Query 046900
Match_columns 442
No_of_seqs 241 out of 2905
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 05:38:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046900.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046900hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0256 1-aminocyclopropane-1- 100.0 1.9E-73 4.1E-78 519.6 39.5 427 11-438 36-463 (471)
2 PLN02607 1-aminocyclopropane-1 100.0 4.7E-71 1E-75 547.7 48.1 437 1-439 2-440 (447)
3 PLN02376 1-aminocyclopropane-1 100.0 1.4E-69 3.1E-74 542.7 48.4 429 11-439 9-441 (496)
4 PLN02450 1-aminocyclopropane-1 100.0 8E-66 1.7E-70 514.2 46.7 428 14-441 4-435 (468)
5 COG0436 Aspartate/tyrosine/aro 100.0 1.8E-61 3.8E-66 470.1 39.3 357 48-437 28-392 (393)
6 PRK07366 succinyldiaminopimela 100.0 1.1E-55 2.4E-60 434.7 37.0 355 46-434 28-388 (388)
7 PRK07681 aspartate aminotransf 100.0 8.8E-55 1.9E-59 429.5 39.5 350 47-432 31-384 (399)
8 PRK06207 aspartate aminotransf 100.0 2.1E-54 4.5E-59 426.7 39.7 358 47-438 38-404 (405)
9 PRK06855 aminotransferase; Val 100.0 2.8E-54 6E-59 428.8 40.6 366 47-437 31-430 (433)
10 PRK08636 aspartate aminotransf 100.0 3.1E-54 6.8E-59 425.9 40.1 366 46-438 31-402 (403)
11 PLN02187 rooty/superroot1 100.0 5.5E-54 1.2E-58 428.4 40.6 364 47-441 65-443 (462)
12 PTZ00377 alanine aminotransfer 100.0 2.6E-53 5.6E-58 427.5 44.2 349 88-440 108-479 (481)
13 PRK09147 succinyldiaminopimela 100.0 9.2E-54 2E-58 422.0 40.0 353 47-435 28-395 (396)
14 PRK13355 bifunctional HTH-doma 100.0 9.2E-54 2E-58 434.1 40.4 360 47-438 145-516 (517)
15 PLN00175 aminotransferase fami 100.0 6.4E-54 1.4E-58 423.7 38.1 352 48-435 54-412 (413)
16 PLN02231 alanine transaminase 100.0 3.1E-53 6.7E-58 427.0 43.7 349 88-440 161-531 (534)
17 PRK08068 transaminase; Reviewe 100.0 6.8E-54 1.5E-58 421.9 37.9 352 47-433 31-386 (389)
18 PLN02656 tyrosine transaminase 100.0 2.1E-53 4.6E-58 420.3 40.2 367 43-440 26-407 (409)
19 PLN00143 tyrosine/nicotianamin 100.0 2.1E-53 4.6E-58 420.0 40.0 376 32-439 17-407 (409)
20 PRK09148 aminotransferase; Val 100.0 2E-53 4.3E-58 420.0 38.7 361 47-439 29-393 (405)
21 PRK06348 aspartate aminotransf 100.0 2E-53 4.4E-58 417.6 38.6 348 48-433 29-382 (384)
22 PLN00145 tyrosine/nicotianamin 100.0 2.5E-53 5.5E-58 420.9 39.5 364 47-441 51-429 (430)
23 TIGR03540 DapC_direct LL-diami 100.0 2.1E-53 4.6E-58 417.9 38.2 351 47-432 28-382 (383)
24 PRK09276 LL-diaminopimelate am 100.0 2.7E-53 5.9E-58 417.4 38.1 351 47-432 30-384 (385)
25 PTZ00433 tyrosine aminotransfe 100.0 5.1E-53 1.1E-57 418.2 39.6 365 45-438 30-410 (412)
26 PRK07682 hypothetical protein; 100.0 2.5E-53 5.3E-58 416.7 36.3 354 48-437 20-377 (378)
27 TIGR03538 DapC_gpp succinyldia 100.0 8.9E-53 1.9E-57 414.6 40.0 353 47-433 27-392 (393)
28 PRK05942 aspartate aminotransf 100.0 1.7E-52 3.7E-57 412.5 39.4 351 47-433 34-389 (394)
29 PRK07590 L,L-diaminopimelate a 100.0 8.1E-53 1.8E-57 416.6 36.6 351 47-434 33-409 (409)
30 PRK06290 aspartate aminotransf 100.0 1.5E-52 3.2E-57 413.0 38.0 358 45-437 41-406 (410)
31 COG1167 ARO8 Transcriptional r 100.0 2.2E-52 4.8E-57 415.3 38.4 357 48-438 89-457 (459)
32 PRK08960 hypothetical protein; 100.0 6.1E-52 1.3E-56 407.8 39.5 350 48-435 32-386 (387)
33 PRK08361 aspartate aminotransf 100.0 3.1E-52 6.7E-57 410.4 36.9 354 48-436 33-390 (391)
34 PRK07309 aromatic amino acid a 100.0 1.4E-51 3E-56 405.4 41.0 357 48-438 30-390 (391)
35 PRK12414 putative aminotransfe 100.0 3.6E-52 7.8E-57 408.6 36.6 349 48-432 29-383 (384)
36 KOG0257 Kynurenine aminotransf 100.0 1.2E-53 2.7E-58 393.6 24.5 354 53-431 36-414 (420)
37 TIGR03537 DapC succinyldiamino 100.0 8.5E-52 1.8E-56 401.3 37.7 341 50-432 2-349 (350)
38 PRK06107 aspartate aminotransf 100.0 8.5E-52 1.8E-56 408.4 38.0 360 47-437 32-401 (402)
39 COG1168 MalY Bifunctional PLP- 100.0 1.4E-51 3.1E-56 376.3 34.7 356 47-436 24-386 (388)
40 TIGR01264 tyr_amTase_E tyrosin 100.0 2.3E-51 5E-56 405.6 38.3 357 48-437 31-400 (401)
41 PRK05839 hypothetical protein; 100.0 2.8E-51 6.1E-56 400.7 38.1 343 48-435 24-373 (374)
42 PRK06108 aspartate aminotransf 100.0 3.2E-51 6.9E-56 402.8 38.3 352 48-435 24-381 (382)
43 KOG0259 Tyrosine aminotransfer 100.0 2.8E-51 6E-56 371.2 34.0 363 48-441 61-438 (447)
44 PRK07683 aminotransferase A; V 100.0 5.7E-51 1.2E-55 400.5 39.3 354 48-438 28-385 (387)
45 PRK08912 hypothetical protein; 100.0 5.5E-51 1.2E-55 401.2 38.5 354 48-436 26-386 (387)
46 PRK09082 methionine aminotrans 100.0 1.9E-51 4.1E-56 404.0 34.8 350 48-432 30-385 (386)
47 PRK07337 aminotransferase; Val 100.0 6.8E-51 1.5E-55 400.7 38.6 354 47-434 29-387 (388)
48 PRK05957 aspartate aminotransf 100.0 1.3E-50 2.7E-55 398.3 39.5 355 49-439 28-388 (389)
49 PRK15481 transcriptional regul 100.0 2.2E-51 4.8E-56 409.1 34.0 340 48-435 85-430 (431)
50 PRK07324 transaminase; Validat 100.0 5.7E-51 1.2E-55 398.2 36.1 358 32-437 10-371 (373)
51 PRK09265 aminotransferase AlaT 100.0 1.9E-50 4E-55 399.3 39.2 360 47-438 32-403 (404)
52 TIGR01265 tyr_nico_aTase tyros 100.0 2.1E-50 4.6E-55 398.6 38.3 360 47-437 30-402 (403)
53 PRK08175 aminotransferase; Val 100.0 6.1E-50 1.3E-54 394.5 39.8 357 47-436 28-389 (395)
54 PRK07568 aspartate aminotransf 100.0 6.4E-50 1.4E-54 395.4 39.8 355 48-440 30-396 (397)
55 PRK08363 alanine aminotransfer 100.0 5.7E-50 1.2E-54 395.3 38.5 355 47-437 29-395 (398)
56 PRK07550 hypothetical protein; 100.0 7.7E-50 1.7E-54 392.9 39.2 352 47-433 28-384 (386)
57 PRK09275 aspartate aminotransf 100.0 1.6E-50 3.4E-55 401.7 33.1 356 49-440 101-521 (527)
58 TIGR03542 DAPAT_plant LL-diami 100.0 5.2E-50 1.1E-54 395.7 36.1 349 47-433 32-401 (402)
59 PRK06358 threonine-phosphate d 100.0 7.5E-50 1.6E-54 387.7 34.6 333 48-434 19-353 (354)
60 PRK07777 aminotransferase; Val 100.0 2E-49 4.4E-54 390.0 37.9 353 48-434 24-384 (387)
61 PRK05764 aspartate aminotransf 100.0 4.1E-49 8.8E-54 389.1 39.2 359 47-437 30-392 (393)
62 PF00155 Aminotran_1_2: Aminot 100.0 3.3E-50 7.1E-55 393.0 31.1 357 49-430 2-363 (363)
63 PRK07865 N-succinyldiaminopime 100.0 5E-49 1.1E-53 384.1 33.8 335 45-431 24-363 (364)
64 COG0079 HisC Histidinol-phosph 100.0 6.6E-49 1.4E-53 375.3 33.6 330 49-436 23-354 (356)
65 PRK09257 aromatic amino acid a 100.0 8.7E-49 1.9E-53 386.4 35.5 345 48-434 26-396 (396)
66 PRK01533 histidinol-phosphate 100.0 2.5E-49 5.4E-54 384.9 30.7 328 48-438 29-357 (366)
67 PLN02672 methionine S-methyltr 100.0 1.9E-48 4E-53 408.3 39.3 366 43-435 692-1079(1082)
68 PTZ00376 aspartate aminotransf 100.0 1.4E-48 3.1E-53 385.5 35.6 346 48-435 29-402 (404)
69 PRK09440 avtA valine--pyruvate 100.0 1.2E-48 2.6E-53 388.2 35.2 385 13-439 2-414 (416)
70 TIGR03801 asp_4_decarbox aspar 100.0 1E-48 2.2E-53 388.3 33.6 353 49-439 95-519 (521)
71 PRK14809 histidinol-phosphate 100.0 2.4E-48 5.3E-53 378.3 34.7 327 47-435 29-356 (357)
72 TIGR03539 DapC_actino succinyl 100.0 1.4E-48 3.1E-53 379.5 32.9 347 32-430 5-356 (357)
73 PRK08056 threonine-phosphate d 100.0 4.9E-48 1.1E-52 375.7 34.3 335 46-435 18-354 (356)
74 PRK02610 histidinol-phosphate 100.0 8.5E-48 1.8E-52 376.3 36.2 341 49-437 29-372 (374)
75 PRK06425 histidinol-phosphate 100.0 7.7E-48 1.7E-52 370.5 34.5 315 49-434 17-331 (332)
76 PRK05166 histidinol-phosphate 100.0 7.1E-48 1.5E-52 376.7 34.4 334 47-434 35-369 (371)
77 PLN02368 alanine transaminase 100.0 6.7E-48 1.5E-52 377.4 34.2 282 88-372 100-397 (407)
78 PRK07392 threonine-phosphate d 100.0 1.3E-47 2.9E-52 373.4 36.1 334 45-434 19-357 (360)
79 PRK06836 aspartate aminotransf 100.0 9.2E-47 2E-51 371.6 40.3 345 48-438 33-393 (394)
80 PRK03158 histidinol-phosphate 100.0 1.4E-47 3E-52 373.6 32.1 328 49-433 30-358 (359)
81 PRK08637 hypothetical protein; 100.0 1.3E-46 2.9E-51 369.7 38.4 344 60-437 20-387 (388)
82 PRK04781 histidinol-phosphate 100.0 1.4E-46 3E-51 366.1 36.1 327 49-434 32-361 (364)
83 PLN03026 histidinol-phosphate 100.0 1.6E-46 3.5E-51 367.5 36.1 328 47-433 51-379 (380)
84 PRK03317 histidinol-phosphate 100.0 2.4E-46 5.2E-51 365.8 35.5 338 49-437 27-365 (368)
85 PRK08153 histidinol-phosphate 100.0 2.5E-46 5.4E-51 365.1 34.3 334 49-439 33-368 (369)
86 PRK01688 histidinol-phosphate 100.0 1.3E-46 2.8E-51 364.7 30.6 320 49-430 29-350 (351)
87 PLN02397 aspartate transaminas 100.0 1.4E-45 3E-50 365.2 37.7 346 47-435 47-420 (423)
88 PRK04870 histidinol-phosphate 100.0 7.2E-46 1.6E-50 360.9 33.6 329 47-434 25-356 (356)
89 PRK07908 hypothetical protein; 100.0 1.5E-45 3.3E-50 357.6 34.4 325 47-435 21-346 (349)
90 PRK09105 putative aminotransfe 100.0 1.3E-45 2.9E-50 359.5 33.7 325 48-434 43-368 (370)
91 PRK06225 aspartate aminotransf 100.0 5.9E-45 1.3E-49 357.5 36.0 348 46-439 26-379 (380)
92 PRK02731 histidinol-phosphate 100.0 3.5E-45 7.5E-50 357.8 34.2 334 47-435 31-365 (367)
93 PRK05387 histidinol-phosphate 100.0 3.9E-45 8.5E-50 355.6 33.7 325 48-435 24-352 (353)
94 PRK06959 putative threonine-ph 100.0 2E-45 4.4E-50 353.9 30.3 312 47-439 23-336 (339)
95 PRK04635 histidinol-phosphate 100.0 2.3E-44 5E-49 349.7 32.2 319 48-432 31-351 (354)
96 PRK05664 threonine-phosphate d 100.0 1.6E-44 3.4E-49 347.1 30.2 310 47-436 19-328 (330)
97 PRK03321 putative aminotransfe 100.0 2E-44 4.4E-49 350.3 31.1 335 41-435 15-350 (352)
98 PRK08354 putative aminotransfe 100.0 1.2E-43 2.6E-48 338.4 34.9 308 42-433 2-309 (311)
99 PRK14807 histidinol-phosphate 100.0 1.4E-43 3E-48 343.8 35.7 326 49-434 23-350 (351)
100 KOG0634 Aromatic amino acid am 100.0 1.6E-43 3.4E-48 326.4 32.3 345 87-439 92-469 (472)
101 PRK00950 histidinol-phosphate 100.0 1.7E-43 3.6E-48 345.2 33.2 326 47-434 33-360 (361)
102 PRK14808 histidinol-phosphate 100.0 3.1E-43 6.6E-48 338.5 33.8 317 46-433 17-334 (335)
103 TIGR01141 hisC histidinol-phos 100.0 5E-43 1.1E-47 339.9 32.6 327 47-431 18-346 (346)
104 TIGR01140 L_thr_O3P_dcar L-thr 100.0 4.7E-43 1E-47 337.1 31.6 313 47-430 16-329 (330)
105 PRK03967 histidinol-phosphate 100.0 1.2E-42 2.6E-47 335.0 32.2 317 48-437 18-335 (337)
106 KOG0258 Alanine aminotransfera 100.0 6.1E-39 1.3E-43 291.5 29.0 343 87-437 105-470 (475)
107 COG3977 Alanine-alpha-ketoisov 100.0 1.9E-36 4.1E-41 266.4 26.6 372 32-440 15-415 (417)
108 cd00609 AAT_like Aspartate ami 100.0 6.9E-35 1.5E-39 283.1 36.0 318 88-431 29-349 (350)
109 KOG0633 Histidinol phosphate a 100.0 2E-35 4.4E-40 255.0 23.7 306 90-433 65-374 (375)
110 PRK13238 tnaA tryptophanase/L- 100.0 1.5E-34 3.1E-39 286.9 33.0 318 89-436 72-433 (460)
111 TIGR03576 pyridox_MJ0158 pyrid 100.0 3.2E-32 6.9E-37 261.7 32.2 287 96-434 51-345 (346)
112 PRK10534 L-threonine aldolase; 100.0 1.7E-31 3.7E-36 257.7 29.0 324 50-435 1-332 (333)
113 PRK06939 2-amino-3-ketobutyrat 100.0 2E-30 4.3E-35 256.5 32.4 346 46-437 40-394 (397)
114 cd00617 Tnase_like Tryptophana 100.0 2.6E-30 5.5E-35 253.0 32.2 318 89-436 47-408 (431)
115 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 6.4E-30 1.4E-34 249.7 32.0 300 97-436 53-368 (370)
116 PLN02822 serine palmitoyltrans 100.0 1.2E-29 2.5E-34 254.1 33.3 356 46-438 107-479 (481)
117 TIGR00858 bioF 8-amino-7-oxono 100.0 8.8E-30 1.9E-34 248.5 31.4 292 97-431 63-360 (360)
118 TIGR01822 2am3keto_CoA 2-amino 100.0 1.4E-29 3.1E-34 249.9 32.8 298 98-437 86-390 (393)
119 TIGR01825 gly_Cac_T_rel pyrido 100.0 3.9E-29 8.5E-34 246.1 33.9 343 46-437 31-382 (385)
120 PLN02483 serine palmitoyltrans 100.0 6.5E-29 1.4E-33 249.2 34.8 312 88-438 139-468 (489)
121 PLN02721 threonine aldolase 100.0 8.4E-29 1.8E-33 241.0 33.3 334 48-435 5-351 (353)
122 PRK10874 cysteine sulfinate de 100.0 4.4E-29 9.6E-34 246.9 30.5 295 97-437 65-399 (401)
123 TIGR03392 FeS_syn_CsdA cystein 100.0 1.2E-28 2.5E-33 243.6 33.2 296 96-437 61-396 (398)
124 PRK05958 8-amino-7-oxononanoat 100.0 1.8E-28 3.9E-33 241.5 33.0 341 46-434 37-385 (385)
125 cd00378 SHMT Serine-glycine hy 100.0 1.9E-28 4.1E-33 242.6 32.0 346 49-436 20-385 (402)
126 PF12897 Aminotran_MocR: Alani 100.0 2.8E-28 6.1E-33 224.0 30.3 322 87-436 60-415 (425)
127 cd06502 TA_like Low-specificit 100.0 2.3E-28 5E-33 236.4 30.5 300 90-432 27-337 (338)
128 PRK02627 acetylornithine amino 100.0 1.5E-28 3.4E-33 242.8 29.1 339 44-437 35-395 (396)
129 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 8.5E-28 1.9E-32 234.3 31.2 300 96-434 45-360 (361)
130 PRK13392 5-aminolevulinate syn 100.0 7.3E-28 1.6E-32 238.7 31.1 304 91-437 87-398 (410)
131 TIGR00707 argD acetylornithine 100.0 2.3E-27 4.9E-32 233.1 30.6 330 46-434 25-379 (379)
132 cd06454 KBL_like KBL_like; thi 100.0 4.2E-27 9E-32 228.7 31.1 295 97-433 48-348 (349)
133 cd06451 AGAT_like Alanine-glyo 100.0 1.1E-26 2.3E-31 226.4 33.9 293 98-434 35-355 (356)
134 PRK02948 cysteine desulfurase; 100.0 1.5E-27 3.2E-32 234.5 25.0 297 97-439 45-377 (381)
135 TIGR01979 sufS cysteine desulf 100.0 2.4E-26 5.2E-31 227.7 32.1 294 96-437 63-402 (403)
136 PRK07049 methionine gamma-lyas 100.0 3.4E-26 7.3E-31 225.8 32.5 226 88-353 77-311 (427)
137 PLN02855 Bifunctional selenocy 100.0 2.2E-26 4.8E-31 229.0 31.5 297 96-439 77-421 (424)
138 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 7.6E-26 1.7E-30 220.3 33.6 294 97-434 33-355 (355)
139 PRK01278 argD acetylornithine 100.0 2E-26 4.2E-31 227.0 29.4 294 99-436 73-388 (389)
140 COG1448 TyrB Aspartate/tyrosin 100.0 5.2E-26 1.1E-30 208.9 29.4 341 49-433 27-395 (396)
141 TIGR01821 5aminolev_synth 5-am 100.0 6.7E-26 1.4E-30 224.2 32.4 299 96-437 91-397 (402)
142 PRK09295 bifunctional cysteine 100.0 3.2E-26 7E-31 226.7 30.2 291 97-435 69-403 (406)
143 PRK09064 5-aminolevulinate syn 100.0 5.1E-26 1.1E-30 225.4 31.3 302 94-438 90-399 (407)
144 TIGR01976 am_tr_V_VC1184 cyste 100.0 3.4E-26 7.4E-31 226.2 30.1 288 98-430 63-397 (397)
145 PRK03244 argD acetylornithine 100.0 1.2E-26 2.5E-31 229.3 26.5 334 44-437 39-395 (398)
146 PRK07179 hypothetical protein; 100.0 9.2E-26 2E-30 223.4 32.7 290 96-437 100-399 (407)
147 TIGR02326 transamin_PhnW 2-ami 100.0 2.1E-25 4.6E-30 217.7 32.3 294 98-435 38-361 (363)
148 PRK13479 2-aminoethylphosphona 99.9 5E-25 1.1E-29 215.6 32.4 298 97-437 39-364 (368)
149 PLN02242 methionine gamma-lyas 99.9 3.1E-25 6.6E-30 218.2 30.7 287 96-438 77-417 (418)
150 cd06450 DOPA_deC_like DOPA dec 99.9 1E-25 2.3E-30 218.5 26.9 298 90-432 29-344 (345)
151 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 3.6E-25 7.9E-30 217.4 31.0 308 95-438 63-383 (387)
152 TIGR03403 nifS_epsilon cystein 99.9 2.6E-25 5.6E-30 218.6 29.8 305 90-438 35-377 (382)
153 cd06453 SufS_like Cysteine des 99.9 1.2E-25 2.7E-30 220.3 26.5 290 95-430 43-373 (373)
154 cd00610 OAT_like Acetyl ornith 99.9 3.4E-25 7.4E-30 220.2 29.6 346 45-434 33-413 (413)
155 cd00613 GDC-P Glycine cleavage 99.9 5.7E-25 1.2E-29 217.5 30.1 326 49-430 21-398 (398)
156 PLN02409 serine--glyoxylate am 99.9 2E-24 4.3E-29 212.9 33.0 309 95-438 38-374 (401)
157 PRK13393 5-aminolevulinate syn 99.9 3.1E-24 6.6E-29 212.4 33.2 298 97-437 92-397 (406)
