BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046900
(442 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 531 bits (1368), Expect = e-151, Method: Compositional matrix adjust.
Identities = 246/426 (57%), Positives = 319/426 (74%), Gaps = 5/426 (1%)
Query: 14 LSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLEQQP 73
LS+ A +HG+DS YF GW+ Y++NPY E N +G+IQMGLAENQ+ FDLLE +L + P
Sbjct: 2 LSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNP 61
Query: 74 EASTWGK-GAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAA 132
EA+ + K G F E ALFQDYHGL +F++AM FM +IRG + FD N +V+TAGAT+A
Sbjct: 62 EAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSA 121
Query: 133 NELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYK 192
NE F LADPG+A+L+PTPYYPGFDRDL+WRTG++IVPIHC SSN FQIT ALE AY+
Sbjct: 122 NETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQ 181
Query: 193 EAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXX 252
EAE +++RV+GVL+TNPSNPLG T+ R+ L LL F K IHL+SDEIY
Sbjct: 182 EAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSF 241
Query: 253 XXXXXXLEARQYKDS----ERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT 308
L+ R ++ +RVH+VYSLSKDLGLPGFRVG IYS +D VV A +MSSF
Sbjct: 242 ISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG 301
Query: 309 LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWM 368
L+SSQTQ+LL++MLS+KK T+NYI N +RL++R + ++ GL+ +GI CL GNAGLFCW+
Sbjct: 302 LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWV 361
Query: 369 NLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALK 428
++ LL T E E+ LW +++EV LNISPGSSCHC+EPGWFRVCFAN+ E+TL++A++
Sbjct: 362 DMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQ 421
Query: 429 RIHNFM 434
R+ F+
Sbjct: 422 RLKAFV 427
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 531 bits (1368), Expect = e-151, Method: Compositional matrix adjust.
Identities = 246/426 (57%), Positives = 319/426 (74%), Gaps = 5/426 (1%)
Query: 14 LSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLEQQP 73
LS+ A +HG+DS YF GW+ Y++NPY E N +G+IQMGLAENQ+ FDLLE +L + P
Sbjct: 4 LSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNP 63
Query: 74 EASTWGK-GAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAA 132
EA+ + K G F E ALFQDYHGL +F++AM FM +IRG + FD N +V+TAGAT+A
Sbjct: 64 EAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSA 123
Query: 133 NELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYK 192
NE F LADPG+A+L+PTPYYPGFDRDL+WRTG++IVPIHC SSN FQIT ALE AY+
Sbjct: 124 NETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQ 183
Query: 193 EAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXX 252
EAE +++RV+GVL+TNPSNPLG T+ R+ L LL F K IHL+SDEIY
Sbjct: 184 EAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSF 243
Query: 253 XXXXXXLEARQYKDS----ERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT 308
L+ R ++ +RVH+VYSLSKDLGLPGFRVG IYS +D VV A +MSSF
Sbjct: 244 ISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG 303
Query: 309 LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWM 368
L+SSQTQ+LL++MLS+KK T+NYI N +RL++R + ++ GL+ +GI CL GNAGLFCW+
Sbjct: 304 LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWV 363
Query: 369 NLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALK 428
++ LL T E E+ LW +++EV LNISPGSSCHC+EPGWFRVCFAN+ E+TL++A++
Sbjct: 364 DMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQ 423
Query: 429 RIHNFM 434
R+ F+
Sbjct: 424 RLKAFV 429
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 530 bits (1366), Expect = e-151, Method: Compositional matrix adjust.
Identities = 246/426 (57%), Positives = 319/426 (74%), Gaps = 5/426 (1%)
Query: 14 LSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLEQQP 73
LS+ A +HG+DS YF GW+ Y++NPY E N +G+IQMGLAENQ+ FDLLE +L + P
Sbjct: 4 LSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNP 63
Query: 74 EASTWGK-GAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAA 132
EA+ + K G F E ALFQDYHGL +F++AM FM +IRG + FD N +V+TAGAT+A
Sbjct: 64 EAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSA 123
Query: 133 NELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYK 192
NE F LADPG+A+L+PTPYYPGFDRDL+WRTG++IVPIHC SSN FQIT ALE AY+
Sbjct: 124 NETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQ 183
Query: 193 EAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXX 252
EAE +++RV+GVL+TNPSNPLG T+ R+ L LL F K IHL+SDEIY
Sbjct: 184 EAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSF 243
Query: 253 XXXXXXLEARQYKDS----ERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT 308
L+ R ++ +RVH+VYSLSKDLGLPGFRVG IYS +D VV A +MSSF
Sbjct: 244 ISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG 303
Query: 309 LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWM 368
L+SSQTQ+LL++MLS+KK T+NYI N +RL++R + ++ GL+ +GI CL GNAGLFCW+
Sbjct: 304 LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWV 363
Query: 369 NLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALK 428
++ LL T E E+ LW +++EV LNISPGSSCHC+EPGWFRVCFAN+ E+TL++A++
Sbjct: 364 DMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQ 423
Query: 429 RIHNFM 434
R+ F+
Sbjct: 424 RLKAFV 429
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 525 bits (1353), Expect = e-149, Method: Compositional matrix adjust.
Identities = 233/423 (55%), Positives = 316/423 (74%), Gaps = 2/423 (0%)
Query: 14 LSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLEQQP 73
LSK+A +E HGE+SPYF GWKAYD +P+ NP+GVIQMGLAENQ+ DL+E+++++ P
Sbjct: 2 LSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLCLDLIEDWIKRNP 61
Query: 74 EASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAAN 133
+ S +G F+ A FQDYHGL FR+A+A FME+ RGGR +FD R+V+ GAT AN
Sbjct: 62 KGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGAN 121
Query: 134 ELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKE 193
E + F LADPGDA LVP+PYYP F+RDLRWRTG++++PIHC+SSNNF+IT +A++ AY+
Sbjct: 122 ETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYEN 181
Query: 194 AESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXX 253
A+ +++V+G+++TNPSNPLG T+ + L+ +L F + NIHLV DEIY
Sbjct: 182 AQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFV 241
Query: 254 XXXXXLEARQ--YKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLIS 311
L+ ++ Y + + VHIVYSLSKD+GLPGFRVG IYS+ND VV AR+MSSF L+S
Sbjct: 242 SIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVS 301
Query: 312 SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLS 371
+QTQY LA+MLS++KF +N+++ + RL KR++ GL GI+CLK NAGLFCWM+L
Sbjct: 302 TQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLR 361
Query: 372 PLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIH 431
PLL E T + E++LW ++++VKLN+SPGSS C EPGWFRVCFANM + T+++AL RI
Sbjct: 362 PLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIR 421
Query: 432 NFM 434
F+
Sbjct: 422 RFV 424
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 511 bits (1317), Expect = e-145, Method: Compositional matrix adjust.
Identities = 238/408 (58%), Positives = 307/408 (75%), Gaps = 5/408 (1%)
Query: 29 YFAGWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLEQQPEASTWGK-GAPGFRE 87
YF GW+ Y++NPY E N +G+IQMGLAENQ+ FDLLE +L + PEA+ + K G F E
Sbjct: 2 YFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAE 61
Query: 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDAL 147
ALFQDYHGL +F++AM FM +IRG + FD N +V+TAGAT+ANE F LADPG+A+
Sbjct: 62 LALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAV 121
Query: 148 LVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT 207
L+PTPYYPGFDRDL+WRTG++IVPIHC SSN FQIT ALE AY+EAE +++RV+GVL+T
Sbjct: 122 LIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVT 181
Query: 208 NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDS 267
NPSNPLG T+ R+ L LL F K IHL+SDEIY L+ +
Sbjct: 182 NPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDEVW--- 238
Query: 268 ERVHIVYSLS-KDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKK 326
+RVH+VYSLS KDLGLPGFRVG IYS +D VV A +MSSF L+SSQTQ+LL++MLS+KK
Sbjct: 239 QRVHVVYSLSXKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKK 298
Query: 327 FTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALW 386
T+NYI N +RL++R + ++ GL+ +GI CL GNAGLFCW+++ LL T E E+ LW
Sbjct: 299 LTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELW 358
Query: 387 DSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434
+++EV LNISPGSSCHC+EPGWFRVCFAN+ E+TL++A++R+ F+
Sbjct: 359 KKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFV 406
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 169/397 (42%), Gaps = 51/397 (12%)
Query: 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFM 108
GV + L + FD E E A GK + G+ R+A+A
Sbjct: 30 GVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK--------YAPPAGIPELREALA--- 78
Query: 109 EQIR--GGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG 166
E+ R G + IV G+ A L IL DPGD ++V +PY+ + +R+ G
Sbjct: 79 EKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL-DPGDEVIVLSPYWVSYPEMVRFAGG 137
Query: 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELL 226
+ +V + F P+ + A R + +++ +P+NP GA + VLE L
Sbjct: 138 V-VVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALA 190
Query: 227 DFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDS----ERVHIVYSLSKDLGL 282
A + +LVSDEIY E + E V +K +
Sbjct: 191 RLAVEHDFYLVSDEIY------------EHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAM 238
Query: 283 PGFRVGTIYSYNDK-VVTTARRMSSFTLISSQT--QYLLASMLSNKKFTENYIKTNRERL 339
G+R+G Y+ K V+ +SS + S T Q+ L+N++ + +++ RE
Sbjct: 239 TGWRIG--YACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAY 296
Query: 340 QKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISP 399
++R +++EGL + G++ ++ + + M+ SP+ ++ R E L E + + P
Sbjct: 297 RRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAE------RLLEAGVAVVP 350
Query: 400 GSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436
G+ G R+ +A SE+ L AL+R + +
Sbjct: 351 GTDFAAF--GHVRLSYAT-SEENLRKALERFARVLGR 384
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 168/397 (42%), Gaps = 51/397 (12%)
Query: 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFM 108
GV + L + FD E E A GK + G+ R+A+A
Sbjct: 30 GVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK--------YAPPAGIPELREALA--- 78
Query: 109 EQIR--GGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG 166
E+ R G + IV G A L IL DPGD ++V +PY+ + +R+ G
Sbjct: 79 EKFRRENGLSVTPEETIVTVGGKQALFNLFQAIL-DPGDEVIVLSPYWVSYPEMVRFAGG 137
Query: 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELL 226
+ +V + F P+ + A R + +++ +P+NP GA + VLE L
Sbjct: 138 V-VVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALA 190
Query: 227 DFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDS----ERVHIVYSLSKDLGL 282
A + +LVSDEIY E + E V +K +
Sbjct: 191 RLAVEHDFYLVSDEIY------------EHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAM 238
Query: 283 PGFRVGTIYSYNDK-VVTTARRMSSFTLISSQT--QYLLASMLSNKKFTENYIKTNRERL 339
G+R+G Y+ K V+ +SS + S T Q+ L+N++ + +++ RE
Sbjct: 239 TGWRIG--YACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAY 296
Query: 340 QKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISP 399
++R +++EGL + G++ ++ + + M+ SP+ ++ R E L E + + P
Sbjct: 297 RRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAE------RLLEAGVAVVP 350
Query: 400 GSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436
G+ G R+ +A SE+ L AL+R + +
Sbjct: 351 GTDFAAF--GHVRLSYAT-SEENLRKALERFARVLGR 384
