPAHDFE-----ILSC 198
Query: 295 QWSPDKSSVFGSSAEDGILNIWD 317
W+ + +S+ D + +WD
Sbjct: 199 DWNKYDDCILATSSVDKTVKVWD 221
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 62/254 (24%), Positives = 109/254 (42%)
Query: 79 TIIHP-GEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVV 137
+I P GE NR R LPQN I+A + + I+D + + + SHP +
Sbjct: 124 SIFFPNGECNRARYLPQNPDIIAGASSDGAIYIFD-RTKHGSTRIRQSKISHPFETKLFG 182
Query: 138 LWSIQDHVSAL---AAEPGSAKSTASGGANSKNASKSGGNGDKPL--------ESPSIGA 186
+ V A+ +A+ A S A S NG + E+P I
Sbjct: 183 SHGVIQDVEAMDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDL 242
Query: 187 RGKYLGHEDT-VEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCV 245
+ + T V DV + P+ F + + + + L D R+ + H+ ++
Sbjct: 243 PLVSINSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNREKHDGGVNSC 302
Query: 246 DWNPHDVNLILTGSADNS-IHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVF 304
+N + +LIL + N ++++D R + SPI E H +V ++WSP+ +V
Sbjct: 303 RFN-YKNSLILASADSNGRLNLWDIRNMNK----SPIATME-HGTSVSTLEWSPNFDTVL 356
Query: 305 GSSA-EDGILNIWD 317
++ EDG++ +WD
Sbjct: 357 ATAGQEDGLVKLWD 370
Score = 136 (52.9 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 79/332 (23%), Positives = 142/332 (42%)
Query: 12 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRL--YLSEQFNEEA 69
+ +RY+ WK +LYD+L ++ WPSL+C++ P L+ + ++R L + S Q E+
Sbjct: 19 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDEHRILLSSFTSSQKPED- 77
Query: 70 RSPFVKKFKTIIHP--GEVNR--IREL---PQNS-KIVATHTDSPDVLIWDVEAQPNRHA 121
+ ++ K T+ H +N + E+ P+NS + + H + D+ I+ + NR
Sbjct: 78 ETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVN-DISIFFPNGECNRAR 136
Query: 122 VLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLES 181
L +PD ++ + D + T G + + S P E+
Sbjct: 137 YL---PQNPD----IIAGASSDGAIYIFDR------TKHGSTRIRQSKIS-----HPFET 178
Query: 182 PSIGARGKYLGHE--DTVE-DVQFCPSSA----QE--FCSVGDDSCLILWDAR--SGSTP 230
G+ G E DT D+ S A QE S + + +WD + S P
Sbjct: 179 KLFGSHGVIQDVEAMDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENP 238
Query: 231 AVKVEKAH-NAD---IHCVDWNP-HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFE 285
+ + N+D ++ V W P HD +L + N++ + D R + + S K
Sbjct: 239 IIDLPLVSINSDGTAVNDVTWMPTHD-SLFAACTEGNAVSLLDLRT-KKEKLQSNREK-- 294
Query: 286 GHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
H V +++ S + S+ +G LN+WD
Sbjct: 295 -HDGGVNSCRFNYKNSLILASADSNGRLNLWD 325
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 148 (57.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 40/127 (31%), Positives = 64/127 (50%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + V F P S + S D + LWD R+G A + H A ++ + W+ D
Sbjct: 371 GHQALINQVVFSPDS-RVIASASFDKSIKLWDGRTGKYLASL--RGHVAAVYQIAWSA-D 426
Query: 252 VNLILTGSADNSIHMFD--RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
L+++GS+D+++ ++D +KL++D GH+ V V WSPD V S +
Sbjct: 427 SRLLVSGSSDSTLKVWDVKAQKLSTD--------LPGHADEVYAVDWSPDGQRV-ASGGK 477
Query: 310 DGILNIW 316
D L IW
Sbjct: 478 DKCLRIW 484
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 35/110 (31%), Positives = 50/110 (45%)
Query: 208 QEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMF 267
+ S DD L LW P ++ H A I+ V ++P D +I + S D SI ++
Sbjct: 343 ERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVVFSP-DSRVIASASFDKSIKLW 400
Query: 268 DRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 401 DGR------TGKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 443
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 39/126 (30%), Positives = 60/126 (47%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH++ + V + S A+E CS D + +WD SGS +K N +C+ ++P
Sbjct: 255 GHKEAISSVLW--SDAEEICSASWDHTIGVWDVESGS---LKSTLTGNKVFNCISYSPLC 309
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
L +GS D I ++D R T DG + H+ V V+WSP S + D
Sbjct: 310 KRLA-SGSTDRHIRLWDPR--TKDGSLVSL-SLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 312 ILNIWD 317
I+ +WD
Sbjct: 366 IVKLWD 371
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 146 (56.5 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 45/190 (23%), Positives = 86/190 (45%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+D V D+ F P+ + S D L +WD ++V H ++C +P D
Sbjct: 151 GHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP-D 208
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+++ + + + S+ ++ R T I K EGH ++V+ +SPD + + +S +
Sbjct: 209 CSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDTS 262
Query: 312 ILNIWDHEKIGEKQ---DYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLT 368
++ +WD GE+ + +L+ P+ D D+ L S+ G L +
Sbjct: 263 VI-MWD-PYTGERLRSLHHTQLEAPV-------DDSDVHMSSLRSVCFSP-EGLYLATVA 312
Query: 369 MVKVLEIWRM 378
++L IW +
Sbjct: 313 DDRLLRIWAL 322
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 146 (56.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 40/126 (31%), Positives = 59/126 (46%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + V V + S A+E CS D + +WD SGS +K N +C+ ++P
Sbjct: 255 GHMEAVSSVLW--SDAEEICSASWDHTIRVWDVESGS---LKSTLTGNKVFNCISYSPLC 309
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
L +GS D I ++D R T DG + H+ V V+WSP S + D
Sbjct: 310 KRLA-SGSTDRHIRLWDPR--TKDGSLVSL-SLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 312 ILNIWD 317
I+ +WD
Sbjct: 366 IVKLWD 371
Score = 116 (45.9 bits), Expect = 0.00074, P = 0.00074
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H V V++ P+ Q+ S D+ + LWD RS P + AH + VDW D
Sbjct: 341 HTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLA-AHEDKVLSVDWT--DT 397
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGS 279
L+L+G ADN ++ + R T+ VG+
Sbjct: 398 GLLLSGGADNKLYSY-RYSPTTSHVGA 423
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 146 (56.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 40/126 (31%), Positives = 59/126 (46%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + V V + S A+E CS D + +WD SGS +K N +C+ ++P
Sbjct: 255 GHMEAVSSVLW--SDAEEICSASWDHTIRVWDVESGS---LKSTLTGNKVFNCISYSPLC 309
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
L +GS D I ++D R T DG + H+ V V+WSP S + D
Sbjct: 310 KRLA-SGSTDRHIRLWDPR--TKDGSLVSL-SLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 312 ILNIWD 317
I+ +WD
Sbjct: 366 IVKLWD 371
Score = 116 (45.9 bits), Expect = 0.00074, P = 0.00074
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H V V++ P+ Q+ S D+ + LWD RS P + AH + VDW D
Sbjct: 341 HTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLA-AHEDKVLSVDWT--DT 397
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGS 279
L+L+G ADN ++ + R T+ VG+
Sbjct: 398 GLLLSGGADNKLYSY-RYSPTTSHVGA 423
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 146 (56.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 40/127 (31%), Positives = 63/127 (49%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + V F P S + S D + LWD R+G A + H A ++ + W+ D
Sbjct: 321 GHQALINQVLFSPDS-RIIASASFDKSIKLWDGRTGKYLASL--RGHVAAVYQIAWSA-D 376
Query: 252 VNLILTGSADNSIHMFD--RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
L+++GS+D+++ ++D +KL +D GH+ V V WSPD V S +
Sbjct: 377 SRLLVSGSSDSTLKVWDVKAQKLAAD--------LPGHADEVYAVDWSPDGQRV-ASGGK 427
Query: 310 DGILNIW 316
D L IW
Sbjct: 428 DKCLRIW 434
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 34/110 (30%), Positives = 50/110 (45%)
Query: 208 QEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMF 267
+ S DD L +W P ++ H A I+ V ++P D +I + S D SI ++
Sbjct: 293 ERLVSGSDDFTLFMWSPAEDKKPLARMT-GHQALINQVLFSP-DSRIIASASFDKSIKLW 350
Query: 268 DRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 351 DGR------TGKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 393
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 146 (56.5 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 40/127 (31%), Positives = 63/127 (49%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + V F P S + S D + LWD R+G A + H A ++ + W+ D
Sbjct: 370 GHQALINQVLFSPDS-RIIASASFDKSIKLWDGRTGKYLASL--RGHVAAVYQIAWSA-D 425
Query: 252 VNLILTGSADNSIHMFD--RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
L+++GS+D+++ ++D +KL +D GH+ V V WSPD V S +
Sbjct: 426 SRLLVSGSSDSTLKVWDVKAQKLAAD--------LPGHADEVYAVDWSPDGQRV-ASGGK 476
Query: 310 DGILNIW 316
D L IW
Sbjct: 477 DKCLRIW 483
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 35/110 (31%), Positives = 50/110 (45%)
Query: 208 QEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMF 267
+ S DD L LW P ++ H A I+ V ++P D +I + S D SI ++
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVLFSP-DSRIIASASFDKSIKLW 399
Query: 268 DRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 400 DGR------TGKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 442
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH++ + V + S A+E CS D + +WD SGS +K N +C+ ++P
Sbjct: 255 GHKEAISSVLW--SDAEEICSASWDHTIKVWDVESGS---LKSTLTGNKVFNCISYSPLC 309
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
L +GS D I ++D R T DG + H+ V V+WSP S + D
Sbjct: 310 KRLA-SGSTDRHIRLWDPR--TKDGSLVSL-SLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 312 ILNIWD 317
++ +WD
Sbjct: 366 MVKLWD 371
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH++ + V + S A+E CS D + +WD SGS +K N +C+ ++P
Sbjct: 255 GHKEAISSVLW--SDAEEICSASWDHTIRVWDVESGS---LKSTLTGNKVFNCISYSPLC 309
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
L +GS D I ++D R T DG + H+ V ++WSP S + D
Sbjct: 310 KRLA-SGSTDRHIRLWDPR--TKDGSLVSL-SLTSHTGWVTSLKWSPTHEQQLISGSLDN 365
Query: 312 ILNIWD 317
I+ +WD
Sbjct: 366 IVKLWD 371
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 147 (56.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
Y GH V D+ P S F S D LW T +++ H AD+ CV ++P
Sbjct: 376 YQGHAYPVWDLDISPHSLY-FASASHDRTARLWSF--DRTYPLRIYAGHLADVDCVKFHP 432
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ N + TGS D ++ ++ ++ G+ + F GH VL + +SP+ S+ E
Sbjct: 433 NS-NYLATGSTDKTVRLWSTQQ------GNSVRLFTGHRGPVLSLAFSPN-GKYLASAGE 484
Query: 310 DGILNIWD 317
D L +WD
Sbjct: 485 DQRLKLWD 492
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 53/195 (27%), Positives = 89/195 (45%)
Query: 110 IWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNAS 169
+WD++ P H++ A+ SH D++ LWS D L G + +
Sbjct: 383 VWDLDISP--HSLYFASASH---DRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNY 436
Query: 170 KSGGNGDKPLE--SPSIGARGK-YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS 226
+ G+ DK + S G + + GH V + F P+ + S G+D L LWD S
Sbjct: 437 LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLAS 495
Query: 227 GSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRK----LTSDGVGSP-I 281
G+ K + H +I + ++P D +L+ + S DNS+ ++D R +DG S +
Sbjct: 496 GTL--YKELRGHTDNITSLTFSP-DSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELV 552
Query: 282 HKFEGHSAAVLCVQW 296
+ G + VL VQ+
Sbjct: 553 GVYTGQMSNVLSVQF 567
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 147 (56.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 57/237 (24%), Positives = 99/237 (41%)
Query: 91 ELPQNSKIVATHTDSPDVLIWDVEAQ---PNRHAVLGAADSHPDLDQSVVLWSIQDHVSA 147
E+ SK++A D+ + +W + ++ P H V + H D +L D
Sbjct: 275 EISPESKLLAAGFDNSCIKLWSLRSKKLKPEPHRV-DVSRIHLACD---ILEEEDDEDDD 330
Query: 148 LAAEPGSAKSTASGGANSKNASKSGG----NGDKPLESPSIGARGK---YLGHEDTVEDV 200
+ E + +++ + S G + D + +G+ Y GH V DV
Sbjct: 331 VGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV 390
Query: 201 QFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSA 260
P S F S D LW T +++ H AD+ CV ++P+ N + TGS
Sbjct: 391 DISPYSLY-FASGSHDRTARLWSF--DRTYPLRIYAGHLADVDCVKFHPNS-NYLATGST 446
Query: 261 DNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
D ++ ++ ++ G+ + F GH VL + +SP+ S+ ED L +WD
Sbjct: 447 DKTVRLWSAQQ------GNSVRLFTGHRGPVLSLAFSPN-GKYLASAGEDQRLKLWD 496
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 54/195 (27%), Positives = 89/195 (45%)
Query: 110 IWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNAS 169
+WDV+ P +++ A+ SH D++ LWS D L G + +
Sbjct: 387 VWDVDISP--YSLYFASGSH---DRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 170 KSGGNGDKPLE--SPSIGARGK-YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS 226
+ G+ DK + S G + + GH V + F P+ + S G+D L LWD S
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLAS 499
Query: 227 GSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKL----TSDGVGSP-I 281
G+ K + H +I + ++P D +LI + S DNS+ ++D R +DG S +
Sbjct: 500 GTL--FKELRGHTDNITSLTFSP-DSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELV 556
Query: 282 HKFEGHSAAVLCVQW 296
+ G + VL VQ+
Sbjct: 557 GVYTGQMSNVLSVQF 571
Score = 117 (46.2 bits), Expect = 0.00094, P = 0.00094
Identities = 35/129 (27%), Positives = 65/129 (50%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
Y GH V+ V+F P+S + + G D + LW A+ G++ V++ H + + ++
Sbjct: 422 YAGHLADVDCVKFHPNS--NYLATGSTDKTVRLWSAQQGNS--VRLFTGHRGPVLSLAFS 477
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P+ L G D + ++D L S G+ + GH+ + + +SPD SS+ S++
Sbjct: 478 PNGKYLASAGE-DQRLKLWD---LAS---GTLFKELRGHTDNITSLTFSPD-SSLIASAS 529
Query: 309 EDGILNIWD 317
D + +WD
Sbjct: 530 MDNSVRVWD 538
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 147 (56.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 39/128 (30%), Positives = 60/128 (46%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
Y GH V DV P S F S D LW T +++ H AD+ CV ++P
Sbjct: 380 YQGHAYPVWDVDISPFSLY-FASGSHDRTARLWSF--DRTYPLRIYAGHLADVDCVKFHP 436
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ N + TGS D ++ ++ ++ G+ + F GH VL + +SP+ S+ E
Sbjct: 437 NS-NYLATGSTDKTVRLWSAQQ------GNSVRLFTGHRGPVLSLSFSPN-GKYLASAGE 488
Query: 310 DGILNIWD 317
D L +WD
Sbjct: 489 DQRLKLWD 496
Score = 137 (53.3 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 54/195 (27%), Positives = 86/195 (44%)
Query: 110 IWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNAS 169
+WDV+ P ++ A+ SH D++ LWS D L G + +
Sbjct: 387 VWDVDISP--FSLYFASGSH---DRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 170 KSGGNGDKPLE--SPSIGARGK-YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS 226
+ G+ DK + S G + + GH V + F P+ + S G+D L LWD S
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNG-KYLASAGEDQRLKLWDLAS 499
Query: 227 GSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLT----SDGV-GSPI 281
G+ K + H I + ++P D LI + S DNS+ ++D R +DG G +
Sbjct: 500 GTL--FKELRGHTDSITSLAFSP-DSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELV 556
Query: 282 HKFEGHSAAVLCVQW 296
+ G + VL VQ+
Sbjct: 557 GVYTGQMSNVLSVQF 571
Score = 118 (46.6 bits), Expect = 0.00073, P = 0.00073
Identities = 34/129 (26%), Positives = 65/129 (50%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
Y GH V+ V+F P+S + + G D + LW A+ G++ V++ H + + ++
Sbjct: 422 YAGHLADVDCVKFHPNS--NYLATGSTDKTVRLWSAQQGNS--VRLFTGHRGPVLSLSFS 477
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P+ L G D + ++D L S G+ + GH+ ++ + +SPD S + S++
Sbjct: 478 PNGKYLASAGE-DQRLKLWD---LAS---GTLFKELRGHTDSITSLAFSPD-SGLIASAS 529
Query: 309 EDGILNIWD 317
D + +WD
Sbjct: 530 MDNSVRVWD 538
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 145 (56.1 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 40/127 (31%), Positives = 63/127 (49%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + V F P S + S D + LWD R+G A + H A ++ + W+ D
Sbjct: 370 GHQALINQVLFSPDS-RIVASASFDKSIKLWDGRTGKYLASL--RGHVAAVYQIAWSA-D 425
Query: 252 VNLILTGSADNSIHMFD--RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
L+++GS+D+++ ++D +KL +D GH+ V V WSPD V S +
Sbjct: 426 SRLLVSGSSDSTLKVWDVKAQKLATD--------LPGHADEVYAVDWSPDGQRV-ASGGK 476
Query: 310 DGILNIW 316
D L IW
Sbjct: 477 DKCLRIW 483
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 34/110 (30%), Positives = 50/110 (45%)
Query: 208 QEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMF 267
+ S DD L LW P ++ H A I+ V ++P D ++ + S D SI ++
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVLFSP-DSRIVASASFDKSIKLW 399
Query: 268 DRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 400 DGR------TGKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 442
>UNIPROTKB|Q9NQW1 [details] [associations]
symbol:SEC31B "Protein transport protein Sec31B"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0044432 "endoplasmic reticulum part"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0015031 EMBL:AL133352 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 EMBL:AF274863 EMBL:AL080141
EMBL:BX640914 EMBL:BC034946 EMBL:BC044569 EMBL:BC144313
IPI:IPI00023442 IPI:IPI00426029 IPI:IPI00853086 IPI:IPI00923389
IPI:IPI00954279 PIR:T12526 RefSeq:NP_056305.1 UniGene:Hs.18889
ProteinModelPortal:Q9NQW1 SMR:Q9NQW1 IntAct:Q9NQW1 STRING:Q9NQW1
PhosphoSite:Q9NQW1 DMDM:74762753 PaxDb:Q9NQW1 PRIDE:Q9NQW1
DNASU:25956 Ensembl:ENST00000370345 Ensembl:ENST00000451524
GeneID:25956 KEGG:hsa:25956 UCSC:uc001krc.1 UCSC:uc010qpo.1
CTD:25956 GeneCards:GC10M102237 HGNC:HGNC:23197 HPA:HPA035882
HPA:HPA040819 MIM:610258 neXtProt:NX_Q9NQW1 PharmGKB:PA162402792
InParanoid:Q9NQW1 OMA:RLECLYE OrthoDB:EOG470TGM PhylomeDB:Q9NQW1
ChiTaRS:SEC31B GenomeRNAi:25956 NextBio:47564 ArrayExpress:Q9NQW1
Bgee:Q9NQW1 CleanEx:HS_SEC31B Genevestigator:Q9NQW1 Uniprot:Q9NQW1
Length = 1179
Score = 127 (49.8 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 211 CSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDR 269
CS D +I LWD R S+P +KV ++H+ I V W+ D L+LT + D+ I
Sbjct: 232 CSEDDRLPVIQLWDLRFASSP-LKVLESHSRGILSVSWSQADAELLLTSAKDSQILC--- 287
Query: 270 RKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
R L S V ++K S+ VQW P SVF +++ +G ++++
Sbjct: 288 RNLGSSEV---VYKLPTQSSWCFDVQWCPRDPSVFSAASFNGWISLY 331