158 PRK00011 glyA serine hydroxyme 99.9 2.2E-24 4.8E-29 214.3 32.1 345 48-436 25-389 (416)
159 TIGR03402 FeS_nifS cysteine de 99.9 7.7E-25 1.7E-29 215.1 27.6 296 97-439 44-375 (379)
160 TIGR03812 tyr_de_CO2_Arch tyro 99.9 8.1E-24 1.8E-28 207.5 33.2 298 96-432 56-372 (373)
161 PRK08247 cystathionine gamma-s 99.9 6.4E-25 1.4E-29 213.5 25.0 289 88-436 46-364 (366)
162 PRK05093 argD bifunctional N-s 99.9 3.4E-24 7.4E-29 211.8 30.0 274 120-436 97-400 (403)
163 PRK13520 L-tyrosine decarboxyl 99.9 1E-23 2.2E-28 206.7 33.0 299 96-435 56-370 (371)
164 PRK02936 argD acetylornithine 99.9 6.7E-24 1.5E-28 208.2 30.6 333 44-434 25-377 (377)
165 TIGR01977 am_tr_V_EF2568 cyste 99.9 4.6E-24 1E-28 209.4 28.2 295 95-432 44-375 (376)
166 PLN03227 serine palmitoyltrans 99.9 4.8E-23 1E-27 202.0 33.3 316 90-438 38-384 (392)
167 PRK06234 methionine gamma-lyas 99.9 2.7E-23 5.9E-28 204.1 31.1 287 90-436 60-397 (400)
168 COG0156 BioF 7-keto-8-aminopel 99.9 3.1E-23 6.7E-28 198.0 29.7 302 91-433 80-387 (388)
169 TIGR02080 O_succ_thio_ly O-suc 99.9 3.8E-23 8.3E-28 201.5 29.7 218 88-353 45-268 (382)
170 PRK04073 rocD ornithine--oxo-a 99.9 1.4E-23 3.1E-28 206.9 26.8 269 120-434 97-395 (396)
171 PRK00451 glycine dehydrogenase 99.9 2.6E-23 5.7E-28 208.4 29.1 291 98-434 108-446 (447)
172 TIGR01437 selA_rel uncharacter 99.9 6.9E-23 1.5E-27 198.9 30.8 285 96-434 42-363 (363)
173 PRK08045 cystathionine gamma-s 99.9 9.9E-23 2.2E-27 198.7 31.1 218 88-353 46-269 (386)
174 TIGR00713 hemL glutamate-1-sem 99.9 2.6E-23 5.7E-28 206.9 26.9 347 43-436 43-422 (423)
175 PRK06767 methionine gamma-lyas 99.9 6.9E-23 1.5E-27 200.6 29.0 290 88-435 55-384 (386)
176 PRK14012 cysteine desulfurase; 99.9 3.8E-23 8.1E-28 204.6 27.4 294 96-438 50-381 (404)
177 PRK06460 hypothetical protein; 99.9 4.9E-23 1.1E-27 200.6 27.5 212 95-353 45-261 (376)
178 PRK08133 O-succinylhomoserine 99.9 9.8E-23 2.1E-27 199.5 29.4 208 97-353 63-277 (390)
179 PRK04260 acetylornithine amino 99.9 8.9E-23 1.9E-27 199.9 28.1 290 97-433 68-374 (375)
180 PRK08088 4-aminobutyrate amino 99.9 3E-22 6.4E-27 198.9 32.1 311 100-437 85-424 (425)
181 PRK12381 bifunctional succinyl 99.9 1.6E-22 3.5E-27 199.7 29.5 347 40-440 31-403 (406)
182 PRK07505 hypothetical protein; 99.9 3.3E-22 7.2E-27 197.6 31.7 292 97-436 93-399 (402)
183 COG0520 csdA Selenocysteine ly 99.9 2.7E-22 5.8E-27 195.3 29.4 292 96-435 67-404 (405)
184 TIGR02006 IscS cysteine desulf 99.9 1.6E-22 3.4E-27 200.0 27.8 293 96-438 48-379 (402)
185 cd00614 CGS_like CGS_like: Cys 99.9 5E-22 1.1E-26 193.7 29.1 210 96-353 41-257 (369)
186 PRK08249 cystathionine gamma-s 99.9 5.8E-22 1.3E-26 194.1 29.6 209 96-353 65-280 (398)
187 PRK08776 cystathionine gamma-s 99.9 1.1E-21 2.3E-26 192.5 31.4 209 97-353 62-277 (405)
188 PRK07504 O-succinylhomoserine 99.9 4.2E-22 9.1E-27 195.4 28.2 217 89-353 60-282 (398)
189 PRK08861 cystathionine gamma-s 99.9 7.1E-22 1.5E-26 192.1 29.3 218 88-353 47-270 (388)
190 PLN02955 8-amino-7-oxononanoat 99.9 1.3E-21 2.7E-26 191.2 30.3 291 96-438 148-463 (476)
191 PRK07582 cystathionine gamma-l 99.9 9.2E-22 2E-26 191.2 29.3 214 88-353 45-264 (366)
192 TIGR02379 ECA_wecE TDP-4-keto- 99.9 5.6E-22 1.2E-26 193.1 27.3 172 98-305 30-207 (376)
193 TIGR01328 met_gam_lyase methio 99.9 9.3E-22 2E-26 192.5 27.4 215 89-353 54-277 (391)
194 PRK07811 cystathionine gamma-s 99.9 2.2E-21 4.8E-26 189.8 30.0 212 95-353 61-278 (388)
195 PRK07503 methionine gamma-lyas 99.9 2.5E-21 5.5E-26 190.2 30.5 214 90-353 61-283 (403)
196 PRK07810 O-succinylhomoserine 99.9 1E-21 2.2E-26 192.8 27.4 216 89-353 65-287 (403)
197 PRK00854 rocD ornithine--oxo-a 99.9 8.2E-22 1.8E-26 195.0 27.1 272 120-435 98-400 (401)
198 PLN02994 1-aminocyclopropane-1 99.9 7.3E-24 1.6E-28 177.4 9.8 145 12-156 7-153 (153)
199 TIGR03235 DNA_S_dndA cysteine 99.9 1.6E-22 3.4E-27 196.8 20.5 281 97-425 44-347 (353)
200 PLN00144 acetylornithine trans 99.9 1.2E-21 2.7E-26 191.4 26.7 295 99-437 57-381 (382)
201 PRK07050 cystathionine beta-ly 99.9 2.3E-21 5.1E-26 189.8 28.2 291 89-436 60-391 (394)
202 PTZ00125 ornithine aminotransf 99.9 4.6E-21 9.9E-26 189.7 28.9 286 120-438 88-397 (400)
203 PRK05937 8-amino-7-oxononanoat 99.9 1.3E-20 2.7E-25 184.2 31.5 294 95-440 56-354 (370)
204 TIGR01325 O_suc_HS_sulf O-succ 99.9 5.1E-21 1.1E-25 187.1 28.5 215 89-353 49-270 (380)
205 COG1104 NifS Cysteine sulfinat 99.9 3.1E-21 6.7E-26 181.1 25.4 300 96-440 45-381 (386)
206 PRK08574 cystathionine gamma-s 99.9 8.1E-21 1.8E-25 185.4 28.6 211 96-353 54-269 (385)
207 PRK07269 cystathionine gamma-s 99.9 3.7E-21 8.1E-26 186.2 24.9 286 89-435 49-363 (364)
208 TIGR03246 arg_catab_astC succi 99.9 3.2E-20 6.8E-25 182.9 31.2 333 43-436 30-395 (397)
209 PRK05968 hypothetical protein; 99.9 2.2E-20 4.9E-25 182.8 27.8 281 97-437 65-387 (389)
210 PLN02651 cysteine desulfurase 99.9 6.9E-21 1.5E-25 185.9 24.1 280 97-424 45-364 (364)
211 PRK09028 cystathionine beta-ly 99.9 4.9E-20 1.1E-24 179.0 28.3 215 90-353 54-277 (394)
212 PRK04366 glycine dehydrogenase 99.9 1E-19 2.3E-24 182.7 31.4 315 88-438 99-450 (481)
213 PRK08064 cystathionine beta-ly 99.9 6.8E-20 1.5E-24 179.5 29.2 210 97-353 56-270 (390)
214 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 7E-20 1.5E-24 179.1 29.1 292 97-434 29-374 (375)
215 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 5.9E-20 1.3E-24 181.6 28.5 164 89-294 52-219 (418)
216 TIGR01329 cysta_beta_ly_E cyst 99.9 1.4E-19 3.1E-24 176.5 30.4 267 121-436 63-375 (378)
217 PRK06702 O-acetylhomoserine am 99.9 5.1E-20 1.1E-24 180.4 27.3 210 97-353 63-310 (432)
218 PRK08248 O-acetylhomoserine am 99.9 1.4E-19 2.9E-24 178.8 30.1 156 97-293 66-225 (431)
219 TIGR00700 GABAtrnsam 4-aminobu 99.9 2.1E-19 4.6E-24 178.1 31.4 311 99-435 76-419 (420)
220 PRK06918 4-aminobutyrate amino 99.9 6.7E-19 1.5E-23 175.9 34.0 361 40-439 46-446 (451)
221 cd00615 Orn_deC_like Ornithine 99.9 1.3E-20 2.7E-25 178.3 20.4 166 97-291 61-231 (294)
222 PRK07671 cystathionine beta-ly 99.9 1.9E-19 4.2E-24 175.4 28.6 214 90-353 46-266 (377)
223 PRK06084 O-acetylhomoserine am 99.9 2.4E-19 5.1E-24 176.9 28.9 157 97-293 60-219 (425)
224 PRK09792 4-aminobutyrate trans 99.9 5.5E-19 1.2E-23 174.9 31.0 313 98-435 82-420 (421)
225 PRK04612 argD acetylornithine 99.9 9.9E-19 2.1E-23 171.9 32.2 348 41-441 33-408 (408)
226 PRK05939 hypothetical protein; 99.9 3.7E-19 8.1E-24 174.1 28.0 155 98-293 50-207 (397)
227 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.4E-19 5.1E-24 174.5 26.6 285 95-431 18-352 (352)
228 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3.2E-19 6.9E-24 174.6 27.3 170 96-303 34-205 (379)
229 PRK08360 4-aminobutyrate amino 99.9 2.8E-18 6E-23 170.4 33.8 360 40-440 33-430 (443)
230 PLN02624 ornithine-delta-amino 99.9 1.8E-18 4E-23 173.3 32.7 285 120-436 132-444 (474)
231 TIGR01324 cysta_beta_ly_B cyst 99.9 5E-19 1.1E-23 172.1 27.3 280 98-435 53-375 (377)
232 PLN02509 cystathionine beta-ly 99.9 9E-19 1.9E-23 173.2 29.4 218 89-353 125-349 (464)
233 KOG1359 Glycine C-acetyltransf 99.9 6.9E-20 1.5E-24 161.7 18.9 340 48-438 67-414 (417)
234 TIGR01885 Orn_aminotrans ornit 99.8 1E-18 2.3E-23 172.6 29.6 277 120-434 94-400 (401)
235 PRK06777 4-aminobutyrate amino 99.8 2.8E-18 6.1E-23 169.8 31.2 357 40-435 32-420 (421)
236 PRK00062 glutamate-1-semialdeh 99.8 1.3E-18 2.8E-23 172.7 28.7 347 44-437 46-425 (426)
237 KOG1412 Aspartate aminotransfe 99.8 3.7E-18 8.1E-23 151.9 27.7 355 40-437 23-406 (410)
238 PRK05967 cystathionine beta-ly 99.8 3.4E-18 7.4E-23 165.9 29.5 212 97-353 62-280 (395)
239 PF00266 Aminotran_5: Aminotra 99.8 1.2E-18 2.7E-23 170.5 26.8 284 97-426 45-371 (371)
240 TIGR03588 PseC UDP-4-keto-6-de 99.8 3.4E-18 7.4E-23 167.8 29.8 295 95-434 29-380 (380)
241 PRK06176 cystathionine gamma-s 99.8 2.1E-18 4.5E-23 168.2 27.5 208 97-353 52-266 (380)
242 PRK13034 serine hydroxymethylt 99.8 8E-18 1.7E-22 166.3 31.4 340 49-436 29-392 (416)
243 TIGR03531 selenium_SpcS O-phos 99.8 9.2E-18 2E-22 164.3 31.2 310 97-433 103-443 (444)
244 TIGR01814 kynureninase kynuren 99.8 4.4E-18 9.6E-23 168.5 28.7 275 118-434 84-405 (406)
245 TIGR02618 tyr_phenol_ly tyrosi 99.8 9.6E-18 2.1E-22 161.9 29.2 322 90-436 66-426 (450)
246 PRK07495 4-aminobutyrate amino 99.8 4.4E-17 9.5E-22 161.1 33.7 359 40-438 32-423 (425)
247 PRK13580 serine hydroxymethylt 99.8 2.5E-17 5.5E-22 161.3 30.7 350 48-437 49-446 (493)
248 COG4992 ArgD Ornithine/acetylo 99.8 3.3E-17 7.2E-22 153.8 29.1 345 41-441 35-403 (404)
249 PRK05994 O-acetylhomoserine am 99.8 2.2E-17 4.7E-22 163.4 29.0 155 97-292 65-223 (427)
250 PRK08117 4-aminobutyrate amino 99.8 7E-17 1.5E-21 160.9 32.4 357 44-439 39-432 (433)
251 COG2008 GLY1 Threonine aldolas 99.8 1.9E-17 4E-22 152.4 25.6 330 51-434 2-341 (342)
252 TIGR02407 ectoine_ectB diamino 99.8 5.4E-17 1.2E-21 160.2 30.4 355 40-435 27-411 (412)
253 PTZ00094 serine hydroxymethylt 99.8 6.3E-17 1.4E-21 161.9 30.9 284 118-436 95-408 (452)
254 PRK13237 tyrosine phenol-lyase 99.8 2.3E-16 4.9E-21 152.9 32.3 321 90-436 73-433 (460)
255 PRK08134 O-acetylhomoserine am 99.8 3.6E-17 7.8E-22 161.5 27.2 155 97-292 66-224 (433)
256 PF04864 Alliinase_C: Allinase 99.8 3.1E-18 6.7E-23 156.2 17.5 288 97-433 45-362 (363)
257 KOG1549 Cysteine desulfurase N 99.8 3.2E-17 6.9E-22 154.7 24.3 168 93-294 83-257 (428)
258 KOG1411 Aspartate aminotransfe 99.8 9.9E-18 2.1E-22 151.3 19.1 347 42-433 47-422 (427)
259 COG0075 Serine-pyruvate aminot 99.8 6.7E-16 1.5E-20 146.4 32.4 303 98-439 37-366 (383)
260 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 1.5E-16 3.2E-21 154.0 28.5 277 98-435 58-386 (386)
261 COG1103 Archaea-specific pyrid 99.8 6.1E-17 1.3E-21 141.7 23.1 304 96-437 62-381 (382)
262 PRK07812 O-acetylhomoserine am 99.8 9.9E-17 2.1E-21 158.3 27.7 156 97-292 71-230 (436)
263 PLN02414 glycine dehydrogenase 99.8 2.9E-16 6.2E-21 166.2 31.3 318 87-439 553-910 (993)
264 PRK06058 4-aminobutyrate amino 99.8 4.8E-16 1E-20 155.0 31.3 354 44-436 52-442 (443)
265 PRK09264 diaminobutyrate--2-ox 99.8 6.6E-16 1.4E-20 153.2 30.8 360 40-439 31-419 (425)
266 cd01494 AAT_I Aspartate aminot 99.8 1.2E-17 2.6E-22 144.5 15.5 166 98-292 3-169 (170)
267 PRK15407 lipopolysaccharide bi 99.8 3.3E-16 7.2E-21 155.2 25.9 169 97-304 65-245 (438)
268 PRK05964 adenosylmethionine--8 99.8 1.1E-15 2.3E-20 152.0 29.1 350 40-436 34-422 (423)
269 PRK03715 argD acetylornithine 99.7 1.1E-15 2.4E-20 150.0 27.7 338 44-437 32-394 (395)
270 PLN02724 Molybdenum cofactor s 99.7 6.4E-16 1.4E-20 164.3 27.9 308 97-435 80-487 (805)
271 PRK08114 cystathionine beta-ly 99.7 2.8E-15 6.1E-20 145.4 29.5 208 97-353 64-280 (395)
272 KOG1368 Threonine aldolase [Am 99.7 1.7E-15 3.7E-20 134.4 25.2 329 50-432 23-364 (384)
273 COG0001 HemL Glutamate-1-semia 99.7 4.3E-15 9.3E-20 141.1 29.0 340 44-439 49-431 (432)
274 PLN03226 serine hydroxymethylt 99.7 6.4E-15 1.4E-19 147.0 31.8 346 49-436 35-419 (475)
275 COG0626 MetC Cystathionine bet 99.7 5.7E-15 1.2E-19 141.2 29.4 283 97-436 65-394 (396)
276 PLN02880 tyrosine decarboxylas 99.7 5.4E-15 1.2E-19 148.3 30.6 328 91-439 114-487 (490)
277 PRK06541 hypothetical protein; 99.7 5.6E-15 1.2E-19 147.4 30.5 359 41-440 45-459 (460)
278 PRK02769 histidine decarboxyla 99.7 1E-14 2.2E-19 141.7 30.8 290 97-436 63-372 (380)
279 COG0399 WecE Predicted pyridox 99.7 1.9E-15 4.2E-20 143.6 24.7 170 97-305 36-209 (374)
280 COG0112 GlyA Glycine/serine hy 99.7 9.7E-15 2.1E-19 135.4 28.5 348 49-436 27-390 (413)
281 TIGR00709 dat 2,4-diaminobutyr 99.7 2.2E-14 4.8E-19 142.9 33.5 362 40-437 31-436 (442)
282 PRK05613 O-acetylhomoserine am 99.7 7.9E-15 1.7E-19 144.8 30.0 156 97-292 71-230 (437)
283 PLN02590 probable tyrosine dec 99.7 2.5E-14 5.3E-19 143.6 33.5 329 90-438 161-534 (539)
284 PRK05769 4-aminobutyrate amino 99.7 2.1E-14 4.5E-19 142.8 31.4 310 99-436 97-439 (441)
285 COG0160 GabT 4-aminobutyrate a 99.7 2.9E-14 6.2E-19 138.1 31.2 359 40-437 48-446 (447)
286 PRK06434 cystathionine gamma-l 99.7 6.9E-15 1.5E-19 142.8 27.0 206 97-353 66-278 (384)
287 PRK08593 4-aminobutyrate amino 99.7 3.1E-14 6.7E-19 141.8 32.3 312 99-439 85-432 (445)
288 PLN02271 serine hydroxymethylt 99.7 3.4E-14 7.4E-19 140.0 31.1 305 91-435 186-539 (586)
289 PRK11522 putrescine--2-oxoglut 99.7 2.4E-14 5.2E-19 142.6 30.7 349 45-439 79-454 (459)
290 TIGR01364 serC_1 phosphoserine 99.7 1E-14 2.3E-19 140.6 26.2 285 99-437 37-349 (349)
291 PF00464 SHMT: Serine hydroxym 99.7 7.2E-15 1.6E-19 141.1 24.6 338 49-427 21-396 (399)
292 TIGR03372 putres_am_tran putre 99.7 3.5E-14 7.6E-19 140.5 30.0 346 44-434 71-442 (442)
293 PLN03032 serine decarboxylase; 99.7 2.8E-14 6E-19 137.7 28.5 287 96-432 63-372 (374)
294 TIGR01788 Glu-decarb-GAD gluta 99.7 2.6E-14 5.6E-19 140.8 28.0 311 97-437 78-430 (431)
295 cd00611 PSAT_like Phosphoserin 99.7 7E-15 1.5E-19 142.8 22.9 280 97-433 46-353 (355)
296 PRK05639 4-aminobutyrate amino 99.7 1.2E-13 2.6E-18 137.7 32.1 360 41-438 46-445 (457)
297 PRK03080 phosphoserine aminotr 99.7 2.6E-14 5.6E-19 139.9 25.9 287 97-439 50-376 (378)
298 PF01041 DegT_DnrJ_EryC1: DegT 99.7 1E-14 2.3E-19 142.1 22.9 284 97-431 27-363 (363)
299 KOG1360 5-aminolevulinate synt 99.7 6.2E-14 1.3E-18 129.2 24.6 300 97-438 218-526 (570)
300 PRK07678 aminotransferase; Val 99.7 1.6E-13 3.4E-18 137.0 29.6 314 99-437 89-450 (451)
301 KOG0053 Cystathionine beta-lya 99.7 1E-13 2.2E-18 130.9 25.9 170 120-319 92-267 (409)
302 PRK12403 putative aminotransfe 99.6 5.9E-13 1.3E-17 133.1 31.4 309 98-438 97-454 (460)
303 PLN02760 4-aminobutyrate:pyruv 99.6 5.6E-13 1.2E-17 134.1 31.2 352 44-440 85-495 (504)
304 PRK05965 hypothetical protein; 99.6 4.4E-13 9.6E-18 133.9 30.2 311 99-439 90-450 (459)
305 PRK05355 3-phosphoserine/phosp 99.6 4.9E-14 1.1E-18 136.6 22.6 286 99-437 48-359 (360)
306 PRK04311 selenocysteine syntha 99.6 6.5E-13 1.4E-17 131.7 30.6 298 97-435 129-463 (464)
307 PLN02482 glutamate-1-semialdeh 99.6 6.6E-13 1.4E-17 132.5 30.4 342 44-436 95-473 (474)
308 PLN02263 serine decarboxylase 99.6 7.3E-13 1.6E-17 129.8 29.8 291 96-436 130-443 (470)
309 PRK07482 hypothetical protein; 99.6 7.4E-13 1.6E-17 132.4 30.6 356 41-437 43-455 (461)
310 PRK07046 aminotransferase; Val 99.6 8.4E-13 1.8E-17 131.5 30.2 295 98-437 114-451 (453)
311 PRK06943 adenosylmethionine--8 99.6 1.3E-12 2.9E-17 130.1 31.7 349 43-437 49-447 (453)
312 PRK06082 4-aminobutyrate amino 99.6 1.3E-12 2.9E-17 130.4 31.6 309 99-440 113-455 (459)
313 PRK00615 glutamate-1-semialdeh 99.6 5.7E-13 1.2E-17 131.8 28.4 346 42-437 47-429 (433)
314 PRK06917 hypothetical protein; 99.6 2.6E-12 5.7E-17 128.0 33.2 364 40-439 23-440 (447)
315 PRK04013 argD acetylornithine/ 99.6 2.4E-13 5.1E-18 131.4 24.9 265 120-437 81-361 (364)
316 PRK13360 omega amino acid--pyr 99.6 1E-12 2.2E-17 130.7 30.0 307 99-437 89-441 (442)
317 PRK12389 glutamate-1-semialdeh 99.6 1.7E-12 3.7E-17 129.0 31.1 347 40-436 45-427 (428)