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 170/399 (42%), Gaps = 55/399 (13%)
Query: 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFM 108
GV + L + FD E E A GK + G+ R+A+A
Sbjct: 30 GVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK--------YAPPAGIPELREALA--- 78
Query: 109 EQIR--GGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG 166
E+ R G + IV G+ A L IL DPGD ++V +PY+ + +R+ G
Sbjct: 79 EKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL-DPGDEVIVLSPYWVSYPEMVRFAGG 137
Query: 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELL 226
+ +V + F P+ + A R + +++ +P+NP GA + VLE L
Sbjct: 138 V-VVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALA 190
Query: 227 DFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDS----ERVHIVYSLSKDLGL 282
A + +LVSDEIY E + E V +K +
Sbjct: 191 RLAVEHDFYLVSDEIY------------EHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAM 238
Query: 283 PGFRVGTIYSYNDKVVTTARRMSSFTLISSQT-----QYLLASMLSNKKFTENYIKTNRE 337
G+R+G Y+ K V A M+S + S+ + Q+ L+N++ + +++ RE
Sbjct: 239 TGWRIG--YACGPKEVIKA--MASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMARE 294
Query: 338 RLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNI 397
++R +++EGL + G++ ++ + + M+ SP+ ++ R E L E + +
Sbjct: 295 AYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAE------RLLEAGVAV 348
Query: 398 SPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436
PG+ G R+ +A SE+ L AL+R + +
Sbjct: 349 VPGTDFAAF--GHVRLSYAT-SEENLRKALERFARVLGR 384
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 170/399 (42%), Gaps = 55/399 (13%)
Query: 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFM 108
GV + L + FD E E A GK + G+ R+A+A
Sbjct: 30 GVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK--------YAPPAGIPELREALA--- 78
Query: 109 EQIR--GGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG 166
E+ R G + IV G+ A L IL DPGD ++V +PY+ + +R+ G
Sbjct: 79 EKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL-DPGDEVIVLSPYWVSYPEMVRFAGG 137
Query: 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELL 226
+ +V + F P+ + A R + +++ +P+NP GA + VLE L
Sbjct: 138 V-VVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALA 190
Query: 227 DFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDS----ERVHIVYSLSKDLGL 282
A + +LVSDEIY E + E V +K +
Sbjct: 191 RLAVEHDFYLVSDEIY------------EHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAM 238
Query: 283 PGFRVGTIYSYNDKVVTTARRMSSFTLISSQT-----QYLLASMLSNKKFTENYIKTNRE 337
G+R+G Y+ K V A M+S + S+ + Q+ L+N++ + +++ RE
Sbjct: 239 TGWRIG--YACGPKEVIKA--MASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMARE 294
Query: 338 RLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNI 397
++R +++EGL + G++ ++ + + M+ SP+ ++ R E L E + +
Sbjct: 295 AYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAE------RLLEAGVAV 348
Query: 398 SPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436
PG+ G R+ +A SE+ L AL+R + +
Sbjct: 349 VPGTDFAAF--GHVRLSYAT-SEENLRKALERFARVLGR 384
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 170/399 (42%), Gaps = 55/399 (13%)
Query: 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFM 108
GV + L + FD E E A GK + G+ R+A+A
Sbjct: 30 GVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK--------YAPPAGIPELREALA--- 78
Query: 109 EQIR--GGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG 166
E+ R G + IV G+ A L IL DPGD ++V +PY+ + +R+ G
Sbjct: 79 EKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL-DPGDEVIVLSPYWVSYPEMVRFAGG 137
Query: 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELL 226
+ +V + F P+ + A R + +++ +P+NP GA + VLE L
Sbjct: 138 V-VVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALA 190
Query: 227 DFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDS----ERVHIVYSLSKDLGL 282
A + +LVSDEIY E + E V +K +
Sbjct: 191 RLAVEHDFYLVSDEIY------------EHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAM 238
Query: 283 PGFRVGTIYSYNDKVVTTARRMSSFTLISSQT-----QYLLASMLSNKKFTENYIKTNRE 337
G+R+G Y+ K V A M+S + S+ + Q+ L+N++ + +++ RE
Sbjct: 239 TGWRIG--YACGPKEVIKA--MASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMARE 294
Query: 338 RLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNI 397
++R +++EGL + G++ ++ + + M+ SP+ ++ R E L E + +
Sbjct: 295 AYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAE------RLLEAGVAV 348
Query: 398 SPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436
PG+ G R+ +A SE+ L AL+R + +
Sbjct: 349 VPGTDFAAF--GHVRLSYAT-SEENLRKALERFARVLGR 384
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 162/353 (45%), Gaps = 43/353 (12%)
Query: 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDL--NRIVVTAGATAANELLTFILADPGDALL 148
+ D G+ R+ +A + G R K D+ +++VVT GA A L DPGD ++
Sbjct: 74 YTDPRGIYELREGIAKRI----GERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVI 129
Query: 149 VPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITN 208
V +P + + + G V + S NFQ + + +E + + VLI +
Sbjct: 130 VFSPVWVSYIPQIILAGGTVNV-VETFMSKNFQPSLEEVEGLLVG------KTKAVLINS 182
Query: 209 PSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSE 268
P+NP G +R LE L+ A ++N +++SDE+Y L+ + D
Sbjct: 183 PNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVY----DSLVYTDEFTSILDVSEGFD-- 236
Query: 269 RVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT--LISSQTQY--LLASMLSN 324
R+ + SK + G+RVG + S ++KV T ++ S T I++ QY L A + N
Sbjct: 237 RIVYINGFSKSHSMTGWRVGYLIS-SEKVATAVSKIQSHTTSCINTVAQYAALKALEVDN 295
Query: 325 KKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELA 384
+ + ++R ++E L+ G++ ++ + + + R ++
Sbjct: 296 SYMVQTF--------KERKNFVVERLKKMGVKFVEPEGAFYLFF--------KVRGDDVK 339
Query: 385 LWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437
+ +L E K+ + PGS+ +PG+ R+ FA E+ E AL RI +F+ R
Sbjct: 340 FCERLLEEKKVALVPGSAFL--KPGFVRLSFATSIERLTE-ALDRIEDFLNSR 389
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 171/396 (43%), Gaps = 53/396 (13%)
Query: 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFM 108
GV + L + FD E E A GK + G+ R+A+A
Sbjct: 30 GVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK--------YAPPAGIPELREALA--- 78
Query: 109 EQIR--GGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG 166
E+ R G + IV G A L IL DPGD ++V +PY+ + +R+ G
Sbjct: 79 EKFRRENGLSVTPEETIVTVGGKQALFNLFQAIL-DPGDEVIVLSPYWVSYPEMVRFAGG 137
Query: 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELL 226
+ +V + F P+ + A R + +++ +P+NP GA + VLE L
Sbjct: 138 V-VVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALA 190
Query: 227 DFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKD-----LG 281
A + +LVSDEIY L ++ RV ++L+ +
Sbjct: 191 RLAVEHDFYLVSDEIY-------------EHLLYEGEHFSPGRVAPEHTLTVNGAAXAFA 237
Query: 282 LPGFRVGTIYSYNDK-VVTTARRMSSFTLISSQT--QYLLASMLSNKKFTENYIKTNRER 338
+ G+R+G Y+ K V+ +SS + S T Q+ L+N++ + +++ RE
Sbjct: 238 MTGWRIG--YACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREA 295
Query: 339 LQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNIS 398
++R +++EGL + G++ ++ + + M+ SP+ ++ R E L E + +
Sbjct: 296 YRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAE------RLLEAGVAVV 349
Query: 399 PGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434
PG+ G R+ +A SE+ L AL+R +
Sbjct: 350 PGTDFAAF--GHVRLSYAT-SEENLRKALERFARVL 382
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 142/330 (43%), Gaps = 37/330 (11%)
Query: 40 PYEESTNPSGV----IQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYH 95
P+ E GV + +G + + E E +PE + A
Sbjct: 33 PFAEXAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYSHSA------------- 79
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYP 155
G+ R+A AS+ + R R ++VT G + A ++A+PGD +LV P+Y
Sbjct: 80 GIWELREAFASYYK--RRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYA 137
Query: 156 GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGA 215
++ + G+K++P+ F I PQ LE+ E R +G++++NP NP G
Sbjct: 138 NYNAFAKI-AGVKLIPVTRRXEEGFAI-PQNLESFINE------RTKGIVLSNPCNPTGV 189
Query: 216 TIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYS 275
+ L++ A R + L+ DE+Y +S++V ++ S
Sbjct: 190 VYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSI--------ESDKVVVIDS 241
Query: 276 LSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTN 335
+S G RVG + + N+++++ A +++ L + + + L N +++
Sbjct: 242 VSXKFSACGARVGCLITRNEELISHAXKLAQGRLAPPLLEQIGSVGLLN--LDDSFFDFV 299
Query: 336 RERLQKRYQMIIEGLRSAGIECLKGNAGLF 365
RE ++R + +++ L G++ +G F
Sbjct: 300 RETYRERVETVLKKLEEHGLKRFTKPSGAF 329
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 156/354 (44%), Gaps = 53/354 (14%)
Query: 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDL--NRIVVTAGATAANELLTFILADPGDALL 148
+ D G+ R+ ++ + + K D+ + I++T G++ + D GD +L
Sbjct: 62 YTDSRGILELREKISELYKD----KYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVL 117
Query: 149 VPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITN 208
+ P YP + +R+ G K P+ CD T ++LE A + + + ++I +
Sbjct: 118 IQNPCYPCYKNFIRF-LGAK--PVFCD------FTVESLEEALSD------KTKAIIINS 162
Query: 209 PSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQY---- 264
PSNPLG I R E+ +FA +++SDEIY E + Y
Sbjct: 163 PSNPLGEVIDR----EIYEFAYENIPYIISDEIY------------NGLVYEGKCYSAIE 206
Query: 265 --KDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASML 322
++ E+ ++ S + G+R+G + S ND+++ ++ IS+ T A++
Sbjct: 207 FDENLEKTILINGFSXLYAMTGWRIGYVIS-NDEIIEAILKLQQNLFISAPTISQYAALK 265
Query: 323 SNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGE 382
+ +K TE I + + +R +++++ ++ G E + + N+ E RE
Sbjct: 266 AFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIG----EDGREFA 321
Query: 383 LALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436
L L E + ++PG + R+ +AN E E L+RI F+ K
Sbjct: 322 YKL----LKEKFVALTPGIGFGSKGKNYIRISYANSYENIKE-GLERIKEFLNK 370
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 174/401 (43%), Gaps = 53/401 (13%)
Query: 50 VIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFME 109
VI +G+ E FD + E EA KG + N GL R+A+A ++
Sbjct: 27 VISLGIGEPD--FDTPQHIKEYAKEA--LDKGLTHYGPNI------GLLELREAIAEKLK 76
Query: 110 QIRGGRAKFDLNRIVVTAGATAANEL-LTFILADPGDALLVPTPYYPGFDRDLRWRTGIK 168
+ G A I+V GA A + L+ L D G+ +L+PTP + + + G K
Sbjct: 77 KQNGIEAD-PKTEIMVLLGANQAFLMGLSAFLKD-GEEVLIPTPAFVSYAPAVILAGG-K 133
Query: 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDF 228
V + + F++ L+ + + R ++I +P NP GA + + LEE+ DF
Sbjct: 134 PVEVPTYEEDEFRLNVDELKKYVTD------KTRALIINSPCNPTGAVLTKKDLEEIADF 187
Query: 229 ATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDS------ERVHIVYSLSKDLGL 282
++ ++SDE+Y +AR Y + ER V SK +
Sbjct: 188 VVEHDLIVISDEVYEHFIYD-----------DARHYSIASLDGMFERTITVNGFSKTFAM 236
Query: 283 PGFRVGTIYSYNDKVVTTARRMSSFTLISSQ-----TQYLLASMLSNKKFTENYIKTNRE 337
G+R+G + + + RM F + ++ QY A L +++ + ++ R+
Sbjct: 237 TGWRLGFVAAPS----WIIERMVKFQMYNATCPVTFIQYAAAKALKDER-SWKAVEEMRK 291
Query: 338 RLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNI 397
+R +++ + L G+ +K + + + + EL ML E ++ +
Sbjct: 292 EYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSEL-----MLKEARVAV 346
Query: 398 SPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRE 438
PGS+ + G+ R+ +A E+ LE A++R+ +++R+
Sbjct: 347 VPGSAFGKAGEGYVRISYATAYEK-LEEAMERMERVLKERK 386
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 173/401 (43%), Gaps = 53/401 (13%)
Query: 50 VIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFME 109
VI +G+ E FD + E EA KG + N GL R+A+A ++
Sbjct: 28 VISLGIGEPD--FDTPQHIKEYAKEA--LDKGLTHYGPNI------GLLELREAIAEKLK 77