Score = 71 (30.1 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSI 141
H G V + P ++A+ ++ IWD+ N LG+ P D + W+
Sbjct: 120 HTGAVRALDLNPFQGNLLASGASDSEIFIWDLN-NLNVPMTLGSKSQQPPEDIKALSWNR 178
Query: 142 Q-DHVSALAAEPGSA 155
Q H+ + A G A
Sbjct: 179 QAQHILSSAHPSGKA 193
Score = 42 (19.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 83 PGEVNRIRELPQNSKIVATHTDSPDVLIWDVEA-QP--------NRHAVLGAADSHPDLD 133
P ++ + Q I+++ S ++WD+ +P NR G A HPD+
Sbjct: 168 PEDIKALSWNRQAQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGLA-WHPDIA 226
Query: 134 QSVVLWSIQDHVSAL 148
+VL S D + +
Sbjct: 227 TQLVLCSEDDRLPVI 241
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 145 (56.1 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 51/195 (26%), Positives = 85/195 (43%)
Query: 128 SHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGAR 187
S P+LD+++ L + VS + PG+ ++ A S N + G G L S S
Sbjct: 234 SIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVSAESVNLATGGAEGQVNLWSLSQDTP 293
Query: 188 GKYL-GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVD 246
L GH V V F PS + S +D+ LWD + + +++ H+ + V
Sbjct: 294 LATLSGHTQRVCRVDFHPSG-RFLASASEDTSWRLWDVEKRTE--LLLQEGHSRGVFAVS 350
Query: 247 WNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
+N D +L+ + D+ ++D R T + +GH + + W D V +
Sbjct: 351 FNG-DGSLLASAGQDSIGRIWDLR--TGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSA 407
Query: 307 SAEDGILNIWDHEKI 321
SA DG + WD K+
Sbjct: 408 SA-DGWIKCWDVRKV 421
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 135 (52.6 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 56/209 (26%), Positives = 87/209 (41%)
Query: 145 VSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLG-HEDTVEDVQFC 203
V A A P S + A GG ++K S DK + ++ A+ K + H + + F
Sbjct: 108 VMACAYAP-SGCAIACGGLDNK-CSVYPLTFDK---NENMAAKKKSVAMHTNYLSACSFT 162
Query: 204 PSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV-NLILTGSADN 262
S Q+ + D LWD SG ++ H AD+ C+D P + N ++G D
Sbjct: 163 NSDMQQILTASGDGTCALWDVESGQL--LQSFHGHGADVLCLDLAPSETGNTFVSGGCDK 220
Query: 263 SIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIG 322
++D R G I FE H + + V++ P F S ++D ++D
Sbjct: 221 KAMVWDMRS------GQCIQAFETHESDINSVRYYPS-GDAFASGSDDATCRLYDLRADR 273
Query: 323 EKQDYGELKYPIIHPAYSSDMLDIETKLL 351
E Y K II A S D + +LL
Sbjct: 274 EVAIYS--KESIIFGASSVDF-SLSGRLL 299
Score = 47 (21.6 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 68 EARSPFVKKFKTII--HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAV 122
EA FV K + + H +V + +IV++ D V++WD HAV
Sbjct: 46 EALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGK-VIVWDSFTTNKEHAV 101
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 143 (55.4 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 43/142 (30%), Positives = 66/142 (46%)
Query: 179 LESPSIGARGK--YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEK 236
L PS+ + K GH+ V V F P + S D + LW+ +G V V +
Sbjct: 343 LWEPSVSKQPKKRLTGHQQLVNHVYFSPDG-KWIASASFDKSVRLWNGITGQF--VTVFR 399
Query: 237 AHNADIHCVDWNPHDVNLILTGSADNSIHMFDRR--KLTSDGVGSPIHKFEGHSAAVLCV 294
H ++ V W+ D L+L+GS D+++ +++ R KL D GH+ V V
Sbjct: 400 GHVGPVYQVSWSA-DSRLLLSGSKDSTLKIWEIRTKKLKQD--------LPGHADEVFAV 450
Query: 295 QWSPDKSSVFGSSAEDGILNIW 316
WSPD V S +D +L +W
Sbjct: 451 DWSPDGEKVV-SGGKDRVLKLW 471
Score = 116 (45.9 bits), Expect = 0.00089, P = 0.00088
Identities = 39/130 (30%), Positives = 58/130 (44%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + V V F P Q S D+ + LWD + TP K H + V W+P
Sbjct: 107 GHAEAVLCVSFSPDGKQ-LASGSGDTTVRLWDLYT-ETPLFTC-KGHKNWVLTVAWSPDG 163
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSV----FGSS 307
+L+ +GS I ++ +K + GSP+ GH + + W P S F +S
Sbjct: 164 KHLV-SGSKSGEICCWNPKK--GELEGSPL---TGHKKWITGISWEPVHLSSPCRRFVTS 217
Query: 308 AEDGILNIWD 317
++DG IWD
Sbjct: 218 SKDGDARIWD 227
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 143 (55.4 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 40/127 (31%), Positives = 62/127 (48%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + V F P S + S D + LWD R+G A + H A ++ + W+ D
Sbjct: 370 GHQALINQVLFSPDS-RIVASASFDKSIKLWDGRTGKYLASL--RGHVAAVYQIAWSA-D 425
Query: 252 VNLILTGSADNSIHMFD--RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
L+++GS+D+++ ++D +KL D GH+ V V WSPD V S +
Sbjct: 426 SRLLVSGSSDSTLKVWDVKAQKLAMD--------LPGHADEVYAVDWSPDGQRV-ASGGK 476
Query: 310 DGILNIW 316
D L IW
Sbjct: 477 DKCLRIW 483
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 34/110 (30%), Positives = 50/110 (45%)
Query: 208 QEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMF 267
+ S DD L LW P ++ H A I+ V ++P D ++ + S D SI ++
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLTRMT-GHQALINQVLFSP-DSRIVASASFDKSIKLW 399
Query: 268 DRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 400 DGR------TGKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 442
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 142 (55.0 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 38/126 (30%), Positives = 58/126 (46%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + + V + S A+E CS D + +WD SG +K N +C+ ++P
Sbjct: 255 GHTEAISSVLW--SDAEEICSASWDHTIRVWDVESGG---LKSTLTGNKVFNCISYSPLC 309
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
L +GS D I ++D R T DG + H+ V V+WSP S + D
Sbjct: 310 KRLA-SGSTDRHIRLWDPR--TKDGSLVSL-SLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 312 ILNIWD 317
I+ +WD
Sbjct: 366 IVKLWD 371
Score = 115 (45.5 bits), Expect = 0.00097, P = 0.00097
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H V V++ P+ Q+ S D+ + LWD RS P + AH + VDW D
Sbjct: 341 HTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLA-AHEDKVLSVDWT--DT 397
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGS 279
L+L+G ADN ++ + TS VG+
Sbjct: 398 GLLLSGGADNKLYSYSYSPTTSH-VGA 423
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/132 (28%), Positives = 61/132 (46%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH T+ F P ++ + D+ +WD + TP + K H + CV W+P D
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDT-QTP-MHTLKGHYNWVLCVSWSP-D 197
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSP------DKSSVFG 305
+I TGS DN+I ++D + + +G + GHS + + W P
Sbjct: 198 GEVIATGSMDNTIRLWDPK--SGQCLGDALR---GHSKWITSLSWEPIHLVKPGSKPRLA 252
Query: 306 SSAEDGILNIWD 317
SS++DG + IWD
Sbjct: 253 SSSKDGTIKIWD 264
Score = 137 (53.3 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 60/232 (25%), Positives = 93/232 (40%)
Query: 108 VLIWDVEAQPNRHAVLGAAD---SHPDLDQSVVLW-SIQDHVSALAAEPGSAKSTASGGA 163
V +WD+ +Q +L + +H L L DH + P A+ A
Sbjct: 301 VRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKAL--E 358
Query: 164 NSKNASKSGGNGDK---------------PLESPSIGARGKYLGHEDTVEDVQFCPSSAQ 208
N + K GN ++ PL+S AR GH+ V V F P +
Sbjct: 359 NYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIAR--MTGHQKLVNHVAFSPDG-R 415
Query: 209 EFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFD 268
S D+ + LWD R G + + H A ++ V W+ D L+++ S D ++ ++D
Sbjct: 416 YIVSASFDNSIKLWDGRDGKF--ISTFRGHVASVYQVAWSS-DCRLLVSCSKDTTLKVWD 472
Query: 269 --RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDH 318
RKL+ D GH V V WS D V S +D ++ +W H
Sbjct: 473 VRTRKLSVD--------LPGHKDEVYTVDWSVDGKRVC-SGGKDKMVRLWTH 515
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 29/86 (33%), Positives = 45/86 (52%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
H + I C + PH + ++TG+ DN+ ++D T P+H +GH VLCV WS
Sbjct: 142 HGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQT------PMHTLKGHYNWVLCVSWS 195
Query: 298 PDKSSVFGSSAEDGILNIWDHEKIGE 323
PD V + + D + +WD K G+
Sbjct: 196 PD-GEVIATGSMDNTIRLWD-PKSGQ 219
Score = 42 (19.8 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 93 PQNSKIVATHTDSPDVLIWDVEAQPNRHAVLG 124
P S + T IWD + Q H + G
Sbjct: 153 PHTSSRMVTGAGDNTARIWDCDTQTPMHTLKG 184
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 135 (52.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 56/209 (26%), Positives = 87/209 (41%)
Query: 145 VSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLG-HEDTVEDVQFC 203
V A A P S + A GG ++K S DK + ++ A+ K + H + + F
Sbjct: 150 VMACAYAP-SGCAIACGGLDNK-CSVYPLTFDK---NENMAAKKKSVAMHTNYLSACSFT 204
Query: 204 PSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV-NLILTGSADN 262
S Q+ + D LWD SG ++ H AD+ C+D P + N ++G D
Sbjct: 205 NSDMQQILTASGDGTCALWDVESGQL--LQSFHGHGADVLCLDLAPSETGNTFVSGGCDK 262
Query: 263 SIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIG 322
++D R G I FE H + + V++ P F S ++D ++D
Sbjct: 263 KAMVWDMRS------GQCIQAFETHESDINSVRYYPS-GDAFASGSDDATCRLYDLRADR 315
Query: 323 EKQDYGELKYPIIHPAYSSDMLDIETKLL 351
E Y K II A S D + +LL
Sbjct: 316 EVAIYS--KESIIFGASSVDF-SLSGRLL 341
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 68 EARSPFVKKFKTII--HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAV 122
EA FV K + + H +V + +IV++ D V++WD HAV
Sbjct: 88 EALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGK-VIVWDSFTTNKEHAV 143
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 37/128 (28%), Positives = 59/128 (46%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
Y GH V D+ P S F S D LW T +++ H D+ CV ++P
Sbjct: 380 YQGHAYPVWDLDISPCSLY-FASASHDRTARLWSF--DRTYPLRIYAGHLLDVDCVKFHP 436
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ N + TGS D ++ ++ ++ G+ + F GH VL + +SP+ S+ E
Sbjct: 437 NS-NYLATGSTDKTVRLWSTQQ------GNSVRLFTGHRGPVLALAFSPN-GKYLASAGE 488
Query: 310 DGILNIWD 317
D L +WD
Sbjct: 489 DQRLKLWD 496
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 45/164 (27%), Positives = 75/164 (45%)
Query: 110 IWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNAS 169
+WD++ P ++ A+ SH D++ LWS D L G + +
Sbjct: 387 VWDLDISPC--SLYFASASH---DRTARLWSF-DRTYPLRIYAGHLLDVDCVKFHPNSNY 440
Query: 170 KSGGNGDKPLE--SPSIGARGK-YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS 226
+ G+ DK + S G + + GH V + F P+ + S G+D L LWD S
Sbjct: 441 LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG-KYLASAGEDQRLKLWDLAS 499
Query: 227 GSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRR 270
G+ K + H +I + ++P D +LI + S DNS+ ++D R
Sbjct: 500 GTL--YKELRGHTDNITSLTFSP-DSSLIASASMDNSVRVWDIR 540
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 34/135 (25%), Positives = 66/135 (48%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
Y H++ + + F P+ ++ F S DD L +WD +V + H AD+ CV W+P
Sbjct: 225 YQAHKEAIRGISFSPTDSK-FVSGSDDGTLRIWDFMRCQEE--RVLRGHGADVKCVHWHP 281
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+I++GS DN + K+ G + H + V+ ++W+ D + +++
Sbjct: 282 QK-GMIVSGSKDNQQPI----KIWDPKSGIALATLHAHKSTVMDLKWN-DNGNWLVTASR 335
Query: 310 DGILNIWDHEKIGEK 324
D +L ++D + E+
Sbjct: 336 DHLLKLFDIRNLREE 350
Score = 130 (50.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 37/138 (26%), Positives = 60/138 (43%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPH 250
GH V+ V + P D+ I +WD +SG A+ AH + + + WN +
Sbjct: 269 GHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGI--ALATLHAHKSTVMDLKWNDN 326
Query: 251 DVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAED 310
N ++T S D+ + +FD R L + + F GH V W P +F S D
Sbjct: 327 G-NWLVTASRDHLLKLFDIRNLREE-----VQVFRGHKKEASSVSWHPIHEGLFCSGGSD 380
Query: 311 GILNIWDHEKIGEKQDYG 328
G + W+ +G ++ G
Sbjct: 381 GSILFWN---VGTDKEIG 395
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 37/126 (29%), Positives = 58/126 (46%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + V V + S E CS D + +WD +G+ VK A N +C+ ++P
Sbjct: 255 GHSEAVSSVLW--SDVDEICSASWDHNIKIWDVETGT---VKSTLAGNKVFNCISYSPLS 309
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
L +GS D I ++D R + DG + H+ V V+WSP S + D
Sbjct: 310 QRLA-SGSTDRHIRLWDPR--SKDG-SLVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDK 365
Query: 312 ILNIWD 317
++ +WD
Sbjct: 366 LVKLWD 371
Score = 115 (45.5 bits), Expect = 0.00097, P = 0.00097
Identities = 30/87 (34%), Positives = 43/87 (49%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H V V++ PS Q+ S D + LWD RS P + AH+ + VDW D
Sbjct: 341 HTGWVTSVKWSPSHEQQLVSGSLDKLVKLWDTRSCKAPLYDLA-AHSDKVLSVDWT--DA 397
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGS 279
LIL+G +DN ++ + SD VG+
Sbjct: 398 GLILSGGSDNKLYSYRYTASLSD-VGA 423
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/184 (27%), Positives = 89/184 (48%)
Query: 139 WSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL---GHED 195
W +Q+ + A + S G A+ + + +GG+ D + SI + GH
Sbjct: 11 WKLQE----IVAHASNVSSLVLGKASGRLLA-TGGD-DCRVNLWSINKPNCIMSLTGHTS 64
Query: 196 TVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNL 254
VE V+ ++ +E G S I +WD + ++ H A+I +D++P+
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPYG-EF 119
Query: 255 ILTGSADNSIHMFD-RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
+ +GS D +I ++D RRK G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRRK----GC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTV 171
Query: 314 NIWD 317
+WD
Sbjct: 172 KLWD 175
Score = 119 (46.9 bits), Expect = 0.00056, P = 0.00056
Identities = 50/194 (25%), Positives = 89/194 (45%)
Query: 133 DQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKN-----ASKSGGNGDKPLESPSIGAR 187
D V LWSI + + + + G S N+ S+SG LE+ I R
Sbjct: 42 DCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI-LR 99
Query: 188 GKYLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVD 246
+GH+ + + F P EF + G D+ + LWD R V + H+ + C+
Sbjct: 100 -TLMGHKANICSLDFHPYG--EFVASGSQDTNIKLWDIRRKG--CVFRYRGHSQAVRCLR 154
Query: 247 WNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
++P D + + + D+++ ++D LT+ G + +F GH+ V V++ P++ + S
Sbjct: 155 FSP-DGKWLASAADDHTVKLWD---LTA---GKMMSEFPGHTGPVNVVEFHPNEY-LLAS 206
Query: 307 SAEDGILNIWDHEK 320
+ D + WD EK
Sbjct: 207 GSSDRTIRFWDLEK 220
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
Y GH V D+ P S F S D LW T +++ H AD+ CV ++P
Sbjct: 380 YQGHAYPVWDLDISPYSLY-FASGSHDRTARLWSF--DRTYPLRIYAGHLADVDCVKFHP 436
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ N + TGS D ++ ++ ++ G+ + F GH VL + +SP+ S+ E
Sbjct: 437 NS-NYLATGSTDKTVRLWSAQQ------GNSVRLFTGHRGPVLSLAFSPN-GKYLASAGE 488
Query: 310 DGILNIWD 317
D L +WD
Sbjct: 489 DQRLKLWD 496
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 53/195 (27%), Positives = 88/195 (45%)
Query: 110 IWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNAS 169
+WD++ P +++ A+ SH D++ LWS D L G + +
Sbjct: 387 VWDLDISP--YSLYFASGSH---DRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 170 KSGGNGDKPLE--SPSIGARGK-YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS 226
+ G+ DK + S G + + GH V + F P+ + S G+D L LWD S
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLAS 499
Query: 227 GSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKL----TSDGVGSP-I 281
G+ K + H +I + ++P D LI + S DNS+ ++D R +DG S +
Sbjct: 500 GTL--YKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELV 556
Query: 282 HKFEGHSAAVLCVQW 296
+ G + VL VQ+
Sbjct: 557 GVYTGQMSNVLSVQF 571
>CGD|CAL0000686 [details] [associations]
symbol:PEX7 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA;ISO] [GO:0016560
"protein import into peroxisome matrix, docking" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000686 GO:GO:0005829 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000106 EMBL:AACQ01000112 GO:GO:0016560 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
RefSeq:XP_714022.1 RefSeq:XP_714298.1 ProteinModelPortal:Q59WW3
STRING:Q59WW3 GeneID:3644027 GeneID:3644322 KEGG:cal:CaO19.7735
KEGG:cal:CaO19.89 Uniprot:Q59WW3
Length = 380
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/201 (24%), Positives = 81/201 (40%)
Query: 133 DQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLG 192
D ++ LWS S L + N+ +AS + +P P + + +
Sbjct: 126 DGNIKLWSPNRPQSLLTLNSNVMDYSTRVAPNAGSASVPLSH--QPAHQPQ-QQQQQQVN 182
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
+ + QF P S S S + +WD RS + +K + VDWN +
Sbjct: 183 TANCIYSAQFSPHSPSMVVSCNGGSQVQVWDVRSPNPLQLKFTAHGGLEALSVDWNKYKS 242
Query: 253 NLILTGSADNSIHMFDRRKLTS-D--------GVG-----SPIHKFEGHSAAVLCVQWSP 298
+I +G D S+ ++D R +T D G +P+++ GH AV VQWSP
Sbjct: 243 TVIASGGTDKSVRIWDLRSITKIDQPIAQSPMASGHIRGPTPLNELIGHEFAVRRVQWSP 302
Query: 299 DKSSVFGSSAEDGILNIWDHE 319
S++ D IW+ E
Sbjct: 303 HNPKELMSTSYDMTARIWNDE 323
>UNIPROTKB|Q59WW3 [details] [associations]
symbol:PEX7 "Potential intraperoxisomal protein receptor
Pex7" species:237561 "Candida albicans SC5314" [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0016560 "protein import into peroxisome matrix,
docking" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000686 GO:GO:0005829
GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000106 EMBL:AACQ01000112 GO:GO:0016560 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
RefSeq:XP_714022.1 RefSeq:XP_714298.1 ProteinModelPortal:Q59WW3
STRING:Q59WW3 GeneID:3644027 GeneID:3644322 KEGG:cal:CaO19.7735
KEGG:cal:CaO19.89 Uniprot:Q59WW3
Length = 380
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/201 (24%), Positives = 81/201 (40%)
Query: 133 DQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLG 192
D ++ LWS S L + N+ +AS + +P P + + +
Sbjct: 126 DGNIKLWSPNRPQSLLTLNSNVMDYSTRVAPNAGSASVPLSH--QPAHQPQ-QQQQQQVN 182
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
+ + QF P S S S + +WD RS + +K + VDWN +
Sbjct: 183 TANCIYSAQFSPHSPSMVVSCNGGSQVQVWDVRSPNPLQLKFTAHGGLEALSVDWNKYKS 242
Query: 253 NLILTGSADNSIHMFDRRKLTS-D--------GVG-----SPIHKFEGHSAAVLCVQWSP 298
+I +G D S+ ++D R +T D G +P+++ GH AV VQWSP
Sbjct: 243 TVIASGGTDKSVRIWDLRSITKIDQPIAQSPMASGHIRGPTPLNELIGHEFAVRRVQWSP 302
Query: 299 DKSSVFGSSAEDGILNIWDHE 319
S++ D IW+ E
Sbjct: 303 HNPKELMSTSYDMTARIWNDE 323