318 PRK09221 beta alanine--pyruvat 99.6 1.6E-12 3.4E-17 129.4 30.8 307 99-437 92-444 (445)
319 TIGR02617 tnaA_trp_ase tryptop 99.6 2.2E-12 4.7E-17 123.8 30.1 348 49-436 42-441 (467)
320 PRK08742 adenosylmethionine--8 99.6 1.4E-12 3.1E-17 130.3 30.3 311 99-437 107-468 (472)
321 PRK06173 adenosylmethionine--8 99.6 1.3E-12 2.7E-17 129.4 29.4 347 40-437 36-426 (429)
322 PRK05367 glycine dehydrogenase 99.6 1.9E-12 4.2E-17 138.0 32.1 346 48-439 499-878 (954)
323 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 1.3E-14 2.7E-19 140.0 14.2 182 93-295 63-256 (417)
324 PRK06062 hypothetical protein; 99.6 1.1E-12 2.4E-17 130.7 28.4 356 40-439 45-448 (451)
325 PRK07986 adenosylmethionine--8 99.6 1.8E-12 3.9E-17 128.2 29.5 341 44-436 39-423 (428)
326 TIGR03799 NOD_PanD_pyr putativ 99.6 1.8E-12 4E-17 130.4 29.8 318 91-429 121-518 (522)
327 PRK06105 aminotransferase; Pro 99.6 2E-12 4.2E-17 129.4 29.7 355 43-439 43-452 (460)
328 PRK07481 hypothetical protein; 99.6 4E-12 8.6E-17 126.9 31.1 312 98-437 85-446 (449)
329 PRK07036 hypothetical protein; 99.6 3E-12 6.6E-17 128.1 30.3 356 41-438 44-454 (466)
330 PRK06149 hypothetical protein; 99.6 6.5E-12 1.4E-16 136.4 34.8 353 44-436 581-970 (972)
331 PRK15029 arginine decarboxylas 99.6 5.5E-13 1.2E-17 137.8 25.2 181 94-292 203-399 (755)
332 TIGR00508 bioA adenosylmethion 99.6 1.7E-12 3.7E-17 128.7 27.1 280 121-436 106-426 (427)
333 COG2873 MET17 O-acetylhomoseri 99.6 1.1E-12 2.5E-17 120.5 23.6 155 97-292 64-222 (426)
334 PRK05630 adenosylmethionine--8 99.6 2.6E-12 5.6E-17 127.0 27.9 342 40-436 32-420 (422)
335 PRK07483 hypothetical protein; 99.6 4E-12 8.6E-17 126.5 29.2 360 41-438 23-439 (443)
336 COG0076 GadB Glutamate decarbo 99.6 2.5E-12 5.5E-17 127.1 27.4 253 96-372 98-381 (460)
337 PRK07030 adenosylmethionine--8 99.6 9.4E-12 2E-16 124.5 31.5 307 99-437 90-447 (466)
338 PRK06148 hypothetical protein; 99.6 9E-12 2E-16 135.4 33.7 355 44-437 620-1011(1013)
339 PRK06916 adenosylmethionine--8 99.6 7.7E-12 1.7E-16 125.1 30.8 353 43-439 51-458 (460)
340 PRK06938 diaminobutyrate--2-ox 99.6 2.1E-11 4.4E-16 122.0 33.8 314 99-437 106-461 (464)
341 PRK12566 glycine dehydrogenase 99.6 3.8E-12 8.2E-17 132.8 29.1 318 85-438 526-878 (954)
342 TIGR00461 gcvP glycine dehydro 99.6 4.1E-12 8.9E-17 133.4 29.2 311 95-439 526-870 (939)
343 PRK07480 putative aminotransfe 99.6 4.2E-12 9.1E-17 126.7 28.0 356 42-439 44-451 (456)
344 PF01212 Beta_elim_lyase: Beta 99.5 9.3E-14 2E-18 129.6 14.6 186 90-298 24-212 (290)
345 TIGR00474 selA seryl-tRNA(sec) 99.5 1.2E-11 2.5E-16 122.5 29.0 292 97-430 124-453 (454)
346 TIGR01366 serC_3 phosphoserine 99.5 3.8E-12 8.2E-17 123.7 25.0 283 97-436 43-360 (361)
347 PRK06931 diaminobutyrate--2-ox 99.5 2.4E-11 5.2E-16 121.4 31.2 316 98-438 100-456 (459)
348 KOG2862 Alanine-glyoxylate ami 99.5 7E-11 1.5E-15 106.1 30.4 281 123-438 71-384 (385)
349 PRK13578 ornithine decarboxyla 99.5 4.3E-12 9.3E-17 130.0 25.3 160 120-293 190-369 (720)
350 KOG1357 Serine palmitoyltransf 99.5 5.2E-13 1.1E-17 125.3 15.6 298 97-434 184-500 (519)
351 PRK15400 lysine decarboxylase 99.5 1.2E-11 2.5E-16 126.7 25.1 167 98-287 198-374 (714)
352 PRK06209 glutamate-1-semialdeh 99.5 3.7E-11 8.1E-16 119.4 26.4 335 40-438 40-407 (431)
353 PRK15399 lysine decarboxylase 99.5 6.4E-11 1.4E-15 121.3 27.8 158 120-292 211-380 (713)
354 TIGR01365 serC_2 phosphoserine 99.4 2.6E-10 5.7E-15 110.2 26.8 295 97-433 37-370 (374)
355 KOG1358 Serine palmitoyltransf 99.4 4.2E-12 9.2E-17 117.2 13.4 320 80-436 124-465 (467)
356 PRK08297 L-lysine aminotransfe 99.4 8E-10 1.7E-14 110.1 30.7 281 120-437 110-442 (443)
357 PF00282 Pyridoxal_deC: Pyrido 99.4 1.6E-10 3.4E-15 112.4 23.4 258 91-363 71-366 (373)
358 PLN02452 phosphoserine transam 99.4 3.1E-09 6.7E-14 102.8 31.2 330 50-436 8-363 (365)
359 TIGR00699 GABAtrns_euk 4-amino 99.4 3.6E-10 7.9E-15 112.3 25.3 279 121-434 123-464 (464)
360 PRK05367 glycine dehydrogenase 99.3 8.1E-10 1.8E-14 118.2 28.8 286 88-431 105-437 (954)
361 PLN02414 glycine dehydrogenase 99.3 5E-10 1.1E-14 119.3 26.2 275 98-432 151-465 (993)
362 COG0161 BioA Adenosylmethionin 99.3 1.8E-09 3.9E-14 104.4 26.8 292 120-439 105-446 (449)
363 TIGR03251 LAT_fam L-lysine 6-t 99.3 1.8E-09 3.8E-14 107.5 27.1 280 120-432 103-430 (431)
364 COG3033 TnaA Tryptophanase [Am 99.3 2.3E-09 5E-14 98.3 25.2 324 89-436 73-444 (471)
365 KOG1404 Alanine-glyoxylate ami 99.3 3.9E-09 8.5E-14 98.0 26.5 345 42-430 44-432 (442)
366 COG1982 LdcC Arginine/lysine/o 99.3 4.7E-09 1E-13 103.7 28.7 170 97-293 72-246 (557)
367 PLN02974 adenosylmethionine-8- 99.3 5.6E-09 1.2E-13 110.0 30.4 230 185-434 567-816 (817)
368 KOG1402 Ornithine aminotransfe 99.3 2.1E-09 4.5E-14 97.5 23.1 293 98-435 100-426 (427)
369 TIGR03811 tyr_de_CO2_Ent tyros 99.3 3.9E-08 8.4E-13 100.3 34.4 330 91-438 115-604 (608)
370 PF06838 Met_gamma_lyase: Meth 99.2 9.3E-09 2E-13 95.4 23.1 190 86-307 44-252 (403)
371 PRK12462 phosphoserine aminotr 99.2 3.7E-08 8E-13 94.4 27.6 328 50-436 5-362 (364)
372 COG1003 GcvP Glycine cleavage 99.2 3.4E-08 7.4E-13 93.1 25.1 318 87-439 94-450 (496)
373 KOG1401 Acetylornithine aminot 99.1 1.1E-08 2.3E-13 95.8 20.8 291 119-438 115-432 (433)
374 PF00202 Aminotran_3: Aminotra 99.1 3.1E-09 6.7E-14 102.4 17.1 250 44-323 12-291 (339)
375 COG3844 Kynureninase [Amino ac 99.0 1.1E-07 2.3E-12 86.5 20.9 272 118-438 91-404 (407)
376 KOG1403 Predicted alanine-glyo 99.0 1.3E-07 2.7E-12 85.0 21.0 299 121-439 103-440 (452)
377 KOG1383 Glutamate decarboxylas 98.9 2.1E-07 4.6E-12 88.6 20.7 305 95-439 116-449 (491)
378 TIGR00461 gcvP glycine dehydro 98.9 2.1E-06 4.5E-11 91.1 29.2 285 88-431 93-426 (939)
379 COG1921 SelA Selenocysteine sy 98.9 1.1E-06 2.5E-11 83.3 23.8 178 119-323 82-267 (395)
380 KOG2467 Glycine/serine hydroxy 98.8 3.1E-06 6.8E-11 78.2 23.5 282 118-435 101-425 (477)
381 PF05889 SLA_LP_auto_ag: Solub 98.8 4.2E-06 9E-11 79.5 24.7 299 120-435 74-389 (389)
382 KOG0629 Glutamate decarboxylas 98.8 1.9E-06 4.1E-11 81.2 21.2 320 95-434 137-507 (510)
383 COG4100 Cystathionine beta-lya 98.7 2.5E-06 5.4E-11 76.9 18.5 185 85-300 54-255 (416)
384 PF02347 GDC-P: Glycine cleava 98.6 2.9E-05 6.2E-10 75.7 23.6 282 95-430 106-429 (429)
385 KOG0628 Aromatic-L-amino-acid/ 98.5 0.00012 2.7E-09 70.0 24.7 312 93-437 107-472 (511)
386 COG0403 GcvP Glycine cleavage 98.4 0.00047 1E-08 65.7 27.1 270 118-433 135-447 (450)
387 PF03841 SelA: L-seryl-tRNA se 98.3 4.8E-07 1E-11 85.1 3.9 213 119-353 61-296 (367)
388 KOG2040 Glycine dehydrogenase 98.2 0.00031 6.7E-09 69.9 21.6 312 87-436 567-918 (1001)
389 KOG1405 4-aminobutyrate aminot 98.2 7.2E-05 1.6E-09 69.1 15.5 217 184-436 255-483 (484)
390 PRK12566 glycine dehydrogenase 98.1 0.0018 4E-08 68.9 24.6 262 118-431 139-439 (954)
391 COG1932 SerC Phosphoserine ami 97.9 0.0082 1.8E-07 56.5 23.2 332 49-437 5-364 (365)
392 KOG3843 Predicted serine hydro 97.5 0.0055 1.2E-07 54.7 14.9 292 129-440 85-406 (432)
393 PLN02672 methionine S-methyltr 97.4 0.0084 1.8E-07 65.4 18.0 191 88-303 419-625 (1082)
394 KOG3846 L-kynurenine hydrolase 97.3 0.046 9.9E-07 50.2 17.9 118 118-243 126-254 (465)
395 KOG2040 Glycine dehydrogenase 95.5 1.5 3.3E-05 44.7 18.0 87 330-431 391-478 (1001)
396 KOG2790 Phosphoserine aminotra 94.7 3.5 7.6E-05 37.8 18.7 335 47-437 5-369 (370)
397 KOG1201 Hydroxysteroid 17-beta 87.7 15 0.00032 34.3 12.6 142 118-284 36-182 (300)
398 COG2102 Predicted ATPases of P 85.4 9.3 0.0002 33.9 9.6 98 123-236 4-115 (223)
399 PF05368 NmrA: NmrA-like famil 81.1 10 0.00022 34.1 8.7 97 123-238 1-99 (233)
400 PRK08265 short chain dehydroge 73.9 53 0.0011 30.0 11.5 100 120-226 6-107 (261)
401 COG1105 FruK Fructose-1-phosph 71.0 91 0.002 29.5 12.0 62 179-243 108-169 (310)
402 COG0505 CarA Carbamoylphosphat 70.2 12 0.00026 35.7 6.0 57 143-215 178-236 (368)
403 PF00106 adh_short: short chai 69.9 40 0.00087 28.0 9.0 134 123-284 3-144 (167)
404 KOG1465 Translation initiation 68.1 1.1E+02 0.0023 28.7 11.7 107 118-240 160-271 (353)
405 COG1648 CysG Siroheme synthase 67.1 23 0.0005 31.5 7.0 95 118-241 10-106 (210)
406 PRK12936 3-ketoacyl-(acyl-carr 66.0 90 0.002 27.8 11.1 83 121-209 7-89 (245)
407 TIGR01470 cysG_Nterm siroheme 66.0 36 0.00077 30.1 8.0 96 118-241 7-103 (205)
408 COG1088 RfbB dTDP-D-glucose 4, 65.6 64 0.0014 30.3 9.5 111 122-249 2-137 (340)
409 PF03652 UPF0081: Uncharacteri 65.5 28 0.0006 28.5 6.7 59 181-244 37-99 (135)
410 PRK04296 thymidine kinase; Pro 64.0 98 0.0021 26.9 11.6 123 129-275 16-141 (190)
411 PRK06500 short chain dehydroge 63.8 86 0.0019 28.1 10.5 81 121-207 7-87 (249)
412 TIGR00290 MJ0570_dom MJ0570-re 63.7 69 0.0015 28.8 9.3 98 123-236 4-114 (223)
413 PRK12481 2-deoxy-D-gluconate 3 63.1 95 0.0021 28.1 10.7 82 121-209 9-91 (251)
414 cd02742 GH20_hexosaminidase Be 62.5 16 0.00036 34.5 5.6 63 165-238 28-90 (303)
415 PRK06483 dihydromonapterin red 62.4 1.1E+02 0.0025 27.1 11.1 77 122-206 4-80 (236)
416 PF13460 NAD_binding_10: NADH( 60.5 46 0.001 28.3 7.7 87 123-232 1-88 (183)
417 PRK05872 short chain dehydroge 59.5 1.2E+02 0.0025 28.4 10.8 84 119-209 8-93 (296)
418 KOG1467 Translation initiation 59.0 1.1E+02 0.0024 30.6 10.4 132 95-243 325-472 (556)
419 cd06568 GH20_SpHex_like A subg 58.6 15 0.00033 35.1 4.7 64 165-238 30-93 (329)
420 PRK07231 fabG 3-ketoacyl-(acyl 58.6 1.3E+02 0.0028 26.9 10.7 85 120-209 5-90 (251)
421 KOG1199 Short-chain alcohol de 58.1 61 0.0013 27.7 7.4 78 123-207 12-90 (260)
422 TIGR00289 conserved hypothetic 57.1 1.5E+02 0.0032 26.7 10.3 98 123-236 4-114 (222)
423 COG2984 ABC-type uncharacteriz 56.9 1.8E+02 0.0039 27.6 11.7 128 90-242 66-197 (322)
424 COG0816 Predicted endonuclease 56.5 47 0.001 27.4 6.4 57 182-243 40-99 (141)
425 PRK07063 short chain dehydroge 56.1 1.6E+02 0.0034 26.7 11.3 83 120-207 7-93 (260)
426 PRK07067 sorbitol dehydrogenas 56.1 1.5E+02 0.0033 26.6 10.9 81 121-207 7-87 (257)
427 PRK08862 short chain dehydroge 55.8 1.1E+02 0.0025 27.2 9.7 82 121-209 6-91 (227)
428 PRK06182 short chain dehydroge 55.4 1.5E+02 0.0032 27.2 10.7 77 122-207 5-81 (273)
429 cd06562 GH20_HexA_HexB-like Be 55.2 19 0.00042 34.8 4.7 59 165-238 30-88 (348)
430 PF02662 FlpD: Methyl-viologen 54.5 29 0.00064 27.9 4.9 60 165-234 27-91 (124)
431 PRK05678 succinyl-CoA syntheta 54.4 51 0.0011 31.0 7.2 38 200-243 89-126 (291)
432 PRK05867 short chain dehydroge 54.0 1.7E+02 0.0036 26.4 11.0 83 120-207 9-93 (253)
433 PRK06194 hypothetical protein; 53.9 1.8E+02 0.0039 26.7 11.4 82 121-207 7-90 (287)
434 TIGR03573 WbuX N-acetyl sugar 53.4 2.2E+02 0.0047 27.5 12.6 109 120-249 60-176 (343)
435 PRK08277 D-mannonate oxidoredu 52.4 1.9E+02 0.0041 26.5 11.0 83 120-207 10-94 (278)
436 PRK05717 oxidoreductase; Valid 52.3 1.6E+02 0.0035 26.5 10.3 81 121-207 11-91 (255)
437 PRK08589 short chain dehydroge 52.1 1.9E+02 0.0041 26.4 11.3 82 121-209 7-90 (272)
438 PRK08335 translation initiatio 51.7 2.1E+02 0.0044 26.7 11.4 116 99-238 94-216 (275)
439 TIGR02415 23BDH acetoin reduct 51.7 1.7E+02 0.0038 26.1 10.4 86 123-214 3-91 (254)
440 PF02571 CbiJ: Precorrin-6x re 51.2 43 0.00094 30.7 6.1 94 122-237 2-97 (249)
441 cd06570 GH20_chitobiase-like_1 50.3 23 0.00049 33.7 4.2 56 165-237 30-85 (311)
442 PRK08535 translation initiatio 49.8 2.3E+02 0.0051 26.8 11.9 103 118-238 118-227 (310)
443 PRK06139 short chain dehydroge 49.4 1.8E+02 0.004 27.7 10.5 82 120-207 7-91 (330)
444 smart00642 Aamy Alpha-amylase 49.3 78 0.0017 26.9 7.0 27 218-244 68-94 (166)
445 PRK05876 short chain dehydroge 49.3 2.1E+02 0.0047 26.2 11.0 83 121-209 7-91 (275)
446 PF01902 ATP_bind_4: ATP-bindi 48.9 80 0.0017 28.3 7.3 99 123-237 4-115 (218)
447 TIGR01019 sucCoAalpha succinyl 48.7 67 0.0015 30.1 7.0 76 150-243 48-124 (286)
448 COG1184 GCD2 Translation initi 48.6 2.4E+02 0.0052 26.6 11.7 108 118-243 117-232 (301)
449 PRK06372 translation initiatio 48.5 2.2E+02 0.0048 26.1 11.5 100 120-238 86-190 (253)
450 PRK06463 fabG 3-ketoacyl-(acyl 48.3 2.1E+02 0.0045 25.8 11.3 79 121-207 8-86 (255)
451 PF08543 Phos_pyr_kin: Phospho 47.9 61 0.0013 29.5 6.6 55 182-244 43-97 (246)
452 TIGR03679 arCOG00187 arCOG0018 47.9 2E+02 0.0044 25.6 9.9 100 124-236 2-115 (218)
453 PRK00109 Holliday junction res 47.9 81 0.0017 25.9 6.7 57 182-243 41-100 (138)
454 PF10087 DUF2325: Uncharacteri 47.6 1.1E+02 0.0024 23.1 7.0 69 155-239 13-81 (97)
455 PRK07109 short chain dehydroge 47.2 2.2E+02 0.0048 27.1 10.7 81 120-206 8-91 (334)
456 PRK06935 2-deoxy-D-gluconate 3 47.1 2.2E+02 0.0047 25.7 10.8 82 119-207 14-98 (258)
457 TIGR00511 ribulose_e2b2 ribose 46.9 2.6E+02 0.0056 26.5 11.9 103 118-238 113-222 (301)
458 COG4221 Short-chain alcohol de 46.8 1.8E+02 0.0039 26.5 9.0 99 122-227 7-110 (246)
459 PRK07523 gluconate 5-dehydroge 46.5 2.2E+02 0.0048 25.6 11.3 82 120-207 10-94 (255)
460 PRK05562 precorrin-2 dehydroge 46.4 2.2E+02 0.0048 25.6 10.2 94 120-241 25-119 (223)
461 PRK08063 enoyl-(acyl carrier p 46.4 2.2E+02 0.0047 25.4 10.1 81 122-208 6-90 (250)
462 cd06569 GH20_Sm-chitobiase-lik 46.2 40 0.00087 33.8 5.5 76 165-241 34-117 (445)
463 KOG2741 Dimeric dihydrodiol de 46.1 44 0.00094 31.9 5.3 73 153-243 60-132 (351)
464 COG1087 GalE UDP-glucose 4-epi 45.9 1.1E+02 0.0025 28.8 7.8 94 122-235 2-111 (329)
465 PRK06841 short chain dehydroge 45.6 2.3E+02 0.0049 25.4 11.0 83 120-208 15-97 (255)
466 TIGR01832 kduD 2-deoxy-D-gluco 45.5 2.2E+02 0.0048 25.3 11.4 83 119-207 4-87 (248)
467 PRK08263 short chain dehydroge 45.2 2.3E+02 0.0049 25.9 10.2 80 122-207 5-84 (275)
468 PRK07478 short chain dehydroge 44.9 2.3E+02 0.005 25.4 10.5 81 121-207 7-90 (254)
469 PF00728 Glyco_hydro_20: Glyco 44.3 18 0.00038 34.9 2.6 62 165-238 30-91 (351)
470 PRK06196 oxidoreductase; Provi 43.6 2.3E+02 0.0049 26.7 10.1 82 119-207 25-106 (315)
471 PRK07825 short chain dehydroge 43.5 2.6E+02 0.0055 25.5 10.4 81 121-209 6-86 (273)
472 cd06563 GH20_chitobiase-like T 43.5 35 0.00077 33.1 4.6 70 165-238 30-104 (357)
473 PRK12935 acetoacetyl-CoA reduc 43.0 2.4E+02 0.0053 25.1 10.2 82 121-208 7-92 (247)
474 TIGR00250 RNAse_H_YqgF RNAse H 42.7 1.3E+02 0.0028 24.4 7.0 57 182-243 35-94 (130)
475 PRK08057 cobalt-precorrin-6x r 42.6 79 0.0017 28.9 6.4 93 121-238 3-97 (248)
476 KOG2977 Glycosyltransferase [G 42.6 2.9E+02 0.0063 25.8 10.6 104 89-193 74-184 (323)
477 PRK05693 short chain dehydroge 42.5 2.7E+02 0.0058 25.4 10.6 76 123-207 4-79 (274)
478 PRK06484 short chain dehydroge 42.3 2.2E+02 0.0047 29.1 10.4 79 122-206 7-85 (520)
479 PRK07097 gluconate 5-dehydroge 42.3 2.6E+02 0.0057 25.3 11.2 83 120-208 10-95 (265)
480 PRK06079 enoyl-(acyl carrier p 42.3 1.5E+02 0.0032 26.8 8.4 83 120-209 7-91 (252)
481 cd01994 Alpha_ANH_like_IV This 42.2 2.4E+02 0.0051 24.7 10.2 101 123-236 3-117 (194)
482 TIGR00196 yjeF_cterm yjeF C-te 42.2 2.4E+02 0.0052 26.0 9.8 99 120-240 24-126 (272)
483 PRK12859 3-ketoacyl-(acyl-carr 42.1 2E+02 0.0043 26.0 9.2 102 119-227 5-125 (256)