Query: 110 QIRGGRAKFDLNRIVVTAGATAANEL-LTFILADPGDALLVPTPYYPGFDRDLRWRTGIK 168
+ G A I+V GA A + L+ L D G+ +L+PTP + + + G K
Sbjct: 78 KQNGIEAD-PKTEIMVLLGANQAFLMGLSAFLKD-GEEVLIPTPAFVSYAPAVILAGG-K 134
Query: 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDF 228
V + + F++ L+ + + R ++I +P NP GA + + LEE+ DF
Sbjct: 135 PVEVPTYEEDEFRLNVDELKKYVTD------KTRALIINSPCNPTGAVLTKKDLEEIADF 188
Query: 229 ATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDS------ERVHIVYSLSKDLGL 282
++ ++SDE+Y +AR Y + ER V SK +
Sbjct: 189 VVEHDLIVISDEVYEHFIYD-----------DARHYSIASLDGMFERTITVNGFSKTFAM 237
Query: 283 PGFRVGTIYSYNDKVVTTARRMSSFTLISSQ-----TQYLLASMLSNKKFTENYIKTNRE 337
G+R+G + + + RM F + ++ QY A L +++ + ++ R+
Sbjct: 238 TGWRLGFVAAPS----WIIERMVKFQMYNATCPVTFIQYAAAKALKDER-SWKAVEEMRK 292
Query: 338 RLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNI 397
+R +++ + L G+ +K + + + + EL ML E ++ +
Sbjct: 293 EYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSEL-----MLKEARVAV 347
Query: 398 SPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRE 438
PGS+ + G+ R+ +A E+ LE A+ R+ +++R+
Sbjct: 348 VPGSAFGKAGEGYVRISYATAYEK-LEEAMDRMERVLKERK 387
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 142/354 (40%), Gaps = 31/354 (8%)
Query: 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVP 150
+ D GL R+A+ + R + + VTA T A +L+ L DPGD +LVP
Sbjct: 74 YGDSEGLPELRKAIVE--REKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVP 131
Query: 151 TPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPS 210
P YP + +++ G P+ + P + K + R + + + NP+
Sbjct: 132 GPSYPPYTGLVKFYGG---KPVEYRTIEEEDWQPDIDDIRKKITD----RTKAIAVINPN 184
Query: 211 NPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERV 270
NP GA + LEE+L+ A I ++SDEIY + V
Sbjct: 185 NPTGALYDKKTLEEILNIAGEYEIPVISDEIY-------DLMTYEGEHISPGSLTKDVPV 237
Query: 271 HIVYSLSKDLGLPGFRVGTIYSYN-----DKVVTTARRMSSFTLI-SSQTQY-LLASMLS 323
++ LSK G+R+G +Y + +V R++ L ++ Q+ +A +
Sbjct: 238 IVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTG 297
Query: 324 NKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGEL 383
+ + Y+K +ER Y+ + E GI K + + P +E + +
Sbjct: 298 PMDYLKEYMKKLKERRDYIYKRLNE---IPGISTTKPQGAFYIF----PKIEVGPWKNDK 350
Query: 384 ALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437
+LH + GS G FR F E LE A+ R FM++R
Sbjct: 351 EFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIE-ILEEAMDRFEKFMKER 403
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 146/342 (42%), Gaps = 46/342 (13%)
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYP 155
GL + R+A+A E+ + +VVT+GAT A +L L PGD ++V P++
Sbjct: 62 GLPALREALA---EEF-----AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFD 113
Query: 156 GFDRDLRWRTGIKIVPIHCD-SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLG 214
+ D + G K + D + F++ ALE A R R +L+ P NP G
Sbjct: 114 VYLPDA-FLAGAKARLVRLDLTPEGFRLDLSALEKALTP------RTRALLLNTPMNPTG 166
Query: 215 ATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVY 274
LE + A ++ L+SDE+Y R++ ER V
Sbjct: 167 LVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRL-------REFA-PERTFTVG 218
Query: 275 SLSKDLGLPGFRVGTIYSYNDKVVTTA--RRMSSFTLISSQTQYLLASMLSNKKFTENYI 332
S K L G+RVG I + + A R+ +SF+ + Q +A L + E +
Sbjct: 219 SAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFS-APTPLQAGVAEALKLAR-REGFY 276
Query: 333 KTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDS--ML 390
+ RE ++R ++ GLR+ G+ F EL WD+ ++
Sbjct: 277 EALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLM-------------AELPGWDAFRLV 323
Query: 391 HEVKLNISPGSSCHCSEP--GWFRVCFANMSEQTLEVALKRI 430
E ++ + P S+ + +P FR F +E+ L +AL+R+
Sbjct: 324 EEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERL 364
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 134/332 (40%), Gaps = 53/332 (15%)
Query: 101 RQAMASFMEQIRGGRAKFDLNRIVVTAGATAANEL-LTFILADPGDALLVPTPYYPGFDR 159
R A+A F+ G F+ + + T GA A+ + + +D D + PY+P + +
Sbjct: 82 RAAIAEFLNNTHG--THFNADNLYXTXGAAASLSICFRALTSDAYDEFITIAPYFPEY-K 138
Query: 160 DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQR 219
G ++V + D+ + FQI ALE E + RGV+I +P+NP G
Sbjct: 139 VFVNAAGARLVEVPADTEH-FQIDFDALE------ERINAHTRGVIINSPNNPSGTVYSE 191
Query: 220 SVLEELLDFATRKN------IHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIV 273
+++L D +K+ I +++DE Y +Y D+ V
Sbjct: 192 ETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPF------VTKYYDNTLV--C 243
Query: 274 YSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTE---- 329
YS SK L LPG R+G + D+V A ++ Y+ A L K +
Sbjct: 244 YSYSKSLSLPGERIGYVLV-PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKXIVKCQGA 302
Query: 330 ----NYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELAL 385
N K NR+ ++ EGL G C K + + ++ LE+ + A
Sbjct: 303 TGDINAYKENRD-------LLYEGLTRIGYHCFKPDGAFYXFVK---ALEDDSN----AF 348
Query: 386 WDSMLHE-VKLNISPGSSCHCSEPGWFRVCFA 416
+ E V + + G C PGW R+ +
Sbjct: 349 CEKAKEEDVLIVAADGFGC----PGWVRISYC 376
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 175/386 (45%), Gaps = 48/386 (12%)
Query: 63 DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNR 122
++ +E LE++P++ ++ +G+ R+ +A+F+++ +
Sbjct: 56 EIAKEVLEKEPKS-------------VMYTPANGIPELREELAAFLKKYD--HLEVSPEN 100
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW-RTGIKI--VPIHCDSSNN 179
IV+T G T A +LL +L DPGD ++ P Y + L + + G KI VP+ D
Sbjct: 101 IVITIGGTGALDLLGRVLIDPGDVVITENPSY--INTLLAFEQLGAKIEGVPVDNDG--- 155
Query: 180 FQITPQALEAAYKEAESKDMRVRGVLITNPS--NPLGATIQRSVLEELLDFATRKNIHLV 237
+ LE KE ++K +V+ ++ T P+ NP+G T+ + LL+ A++ ++ ++
Sbjct: 156 --MRVDLLEEKIKELKAKGQKVK-LIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLII 212
Query: 238 SDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYND-- 295
D Y + + + RV + +LSK LG GFR+G I + +
Sbjct: 213 EDTAY------NFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGT-GFRIGWIIAEGEIL 265
Query: 296 KVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS--A 353
K V ++ F + +QY+ L F + +++ +++ ++++ L +
Sbjct: 266 KKVLMQKQPIDFC-APAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLP 324
Query: 354 GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPG--WF 411
E K AG+F L + +G ++ + ++ + + PG + E G
Sbjct: 325 NAEFTKPIAGMFVMFFLP-----EGADG-ISFANELMEREGVVVVPGKPFYTDESGKNAI 378
Query: 412 RVCFANMSEQTLEVALKRIHNFMQKR 437
R+ F+ S++ + + +K++ +++
Sbjct: 379 RLNFSRPSKEEIPIGIKKLAKLYKEK 404
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 131/317 (41%), Gaps = 53/317 (16%)
Query: 83 PGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLT-FILA 141
PG R + G+ R A+AS + G A D I +T GA+ L+ ++
Sbjct: 123 PG-RATGAYSHSQGIHGLRDAIASGIASRDGFPANAD--DIFLTDGASPGVHLMMQLLIR 179
Query: 142 DPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201
+ D +LVP P YP + + G +VP + + S + + ++ ++A S+ + V
Sbjct: 180 NEKDGILVPIPQYPLYSASIALHGG-ALVPYYLNESTGWGLETSDVKKQLEDARSRGINV 238
Query: 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEA 261
R +++ NP NP G + +++ F + + L++DE+Y +
Sbjct: 239 RALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVY-----------------QE 281
Query: 262 RQYKDSERVHIVYSLSKDLG-----LP---------------GFRVG--TIYSYNDKVVT 299
Y D+++ H + + LG LP G R G I ++ V
Sbjct: 282 NIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVRE 341
Query: 300 TARRMSSFTLISSQTQYLLASMLSN--KKFTENYIKTNRER------LQKRYQMIIEGL- 350
+++S L S+ T +LAS++ N K E+Y E+ L +R + +
Sbjct: 342 QIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFN 401
Query: 351 RSAGIECLKGNAGLFCW 367
+ GI C + ++ +
Sbjct: 402 KLEGITCNEAEGAMYVF 418
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 139/346 (40%), Gaps = 36/346 (10%)
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYP 155
GL + RQ +A + G D R+V+T G++ L L D GD + + P YP
Sbjct: 69 GLPALRQRIARLYGEWYG--VDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYP 126
Query: 156 GFDRDLRWRTGIKIVPIHCDSS--NNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPL 213
+ + LR + +VP+ ++ N Q P A+ + + G+ + +P+NP
Sbjct: 127 SYRQILR---ALGLVPVDLPTAPENRLQPVP---------ADFAGLDLAGLXVASPANPT 174
Query: 214 GATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIV 273
G + + L++ A + +SDEIY ++ +++
Sbjct: 175 GTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL---------TDECYVI 225
Query: 274 YSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIK 333
S SK G+RVG D+ V R++ I + +A++ + E ++
Sbjct: 226 NSFSKYFSXTGWRVGWXVVPEDQ-VRVVERIAQNXFICAPHASQVAALAALDCDAE--LQ 282
Query: 334 TNRERLQKRYQMIIEGLRSAGIECLKGNAGLF-CWMNLSPLLEEQTREGELALWDSMLHE 392
N + + ++ +E L AG + G F + ++S L ++ A +L +
Sbjct: 283 ANLDVYKANRKLXLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSR-----AFAAEILEK 337
Query: 393 VKLNISPGSSCHCSE-PGWFRVCFANMSEQTLEVALKRIHNFMQKR 437
+ ++PG G R +A + +E L R+ F Q R
Sbjct: 338 AGVAVTPGLDFDPERGAGTLRFSYARATAD-IEEGLDRLEAFXQAR 382
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYP 155
G S R+ +AS+ A + +++T+G + A EL +LA+PG +L+P P +
Sbjct: 74 GYLSSREEVASYY---HCPEAPLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFS 130
Query: 156 GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGA 215
+ R L GI++ + +++I + LE+ E + +++ NPSNP G+
Sbjct: 131 LY-RTLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDE------KTACLVVNNPSNPCGS 183
Query: 216 TIQRSVLEELLDFATRKNIHLVSDEIY 242
+ L+++L A R+ + +++DEIY
Sbjct: 184 VFSKRHLQKILAVAERQCVPILADEIY 210
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 148/386 (38%), Gaps = 52/386 (13%)
Query: 69 LEQQPEASTWGKGAPGFRENALFQD---YH------------GLKSFRQAMASFMEQIRG 113
L QQ +A +G P F Q+ +H G+++ R+A+A E++ G
Sbjct: 26 LAQQHQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYG 85
Query: 114 GRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGI----KI 169
+ D + I VTAGAT A L GD ++ P Y + + GI +
Sbjct: 86 YQPDAD-SDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMAL 144
Query: 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFA 229
P H F++ Q A E R R V++ P NP Q++ L
Sbjct: 145 QPPH------FRVDWQEFAALLSE------RTRLVILNTPHNPSATVWQQADFAALWQAI 192
Query: 230 TRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGT 289
I ++SDE+Y + R ER V S K + G++VG
Sbjct: 193 AGHEIFVISDEVYEHINFSQQGHASVLAHPQLR-----ERAVAVSSFGKTYHMTGWKVGY 247
Query: 290 IYSYNDKVVTTARRMSSFTLISSQT--QYLLASMLSNKKFTENYIKTNRERLQKRYQMII 347
+ + R++ + S T Q LA ML + E+Y+ QKR +++
Sbjct: 248 CVA-PAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEP--EHYLALPDFYRQKR-DILV 303
Query: 348 EGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSE 407
L + +E L F ++ S + + E W + H V + S C++
Sbjct: 304 NALNESRLEILPCEGTYFLLVDYSAV--STLDDVEFCQWLTQEHGVA---AIPLSVFCAD 358
Query: 408 P---GWFRVCFANMSEQTLEVALKRI 430
P R+CFA E TL A +R+
Sbjct: 359 PFPHKLIRLCFAK-KESTLLAAAERL 383
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 128/315 (40%), Gaps = 38/315 (12%)
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDL-----NRIVVTAGATAANELLTFILADPGDALLVP 150
G+ R+A++ + R ++D+ + +VT G+ L D GD +LVP
Sbjct: 76 GIPRLRRAISHWY------RDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVP 129
Query: 151 TPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITP-----QALEAAYKEAESKDMRVRGVL 205
P YP I I + + P LE A +E+ K R ++
Sbjct: 130 NPSYP---------IHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKP---RMMI 177
Query: 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYK 265
+ PSNP ++ E ++ A + ++ +V D Y A+
Sbjct: 178 LGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIA 237
Query: 266 DSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNK 325