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
Y GH V D+ P S F S D LW T +++ H AD+ CV ++P
Sbjct: 398 YQGHAYPVWDLDISPYSLY-FASGSHDRTARLWSF--DRTYPLRIYAGHLADVDCVKFHP 454
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ N + TGS D ++ ++ ++ G+ + F GH VL + +SP+ S+ E
Sbjct: 455 NS-NYLATGSTDKTVRLWSAQQ------GNSVRLFTGHRGPVLSLAFSPN-GKYLASAGE 506
Query: 310 DGILNIWD 317
D L +WD
Sbjct: 507 DQRLKLWD 514
Score = 139 (54.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 53/195 (27%), Positives = 89/195 (45%)
Query: 110 IWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNAS 169
+WD++ P +++ A+ SH D++ LWS D L G + +
Sbjct: 405 VWDLDISP--YSLYFASGSH---DRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNY 458
Query: 170 KSGGNGDKPLE--SPSIGARGK-YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS 226
+ G+ DK + S G + + GH V + F P+ + S G+D L LWD S
Sbjct: 459 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLAS 517
Query: 227 GSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKL----TSDGV-GSPI 281
G+ K + H +I + ++P D +LI + S DNS+ ++D R +DG G +
Sbjct: 518 GTL--YKELRGHTDNITSLTFSP-DSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELV 574
Query: 282 HKFEGHSAAVLCVQW 296
+ G + VL VQ+
Sbjct: 575 GVYTGQMSNVLSVQF 589
>DICTYBASE|DDB_G0276797 [details] [associations]
symbol:lysA "peptidoglycan-binding LysM
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR002482 InterPro:IPR015943 InterPro:IPR018392
Pfam:PF00400 Pfam:PF01476 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00257 SMART:SM00320 dictyBase:DDB_G0276797
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 GO:GO:0016998 InterPro:IPR006571 Pfam:PF07534
SMART:SM00584 RefSeq:XP_642883.1 ProteinModelPortal:Q7KWK0
EnsemblProtists:DDB0185074 GeneID:8620749 KEGG:ddi:DDB_G0276797
InParanoid:Q7KWK0 OMA:HIRHITS Uniprot:Q7KWK0
Length = 1405
Score = 147 (56.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 47/186 (25%), Positives = 82/186 (44%)
Query: 143 DHVSALAAEPGSAKSTASGGANSKNASKSGGNG---DKPLESPSIGARGKYLGHEDTVED 199
D +S + S+ + + G +S ++S S P +P I + K E +
Sbjct: 60 DKISIIDEASSSSNNISKGFLSSHHSSSSSSTTTTTSSPTTTPCIFKKLKSNSKEIECDL 119
Query: 200 VQFCPSSAQEFCSVGD---DSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLIL 256
+++ + ++ V D + LW+ R VK K+H I + WN + NLI
Sbjct: 120 LKWSTNKSESHLLVSSSLKDYSIYLWNVRDEKL-IVKFSKSHIRHITSLSWNTQETNLIA 178
Query: 257 TGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
+ S+D ++FD R+ T G G F+ S + + W+P+ S++ +S NIW
Sbjct: 179 SASSDCMANIFDIRERTQ-GSGGISTNFKARSN-LSQIAWNPNSSTMLATSNASEF-NIW 235
Query: 317 DHEKIG 322
D K G
Sbjct: 236 DIRKFG 241
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/198 (25%), Positives = 87/198 (43%)
Query: 151 EPGSAKSTASGGANSKNASKSGGNGDKPL---ESPSIGARGKYL----GHEDTVEDVQFC 203
+PGS++ S A +SGG G+ +P + + L GH + +F
Sbjct: 11 DPGSSQLVKRQNVGSSTA-RSGGYGESSALIQAAPRLSSLQAPLMELSGHSGEIFCAKF- 68
Query: 204 PSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADN 262
+SA ++ + G D ++LW A +G + H I + W+ D ++I + SAD
Sbjct: 69 -NSAGQYIASGSMDRSILLWRA-NGDCENYGILSGHRGAILDLQWS-RDSDIIFSASADM 125
Query: 263 SIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIG 322
+ +D LT+ G I ++ GH + + S + S ++DG + IWD K
Sbjct: 126 HLASWD---LTT---GERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDPRK-K 178
Query: 323 EKQDYGELKYPIIHPAYS 340
DY E +P+ A S
Sbjct: 179 HAADYIESDFPVTAVAIS 196
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 50/184 (27%), Positives = 89/184 (48%)
Query: 139 WSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL---GHED 195
W +Q+ + A + S G A+ + + +GG+ D + SI + GH
Sbjct: 11 WKLQE----IVAHASNVSSLVLGKASGRLLA-TGGD-DCRVNLWSINKPNCIMSLTGHTS 64
Query: 196 TVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNL 254
VE V+ ++ +E G S I +WD + ++ H A+I +D++P+
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPYG-EF 119
Query: 255 ILTGSADNSIHMFD-RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
+ +GS D +I ++D RRK G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRRK----GC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTV 171
Query: 314 NIWD 317
+WD
Sbjct: 172 KLWD 175
Score = 119 (46.9 bits), Expect = 0.00066, P = 0.00066
Identities = 50/194 (25%), Positives = 89/194 (45%)
Query: 133 DQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKN-----ASKSGGNGDKPLESPSIGAR 187
D V LWSI + + + + G S N+ S+SG LE+ I R
Sbjct: 42 DCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI-LR 99
Query: 188 GKYLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVD 246
+GH+ + + F P EF + G D+ + LWD R V + H+ + C+
Sbjct: 100 -TLMGHKANICSLDFHPYG--EFVASGSQDTNIKLWDIRRKG--CVFRYRGHSQAVRCLR 154
Query: 247 WNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
++P D + + + D+++ ++D LT+ G + +F GH+ V V++ P++ + S
Sbjct: 155 FSP-DGKWLASAADDHTVKLWD---LTA---GKMMSEFPGHTGPVNVVEFHPNEY-LLAS 206
Query: 307 SAEDGILNIWDHEK 320
+ D + WD EK
Sbjct: 207 GSSDRTIRFWDLEK 220
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 50/184 (27%), Positives = 89/184 (48%)
Query: 139 WSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL---GHED 195
W +Q+ + A + S G A+ + + +GG+ D + SI + GH
Sbjct: 11 WKLQE----IVAHASNVSSLVLGKASGRLLA-TGGD-DCRVNLWSINKPNCIMSLTGHTS 64
Query: 196 TVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNL 254
VE V+ ++ +E G S I +WD + ++ H A+I +D++P+
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPYG-EF 119
Query: 255 ILTGSADNSIHMFD-RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
+ +GS D +I ++D RRK G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRRK----GC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTV 171
Query: 314 NIWD 317
+WD
Sbjct: 172 KLWD 175
Score = 119 (46.9 bits), Expect = 0.00066, P = 0.00066
Identities = 50/194 (25%), Positives = 89/194 (45%)
Query: 133 DQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKN-----ASKSGGNGDKPLESPSIGAR 187
D V LWSI + + + + G S N+ S+SG LE+ I R
Sbjct: 42 DCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI-LR 99
Query: 188 GKYLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVD 246
+GH+ + + F P EF + G D+ + LWD R V + H+ + C+
Sbjct: 100 -TLMGHKANICSLDFHPYG--EFVASGSQDTNIKLWDIRRKG--CVFRYRGHSQAVRCLR 154
Query: 247 WNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
++P D + + + D+++ ++D LT+ G + +F GH+ V V++ P++ + S
Sbjct: 155 FSP-DGKWLASAADDHTVKLWD---LTA---GKMMSEFPGHTGPVNVVEFHPNEY-LLAS 206
Query: 307 SAEDGILNIWDHEK 320
+ D + WD EK
Sbjct: 207 GSSDRTIRFWDLEK 220
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 50/184 (27%), Positives = 89/184 (48%)
Query: 139 WSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL---GHED 195
W +Q+ + A + S G A+ + + +GG+ D + SI + GH
Sbjct: 11 WKLQE----IVAHASNVSSLVLGKASGRLLA-TGGD-DCRVNLWSINKPNCIMSLTGHTS 64
Query: 196 TVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNL 254
VE V+ ++ +E G S I +WD + ++ H A+I +D++P+
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPYG-EF 119
Query: 255 ILTGSADNSIHMFD-RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
+ +GS D +I ++D RRK G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRRK----GC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTV 171
Query: 314 NIWD 317
+WD
Sbjct: 172 KLWD 175
Score = 119 (46.9 bits), Expect = 0.00066, P = 0.00066
Identities = 50/194 (25%), Positives = 89/194 (45%)
Query: 133 DQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKN-----ASKSGGNGDKPLESPSIGAR 187
D V LWSI + + + + G S N+ S+SG LE+ I R
Sbjct: 42 DCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI-LR 99
Query: 188 GKYLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVD 246
+GH+ + + F P EF + G D+ + LWD R V + H+ + C+
Sbjct: 100 -TLMGHKANICSLDFHPYG--EFVASGSQDTNIKLWDIRRKG--CVFRYRGHSQAVRCLR 154
Query: 247 WNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
++P D + + + D+++ ++D LT+ G + +F GH+ V V++ P++ + S
Sbjct: 155 FSP-DGKWLASAADDHTVKLWD---LTA---GKMMSEFPGHTGPVNVVEFHPNEY-LLAS 206
Query: 307 SAEDGILNIWDHEK 320
+ D + WD EK
Sbjct: 207 GSSDRTIRFWDLEK 220
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 50/184 (27%), Positives = 89/184 (48%)
Query: 139 WSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL---GHED 195
W +Q+ + A + S G A+ + + +GG+ D + SI + GH
Sbjct: 11 WKLQE----IVAHASNVSSLVLGKASGRLLA-TGGD-DCRVNLWSINKPNCIMSLTGHTS 64
Query: 196 TVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNL 254
VE V+ ++ +E G S I +WD + ++ H A+I +D++P+
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPYG-EF 119
Query: 255 ILTGSADNSIHMFD-RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
+ +GS D +I ++D RRK G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRRK----GC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTV 171
Query: 314 NIWD 317
+WD
Sbjct: 172 KLWD 175
Score = 119 (46.9 bits), Expect = 0.00066, P = 0.00066
Identities = 50/194 (25%), Positives = 89/194 (45%)
Query: 133 DQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKN-----ASKSGGNGDKPLESPSIGAR 187
D V LWSI + + + + G S N+ S+SG LE+ I R
Sbjct: 42 DCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI-LR 99
Query: 188 GKYLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVD 246
+GH+ + + F P EF + G D+ + LWD R V + H+ + C+
Sbjct: 100 -TLMGHKANICSLDFHPYG--EFVASGSQDTNIKLWDIRRKG--CVFRYRGHSQAVRCLR 154
Query: 247 WNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
++P D + + + D+++ ++D LT+ G + +F GH+ V V++ P++ + S
Sbjct: 155 FSP-DGKWLASAADDHTVKLWD---LTA---GKMMSEFPGHTGPVNVVEFHPNEY-LLAS 206
Query: 307 SAEDGILNIWDHEK 320
+ D + WD EK
Sbjct: 207 GSSDRTIRFWDLEK 220
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 50/184 (27%), Positives = 89/184 (48%)
Query: 139 WSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL---GHED 195
W +Q+ + A + S G A+ + + +GG+ D + SI + GH
Sbjct: 11 WKLQE----IVAHASNVSSLVLGKASGRLLA-TGGD-DCRVNLWSINKPNCIMSLTGHTS 64
Query: 196 TVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNL 254
VE V+ ++ +E G S I +WD + ++ H A+I +D++P+
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPYG-EF 119
Query: 255 ILTGSADNSIHMFD-RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
+ +GS D +I ++D RRK G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRRK----GC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTV 171
Query: 314 NIWD 317
+WD
Sbjct: 172 KLWD 175
Score = 119 (46.9 bits), Expect = 0.00067, P = 0.00067
Identities = 50/194 (25%), Positives = 89/194 (45%)
Query: 133 DQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKN-----ASKSGGNGDKPLESPSIGAR 187
D V LWSI + + + + G S N+ S+SG LE+ I R
Sbjct: 42 DCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI-LR 99
Query: 188 GKYLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVD 246
+GH+ + + F P EF + G D+ + LWD R V + H+ + C+
Sbjct: 100 -TLMGHKANICSLDFHPYG--EFVASGSQDTNIKLWDIRRKG--CVFRYRGHSQAVRCLR 154
Query: 247 WNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
++P D + + + D+++ ++D LT+ G + +F GH+ V V++ P++ + S
Sbjct: 155 FSP-DGKWLASAADDHTVKLWD---LTA---GKMMSEFPGHTGPVNVVEFHPNEY-LLAS 206
Query: 307 SAEDGILNIWDHEK 320
+ D + WD EK
Sbjct: 207 GSSDRTIRFWDLEK 220
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 50/177 (28%), Positives = 82/177 (46%)
Query: 164 NSKNASKSGGNGDKPLESPSIG--ARG-KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLI 220
N N + G+ DK L ++ AR +++GH D + V F PS + S D +
Sbjct: 27 NPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSL-VASSSRDQTVR 85
Query: 221 LWDARSGSTPAVKVE----KAHNADIHCVDWNPHDVNLILTGSADNSIHMF--DRRKLTS 274
LW TP++K E KAH A + V ++ D ++T S D S+ ++ +R+K
Sbjct: 86 LW------TPSIKGESTVFKAHTASVRSVHFS-RDGQRLVTASDDKSVKVWGVERKKF-- 136
Query: 275 DGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD---HEKIGEKQDYG 328
++ H+ V C ++SPD + S +D + +WD H+ I DYG
Sbjct: 137 ------LYSLNRHTNWVRCARFSPD-GRLIASCGDDRTVRLWDTSSHQCINIFTDYG 186
Score = 127 (49.8 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 33/112 (29%), Positives = 56/112 (50%)
Query: 205 SSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSI 264
SS S G D+ + +WD R+ ++ K HNA ++C ++P N +++GS+D++I
Sbjct: 196 SSGTCIASSGADNTIKIWDIRTNKL--IQHYKVHNAGVNCFSFHPSG-NYLISGSSDSTI 252
Query: 265 HMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
+ D + G I+ GH VL V +S D +F S D + +W
Sbjct: 253 KILDLLE------GRLIYTLHGHKGPVLTVTFSRD-GDLFASGGADSQVLMW 297
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
Y GH V D+ P S F S D LW T +++ H A + CV ++P
Sbjct: 377 YQGHAYPVWDLDISPHSLF-FASASYDHTARLWSF--DRTYPLRIYAGHLAGVDCVKFHP 433
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ N + TGS D ++ ++ ++ G+ + F GH V C+ +SP+ + S+ E
Sbjct: 434 NS-NYLATGSTDKTVRLWSAQQ------GNSVRLFTGHCGPVRCLAFSPNGQYLV-SAGE 485
Query: 310 DGILNIWD 317
D +L +WD
Sbjct: 486 DQLLKLWD 493
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 75/290 (25%), Positives = 123/290 (42%)
Query: 30 LANHNL-VWPSLSCRWGPQLEQATYKNRQRLYLSEQFNEEARSPFVKKFKTIIHPGEVNR 88
L N ++ +W SL+ ++ + Q + + + + +EE R+ +K + H G V
Sbjct: 287 LNNSSIKLW-SLTSKFKSKPHQIDVSHIHLINDTLEVDEEDRTATERKV-LLGHCGPVYS 344
Query: 89 IRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAA------DSHP--------DLDQ 134
R LP +S +++ D+ + WD+E+ N G A D P D
Sbjct: 345 TRFLPDSSALLSCSEDT-SIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASASYDH 403
Query: 135 SVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLE--SPSIGARGK-YL 191
+ LWS D L G + + + G+ DK + S G + +
Sbjct: 404 TARLWSF-DRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT 462
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH V + F P+ Q S G+D L LWD SG+ K H DI V ++ D
Sbjct: 463 GHCGPVRCLAFSPNG-QYLVSAGEDQLLKLWDLASGTL--YKDLHGHTDDITSVTFSL-D 518
Query: 252 VNLILTGSADNSIHMFD-RRKLTS---DGVGSPI-HKFEGHSAAVLCVQW 296
++I + S DNS+ ++D + K S DG S + + G + VL VQ+
Sbjct: 519 SSVIASASMDNSVRIWDIKSKHNSTPADGSSSELLGVYTGQMSTVLNVQF 568
Score = 128 (50.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 51/179 (28%), Positives = 88/179 (49%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
Y GH V+ V+F P+S + + G D + LW A+ G++ V++ H + C+ ++
Sbjct: 419 YAGHLAGVDCVKFHPNS--NYLATGSTDKTVRLWSAQQGNS--VRLFTGHCGPVRCLAFS 474
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P+ L+ G D + ++D L S + +H GH+ + V +S D SSV S++
Sbjct: 475 PNGQYLVSAGE-DQLLKLWD---LASGTLYKDLH---GHTDDITSVTFSLD-SSVIASAS 526
Query: 309 EDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIET-KLLTSIGMHLIHG-RLLV 365
D + IWD I K + P SS++L + T ++ T + + + G RLLV
Sbjct: 527 MDNSVRIWD---IKSKHN----STPA--DGSSSELLGVYTGQMSTVLNVQFMAGSRLLV 576
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 115 (45.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 35/143 (24%), Positives = 62/143 (43%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILW------DARSGSTPAVK----VEKAHNAD 241
GH TV + F + ++ + DD + +W + S S P K + H
Sbjct: 192 GHTSTVWSLAF-DQTGEQLATCSDDKTVRIWRQLGTGEQGSKSDPNWKCVCTLTGYHTRT 250
Query: 242 IHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPI----HKFEGHSAAVLCVQWS 297
++ V+WN H I T D+++ +F+ SD + H H+ V CV W
Sbjct: 251 VYDVNWN-HLTGAIATACGDDAVRIFEEDP-GSDPLQPTFSLTAHMPRAHTQDVNCVTWH 308
Query: 298 PDKSSVFGSSAEDGILNIWDHEK 320
P + ++ S ++DG + W ++K
Sbjct: 309 PKEPNLLASCSDDGEMAFWRYQK 331
Score = 65 (27.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSI 141
H EV + P S ++AT + V +W+V+ + V +SH D V+W
Sbjct: 104 HENEVKSVAWAPSGS-LLATCSRDKSVWVWEVDEEEEYECV-SVLNSHTQ-DVKHVVWHP 160
Query: 142 QDHVSALAAEPGSAK 156
+ A A+ S K
Sbjct: 161 NQELLASASYDDSVK 175
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 65/255 (25%), Positives = 103/255 (40%)
Query: 82 HPGEVNRIRELPQNSK-IVATHTDSPDVLIWDVEAQPNRHAVLGAAD--SHPDLDQSVVL 138
H G V+ +R N +V T + V +WD H + A +H L V
Sbjct: 285 HKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSHAHWVNHLALSTDFVC 344
Query: 139 WS-IQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSI------------G 185
+ DH + A + + TA + A++ GG + L S S G
Sbjct: 345 RTGFFDHTKTVPAT--AEEKTAKAKERYEKAARVGGKIVERLVSASDDFTMYLFDPLNDG 402
Query: 186 AR--GKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIH 243
+ + +GH+ V V F P + S G D+ LW+AR G + + H A ++
Sbjct: 403 TKPIARMIGHQKQVNHVTFSPDGSM-IASAGWDNATKLWNARDGKF--INTLRGHVAPVY 459
Query: 244 CVDWNPHDVNLILTGSADNSIHMFDRR--KLTSDGVGSPIHKFEGHSAAVLCVQWSPDKS 301
++ D L++T S D ++ +++ R KL +D GH V V WSPD
Sbjct: 460 QCSFSA-DSRLLVTASKDTTLKVWNVRTGKLATD--------LPGHEDEVYGVDWSPDGQ 510
Query: 302 SVFGSSAEDGILNIW 316
V GS D + +W
Sbjct: 511 RV-GSGGRDKAVRLW 524
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 33/94 (35%), Positives = 47/94 (50%)
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
H I C ++P + TGS DN+ ++D G+P H +GH+ VL V WS
Sbjct: 151 HGEPILCAQFSPASSARLATGSGDNTARIWDAE------TGTPKHTLKGHAGWVLGVSWS 204
Query: 298 PDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELK 331
PD + + + + D + IWD E G KQ ELK
Sbjct: 205 PDGTRL-ATCSMDKTVRIWDPET-G-KQVGSELK 235
Score = 120 (47.3 bits), Expect = 0.00038, P = 0.00038
Identities = 37/130 (28%), Positives = 61/130 (46%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + + QF P+S+ + D+ +WDA +G TP + K H + V W+P D
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETG-TPKHTL-KGHAGWVLGVSWSP-D 206
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSP-----DKSSVFGS 306
+ T S D ++ ++D T VGS + +GH+ V + W P D + S
Sbjct: 207 GTRLATCSMDKTVRIWDPE--TGKQVGSEL---KGHAKWVQGIAWEPLHLWRDGTPRLVS 261
Query: 307 SAEDGILNIW 316
+++D IW
Sbjct: 262 ASKDFTARIW 271
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 55/201 (27%), Positives = 87/201 (43%)
Query: 153 GSAKSTASGGANSKNASKSGGNGDKPLE--SPSIGARGKYL-GHEDTVEDVQFCPSSAQE 209
G+ T G +NS A + G+ D+ + P+ G+ + L GH V V F P +
Sbjct: 693 GAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDG-RL 751