484 PRK06482 short chain dehydroge 42.1 2.6E+02 0.0056 25.5 10.1 80 122-207 4-83 (276)
485 COG0296 GlgB 1,4-alpha-glucan 41.9 35 0.00076 35.6 4.3 34 213-246 207-240 (628)
486 PRK07890 short chain dehydroge 41.8 2.1E+02 0.0045 25.7 9.4 82 121-207 6-89 (258)
487 KOG1371 UDP-glucose 4-epimeras 41.8 1.3E+02 0.0028 28.6 7.6 70 120-194 2-76 (343)
488 TIGR03590 PseG pseudaminic aci 41.6 2.5E+02 0.0054 26.1 9.8 89 136-241 23-112 (279)
489 PRK08220 2,3-dihydroxybenzoate 41.5 2.6E+02 0.0056 24.9 11.2 76 120-207 8-83 (252)
490 PF02310 B12-binding: B12 bind 40.5 1.7E+02 0.0038 22.7 8.3 66 161-243 24-91 (121)
491 PRK06179 short chain dehydroge 40.2 2.9E+02 0.0062 25.1 10.6 95 122-227 6-102 (270)
492 PRK06200 2,3-dihydroxy-2,3-dih 40.2 1.4E+02 0.0031 27.0 7.9 81 120-206 6-86 (263)
493 TIGR03325 BphB_TodD cis-2,3-di 40.1 1.5E+02 0.0033 26.8 8.1 81 120-206 5-85 (262)
494 PRK10538 malonic semialdehyde 40.0 2.8E+02 0.006 24.8 10.2 79 123-207 3-81 (248)
495 PRK02308 uvsE putative UV dama 39.8 3E+02 0.0064 26.1 10.0 65 333-397 37-107 (303)
496 PRK07791 short chain dehydroge 39.8 3.1E+02 0.0067 25.3 11.5 83 121-209 7-100 (286)
497 PRK12743 oxidoreductase; Provi 39.2 2.8E+02 0.006 25.0 9.7 80 122-207 4-87 (256)
498 COG0373 HemA Glutamyl-tRNA red 39.1 1.7E+02 0.0036 29.1 8.3 92 125-241 182-274 (414)
499 PRK05650 short chain dehydroge 39.0 3E+02 0.0065 25.0 10.0 79 123-207 3-84 (270)
500 cd06564 GH20_DspB_LnbB-like Gl 38.7 63 0.0014 30.9 5.4 26 212-237 74-99 (326)
No 1
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-73 Score=519.63 Aligned_cols=427 Identities=63% Similarity=1.080 Sum_probs=405.3
Q ss_pred ccccchhhhhcccCCCCcchhhhhhhhcCCCCCCCCCCceeeeecccccccHHHHHHHHHhCCCCcccC-CCCCCCCccc
Q 046900 11 SVGLSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLEQQPEASTWG-KGAPGFRENA 89 (442)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 89 (442)
-+.+|+++....||.+++++.+|++|..++|++.+||.|+|+|+.+||.++.+.+++++.+.+.+..+. +|...++++.
T Consensus 36 ~~~lS~~~~~~~~~e~S~yf~g~~~y~~npy~~~~Np~GiIQmGlaENqlc~DL~~~wl~k~~~~~~~~~eg~~~f~~la 115 (471)
T KOG0256|consen 36 NNLLSSKAVDDKHGEDSSYFYGWKAYEKNPYDPIKNPLGIIQMGLAENQLCFDLIESWLSKNPEASNCTREGQSSFDELA 115 (471)
T ss_pred hhhcccccccccccccchHHHHHHhcccCCCCCCCCchHHHHhhhhhhHHHHHHHHHHHHhChhhhhcccccccchhhHh
Confidence 357899999999999999999999999999999999999999999999999999999999988877665 7777788899
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEE
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKI 169 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v 169 (442)
.|++++|++.+|+++|+|+.+.++.....+|+++++++|++.++..++.+|++|||..++|+|.|+++...++.+.|+++
T Consensus 116 ~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgvei 195 (471)
T KOG0256|consen 116 MFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEI 195 (471)
T ss_pred hcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceE
Confidence 99999999999999999999999988899999999999999999999999999999999999999999998887899999
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
++|.+..+++|+++++.||+++.++++.+.++|.|+++||+||.|.+++++++..++++|.++|+++|+||+|+..+|+.
T Consensus 196 vpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~ 275 (471)
T KOG0256|consen 196 VPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDK 275 (471)
T ss_pred EEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHH
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
..+.|+.++..+.. ...++|.+++|+||.||+||+|+|.|...++.+..+..++..++.+|++.|..++++|.+..+.+
T Consensus 276 ~~F~Sv~ev~~~~~-~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~ 354 (471)
T KOG0256|consen 276 SEFRSVLEVRKDPH-LDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTR 354 (471)
T ss_pred cCceEHHHHhhccc-cCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHH
Confidence 99999999887621 15689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPG 409 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~ 409 (442)
.++++++++++.+.+++.+.|+++||.+.+..+|+|+|+++...+...+++.+.+++++++++.++.+.||+.|.+..+|
T Consensus 355 ~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpG 434 (471)
T KOG0256|consen 355 EYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPG 434 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCC
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred EEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 410 WFRVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 410 ~iRls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
|+|++|+++.++.++-+++||+.++.+..
T Consensus 435 WFRvcFAn~~~~t~~~am~Ri~~~~~~~~ 463 (471)
T KOG0256|consen 435 WFRVCFANMSEETLEVAMRRLKQFLDSQV 463 (471)
T ss_pred eEEEEeccCCHHHHHHHHHHHHHHHHhhh
Confidence 99999999778877779999999987543
No 2
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.7e-71 Score=547.68 Aligned_cols=437 Identities=87% Similarity=1.373 Sum_probs=384.5
Q ss_pred CcccccccccccccchhhhhcccCCCCcchhhhhhhhcCCCCCCCCCCceeeeecccccccHHHHHHHHHhCCCCcccC-
Q 046900 1 MAIEIEQPSVSVGLSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLEQQPEASTWG- 79 (442)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~- 79 (442)
|+||+|||..+ +|+|+....++.+++++.+|+.+..++|++..||.|+|+|+++||.++.+.+.++++..+....+.
T Consensus 2 ~~~~~~~~~~~--ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~ 79 (447)
T PLN02607 2 MAIEIAQPAVG--LSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAENQVSFDLLEEYLKQHPEASSWGG 79 (447)
T ss_pred cchhhccchhh--hhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhhhhhHHHHHHHHHhCchhhcccc
Confidence 89999999865 599999999999999999999999999999999999999999999999999999999887654432
Q ss_pred CCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH
Q 046900 80 KGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR 159 (442)
Q Consensus 80 ~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~ 159 (442)
.+...+.....|.++.|.+.||+++|+|++++++...++++++|++|+|+++++.+++.++++|||.|++++|+|+.|..
T Consensus 80 ~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~ 159 (447)
T PLN02607 80 KGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDR 159 (447)
T ss_pred ccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH
Confidence 12223445667999999999999999999988775567899999999999999999999999999999999999999988
Q ss_pred hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEe
Q 046900 160 DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSD 239 (442)
Q Consensus 160 ~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~D 239 (442)
.+..+.|+++++++++++++|.+|++.+++++++..+.+.++|+++++|||||||.++|.+++++|+++|++|+++||+|
T Consensus 160 ~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~D 239 (447)
T PLN02607 160 DLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSD 239 (447)
T ss_pred HHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEe
Confidence 77644799999999987778999999999999987777889999999999999999999999999999999999999999
Q ss_pred ccCCcCCCCCCCcccHHHHHhhhcC-CCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHH
Q 046900 240 EIYSGSAFSSSEFVSIAEILEARQY-KDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLL 318 (442)
Q Consensus 240 e~y~~~~~~~~~~~s~~~~~~~~~~-~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~ 318 (442)
|+|++++|++.++.|+.++..+.+. +..++|++++||||.||++|+|+||+++.++.+...++....+..+|+++|.++
T Consensus 240 EiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~ 319 (447)
T PLN02607 240 EIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLL 319 (447)
T ss_pred ccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHH
Confidence 9999999987778888877543211 114789999999999999999999999977788777777766667899999999
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEe
Q 046900 319 ASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNIS 398 (442)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~ 398 (442)
+++|.+.++.+++++.++++++++++.+.+.|++.|+.+.++++|+|+|++++........+.+.++++++++++||.|.
T Consensus 320 ~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~ 399 (447)
T PLN02607 320 ASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNIS 399 (447)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEc
Confidence 99999988878899999999999999999999999999999999999999998654322233456888899887899999
Q ss_pred CCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 399 PGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 399 pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
||+.|+...++|+||+|+.++++.++++++||.+++++++.
T Consensus 400 pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~ 440 (447)
T PLN02607 400 PGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDRRKT 440 (447)
T ss_pred CccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999877789999999976899999999999999987553
No 3
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.4e-69 Score=542.69 Aligned_cols=429 Identities=53% Similarity=0.985 Sum_probs=376.4
Q ss_pred ccccchhhhhcccCCCCcchhhhhhhhcCCCCCCCCCCceeeeecccccccHHHHHHHHHhCCCCcccC-CCCCCCCccc
Q 046900 11 SVGLSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLEQQPEASTWG-KGAPGFRENA 89 (442)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 89 (442)
...+||++....||+++++|.+|++|..++|++..||.|+|+|+.+||+++.+.+.+++++.+....+. ++...+.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (496)
T PLN02376 9 GAILSKIATNDQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIA 88 (496)
T ss_pred hhhhhhhhcccccCCCCchHHHHHHHhCCCCCcccCCCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhh
Confidence 567999999999999999999999999999999999999999999999999999999999887665444 3555567778
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEE
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKI 169 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v 169 (442)
.|+++.|.++||++||+|+++.+|..+.+++++|++|+|+++++..++.+|++|||.|++++|+|+.|...+....|+++
T Consensus 89 ~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~v 168 (496)
T PLN02376 89 NFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEI 168 (496)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEE
Confidence 89999999999999999999988766678999999999999999999999999999999999999999987763379999
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
++++++.+++|++|++.+++++++..+.+.++|+|++||||||||.+++.+++++|+++|++|+++||+||+|+++.|++
T Consensus 169 v~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~ 248 (496)
T PLN02376 169 IPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAG 248 (496)
T ss_pred EEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCC
Confidence 99999876789999999998876544444578999999999999999999999999999999999999999999999988
Q ss_pred CCcccHHHHHhhhcC--CCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchh
Q 046900 250 SEFVSIAEILEARQY--KDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKF 327 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~--~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 327 (442)
..+.++.++..+... ...+++++++||||.||+||+|+||++++++.+.+.++....++.+++++|.++++++.++++
T Consensus 249 ~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~~~ 328 (496)
T PLN02376 249 GDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQF 328 (496)
T ss_pred CCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCChhH
Confidence 777888877542100 012467889999999999999999999987888887777777777899999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccc-cChhhHHHHHHHHHHcCcEEEeCCCCCCCC
Q 046900 328 TENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEE-QTREGELALWDSMLHEVKLNISPGSSCHCS 406 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~ 406 (442)
.+++++++++.++++++.+.+.|++.|+++.++++|+|+|++++..... ..++++.++++.++++.||.|.||+.|+..
T Consensus 329 ~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~ 408 (496)
T PLN02376 329 VDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCT 408 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCC
Confidence 7889999999999999999999999999999999999999999865432 333456789999998889999999999876
Q ss_pred CCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 407 EPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 407 ~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.++||||+|+.++++++++++++|++++.+.+.
T Consensus 409 ~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~~ 441 (496)
T PLN02376 409 EPGWFRICFANMDDDTLHVALGRIQDFVSKNKN 441 (496)
T ss_pred CCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhhh
Confidence 789999999976889999999999999976543
No 4
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=8e-66 Score=514.23 Aligned_cols=428 Identities=62% Similarity=1.091 Sum_probs=363.1
Q ss_pred cchhhhhcccCCCCcchhhhhhhhcCCCCCCCCCCceeeeecccccccHHHHHHHHHhCCCCcccC-CCCCCCCcccccC
Q 046900 14 LSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLEQQPEASTWG-KGAPGFRENALFQ 92 (442)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Y~ 92 (442)
+|.+.+...++.+.+++.+|..+..++|++..||.++|+|+++||+++.+.+.++++.......+. .+.........|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~p~g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~ 83 (468)
T PLN02450 4 LSRKATCNSHGQDSSYFLGWEEYEKNPYDEIKNPSGIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQ 83 (468)
T ss_pred cchhhcccccCCCCchHHHHHHHhcCCCCcccCCCeeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCC
Confidence 567777777778999999999999999999999999999999999999999999888764321110 0111123456799
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEE
Q 046900 93 DYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPI 172 (442)
Q Consensus 93 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v 172 (442)
++.|.++||++||+|++++++.+.++++++|++|+|+++++..++.+++++||.|++++|+|+.|...+....|++++++
T Consensus 84 ~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v 163 (468)
T PLN02450 84 DYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPI 163 (468)
T ss_pred CCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEE
Confidence 99999999999999999888766668999999999999999999999999999999999999999887763379999999
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+++++++|.+|++.+++++.+..+.+.++|++++||||||||.++|.+++++|+++|++|+++||+||+|+++.|++..+
T Consensus 164 ~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~ 243 (468)
T PLN02450 164 HCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGF 243 (468)
T ss_pred ecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCc
Confidence 99877789999999999988755556688999999999999999999999999999999999999999999998877666
Q ss_pred ccHHHHHhhh---cCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHH
Q 046900 253 VSIAEILEAR---QYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 253 ~s~~~~~~~~---~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
.++.+...+. +.+..++|++++||||.||+||+|+||++++++.+.+.+.+...++.++.++|.++..+|+++.+..