++LSK + G+R+G + N ++V+ R+ S+ + T +A++ + +
Sbjct: 238 VE-----FFTLSKSYNMAGWRIGFMVG-NPELVSALARIKSYHDYGTFTPLQVAAIAALE 291
Query: 326 KFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELAL 385
+ ++ + Q+R ++++GLR AG A ++ W + E G L
Sbjct: 292 G-DQQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIP---EPYAHLGSLEF 347
Query: 386 WDSMLHEVKLNISPG 400
+L + K+++SPG
Sbjct: 348 AKKLLQDAKVSVSPG 362
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 133/351 (37%), Gaps = 38/351 (10%)
Query: 87 ENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRIVVTAGATAANELLTFILADPGD 145
EN + +HG ++F+QA+ F + R D + + + G + + +PGD
Sbjct: 77 ENQKYGAFHGKEAFKQAIVDFYQ--RQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGD 134
Query: 146 ALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205
+L+P P Y + + G K VP++ + P L K + + +
Sbjct: 135 YVLLPDPGYTDYLAGVLLADG-KPVPLNLEP-------PHYLPDWSKVDSQIIDKTKLIY 186
Query: 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYK 265
+T P+NP G+T + V +E + + +V D Y L + K
Sbjct: 187 LTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAY----GAFGFDAKNPSILASENGK 242
Query: 266 DSERVHI-VYSLSKDLGLPGFRVGTIYSYND-----KVVTTARRMSSFTLISSQTQYLLA 319
D V I +YSLSK GFRVG D K T F + Y L
Sbjct: 243 D---VAIEIYSLSKGYNXSGFRVGFAVGNKDXIQALKKYQTHTNAGXFGALQDAAIYALN 299
Query: 320 SMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTR 379
+ N KT R+R + L A + + G++ W+ P + +
Sbjct: 300 HYDDFLEEQSNVFKTRRDRFEAX-------LAKADLPFVHAKGGIYVWLETPPGYDSEQF 352
Query: 380 EGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRI 430
E L S+L ++PG + + R+ A + +Q L+ A R+
Sbjct: 353 EQFLVQEKSIL------VAPGKPFGENGNRYVRISLA-LDDQKLDEAAIRL 396
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYP 155
G S R+ +AS+ A + +++T+G + A +L +LA+PG +LVP P +
Sbjct: 97 GFLSSREEIASYY---HCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFS 153
Query: 156 GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGA 215
+ + L GI++ + +++I + LE E + +++ NPSNP G+
Sbjct: 154 LY-KTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE------KTACLIVNNPSNPCGS 206
Query: 216 TIQRSVLEELLDFATRKNIHLVSDEIY 242
+ L+++L A R+ + +++DEIY
Sbjct: 207 VFSKRHLQKILAVAARQCVPILADEIY 233
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 111/269 (41%), Gaps = 41/269 (15%)
Query: 78 WGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLT 137
W +G+P F++ ++ Q Y G+K +I+ T GAT AN L+
Sbjct: 61 WIEGSPAFKK-SVSQLYTGVKP---------------------EQILQTNGATGANLLVL 98
Query: 138 FILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197
+ L +PGD ++ P Y D+ G ++ + N + + L +
Sbjct: 99 YSLIEPGDHVISLYPTYQQL-YDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPT--- 154
Query: 198 DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXX 257
+ + I N +NP GA R+ LEEL++ A+ +++SDE+Y
Sbjct: 155 ---TKXICINNANNPTGAVXDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVY 211
Query: 258 XLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYL 317
++ V SLS LPG R+G + + N +V R +T I +
Sbjct: 212 ----------DKGIAVNSLSXTYSLPGIRIGWV-AANHQVTDILRDYRDYTXICAGVFDD 260
Query: 318 LASMLSNKKFTENYIKTNRERLQKRYQMI 346
L + L+ + E ++ NR L++ ++
Sbjct: 261 LVAQLALAHYQE-ILERNRHILEENLAIL 288
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGD----ALLVP 150
G+ R+ +A+++ + R G D + I +T GA+ + IL G +++P
Sbjct: 129 QGVNCIREDVAAYITR-RDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIP 187
Query: 151 TPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK-DMRVRGVLITNP 209
P YP + + I+ V + D N + + L A +EA+ D +V + I NP
Sbjct: 188 IPQYPLYSAVISELDAIQ-VNYYLDEENCWALNVNELRRAVQEAKDHCDPKV--LCIINP 244
Query: 210 SNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
NP G R +E+++ FA + + L++DE+Y
Sbjct: 245 GNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVY 277
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 27/171 (15%)
Query: 93 DYHGLKSFRQAMASFMEQIRGG--------------------RAKFDLNRIVVTAGATAA 132
D+ + +QA+ + EQ+ G + FD IV G A
Sbjct: 42 DFEVMPEVKQAIHDYAEQLVYGYTYASDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPA 101
Query: 133 NELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNN-FQITPQALEAAY 191
+ G+A+L+ +P YP F R +R K+V N FQI + LE
Sbjct: 102 ISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNR-KLVSNSLKEENGLFQIDFEQLENDI 160
Query: 192 KEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
E + V+ L+ NP NP G +R VLE++ + ++ LVSDEI+
Sbjct: 161 VEND-----VKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIH 206
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/342 (17%), Positives = 142/342 (41%), Gaps = 26/342 (7%)
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYP 155
G R+A+A +++ G + + I+VT G + L + +PGD +++P P++
Sbjct: 68 GEPRLREAIAQKLQRDNG--LCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWV 125
Query: 156 GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGA 215
+ ++ G ++ + F+++P+ + A + + ++ PSNP G
Sbjct: 126 SYPEMVKLAEGTPVI-LPTTVETQFKVSPEQIRQAITP------KTKLLVFNTPSNPTGM 178
Query: 216 TIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYS 275
+ + A + ++SDEIY + A + ER +
Sbjct: 179 VYTPDEVRAIAQVAVEAGLWVLSDEIY----EKILYDDAQHLSIGAASPEAYERSVVCSG 234
Query: 276 LSKDLGLPGFRVGTIYSYNDKV-VTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKT 334
+K + G+RVG + V T + S + + + QY + N +++ ++
Sbjct: 235 FAKTYAMTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYEN---SQDCVQE 291
Query: 335 NRERLQKRYQMIIEGLRS-AGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEV 393
+R + +++ L + G+EC K + + + +++ +T L +L +
Sbjct: 292 MLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIA-----KTGRSSLDFCSELLDQH 346
Query: 394 KLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435
++ PG++ + R+ +A T++ ++R+ F+
Sbjct: 347 QVATVPGAAFGADD--CIRLSYAT-DLDTIKRGMERLEKFLH 385
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 131/323 (40%), Gaps = 38/323 (11%)
Query: 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNF 180
N I++T+G+ A +L+ + +PGD ++V P Y + + + + I D
Sbjct: 141 NDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEP-QYIQIPLDDEG-- 197
Query: 181 QITPQALEAAYKEAESKDMRVRGVLITNPS--NPLGATIQRSVLEELLDFATRKNIHLVS 238
+ + LE KE +S+ +V+ V+ T P+ NP G T+ + LL+ A+ + +V
Sbjct: 198 -MKVEILEEKLKELKSQGKKVK-VVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVE 255
Query: 239 DEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVV 298
D+ Y + + + RV + + SK L PGFR+G + +
Sbjct: 256 DDPYGELRYSGNPEK------KIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIR 308
Query: 299 TTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS---AGI 355
S L ++ ++A + + E +I R+ + R ++E L G+
Sbjct: 309 KMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGV 368
Query: 356 ECLKGNAGLFCWMNL------SPLLEEQTREGELALWDSMLHEVKLNISPGSS--CHCSE 407
+ K G+F W+ L +LE ++G + PG + H
Sbjct: 369 KWTKPEGGMFIWVTLPDGIDSKKMLERAIKKG-------------VAYVPGEAFYAHRDV 415
Query: 408 PGWFRVCFANMSEQTLEVALKRI 430
R+ F + E + +KR+
Sbjct: 416 KNTMRLNFTYVDEDKIMEGIKRL 438
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNF 180
+ +V+ +G + + + D GD LVP P +P ++ + GI + +C N++
Sbjct: 105 DNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCK-AYGIGMHFYNCRPENDW 163
Query: 181 QITPQALEAAYKEAES-KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSD 239
EA E KD + + +++TNPSNP G+ R +E+++ A + L SD
Sbjct: 164 -------EADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSD 216
Query: 240 EIY 242
EIY
Sbjct: 217 EIY 219
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 110/260 (42%), Gaps = 16/260 (6%)
Query: 123 IVVTAGATAANELLTFI--LADPGDALLVPTPYYPGFDRDLRWRTGIKI-VPIHCDSSNN 179
I+V GA + L I L DPGD +++ P+Y ++ +R + + +P+ ++
Sbjct: 88 ILVAVGAYGS--LFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDG 145
Query: 180 FQITPQALEAAYKEAESK-DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238
+ T +E ESK + + +++ P NPLG R L+ + D + + +S
Sbjct: 146 MKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCIS 205
Query: 239 DEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIY--SYNDK 296
DE+Y A ER + S K + G+++G ++ K
Sbjct: 206 DEVYEWLVYTGHTHVKI-----ATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIK 260
Query: 297 VVTTARRMSSFTLISSQTQYLLASMLSNKKFTEN---YIKTNRERLQKRYQMIIEGLRSA 353
+ T ++ S +T + L + + K ++ Y + + L+ + ++ L S
Sbjct: 261 HLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV 320
Query: 354 GIECLKGNAGLFCWMNLSPL 373
G++ + + G F ++S L
Sbjct: 321 GLKPIVPDGGYFIIADVSSL 340
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 123 IVVTAGATAANELLTFI--LADPGDALLVPTPYYPGFDRDLRWRTGIKI-VPIHCDSSNN 179
I+V GA + L I L DPGD +++ P+Y ++ +R + + +P+ ++
Sbjct: 88 ILVAVGAYGS--LFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDG 145
Query: 180 FQITPQALEAAYKEAESK-DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238
+ T +E ESK + + +++ P NPLG R L+ + D + + +S
Sbjct: 146 MKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCIS 205
Query: 239 DEIY 242
DE+Y
Sbjct: 206 DEVY 209
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 131/323 (40%), Gaps = 38/323 (11%)
Query: 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNF 180
N I++T+G+ A +L+ + +PGD ++V P Y + + + + I D
Sbjct: 96 NDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEP-QYIQIPLDDEG-- 152
Query: 181 QITPQALEAAYKEAESKDMRVRGVLITNPS--NPLGATIQRSVLEELLDFATRKNIHLVS 238
+ + LE KE +S+ +V+ V+ T P+ NP G T+ + LL+ A+ + +V
Sbjct: 153 -MKVEILEEKLKELKSQGKKVK-VVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVE 210
Query: 239 DEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVV 298
D+ Y + + + RV + + SK L PGFR+G + +
Sbjct: 211 DDPYGELRYSGNPEK------KIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIR 263
Query: 299 TTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS---AGI 355
S L ++ ++A + + E +I R+ + R ++E L G+
Sbjct: 264 KMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGV 323
Query: 356 ECLKGNAGLFCWMNL------SPLLEEQTREGELALWDSMLHEVKLNISPGSS--CHCSE 407
+ K G+F W+ L +LE ++G + PG + H
Sbjct: 324 KWTKPEGGMFIWVTLPDGIDSKKMLERAIKKG-------------VAYVPGEAFYAHRDV 370
Query: 408 PGWFRVCFANMSEQTLEVALKRI 430
R+ F + E + +KR+
Sbjct: 371 KNTMRLNFTYVDEDKIMEGIKRL 393
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 113/291 (38%), Gaps = 28/291 (9%)
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYP 155
G + +ASF ++ G L ++VT G A L D GD +++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEID-PLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFD 126
Query: 156 GFDRDLRWRTG------IKIVPIH---CDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206
++ G +K PI SS+N+Q+ P L + R + +++
Sbjct: 127 CYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS------RTKALVL 180
Query: 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKD 266
P+NPLG R LE + + ++ ++DE+Y A
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISI-----ASLPGM 235
Query: 267 SERVHIVYSLSKDLGLPGFRVGTIYSYND--KVVTTARRMSSFTLISSQTQYLLASMLSN 324
ER + S K G++VG + + K + T + S F +Q+Q +A
Sbjct: 236 WERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFH-CPTQSQAAVAESFER 294
Query: 325 KKF----TENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLS 371
++ +Y + +Q+ +I L+S G++ L F ++S
Sbjct: 295 EQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDIS 345
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 102 QAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL 161
QA++ Q+ R + ++VT GA A D GD +++ P++ ++ +
Sbjct: 84 QALSKLYSQLVD-RTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMV 142