Query: 210 FCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDR 269
S D + LWD +GS + + H+ + V ++P D L+ +GS D ++ ++D
Sbjct: 752 LASGSFDKTVRLWDPATGSLQ--QTLRGHSNWVRSVAFSP-DGRLLASGSFDKTVRLWD- 807
Query: 270 RKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGEKQDYGE 329
GS GHS V V +SPD + S + D + +WD G Q
Sbjct: 808 -----PATGSLQQTLRGHSDTVRSVAFSPD-GRLLASGSFDKTVRLWD-PATGTLQQTLI 860
Query: 330 LKYPIIHPAYSSDMLDIETKL 350
+K + +S D I T L
Sbjct: 861 IKGTVTELQFSQDGSYISTNL 881
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 62/267 (23%), Positives = 111/267 (41%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPD---LDQSV 136
+ H VN ++ ++S+++ T + V +W + +PN L S D D S
Sbjct: 13 VAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLYGHSSGIDSVTFDASE 71
Query: 137 VL------------WSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSI 184
VL W +++ + G + S + + G+ D L+ I
Sbjct: 72 VLVAAGAASGTIKLWDLEE-AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 185 GARG---KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNAD 241
+G Y GH V ++F P + S G+D+ + +WD +G + K+H
Sbjct: 131 RKKGCIHTYKGHTRGVNVLRFTPDG-RWVVSGGEDNIVKVWDLTAGKL--LTEFKSHEGQ 187
Query: 242 IHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKS 301
I +D++PH+ L+ TGSAD ++ +D G G P +A V C+ ++PD
Sbjct: 188 IQSLDFHPHEF-LLATGSADRTVKFWDLETFELIGSGGP------ETAGVRCLSFNPDGK 240
Query: 302 SVFGSSAEDGILNIWDHEKIGEKQDYG 328
+V E + W+ + + D G
Sbjct: 241 TVLCGLQESLKIFSWEPIRCHDGVDVG 267
>UNIPROTKB|F1NXA8 [details] [associations]
symbol:DCAF10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 GeneTree:ENSGT00390000012666
OMA:DDEECTC EMBL:AADN02071587 EMBL:AADN02071588 IPI:IPI00574318
Ensembl:ENSGALT00000008658 Uniprot:F1NXA8
Length = 385
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 43/176 (24%), Positives = 87/176 (49%)
Query: 178 PLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKA 237
P+ S I + HED V +++F + CS DD+ + LWD R +T +
Sbjct: 23 PISSKHIKTLSE--AHEDCVNNIRFLDNRLFATCS--DDTTIALWDLRKLNTKVCTLH-G 77
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
H + + ++++ + L++T D ++ ++D + T DG P KF H+ ++ ++ +
Sbjct: 78 HTSWVKNIEYDTN-TRLLVTSGFDGNVIIWDTNRCTEDGC--PHKKFF-HTRFLMRMRLT 133
Query: 298 PDKSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTS 353
PD S + S++ +L + D + + + + G YPI+ ++ DI + L+S
Sbjct: 134 PDCSKMLISTSSGYLLILHDLD-LNKTLEVGS--YPILRARRTASSSDITSSSLSS 186
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 47/193 (24%), Positives = 86/193 (44%)
Query: 130 PDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGK 189
P+L++ + + D V L+ PG+ ++ ++ N GG G+ L S
Sbjct: 227 PNLEEKLSVKGHTDRVGGLSWFPGATLPESNVSESAVNFVSGGGEGNVCLWSLDKDQPLA 286
Query: 190 YL-GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
L GH V +F PS + S D+ LWD + T +++++ H+ +++ V +N
Sbjct: 287 TLEGHSGRVCRTEFHPSG-KYIASASYDTTWRLWDVET--TAELQLQEGHSREVYTVAFN 343
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
+D +L+ +G D+ ++D R G + EGH + + W D V S
Sbjct: 344 -NDGSLLASGGLDSIGRVWDLR------TGRTVMILEGHIREIFGLDWGVDGYRVLSGSG 396
Query: 309 EDGILNIWDHEKI 321
DG + WD ++
Sbjct: 397 -DGWVKCWDLRQV 408
>CGD|CAL0004633 [details] [associations]
symbol:orf19.7343 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/220 (25%), Positives = 90/220 (40%)
Query: 139 WSIQDHVSALAAEPGSAKS-TASGGANSKNASKSGGNGDKP-----LESPSIGARGKYLG 192
W+ D+ G+ + N+ N + + N +K L SP + +
Sbjct: 163 WNNNDNQLVSGGNEGTINIWNVNENNNNNNNNNNNNNNEKDQNGLLLSSPIVSIKQ---A 219
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDAR--SGSTPAVK--VEK-AHNADIHCVDW 247
H D + F P + S D LWD SG ++ VE+ H+ I +
Sbjct: 220 HNDRITKTLFHPIN-NLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIFTGEI 278
Query: 248 NPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
+P D L ++G D +H++D R G I + H A V C+ WSP+ F +
Sbjct: 279 HP-DGGLFMSGGLDGIVHIWDLRS------GRSIVTLQKHMAGVYCLDWSPNGYQ-FVTG 330
Query: 308 AEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ D L IWD K+ EL Y I PA++ + D++
Sbjct: 331 SGDCSLKIWDLRKLENNNSNNEL-YSI--PAHTKLITDVK 367
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 31/105 (29%), Positives = 56/105 (53%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + + P F S G D + +WD RSG + V ++K H A ++C+DW+P+
Sbjct: 268 GHSKPIFTGEIHPDGGL-FMSGGLDGIVHIWDLRSGRS-IVTLQK-HMAGVYCLDWSPNG 324
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQW 296
+ TGS D S+ ++D RKL ++ + ++ H+ + V++
Sbjct: 325 YQFV-TGSGDCSLKIWDLRKLENNNSNNELYSIPAHTKLITDVKF 368
Score = 117 (46.2 bits), Expect = 0.00066, P = 0.00066
Identities = 52/188 (27%), Positives = 88/188 (46%)
Query: 133 DQSVVLWSIQDHVSALAAEPGSA-KSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL 191
D+ + S ++ L ++ S K T SG N K + S N D L S G G +
Sbjct: 123 DKYIACGSWDGSINLLNSQDLSIFKKTPSGFHNEKISGLSWNNNDNQLVSG--GNEGT-I 179
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
+ E+ ++ + D + L+L S+P V +++AHN I ++P +
Sbjct: 180 NIWNVNENNNNNNNNNNNNNNEKDQNGLLL------SSPIVSIKQAHNDRITKTLFHPIN 233
Query: 252 VNLILTGSADNSIHMFDRRKLTS--DGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
NLI++ S D + ++D KL+ D + + + EGHS + + PD +F S
Sbjct: 234 -NLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQ-EGHSKPIFTGEIHPD-GGLFMSGGL 290
Query: 310 DGILNIWD 317
DGI++IWD
Sbjct: 291 DGIVHIWD 298
>UNIPROTKB|Q5A3W6 [details] [associations]
symbol:PRP4 "Potential spliceosomal U4/U6 snRNP protein
Prp4p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/220 (25%), Positives = 90/220 (40%)
Query: 139 WSIQDHVSALAAEPGSAKS-TASGGANSKNASKSGGNGDKP-----LESPSIGARGKYLG 192
W+ D+ G+ + N+ N + + N +K L SP + +
Sbjct: 163 WNNNDNQLVSGGNEGTINIWNVNENNNNNNNNNNNNNNEKDQNGLLLSSPIVSIKQ---A 219
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDAR--SGSTPAVK--VEK-AHNADIHCVDW 247
H D + F P + S D LWD SG ++ VE+ H+ I +
Sbjct: 220 HNDRITKTLFHPIN-NLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIFTGEI 278
Query: 248 NPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
+P D L ++G D +H++D R G I + H A V C+ WSP+ F +
Sbjct: 279 HP-DGGLFMSGGLDGIVHIWDLRS------GRSIVTLQKHMAGVYCLDWSPNGYQ-FVTG 330
Query: 308 AEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIE 347
+ D L IWD K+ EL Y I PA++ + D++
Sbjct: 331 SGDCSLKIWDLRKLENNNSNNEL-YSI--PAHTKLITDVK 367
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 31/105 (29%), Positives = 56/105 (53%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + + P F S G D + +WD RSG + V ++K H A ++C+DW+P+
Sbjct: 268 GHSKPIFTGEIHPDGGL-FMSGGLDGIVHIWDLRSGRS-IVTLQK-HMAGVYCLDWSPNG 324
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQW 296
+ TGS D S+ ++D RKL ++ + ++ H+ + V++
Sbjct: 325 YQFV-TGSGDCSLKIWDLRKLENNNSNNELYSIPAHTKLITDVKF 368
Score = 117 (46.2 bits), Expect = 0.00066, P = 0.00066
Identities = 52/188 (27%), Positives = 88/188 (46%)
Query: 133 DQSVVLWSIQDHVSALAAEPGSA-KSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL 191
D+ + S ++ L ++ S K T SG N K + S N D L S G G +
Sbjct: 123 DKYIACGSWDGSINLLNSQDLSIFKKTPSGFHNEKISGLSWNNNDNQLVSG--GNEGT-I 179
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
+ E+ ++ + D + L+L S+P V +++AHN I ++P +
Sbjct: 180 NIWNVNENNNNNNNNNNNNNNEKDQNGLLL------SSPIVSIKQAHNDRITKTLFHPIN 233
Query: 252 VNLILTGSADNSIHMFDRRKLTS--DGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
NLI++ S D + ++D KL+ D + + + EGHS + + PD +F S
Sbjct: 234 -NLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQ-EGHSKPIFTGEIHPD-GGLFMSGGL 290
Query: 310 DGILNIWD 317
DGI++IWD
Sbjct: 291 DGIVHIWD 298
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 37/128 (28%), Positives = 62/128 (48%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
Y GH V DV F P F + D LW P ++V H +D+ CV ++P
Sbjct: 417 YKGHTGPVWDVAFGPFG-HYFATASHDQTAQLWSC-DHIYP-LRVFAGHLSDVDCVTFHP 473
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ +LTGS+D + ++D + G + F GH+ V V +PD ++ + +E
Sbjct: 474 NSA-YVLTGSSDKTCRLWDVHR------GHSVRVFNGHTQPVTAVAIAPDGHTMASADSE 526
Query: 310 DGILNIWD 317
G++++WD
Sbjct: 527 -GLIHLWD 533
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 140 (54.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 41/153 (26%), Positives = 71/153 (46%)
Query: 174 NGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVK 233
NG P+ H + V D+ F P+ ++ F + GDDS + +W+ +G +
Sbjct: 198 NGTVKYWQPNFNNVNNISAHANGVRDIAFSPNDSK-FLTCGDDSAIKIWNFNNGKEE--R 254
Query: 234 VEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKL----TSDGVGSPIHK--FEGH 287
H+ ++ DW+P+ + LI++GS DN + ++D R T G ++K F+ +
Sbjct: 255 TLSGHHWEVKSADWHPN-LGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPN 313
Query: 288 SAAVLCVQWSPDKSS-VFGSSAEDGILNIWDHE 319
A L S D+S +F +L I D E
Sbjct: 314 GTARLLASVSRDRSCRIFDLRTMKDMLVIRDSE 346
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 140 (54.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 41/153 (26%), Positives = 71/153 (46%)
Query: 174 NGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVK 233
NG P+ H + V D+ F P+ ++ F + GDDS + +W+ +G +
Sbjct: 198 NGTVKYWQPNFNNVNNISAHANGVRDIAFSPNDSK-FLTCGDDSAIKIWNFNNGKEE--R 254
Query: 234 VEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKL----TSDGVGSPIHK--FEGH 287
H+ ++ DW+P+ + LI++GS DN + ++D R T G ++K F+ +
Sbjct: 255 TLSGHHWEVKSADWHPN-LGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPN 313
Query: 288 SAAVLCVQWSPDKSS-VFGSSAEDGILNIWDHE 319
A L S D+S +F +L I D E
Sbjct: 314 GTARLLASVSRDRSCRIFDLRTMKDMLVIRDSE 346
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 41/168 (24%), Positives = 79/168 (47%)
Query: 151 EPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL-GHEDTVEDVQFCPSSAQE 209
EP + N +N + S NG + + + G L GH + D+ + P ++
Sbjct: 24 EPSITFTAIKFSPNGQNFACSSSNGKIYIYNTTTGKLITTLSGHTKGISDIVYSPINSNI 83
Query: 210 FCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDR 269
S DD + LW+ +K+ + H I + + N++++GS+D +I ++D
Sbjct: 84 LASCSDDLTIRLWNITQQR--CIKLLRKHTYHITTLKFTQKG-NILISGSSDETITIWD- 139
Query: 270 RKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
+TS+G G + HS V + +PD S+ S++ DG++ ++D
Sbjct: 140 --ITSNG-GKILTTLAAHSDPVSSIALTPD-DSIIVSASYDGLMRLFD 183
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 136 (52.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 47/157 (29%), Positives = 73/157 (46%)
Query: 171 SGGNGDKPLESPSIGARGK--Y-LGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARS 226
+ G+GDK + I A GK Y L ED V V P + + G D + +WD +
Sbjct: 374 ASGSGDKTVRLWDI-AEGKLVYTLSIEDGVTTVAMSPDGL--YVAAGSLDKTVRVWDTTT 430
Query: 227 GS-TPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFD----RRKLTSDGVGSPI 281
G ++ H ++ V + P+ L+ +GS D +I +++ R++ S G G
Sbjct: 431 GYLVERLENPDGHKDSVYSVAFAPNGKELV-SGSLDKTIKLWELNLPRQQYNSAGKGGKC 489
Query: 282 HK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
H+ FEGH VL V +PD V S + G+ WD
Sbjct: 490 HRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGV-QFWD 525
Score = 47 (21.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 95 NSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLD 133
+ K +AT + + +WD+ + +H G LD
Sbjct: 327 DGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLD 365
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 9/47 (19%), Positives = 22/47 (46%)
Query: 56 RQRLYLSEQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATH 102
RQ++Y EQ + + + + + + H E ++ + + + A H
Sbjct: 78 RQKVYQLEQAQLKMKQDYEAEIRMLRHELESRGVQPVASHVAVPAQH 124
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 143 (55.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + + F P S+ S DS +WD +G TP + K H + + V ++P+
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTG-TP-LHTLKGHTSWVLAVSYSPNG 203
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFG-----S 306
+I TGS DN++ ++D +K +G+P+ +GH + + W P G S
Sbjct: 204 A-MIATGSMDNTVRIWDAKK--GQALGAPL---KGHVKWITSLAWEPYHLQQSGHPRLAS 257
Query: 307 SAEDGILNIWD 317
+++D + IWD
Sbjct: 258 ASKDSTVRIWD 268
Score = 127 (49.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 189 KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
+ LGH+ V V F P A S G D+ + LW+ R G + + H ++ ++
Sbjct: 400 RLLGHQKEVNHVTFSPDMAY-IASAGFDNHVKLWNGRDGKF--ITTLRGHVGAVYQCCFS 456
Query: 249 PHDVNLILTGSADNSIHMFDRR--KLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
D L+++ S D ++ +++ R KL+ D GH V V WSPD V GS
Sbjct: 457 A-DSRLLVSSSKDTTLKVWNVRTGKLSED--------LPGHKDEVFAVDWSPDGQKV-GS 506
Query: 307 SAEDGILNIW 316
+D + IW
Sbjct: 507 GGKDKAIRIW 516
Score = 38 (18.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 51 ATYKNRQRLYLSEQFNEE-ARSPFVKKFKT 79
AT KN + L + Q NEE R P+ F++
Sbjct: 60 ATVKNLETLLNTLQGNEEDERVPYRFTFQS 89
>MGI|MGI:2685187 [details] [associations]
symbol:Sec31b "Sec31 homolog B (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0044432 "endoplasmic reticulum part" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2685187 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0015031 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 GeneTree:ENSGT00390000003175 CTD:25956
OMA:RLECLYE OrthoDB:EOG470TGM EMBL:AK158017 EMBL:AC151478
EMBL:BC042701 IPI:IPI00667569 IPI:IPI00854010 RefSeq:NP_001028515.1
UniGene:Mm.329873 ProteinModelPortal:Q3TZ89 SMR:Q3TZ89
PhosphoSite:Q3TZ89 PaxDb:Q3TZ89 PRIDE:Q3TZ89
Ensembl:ENSMUST00000063632 Ensembl:ENSMUST00000111985 GeneID:240667
KEGG:mmu:240667 UCSC:uc008hpu.1 UCSC:uc012bmg.1 InParanoid:Q3TZ89
NextBio:384667 Bgee:Q3TZ89 CleanEx:MM_SEC31B Genevestigator:Q3TZ89
Uniprot:Q3TZ89
Length = 1158
Score = 125 (49.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 34/106 (32%), Positives = 56/106 (52%)
Query: 211 CSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDR 269
CS D +I LWD R S+P +KV ++H+ I + WN D L+L+ + D+ I ++
Sbjct: 232 CSEDDQLPVIQLWDLRFASSP-LKVLESHSRGILSMSWNQADAELLLSTAKDSQIFCWN- 289
Query: 270 RKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNI 315
L+S V ++K S+ VQW P VF + + DG +++
Sbjct: 290 --LSSSEV---VYKLPTQSSWCFDVQWCPQSPPVFSAVSFDGWISL 330
Score = 107 (42.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 220 ILWDARSGSTPAVKVEKAHNADIHC--VDWNPHDVNLILTGSADNSIHMFDRRKLTSDGV 277
++WD R P +KV +H++ ++C + WNP ++ S D+ + + L
Sbjct: 194 VVWDLRKNE-PIIKVS-SHSSRMNCSGLAWNPDIATQLVLCSEDDQLPVIQLWDLRF--A 249
Query: 278 GSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
SP+ E HS +L + W+ + + S+A+D + W+
Sbjct: 250 SSPLKVLESHSRGILSMSWNQADAELLLSTAKDSQIFCWN 289
Score = 66 (28.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 18/75 (24%), Positives = 31/75 (41%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSI 141
H G V + P ++A+ ++ IWD+ + G +P D + W++
Sbjct: 120 HTGAVRALDFNPFQGNLLASGASDSEIFIWDLN-HLSVPMTPGPKSQNPPEDIKALSWNL 178
Query: 142 Q-DHVSALAAEPGSA 155
Q H+ A A G A
Sbjct: 179 QVQHILASAHPSGKA 193
>SGD|S000002535 [details] [associations]
symbol:MTC5 "Subunit of the SEA (Seh1-associated) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000329 "fungal-type
vacuole membrane" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005774 "vacuolar membrane" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IDA] [GO:0097042 "extrinsic to
fungal-type vacuolar membrane" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
SGD:S000002535 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319 EMBL:BK006938
EMBL:Z48179 GO:GO:0097042 GO:GO:0035859
GeneTree:ENSGT00650000093352 OMA:INPSGRD OrthoDB:EOG43BQX2
PIR:S51855 RefSeq:NP_010413.3 RefSeq:NP_010417.3
ProteinModelPortal:Q03897 SMR:Q03897 DIP:DIP-1825N IntAct:Q03897
MINT:MINT-402415 STRING:Q03897 PaxDb:Q03897 PeptideAtlas:Q03897
EnsemblFungi:YDR128W GeneID:851706 GeneID:851710 KEGG:sce:YDR128W
KEGG:sce:YDR132C CYGD:YDR128w NextBio:969389 Genevestigator:Q03897
GermOnline:YDR128W Uniprot:Q03897
Length = 1148
Score = 143 (55.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 38/129 (29%), Positives = 58/129 (44%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + D+ F P + D+ + WD RS P +A V WN D
Sbjct: 112 GHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQ-VKWNYKD 170
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
N +L S N I ++D RK G +P+ +GH ++V + ++ K S SS+ DG
Sbjct: 171 PN-VLASSHGNDIFVWDLRK----G-STPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDG 224
Query: 312 ILNIWDHEK 320
+ WD+ K
Sbjct: 225 TVKFWDYSK 233
>DICTYBASE|DDB_G0288453 [details] [associations]
symbol:DDB_G0288453 "E3 ubiquitin-protein ligase
RFWD2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
dictyBase:DDB_G0288453 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 EMBL:AAFI02000111 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 RefSeq:XP_636746.1
ProteinModelPortal:Q54IY4 EnsemblProtists:DDB0219336 GeneID:8626624
KEGG:ddi:DDB_G0288453 InParanoid:Q54IY4 OMA:DINVVER Uniprot:Q54IY4
Length = 970
Score = 141 (54.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 40/125 (32%), Positives = 60/125 (48%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
HE V V F + + S DD+ + LW + +E A+I CV +NP
Sbjct: 757 HEKRVWSVDFSRTDPTQLASGSDDTRVKLWSTTT-ERAITTIES--KANICCVKFNPCSS 813
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGI 312
NLI GSAD+ IH +D R+ P+ F+GH AV V++ +K + +S D
Sbjct: 814 NLIAFGSADHHIHYYDLRQYKD-----PLLIFKGHRKAVSYVKFM-NKDEIISAST-DST 866
Query: 313 LNIWD 317
L +W+
Sbjct: 867 LKLWN 871
Score = 47 (21.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 12/57 (21%), Positives = 25/57 (43%)
Query: 125 AADSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLES 181
+A + D D ++ + + + P S S++S NS + S + N + L +
Sbjct: 566 SAYNESDYDSPTIISETNHNNNNILKSPNSVNSSSSSIINSNSNSNNNNNTNSNLNN 622
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 143 (55.4 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 60/239 (25%), Positives = 102/239 (42%)