T Consensus 244 ~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~ 323 (468)
T PLN02450 244 VSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKFTK 323 (468)
T ss_pred ccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHH
Confidence 6766554210 0112579999999999999999999999997777777766665556679999999999999988766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPG 409 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~ 409 (442)
++++++++.++++++.+.+.|++.|+.+.++++|+|+|++++..........+.+++..+++++||.+.||+.|+...++
T Consensus 324 ~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g 403 (468)
T PLN02450 324 NYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPG 403 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCC
Confidence 68889999999999999999999999998999999999999865443334455778899988789999999999876689
Q ss_pred EEEEEeecCCHHHHHHHHHHHHHHHHHHHhhc
Q 046900 410 WFRVCFANMSEQTLEVALKRIHNFMQKRERRR 441 (442)
Q Consensus 410 ~iRls~~~~~~e~i~~~l~~l~~~l~~~~~~~ 441 (442)
||||+|+..+++++++++++|++++.+...||
T Consensus 404 ~~Rl~f~~~~~~~l~~~l~ri~~~l~~~~~~~ 435 (468)
T PLN02450 404 WFRVCFANMSEETLDLAMKRLKSFVESDSGRR 435 (468)
T ss_pred EEEEEecCCCHHHHHHHHHHHHHHHHhccccc
Confidence 99999996588999999999999998877443
No 5
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-61 Score=470.09 Aligned_cols=357 Identities=27% Similarity=0.495 Sum_probs=311.7
Q ss_pred CceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCc-EEE
Q 046900 48 SGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNR-IVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~-i~~ 125 (442)
.++|+|+++++.++. +.+.+.+...... ....|.+..|.++||++||+++.++++ +.+++++ |++
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~-----------~~~~Y~~~~G~~~LReaia~~~~~~~~--~~~~~~~eiiv 94 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEE-----------GGTHYTPSAGIPELREAIAEKYKRRYG--LDVDPEEEIIV 94 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhc-----------ccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCeEEE
Confidence 689999999997753 4455554443321 011677899999999999999999987 5677876 999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCC-CCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS-NNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
|+|+++++..++.+++++||.|++++|+|+.|...+.. .|++++.++++.+ ++|.+|++.|++++++ ++|+|
T Consensus 95 t~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~-~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~------ktk~i 167 (393)
T COG0436 95 TAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKL-AGGKPVPVPLDEEENGFKPDLEDLEAAITP------KTKAI 167 (393)
T ss_pred eCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHh-cCCEEEEEeCCcCccCCcCCHHHHHhhcCc------cceEE
Confidence 99999999999999999999999999999999999995 9999999998765 4899999999999986 89999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++|||||||.+++++++++|+++|++|+++||.||+|.++.|++..+.|+.++... .+++|.+.||||.++++|
T Consensus 168 ~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~-----~~~~i~i~s~SK~~~mtG 242 (393)
T COG0436 168 ILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGA-----RDRTITINSFSKTYGMTG 242 (393)
T ss_pred EEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCC-----cceEEEEecccccccccc
Confidence 999999999999999999999999999999999999999999998767788877542 478999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec-C
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK-G 360 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~ 360 (442)
||+||++++++.+.+.+.+.... .+.+.+.|.++.++|+..+. ...++.+++.|++||+.+.+.|.+. |+.+.. |
T Consensus 243 wRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p 321 (393)
T COG0436 243 WRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS-DEVVEEMREEYRERRDLLVEALNEIGGLSVVKPP 321 (393)
T ss_pred cceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc-hHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCC
Confidence 99999999657777777644433 46788999999999998754 4567788899999999999999987 599988 8
Q ss_pred CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC-CCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 361 NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS-EPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 361 ~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~-~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+|+||+|++++... ++.+++.+|++++||.|.||+.|+.. +.+++|||++. +.+++++++++|.++++..
T Consensus 322 ~Ga~Y~~~~i~~~~------d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 322 EGAFYLFPKIPELL------DSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARFLAEY 392 (393)
T ss_pred CeeEEEEeecCCCC------CHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHHHHhc
Confidence 89999999999752 47899999999999999999999985 77999999998 7799999999999998764
No 6
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.1e-55 Score=434.66 Aligned_cols=355 Identities=21% Similarity=0.328 Sum_probs=290.8
Q ss_pred CCCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cE
Q 046900 46 NPSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RI 123 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i 123 (442)
.+.++|+|+.++++++ ++.+.+.+.+.... .....|++..|.++||++||+|+.+.+| +.++++ +|
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 95 (388)
T PRK07366 28 AGKELIDLSLGSSDLPAPAHALEAIAQSLHD----------PSTHGYLLFHGTLDFREAAAQWYEQRFG--LAVDPETEV 95 (388)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhC----------cccCCCCCCCCCHHHHHHHHHHHHHhhC--CcCCCcCeE
Confidence 3557899999998875 45555555543211 1235698889999999999999998776 557888 69
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
++|+|+++++.+++.+++++||.|++++|+|+.|...++. .|++++.+|++++++|.+|++++++.+.. ++|+
T Consensus 96 ~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 168 (388)
T PRK07366 96 LPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYL-AGGQIYPMPLRAENDFLPVFADIPTEVLA------QARL 168 (388)
T ss_pred EECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHh-cCCEEEEEECCCccCCCCCHHHHHHhhcc------cceE
Confidence 9999999999999999999999999999999999999985 99999999998777899999999877654 6789
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC-cccHHHHHhhhcCCCCCcEEEEecCcccCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE-FVSIAEILEARQYKDSERVHIVYSLSKDLGL 282 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~-~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 282 (442)
+++||||||||.++|.+++++|+++|++|+++||+||+|.++.|++.. +.++.+++.. .+++|+++||||.||+
T Consensus 169 i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-----~~~vi~~~SfSK~~g~ 243 (388)
T PRK07366 169 MVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPE-----KSVSIEFFTLSKSYNM 243 (388)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCC-----cccEEEEeecccccCC
Confidence 999999999999999999999999999999999999999999987643 4566665442 3678999999999999
Q ss_pred CCceeEEEeecCHHHHHHHHHccccCCC---cHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 046900 283 PGFRVGTIYSYNDKVVTTARRMSSFTLI---SSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK 359 (442)
Q Consensus 283 ~G~RiG~i~~~~~~~~~~~~~~~~~~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 359 (442)
||+|+||+++ ++.+.+.+.+....+.. +.+.|.+++++..+ ++++++.++.++++|+.+.+.|++.|+.+..
T Consensus 244 ~GlRiG~~v~-~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~ 318 (388)
T PRK07366 244 GGFRIGFAIG-NAQLIQALRQVKAVVDFNQYRGILNGAIAALTGP----QATVQQTVQIFRQRRDAFINALHQIGWPVPL 318 (388)
T ss_pred cchhheehcC-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 9999999998 56666666654443222 33345554444332 4578889999999999999999988888778
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
|++|+|+|++++..... ++.++++.+++++||.+.||+.|+...++|+||+++. +++++++++++|++++
T Consensus 319 p~~g~f~~~~~~~~~~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 319 PEATMYVWAKLPEPWQG----NSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAFL 388 (388)
T ss_pred CCeeEEEEEECCcccCC----CHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHhC
Confidence 99999999999864210 2567888887777999999999975556899999997 7899999999998763
No 7
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.8e-55 Score=429.47 Aligned_cols=350 Identities=20% Similarity=0.388 Sum_probs=296.1
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC-CcEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i~ 124 (442)
..++|+|+.++++++ ++.+.+.+.+.... .....|+ ..|.++||++||+|+++++| +.+++ ++|+
T Consensus 31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----------~~~~~y~-~~G~~~lr~aia~~~~~~~g--~~~~~~~~I~ 97 (399)
T PRK07681 31 GHKMIDLSIGNPDMPPADFVREEMVHTANQ----------KESYGYT-LSGIQEFHEAVTEYYNNTHN--VILNADKEVL 97 (399)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhc----------cccCCCC-CCCcHHHHHHHHHHHHHHhC--CCCCCCCeEE
Confidence 457899999988764 45566655543211 0123354 47999999999999998877 55788 7999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++.+++.+++++||.|++++|+|+.|...++. .|++++++|++++++|.+|++.+++.+.+ +++++
T Consensus 98 it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v 170 (399)
T PRK07681 98 LLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQM-AGATSYYMPLKKENDFLPDLELIPEEIAD------KAKMM 170 (399)
T ss_pred ECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHh-cCCEEEEEecCCCCCCcCCHHHHHHhccc------cceEE
Confidence 999999999999999999999999999999999999985 99999999998877899999999988754 78999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++|||||||.++|.+++++|+++|++++++||+||+|.++.|++..+.++.++... .+++|+++||||.||+||
T Consensus 171 ~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~-----~~~~i~~~S~SK~~~~~G 245 (399)
T PRK07681 171 ILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGA-----KEVGVEINSLSKSYSLAG 245 (399)
T ss_pred EEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCC-----cccEEEEeecccccCCcc
Confidence 999999999999999999999999999999999999999998876655666655432 468999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||+++ ++.+.+.+..... .+.++.+.|.++..++.++. +++++.++.++++++.+.+.|++.|+++..|.+
T Consensus 246 lRiG~~i~-~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~ 321 (399)
T PRK07681 246 SRIGYMIG-NEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGA---AFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAG 321 (399)
T ss_pred ceeEEEec-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCe
Confidence 99999998 5666666655443 35688899999999998753 467888899999999999999998988878899
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHN 432 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~ 432 (442)
|+|+|++++... ++.+++..+++++||.+.||+.|+...++|+||+++. +++++++++++|++
T Consensus 322 g~f~~~~l~~~~------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~l~~l~~ 384 (399)
T PRK07681 322 SMFVWAEIPKGW------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ-DEEVLQQAVENIRN 384 (399)
T ss_pred eeEEEEECCCCC------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 999999998643 2578899998867999999999976556899999997 78999999999998
No 8
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-54 Score=426.66 Aligned_cols=358 Identities=19% Similarity=0.314 Sum_probs=293.3
Q ss_pred CCceeeeeccccc-c-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC-CcE
Q 046900 47 PSGVIQMGLAENQ-V-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRI 123 (442)
Q Consensus 47 ~~~~i~l~~~~n~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i 123 (442)
+.++|+|+.+.+. . +++.+.+.+.+.... .....|++..|.++||++|++|+.+.+| +.+++ ++|
T Consensus 38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~----------~~~~~Y~~~~G~~~LR~aia~~l~~~~g--~~~~~~~~I 105 (405)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVER----------GGVQAYTEYRGDADIRELLAARLAAFTG--APVDAADEL 105 (405)
T ss_pred CCCceecCCcCCCCCCCCHHHHHHHHHHHhc----------CCCccCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCCE
Confidence 5678899987643 2 334444444332211 1235799999999999999999998877 45677 899
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC---CCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD---SSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~---~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
++|+|+++++.+++.+++++||.|++++|+|+.+...++. .|++++.++++ .+++|.+|++.|++.+++ +
T Consensus 106 ~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~-~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~------~ 178 (405)
T PRK06207 106 IITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEF-FEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA------G 178 (405)
T ss_pred EEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHH-cCCEEEEEeccccCcccCCCcCHHHHHHhhhh------c
Confidence 9999999999999999999999999999999999998884 99999999986 334688999999998875 6
Q ss_pred eeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccC
Q 046900 201 VRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDL 280 (442)
Q Consensus 201 ~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~ 280 (442)
+++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.|++..+.++..+.. ..+++++++||||+|
T Consensus 179 ~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~-----~~~~vi~i~SfSK~~ 253 (405)
T PRK06207 179 VRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPI-----DPENVITIMGPSKTE 253 (405)
T ss_pred CeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCC-----CcCcEEEEecchhhc
Confidence 789999999999999999999999999999999999999999999987755555554422 247999999999999
Q ss_pred CCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 046900 281 GLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIEC 357 (442)
Q Consensus 281 g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 357 (442)
++||+|+||+++ ++.+.+.+...... ...+.++|.++..++++.. .++++..+.++++|+.+.+.|++. ++++
T Consensus 254 ~lpGlRiG~ii~-~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 329 (405)
T PRK06207 254 SLSGYRLGVAFG-SPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPD---GWMKDRIARHQAIRDDLLRVLRGVEGVFV 329 (405)
T ss_pred cCcccceEEEEc-CHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 999999999998 46666666654433 3456789999999997642 234555667788899999999877 7888
Q ss_pred ecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 358 LKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 358 ~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
..|++|+|+|++++.... ++.++++.|++++||.+.||+.|+...++++||+++. +.+++++++++|+++++++
T Consensus 330 ~~p~gg~fl~~~l~~~~~-----~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 330 RAPQAGSYLFPRLPRLAV-----SLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred cCCCeeEEEEEeCcccCC-----CHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 889999999999985311 2567888888667999999999976567899999998 8899999999999999876
Q ss_pred H
Q 046900 438 E 438 (442)
Q Consensus 438 ~ 438 (442)
+
T Consensus 404 ~ 404 (405)
T PRK06207 404 R 404 (405)
T ss_pred h
Confidence 4
No 9
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=2.8e-54 Score=428.84 Aligned_cols=366 Identities=19% Similarity=0.283 Sum_probs=293.8
Q ss_pred CCceeeeecccc---cc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCc
Q 046900 47 PSGVIQMGLAEN---QV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNR 122 (442)
Q Consensus 47 ~~~~i~l~~~~n---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~ 122 (442)
..++++|+++++ .+ +++.+.+.+.+.... ....+|++..|.++||+++|+|+++++| +.+++++
T Consensus 31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~----------~~~~~Y~~~~G~~~LReaia~~~~~~~g--~~~~~~~ 98 (433)
T PRK06855 31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMD----------DKSYGYCPTKGVLETREFLAELNNKRGG--AQITPDD 98 (433)
T ss_pred cccccccccCCCcccCCCCCHHHHHHHHHHhhc----------CCCCCCCCCCCCHHHHHHHHHHHHhccC--CCCCHhH
Confidence 346788888876 23 345555555543211 1245799999999999999999998766 5678999
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
|++|+|+++++.+++. ++++||.|++++|+|+.|........|++++.++++++++|.+|+++|++.++. ..+++
T Consensus 99 I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~----~~~~~ 173 (433)
T PRK06855 99 IIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKY----NPSIA 173 (433)
T ss_pred EEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhc----CCCce
Confidence 9999999999999985 789999999999999998754332368999999998777899999999998863 12578
Q ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC
Q 046900 203 GVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL 282 (442)
Q Consensus 203 ~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 282 (442)
+++++|||||||.++|.+++++|+++|++||++||+||+|.++.|++..+.++.++.++ .++|+++||||.|++
T Consensus 174 ~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~------~~~I~~~S~SK~~~~ 247 (433)
T PRK06855 174 GILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGD------VPGIALKGISKELPW 247 (433)
T ss_pred EEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCc------CCeEEEecCccccCC
Confidence 99999999999999999999999999999999999999999999977666787777542 467999999999999
Q ss_pred CCceeEEEeecC----HHHHHHHH---Hcc-ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 046900 283 PGFRVGTIYSYN----DKVVTTAR---RMS-SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA- 353 (442)
Q Consensus 283 ~G~RiG~i~~~~----~~~~~~~~---~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 353 (442)
||+|+||+++++ +.+...++ ... ....++++.|.++..++.++.+ ++|++++++.|+++++.+.+.|++.
T Consensus 248 pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~L~~~~ 326 (433)
T PRK06855 248 PGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEY-KNYLKERNKRYEKRSNIAYEKLKDVP 326 (433)
T ss_pred CcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcH-HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999842 22233322 221 2234678999999999988765 7789999999999999999999886
Q ss_pred CCeeecCCceEEEEEecCCcccc----cC-----------------hhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEE
Q 046900 354 GIECLKGNAGLFCWMNLSPLLEE----QT-----------------REGELALWDSMLHEVKLNISPGSSCHCSEPGWFR 412 (442)
Q Consensus 354 g~~~~~~~~g~~~~~~~~~~~~~----~~-----------------~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iR 412 (442)
|+.+..|+||||+|+++++.... .. ..++.+++..+++++||.+.||+.|+.. ..++|
T Consensus 327 ~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~-~~~~R 405 (433)
T PRK06855 327 GLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTE-LNGFR 405 (433)
T ss_pred CeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCC-CCceE
Confidence 78888999999999999864200 00 0124577777778889999999999743 34599
Q ss_pred EEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 413 VCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 413 ls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
||++..+++++++++++|++++++.
T Consensus 406 ls~~~~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 406 VTLLERDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred EEECCCcHHHHHHHHHHHHHHHHHH
Confidence 9999668999999999999998764
No 10
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-54 Score=425.88 Aligned_cols=366 Identities=22% Similarity=0.382 Sum_probs=296.3
Q ss_pred CCCceeeeecccccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-c
Q 046900 46 NPSGVIQMGLAENQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-R 122 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~ 122 (442)
++.++++|+.+.+.. +...+....+.... .....|++..|.++||+++|+|+.+.++ +.++++ +
T Consensus 31 ~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lR~~ia~~l~~~~~--~~~~~~~~ 97 (403)
T PRK08636 31 AGEDIIDFSMGNPDGPTPQHIIDKLCESAQK-----------PKTHGYSVSKGIYKLRLAICNWYKRKYN--VDLDPETE 97 (403)
T ss_pred cCCCEEEcCCcCCCCCCCHHHHHHHHHHhcC-----------CccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCe
Confidence 456789999886553 33344444433221 1246799999999999999999988776 557887 7
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh-cCCce
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES-KDMRV 201 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~-~~~~~ 201 (442)
|++|+|+++++.+++.+|+++||.|++++|+|+.+...++. .|+++++++++.+++|.+|++.+.+.+++..+ ...++
T Consensus 98 I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 176 (403)
T PRK08636 98 VVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFIL-AGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKP 176 (403)
T ss_pred EEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHh-cCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCc
Confidence 99999999999999999999999999999999999999985 99999999987555788998866544443221 13478
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
++++++|||||||.++|.+++++|+++|++|+++||+||+|+++.|++..+.++.++... .+++++++||||.||
T Consensus 177 ~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~-----~~~~i~~~S~SK~~~ 251 (403)
T PRK08636 177 KYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGA-----KDVAVESYTLSKSYN 251 (403)
T ss_pred eEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCc-----cccEEEEEecccccC
Confidence 899999999999999999999999999999999999999999998876555666665321 357888999999999
Q ss_pred CCCceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 046900 282 LPGFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK 359 (442)
Q Consensus 282 ~~G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 359 (442)
+||+|+||+++ ++.+...+.+... .+.++++.|.++..++... .+++++.++.++++++.+.+.|++.|+.+..