Query: 162 RWRTGI-KIVPIHCD------SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLG 214
+ GI + +P+ + SS ++ + LEA + E + + ++I P NPLG
Sbjct: 143 KAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE------KTKMIIINTPHNPLG 196
Query: 215 ATIQRSVLEELLDFATRKNIHLVSDEIY 242
+ R+ LE + + + N+ VSDE+Y
Sbjct: 197 KVMDRAELEVVANLCKKWNVLCVSDEVY 224
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 102 QAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL 161
QA++ Q+ R + ++VT GA A D GD +++ P++ ++ +
Sbjct: 84 QALSKLYSQLVD-RTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMV 142
Query: 162 RWRTGI-KIVPIHCD------SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLG 214
+ GI + +P+ + SS ++ + LEA + E + + ++I P NPLG
Sbjct: 143 KAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE------KTKMIIINTPHNPLG 196
Query: 215 ATIQRSVLEELLDFATRKNIHLVSDEIY 242
+ R+ LE + + + N+ VSDE+Y
Sbjct: 197 KVMDRAELEVVANLCKKWNVLCVSDEVY 224
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 92/240 (38%), Gaps = 28/240 (11%)
Query: 136 LTFILADPGDALLVPTPYYP---GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYK 192
L L +P D LL+P YP G R RT ++P+ D + + P E ++
Sbjct: 103 LLLALTEPEDLLLLPEVAYPSYFGAARVASLRT--FLIPLREDGLADLKAVP---EGVWR 157
Query: 193 EAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXX 252
EA+ +L+ P+NP GA EE L A + + L+ D Y
Sbjct: 158 EAKV-------LLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAP 210
Query: 253 XXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR--RMSSFTLI 310
ERV ++SLSK L GFR+G + + R + F
Sbjct: 211 SPLALP------GAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDFNQY 264
Query: 311 SSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNL 370
+ + + ++ + K+ Y + RER + E L+ + L A ++ W L
Sbjct: 265 AGVLRMGVEALKTPKEVVRGYARVYRERALG----MAEALKGV-LSLLPPRATMYLWGRL 319
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 152/386 (39%), Gaps = 75/386 (19%)
Query: 80 KGAPGFRE---NALFQDYHGL----KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAA 132
K AP + N L Q+ +G S+ +++ +++ + + K + ++ + G A
Sbjct: 45 KAAPCIIDSLKNRLEQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSEW--LIYSPGVIPA 102
Query: 133 NELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITP-QALEAA- 190
LL L D +++ P Y F+ ++ +++ I+P Q LE
Sbjct: 103 ISLLINELTKANDKIMIQEPVYSPFNSVVK------------NNNRELIISPLQKLENGN 150
Query: 191 ----YKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXX 246
Y++ E+K V+ ++ NP NP+G + L++L D + N+ ++SDEI+
Sbjct: 151 YIMDYEDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDII 210
Query: 247 XXXXXXXXXXXXLEARQYKDSERVHIV-YSLSKDLGLPGFRVGTI-------YSYNDKVV 298
A K+ E+ I + +K + G + + Y D
Sbjct: 211 LKKHKHIPM-----ASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAF 265
Query: 299 T--TARRMSSFTLISSQTQY---------LLASMLSNKKFTENYIKTNRERLQKRYQMII 347
T +R + F+L++++ Y L + SN F YI N +L+ R
Sbjct: 266 TRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVR----- 320
Query: 348 EGLRSAGIECLKGNAGLFCWMNLSPL-LEEQTREGELALWDSMLHEVKLNISPGSSCHCS 406
K W++ S L L ++ E L + + K+ ++ G+S
Sbjct: 321 -----------KPEGTYLLWVDFSALGLSDEELESIL------VQKGKVALNQGNSFGIG 363
Query: 407 EPGWFRVCFANMSEQTLEVALKRIHN 432
G+ R+ A LE AL RI N
Sbjct: 364 GSGYQRINLA-CPRSMLEEALIRIKN 388
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYP 155
G + +ASF ++ G L ++VT G A L D GD +++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEID-PLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFD 126
Query: 156 GFDRDLRWRTG------IKIVPIH---CDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206
++ G +K PI SS+N+Q+ P L + R + +++
Sbjct: 127 CYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS------RTKALVL 180
Query: 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
P+NPLG R LE + + ++ ++DE+Y
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVY 216
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYP 155
G + +ASF ++ G L ++VT G A L D GD +++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEID-PLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFD 126
Query: 156 GFDRDLRWRTG------IKIVPIH---CDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206
++ G +K PI SS+N+Q+ P L + R + +++
Sbjct: 127 CYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS------RTKALVL 180
Query: 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
P+NPLG R LE + + ++ ++DE+Y
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVY 216
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 120/330 (36%), Gaps = 49/330 (14%)
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATA-ANELLTFILADPGDALLVPTPYY 154
GL + RQ ++ R D I ++ GA LL+F P + + P Y
Sbjct: 76 GLPALRQKLSEDFY-----RGFVDAKEIFISDGAKVDLFRLLSFF--GPNQTVAIQDPSY 128
Query: 155 PGFDRDLRWRTGIK-IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPL 213
P + D+ TG K I+ + C N F P+ E D + + + +P+NP
Sbjct: 129 PAY-LDIARLTGAKEIIALPCLQENAF--FPEFPE---------DTHIDILCLCSPNNPT 176
Query: 214 GATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIV 273
G + + L ++ +A I ++ D Y +AR +
Sbjct: 177 GTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIE-----I 231
Query: 274 YSLSKDLGLPGFRVG-------TIYSYNDKVVTTARRMSSFTL----ISSQTQYLLASML 322
S SK LG G R+G Y+ V+ R S T I +Q + +
Sbjct: 232 NSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSI 291
Query: 323 SNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGE 382
+ +Y + N + L+K L + G E G + W+ + Q +
Sbjct: 292 LPQLEAIHYYRENSDLLRK-------ALLATGFEVFGGEHAPYLWVKPT-----QANISD 339
Query: 383 LALWDSMLHEVKLNISPGSSCHCSEPGWFR 412
L+D L E + I+PG S G+ R
Sbjct: 340 RDLFDFFLREYHIAITPGIGFGRSGSGFVR 369
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 109/277 (39%), Gaps = 16/277 (5%)
Query: 100 FRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR 159
+Q + +E+ G D + ++ T G+ A +L+ + D ++ P Y G
Sbjct: 90 LKQQILKLLERXYGITG-LDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAIN 148
Query: 160 DLR-WRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ 218
R + +VP+ D + + + L K + K ++ V ++N NP G T
Sbjct: 149 AFRQYLANFVVVPLE-DDGXDLNVLERKLSEFDKNGKIKQVKFIYV-VSNFHNPAGVTTS 206
Query: 219 RSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSK 278
+ L++ A + ++ +V D+ Y + ERV ++ + SK
Sbjct: 207 LEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIF------KIGGPERVVLLNTFSK 260
Query: 279 DLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRER 338
L PG R+G + + + + S L S + LA+ + +K E
Sbjct: 261 VLA-PGLRIGXVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIEL 319
Query: 339 LQKRYQMIIEGLRS-----AGIECLKGNAGLFCWMNL 370
+++ + + L G++ +K GLF W+ L
Sbjct: 320 YRRKRTVXLNALEEYFSDIPGVKWVKSEGGLFIWLTL 356
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/352 (18%), Positives = 138/352 (39%), Gaps = 28/352 (7%)
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDLN----RIVVTAGATAANELLTFILADPGDALLVPT 151
G R A+A +ME+ ++D+ I+ AG+ A +L+ + +PGD ++V
Sbjct: 84 GFTPLRLALARWMEK------RYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEA 137
Query: 152 PYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSN 211
P Y + ++ + + I D ++ + + K +++ + T N
Sbjct: 138 PTYLAAIQAFKYYDP-EFISIPLD-DKGMRVDLLEEKLEELRKQGKRVKIVYTVSTF-QN 194
Query: 212 PLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVH 271
P G T+ ++LL+ A + +V D Y + + D RV
Sbjct: 195 PAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTP------PIKHFDDYGRVI 248
Query: 272 IVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENY 331
+ + SK L PGFR+G + ++ + S L ++ +A + + +
Sbjct: 249 YLGTFSKILA-PGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEH 307
Query: 332 IKTNRERLQKRYQMIIEGLRS---AGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDS 388
I E + R ++E L G+E K G+F + L + + +L + +
Sbjct: 308 IPKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTLP-----EGIDTKLMMERA 362
Query: 389 MLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRERR 440
+ V H + R+ F + E+T+ ++R+ +++ +R
Sbjct: 363 VAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEMKR 414
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 143 PGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202
P A++V TP + + R L ++G +I ++ +Q+T LEA + +
Sbjct: 98 PRRAMIV-TPGFAEYGRALA-QSGCEIRRWSLREADGWQLTDAILEALTPDLDC------ 149
Query: 203 GVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEAR 262
+ + P+NP G +R +L+ + D NI+L+ DE +
Sbjct: 150 -LFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPA------- 201
Query: 263 QYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR 303
KD+ + ++ SL+K +PG R+G + + +D + RR
Sbjct: 202 -LKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRR 241
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 115 RAKFDL--NRIVVTAGATAA--NELLTFILADPGDALLVPTP-YYPGFDRDLRWRTGIKI 169
R ++D+ + I+ TAG A N + F PGD +++ TP YYP F I
Sbjct: 82 RHQWDIQTDWIINTAGVVPAVFNAVREF--TKPGDGVIIITPVYYPFFMAIKNQERKI-- 137
Query: 170 VPIHCD---SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELL 226
I C+ + I Q LE SKD + +L +P NP+G ++ L+++
Sbjct: 138 --IECELLEKDGYYTIDFQKLEKL-----SKDKNNKALLFCSPHNPVGRVWKKDELQKIK 190
Query: 227 DFATRKNIHLVSDEIY 242
D + ++ L SDEI+
Sbjct: 191 DIVLKSDLMLWSDEIH 206
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKI-VPIHCDSSNN 179
++VT GAT A L +PG +L+ P+Y + + ++ VP+ D
Sbjct: 87 TEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDG-RG 145
Query: 180 FQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSD 239
F + AL A R R ++I +P NP GA + + L + + A N+ +++D
Sbjct: 146 FALDADALRRAVTP------RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITD 199
Query: 240 EIY 242
E+Y
Sbjct: 200 EVY 202
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 18/137 (13%)
Query: 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELL 226
+K VPIH D N +Q + L+ + KD V+ NPSNP + + L+ +
Sbjct: 217 LKEVPIHADPDNGWQYSDAELD------KLKDPDVKIFFCVNPSNPPSVKMDQRSLDRVR 270
Query: 227 DFAT--RKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPG 284
R ++ +++D++Y +VYS SK G G
Sbjct: 271 AIVAEQRPDLLILTDDVYGTFADEFQSLFSVC----------PRNTLLVYSFSKYFGATG 320
Query: 285 FRVGTIYSYNDKVVTTA 301
+R+G I ++ D V A
Sbjct: 321 WRLGVIAAHKDNVFDHA 337
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 131/315 (41%), Gaps = 28/315 (8%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQI 182
I+ G A + ++ GDA+L+ +P Y F R +R H N+ QI
Sbjct: 122 ILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLND-------HRLVENSLQI 174
Query: 183 TPQALEAAYKEAESK--DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240
E +++ E D V+ L+ +P NP G L ++ + + + LVSDE
Sbjct: 175 INGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDE 234
Query: 241 IYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTT 300
I+ L+A YKD I+ S +K + G + N+ +
Sbjct: 235 IH-QDLALFGNTHHSLNTLDA-SYKDF--TIILSSATKTFNIAGTKNSFAIIQNESL--- 287
Query: 301 ARRMSSFTLISSQTQYLLASMLSNK---KFTENYIKTNRERLQKRYQMIIEGLRS-AGIE 356
R+ L ++Q + M++ + ++ + +++ + ++ +++I+ L + I+
Sbjct: 288 RRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIK 347
Query: 357 CLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPG-WFRVCF 415
++ W++ S Q + L + + +E K+ ++ G+ H + G +F
Sbjct: 348 VMEPEGTYLVWLDFSAYAIAQPQ-----LSEKLQNEAKVVLNDGA--HFGKEGKYFARLN 400
Query: 416 ANMSEQTLEVALKRI 430
+ T++ AL RI
Sbjct: 401 VATPKNTVQEALSRI 415
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 27/198 (13%)
Query: 154 YPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPL 213
+PGFD +R I + + +F+I ++ R V++ NPSNP
Sbjct: 97 WPGFDG---YRARIAVSGLR-----HFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPT 148