Query: 95 NSKIVATHTDSPDVLIWDV---EAQPNR-------HAVLGAAD----SHPDLDQSVVLW- 139
+ K + + +D + +WD+ E Q + HAV + D + LD ++ LW
Sbjct: 1013 DGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWD 1072
Query: 140 SIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYL-GHEDTVE 198
S + + + + K + + +G L +P G + L G D V+
Sbjct: 1073 SATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVD 1132
Query: 199 DVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTG 258
V F P Q S DS + LWD+ +G ++ + H+ I V ++P D L+ +G
Sbjct: 1133 SVAFSPDGKQ-LASGYYDSTIKLWDSATGEL--LQTLEGHSDRIQSVVFSP-DGKLLASG 1188
Query: 259 SADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
S D + ++D G + FEGHS V V +SPD + SS+ + +WD
Sbjct: 1189 SYDQTAKLWD------PATGELLQIFEGHSKWVESVAFSPD-GKLLASSSYGETIKLWD 1240
Score = 128 (50.1 bits), Expect = 0.00017, P = 0.00017
Identities = 58/248 (23%), Positives = 105/248 (42%)
Query: 110 IWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQ--DHVSALAAEPGSAKSTASGGANSKN 167
IW V P+ + A+D D ++ +W + + L + S +S A
Sbjct: 837 IWSVAFAPDGKELASASD-----DSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLL 891
Query: 168 ASKSGGNGDKPLESPSIGARGKYL-GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS 226
AS S + K + +P+ G + L G V+ V F P ++ S + + + LW+ +
Sbjct: 892 ASSSLDSTIK-VWNPATGELQQSLEGRSGWVKSVAFSPDG-KKLASGSEKNTVKLWNPAT 949
Query: 227 GSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEG 286
G ++ + H+ + V ++P D + + S+D +I KL + G F+G
Sbjct: 950 GEL--LQTLEGHSQSVRSVAFSP-DGKQLASSSSDTTI------KLWNSTTGELQQTFKG 1000
Query: 287 HSAAVLCVQWSPD-KSSVFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLD 345
H + V +SPD K V GS +D + +WD +Q + + A+S D
Sbjct: 1001 HDLWIRAVAFSPDGKHLVSGS--DDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQ 1058
Query: 346 IETKLLTS 353
+ + L S
Sbjct: 1059 LASSSLDS 1066
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 137 (53.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 37/114 (32%), Positives = 54/114 (47%)
Query: 203 CPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADN 262
CP + S DD+ L LW R+ V+ H ++ V ++P DV LI + S D
Sbjct: 341 CPDEVESLVSCSDDNTLYLW--RNNQNKCVERMTGHQNVVNDVKYSP-DVKLIASASFDK 397
Query: 263 SIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
S+ ++ SDG + F GH AV V WS D S + S ++D L +W
Sbjct: 398 SVRLWR----ASDG--QYMATFRGHVQAVYTVAWSAD-SRLIVSGSKDSTLKVW 444
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH++ V DV++ P + S D + LW A G A + H ++ V W+ D
Sbjct: 373 GHQNVVNDVKYSPD-VKLIASASFDKSVRLWRASDGQYMATF--RGHVQAVYTVAWSA-D 428
Query: 252 VNLILTGSADNSIHMFD--RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
LI++GS D+++ ++ +KL + GH+ V V W+PD S V S +
Sbjct: 429 SRLIVSGSKDSTLKVWSVQTKKLAQE--------LPGHADEVFGVDWAPDGSRV-ASGGK 479
Query: 310 DGILNIW 316
D ++ +W
Sbjct: 480 DKVIKLW 486
Score = 119 (46.9 bits), Expect = 0.00043, P = 0.00043
Identities = 41/206 (19%), Positives = 85/206 (41%)
Query: 123 LGAADSHPDLD---QSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPL 179
L + D+ +D Q ++ ++ ++ PG A++ S + A + G+GD +
Sbjct: 84 LASVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTV 143
Query: 180 ESPSIGARGKYL---GHEDTVEDVQFCPSSAQ--EFCSVGDDSCLILWDARSGSTPAVKV 234
+ + GH+ V V + P + C G +I+WD +G +
Sbjct: 144 RLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGS---IIIWDPETGQQKGRPL 200
Query: 235 EKAHNADIHCVDWNPH----DVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAA 290
H I+C+ W P+ + + + S D ++D + +G + GH+ A
Sbjct: 201 S-GHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVK------LGQCLMNIAGHTNA 253
Query: 291 VLCVQWSPDKSSVFGSSAEDGILNIW 316
V V+W + + +S++D + +W
Sbjct: 254 VTAVRWGG--AGLIYTSSKDRTVKMW 277
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 114 (45.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 35/112 (31%), Positives = 54/112 (48%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
+ GH V + F P+ + S G+D L LWD SG+ K + H I + ++P
Sbjct: 18 FTGHRGPVLSLSFSPNG-KYLASAGEDQRLKLWDLASGTL--FKELRGHTDSITSLAFSP 74
Query: 250 HDVNLILTGSADNSIHMFDRRKLT----SDGV-GSPIHKFEGHSAAVLCVQW 296
D LI + S DNS+ ++D R +DG G + + G + VL VQ+
Sbjct: 75 -DSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQF 125
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 135 (52.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 55/195 (28%), Positives = 84/195 (43%)
Query: 146 SALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGH---EDTVE---- 198
SA P +A ++ASG AN K G+ K + S GKYLG + TV+
Sbjct: 58 SAQTPNPNAAGASASGSANYKLMCTLEGH-TKSISSAKFSPCGKYLGTSSADKTVKIWNM 116
Query: 199 DVQFCPS--------------SAQEFC--SVGDDSCLILWDARSGSTPAVKVEKAHNADI 242
D C S+ C S DD L +++ + K K HN +
Sbjct: 117 DHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRM--TKTLKGHNNYV 174
Query: 243 HCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSS 302
C ++NP +L+++GS D S+ ++D + G I HS V V ++ D S
Sbjct: 175 FCCNFNPQS-SLVVSGSFDESVRIWDVK------TGMCIKTLPAHSDPVSAVSFNRD-GS 226
Query: 303 VFGSSAEDGILNIWD 317
+ S + DG++ IWD
Sbjct: 227 LIASGSYDGLVRIWD 241
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 135 (52.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 55/195 (28%), Positives = 84/195 (43%)
Query: 146 SALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGH---EDTVE---- 198
SA P +A ++ASG AN K G+ K + S GKYLG + TV+
Sbjct: 58 SAQTPNPNAAGASASGSANYKLMCTLEGH-TKSISSAKFSPCGKYLGTSSADKTVKIWNM 116
Query: 199 DVQFCPS--------------SAQEFC--SVGDDSCLILWDARSGSTPAVKVEKAHNADI 242
D C S+ C S DD L +++ + K K HN +
Sbjct: 117 DHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRM--TKTLKGHNNYV 174
Query: 243 HCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSS 302
C ++NP +L+++GS D S+ ++D + G I HS V V ++ D S
Sbjct: 175 FCCNFNPQS-SLVVSGSFDESVRIWDVK------TGMCIKTLPAHSDPVSAVSFNRD-GS 226
Query: 303 VFGSSAEDGILNIWD 317
+ S + DG++ IWD
Sbjct: 227 LIASGSYDGLVRIWD 241
>ZFIN|ZDB-GENE-030131-9512 [details] [associations]
symbol:coro1a "coronin, actin binding protein, 1A"
species:7955 "Danio rerio" [GO:0030027 "lamellipodium"
evidence=IBA] [GO:0051015 "actin filament binding" evidence=IBA]
[GO:0030864 "cortical actin cytoskeleton" evidence=IBA] [GO:0051126
"negative regulation of actin nucleation" evidence=IBA] [GO:0050918
"positive chemotaxis" evidence=IBA] [GO:0030595 "leukocyte
chemotaxis" evidence=IBA] [GO:0008360 "regulation of cell shape"
evidence=IBA] [GO:0001891 "phagocytic cup" evidence=IBA]
[GO:0045335 "phagocytic vesicle" evidence=IBA] [GO:0032796 "uropod
organization" evidence=IBA] [GO:0001845 "phagolysosome assembly"
evidence=IBA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0001654 "eye development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-9512 GO:GO:0045335 GO:GO:0007420
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775
eggNOG:COG2319 GO:GO:0051015 GO:GO:0030027 GO:GO:0021952
GO:GO:0001891 GO:GO:0030864 GO:GO:0050918 GO:GO:0001654
GO:GO:0030595 GO:GO:0051126 GO:GO:0001845 CTD:11151
GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 KO:K13882 OMA:FMALICE OrthoDB:EOG4RNB8C
GO:GO:0032796 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
EMBL:BX649554 EMBL:BC055237 EMBL:BC161664 EMBL:BC171389
EMBL:BC171393 EMBL:AY330221 IPI:IPI00770939 RefSeq:NP_957408.1
UniGene:Dr.9515 SMR:Q7SX58 STRING:Q7SX58 Ensembl:ENSDART00000076830
GeneID:100002113 KEGG:dre:100002113 InParanoid:Q7SX58
NextBio:20785305 Uniprot:Q7SX58
Length = 455
Score = 119 (46.9 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 46/154 (29%), Positives = 64/154 (41%)
Query: 178 PLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKA 237
PL P + K GH V V + P++ S G D+ +ILW+ G V+++
Sbjct: 119 PLRDPVV----KLEGHSKRVGLVSWHPTAHNVLMSAGCDNVVILWNVARGEA-VVRIDTV 173
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
H I+ V WN + + ILT D + + D RK T H EG S V V S
Sbjct: 174 HTDLIYSVCWNRNG-SQILTACKDKKLRVIDPRKGTVIYEKDKPH--EG-SRPVRAVFVS 229
Query: 298 PDKSSVFG-SSAEDGILNIWDHEKIGEKQDYGEL 330
K G S + + +WD GE EL
Sbjct: 230 DGKILTTGFSRMSERQVALWDPNNFGEPLTLQEL 263
Score = 60 (26.2 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDV 113
H G V I P N I+A+ ++ V+IW++
Sbjct: 80 HTGPVLDIEFCPHNDNIIASGSEDCSVMIWEI 111
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 134 (52.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 39/142 (27%), Positives = 66/142 (46%)
Query: 181 SPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGS-TPAVKVEKAHN 239
+P + A GH V+ V +CPS + G D + LW+ V V + H+
Sbjct: 95 APEMEALVSLEGHTSEVKCVAWCPSG-HLIATCGRDKSVWLWEFDDEEDVQCVSVLQPHS 153
Query: 240 ADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPD 299
D+ V W+PH L+ T S DN I+++ R +L V + + GH + V ++SP
Sbjct: 154 QDVKSVAWHPHGEVLVST-SYDNKINVY-REELDDWTVFAQL---SGHDSTVWKAEFSPS 208
Query: 300 KSSVFGSSAEDGILNIWDHEKI 321
+ S ++D + +W E +
Sbjct: 209 -GDILASCSDDLCVKLWSWEGV 229
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 138 (53.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 39/128 (30%), Positives = 67/128 (52%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPH 250
GH +E +Q S+ +E G S I +WD + ++ H A+I +D++P+
Sbjct: 61 GHTTPIESLQI--SAKEELIVAGSQSGSIRVWDLEAAKI--LRTLLGHKANICSLDFHPY 116
Query: 251 DVNLILTGSADNSIHMFD-RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ + +GS D I ++D RRK G I K++ H+ AV C+++SPD S+A+
Sbjct: 117 G-SFVASGSLDTDIKLWDVRRK----GC---IFKYKSHTQAVRCLRFSPD-GKWLASAAD 167
Query: 310 DGILNIWD 317
D + +WD
Sbjct: 168 DHTVKLWD 175
Score = 119 (46.9 bits), Expect = 0.00066, P = 0.00066
Identities = 35/131 (26%), Positives = 65/131 (49%)
Query: 191 LGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
LGH+ + + F P + F + G D+ + LWD R + K+H + C+ ++P
Sbjct: 102 LGHKANICSLDFHPYGS--FVASGSLDTDIKLWDVRRKG--CIFKYKSHTQAVRCLRFSP 157
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
D + + + D+++ ++D LT+ G + +F GHS V V++ P + + S +
Sbjct: 158 -DGKWLASAADDHTVKLWD---LTA---GKVMFEFTGHSGPVNVVEFHPSEY-LLASGSS 209
Query: 310 DGILNIWDHEK 320
D + WD EK
Sbjct: 210 DRTIRFWDLEK 220
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 138 (53.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 39/128 (30%), Positives = 67/128 (52%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPH 250
GH +E +Q S+ +E G S I +WD + ++ H A+I +D++P+
Sbjct: 61 GHTTPIESLQI--SAKEELIVAGSQSGSIRVWDLEAAKI--LRTLLGHKANICSLDFHPY 116
Query: 251 DVNLILTGSADNSIHMFD-RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ + +GS D I ++D RRK G I K++ H+ AV C+++SPD S+A+
Sbjct: 117 G-SFVASGSLDTDIKLWDVRRK----GC---IFKYKSHTQAVRCLRFSPD-GKWLASAAD 167
Query: 310 DGILNIWD 317
D + +WD
Sbjct: 168 DHTVKLWD 175
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 138 (53.6 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 47/191 (24%), Positives = 87/191 (45%)
Query: 132 LDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARG--- 188
L S+ LW ++ L G S +S + + G+ D ++ + +G
Sbjct: 83 LSGSLRLWDLEA-AKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVF 141
Query: 189 KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
+Y GH V + F P + S DDS + LWD +G + +H + ++ V ++
Sbjct: 142 RYKGHTQAVRCLAFSPDG-KWLASASDDSTVKLWDLIAGKM--ITEFTSHTSAVNVVQFH 198
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P++ L+ +GSAD ++ ++D K +GS EG + V V ++PD S ++ S
Sbjct: 199 PNEY-LLASGSADRTVKLWDLEKFNM--IGSS----EGETGVVRSVLFNPDGSCLYSGS- 250
Query: 309 EDGILNIWDHE 319
+ L ++ E
Sbjct: 251 -ENTLRVYGWE 260
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/128 (30%), Positives = 67/128 (52%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDS-CLILWDARSGSTPAVKVEKAHNADIHCVDWNPH 250
GH V +QF +S++E G S L LWD + ++ H A I +D++P
Sbjct: 61 GHTSAVGCIQF--NSSEERVVAGSLSGSLRLWDLEAAKI--LRTLMGHKASISSLDFHPM 116
Query: 251 DVNLILTGSADNSIHMFD-RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
+ +GS D++I ++D RRK G + +++GH+ AV C+ +SPD S+++
Sbjct: 117 G-EYLASGSVDSNIKLWDVRRK----GC---VFRYKGHTQAVRCLAFSPD-GKWLASASD 167
Query: 310 DGILNIWD 317
D + +WD
Sbjct: 168 DSTVKLWD 175
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 42/152 (27%), Positives = 77/152 (50%)
Query: 191 LGHEDTVEDVQFCPSSAQEFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
+GH+ ++ + F P E+ + G DS + LWD R V K H + C+ ++P
Sbjct: 102 MGHKASISSLDFHPMG--EYLASGSVDSNIKLWDVRRKG--CVFRYKGHTQAVRCLAFSP 157
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
D + + S D+++ ++D L + G I +F H++AV VQ+ P++ + SA
Sbjct: 158 -DGKWLASASDDSTVKLWD---LIA---GKMITEFTSHTSAVNVVQFHPNEYLLASGSA- 209
Query: 310 DGILNIWDHEK---IGEKQ-DYGELKYPIIHP 337
D + +WD EK IG + + G ++ + +P
Sbjct: 210 DRTVKLWDLEKFNMIGSSEGETGVVRSVLFNP 241
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 136 (52.9 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 85 EVNRIRELPQNSKIVATH-TDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQD 143
+ + EL Q + H T +P + D++ + + G +D++VVL+ +
Sbjct: 190 KTEELAELKQTASHTGIHSTGTPGITALDIKGNLS---LTGG------IDKTVVLYDYEK 240
Query: 144 HVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSI-GARGKYL--GHEDTVEDV 200
+ G K + + N + + D + S + K + H+ V D+
Sbjct: 241 E-QVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDI 299
Query: 201 QFCPSSAQEFCSVGDDSCLILWDARSG-STPAVKVEKAHNADIHCVDWNPHDVNLILTGS 259
+S S DDS D RSG S V VE +H ++++P D + TG+
Sbjct: 300 SL-NASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHP-DGLIFGTGA 357
Query: 260 ADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHE 319
AD + ++D + T V + F GH+AAV + +S + + +EDG + +WD
Sbjct: 358 ADAVVKIWDLKNQT---VAAA---FPGHTAAVRSIAFS-ENGYYLATGSEDGEVKLWDLR 410
Query: 320 KIGEKQDYG-ELKYPI 334
K+ + + E K PI
Sbjct: 411 KLKNLKTFANEEKQPI 426
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 135 (52.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 37/126 (29%), Positives = 57/126 (45%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + + V + S A E CS D + +WD SG +K N +C+ ++P
Sbjct: 255 GHTEAISSVLW--SDADEVCSASWDHTVRVWDVESGG---LKSTLTGNKVFNCISYSPLC 309
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
L +GS D I ++D R T DG + H+ V V+WSP S + D
Sbjct: 310 KRLA-SGSTDRHIRLWDPR--TKDGSLVSL-SLTSHTGWVTSVKWSPTHDQQLISGSLDN 365
Query: 312 ILNIWD 317
++ +WD
Sbjct: 366 MVKLWD 371
Score = 115 (45.5 bits), Expect = 0.00097, P = 0.00097
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H V V++ P+ Q+ S D+ + LWD RS P + AH + VDW D
Sbjct: 341 HTGWVTSVKWSPTHDQQLISGSLDNMVKLWDTRSCKAPLYDLA-AHEDKVLSVDWT--DT 397
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGS 279
L+L+G ADN ++ + R T+ VG+
Sbjct: 398 GLLLSGGADNKLYSY-RYSPTTSHVGA 423
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 135 (52.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 57/251 (22%), Positives = 104/251 (41%)
Query: 76 KFKTIIHPGEVNRIR-----ELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHP 130
K K I PG V ++ L + + + A+ + ++IW+ N + H
Sbjct: 141 KHKLTI-PGHVAAVKGVAWISLNEQTGVFASASHDQTIMIWEWNMTTNTAECVHVCKGH- 198
Query: 131 DLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKP--LESPSIGARG 188
++ V ++ + +A+ GS + + A K + K LE ++
Sbjct: 199 --ERGVGCIAVNPAKTQMAS--GSMDTMLKIWSTELQADKGEPSATKKAKLEQDNVRTPV 254
Query: 189 KYL-GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDW 247
L GH + V VQ+ ++ CS D + LWD G +K E N + +
Sbjct: 255 VTLAGHREFVSGVQWIDNTTIATCSW--DHTIKLWDLSMGG---IKTEFTGNKSFFDLSY 309
Query: 248 NPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
+P + +I+T S D ++ ++D R + V + + GHS V +WS +F S
Sbjct: 310 SPLN-GMIITASPDKNLRLYDPRSKHGNFVKNT---YLGHSQWVQTCRWSTTNEYLFVSG 365
Query: 308 AEDGILNIWDH 318
A D + +WD+
Sbjct: 366 AYDNRVKLWDY 376
>SGD|S000002772 [details] [associations]
symbol:CDC40 "Pre-mRNA splicing factor" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IGI]
[GO:0000348 "mRNA branch site recognition" evidence=IGI]
[GO:0005681 "spliceosomal complex" evidence=IEA;IDA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IGI;IMP] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IGI;IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000002772 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938
GO:GO:0005681 EMBL:U28373 RefSeq:NP_010652.3 GeneID:851968
KEGG:sce:YDR364C KO:K12816 GO:GO:0000350 GO:GO:0000389
GO:GO:0000348 HOGENOM:HOG000214672 GeneTree:ENSGT00530000063583
OrthoDB:EOG4CG3J4 EMBL:U17018 PIR:S61159 RefSeq:NP_010654.3
ProteinModelPortal:P40968 SMR:P40968 DIP:DIP-1111N IntAct:P40968
MINT:MINT-617580 STRING:P40968 PaxDb:P40968 EnsemblFungi:YDR364C
GeneID:851972 KEGG:sce:YDR366C CYGD:YDR364c OMA:KGDGPWG
NextBio:970088 Genevestigator:P40968 GermOnline:YDR364C
Uniprot:P40968
Length = 455
Score = 134 (52.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 38/154 (24%), Positives = 74/154 (48%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
+ GH ++ ++F Q F S D + +WD +G + AD+ NP
Sbjct: 202 FQGHNKPIKALRFT-EDCQSFLSSSFDRSVKIWDTETGKVKTRLHLNSTPADVESRPTNP 260
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
H+ + G +++ I +D R + G+ + ++ H +++L +++ PD S F SS+E
Sbjct: 261 HE---FIVGLSNSKILHYDDRVSENQGL---VQTYDHHLSSILALKYFPDGSK-FISSSE 313
Query: 310 DGILNIWDHE-KIGEKQ--DYGELKYPI--IHPA 338
D + IW+++ + KQ D + P +HP+
Sbjct: 314 DKTVRIWENQINVPIKQISDTAQHSMPFLNVHPS 347
Score = 43 (20.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 7/31 (22%), Positives = 15/31 (48%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWD 112
HP ++ LP+ ++ + + + IWD
Sbjct: 161 HPEGTTALKFLPKTGHLILSGGNDHTIKIWD 191
>FB|FBgn0263510 [details] [associations]
symbol:nclb "no child left behind" species:7227 "Drosophila
melanogaster" [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0030723 "ovarian fusome
organization" evidence=IMP] [GO:0008584 "male gonad development"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IMP]