T Consensus 252 ~~GlRiG~iv~-~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 327 (403)
T PRK08636 252 MAGWRVGFVVG-NKKLVGALKKIKSWLDYGMFTPIQVAATIALDGD---QSCVEEIRETYRKRRDVLIESFANAGWELQK 327 (403)
T ss_pred CccceeeeeeC-CHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 99999999998 5566666655443 2456778888887776532 4578889999999999999999998888888
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
|.+|+|+|++++...... ++.+++..+++++||.+.||..|+....+|+||+++. +++++++++++|+++++.++
T Consensus 328 p~~g~~~~~~l~~~~~~~---~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~~~rl~~~l~~~~ 402 (403)
T PRK08636 328 PRASMFVWAKIPEPARHL---GSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIE-NENRIRQAARNIKKFLKELE 402 (403)
T ss_pred CCcceEEEEECCCccCCC---CHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhhc
Confidence 999999999998642111 2567888888777999999999976667899999995 89999999999999998754
No 11
>PLN02187 rooty/superroot1
Probab=100.00 E-value=5.5e-54 Score=428.37 Aligned_cols=364 Identities=20% Similarity=0.342 Sum_probs=293.7
Q ss_pred CCceeeeecccccc-----cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 47 PSGVIQMGLAENQV-----SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 47 ~~~~i~l~~~~n~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
..++|+|+.+++.+ +.+.+.+.+.+.... .....|++..|.++||+++|+|+++.++ .+++++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~----------~~~~~Y~~~~G~~~lR~aiA~~~~~~~~--~~~~~~ 132 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS----------GKGNSYGPGAGILPARRAVADYMNRDLP--HKLTPE 132 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC----------CCCCCCCCCCChHHHHHHHHHHHHHhcC--CCCCcc
Confidence 46799999997652 123333333332211 1235798889999999999999998766 568899
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
+|++|+|++++|.+++.+|+++||.|++++|+|+.|...+.. .|++++.+++.++++|.+|++.|++.+.+ ++
T Consensus 133 ~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~-~g~~~~~~~l~~~~~~~~d~~~l~~~~~~------~~ 205 (462)
T PLN02187 133 DIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAY-SGLEVRKFDLLPEKEWEIDLEGIEAIADE------NT 205 (462)
T ss_pred cEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHH-cCCEEEEEeCccccCCccCHHHHHHhcCC------Cc
Confidence 999999999999999999999999999999999999988884 99999999997667899999999988754 67
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.|++..+.++..+.. ..++++++||||.|+
T Consensus 206 ~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~------~~~vi~l~SfSK~f~ 279 (462)
T PLN02187 206 VAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFAS------IVPVLTLAGISKGWV 279 (462)
T ss_pred EEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhcc------CCcEEEEecchhhcC
Confidence 89999999999999999999999999999999999999999999997766667766543 257999999999999
Q ss_pred CCCceeEEEeecCH-HH---HHHHHHccccC----CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 282 LPGFRVGTIYSYND-KV---VTTARRMSSFT----LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 282 ~~G~RiG~i~~~~~-~~---~~~~~~~~~~~----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+||||+||++++++ .+ .+.+......+ .++.+.|.++.+++++.. .+|+++.++.++++++++.+.|++.
T Consensus 280 ~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~--~~~l~~~~~~l~~~r~~l~~~L~~~ 357 (462)
T PLN02187 280 VPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD--KNFFAKKNKILKHNVDLVCDRLKDI 357 (462)
T ss_pred CccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999998543 22 23343333322 347899999999997532 4678999999999999999999987
Q ss_pred CC-e-eecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHH
Q 046900 354 GI-E-CLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIH 431 (442)
Q Consensus 354 g~-~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~ 431 (442)
+. . +..|++|+|+|++++.... ....++.+++..+++++||.+.||+.|+ .++||||+++. +++.+++++++|.
T Consensus 358 ~~~~~~~~P~gg~fl~~~l~~~~~-~~~~~~~~~~~~ll~~~gV~v~pG~~fg--~~~~iRis~~~-~~e~l~~al~rL~ 433 (462)
T PLN02187 358 PCVVCPKKPESCTYLLTKLELSLM-DNIKDDIDFCVKLAREENLVFLPGDALG--LKNWMRITIGV-EAHMLEDALERLK 433 (462)
T ss_pred CCCcCCCCCCEeEEEEeecChhhC-CCCCCHHHHHHHHHhhCCEEEECccccC--CCCeEEEEeCC-CHHHHHHHHHHHH
Confidence 43 3 2368899999998863211 0011255777777777799999999996 36899999998 7899999999999
Q ss_pred HHHHHHHhhc
Q 046900 432 NFMQKRERRR 441 (442)
Q Consensus 432 ~~l~~~~~~~ 441 (442)
++++++.++.
T Consensus 434 ~~l~~~~~~~ 443 (462)
T PLN02187 434 GFCTRHAKKT 443 (462)
T ss_pred HHHHHhhhcc
Confidence 9999887754
No 12
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=2.6e-53 Score=427.45 Aligned_cols=349 Identities=23% Similarity=0.379 Sum_probs=282.6
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc-CCCCeEEEcCCCCcChHHhHhhhcC
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA-DPGDALLVPTPYYPGFDRDLRWRTG 166 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~~G 166 (442)
...|++..|.++||++||+|+++.+| +.+++++|++|+|+++++.+++.+++ ++||.|++++|+|+.|...++. .|
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~-~g 184 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDG--VPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITL-LG 184 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcC--CCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHH-cC
Confidence 45799999999999999999998776 56789999999999999999999998 7999999999999999999995 99
Q ss_pred cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 167 ~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
++++.++++++++|.+|++.|++.+.+...++.++|+++++|||||||.++|.+++++|+++|++|+++||+||+|.++.
T Consensus 185 ~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~ 264 (481)
T PTZ00377 185 GKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENI 264 (481)
T ss_pred CEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhc
Confidence 99999999887889999999999997654444578999999999999999999999999999999999999999999999
Q ss_pred CCC-CCcccHHHHHhhhcCCC--CCcEEEEecCccc-CCCCCceeEEEee--cCHHHHHHHHHccc-cCCCcHHHHHHHH
Q 046900 247 FSS-SEFVSIAEILEARQYKD--SERVHIVYSLSKD-LGLPGFRVGTIYS--YNDKVVTTARRMSS-FTLISSQTQYLLA 319 (442)
Q Consensus 247 ~~~-~~~~s~~~~~~~~~~~~--~~~vi~~~S~SK~-~g~~G~RiG~i~~--~~~~~~~~~~~~~~-~~~~s~~~q~~~~ 319 (442)
|++ ..+.++.++..+..... ..++|+++||||. +++||||+||+++ .++.+.+.+.+... .+..++++|.++.
T Consensus 265 ~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~~~~Q~a~~ 344 (481)
T PTZ00377 265 YDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSNVVGQLMTG 344 (481)
T ss_pred cCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCChHHHHHHH
Confidence 853 45667665433210000 1369999999997 5999999999986 25666666655443 3467889999999
Q ss_pred HHhcCch----h---HHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCC--cccc----cChhhHHHH
Q 046900 320 SMLSNKK----F---TENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSP--LLEE----QTREGELAL 385 (442)
Q Consensus 320 ~~l~~~~----~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~--~~~~----~~~~~~~~l 385 (442)
.++++.. . ..+++++.++.|+++++.+.+.|++. |+.+..|+||||+|++++. .... ....++..+
T Consensus 345 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~ 424 (481)
T PTZ00377 345 LMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLY 424 (481)
T ss_pred HHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHH
Confidence 9996421 1 13344555567899999999999987 8999999999999987642 1100 001123456
Q ss_pred HHHHHHcCcEEEeCCCCCCCC-CCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 386 WDSMLHEVKLNISPGSSCHCS-EPGWFRVCFANMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 386 ~~~l~~~~gi~v~pg~~f~~~-~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
+..+++++||.+.||+.|+.. +.+++|||++. +++++++++++|+++++++.++
T Consensus 425 ~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~-~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 425 CLELLESTGIVVVPGSGFGQKPGTYHFRITILP-PEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred HHHHHHHcCEEEeCCcccCCCCCCCEEEEEECC-CHHHHHHHHHHHHHHHHHHHHh
Confidence 677888889999999999753 35699999995 8889999999999999876543
No 13
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=9.2e-54 Score=422.00 Aligned_cols=353 Identities=20% Similarity=0.319 Sum_probs=289.6
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCc-cCCC-cE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK-FDLN-RI 123 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~~-~i 123 (442)
..++|+|+.++++++ ++.+.+.+.+.. .....|+++.|.++||++||+|+++++| ++ ++++ +|
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~~~i 93 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAANL------------DGLASYPTTAGLPALREAIAAWLERRYG--LPALDPATQV 93 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHHh------------hhhcCCCCCCCCHHHHHHHHHHHHHHhC--CCcCCccceE
Confidence 467899999998875 455666555442 1246799999999999999999998877 55 6775 89
Q ss_pred EEecChHHHHHHHHHhhcCC---CCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 124 VVTAGATAANELLTFILADP---GDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
++|+|+++++.+++++++++ ||.|++++|+|+.|...++. .|++++.+|++++++|.+|++.+++.+.+ +
T Consensus 94 ~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~-~g~~~~~vp~~~~~~~~~d~~~l~~~~~~------~ 166 (396)
T PRK09147 94 LPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALL-AGAEPYFLNCDPANNFAPDFDAVPAEVWA------R 166 (396)
T ss_pred EECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHh-cCCEEEEeccCccccCccCHHHHHHHHhh------c
Confidence 99999999999999999999 89999999999999999885 99999999998777899999999987764 7
Q ss_pred eeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC-CcccHHHHHhhhcCCCCCcEEEEecCccc
Q 046900 201 VRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS-EFVSIAEILEARQYKDSERVHIVYSLSKD 279 (442)
Q Consensus 201 ~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~S~SK~ 279 (442)
+|++++||||||||.++|.+++++|+++|++|+++||+||+|.++.|++. ...+........+.+..+++|+++||||.
T Consensus 167 ~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 246 (396)
T PRK09147 167 TQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKR 246 (396)
T ss_pred cEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccc
Confidence 89999999999999999999999999999999999999999999988663 22222221111000124799999999999
Q ss_pred CCCCCceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCee
Q 046900 280 LGLPGFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIEC 357 (442)
Q Consensus 280 ~g~~G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 357 (442)
|++||+|+||++++ +.+.+.+.+... .+.++++.|.++.+.+.. .+++++.++.++++++.+.+.|++. +.+
T Consensus 247 ~~~~GlRiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~----~~~~~~~~~~~~~~~~~~~~~L~~~-~~~ 320 (396)
T PRK09147 247 SNVPGLRSGFVAGD-AALLKKFLLYRTYHGCAMPPAVQAASIAAWND----EAHVRENRALYREKFDAVTPILAPV-LDV 320 (396)
T ss_pred cCCccceeeeecCC-HHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 99999999999995 566665554443 256788899988777754 3467888999999999999999875 667
Q ss_pred ecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC------CCCCEEEEEeecCCHHHHHHHHHHHH
Q 046900 358 LKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC------SEPGWFRVCFANMSEQTLEVALKRIH 431 (442)
Q Consensus 358 ~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~------~~~~~iRls~~~~~~e~i~~~l~~l~ 431 (442)
..|++|+|+|++++. ++.+++..|++++||.+.||+.|+. ...+++||+++. +++++++++++|+
T Consensus 321 ~~p~~g~f~~~~~~~--------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~-~~~~l~~~l~rl~ 391 (396)
T PRK09147 321 QLPDAGFYLWAKVPG--------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA-PLAECVEAAERIV 391 (396)
T ss_pred CCCCeeEEEEEECCC--------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC-CHHHHHHHHHHHH
Confidence 779999999999982 2567888888777999999999863 225799999998 7889999999999
Q ss_pred HHHH
Q 046900 432 NFMQ 435 (442)
Q Consensus 432 ~~l~ 435 (442)
+++.
T Consensus 392 ~~~~ 395 (396)
T PRK09147 392 DFCR 395 (396)
T ss_pred HHhc
Confidence 8874
No 14
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=9.2e-54 Score=434.09 Aligned_cols=360 Identities=21% Similarity=0.363 Sum_probs=290.7
Q ss_pred CCceeeeecccc---cc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 47 PSGVIQMGLAEN---QV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 47 ~~~~i~l~~~~n---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
..++|+|+++++ .+ |...+....+... ...+|++..|..+||++||+|+.++.+ ..++++
T Consensus 145 g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~-------------~~~~Y~~~~G~~~lReaia~~~~~~~~--~~~~~~ 209 (517)
T PRK13355 145 GTHILKLNIGNPAPFGFRTPDEVVYDMAQQLT-------------DTEGYSDSKGLFSARKAIMQYAQLKGL--PNVDVD 209 (517)
T ss_pred CCCeEEecCcCCCcCCCCCCHHHHHHHHHHhh-------------cCCCCCCCcChHHHHHHHHHHHHhcCC--CCCChh
Confidence 457899999654 23 3334444333321 134699999999999999999976543 347899
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
+|++|+|+++++.+++.+|+++||.|++++|+|+.|...+.. .|++++.++++++++|.+|++++++++.+ ++
T Consensus 210 ~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~-~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~ 282 (517)
T PRK13355 210 DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNL-AGGTAVHYRCDEQSEWYPDIDDIRSKITS------RT 282 (517)
T ss_pred HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHH-CCCEEEEeecCcccCCCCCHHHHHHhcCc------Cc
Confidence 999999999999999999999999999999999999998885 89999999998888899999999998864 78
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
|+|+++|||||||.+++.+++++|+++|++|+++||+||+|.++.|++..+.++.++.++ ..+++++||||.|+
T Consensus 283 k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~------~~vi~~~S~SK~~~ 356 (517)
T PRK13355 283 KAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPD------LFCVTFSGLSKSHM 356 (517)
T ss_pred eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCC------CeEEEEecchhhcc
Confidence 999999999999999999999999999999999999999999999987667777776432 35788899999999
Q ss_pred CCCceeEEEeec-CHH----HHHHHHHcccc-CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 046900 282 LPGFRVGTIYSY-NDK----VVTTARRMSSF-TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-G 354 (442)
Q Consensus 282 ~~G~RiG~i~~~-~~~----~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 354 (442)
++|||+||++++ ++. +.+.+...... ..++.++|.++..+|.......+++.+.++ +.++|+++.+.|++. |
T Consensus 357 ~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~-~~~~r~~l~~~L~~~~g 435 (517)
T PRK13355 357 IAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGR-VYEQRELVYNALNAIPG 435 (517)
T ss_pred CcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHH-HHHHHHHHHHHHhcCCC
Confidence 999999999963 232 23333332322 457789999999999764334566666544 456689999999987 8
Q ss_pred CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 355 IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 355 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+++.+|+|+||+|++++.... ...++.+++..+++++||.|.||+.|+...++||||+|+. +++++++++++|++++
T Consensus 436 ~~~~~p~g~fy~~~~l~~~~~--~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~-~~~~l~~a~~rl~~~~ 512 (517)
T PRK13355 436 ISAVKPKAAFYIFPKIDVKKF--NIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLP-RLEDLEDAMDRLADFF 512 (517)
T ss_pred cccCCCCeeeEEEeecCcccC--CCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCC-CHHHHHHHHHHHHHHH
Confidence 999999999999999874210 0112456777777777999999999976667899999976 8999999999999999
Q ss_pred HHHH
Q 046900 435 QKRE 438 (442)
Q Consensus 435 ~~~~ 438 (442)
++++
T Consensus 513 ~~~~ 516 (517)
T PRK13355 513 SYYR 516 (517)
T ss_pred HHhh
Confidence 8654
No 15
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=6.4e-54 Score=423.69 Aligned_cols=352 Identities=23% Similarity=0.404 Sum_probs=295.6
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEEE
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~ 125 (442)
.++|+|+.+.+.++ ++.+.+.+.+.... ...+|++..|.++||+++++|+++.++ ++++++ +|++
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~-----------~~~~Y~~~~G~~~Lr~aia~~~~~~~g--~~~~~~~~I~v 120 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRD-----------GKNQYARGFGVPELNSAIAERFKKDTG--LVVDPEKEVTV 120 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhc-----------CCCCcCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCCEEE
Confidence 37899999987764 35555555543211 135799999999999999999998876 557887 7999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++.+++++||.|++++|+|+.+...++. .|++++.+++++++ |.+|++.|++.+.. ++|+|+
T Consensus 121 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~-~g~~~~~v~~~~~~-~~~~~~~l~~~~~~------~~k~i~ 192 (413)
T PLN00175 121 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM-AGAKIKTVTLRPPD-FAVPEDELKAAFTS------KTRAIL 192 (413)
T ss_pred eCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHH-cCCEEEEEECCccc-CCCCHHHHHHhcCc------CceEEE
Confidence 99999999999999999999999999999999999985 99999999997644 88999999998864 789999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++ .+.++.++... .+++|+++||||.|++||+
T Consensus 193 i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~s~~~~~~~-----~~~vi~i~SfSK~~~~~G~ 266 (413)
T PLN00175 193 INTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG-DHISMASLPGM-----YERTVTMNSLGKTFSLTGW 266 (413)
T ss_pred ecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC-cccChhhCCCC-----cCcEEEEecchhhccCcch
Confidence 99999999999999999999999999999999999999998865 34466655431 4789999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||++++ +.+.+.+..... .+.++++.|.++..+|++. +.|+++.++.|+++++.+.+.|++.|+.+..|+||
T Consensus 267 RiG~~v~~-~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~ 342 (413)
T PLN00175 267 KIGWAIAP-PHLTWGVRQAHSFLTFATATPMQWAAVAALRAP---ESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGT 342 (413)
T ss_pred heeeeEeC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCee
Confidence 99999995 556555554432 3677899999999999864 35788899999999999999999999999999999
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC---CCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS---EPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~---~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|+|++++... ..++.+++..|++++||.+.||+.|+.. ..+++||+++. +++++++++++|+++++
T Consensus 343 ~f~~~~~~~~~----~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~-~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 343 YFVMVDHTPFG----FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK-DEETLRAAVERMKTKLK 412 (413)
T ss_pred EEEEEeccccC----CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 99999985311 0125788999988779999999999642 35799999997 89999999999998875
No 16
>PLN02231 alanine transaminase
Probab=100.00 E-value=3.1e-53 Score=427.04 Aligned_cols=349 Identities=21% Similarity=0.366 Sum_probs=283.6
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC-CCCeEEEcCCCCcChHHhHhhhcC
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD-PGDALLVPTPYYPGFDRDLRWRTG 166 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~-~gd~Vl~~~p~y~~~~~~~~~~~G 166 (442)
...|++..|.++||++||+|+.+++| +++++++|++|+|+++++.+++.+|+. +||.|+++.|+|+.|...+.. .|
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g--~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~-~g 237 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIAL-HG 237 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccC--CCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHH-cC
Confidence 46799999999999999999998766 568899999999999999999999984 799999999999999999985 99
Q ss_pred cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 167 ~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
+++++++++++++|.+|+++|++.+++...++.++|+++++|||||||.++|.+++++|+++|++|+++||+||+|.++.
T Consensus 238 ~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~ 317 (534)
T PLN02231 238 GTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENV 317 (534)
T ss_pred CEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcc
Confidence 99999999987789999999999998765555578999999999999999999999999999999999999999999999
Q ss_pred CC-CCCcccHHHHHhhhcCCC-CCcEEEEecCcccC-CCCCceeEEEeec--CHHHHHHHHHcccc-CCCcHHHHHHHHH
Q 046900 247 FS-SSEFVSIAEILEARQYKD-SERVHIVYSLSKDL-GLPGFRVGTIYSY--NDKVVTTARRMSSF-TLISSQTQYLLAS 320 (442)
Q Consensus 247 ~~-~~~~~s~~~~~~~~~~~~-~~~vi~~~S~SK~~-g~~G~RiG~i~~~--~~~~~~~~~~~~~~-~~~s~~~q~~~~~ 320 (442)
|+ +..+.++.++..+.+... ..++++++||||.+ |+||+|+||++++ ++.+.+.+.+.... ...+.+.|.++..