Query: 214 GATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIV 273
G + L++L A + L+ DE Y AR E +
Sbjct: 149 GQALSAGELDQLRQRAGK----LLIDETY-----------VDYSSFRARGLAYGENELVF 193
Query: 274 YSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYI- 332
S SK GL G R+G ++ ++ ++ +R F + + + L + L N + E +I
Sbjct: 194 RSFSKSYGLAGLRLGALFGPSE-LIAAXKRKQWFCNVGTLDLHALEAALDNDRAREAHIA 252
Query: 333 KTNRERLQKRYQMIIEGL 350
KT +R +R + GL
Sbjct: 253 KTLAQR--RRVADALRGL 268
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 147 LLVPTPYYPGFDRDLR--WRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204
++VPTP YP F L R GI I D++ + +E ++ R +
Sbjct: 108 VIVPTPAYPPFFHLLSATQREGIFI-----DATGGINL--HDVEKGFQAG------ARSI 154
Query: 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
L+ NP NPLG L EL D A R + ++ DEI+
Sbjct: 155 LLCNPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIH 192
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 89/234 (38%), Gaps = 34/234 (14%)
Query: 76 STWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANEL 135
+ W G E L ++ + ++ + + A + Q R D N I+VT G TAA
Sbjct: 23 TVWTDGDKDHLEKHLVENLNCIRHYPEPDAGTLRQXLAKRNSVDNNAILVTNGPTAA--F 80
Query: 136 LTFILADPGDALLVPTPYYPGFDRDLR-WRTGIKIVPIHCDSSNNFQITPQALEAAYKEA 194
A G L+ P + ++ R + + P + D EA +
Sbjct: 81 YQIAQAFRGSRSLIAIPSFAEYEDACRXYEHEVCFYPSNEDIG----------EADFSNX 130
Query: 195 ESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXX 254
+ + NP+NP G +QR+ + LL+ + V D+ Y
Sbjct: 131 DF-------CWLCNPNNPDGRLLQRTEILRLLN--DHPDTTFVLDQSYVSFTTEEV---- 177
Query: 255 XXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT 308
+ K + + VYS S G+PG R+G I + D +R+++F+
Sbjct: 178 ----IRPADIKGRKNLVXVYSFSHAYGIPGLRIGYIVANKD----FXKRVAAFS 223
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 95/259 (36%), Gaps = 21/259 (8%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG-IKIVPIH----CDSS 177
+ VT GA L + GD ++V P++ + ++ G + VPI+ D
Sbjct: 121 VTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQR 180
Query: 178 NN----FQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN 233
N + I + E A + + V+I P NP+G R L L + + N
Sbjct: 181 NTRGEEWTIDFEQFEKAITS------KTKAVIINTPHNPIGKVFTREELTTLGNICVKHN 234
Query: 234 IHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSY 293
+ ++SDE+Y E Q + V S G+R+G + S
Sbjct: 235 VVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLT-----VGSAGXSFAATGWRIGWVLSL 289
Query: 294 NDKVVTTARRMSSFTLISSQTQYLLASMLS-NKKFTENYIKTNRERLQKRYQMIIEGLRS 352
N ++++ A + + +S + A S N Y + R+ ++++
Sbjct: 290 NAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDE 349
Query: 353 AGIECLKGNAGLFCWMNLS 371
G+ F ++ S
Sbjct: 350 LGLPYTAPEGTYFVLVDFS 368
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 94/256 (36%), Gaps = 37/256 (14%)
Query: 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXL 259
R + +P+NP G R L +L+DFA ++ D Y
Sbjct: 212 RTDVIFFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPR------- 264
Query: 260 EARQYKDSERVHI-VYSLSKDLGLPGFRVG-------TIYSYNDKVVTTARRM--SSFTL 309
+ + V I V S SK G G R+G +YS ++ R+ +SF
Sbjct: 265 SIYEIPGAREVAIEVSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNG 324
Query: 310 ISSQTQYLLASMLSNKKFTE-----NYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGL 364
S+ Q + LS+ E NY K NR +++++ L S G++ G
Sbjct: 325 ASNIAQAGGLACLSSGGLKEIRSVNNYYKENR-------KILMDTLVSLGLKVYGGVNAP 377
Query: 365 FCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLE 424
+ W++ +++ +L + PGS + R+ + +E
Sbjct: 378 YLWVHFK-------GSKSWDVFNEILENTHIITVPGSGFGPGGEEYLRISGFGRRDHIVE 430
Query: 425 VALKRIHNFMQKRERR 440
A KR+ NF R +
Sbjct: 431 -ASKRLQNFFNTRTKH 445
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 83 PGFRENALFQDYHGLKSFRQAMASFMEQIRGG-------RAKFDL--NRIVVTAGATAAN 133
P F ++AL H L + ++ +F E +R R K +L N ++ T G+
Sbjct: 38 PKFIQDALKNHTHSLNIYPKS--AFEESLRAAQRGFFKRRFKIELKENELISTLGS---R 92
Query: 134 ELL----TFILADPGDALLV-PTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALE 188
E+L +F+L D + + P P+Y ++ ++ IK + + TP E
Sbjct: 93 EVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKF---IKAKSLLXPLTKENDFTPSLNE 149
Query: 189 AAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXX 248
KE + D+ V++ +P+NP G T+ L + A + + L++DE Y
Sbjct: 150 ---KELQEVDL----VILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECY----SE 198
Query: 249 XXXXXXXXXXLEARQYKDSE---RVHIVYSLSKDLGLPGFRVGTI 290
LEA +E V +++SLSK PG R G I
Sbjct: 199 IYENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGFI 243
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQ 263
+ ++ P+NP G I L +L A + NI LV D Y EAR
Sbjct: 184 ICVSRPTNPTGNVITDEELXKLDRLANQHNIPLVIDNAYGVPFPGIIFS-------EARP 236
Query: 264 YKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVT 299
+ + + SLSK LGLPG R G I + NDK +T
Sbjct: 237 LWNPNII-LCXSLSK-LGLPGSRCGIIIA-NDKTIT 269
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQI 182
IV +AG A +++LV P YP F + V ++ + I
Sbjct: 85 IVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNNRQLCVSPLQKQNDTYAI 144
Query: 183 TPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
+ LE +++ V+ L+ +P NP+G ++ L +L T+ N+ +V+DEI+
Sbjct: 145 DFEHLEKQFQQG------VKLXLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIH 198
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 107/275 (38%), Gaps = 41/275 (14%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQI 182
IV+ GA+ EL + + +L+ P Y ++ + + + G+ +V F
Sbjct: 81 IVLGNGASEIIELSISLF----EKILIIVPSYAEYEINAK-KHGVSVV---------FSY 126
Query: 183 TPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
+ + Y++ SK V V+I NP+NP G I + +L A K ++ DE +
Sbjct: 127 LDENMCIDYEDIISKIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAF 186
Query: 243 XXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR 302
+ K+ + I+ +++K +PG R G + N ++ +
Sbjct: 187 IEFTGDPSSSF-------VGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIK 239
Query: 303 RMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362
+ I+ + + L + NYI+ + ++K + IE L G
Sbjct: 240 AKQNPWNINCFAEMAAINCLKD----TNYIEESLLWIKKERKRFIEELNKIG-------- 287
Query: 363 GLFCWMNLSP-----LLEEQTREGELALWDSMLHE 392
F SP L + GE L+DS+L E
Sbjct: 288 --FIKRVFSPHANFVLCRLENISGE-KLYDSLLKE 319
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 91/224 (40%), Gaps = 33/224 (14%)
Query: 122 RIVVTAGATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS--- 177
+++V+ GA ELL +PG DA+L P Y + + + + C +
Sbjct: 77 QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYS------VSAETIGVECRTVPTL 130
Query: 178 NNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLV 237
+N+Q+ Q + K V+ V + +P+NP G I LL+ TR +V
Sbjct: 131 DNWQLDLQGIS-------DKLDGVKVVYVCSPNNPTGQLINPQDFRTLLEL-TRGKAIVV 182
Query: 238 SDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKV 297
+DE Y A + + I+ +LSK L G R G + N++V
Sbjct: 183 ADEAYIEFCPQASL---------AGWLAEYPHLAILRTLSKAFALAGLRCGFTLA-NEEV 232
Query: 298 VTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQK 341
+ ++ + +S+ + A LS + I RER+ +
Sbjct: 233 INLLXKVIAPYPLSTPVADIAAQALSPQG-----IVAXRERVAQ 271
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD 158
S R+ +A F + + ++ TAG ELLT +L D + TP + +
Sbjct: 71 SLRKEVADFYQ--------LEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYR 122
Query: 159 RD-LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI 217
++ L ++ +P+ D ++ + A+ D + V I NP+NP G I
Sbjct: 123 QNALIEGAEVREIPLLQDGEHDLEGXLNAI----------DEKTTIVWICNPNNPTGNYI 172
Query: 218 QRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLS 277
+ + ++ LD ++ +V DE Y R YK+ + I + S
Sbjct: 173 ELADIQAFLD-RVPSDVLVVLDEAYIEYVTPQPEKHEKL----VRTYKN---LIITRTFS 224
Query: 278 KDLGLPGFRVGTIYSYNDK 296
K GL RVG Y DK
Sbjct: 225 KIYGLASARVG--YGIADK 241
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 91/224 (40%), Gaps = 33/224 (14%)
Query: 122 RIVVTAGATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS--- 177
+++V+ GA ELL +PG DA+L P Y + + + + C +
Sbjct: 77 QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS------VSAETIGVECRTVPTL 130
Query: 178 NNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLV 237
+N+Q+ Q + K V+ V + +P+NP G I LL+ TR +V
Sbjct: 131 DNWQLDLQGIS-------DKLDGVKVVYVCSPNNPTGQLINPQDFRTLLEL-TRGKAIVV 182
Query: 238 SDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKV 297
+DE Y A + + I+ +LSK L G R G + N++V
Sbjct: 183 ADEAYIEFCPQASL---------AGWLAEYPHLAILRTLSKAFALAGLRCGFTLA-NEEV 232
Query: 298 VTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQK 341
+ ++ + +S+ + A LS + I RER+ +
Sbjct: 233 INLLMKVIAPYPLSTPVADIAAQALSPQG-----IVAMRERVAQ 271
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 7/143 (4%)
Query: 100 FRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR 159
+ +A+A + E R K D V +G A PGD +LV P Y F
Sbjct: 67 YYKAVADWEEIEHRARPKEDW--CVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYS 124
Query: 160 DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQR 219
+ G +++ S ++ + ++ A E + VR + NP NP+G
Sbjct: 125 VIE-GNGRRVI----SSDLIYENSKYSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSE 179
Query: 220 SVLEELLDFATRKNIHLVSDEIY 242
++ + + + + L+SDEI+
Sbjct: 180 EEVKRIAELCAKHQVLLISDEIH 202
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 18/134 (13%)
Query: 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFA 229
V I+ D S N+Q L+ + KD ++ NPSNP + + LE + +
Sbjct: 221 VAINADPSLNWQYPDSELD------KLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIV 274
Query: 230 T--RKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRV 287
R ++ +++D++Y E +VYS SK G G+R+
Sbjct: 275 AEHRPDLMILTDDVYGTFADDFQSLFAIC----------PENTLLVYSFSKYFGATGWRL 324
Query: 288 GTIYSYNDKVVTTA 301
G + ++ V A
Sbjct: 325 GVVAAHQQNVFDLA 338
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 18/134 (13%)
Query: 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFA 229
V I+ D S N+Q L+ + KD ++ NPSNP + + LE + +
Sbjct: 221 VAINADPSLNWQYPDSELD------KLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIV 274
Query: 230 T--RKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRV 287
R ++ +++D++Y E +VYS SK G G+R+
Sbjct: 275 AEHRPDLMILTDDVYGTFADDFQSLFAIC----------PENTLLVYSFSKYFGATGWRL 324
Query: 288 GTIYSYNDKVVTTA 301
G + ++ V A
Sbjct: 325 GVVAAHQQNVFDLA 338
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 28/180 (15%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR--DLRWRTGIKIVPIHCDSSNNF 180
IV + A N LL GD + + P + + R +L+ ++ V +H N++
Sbjct: 177 IVYAFHSLAENHLLK-----KGDKIAINEPIFTPYLRIPELKDYELVE-VDLHSYEKNDW 230
Query: 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN--IHLVS 238
+I P +E + KD ++ +++ NP+NP + L + A KN + ++S
Sbjct: 231 EIEPNEIE------KLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQ-AVEKNPKLXIIS 283
Query: 239 DEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVV 298
DE+Y +VYS S G G+R+G I + N+K V
Sbjct: 284 DEVYGAFVPNFKSIYSVVPY----------NTXLVYSYSXLFGCTGWRLGVI-ALNEKNV 332
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 24/182 (13%)
Query: 197 KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXX 256
K+ R+ + + P+NP G + L + A R +I L+ D Y
Sbjct: 203 KEGRIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAYGXPFPNIIYS---- 258
Query: 257 XXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQY 316
+A D+ + + +SLSK +GLPG R G I + D V A + + + T++
Sbjct: 259 ---DAHLNWDNNTI-LCFSLSK-IGLPGXRTGIIVA--DAKVIEAVSAXNAVVNLAPTRF 311
Query: 317 ---LLASMLSN---KKFTENYIKTNRERLQKRYQMIIEGLRSA----GIECLKGNAGLFC 366
+ +++N K+ ++N IK QK+ + ++ L+ A + K +F
Sbjct: 312 GAAIATPLVANDRIKQLSDNEIKP---FYQKQATLAVKLLKQALGDYPLXIHKPEGAIFL 368