[GO:0036098 "male germ-line stem cell maintenance" evidence=IMP]
[GO:0036099 "female germ-line stem cell maintenance" evidence=IMP]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0035327 "transcriptionally active chromatin" evidence=IDA]
[GO:0030707 "ovarian follicle cell development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030707 eggNOG:COG2319
GO:GO:0008584 GO:GO:0007281 GO:GO:0010468 GO:GO:0031490
GO:GO:0030723 GeneTree:ENSGT00390000017324 KO:K14791 OMA:RGVAKET
RefSeq:NP_610623.1 UniGene:Dm.30901 ProteinModelPortal:A1Z8D0
SMR:A1Z8D0 STRING:A1Z8D0 PaxDb:A1Z8D0 PRIDE:A1Z8D0
EnsemblMetazoa:FBtr0088228 GeneID:36150 KEGG:dme:Dmel_CG6751
UCSC:CG6751-RA CTD:36150 FlyBase:FBgn0263510 InParanoid:A1Z8D0
OrthoDB:EOG4K98TT PhylomeDB:A1Z8D0 GenomeRNAi:36150 NextBio:797092
Bgee:A1Z8D0 GO:GO:0036098 Uniprot:A1Z8D0
Length = 459
Score = 135 (52.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 41/134 (30%), Positives = 61/134 (45%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+D V D+ + + S D +ILWD G P + A I ++++P +
Sbjct: 232 GHKDAVLDLSWNTNFEHILASGSVDQTVILWDMDEGQ-PHTTIT-AFGKQIQSLEFHPQE 289
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSP-IH-KFEGHSAAVLCVQWSPDKSSVFGSSAE 309
ILTG AD + +FD R ++GV S I K +G VL W P ++ F
Sbjct: 290 AQSILTGCADGYVRLFDCRD--AEGVNSSSIEWKVDGEVEKVL---WHPTQTDYFIVGTN 344
Query: 310 DGILNIWDHEKIGE 323
DG L+ D G+
Sbjct: 345 DGTLHYADKRSPGQ 358
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 138 (53.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 47/195 (24%), Positives = 88/195 (45%)
Query: 127 DSHPDLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGA 186
DS D + ++ H +ALA + + +G + K S + NG + S
Sbjct: 3 DSVEDTSTISLRICLEGHANALALNKDNNQIALAGRSLLKVYSINS-NGF----TESCNM 57
Query: 187 RGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWD-ARSGSTPAVKVEKAHNADIHCV 245
RGK + DV + + + + + +WD ++ G + V H H V
Sbjct: 58 RGKNQNLSYSANDVAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTV 117
Query: 246 DWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFG 305
++ + N++++GS D +I FD R SD I+ + +S +V V++SP ++F
Sbjct: 118 TFHSSEPNILISGSQDGTIKCFDIR---SD---KSINTYFCNSESVRDVKFSPHTQNIFS 171
Query: 306 SSAEDGILNIWDHEK 320
+ +E+G + +WD K
Sbjct: 172 AVSENGTVQLWDMRK 186
Score = 131 (51.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 38/131 (29%), Positives = 64/131 (48%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
Y + ++V DV+F P + F +V ++ + LWD R V+ AH ++ DW+P
Sbjct: 150 YFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFT-AHYGPVYTCDWHP 208
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLC-VQWSPDKSSVFGSSA 308
N + TGS D I +++ DG H H+ AV+ V+W P+++ S A
Sbjct: 209 TR-NWLATGSRDKQIKVWNM-----DGRPGLEHTI--HTIAVVGRVKWRPERTYHIASCA 260
Query: 309 --EDGILNIWD 317
D +++WD
Sbjct: 261 LVVDYSVHVWD 271
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 134 (52.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 37/126 (29%), Positives = 58/126 (46%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + + V + S A+E CS D + LWDA +G +K N + V ++P
Sbjct: 243 GHTEAISSVLW--SDAEEICSASWDHTIKLWDAETGG---LKSTLTGNKVFNSVSYSPL- 296
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+ +GS D I ++D R + DG + H+ V V+WSP S + D
Sbjct: 297 CRRLASGSTDRHIRLWDPR--SKDG-SLVLLSLTSHTGWVTSVKWSPTHEHQLISGSLDN 353
Query: 312 ILNIWD 317
I+ +WD
Sbjct: 354 IVKLWD 359
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 45/151 (29%), Positives = 67/151 (44%)
Query: 143 DHVSAL-AAEPGSAKSTASGGA--NSKNASK-----SGGNGDKPLE--SPSIGARGKYL- 191
DH L AE G KST +G NS + S + G+ D+ + P L
Sbjct: 265 DHTIKLWDAETGGLKSTLTGNKVFNSVSYSPLCRRLASGSTDRHIRLWDPRSKDGSLVLL 324
Query: 192 ---GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
H V V++ P+ + S D+ + LWD RS P + AH + CVDW
Sbjct: 325 SLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLWDTRSCKAPLYDLA-AHEDKVLCVDWT 383
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGS 279
+ L+L+G ADN ++ + R T+ VG+
Sbjct: 384 --EAGLLLSGGADNKLYCY-RYPATASDVGA 411
>MGI|MGI:1289332 [details] [associations]
symbol:Tssc1 "tumor suppressing subtransferable candidate 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1289332 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
eggNOG:NOG314403 HOGENOM:HOG000264967 OMA:ACVAWEP EMBL:AC136986
CTD:7260 HOVERGEN:HBG052937 OrthoDB:EOG4C5CJP EMBL:CT010449
EMBL:BC031458 IPI:IPI00321310 RefSeq:NP_958745.2 UniGene:Mm.273724
ProteinModelPortal:Q8K0G5 SMR:Q8K0G5 STRING:Q8K0G5
PhosphoSite:Q8K0G5 PaxDb:Q8K0G5 PRIDE:Q8K0G5
Ensembl:ENSMUST00000035657 GeneID:380752 KEGG:mmu:380752
UCSC:uc007ngb.2 InParanoid:Q8K0G5 NextBio:401194 Bgee:Q8K0G5
CleanEx:MM_TSSC1 Genevestigator:Q8K0G5
GermOnline:ENSMUSG00000036613 Uniprot:Q8K0G5
Length = 386
Score = 127 (49.8 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 49/182 (26%), Positives = 80/182 (43%)
Query: 109 LIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSIQDHVS--ALAAEP-----GSAKSTASG 161
++W E + V+ ADSH ++LW +Q S LA+ G K TA
Sbjct: 140 VVW--EPMGDGKKVISLADSH------ILLWDLQPSSSQAVLASSATLEGRGQLKFTAGR 191
Query: 162 GANSKNASKSGGNGDKPLESPSIGARGK-YL---GHEDTVEDVQFCPSSAQEFCSVGDDS 217
+ N ++ D L + + Y H V D+ F P+ S GDD
Sbjct: 192 WSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDC 251
Query: 218 CLILWDARSGSTPAVKVEKAHNADIHCVDWN-PHDVNLILTGSADNSIHMFDRRKLTSDG 276
+ WD R+ + P VK + H+ + V +N HD L+LTGS+D+ + + + ++S+
Sbjct: 252 KVKFWDTRNVTEP-VKTLEEHSHWVWSVRYNHSHD-QLVLTGSSDSRVILSNMVSISSEP 309
Query: 277 VG 278
G
Sbjct: 310 FG 311
Score = 47 (21.6 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 281 IHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNI 315
I +E H +V V W+ +F S + DG L I
Sbjct: 339 IATYEEHEDSVYAVDWASADPWLFASLSYDGRLVI 373
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 124 (48.7 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 35/105 (33%), Positives = 51/105 (48%)
Query: 212 SVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRK 271
S G D I+WDA +G A ++ H+A VDW + N + S D IH+ K
Sbjct: 283 SAGVDKTTIIWDAHTGE--AKQLFPFHSAPALDVDWQSN--NTFASCSTDMCIHVC---K 335
Query: 272 LTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
L D PI F+GH+ V ++W P ++ S ++D L IW
Sbjct: 336 LGQD---RPIKTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIW 376
Score = 54 (24.1 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 142 QDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVE--- 198
Q + LA + +A + A+ N + ++K+G N E+ GA H D +E
Sbjct: 97 QAYRDKLAQQQAAAAAAAAAATNQQGSAKNGENTANGEEN---GAHTIANNHTDMMEVDG 153
Query: 199 DVQFCPSSA 207
DV+ P+ A
Sbjct: 154 DVEIPPNKA 162
>POMBASE|SPBC577.09 [details] [associations]
symbol:ckn1 "ERCC-8 DNA repair homolog" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0070912 "Ddb1-Ckn1
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC577.09 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006283
PIR:T40553 RefSeq:NP_595307.1 ProteinModelPortal:Q9USR0
STRING:Q9USR0 EnsemblFungi:SPBC577.09.1 GeneID:2540861
KEGG:spo:SPBC577.09 HOGENOM:HOG000248233 KO:K10570 OMA:KIWDTNE
OrthoDB:EOG4BS0W2 NextBio:20801977 GO:GO:0070912 Uniprot:Q9USR0
Length = 404
Score = 133 (51.9 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 49/182 (26%), Positives = 72/182 (39%)
Query: 145 VSALAAEPGSAKSTASGGANSK----NASKSGGNGDKPLESPSIGARGKYLGHEDTVEDV 200
V+AL+ + + SGGANS + D+ L ++ A H+ + D+
Sbjct: 50 VNALSIDNTIHQLMVSGGANSSINVWDLQNIDQKEDEDLILDTLNAVPARTSHKFGITDL 109
Query: 201 QFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVN-LILTGS 259
+ P F S D L +WD ST I+ W+P + LI T
Sbjct: 110 HWFPFDNGIFTSSSFDHTLKVWDV---STLQEAYTFTMEDMIYSHAWSPIASHCLIATAY 166
Query: 260 ADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHE 319
+SI + D + GS H GH+ VL V W P V S + DG +WD
Sbjct: 167 RSSSIRLCDMQS------GSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIR 220
Query: 320 KI 321
K+
Sbjct: 221 KV 222
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 134 (52.2 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 52/169 (30%), Positives = 79/169 (46%)
Query: 154 SAKSTASGGANSKNASKSGGNGDKPLESPSIGARG-KYLGHEDTVEDVQFCPSSAQEFCS 212
+A ++A N K + + + L S AR +Y+GH+D V +QF P S
Sbjct: 19 AAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQG-NLLAS 77
Query: 213 VGDDSCLILWDA-RSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIH---MFD 268
D + LW R G + K AH A + VD++ D L++T S D SI MF
Sbjct: 78 ASRDRTVRLWVLDRKGKSSEFK---AHTAPVRSVDFSA-DGQLLVTASEDKSIKVWSMFR 133
Query: 269 RRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
+R L S +++ H+ V C ++SPD + S +ED + IWD
Sbjct: 134 QRFLYS------LYR---HTHWVRCAKFSPDGRLIV-SCSEDKTIKIWD 172
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 132 (51.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 46/192 (23%), Positives = 83/192 (43%)
Query: 132 LDQSVVLWSIQ---DHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSI--GA 186
+D+S++LW+ ++ L+ G+ +SK + + D L S I G
Sbjct: 86 MDRSILLWNTYGQCENYGILSGHKGAILDL-QWSRDSKTIFSA--SADMTLASWDIESGQ 142
Query: 187 R-GKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCV 245
R +Y+GHE+ + V+ + S DD + +WD R A+ + I V
Sbjct: 143 RIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKE--AIDYLETE-LPITAV 199
Query: 246 DWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFG 305
+ N + +G DN+IH++D RK ++ GH + ++ SPD ++
Sbjct: 200 AQSEAG-NEVFSGGIDNAIHVWDIRKKAI------VYSMAGHMDTITSLEVSPDSQTLLS 252
Query: 306 SSAEDGILNIWD 317
+S D + WD
Sbjct: 253 NSF-DSTVRTWD 263
>RGD|1310362 [details] [associations]
symbol:Wdtc1 "WD and tetratricopeptide repeats 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0006006 "glucose metabolic process"
evidence=IEA;ISO] [GO:0008361 "regulation of cell size"
evidence=IEA;ISO] [GO:0032869 "cellular response to insulin
stimulus" evidence=IEA;ISO] [GO:0035264 "multicellular organism
growth" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0043086 "negative regulation of catalytic
activity" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IEA;ISO] [GO:0055082 "cellular
chemical homeostasis" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 RGD:1310362 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0032869
GO:GO:0004857 GO:GO:0001701 GO:GO:0006006 GO:GO:0008361
GO:GO:0000122 GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264
InterPro:IPR013105 Pfam:PF07719 GeneTree:ENSGT00530000062951
EMBL:CH473968 CTD:23038 KO:K11807 OMA:HRYCGHC OrthoDB:EOG4CRKZJ
GO:GO:0055082 IPI:IPI00366746 RefSeq:NP_001101378.1
UniGene:Rn.16646 Ensembl:ENSRNOT00000011311 GeneID:313020
KEGG:rno:313020 UCSC:RGD:1310362 NextBio:665469 Uniprot:D4A7Z0
Length = 676
Score = 136 (52.9 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 48/170 (28%), Positives = 76/170 (44%)
Query: 184 IGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIH 243
+G + GH V +++ S DD I+WD + + H A+I
Sbjct: 37 LGLEAELQGHSGCVNCLEW-NEKGDLLASGSDDQHTIVWDPLHHKK-LLSMHTGHTANIF 94
Query: 244 CVDWNPHDVNLIL-TGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSS 302
V + PH + IL TG+AD+ +H+ D LT V IH F H+ V + +P +
Sbjct: 95 SVKFLPHAGDRILITGAADSKVHVHD---LT---VKETIHMFGDHTNRVKRIATAPMWPN 148
Query: 303 VFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLT 352
F S+AEDG++ +D + E + E+ + Y M +E K LT
Sbjct: 149 TFWSAAEDGLIRQYD---LRENSKHSEVLIDLTE--YCGPM--VEAKCLT 191
>MGI|MGI:2685541 [details] [associations]
symbol:Wdtc1 "WD and tetratricopeptide repeats 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0004857 "enzyme inhibitor activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006006 "glucose metabolic process" evidence=IMP] [GO:0008361
"regulation of cell size" evidence=IMP] [GO:0032869 "cellular
response to insulin stimulus" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042393 "histone
binding" evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0043086 "negative regulation of catalytic
activity" evidence=IDA] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IMP;IDA] [GO:0055082 "cellular
chemical homeostasis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2685541
GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0032869 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00530000062951 CTD:23038
HOGENOM:HOG000231334 HOVERGEN:HBG059105 KO:K11807 OMA:HRYCGHC
OrthoDB:EOG4CRKZJ ChiTaRS:WDTC1 GO:GO:0055082 EMBL:BC048824
EMBL:BC057107 IPI:IPI00108450 RefSeq:NP_955010.1 UniGene:Mm.226576
ProteinModelPortal:Q80ZK9 SMR:Q80ZK9 STRING:Q80ZK9
PhosphoSite:Q80ZK9 PaxDb:Q80ZK9 PRIDE:Q80ZK9
Ensembl:ENSMUST00000043305 GeneID:230796 KEGG:mmu:230796
InParanoid:Q80ZK9 NextBio:380168 Bgee:Q80ZK9 CleanEx:MM_WDTC1
Genevestigator:Q80ZK9 GermOnline:ENSMUSG00000037622 Uniprot:Q80ZK9
Length = 677
Score = 136 (52.9 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 48/170 (28%), Positives = 76/170 (44%)
Query: 184 IGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIH 243
+G + GH V +++ S DD I+WD + + H A+I
Sbjct: 37 LGLEAELQGHSGCVNCLEW-NEKGDLLASGSDDQHTIVWDPLHHKK-LLSMHTGHTANIF 94
Query: 244 CVDWNPHDVNLIL-TGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSS 302
V + PH + IL TG+AD+ +H+ D LT V IH F H+ V + +P +
Sbjct: 95 SVKFLPHAGDRILITGAADSKVHVHD---LT---VKETIHMFGDHTNRVKRIATAPMWPN 148
Query: 303 VFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLT 352
F S+AEDG++ +D + E + E+ + Y M +E K LT
Sbjct: 149 TFWSAAEDGLIRQYD---LRENSKHSEVLIDLTE--YCGPM--VEAKCLT 191
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 135 (52.6 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 48/192 (25%), Positives = 85/192 (44%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H + V D+ F P + S D L +WD + +KV + H ++ ++P D
Sbjct: 169 HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGN-MMKVLRGHQNWVYSCAFSP-DS 226
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGI 312
+++ + A ++ ++D K T I K EGH V+ +SPD ++ +++ D
Sbjct: 227 SMLCSVGASKAVFLWDMDKYTM------IRKLEGHHHDVVACDFSPD-GALLATASYDTR 279
Query: 313 LNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVC-LTMVK 371
+ IWD ++G L +P P ++ D + + S+ H L V L K
Sbjct: 280 VYIWDPHTGDILMEFGHL-FPPPTPIFAGGAND---RWVRSVSFS--HDGLHVASLADDK 333
Query: 372 VLEIWRMIDLIY 383
++ WR ID Y
Sbjct: 334 MVRFWR-IDEDY 344
Score = 39 (18.8 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 85 EVNRIRELPQNSKIVATHTDSPDVLIWDV 113
E +R R Q+ ++AT ++ + IWDV
Sbjct: 130 EWHRFR-FGQDQLLLATGLNNGRIKIWDV 157
>POMBASE|SPAC4F8.11 [details] [associations]
symbol:SPAC4F8.11 "WD repeat protein, human WDR24 family"
species:4896 "Schizosaccharomyces pombe" [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=NAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC4F8.11 GO:GO:0005829 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0005778 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 PIR:T38840 RefSeq:NP_593862.1
ProteinModelPortal:O14186 EnsemblFungi:SPAC4F8.11.1 GeneID:2543518
KEGG:spo:SPAC4F8.11 OrthoDB:EOG4RBTST NextBio:20804528
Uniprot:O14186
Length = 846
Score = 137 (53.3 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 41/135 (30%), Positives = 63/135 (46%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
+ G+ + DV F PS EF + D L WD R P +K+ AHN + CV+++P
Sbjct: 173 FRGNSEAARDVVFSPSEPNEFVAAYDSGILQKWDIRFPKLPFLKLA-AHNGVVLCVNYSP 231
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS-- 307
+ V L G D +I ++D TS+ S I + + + CV+W P GS+
Sbjct: 232 NGVFLASCGR-DKTIRIWDS---TSNKKKSLITI--NNVSPLNCVRWRPANQQSRGSNQL 285
Query: 308 -----AEDGILNIWD 317
D +N+WD
Sbjct: 286 ASSSLVGDTAINVWD 300
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 133 (51.9 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 42/186 (22%), Positives = 85/186 (45%)
Query: 191 LGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPH 250
+ H D V D+ F P + S D L +WD + VKV H ++ ++P
Sbjct: 172 MDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGN-MVKVLWGHPNRVYSSAFSP- 229
Query: 251 DVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAED 310
D +++ + A ++ +++ K T I K EGH V+ ++SPD ++ +++ D
Sbjct: 230 DSSVLCSVGASKAVLLWNMDKYTL------IRKLEGHHNDVVSCEFSPD-GALLATASYD 282
Query: 311 GILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLTSIGMHLIHGRLLVCLTMV 370
+ +WDH++ + G L +P P ++ D + + S+ GR + ++
Sbjct: 283 TRVIVWDHQRGSILLELGHL-FPPPSPIFAGGAND---RWVRSVSF-CADGRHIASVSDD 337
Query: 371 KVLEIW 376
+++ W
Sbjct: 338 RLVRFW 343
>UNIPROTKB|G4MXK2 [details] [associations]
symbol:MGG_01236 "WD repeat-containing protein slp1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001232 KO:K03363 RefSeq:XP_003714140.1
ProteinModelPortal:G4MXK2 EnsemblFungi:MGG_01236T0 GeneID:2679415
KEGG:mgr:MGG_01236 Uniprot:G4MXK2
Length = 593
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 43/156 (27%), Positives = 74/156 (47%)
Query: 191 LGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKA-HNADIHCVDWNP 249
+ H V +++ AQ + G+D+ + +WDARS + P K K H A + + W P
Sbjct: 403 VSHTSEVCGLEWRSDGAQ-LATGGNDNLVSIWDARSLAVP--KFTKTNHKAAVKALAWCP 459
Query: 250 HDVNLILTG--SADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSS 307
++NL+ TG S D IH ++ TS G+ ++ + S V ++WSP + SS
Sbjct: 460 WNMNLLATGGGSYDRHIHFWNS---TS---GARVNSIDTGSQ-VTSLRWSPHYREIVSSS 512
Query: 308 A-EDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSD 342
D L+IW + + + + ++H S D
Sbjct: 513 GFPDNSLSIWSYPTLVRTVEIPAHESRVLHSCLSPD 548
>ASPGD|ASPL0000062179 [details] [associations]
symbol:AN0814 species:162425 "Emericella nidulans"
[GO:0033314 "mitotic DNA replication checkpoint" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0007094 "mitotic spindle assembly