T Consensus 318 y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~ 397 (534)
T PLN02231 318 YVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASL 397 (534)
T ss_pred cCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHH
Confidence 95 456778877754311111 13699999999975 8999999999873 56677666544433 3345678888888
Q ss_pred HhcCc----hhHHHH---HHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEec--CCc-ccc---cChhhHHHHH
Q 046900 321 MLSNK----KFTENY---IKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNL--SPL-LEE---QTREGELALW 386 (442)
Q Consensus 321 ~l~~~----~~~~~~---~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~--~~~-~~~---~~~~~~~~l~ 386 (442)
+++.+ ..++++ ...+++.|+++++.+.+.|++. |+.+.+|+||||+|+++ +.. ... .....+..++
T Consensus 398 ~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~ 477 (534)
T PLN02231 398 VMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYC 477 (534)
T ss_pred HhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHH
Confidence 88642 122443 3456889999999999999987 89999999999999655 321 000 0001234567
Q ss_pred HHHHHcCcEEEeCCCCCCCC-CCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 387 DSMLHEVKLNISPGSSCHCS-EPGWFRVCFANMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 387 ~~l~~~~gi~v~pg~~f~~~-~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
..|++++||.+.||+.|+.. +..+||+++.. ++++++++++||++++++.-++
T Consensus 478 ~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~-~~e~l~eal~RL~~~~~~~~~~ 531 (534)
T PLN02231 478 KRLLNATGIVVVPGSGFGQVPGTWHFRCTILP-QEDKIPAIVSRLTEFHKSFMDE 531 (534)
T ss_pred HHHHHhcCEEEeCCcccCCCCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889999999999853 34579999986 8999999999999998876543
No 17
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=6.8e-54 Score=421.94 Aligned_cols=352 Identities=22% Similarity=0.362 Sum_probs=291.2
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~ 124 (442)
+.++|+|+.+.+.++ ++.+.+.+...... .....|++..|.++||+++|+|+.+.+| .+++++ +|+
T Consensus 31 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~----------~~~~~Y~~~~g~~~lr~aia~~~~~~~g--~~~~~~~~i~ 98 (389)
T PRK08068 31 GHDVINLGQGNPDQPTPEHIVEALQEAAEN----------PANHKYSPFRGYPFLKEAAADFYKREYG--VTLDPETEVA 98 (389)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHHhC----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCccEE
Confidence 346899999976654 34455555443211 1245798889999999999999988776 557888 899
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++..++.+++++||.|++++|+|+.|...++. .|++++.+|++++++|.+|++++++.+.+ +++++
T Consensus 99 it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~-~g~~~~~i~~~~~~~~~~d~~~l~~~~~~------~~~~v 171 (389)
T PRK08068 99 ILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVAL-ARAQFETMPLIAENNFLPDYTKIPEEVAE------KAKLM 171 (389)
T ss_pred EcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHh-cCCEEEEeecccccCCCCCHHHHHHhccc------cceEE
Confidence 999999999999999999999999999999999999885 99999999998777899999999988764 78899
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++||||||||.++|.+++++|+++|++++++||+||+|.++.|++..+.++..... ..+++++++||||.||+||
T Consensus 172 ~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~-----~~~~~i~~~S~SK~~g~~G 246 (389)
T PRK08068 172 YLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPG-----AKDVGIELYTLSKTFNMAG 246 (389)
T ss_pred EEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCC-----ccCCEEEEecchhccCCcc
Confidence 99999999999999999999999999999999999999998887544445444322 1468899999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccccC--CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSFT--LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||+++ ++.+.+.+.+....+ +.+++.|.++..++.+. .++++..++.++++|+.+.+.|++.|+.+.+|.|
T Consensus 247 lRiG~~~~-~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~g 322 (389)
T PRK08068 247 WRVAFAVG-NESVIEAINLLQDHLFVSLFGAIQDAAIEALLSD---QSCVAELVARYESRRNAFISACREIGWEVDAPKG 322 (389)
T ss_pred ceeEeEec-CHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCe
Confidence 99999998 566776666554443 33456788887777643 2567888999999999999999999998888999
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
|+|+|++++... ++.++++.|++++||.|.||+.|+..+++++||+++. +++.+++++++|+++
T Consensus 323 ~~~~~v~~~~~~------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~ 386 (389)
T PRK08068 323 SFFAWMPVPKGY------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DEERLREAVERIGKL 386 (389)
T ss_pred eEEEEEECCCCC------CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CHHHHHHHHHHHHHh
Confidence 999999998643 2678999998767999999999976557899999987 788899999998764
No 18
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.1e-53 Score=420.26 Aligned_cols=367 Identities=22% Similarity=0.359 Sum_probs=299.5
Q ss_pred CCCCCCceeeeeccccc----c-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCc
Q 046900 43 ESTNPSGVIQMGLAENQ----V-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK 117 (442)
Q Consensus 43 ~~~~~~~~i~l~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~ 117 (442)
...++.++|+|+++++. + +++.+.+.+.+.... .....|++..|.++||+++++|+++.+| +.
T Consensus 26 ~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~ 93 (409)
T PLN02656 26 DEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQS----------NKFNGYAPTVGLPQARRAIAEYLSRDLP--YK 93 (409)
T ss_pred ccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhc----------CCCCCCCCCCCCHHHHHHHHHHHHHhcC--CC
Confidence 44567899999999885 3 345555555443211 1245798889999999999999998766 45
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
+++++|++|+|+++++.+++.+++++||.|++++|+|+.+...+.. .|++++.++++++++|.+|++.+++.+++
T Consensus 94 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~i~~~~~~~~~~d~~~l~~~~~~---- 168 (409)
T PLN02656 94 LSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAF-RHLEVRYVDLLPEKGWEVDLDAVEALADQ---- 168 (409)
T ss_pred CCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHH-cCCEEEEEeCCCcCCCCCCHHHHHHHhcc----
Confidence 7899999999999999999999999999999999999999888874 89999999997666789999999988764
Q ss_pred CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCc
Q 046900 198 DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLS 277 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~S 277 (442)
+++++++++||||||.+++.+++++|+++|++++++||+||+|.++.|++..+.++..+.. ..++|+++|||
T Consensus 169 --~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~------~~~vi~~~SfS 240 (409)
T PLN02656 169 --NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGS------IVPVLTLGSLS 240 (409)
T ss_pred --CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcc------cCcEEEEcccc
Confidence 6789999999999999999999999999999999999999999999997765556655533 36899999999
Q ss_pred ccCCCCCceeEEEeecC-------HHHHHHHHHcccc-CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Q 046900 278 KDLGLPGFRVGTIYSYN-------DKVVTTARRMSSF-TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEG 349 (442)
Q Consensus 278 K~~g~~G~RiG~i~~~~-------~~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 349 (442)
|.|++||+|+||+++++ +.+.+.+.+.... ..++.+.|.++..++++.. +.++++.++.++++|+.+.+.
T Consensus 241 K~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~~~~~~r~~~~~~ 318 (409)
T PLN02656 241 KRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTD--ESFFKKTINILKQSSDICCDR 318 (409)
T ss_pred hhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999853 4566666554333 4568899999999997532 457888899999999999999
Q ss_pred HHhC-CCe-eecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHH
Q 046900 350 LRSA-GIE-CLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVAL 427 (442)
Q Consensus 350 L~~~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l 427 (442)
|++. ++. +..|+||+|+|++++..... ...++.+++..+++++||.+.||+.|+. ++|+||+++. +++++++++
T Consensus 319 L~~~~~~~~~~~p~gg~~~w~~l~~~~~~-~~~~~~~~~~~~l~~~gV~v~pg~~fg~--~~~iRi~~~~-~~e~l~eal 394 (409)
T PLN02656 319 IKEIPCITCPHKPEGSMAVMVKLNLSLLE-DISDDIDFCFKLAREESVIILPGTAVGL--KNWLRITFAA-DPSSLEEAL 394 (409)
T ss_pred HhhCCCCcCCcCCCeEEEEEEecchhhcC-CCCCHHHHHHHHHHhCCEEEecchhcCC--CCeEEEEeCC-CHHHHHHHH
Confidence 9886 333 35789999999998742100 0012445666666777999999999963 6899999997 899999999
Q ss_pred HHHHHHHHHHHhh
Q 046900 428 KRIHNFMQKRERR 440 (442)
Q Consensus 428 ~~l~~~l~~~~~~ 440 (442)
++|++++.+++..
T Consensus 395 ~rl~~~~~~~~~~ 407 (409)
T PLN02656 395 GRIKSFYLRHSKT 407 (409)
T ss_pred HHHHHHHHHhccc
Confidence 9999999887654
No 19
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.1e-53 Score=419.99 Aligned_cols=376 Identities=19% Similarity=0.350 Sum_probs=296.7
Q ss_pred hhhhhhcCCCCCCCCCCceeeeeccccc----c-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHH
Q 046900 32 GWKAYDENPYEESTNPSGVIQMGLAENQ----V-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMAS 106 (442)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~i~l~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 106 (442)
+|.....+.+.. ...+++|+|+.+++. + +++.+.+.+.+.... ....+|++..|.++||++||+
T Consensus 17 ~~~~~~~~~~~~-~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~----------~~~~~Y~~~~G~~~lr~aia~ 85 (409)
T PLN00143 17 DAVKFLKENFNE-DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRS----------AKFNSYAPTGGILPARRAIAD 85 (409)
T ss_pred HHHHHHHHhccc-CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhC----------cCCCCCCCCCCCHHHHHHHHH
Confidence 444433443333 335689999999885 4 345565555543321 123569888999999999999
Q ss_pred HHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHH
Q 046900 107 FMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQA 186 (442)
Q Consensus 107 ~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~ 186 (442)
|+.+.+| +.+++++|++|+|+++++.+++.+++++||.|++++|+|+.|...+.. .|++++.++++++++|.+|++.
T Consensus 86 ~~~~~~g--~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~ 162 (409)
T PLN00143 86 YLSNDLP--YQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIF-HHLEIRHFDLLPEKGWEVDLDA 162 (409)
T ss_pred HHHhhcC--CCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHH-cCCEEEEEeccCCCCCcCCHHH
Confidence 9998766 557899999999999999999999999999999999999999998885 9999999998766689999999
Q ss_pred HHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCC
Q 046900 187 LEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKD 266 (442)
Q Consensus 187 l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~ 266 (442)
|++++++ ++++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.|++..+.++..+..
T Consensus 163 l~~~~~~------~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~------ 230 (409)
T PLN00143 163 VEAIADE------NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFAS------ 230 (409)
T ss_pred HHHhccc------CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcc------
Confidence 9988754 6789999999999999999999999999999999999999999999987655555555433
Q ss_pred CCcEEEEecCcccCCCCCceeEEEeec-CHHH------HHHHHHccc-cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 046900 267 SERVHIVYSLSKDLGLPGFRVGTIYSY-NDKV------VTTARRMSS-FTLISSQTQYLLASMLSNKKFTENYIKTNRER 338 (442)
Q Consensus 267 ~~~vi~~~S~SK~~g~~G~RiG~i~~~-~~~~------~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 338 (442)
.+++|+++||||.|++||+|+||++++ ++.+ .+.+.+... ....+.++|.++.+++.+.. ..++++.++.
T Consensus 231 ~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~--~~~~~~~~~~ 308 (409)
T PLN00143 231 IVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTT--EDFFSKTINI 308 (409)
T ss_pred cCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcCh--HHHHHHHHHH
Confidence 368999999999999999999999984 3322 222333322 22357799999999997532 3467777888
Q ss_pred HHHHHHHHHHHHHhCCC-ee-ecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee
Q 046900 339 LQKRYQMIIEGLRSAGI-EC-LKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA 416 (442)
Q Consensus 339 ~~~~~~~l~~~L~~~g~-~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~ 416 (442)
++++++.+.+.|.+.+. .+ ..|+||+|+|++++.... ....++.+++..+++++||.+.||+.|+ .++|+||+++
T Consensus 309 ~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~-~~~~~~~~~~~~ll~~~gV~v~pg~~f~--~~~~iRi~~~ 385 (409)
T PLN00143 309 LRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLL-EDIEDDMEFCLKLAKEESLIILPGVTVG--LKNWLRITFA 385 (409)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhc-CCCCCHHHHHHHHHHhCCEEEeCccccC--CCCeEEEEEc
Confidence 88889999999987643 32 368899999999975210 0111256777777777799999999995 3689999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 417 NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 417 ~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
. +++++++++++|+++++++.+
T Consensus 386 ~-~~~~l~~al~rl~~~l~~~~~ 407 (409)
T PLN00143 386 V-EQSSLEDGLGRLKSFCGRHAK 407 (409)
T ss_pred C-CHHHHHHHHHHHHHHHHHhcc
Confidence 7 799999999999999987754
No 20
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=2e-53 Score=419.96 Aligned_cols=361 Identities=20% Similarity=0.374 Sum_probs=292.7
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~ 124 (442)
+.++|+|+.++++++ ++.+.+.+...... .....|+++.|.++||+++|+|+++++| +.++++ +|+
T Consensus 29 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~I~ 96 (405)
T PRK09148 29 GADIIDLGMGNPDLPTPQHIVDKLCETAQD----------PRTHRYSASKGIPGLRRAQAAYYARRFG--VKLNPDTQVV 96 (405)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHcC----------cccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 457899999987654 23333333332111 1246799999999999999999998776 456787 899
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++.+++.+++++||+|++++|+|+.+...+.. .|++++.++++.++.|. +.+++.++.. ..+++++
T Consensus 97 it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~-~g~~v~~v~~~~~~~~~---~~l~~~~~~~---~~~~~~v 169 (405)
T PRK09148 97 ATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIM-AGGVIRSVPAEPDEEFF---PALERAVRHS---IPKPIAL 169 (405)
T ss_pred EcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHh-cCCEEEEEeCCCCCCCc---cCHHHHHhhc---cccceEE
Confidence 999999999999999999999999999999999888884 89999999997666554 3444444321 1377899
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++..+.++..+... .+++++++||||.||+||
T Consensus 170 ~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~-----~~~~i~~~SfSK~~~~pG 244 (405)
T PRK09148 170 IVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGA-----KDVTVEFTSMSKTFSMAG 244 (405)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCc-----cCcEEEEeccccccCCcc
Confidence 999999999999999999999999999999999999999998876555566654321 367889999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||+++ ++.+.+.+.+... .+.+++++|.++..++.+. ++++++.++.++++++.+.+.|++.|+.+..|++
T Consensus 245 lR~G~~v~-~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~ 320 (405)
T PRK09148 245 WRMGFAVG-NERLIAALTRVKSYLDYGAFTPIQVAATAALNGP---QDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAA 320 (405)
T ss_pred hheeeeeC-CHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCe
Confidence 99999998 5667777665544 3566889999999999753 4578889999999999999999998888778999
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
|+|+|++++...... +..+++..+++++||.|.||..|+...++|+||+++. +.+++++++++|.+++.++..
T Consensus 321 g~f~~~~l~~~~~~~---~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~-~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 321 SMFAWAPIPEAFRHL---GSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVE-NEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred eEEEEEECCCccCCC---CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHHHH
Confidence 999999998642211 2568888888767999999999975556899999986 899999999999999987653
No 21
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-53 Score=417.64 Aligned_cols=348 Identities=22% Similarity=0.424 Sum_probs=291.9
Q ss_pred CceeeeecccccccH-H-HHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 48 SGVIQMGLAENQVSF-D-LLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
.++|+|+.+++.+++ + .++..+.... .....|+++.|.++||+++|+|+.+.++ +.+++++|++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~~i~i 94 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAK------------KGHTRYTDSGGDVELIEEIIKYYSKNYD--LSFKRNEIMA 94 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCChhhEEE
Confidence 367999999887643 3 3333333221 1246799999999999999999988776 5578999999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++.+++++||.|++++|+|+.+...+.. .|++++.++++++++|.+|++.|++.+++ ++++++
T Consensus 95 t~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~ 167 (384)
T PRK06348 95 TVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEM-VGGKPIILETYEEDGFQINVKKLEALITS------KTKAII 167 (384)
T ss_pred cCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHH-cCCEEEEecCCcCcCCcCCHHHHHHhhCc------CccEEE
Confidence 99999999999999999999999999999999999985 89999999986666789999999998864 778999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++||||||.++|.+++++|+++|++++++||+||+|.++.+++ .+.++.++.. ..+++++++||||.+|+||+
T Consensus 168 l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~-----~~~~vi~~~SfSK~~~l~Gl 241 (384)
T PRK06348 168 LNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAG-----MPERTITFGSFSKDFAMTGW 241 (384)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCC-----CcCcEEEEecchhccCCccc
Confidence 99999999999999999999999999999999999999998865 3445555532 14789999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNA 362 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 362 (442)
|+||++++ +.+.+.+..... .+.++++.|.++..++... ++++++.++.++++++.+.+.|++. ++.+..|+|
T Consensus 242 RiG~~v~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~g 317 (384)
T PRK06348 242 RIGYVIAP-DYIIETAKIINEGICFSAPTISQRAAIYALKHR---DTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKG 317 (384)
T ss_pred cceeeecC-HHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCe
Confidence 99999994 666666655443 3567889999999998753 5577888999999999999999886 778888999
Q ss_pred eEEEEEecCC-cccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSP-LLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 363 g~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
|||+|++++. .. ++.++++.+++++||.+.||+.|+..+.+++||+++. +++++++++++|+++
T Consensus 318 g~~~~~~~~~~~~------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~ 382 (384)
T PRK06348 318 SIYAFINIKKTGL------SSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTV-GIEVLEEAFNRIEKM 382 (384)
T ss_pred eEEEEEecccCCC------CHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecC-CHHHHHHHHHHHHhh
Confidence 9999999974 22 2678888888777999999999976556899999986 899999999999764
No 22
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.5e-53 Score=420.93 Aligned_cols=364 Identities=22% Similarity=0.381 Sum_probs=297.7
Q ss_pred CCceeeeeccccc----cc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 47 PSGVIQMGLAENQ----VS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 47 ~~~~i~l~~~~n~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
..++|+|+.+++. ++ ++.+.+.+.+.... .....|++..|.+++|+++|+|+++.++ .+++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~----------~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~~ 118 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRS----------GKYNSYSTCVGLLPARRAIAEYLSRDLP--YELSTD 118 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHc----------CcCCCCCCCccCHHHHHHHHHHHhhccC--CCCChh
Confidence 4579999999874 22 24444444433211 1234799989999999999999988766 457899
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
+|++|+|+++++.+++.+|+++||+|+++.|+|+.|...+.. .|++++.+++.++.+|.+|++.+++.+++ ++
T Consensus 119 ~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 191 (430)
T PLN00145 119 DIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVF-SGLEVRHFDLLPERGWEVDLEGVEALADE------NT 191 (430)
T ss_pred hEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHH-cCCEEEEeeCCcccCCcCCHHHHHHHhCc------Cc
Confidence 999999999999999999999999999999999999888884 89999999987777899999999988765 78
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
++++++|||||||.+++.+++++|+++|++++++||+||+|.++.|++..+.++..+.. ..+||+++||||.|+
T Consensus 192 ~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~------~~~vi~~~S~SK~~~ 265 (430)
T PLN00145 192 VAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGE------VAPVLTLGSISKRWV 265 (430)
T ss_pred eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcc------cCcEEEEeccccccC
Confidence 89999999999999999999999999999999999999999999987766667665543 368999999999999
Q ss_pred CCCceeEEEeec-CHHHH------HHHHHccccC-CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 282 LPGFRVGTIYSY-NDKVV------TTARRMSSFT-LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 282 ~~G~RiG~i~~~-~~~~~------~~~~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+||||+||++++ ++.+. ..++.....+ ..+++.|.++..+|.... +.+++++++.++++++.+.+.|++.
T Consensus 266 ~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~ 343 (430)
T PLN00145 266 VPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTK--EEFFTKTLGLLKETADICYEKIKEI 343 (430)
T ss_pred CCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999973 23222 2333333332 357899999999998632 5678889999999999999999886
Q ss_pred -CCee-ecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHH
Q 046900 354 -GIEC-LKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIH 431 (442)
Q Consensus 354 -g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~ 431 (442)
|+.+ ..|+|++|+|++++.... ....++.+++.+|++++||.+.||+.|+. ++|+||+|+. +.+++++++++|+
T Consensus 344 ~g~~~~~~P~ga~y~~v~l~~~~~-~~~~~~~~~~~~ll~~~gV~v~pG~~fg~--~~~lRis~~~-~~~~l~~al~rl~ 419 (430)
T PLN00145 344 KCITCPHKPEGSMFVMVKLDLSCL-SGIKDDMDFCCKLAKEESVVVLPGSALGM--KNWLRITFAI-DPPSLEDGLERLK 419 (430)
T ss_pred CCCCCCcCCCeeeEEEeccChhhc-CCCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCC-CHHHHHHHHHHHH
Confidence 7775 479999999999874210 00113567888888888999999999974 6899999997 8999999999999
Q ss_pred HHHHHHHhhc
Q 046900 432 NFMQKRERRR 441 (442)
Q Consensus 432 ~~l~~~~~~~ 441 (442)
+++.++++..