Query: 367 WM 368
W+
Sbjct: 369 WL 370
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 27/158 (17%)
Query: 95 HGLKSFRQAMASFMEQIRGGRA----------KFDLNRIVVTAGATAANELLTFILADPG 144
G + R+A+AS GRA K D+ RI + G+ T + DP
Sbjct: 111 QGQGALREAVASTFYG-HAGRAADEIFISDGSKCDIARIQMMFGSKP-----TVAVQDPS 164
Query: 145 DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204
+ V T G D I + C+ N+F P SK R +
Sbjct: 165 YPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHF--FPDL---------SKAKRTDII 213
Query: 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
+P+NP GA R+ L EL++FA + LV D Y
Sbjct: 214 FFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAY 251
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 141 ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS-SNNFQITPQALEAAYKEAESKDM 199
++ G+ +++ TP Y F + + ++P+ + ++ + LEA + E K M
Sbjct: 108 SETGEGVVIHTPAYDAFYKAIE-GNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIM 166
Query: 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
L+ +P NP G LE + D R + ++SDEI+
Sbjct: 167 -----LLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIH 204
>pdb|3RQ1|A Chain A, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|B Chain B, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|C Chain C, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|D Chain D, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
Length = 418
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC-DSSNNF 180
R + TAG T L +PGD +L Y+ + R + TG +V D NNF
Sbjct: 104 RSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAY-RVICSDTGRTLVTYSLFDEHNNF 162
Query: 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDF 228
+A + E +K V + T +NP G +I+ + +L+F
Sbjct: 163 N--HEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNF 208
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 76/207 (36%), Gaps = 18/207 (8%)
Query: 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRIVVTAGATAANELLTFILADPGDALLV 149
+ +Y G R +A + G A D + +++T G A L GD + +
Sbjct: 74 YTEYRGDLGIRDLLAPRLAAFTG--APVDARDGLIITPGTQGALFLAVAATVARGDKVAI 131
Query: 150 PTPYYPGFDRDLRWRTGIKIVPIHCD----SSNNFQITPQALEAAYKEAESKDMRVRGVL 205
P Y + + + G + VP+ D + LE A+K R L
Sbjct: 132 VQPDYFANRKLVEFFEG-EXVPVQLDYVSADETRAGLDLTGLEEAFKAG------ARVFL 184
Query: 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYK 265
+NP+NP G + ++ A R +++D++Y L A
Sbjct: 185 FSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLY----SRLRYAGASYTHLRAEAAV 240
Query: 266 DSERVHIVYSLSKDLGLPGFRVGTIYS 292
D+E V + S L G+R+G +
Sbjct: 241 DAENVVTIXGPSXTESLSGYRLGVAFG 267
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 112/317 (35%), Gaps = 23/317 (7%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQI 182
+++T G+ A +L+ + D G +L+ P Y G + R + G + + +
Sbjct: 94 VLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQ-GPRFLTVPAGEEGP--- 149
Query: 183 TPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
ALE K + + LI + NP G + LL + + +V D+ Y
Sbjct: 150 DLDALEEVLKRERPRFL----YLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAY 205
Query: 243 XXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR 302
Y V + S SK L PG RV ++ + + +
Sbjct: 206 RELYFGEARLPSLFELAREAGYPG---VIYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQ 261
Query: 303 RMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIEC--LKG 360
L + +L L + F+E + R +K M+ R E +
Sbjct: 262 AKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRP 321
Query: 361 NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPG--WFRVCFANM 418
G+F WM L L + L+ L E + PG + G R+ +A +
Sbjct: 322 KGGMFVWMELPKGLSAE------GLFRRALEE-NVAFVPGGPFFANGGGENTLRLSYATL 374
Query: 419 SEQTLEVALKRIHNFMQ 435
+ + ++R+ ++
Sbjct: 375 DREGIAEGVRRLGRALK 391
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 136/334 (40%), Gaps = 41/334 (12%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQI 182
+ VT+G+ + ++ +PGD +L+ P Y G + L G I+ + D S I
Sbjct: 111 LCVTSGSQQGLXKVFEMIINPGDNVLLDEPAYSGTLQSLH-PLGCNIINVASDESG---I 166
Query: 183 TPQALE---AAYKEAESKDMRVRG----VLITNPSNPLGATIQRSVLEELLDFATRKNIH 235
P +L + +K ++K+ + + N +NP G ++ +E+ + A + +
Sbjct: 167 VPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFL 226
Query: 236 LVSDE-IYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYN 294
++ D+ Y ++ R + I+ S G R+G +
Sbjct: 227 IIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKIISS--------GLRIGFLTGPK 278
Query: 295 DKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG 354
+ + TL S L+ S L ++ E ++ + +R+ Y + + +A
Sbjct: 279 PLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM-AHVDRVIDFYSNQKDAILAAA 337
Query: 355 IECLKG-------NAGLFCWMNLSPL--LEEQTREGELALWDSMLHEVKLNISPGSSCHC 405
+ L G AG+F W+ + + ++E E + + ML PG++ +
Sbjct: 338 DKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLML--------PGNAFYV 389
Query: 406 --SEPG-WFRVCFANMSEQTLEVALKRIHNFMQK 436
S P + R F++ S + ++VA + + +++
Sbjct: 390 DSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 136/334 (40%), Gaps = 41/334 (12%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQI 182
+ VT+G+ + ++ +PGD +L+ P Y G + L G I+ + D S I
Sbjct: 111 LCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH-PLGCNIINVASDESG---I 166
Query: 183 TPQALE---AAYKEAESKDMRVRG----VLITNPSNPLGATIQRSVLEELLDFATRKNIH 235
P +L + +K ++K+ + + N +NP G ++ +E+ + A + +
Sbjct: 167 VPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFL 226
Query: 236 LVSDE-IYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYN 294
++ D+ Y ++ R + I+ S G R+G +
Sbjct: 227 IIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISS--------GLRIGFLTGPK 278
Query: 295 DKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG 354
+ + TL S L+ S L ++ E ++ + +R+ Y + + +A
Sbjct: 279 PLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM-AHVDRVIDFYSNQKDAILAAA 337
Query: 355 IECLKG-------NAGLFCWMNLSPL--LEEQTREGELALWDSMLHEVKLNISPGSSCHC 405
+ L G AG+F W+ + + ++E E + + ML PG++ +
Sbjct: 338 DKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLML--------PGNAFYV 389
Query: 406 --SEPG-WFRVCFANMSEQTLEVALKRIHNFMQK 436
S P + R F++ S + ++VA + + +++
Sbjct: 390 DSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 136/334 (40%), Gaps = 41/334 (12%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQI 182
+ VT+G+ + ++ +PGD +L+ P Y G + L G I+ + D S I
Sbjct: 111 LCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH-PLGCNIINVASDESG---I 166
Query: 183 TPQALE---AAYKEAESKDMRVRG----VLITNPSNPLGATIQRSVLEELLDFATRKNIH 235
P +L + +K ++K+ + + N +NP G ++ +E+ + A + +
Sbjct: 167 VPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFL 226
Query: 236 LVSDE-IYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYN 294
++ D+ Y ++ R + I+ S G R+G +
Sbjct: 227 IIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISS--------GLRIGFLTGPK 278
Query: 295 DKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG 354
+ + TL S L+ S L ++ E ++ + +R+ Y + + +A
Sbjct: 279 PLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM-AHVDRVIDFYSNQKDAILAAA 337
Query: 355 IECLKG-------NAGLFCWMNLSPL--LEEQTREGELALWDSMLHEVKLNISPGSSCHC 405
+ L G AG+F W+ + + ++E E + + ML PG++ +
Sbjct: 338 DKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLML--------PGNAFYV 389
Query: 406 --SEPG-WFRVCFANMSEQTLEVALKRIHNFMQK 436
S P + R F++ S + ++VA + + +++
Sbjct: 390 DSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 136/334 (40%), Gaps = 41/334 (12%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQI 182
+ VT+G+ + ++ +PGD +L+ P Y G + L G I+ + D S I
Sbjct: 111 LCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH-PLGCNIINVASDESG---I 166
Query: 183 TPQALE---AAYKEAESKDMRVRG----VLITNPSNPLGATIQRSVLEELLDFATRKNIH 235
P +L + +K ++K+ + + N +NP G ++ +E+ + A + +
Sbjct: 167 VPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFL 226
Query: 236 LVSDE-IYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYN 294
++ D+ Y ++ R + I+ S G R+G +
Sbjct: 227 IIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKIISS--------GLRIGFLTGPK 278
Query: 295 DKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG 354
+ + TL S L+ S L ++ E ++ + +R+ Y + + +A
Sbjct: 279 PLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM-AHVDRVIDFYSNQKDAILAAA 337
Query: 355 IECLKG-------NAGLFCWMNLSPL--LEEQTREGELALWDSMLHEVKLNISPGSSCHC 405
+ L G AG+F W+ + + ++E E + + ML PG++ +
Sbjct: 338 DKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLML--------PGNAFYV 389
Query: 406 --SEPG-WFRVCFANMSEQTLEVALKRIHNFMQK 436
S P + R F++ S + ++VA + + +++
Sbjct: 390 DSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 136/334 (40%), Gaps = 41/334 (12%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQI 182
+ VT+G+ + ++ +PGD +L+ P Y G + L G I+ + D S I
Sbjct: 111 LCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH-PLGCNIINVASDESG---I 166
Query: 183 TPQALE---AAYKEAESKDMRVRG----VLITNPSNPLGATIQRSVLEELLDFATRKNIH 235
P +L + +K ++K+ + + N +NP G ++ +E+ + A + +
Sbjct: 167 VPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFL 226
Query: 236 LVSDE-IYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYN 294
++ D+ Y ++ R + I+ S G R+G +
Sbjct: 227 IIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISS--------GLRIGFLTGPK 278
Query: 295 DKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG 354
+ + TL S L+ S L ++ E ++ + +R+ Y + + +A
Sbjct: 279 PLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM-AHVDRVIDFYSNQKDAILAAA 337
Query: 355 IECLKG-------NAGLFCWMNLSPL--LEEQTREGELALWDSMLHEVKLNISPGSSCHC 405
+ L G AG+F W+ + + ++E E + + ML PG++ +
Sbjct: 338 DKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLML--------PGNAFYV 389
Query: 406 --SEPG-WFRVCFANMSEQTLEVALKRIHNFMQK 436
S P + R F++ S + ++VA + + +++
Sbjct: 390 DSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 136/334 (40%), Gaps = 41/334 (12%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQI 182
+ VT+G+ + ++ +PGD +L+ P Y G + L G I+ + D S I
Sbjct: 113 LCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH-PLGCNIINVASDESG---I 168
Query: 183 TPQALE---AAYKEAESKDMRVRG----VLITNPSNPLGATIQRSVLEELLDFATRKNIH 235
P +L + +K ++K+ + + N +NP G ++ +E+ + A + +
Sbjct: 169 VPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFL 228
Query: 236 LVSDE-IYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYN 294
++ D+ Y ++ R + I+ S G R+G +
Sbjct: 229 IIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXIISS--------GLRIGFLTGPK 280
Query: 295 DKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG 354
+ + TL S L+ S L ++ E ++ + +R+ Y + + +A
Sbjct: 281 PLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM-AHVDRVIDFYSNQKDAILAAA 339
Query: 355 IECLKG-------NAGLFCWMNLSPL--LEEQTREGELALWDSMLHEVKLNISPGSSCHC 405
+ L G AG+F W+ + + ++E E + + ML PG++ +
Sbjct: 340 DKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLML--------PGNAFYV 391
Query: 406 --SEPG-WFRVCFANMSEQTLEVALKRIHNFMQK 436
S P + R F++ S + ++VA + + +++
Sbjct: 392 DSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 425
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 136/334 (40%), Gaps = 41/334 (12%)
Query: 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQI 182
+ VT+G+ + ++ +PGD +L+ P Y G + L G I+ + D S I
Sbjct: 111 LCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH-PLGCNIINVASDESG---I 166
Query: 183 TPQALE---AAYKEAESKDMRVRG----VLITNPSNPLGATIQRSVLEELLDFATRKNIH 235
P +L + +K ++K+ + + N +NP G ++ +E+ + A + +
Sbjct: 167 VPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFL 226