checkpoint" evidence=IEA] [GO:0010997 "anaphase-promoting complex
binding" evidence=IEA] [GO:0033597 "mitotic checkpoint complex"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 EMBL:AACD01000013
KO:K03363 HOGENOM:HOG000195514 OrthoDB:EOG4KD9V8 RefSeq:XP_658418.1
ProteinModelPortal:Q5BF66 STRING:Q5BF66
EnsemblFungi:CADANIAT00001846 GeneID:2876591 KEGG:ani:AN0814.2
OMA:QVAIGLE Uniprot:Q5BF66
Length = 618
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 64/246 (26%), Positives = 105/246 (42%)
Query: 105 SPDVLIWDVEAQPNRHAV---LGAADSHP-DLDQSVVLWSIQDHVSALAAEPGSAKSTAS 160
SPD I V+ + V LG + D+++ L S+ H S + G +K T S
Sbjct: 343 SPDTYISSVKWSGDGAYVGVGLGTGEVQIWDVEEGTKLRSMFGHESRVGVM-GWSKHTLS 401
Query: 161 GGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLI 220
GA S N D + + + + H V +++ AQ + G+D+ +
Sbjct: 402 TGARSGLVF----NHDVRIAQHKVA---ELVSHTSEVCGLEWRSDGAQ-LATGGNDNLVN 453
Query: 221 LWDARSGSTPAVKVEKA-HNADIHCVDWNPHDVNLILTG--SADNSIHMFDRRKLTSDGV 277
+WDARS S P K K H A + + W P +NL+ TG S D IH ++ T+ G
Sbjct: 454 IWDARSLSAP--KFTKTNHRAAVKALSWCPWQLNLLATGGGSYDRHIHFWN----TTTGA 507
Query: 278 GSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA-EDGILNIWDHEKIGEKQDYGELKYPIIH 336
+ + + S V ++WS + SS D L+IW + + + + ++H
Sbjct: 508 RT--NSIDTGSQ-VTSLRWSNHYREIVSSSGFPDNSLSIWSYPTLVRNIEIPAHETRVLH 564
Query: 337 PAYSSD 342
S D
Sbjct: 565 SCLSPD 570
>DICTYBASE|DDB_G0274279 [details] [associations]
symbol:tssc1 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0274279 GO:GO:0045335 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000151_GR EMBL:AAFI02000012 eggNOG:NOG314403
RefSeq:XP_643981.1 ProteinModelPortal:Q86A97 STRING:Q86A97
PRIDE:Q86A97 EnsemblProtists:DDB0234267 GeneID:8619407
KEGG:ddi:DDB_G0274279 OMA:RINESMD ProtClustDB:CLSZ2729203
Uniprot:Q86A97
Length = 400
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 133 DQSVVLWS-IQD-HVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSI-GARGK 189
D ++ LWS I D + + + G+ + G N +++ D ++ A+
Sbjct: 162 DSNIRLWSKIDDQNEPTVIKQFGNLSKLSVGSINPNISNQLATANDVNIKGWDFRNAKET 221
Query: 190 YL---GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVD 246
+ H + + D+ F P+ S GDD L +WD R P VK+ HN I
Sbjct: 222 FSMDKAHSEQIRDIDFNPNKPYYLLSAGDDCKLKIWDTRQTRDP-VKIFSGHNHWIWSAK 280
Query: 247 WNPHDVNLILTGSADNSIHMFDRRKLTS 274
+N + LI+T S+DN++ +++ L+S
Sbjct: 281 FNRYHDQLIITSSSDNTVKLWNLYSLSS 308
>MGI|MGI:1926139 [details] [associations]
symbol:Wsb1 "WD repeat and SOCS box-containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:1926139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ ChiTaRS:WSB1 EMBL:AF033186 IPI:IPI00119829
RefSeq:NP_062627.3 UniGene:Mm.307022 UniGene:Mm.474790
ProteinModelPortal:O54927 SMR:O54927 IntAct:O54927 STRING:O54927
PhosphoSite:O54927 PRIDE:O54927 Ensembl:ENSMUST00000017821
GeneID:78889 KEGG:mmu:78889 InParanoid:O54927 NextBio:349672
Bgee:O54927 CleanEx:MM_WSB1 Genevestigator:O54927
GermOnline:ENSMUSG00000017677 Uniprot:O54927
Length = 421
Score = 134 (52.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 43/188 (22%), Positives = 83/188 (44%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H + V D+ F P + S D L +WD + VKV +AH ++ ++P D
Sbjct: 169 HIEMVRDLTFAPDGSLLLVSASRDKTLRVWDLKDDGN-MVKVLRAHQNWVYSCAFSP-DC 226
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGI 312
+++ + A ++ +++ K T I K EGH V+ +SPD ++ +++ D
Sbjct: 227 SMLCSVGASKAVFLWNMDKYTM------IRKLEGHHHDVVACDFSPD-GALLATASYDTR 279
Query: 313 LNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLD--IETKLLTSIGMHLIHGRLLVCLTMV 370
+ +WD ++G L +P P ++ D + + G+H+ L
Sbjct: 280 VYVWDPHNGDLLMEFGHL-FPSPTPIFAGGANDRWVRAVSFSHDGLHV------ASLADD 332
Query: 371 KVLEIWRM 378
K++ WR+
Sbjct: 333 KMVRFWRI 340
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 85 EVNRIRELPQNSKIVATHTDSPDVLIWDV 113
E +R R Q+ ++AT ++ + IWDV
Sbjct: 130 EWHRFR-FGQDQLLLATGLNNGRIKIWDV 157
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + V V + S +E CS D + LWDA +GS VK + + + ++P
Sbjct: 255 GHNEAVSSVLWLDS--EEICSASWDHTIRLWDAETGS---VKTSLTGSKVFNHISYSPL- 308
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+ +GS D + ++D R + DG + HS V V+W+P S + D
Sbjct: 309 CRRLASGSTDRHVRLWDPR--SKDG-SLVLLSLTSHSGWVTAVKWAPSHEHQLVSGSLDN 365
Query: 312 ILNIWD 317
++ +WD
Sbjct: 366 LVKLWD 371
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 44/150 (29%), Positives = 64/150 (42%)
Query: 132 LDQSVVLWSIQDHVSAL-AAEPGSAKSTASGGANSKNASKS-------GGNGDKPLE--S 181
LD + + DH L AE GS K++ +G + S S G+ D+ +
Sbjct: 266 LDSEEICSASWDHTIRLWDAETGSVKTSLTGSKVFNHISYSPLCRRLASGSTDRHVRLWD 325
Query: 182 PSIGARGKYL----GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKA 237
P L H V V++ PS + S D+ + LWD RS P V A
Sbjct: 326 PRSKDGSLVLLSLTSHSGWVTAVKWAPSHEHQLVSGSLDNLVKLWDTRSCKAPLYDVS-A 384
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMF 267
H + CVDW D L+L+G ADN ++ +
Sbjct: 385 HEDKVLCVDWT--DSRLMLSGGADNKLYTY 412
>POMBASE|SPBC1A4.07c [details] [associations]
symbol:SPBC1A4.07c "U3 snoRNP-associated protein Sof1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1A4.07c GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 PIR:T39855 RefSeq:NP_595809.1
ProteinModelPortal:O74340 STRING:O74340 EnsemblFungi:SPBC1A4.07c.1
GeneID:2540796 KEGG:spo:SPBC1A4.07c OrthoDB:EOG4GXJWG
NextBio:20801914 Uniprot:O74340
Length = 436
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 67/271 (24%), Positives = 119/271 (43%)
Query: 73 FVKKFKTIIHPGEVNRIRELPQNSK-IVATHTDSPD--VLIWDVEAQPNR---HAVLGAA 126
F F + G + + L +++K ++ + S D V +WD + R A G
Sbjct: 51 FAAPFLGQLGRGHQDGVYSLARDTKTLIDCASGSGDGAVKLWDASERCERWTSKAHEGIV 110
Query: 127 DSHPDLDQSVVLWSIQD-HVSALAAEPGSAKSTASGGANSKNASKSGGNGD---KPLESP 182
+Q VL D +V L + G K + G ++ + S G GD E+
Sbjct: 111 RGLVFSNQGDVLSCASDRYVYMLNKQDGKVKRSYLGDSSLLDIDTSKG-GDLFATSGENV 169
Query: 183 SIG--ARG----KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVK-VE 235
SI +R K+ DT+ V+F + S G D ++++D R+ S+P K +
Sbjct: 170 SIWDYSRDTPVTKFEWGADTLPVVKFNYTETSVLASAGMDRSIVIYDLRT-SSPLTKLIT 228
Query: 236 KAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQ 295
K + + WNP + + GS D++++M+D R L +H ++ H +AV+ V
Sbjct: 229 KLRT---NSISWNPMEAFNFVAGSEDHNLYMYDMRNLKR-----ALHVYKDHVSAVMSVD 280
Query: 296 WSPDKSSVFGSSAEDGILNIWDHEKIGEKQD 326
+SP F S + D + I++ + G +D
Sbjct: 281 FSPTGQE-FVSGSYDKTIRIYNVRE-GHSRD 309
>CGD|CAL0001184 [details] [associations]
symbol:orf19.4395 species:5476 "Candida albicans" [GO:0003779
"actin binding" evidence=IEA] [GO:0051286 "cell tip" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043332 "mating projection tip" evidence=IEA]
[GO:0032153 "cell division site" evidence=IEA] [GO:0030042 "actin
filament depolymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001184 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AACQ01000090 RefSeq:XP_715171.1
ProteinModelPortal:Q5A045 STRING:Q5A045 GeneID:3643203
KEGG:cal:CaO19.4395 Uniprot:Q5A045
Length = 613
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/130 (33%), Positives = 62/130 (47%)
Query: 193 HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDV 252
H + V DV+F P + SVG D + ++ ++G K+EKAH I V W P D
Sbjct: 197 HNNVVRDVKFSPDG-EYIVSVGSDRVIAIYQGKTGEF-VKKIEKAHEGGIFAVAWLP-DS 253
Query: 253 NLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQW---SPDKSSVFGSSAE 309
+T SADN++ +K T DG + KFE S + Q + K V S
Sbjct: 254 KHFITASADNTL-----KKWTLDGENT--QKFEISSTTSVGNQQVGLALTKEFVVSLSG- 305
Query: 310 DGILNIWDHE 319
+G LN +DHE
Sbjct: 306 NGNLNYFDHE 315
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 63/260 (24%), Positives = 103/260 (39%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSI 141
H EV + P + ++AT + V +W+V+ + + + + +SH D V+W
Sbjct: 104 HENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEE-DEYECVSVLNSHTQ-DVKHVVWHP 160
Query: 142 QDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQ 201
+ A A+ + K G + + LE GHE TV +
Sbjct: 161 SQELLASASYDDTVKLYQEEGDDWVCCAT--------LE-----------GHESTVWSIA 201
Query: 202 FCPSSAQEFCSVGDDSCLILWD----------ARSGSTPAVK----VEKAHNADIHCVDW 247
F PS Q S DD + +W A SGS P+ K + H I+ V W
Sbjct: 202 FDPSG-QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCVCTLSGFHTRTIYDVAW 260
Query: 248 NPHDVNLILTGSADNSIHMFDRRKLTSDG----VGSPIHKFEGHSAAVLCVQWSPDKSSV 303
+ T D++I +F+ SD H + HS V CV W+P ++ +
Sbjct: 261 CQL-TGALATACGDDAIRVFEEDP-GSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEAGL 318
Query: 304 FGSSAEDGILNIWD-HEKIG 322
S ++DG + W+ H+ G
Sbjct: 319 LASCSDDGEVAFWEYHQPAG 338
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/188 (23%), Positives = 75/188 (39%)
Query: 133 DQSVVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSI--GARGK- 189
D+ + +W + + + A G + + + + DK L I G R +
Sbjct: 76 DRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRR 135
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNP 249
+ GH + V VQ Q CS DD + +WDAR A +E C
Sbjct: 136 FKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHA-AHTLESPFQVTAVCFGDTG 194
Query: 250 HDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAE 309
V ++G DN + ++D RK + +H GHS + + SP+ + ++A
Sbjct: 195 EQV---ISGGIDNEVKIWDIRKQ------AVLHHLRGHSDTITGMSLSPEGDFIL-TNAM 244
Query: 310 DGILNIWD 317
D L +WD
Sbjct: 245 DNTLRVWD 252
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 67/274 (24%), Positives = 110/274 (40%)
Query: 63 EQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAV 122
EQF+E S V F H GE+ + P ++ +VAT +W + +
Sbjct: 54 EQFDENDDS--VHTFTG--HKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAEL 109
Query: 123 LGAADSHPDL-----DQSVVLWSIQDHVSALAAEPGSAKSTASG-GA-------NSKNAS 169
G DS L Q + + V A G+ K G GA + +
Sbjct: 110 PGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHI 169
Query: 170 KSGGNGDKPL---ESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS 226
G+ D L + + GH V F P + C+ DD+ LI+W+ ++
Sbjct: 170 VLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDG-KLICTGSDDASLIVWNPKT 228
Query: 227 -GSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFE 285
S VK H + C+D N + +L ++GS D S+H+ + +T G +
Sbjct: 229 CESIHIVKGHPYHTEGLTCLDINSNS-SLAISGSKDGSVHIVNI--VT----GKVVSSLN 281
Query: 286 GHSAAVLCVQWSPDKSSV--FGSSAEDGILNIWD 317
H+ +V CV++SP +++ + D L IWD
Sbjct: 282 SHTDSVECVKFSPSSATIPLAATGGMDKKLIIWD 315
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 47/200 (23%), Positives = 86/200 (43%)
Query: 133 DQSVVLWSIQ--DHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKY 190
D S+++W+ + + + + P + NS ++ G+ D + +I GK
Sbjct: 218 DASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNI-VTGKV 276
Query: 191 LG----HEDTVEDVQFCPSSAQ-EFCSVGD-DSCLILWDARSGSTPAVKVEKAHNADIHC 244
+ H D+VE V+F PSSA + G D LI+WD + STP E H +
Sbjct: 277 VSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQH-STPRFICE--HEEGVTS 333
Query: 245 VDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVF 304
+ W + TG A+ ++ ++D +G+ +H + GH AV + S + +
Sbjct: 334 LTWIGTS-KYLATGCANGTVSIWDSL------LGNCVHTYHGHQDAVQAISVSTNTDFIV 386
Query: 305 GSSAEDGILNIWDHEKIGEK 324
S D +++ + K
Sbjct: 387 SVSV-DNTARVFESSEFQNK 405
>TAIR|locus:505006640 [details] [associations]
symbol:AT5G27945 "AT5G27945" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005680 "anaphase-promoting complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 KO:K03363
IPI:IPI00534669 RefSeq:NP_568505.1 UniGene:At.55046
ProteinModelPortal:F4K5R6 SMR:F4K5R6 EnsemblPlants:AT5G27945.1
GeneID:832862 KEGG:ath:AT5G27945 PhylomeDB:F4K5R6 Uniprot:F4K5R6
Length = 428
Score = 127 (49.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GHE V + + + + G D ++ D R S+ + H ++ + W+
Sbjct: 193 GHESRVGSLAW---NNHILTTGGMDGKIVNNDVRIRSS-IIGTYVGHTEEVCGLKWSESG 248
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVF--GSSAE 309
L +G DN +H++DR +S+ +H+FE H+AAV + W P ++S+ G
Sbjct: 249 KKLA-SGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVG 307
Query: 310 DGILNIWD 317
DG +N W+
Sbjct: 308 DGKINFWN 315
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 68 EARSPFVKKFKTIIHP-GEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRH 120
+A S + K TI G V I Q+ +A D+ +V +WD + NRH
Sbjct: 136 DASSCYTSKLVTIDDENGPVTSIN-WTQDGLDLAVGLDNSEVQVWDCVS--NRH 186
>UNIPROTKB|Q8N5D0 [details] [associations]
symbol:WDTC1 "WD and tetratricopeptide repeats protein 1"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0008361
"regulation of cell size" evidence=IEA] [GO:0032869 "cellular
response to insulin stimulus" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0055082 "cellular chemical
homeostasis" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 GO:GO:0043231 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0032869 EMBL:CH471059 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 PDB:3I7N PDBsum:3I7N EMBL:AL663123 EMBL:AL590640
EMBL:AK001734 EMBL:BC032523 EMBL:AB028960 IPI:IPI00186384
IPI:IPI00398202 IPI:IPI00398203 IPI:IPI00398204 IPI:IPI00398205
IPI:IPI00398206 RefSeq:NP_055838.2 UniGene:Hs.469154
ProteinModelPortal:Q8N5D0 SMR:Q8N5D0 DIP:DIP-31627N IntAct:Q8N5D0
STRING:Q8N5D0 PhosphoSite:Q8N5D0 DMDM:41018470 PaxDb:Q8N5D0
PRIDE:Q8N5D0 DNASU:23038 Ensembl:ENST00000319394
Ensembl:ENST00000361771 Ensembl:ENST00000447062 GeneID:23038
KEGG:hsa:23038 UCSC:uc001bno.3 UCSC:uc001bnq.3 CTD:23038
GeneCards:GC01P027561 HGNC:HGNC:29175 HPA:HPA028177 HPA:HPA028180
HPA:HPA028182 neXtProt:NX_Q8N5D0 PharmGKB:PA134981539
HOGENOM:HOG000231334 HOVERGEN:HBG059105 InParanoid:Q8N5D0 KO:K11807
OMA:HRYCGHC OrthoDB:EOG4CRKZJ PhylomeDB:Q8N5D0 ChiTaRS:WDTC1
EvolutionaryTrace:Q8N5D0 GenomeRNAi:23038 NextBio:44050 Bgee:Q8N5D0
CleanEx:HS_WDTC1 Genevestigator:Q8N5D0 GermOnline:ENSG00000142784
GO:GO:0055082 Uniprot:Q8N5D0
Length = 677
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 47/170 (27%), Positives = 76/170 (44%)
Query: 184 IGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIH 243
+G + GH V +++ S DD I+WD + + H A+I
Sbjct: 37 LGLEAELQGHSGCVNCLEW-NEKGDLLASGSDDQHTIVWDPLHHKK-LLSMHTGHTANIF 94
Query: 244 CVDWNPHDVNLIL-TGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSS 302
V + PH + IL TG+AD+ +H+ D LT V IH F H+ V + +P +
Sbjct: 95 SVKFLPHAGDRILITGAADSKVHVHD---LT---VKETIHMFGDHTNRVKRIATAPMWPN 148
Query: 303 VFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLT 352
F S+AEDG++ +D + E + E+ + Y + +E K LT
Sbjct: 149 TFWSAAEDGLIRQYD---LRENSKHSEVLIDLTE--YCGQL--VEAKCLT 191
>UNIPROTKB|B6CVL4 [details] [associations]
symbol:WDTC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055082 "cellular chemical homeostasis" evidence=IEA]
[GO:0045717 "negative regulation of fatty acid biosynthetic
process" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IEA]
[GO:0008361 "regulation of cell size" evidence=IEA] [GO:0006006
"glucose metabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004857
"enzyme inhibitor activity" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00530000062951 CTD:23038
HOGENOM:HOG000231334 HOVERGEN:HBG059105 KO:K11807 OMA:HRYCGHC
OrthoDB:EOG4CRKZJ GO:GO:0055082 EMBL:CU466983 EMBL:FP067355
EMBL:EU559626 RefSeq:NP_001129436.1 UniGene:Ssc.11356
ProteinModelPortal:B6CVL4 STRING:B6CVL4 Ensembl:ENSSSCT00000003964
GeneID:100190994 KEGG:ssc:100190994 Uniprot:B6CVL4
Length = 678
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 47/170 (27%), Positives = 76/170 (44%)
Query: 184 IGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIH 243
+G + GH V +++ S DD I+WD + + H A+I
Sbjct: 37 LGLEAELQGHSGCVNCLEW-NEKGDLLASGSDDQHTIVWDPLHHKK-LLSMHTGHTANIF 94
Query: 244 CVDWNPHDVNLIL-TGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSS 302
V + PH + IL TG+AD+ +H+ D LT V IH F H+ V + +P +
Sbjct: 95 SVKFLPHAGDRILITGAADSKVHVHD---LT---VKETIHMFGDHTNRVKRIATAPMWPN 148
Query: 303 VFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLT 352
F S+AEDG++ +D + E + E+ + Y + +E K LT
Sbjct: 149 TFWSAAEDGLIRQYD---LRENSKHSEVLIDLTE--YCGQL--VEAKCLT 191
>UNIPROTKB|E2RA21 [details] [associations]
symbol:WDTC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055082 "cellular chemical homeostasis"
evidence=IEA] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008361 "regulation of cell size" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 GO:GO:0001701
GO:GO:0006006 GO:GO:0008361 GO:GO:0000122 GO:GO:0045717
Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105 Pfam:PF07719
GeneTree:ENSGT00530000062951 OMA:HRYCGHC GO:GO:0055082
EMBL:AAEX03001717 ProteinModelPortal:E2RA21
Ensembl:ENSCAFT00000019377 Uniprot:E2RA21
Length = 679
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 47/170 (27%), Positives = 76/170 (44%)
Query: 184 IGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIH 243
+G + GH V +++ S DD I+WD + + H A+I
Sbjct: 37 LGLEAELQGHSGCVNCLEW-NEKGDLLASGSDDQHTIVWDPLHHKK-LLSMHTGHTANIF 94
Query: 244 CVDWNPHDVNLIL-TGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSS 302
V + PH + IL TG+AD+ +H+ D LT V IH F H+ V + +P +
Sbjct: 95 SVKFLPHAGDRILITGAADSKVHVHD---LT---VKETIHMFGDHTNRVKRIATAPMWPN 148
Query: 303 VFGSSAEDGILNIWDHEKIGEKQDYGELKYPIIHPAYSSDMLDIETKLLT 352
F S+AEDG++ +D + E + E+ + Y + +E K LT
Sbjct: 149 TFWSAAEDGLIRQYD---LRENSKHSEVLIDLTE--YCGQL--VEAKCLT 191
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 60/267 (22%), Positives = 109/267 (40%)
Query: 80 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPD---LDQS- 135
+ H VN ++ ++S+++ T + V +W + +PN L S D D S
Sbjct: 13 VAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLYGHSSGIDSVTFDASE 71
Query: 136 -----------VVLWSIQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSI 184
+ LW +++ + G + S + + G+ D L+ I
Sbjct: 72 GLVAAGAASGTIKLWDLEE-AKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDI 130
Query: 185 GARG---KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNAD 241
+G Y GH V ++F P + S G+D+ + +WD +G + K+H
Sbjct: 131 RKKGCIHTYKGHTRGVNVLRFTPDG-RWIVSGGEDNVVKVWDLTAGKL--LHEFKSHEGK 187
Query: 242 IHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKS 301
I +D++PH+ L+ TGSAD ++ +D G G + V C+ ++PD
Sbjct: 188 IQSLDFHPHEF-LLATGSADKTVKFWDLETFELIGSGGT------ETTGVRCLTFNPDGK 240
Query: 302 SVFGSSAEDGILNIWDHEKIGEKQDYG 328
SV E + W+ + + D G
Sbjct: 241 SVLCGLQESLKIFSWEPIRCHDGVDVG 267
>GENEDB_PFALCIPARUM|PF13_0149 [details] [associations]
symbol:PF13_0149 "chromatin assembly factor 1
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006333
"chromatin assembly or disassembly" evidence=ISS] [GO:0051082
"unfolded protein binding" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 84 (34.6 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 73 FVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPN 118
F K K ++HPGEV R LP NS + T T + + L++D P+
Sbjct: 141 FEVKAK-LLHPGEVIRATNLPSNSFFIVTQTSNGNALLFDYTKHPS 185
Score = 69 (29.3 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 13 DDRYTQWKSLVPVLYDWLANHNLVWPSLS 41
++R+ W+ P LY L H L WPSL+
Sbjct: 38 NERHIIWRKNTPFLYSSLLKHKLDWPSLT 66
Score = 66 (28.3 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 24/121 (19%), Positives = 50/121 (41%)
Query: 199 DVQFCPSSAQEFCSVGDDSCLILWDARSGS--TPAVKVEKAHNADIHCVDWNPHDVNLIL 256
D+ F P + D+ + ++D R + T A +N ++ ++ +
Sbjct: 392 DIFFHPKFSNALGVCDDNGYMSIYDIRKKNFFTKAEICFNDYNEPMNTFSFDNFSEYIFS 451
Query: 257 TGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
G +D I ++D R + K + H+ + +++ S +F S ++DG IW
Sbjct: 452 CGYSDGLISVWDMRYNKES-----LLKLKYHTQGINRIKFGMISSGIFASCSDDGTACIW 506
Query: 317 D 317
D
Sbjct: 507 D 507
Score = 62 (26.9 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 189 KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWD-ARSGSTPAVKVEKAHNADIHCVDW 247
KY H + ++F S+ F S DD +WD +R+ +T + ++K + DI+
Sbjct: 475 KY--HTQGINRIKFGMISSGIFASCSDDGTACIWDISRNNNTQILPLQKTED-DIYN--- 528
Query: 248 NPHDV 252
NP+ V
Sbjct: 529 NPNPV 533
Score = 39 (18.8 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 5/31 (16%), Positives = 14/31 (45%)
Query: 286 GHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
GH ++ + W+ + + D +++W
Sbjct: 543 GHIGSIYDLAWANSNTFTIATVGVDNSIHVW 573
>UNIPROTKB|Q8IE52 [details] [associations]
symbol:PF13_0149 "Chromatin assembly factor 1 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0006333 "chromatin assembly
or disassembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 84 (34.6 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 73 FVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPN 118
F K K ++HPGEV R LP NS + T T + + L++D P+
Sbjct: 141 FEVKAK-LLHPGEVIRATNLPSNSFFIVTQTSNGNALLFDYTKHPS 185
Score = 69 (29.3 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 13 DDRYTQWKSLVPVLYDWLANHNLVWPSLS 41
++R+ W+ P LY L H L WPSL+
Sbjct: 38 NERHIIWRKNTPFLYSSLLKHKLDWPSLT 66
Score = 66 (28.3 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 24/121 (19%), Positives = 50/121 (41%)
Query: 199 DVQFCPSSAQEFCSVGDDSCLILWDARSGS--TPAVKVEKAHNADIHCVDWNPHDVNLIL 256
D+ F P + D+ + ++D R + T A +N ++ ++ +
Sbjct: 392 DIFFHPKFSNALGVCDDNGYMSIYDIRKKNFFTKAEICFNDYNEPMNTFSFDNFSEYIFS 451
Query: 257 TGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
G +D I ++D R + K + H+ + +++ S +F S ++DG IW
Sbjct: 452 CGYSDGLISVWDMRYNKES-----LLKLKYHTQGINRIKFGMISSGIFASCSDDGTACIW 506
Query: 317 D 317
D
Sbjct: 507 D 507
Score = 62 (26.9 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 189 KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWD-ARSGSTPAVKVEKAHNADIHCVDW 247
KY H + ++F S+ F S DD +WD +R+ +T + ++K + DI+
Sbjct: 475 KY--HTQGINRIKFGMISSGIFASCSDDGTACIWDISRNNNTQILPLQKTED-DIYN--- 528
Query: 248 NPHDV 252
NP+ V
Sbjct: 529 NPNPV 533
Score = 39 (18.8 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 5/31 (16%), Positives = 14/31 (45%)
Query: 286 GHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
GH ++ + W+ + + D +++W
Sbjct: 543 GHIGSIYDLAWANSNTFTIATVGVDNSIHVW 573
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 59/249 (23%), Positives = 103/249 (41%)
Query: 87 NRIRELPQNSK---IVATHTDSPDVLIWDVEAQPNRHAVLGAADSHP---DLDQSVVLWS 140
N I+ N+K ++ H D V+ DV A +H + G+ D DL++ +
Sbjct: 405 NEIKTYDLNTKRAQVLRGHEDL--VMSVDVSAD-GKHIISGSRDKSAMIWDLEKKESIAQ 461
Query: 141 IQDHVS-----ALAAEPGSAKS--TASGGANSK-----NASKSGGNGDKPLESPSIGARG 188
+ H AL +P ++ TAS K + + S G D + I A
Sbjct: 462 LTGHTGVISCVALPKKPSTSMFAITASDDRTIKLWKGFSTTSSSGGDDSKKKDKKISASV 521
Query: 189 KYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWN 248
+ HE + + P+ + F + DS + LW+ + P + KAH + V+++
Sbjct: 522 TKIAHEKDINSISIAPND-KIFATASQDSYVKLWNVNN-LEPITSI-KAHRRGVWHVEFS 578
Query: 249 PHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSA 308
P D LT SAD +I ++ T + EGH +VL + + S A
Sbjct: 579 PID-QCFLTCSADGTIKIWSLSDYTC------LKTLEGHKGSVLKASFISFGMQIV-SVA 630
Query: 309 EDGILNIWD 317
+G++ +W+
Sbjct: 631 SEGLIKLWN 639
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 121 (47.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 35/105 (33%), Positives = 50/105 (47%)
Query: 212 SVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRK 271
S G D I+WDA +G A + H+A VDW + N + S D IH+ K
Sbjct: 283 SAGVDKTTIIWDAHTGE--AKQQFPFHSAPALDVDWQSN--NTFASCSTDMCIHVC---K 335
Query: 272 LTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
L D PI F+GH+ V ++W P ++ S ++D L IW
Sbjct: 336 LGQD---RPIKTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIW 376
Score = 54 (24.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 142 QDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVE--- 198
Q + LA + +A + A+ N + ++K+G N E+ GA H D +E
Sbjct: 97 QAYRDKLAQQQAAAAAAAAAATNQQGSAKNGENTANGEEN---GAHTIANNHTDMMEVDG 153
Query: 199 DVQFCPSSA 207
DV+ P+ A
Sbjct: 154 DVEIPPNKA 162
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH V V F P + + S D + LW R+G A + H ++ V W+ D
Sbjct: 358 GHMQLVNQVVFSPDT-RYIASASFDKSVKLWCGRTGKYLASL--RGHVGPVYQVAWSA-D 413
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
L+++GSAD+++ +F+ + S + GH V V WSP+ + V S +D
Sbjct: 414 SRLLVSGSADSTLKVFELK------TKSLYYDLPGHGDEVFTVDWSPEGTKVV-SGGKDK 466
Query: 312 ILNIW 316
+L +W
Sbjct: 467 VLKLW 471
>UNIPROTKB|E1C4X5 [details] [associations]
symbol:WDTC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0004857 "enzyme inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006006 "glucose metabolic
process" evidence=IEA] [GO:0008361 "regulation of cell size"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0045717
"negative regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0055082 "cellular chemical homeostasis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 GO:GO:0006006
GO:GO:0008361 GO:GO:0000122 GO:GO:0045717 Gene3D:1.25.40.10
GeneTree:ENSGT00530000062951 OMA:HRYCGHC GO:GO:0055082
EMBL:AADN02051275 IPI:IPI00603574 ProteinModelPortal:E1C4X5
PRIDE:E1C4X5 Ensembl:ENSGALT00000001392 NextBio:20822612
Uniprot:E1C4X5
Length = 671
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 184 IGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIH 243
+G + GH V +++ S DD I+WD + + H A+I
Sbjct: 37 LGLEAELQGHSGCVNCLEW-NEKGDLLASGSDDQHTIVWDPLHHKK-LLSMHTGHTANIF 94
Query: 244 CVDWNPHDVNLIL-TGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSS 302
V + PH + IL TG+AD+ +H+ D LT V IH F H+ V + +P +
Sbjct: 95 SVKFLPHSGDRILITGAADSKVHVHD---LT---VKETIHMFGDHTNRVKRIATAPMWPN 148
Query: 303 VFGSSAEDGILNIWD 317
F S+AEDG++ +D
Sbjct: 149 TFWSAAEDGLIRQYD 163
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 190 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADI-HCVDWN 248
++GH V DV F S Q F S D + LWD+ +G + + N + +CV +N
Sbjct: 327 FIGHSKAVRDVCFNNSGTQ-FLSAAYDRYIKLWDSETGQC----ISRFTNRKVPYCVKFN 381
Query: 249 PHD--VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGS 306
P + NL++ G +D I +D R G + +++ H AV + + D++ F S
Sbjct: 382 PDEDKQNLLVAGMSDKKIVQWDIRS------GEVVQEYDRHLGAVNTITFV-DENRRFVS 434
Query: 307 SAEDGILNIWD 317
+++D L +W+
Sbjct: 435 TSDDKSLRVWE 445
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/127 (26%), Positives = 57/127 (44%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPA-VKVEKAHNADIHCVDWNPH 250
GH + V V + A E CS D + LWDA +G + + K N C+ ++P
Sbjct: 254 GHNEAVSSVLWM--DADELCSASWDHTIRLWDAETGGQKSTLSGSKVFN----CISYSPL 307
Query: 251 DVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAED 310
+ +GS D + ++D R + DG + H+ V V+W+P S + D
Sbjct: 308 -CRRLASGSTDRHVRLWDPR--SKDG-SLVLLSLTSHNGWVTAVRWAPSHEHQLVSGSLD 363
Query: 311 GILNIWD 317
++ +WD
Sbjct: 364 NVVKLWD 370
>UNIPROTKB|F1PFU7 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016558 "protein import into peroxisome
matrix" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558
GO:GO:0005053 PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352
OMA:HALYDSR EMBL:AAEX03004674 Ensembl:ENSCAFT00000031193
Uniprot:F1PFU7
Length = 705
Score = 133 (51.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 40/142 (28%), Positives = 62/142 (43%)
Query: 178 PLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKA 237
P SPSI G ++V DVQF F S ++ + LWD R ++ A
Sbjct: 64 PSPSPSIDVLST--GQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDR-CERMFTA 120
Query: 238 HNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWS 297
HN + C DW+P D + TG D + ++D +T+ +H + A+V V+W
Sbjct: 121 HNGPVFCCDWHPEDRGWLATGGRDKMVKVWD---MTTHRA-KEVHCVQT-IASVARVKWR 175
Query: 298 PDKSSVFG--SSAEDGILNIWD 317
P+ S D + +WD
Sbjct: 176 PECRHHLATCSMMVDHNIYVWD 197
>RGD|1598329 [details] [associations]
symbol:Sec31b "SEC31 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0044432 "endoplasmic reticulum part"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1598329 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 KO:K14005
GeneTree:ENSGT00390000003175 CTD:25956 OrthoDB:EOG470TGM
EMBL:AC103018 IPI:IPI00554203 RefSeq:NP_001129185.1
UniGene:Rn.45161 ProteinModelPortal:D4ADQ9
Ensembl:ENSRNOT00000035758 GeneID:309433 KEGG:rno:309433
UCSC:RGD:1598329 NextBio:660758 Uniprot:D4ADQ9
Length = 1179
Score = 124 (48.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 34/107 (31%), Positives = 56/107 (52%)
Query: 211 CSVGDDSCLI-LWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDR 269
CS D +I LWD R S+P +KV ++H+ I V W+ D L+L+ + DN I ++
Sbjct: 232 CSEDDRLPVIQLWDLRFASSP-LKVLESHSRGILSVSWSQADAELLLSSAKDNQIFCWN- 289
Query: 270 RKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
L+S V ++K S+ VQW P F + + DG ++++
Sbjct: 290 --LSSSEV---VYKLPTQSSWCFDVQWCPRNPPAFSAVSFDGWISLY 331
Score = 113 (44.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 28/100 (28%), Positives = 48/100 (48%)
Query: 220 ILWDARSGSTPAVKVEKAHNADIHC--VDWNPHDVNLILTGSADNSIHMFDRRKLTSDGV 277
++WD R P +KV H++ ++C + WNP ++ S D+ + + L
Sbjct: 194 VVWDLRKNE-PIIKVSD-HSSRMNCSGLAWNPDIATQLVLCSEDDRLPVIQLWDLRF--A 249
Query: 278 GSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
SP+ E HS +L V WS + + SSA+D + W+
Sbjct: 250 SSPLKVLESHSRGILSVSWSQADAELLLSSAKDNQIFCWN 289
Score = 59 (25.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 82 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLDQSVVLWSI 141
H G V + P ++A+ ++ IWD+ G+ +P D + W+
Sbjct: 120 HTGAVRALDFNPFQGNLLASGASDSEIFIWDLN-HLTVPMTPGSKSQNPPEDIKALSWNR 178
Query: 142 Q-DHVSALAAEPGSA 155
Q H+ + A G A
Sbjct: 179 QVQHILSSAHPSGKA 193
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 35/125 (28%), Positives = 60/125 (48%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH+ + V F P + F S D + LWD +SG + + H ++ V W+ D
Sbjct: 392 GHQQLINLVSFSPDG-RYFASASFDKSIKLWDGQSGKF--LGNFRGHVGAVYQVCWSS-D 447
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 311
+++GS D+++ ++D + + + GH+ V V WSPD V S ++D
Sbjct: 448 SRYLVSGSKDSTLKIWDIKTKKME------KELPGHADEVYTVDWSPDGDRV-ASGSKDR 500
Query: 312 ILNIW 316
+L IW
Sbjct: 501 LLRIW 505
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 39/132 (29%), Positives = 62/132 (46%)
Query: 192 GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHD 251
GH + V + F P + F SVG D+ + +WD + STP + K H + V W+P D
Sbjct: 138 GHTEAVLNCAFSPDG-KGFVSVGGDTTVRIWDIYT-STPTHTL-KGHTNWVLQVAWSP-D 193
Query: 252 VNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSP----DKSSVFGSS 307
I T + I ++ + T +GS + +GH+ + + W P K SS
Sbjct: 194 SKKIATAGMEGDIRIWCPQ--TGKQLGSTL---KGHTKFITGLSWEPFHLNPKCVRLASS 248
Query: 308 AEDGILNIWDHE 319
++D + IWD E
Sbjct: 249 SKDSTIRIWDTE 260
Score = 119 (46.9 bits), Expect = 0.00046, P = 0.00046
Identities = 65/240 (27%), Positives = 92/240 (38%)
Query: 95 NSKIVATHTDSPD--VLIWDVEAQPNRHAVLGAADSHPDLD---QSVVLWSIQDH-VSAL 148
N K V + S D + IWD E+ N ++ G S L + ++ QD V
Sbjct: 239 NPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVRVF 298
Query: 149 AAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQF------ 202
G G A+ N N D L + S GK DT+E+ Q
Sbjct: 299 NTTDGRLVRVLDGHAHWVNTLAL--NTDYVLRTGSYDHTGK---EYDTLEEAQRVALERY 353
Query: 203 ----CPSSAQEFCSVG-DDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILT 257
S E G DD +I+W+ T ++ H I+ V ++P D +
Sbjct: 354 NDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLT-GHQQLINLVSFSP-DGRYFAS 411
Query: 258 GSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWD 317
S D SI ++D + G + F GH AV V WS D S S ++D L IWD
Sbjct: 412 ASFDKSIKLWDGQS------GKFLGNFRGHVGAVYQVCWSSD-SRYLVSGSKDSTLKIWD 464
>ZFIN|ZDB-GENE-041010-167 [details] [associations]
symbol:tssc1 "tumor suppressing subtransferable
candidate 1" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-041010-167 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG314403
HOGENOM:HOG000264967 EMBL:BC083257 IPI:IPI00507270
RefSeq:NP_001006065.1 UniGene:Dr.108122 ProteinModelPortal:Q5XJP1
PRIDE:Q5XJP1 GeneID:450045 KEGG:dre:450045 CTD:7260
HOVERGEN:HBG052937 InParanoid:Q5XJP1 OrthoDB:EOG4C5CJP
NextBio:20833026 ArrayExpress:Q5XJP1 Uniprot:Q5XJP1
Length = 387
Score = 117 (46.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 46/178 (25%), Positives = 77/178 (43%)
Query: 109 LIWDVEAQPNRHAVLGAADSHP---DLDQSVVLWSIQDHVSALAAEPGSAKSTASGGANS 165
++W+ R V+ A++H DL +S +I SA G K TA +
Sbjct: 140 VLWEPMGDGKR--VISLAENHVLLWDLQESSAKATISS--SATLEGKGQLKFTAGKWSPH 195
Query: 166 KNASKSGGNGDKPLESPSIGARGK-YL---GHEDTVEDVQFCPSSAQEFCSVGDDSCLIL 221
N ++ D + + + + Y H V D+ F P+ S GDD +
Sbjct: 196 HNCTQLATANDTAIRGWDLRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKF 255
Query: 222 WDARSGSTPAVKVEKAHNADIHCVDWN-PHDVNLILTGSADNSIHMFDRRKLTSDGVG 278
WD R S P VK + H+ + V +N HD L+LT S+D+ + + + ++S+ G
Sbjct: 256 WDVRHISEP-VKCLEEHSHWVWSVRYNHSHD-QLLLTASSDSRVILSNMVSISSEPFG 311
Score = 54 (24.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 279 SPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNI 315
S I +E H +V V+WS +F S + DG L I
Sbjct: 338 SIISTYEEHEDSVYAVEWSAADPWLFASLSYDGRLVI 374
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/133 (29%), Positives = 63/133 (47%)
Query: 195 DTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEK-AHNADIHCVDWNPHDVN 253
DT+ V F + S G D +IL+D R+ S + V K A NA V WNP +
Sbjct: 198 DTITSVAFNQTETSVLASTGIDRSIILYDLRTSSPLSKLVLKLASNA----VSWNPMEAF 253
Query: 254 LILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGIL 313
+ D++++MFD RK+ ++ + H AAV+ V +SP + +S D +
Sbjct: 254 NFAVANEDHNVYMFDMRKMNR-----ALNVLKDHVAAVMDVDFSPTGEELVTASY-DRTI 307
Query: 314 NIWDHEKIGEKQD 326
+W+ G +D
Sbjct: 308 RLWNRAT-GHSRD 319
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 121 (47.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 35/105 (33%), Positives = 50/105 (47%)
Query: 212 SVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRK 271
S G D I+WDA +G A + H+A VDW + N + S D IH+ K
Sbjct: 283 SAGVDKTTIIWDAHTGE--AKQQFPFHSAPALDVDWQSN--NTFASCSTDMCIHVC---K 335
Query: 272 LTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
L D PI F+GH+ V ++W P ++ S ++D L IW
Sbjct: 336 LGQD---RPIKTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIW 376
Score = 53 (23.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 142 QDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVE--- 198
Q + LA + +A + A+ A+ + ++K+G N E+ GA H D +E
Sbjct: 97 QAYRDKLAQQQAAAAAAAAAAASQQGSAKNGENTANGEEN---GAHTIANNHTDMMEVDG 153
Query: 199 DVQFCPSSA 207
DV+ P+ A
Sbjct: 154 DVEIPPNKA 162
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 121 (47.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 35/105 (33%), Positives = 50/105 (47%)
Query: 212 SVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRK 271
S G D I+WDA +G A + H+A VDW + N + S D IH+ K
Sbjct: 283 SAGVDKTTIIWDAHTGE--AKQQFPFHSAPALDVDWQSN--NTFASCSTDMCIHVC---K 335
Query: 272 LTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIW 316
L D PI F+GH+ V ++W P ++ S ++D L IW
Sbjct: 336 LGQD---RPIKTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIW 376
Score = 53 (23.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 142 QDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVE--- 198
Q + LA + +A + A+ N + ++K+G N E+ GA H D +E
Sbjct: 97 QAYRDKLAQQHAAAAAAAAAATNQQGSAKNGENTANGEEN---GAHTIANNHTDMMEVDG 153
Query: 199 DVQFCPSSA 207
DV+ P+ A
Sbjct: 154 DVEIPPNKA 162
WARNING: HSPs involving 265 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 407 407 0.00078 118 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 515
No. of states in DFA: 624 (66 KB)
Total size of DFA: 304 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.11u 0.12s 38.23t Elapsed: 00:00:02
Total cpu time: 38.16u 0.12s 38.28t Elapsed: 00:00:02
Start: Fri May 10 06:05:58 2013 End: Fri May 10 06:06:00 2013
WARNINGS ISSUED: 2