Query: 236 LVSDE-IYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYN 294
++ D+ Y ++ R + I+ S G R+G +
Sbjct: 227 IIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXIISS--------GLRIGFLTGPK 278
Query: 295 DKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG 354
+ + TL S L+ S L ++ E ++ + +R+ Y + + +A
Sbjct: 279 PLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM-AHVDRVIDFYSNQKDAILAAA 337
Query: 355 IECLKG-------NAGLFCWMNLSPL--LEEQTREGELALWDSMLHEVKLNISPGSSCHC 405
+ L G AG+F W+ + + ++E E + + ML PG++ +
Sbjct: 338 DKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLML--------PGNAFYV 389
Query: 406 --SEPG-WFRVCFANMSEQTLEVALKRIHNFMQK 436
S P + R F++ S + ++VA + + +++
Sbjct: 390 DSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 112/288 (38%), Gaps = 34/288 (11%)
Query: 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFI--LADP-----GDALL 148
GL RQA A+++++ G N I+ G+ A L +F+ + +P A++
Sbjct: 67 GLPELRQACANWLKRRYDGLTVDADNEILPVLGSREA--LFSFVQTVLNPVSDGIKPAIV 124
Query: 149 VPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITN 208
P P+Y ++ G IH + P + E R + V + +
Sbjct: 125 SPNPFYQIYEGATLLGGG----EIHFANCPAPSFNPDWRSIS----EEVWKRTKLVFVCS 176
Query: 209 PSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSE 268
P+NP G+ + +E+ D + + SDE Y A+ + +
Sbjct: 177 PNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQA-AAQLGRSRQ 235
Query: 269 RVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFT 328
++ SLS +PG R G V A + +F L +T + A + ++ +
Sbjct: 236 KLLXFTSLSXRSNVPGLRSGF-------VAGDAELLKNFLLY--RTYHGSAXSIPVQRAS 286
Query: 329 ------ENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNL 370
E ++ NR Q++++ +I L+ + +A + W+ +
Sbjct: 287 IAAWDDEQHVIDNRRLYQEKFERVIPILQQV-FDVKLPDASFYIWLKV 333
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
R + +P+NP GA R L +L++FA + +V D Y
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
R + +P+NP GA R L +L++FA + +V D Y
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
R + +P+NP GA R L +L++FA + +V D Y
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242
R + +P+NP GA R L +L++FA + +V D Y
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 180 FQITPQALEAAYKEAE-SKDMRV--------RGVLITNPSNPLGATIQRSVLEELLDFAT 230
++I +A+ A + E +KD+R+ V I NP+NP G +R +E +L
Sbjct: 121 YRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERIL---- 176
Query: 231 RKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTI 290
+ + DE Y K E + ++ + SK L RVG +
Sbjct: 177 KTGAFVALDEAYYEFHGESYVDFL----------KKYENLAVIRTFSKAFSLAAQRVGYV 226
Query: 291 YSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTE---NYIKTNRERLQKRYQMII 347
+ ++K + R+ +S +Q L +++ E +I RER++
Sbjct: 227 VA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKS------ 279
Query: 348 EGLRSAG--IECLKGNAGLFCWM 368
LR G I +GN +F +M
Sbjct: 280 -ALREMGYRITDSRGNF-VFVFM 300
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 180 FQITPQALEAAYKEAE-SKDMRV--------RGVLITNPSNPLGATIQRSVLEELLDFAT 230
++I +A+ A + E +KD+R+ V I NP+NP G +R +E +L
Sbjct: 109 YRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERIL---- 164
Query: 231 RKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTI 290
+ + DE Y K E + ++ + SK L RVG +
Sbjct: 165 KTGAFVALDEAYYEFHGESYVDFL----------KKYENLAVIRTFSKAFSLAAQRVGYV 214
Query: 291 YSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTE---NYIKTNRERLQKRYQMII 347
+ ++K + R+ +S +Q L +++ E +I RER++
Sbjct: 215 VA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKS------ 267
Query: 348 EGLRSAG--IECLKGNAGLFCWM 368
LR G I +GN +F +M
Sbjct: 268 -ALREMGYRITDSRGNF-VFVFM 288
>pdb|1CS1|A Chain A, Cystathionine Gamma-Synthase (Cgs) From Escherichia Coli
pdb|1CS1|B Chain B, Cystathionine Gamma-Synthase (Cgs) From Escherichia Coli
pdb|1CS1|C Chain C, Cystathionine Gamma-Synthase (Cgs) From Escherichia Coli
pdb|1CS1|D Chain D, Cystathionine Gamma-Synthase (Cgs) From Escherichia Coli
Length = 386
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 18/94 (19%)
Query: 124 VVTAGATAANELLTFILADPGDALLVPTPYYPG----FDRDLRWRTGIKIVPIHCDSSNN 179
V+T +A L+T + PGD L+ P Y G FD L R +++ +
Sbjct: 71 VLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFD-SLAKRGCYRVLFVD------ 123
Query: 180 FQITPQALEAAYKEAESKDMRVRGVLITNPSNPL 213
Q QAL AA E + + VL+ +PSNPL
Sbjct: 124 -QGDEQALRAALAE------KPKLVLVESPSNPL 150
>pdb|3BWN|A Chain A, L-Tryptophan Aminotransferase
pdb|3BWN|B Chain B, L-Tryptophan Aminotransferase
pdb|3BWN|D Chain D, L-Tryptophan Aminotransferase
pdb|3BWN|E Chain E, L-Tryptophan Aminotransferase
pdb|3BWN|F Chain F, L-Tryptophan Aminotransferase
Length = 391
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 33/174 (18%)
Query: 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQY 264
L+T+P+NP G TI+ +V+ D + ++ D Y + RQ
Sbjct: 162 LVTSPNNPDG-TIRETVVNRPDDDEAK----VIHDFAYYWPHYTP---------ITRRQD 207
Query: 265 KDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISS-----QTQYLLA 319
D ++++ SK G G R+G + +V A++M + +++S ++Q A
Sbjct: 208 HDI----MLFTFSKITGHAGSRIGWALVKDKEV---AKKMVEYIIVNSIGVSKESQVRTA 260
Query: 320 SMLSNKKFT-------ENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFC 366
+L+ K T EN+ K RE ++ R++ + E ++ + L FC
Sbjct: 261 KILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFC 314
>pdb|1ZFJ|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh; Ec 1.1.1.205)
From Streptococcus Pyogenes
Length = 491
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 378 TREGELALWDSMLHEVKLNISPGSSC 403
T EG AL+D+ + VK+ I PGS C
Sbjct: 284 TAEGARALYDAGVDVVKVGIGPGSIC 309
>pdb|1L9M|A Chain A, Three-Dimensional Structure Of The Human Transglutaminase
3 Enzyme: Binding Of Calcium Ions Change Structure For
Activation
pdb|1L9M|B Chain B, Three-Dimensional Structure Of The Human Transglutaminase
3 Enzyme: Binding Of Calcium Ions Change Structure For
Activation
pdb|1L9N|A Chain A, Three-Dimensional Structure Of The Human Transglutaminase
3 Enzyme: Binding Of Calcium Ions Change Structure For
Activation
pdb|1L9N|B Chain B, Three-Dimensional Structure Of The Human Transglutaminase
3 Enzyme: Binding Of Calcium Ions Change Structure For
Activation
pdb|1NUD|A Chain A, Role Of Calcium Ions In The Activation And Activity Of The
Transglutaminase 3 Enzyme (3 Calciums, Active Form)
pdb|1NUD|B Chain B, Role Of Calcium Ions In The Activation And Activity Of The
Transglutaminase 3 Enzyme (3 Calciums, Active Form)
pdb|1NUF|A Chain A, Role Of Calcium Ions In The Activation And Activity Of The
Transglutaminase 3 Enzyme
pdb|1NUG|A Chain A, Role Of Calcium Ions In The Activation And Activity Of The
Transglutaminase 3 Enzyme (2 Calciums, 1 Mg, Inactive
Form)
pdb|1NUG|B Chain B, Role Of Calcium Ions In The Activation And Activity Of The
Transglutaminase 3 Enzyme (2 Calciums, 1 Mg, Inactive
Form)
Length = 692
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 28 PYFAGWKAYDENPYEES-----TNPSGVIQMGLAENQVSFDLLEEYLEQQPEASTW 78
P + GW+ D P E S P+ VI + + Q++FD+ + E + TW
Sbjct: 344 PSYGGWQVLDATPQERSQGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITW 399
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 69/173 (39%), Gaps = 27/173 (15%)
Query: 180 FQITPQALEAAYKEAE-SKDMRV--------RGVLITNPSNPLGATIQRSVLEELLDFAT 230
++I +A+ A + E +KD+R+ V I NP+NP G +R +E +L
Sbjct: 109 YRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERIL---- 164
Query: 231 RKNIHLVSDEIYXXXXXXXXXXXXXXXXLEARQYKDSERVHIVYSLSKDLGLPGFRVGTI 290
+ + DE Y K E + ++ + SK L RVG +
Sbjct: 165 KTGAFVALDEAYYEFHGESYVDFL----------KKYENLAVIRTFSKAFSLAAQRVGYV 214
Query: 291 YSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTE---NYIKTNRERLQ 340
+ ++K + R+ +S +Q L +++ E +I RER +
Sbjct: 215 VA-SEKFIDAYNRVRLPFNVSYVSQXFAKVALDHREIFEERTKFIVEERERXK 266
>pdb|4F4E|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
pdb|4F4E|B Chain B, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
Length = 420
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 38/170 (22%)
Query: 282 LPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQY---------LLASMLSNKKFTENYI 332
L G RVG + D AR +S + +T Y ++A++L++ + +++
Sbjct: 273 LYGERVGALSIITDSKDEAARVLSQLKRVI-RTNYSNPPTHGGAIVAAVLASPELRASWV 331
Query: 333 KT---NRERLQKRYQMIIEGLRSAGIE----CLKGNAGLFCWMNLSPLLEEQTREGELAL 385
+ R+R++ ++E L++AGIE + G+F + L+ ++ RE E +
Sbjct: 332 QELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTSAQVDRLRE-EFGI 390
Query: 386 WDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435
+ +S G R+C A ++ + L+V I ++
Sbjct: 391 Y---------AVSTG-----------RICVAALNTRNLDVVANAIAAVLK 420
>pdb|4EFF|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei
Length = 420
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 38/170 (22%)
Query: 282 LPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQY---------LLASMLSNKKFTENYI 332
L G RVG + D AR +S + +T Y ++A++L++ + +++
Sbjct: 273 LYGERVGALSIITDSKDEAARVLSQLKRVI-RTNYSNPPTHGGAIVAAVLASPELRASWV 331
Query: 333 KT---NRERLQKRYQMIIEGLRSAGIE----CLKGNAGLFCWMNLSPLLEEQTREGELAL 385
+ R+R++ ++E L++AGIE + G+F + L+ ++ RE E +
Sbjct: 332 QELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTSAQVDRLRE-EFGI 390
Query: 386 WDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435
+ +S G R+C A ++ + L+V I ++
Sbjct: 391 Y---------AVSTG-----------RICVAALNTRNLDVVANAIAAVLK 420
>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3
From Thermoplasma Acidophilum, A Zinc Aminopeptidase In
Three Different Conformations
pdb|1Z5H|A Chain A, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
pdb|1Z5H|B Chain B, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
Length = 780
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 77 TWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK-FDLNRIVVTAGATAANEL 135
++GKGA R + +DY G + FR+ ++ ++ + G A+ DL + +
Sbjct: 350 SYGKGASILR---MIEDYAGYEEFRKGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRV 406
Query: 136 LTFILADPG 144
+ + + +PG
Sbjct: 407 MEYWIKNPG 415
>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
pdb|3Q7J|B Chain B, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
Length = 780
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 77 TWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK-FDLNRIVVTAGATAANEL 135
++GKGA R + +DY G + FR+ ++ ++ + G A+ DL + +
Sbjct: 350 SYGKGASILR---MIEDYAGYEEFRKGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRV 406
Query: 136 LTFILADPG 144
+ + + +PG
Sbjct: 407 MEYWIKNPG 415
>pdb|3CWZ|B Chain B, Strucure Of Rab6(Gtp)-R6ip1 Complex
Length = 384
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 295 DKVVTTARRMSSFTLISSQTQYLLASML--SNKKFTENYIKTNRERLQKRYQMIIEGLRS 352
+K + AR M S T+ + L S++ +N KF E +K R + ++ M++E +
Sbjct: 11 EKYIQEARNMGS-TIRQPKLSNLSPSVIAQTNWKFVEGLLKECRNKTKR---MLVEKMGR 66
Query: 353 AGIECLKGNAGLF------CWMNLSPLLEE------QTREGELALWDSMLH 391
+E G + +L LLE Q ++G+ ALW +LH
Sbjct: 67 EAVELGHGEVNITGVEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLLH 117
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,430,285
Number of Sequences: 62578
Number of extensions: 496730
Number of successful extensions: 1581
Number of sequences better than 100.0: 98
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1437
Number of HSP's gapped (non-prelim): 108
length of query: 442
length of database: 14,973,337
effective HSP length: 102
effective length of query: 340
effective length of database: 8,590,381
effective search space: 2920729540
effective search space used: 2920729540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)