T Consensus 420 ~~~~~~~~~~ 429 (430)
T PLN00145 420 SFCLRHAKLA 429 (430)
T ss_pred HHHHHhcccc
Confidence 9999988764
No 23
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2.1e-53 Score=417.89 Aligned_cols=351 Identities=23% Similarity=0.402 Sum_probs=292.7
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~ 124 (442)
..++++|+.+++.++ ++.+.+.+.+.... ....+|+++.|.++||+++|+|+++.++ ++++++ +|+
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~~~vi 95 (383)
T TIGR03540 28 GVDVISLGIGDPDLPTPKHIVEALCKAAEN----------PENHRYPSYEGMLAYRQAVADWYKRRFG--VELDPETEVL 95 (383)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhC----------CCCCCCCCCCCCHHHHHHHHHHHHHhhC--CCCCCCCeEE
Confidence 347899999988764 34444444433211 1246799999999999999999998766 446676 699
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++..++.+++++||.|++++|+|+.+...++. .|++++.+|++++++|.+|++++++.+.+ +++++
T Consensus 96 ~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~-~G~~v~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v 168 (383)
T TIGR03540 96 SLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLF-AGGEPYEMPLKEENGFLPDFDAIPEDIAK------KAKLM 168 (383)
T ss_pred ECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHh-cCCEEEEEecCcccCCccCHHHHHhhccc------cceEE
Confidence 999999999999999999999999999999999998884 99999999998777888999999988764 78999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++|||||||.+++.+++++|+++|++|+++||+||+|.++.|++..+.++.+++.. .+++++++||||.||++|
T Consensus 169 ~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~-----~~~~i~~~SfSK~~g~~G 243 (383)
T TIGR03540 169 FINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGA-----KDVGIEFHSLSKTYNMTG 243 (383)
T ss_pred EEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCc-----ccCEEEEEecccccCCcc
Confidence 999999999999999999999999999999999999999998876555565555321 367899999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||+++ ++.+.+.+...... ...+.+.|.++..++.+. .+|+++.++.++++++.+.+.|++.|+.+..+++
T Consensus 244 lRiG~~i~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~ 319 (383)
T TIGR03540 244 WRIGMAVG-NADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP---QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPKA 319 (383)
T ss_pred ceeeEEeC-CHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCCc
Confidence 99999998 45666665544332 456778999999999764 4578888999999999999999999999888999
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHN 432 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~ 432 (442)
|+|+|++++... +..+++.++++++||.+.||+.|+...++++||+++. +++++++++++|++
T Consensus 320 ~~~~~~~l~~~~------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 320 TFYVWVPVPEGY------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV-PDERLEEAVARIKK 382 (383)
T ss_pred ceEEEEECCCCC------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC-CHHHHHHHHHHHhh
Confidence 999999998643 2578888888777999999999975556899999986 78899999998875
No 24
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-53 Score=417.41 Aligned_cols=351 Identities=23% Similarity=0.393 Sum_probs=293.0
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~ 124 (442)
..++|+|+.++++++ ++.+.+.+.+.... .....|+++.|+++||+++|+|+++.+| ..++++ +|+
T Consensus 30 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~ii 97 (385)
T PRK09276 30 GVDVISLGIGDPDLPTPDHIIEAMCKAVED----------PENHQYPSYEGMLEFRKAVADWYKRRFG--VELDPETEVI 97 (385)
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHhC----------CCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 346799999988764 45556555543211 1235799999999999999999998766 456776 599
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++..++.+++++||.|++++|+|+.|...++. .|++++.+|++.+++|.+|++.+++.+.+ ++++|
T Consensus 98 ~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~-~g~~~~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v 170 (385)
T PRK09276 98 SLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIF-AGGEPYFMPLKEENGFLPDLDAIPEDVAK------KAKLM 170 (385)
T ss_pred EccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHH-cCCEEEEEecCCCCCCcCCHHHHHHhccc------cceEE
Confidence 999999999999999999999999999999999998884 99999999998766788999999887754 78999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++..+.++.++... .+++|+++||||.||++|
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-----~~~~i~~~S~SK~~g~~G 245 (385)
T PRK09276 171 FINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGA-----KDVGIEFHSLSKTYNMTG 245 (385)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCC-----cCCEEEEecchhhcCCcc
Confidence 999999999999999999999999999999999999999998876555666655321 367899999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||+++ ++.+.+.+.+.... ..++.+.|.++..++.+. ++|+++.++.++++++.+.+.|++.|+++..|++
T Consensus 246 lRiG~~i~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 321 (385)
T PRK09276 246 WRIGFAVG-NADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGP---QEVVEELRKIYQERRDILVEGLRKLGLEVEPPKA 321 (385)
T ss_pred hhheeeeC-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCc---HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc
Confidence 99999998 45666666554332 345678899999988752 5678888999999999999999998988888999
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHN 432 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~ 432 (442)
|+|+|++++... +..+++++|++++||.+.||..|+...++++||+++. +++++.+++++|.+
T Consensus 322 ~~~~~v~~~~~~------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 384 (385)
T PRK09276 322 TFYVWAPVPKGY------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV-PDERIEEAVERIKK 384 (385)
T ss_pred ceEEEEECCCCC------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHhh
Confidence 999999998643 2678888988777999999999976556899999986 88899999999864
No 25
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=5.1e-53 Score=418.21 Aligned_cols=365 Identities=20% Similarity=0.387 Sum_probs=300.8
Q ss_pred CCCCceeeeeccccc-----ccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhC----CC
Q 046900 45 TNPSGVIQMGLAENQ-----VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRG----GR 115 (442)
Q Consensus 45 ~~~~~~i~l~~~~n~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~----~~ 115 (442)
.++.++|+|+.+.+. .+++.+.+.+.+.... ....+|+++.|.++||++||+|+++.++ .+
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~----------~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~ 99 (412)
T PTZ00433 30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDS----------QECNGYPPTVGSPEAREAVATYWRNSFVHKESLK 99 (412)
T ss_pred CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhc----------CCCCCCCCCCCcHHHHHHHHHHHHhhcccccccc
Confidence 356789999998864 3556666666554321 1246799999999999999999987643 13
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
..+++++|++|+|+++++.+++.+++++||.|+++.|+|+.+...++. .|++++.++++++.+|.+|++++++.+++
T Consensus 100 ~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~-~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-- 176 (412)
T PTZ00433 100 STIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKA-YGIEMRFYNCRPEKDWEADLDEIRRLVDD-- 176 (412)
T ss_pred CCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHH-cCCEEEEEecCccccCcCCHHHHHHHhcc--
Confidence 457899999999999999999999999999999999999999999885 99999999998766789999999988764
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEec
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYS 275 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S 275 (442)
++++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+.. ..++++++|
T Consensus 177 ----~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~------~~~~i~~~S 246 (412)
T PTZ00433 177 ----RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDT------TVPRVILGG 246 (412)
T ss_pred ----CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccC------CCceEEEcc
Confidence 7889999999999999999999999999999999999999999999987655556666643 246889999
Q ss_pred CcccCCCCCceeEEEeec-----CHHHHHHHHHccc-cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Q 046900 276 LSKDLGLPGFRVGTIYSY-----NDKVVTTARRMSS-FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEG 349 (442)
Q Consensus 276 ~SK~~g~~G~RiG~i~~~-----~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 349 (442)
|||.||+||+|+||++++ .+.+.+.+++... .+.++++.|.++..++.+. .+.|+++.++.++++++.+.+.
T Consensus 247 fSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~r~~l~~~ 324 (412)
T PTZ00433 247 TAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNT--PQEHLEQIVAKLEEGAMVLYNH 324 (412)
T ss_pred chhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999972 1345555555433 3568999999999998763 2567888999999999999999
Q ss_pred HHhC-CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHH
Q 046900 350 LRSA-GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALK 428 (442)
Q Consensus 350 L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~ 428 (442)
|++. |+.+..|++|+|+|++++...- ....++.++++.|++++||.+.||+.|+. ++|+||+++. ++++++++++
T Consensus 325 L~~~~~~~~~~p~gg~f~~~~l~~~~~-~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~~iRis~~~-~~e~l~~al~ 400 (412)
T PTZ00433 325 IGECIGLSPTMPRGSMFLMSRLDLEKF-RDIKSDVEFYEKLLEEENVQVLPGEIFHM--PGFTRLTISR-PVEVLREAVE 400 (412)
T ss_pred HhcCCCCcccCCCeeEEEEEEechhhc-CCCCCHHHHHHHHHHhcCEEEeCccccCC--CCeEEEEecC-CHHHHHHHHH
Confidence 9885 7888889999999999874100 00012568889998766999999999964 6799999997 7889999999
Q ss_pred HHHHHHHHHH
Q 046900 429 RIHNFMQKRE 438 (442)
Q Consensus 429 ~l~~~l~~~~ 438 (442)
+|.+++++++
T Consensus 401 ~l~~~~~~~~ 410 (412)
T PTZ00433 401 RIKAFCERHK 410 (412)
T ss_pred HHHHHHHHhc
Confidence 9999998765
No 26
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=2.5e-53 Score=416.73 Aligned_cols=354 Identities=24% Similarity=0.427 Sum_probs=294.6
Q ss_pred CceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEEE
Q 046900 48 SGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~ 125 (442)
.++|+|+.++++++. +.+.+.+.+... .....|++..|.++||+++|+|+++.+| +.++++ +|++
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~i~~ 86 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLE-----------QGYTSYTANAGLLELRQEIAKYLKKRFA--VSYDPNDEIIV 86 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHh-----------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEEE
Confidence 478999999987743 333444333221 1235698889999999999999998876 456775 7999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++.+++++||.|++++|+|+.+...++. .|.+++.++++.+++|.+|++++++++.+ ++++++
T Consensus 87 t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~ 159 (378)
T PRK07682 87 TVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTL-AGGVPVPVATTLENEFKVQPAQIEAAITA------KTKAIL 159 (378)
T ss_pred eCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHH-cCCEEEEeecCCccCCCCCHHHHHhhcCc------ccEEEE
Confidence 99999999999999999999999999999999998885 89999999987666788999999998864 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++. +.++..+.. ..+++++++||||.||+||+
T Consensus 160 ~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~-----~~~~~i~~~S~SK~~~~~Gl 233 (378)
T PRK07682 160 LCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKG-----MRERTILISGFSKGFAMTGW 233 (378)
T ss_pred EECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhccc-----ccCCEEEEecCcccccChhh
Confidence 999999999999999999999999999999999999999998753 445555432 13689999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||+++ ++.+.+.+..... .+.++++.|.++..+|++.. .++++.++.++++++.+.+.|++.|+++..|+||
T Consensus 234 R~G~~~~-~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~g~ 309 (378)
T PRK07682 234 RLGFIAA-PVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGN---DDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGA 309 (378)
T ss_pred hhhhhhc-CHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCee
Confidence 9999999 4566666654332 25578899999999998653 3577889999999999999999999998899999
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+|+|+.++.... ++.++++.+++++||.+.||..|+...++++|||++. +++++++++++|++++++.
T Consensus 310 ~~~~~~~~~~~~-----~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 310 FYAFPSISSTGL-----SSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred EEEEEeccCCCC-----CHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence 999998853211 2568888888666999999999976557899999998 8899999999999998753
No 27
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=8.9e-53 Score=414.56 Aligned_cols=353 Identities=20% Similarity=0.330 Sum_probs=288.0
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~ 124 (442)
..++|+|+.++++++ ++.+.+.+.+... ....|+++.|.++||+++|+|+++.++....++++ +|+
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~------------~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~ 94 (393)
T TIGR03538 27 SKPPIALSIGEPKHPTPAFVLEALRENLH------------GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVL 94 (393)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhh------------ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEE
Confidence 357799999998874 4666666665421 24679999999999999999999887643236785 899
Q ss_pred EecChHHHHHHHHHhhcCCCCe--EEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 125 VTAGATAANELLTFILADPGDA--LLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~--Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
+|+|+++++.+++++++++||. |++++|+|+.|...++. .|++++.++++++++|.+|++++++.+.+ ++|
T Consensus 95 it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k 167 (393)
T TIGR03538 95 PVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALL-AGAEPYFLNCTAENGFLPDFDAVPESVWR------RCQ 167 (393)
T ss_pred ECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHh-cCCeEEEeeccccCCCCCCHHHHHHHHhh------cce
Confidence 9999999999999999999986 99999999999998884 99999999998777899999999988865 789
Q ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC-CcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 203 GVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS-EFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 203 ~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
+++++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++. .+.+........+.+..+++|+++||||.|+
T Consensus 168 ~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 247 (393)
T TIGR03538 168 LLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSN 247 (393)
T ss_pred EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcC
Confidence 999999999999999999999999999999999999999999887642 2333322211110012478999999999999
Q ss_pred CCCceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 046900 282 LPGFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK 359 (442)
Q Consensus 282 ~~G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 359 (442)
+||+|+||++++ +.+.+.+.+... .+.++++.|.++.+.+.. ++++++.++.++++++.+.+.|++. +.+..
T Consensus 248 ~~GlRvG~~i~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~ 321 (393)
T TIGR03538 248 LPGLRSGFVAGD-AEILKAFLRYRTYHGCAMPIPTQLASIAAWND----EQHVRENRALYREKFAAVLEILGQV-LDLEL 321 (393)
T ss_pred CcccceEEEecC-HHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC----hHHHHHHHHHHHHHHHHHHHHHHhh-CcccC
Confidence 999999999995 556655554443 245688899998877754 3467888999999999999999875 56677
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC------CCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC------SEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~------~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
|.+|+|+|++++. ++.++++.+++++||.|.||+.|+. .+.+++||+++. +++++++++++|+++
T Consensus 322 p~gg~f~~~~~~~--------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 322 PDAGFYLWPKVPG--------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEECVEAAERIRSF 392 (393)
T ss_pred CCeeEEEEEECCC--------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHHHHHHHHHHHh
Confidence 9999999999982 2567888888777999999999852 235799999997 789999999999875
No 28
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-52 Score=412.52 Aligned_cols=351 Identities=24% Similarity=0.388 Sum_probs=290.2
Q ss_pred CCceeeeecccccccH--HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cE
Q 046900 47 PSGVIQMGLAENQVSF--DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RI 123 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i 123 (442)
..++|+|+.+.+..+. +.++........ .....|+++.|.++||+++|+|++++++ .+++++ +|
T Consensus 34 g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~~~~i 100 (394)
T PRK05942 34 GLDLIDLGMGNPDGAAPQPVIEAAIAALAD-----------PQNHGYPPFEGTASFRQAITDWYHRRYG--VELDPDSEA 100 (394)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhC-----------CCCccCCCCCCCHHHHHHHHHHHHHHHC--CCcCCCCeE
Confidence 3468999987654432 234433333211 1246799999999999999999998776 457787 59
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
++|+|+++++..++.+++++||+|++++|+|+.+...+.. .|++++.++++.+++|.+|++++++.+.+ ++|+
T Consensus 101 ~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 173 (394)
T PRK05942 101 LPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLI-AGAQIYPIILKPENDWLIDLSSIPEEVAQ------QAKI 173 (394)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHH-cCCEEEEeecCCccCCccCHHHHHHhccc------cceE
Confidence 9999999999999999999999999999999999888874 89999999998777899999999988864 7899
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
++++|||||||.++|.+++++|+++|++++++||+||+|.++.+++....++.++... .+++++++||||.||+|
T Consensus 174 i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~-----~~~~i~~~SfSK~~~~~ 248 (394)
T PRK05942 174 LYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGA-----KDIGVEFHTLSKTYNMA 248 (394)
T ss_pred EEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCc-----cccEEEEecchhccCCh
Confidence 9999999999999999999999999999999999999999998876555566555321 35678899999999999
Q ss_pred CceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC
Q 046900 284 GFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN 361 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 361 (442)
|+|+||+++ ++.+.+.++.... .+.+++++|.++..+++. .++++++.++.++++++++.+.|++.|+.+.+++
T Consensus 249 GlRiG~i~~-~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~ 324 (394)
T PRK05942 249 GWRVGFVVG-NRHIIQGLRTLKTNLDYGIFSALQKAAETALQL---PDSYLQQVQERYRTRRDFLIQGLGELGWNIPPTK 324 (394)
T ss_pred hhheeeeec-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Confidence 999999998 5667777665443 355778899999999964 2567888999999999999999998898888899
Q ss_pred ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 362 AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 362 ~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
+|+|+|++++.... +.+++.++++++||.+.||+.|+...++|+||+++. +.+.+.+++++|.++
T Consensus 325 ~~~f~~~~~~~~~~------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 325 ATMYLWVPCPVGMG------STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQA 389 (394)
T ss_pred eeeEEEEECCCCCC------HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 99999999986432 456777777777999999999975557899999986 788899999988764
No 29
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=8.1e-53 Score=416.62 Aligned_cols=351 Identities=23% Similarity=0.310 Sum_probs=281.9
Q ss_pred CCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|+|+.+++++++ +.+.+.+.+...... .......|++..|.++||+++|+|+.+.+| +++++++|++
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~i 104 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMG------TAETFRGYGPEQGYDFLREKIAENDYQARG--CDISADEIFI 104 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhccc------ccCCccCCCCCCCCHHHHHHHHHHHHHhcC--CcCChhhEEE
Confidence 4578999999988643 444444443321100 001346798889999999999999987766 5688999999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcE-----------EEEEecCCCCCCcCCHHHHHHHHHHH
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIK-----------IVPIHCDSSNNFQITPQALEAAYKEA 194 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~-----------v~~v~~~~~~~~~~d~~~l~~~l~~~ 194 (442)
|+|+++++.++. .++++||+|++++|+|+.|...++. .|.+ +++++++++++|.+|.+.
T Consensus 105 t~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~-~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~-------- 174 (409)
T PRK07590 105 SDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVM-AGRTGEANEDGRYSGIVYLPCTAENNFVPELPE-------- 174 (409)
T ss_pred CCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHH-cCCcccccccccccceeEeecccccCCcccCcc--------
Confidence 999999999875 4568999999999999999999985 8986 899999876677766432
Q ss_pred HhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEe
Q 046900 195 ESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVY 274 (442)
Q Consensus 195 ~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~ 274 (442)
.++|++++||||||||.++|.+++++|+++|++|+++||+||+|.++.+++..+.++.++... .+++|+++
T Consensus 175 ----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~-----~~~vi~~~ 245 (409)
T PRK07590 175 ----EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGA-----RECAIEFR 245 (409)
T ss_pred ----cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCc-----ccceEEEe
Confidence 278999999999999999999999999999999999999999999988866544556555321 35799999
Q ss_pred cCcccCCCCCceeEEEeecCHHHHH------------HHHH-cc-ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q 046900 275 SLSKDLGLPGFRVGTIYSYNDKVVT------------TARR-MS-SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQ 340 (442)
Q Consensus 275 S~SK~~g~~G~RiG~i~~~~~~~~~------------~~~~-~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 340 (442)
||||.||+||+|+||++++++ +.+ .+.. .. ....++.++|.++..++.+.. .+|+++.++.++
T Consensus 246 SfSK~~~~pGlRiG~~i~~~~-li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~~~~ 322 (409)
T PRK07590 246 SFSKTAGFTGTRCAYTVVPKE-LKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG--KAQIKELIDYYM 322 (409)
T ss_pred cCccccCCcCceeEEEEcCHH-HhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc--HHHHHHHHHHHH
Confidence 999999999999999999544 443 1111 12 224578899999998887543 467888999999
Q ss_pred HHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCH
Q 046900 341 KRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSE 420 (442)
Q Consensus 341 ~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~ 420 (442)
++++.+.+.|++.|+++..+.+|+|+|++++... ++.+++..+++++||.+.||+.|+....+++||++.. ++
T Consensus 323 ~~r~~l~~~L~~~~~~~~~~~g~~f~wi~~~~~~------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~ 395 (409)
T PRK07590 323 ENAKIIREGLESAGFEVYGGVNAPYIWVKTPDGM------SSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFG-SR 395 (409)
T ss_pred HHHHHHHHHHHhcCCceecCCcceEEEEECCCCC------CHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccC-CH
Confidence 9999999999998988888899999999998643 2567888888877999999999976556899999866 78
Q ss_pred HHHHHHHHHHHHHH
Q 046900 421 QTLEVALKRIHNFM 434 (442)
Q Consensus 421 e~i~~~l~~l~~~l 434 (442)
+++++++++|++++
T Consensus 396 ~~l~~~l~rl~~~~ 409 (409)
T PRK07590 396 ENVLEAMERIKKAL 409 (409)
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999998753
No 30
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-52 Score=412.97 Aligned_cols=358 Identities=21% Similarity=0.310 Sum_probs=291.8
Q ss_pred CCCCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCc-cCCC-
Q 046900 45 TNPSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK-FDLN- 121 (442)
Q Consensus 45 ~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~~- 121 (442)
..+.++|+|++++++++ ++.+.+.+.+.... .....|++ .|.++||+++|+|+++.+| +. ++++
T Consensus 41 ~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~----------~~~~~Y~~-~G~~~lr~aia~~~~~~~g--~~~~~~~~ 107 (410)
T PRK06290 41 HPDMELIDMGVGEPDEMADESVVEVLCEEAKK----------PENRGYAD-NGIQEFKEAAARYMEKVFG--VKDIDPVT 107 (410)
T ss_pred cCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhC----------CCCCCCCC-CCcHHHHHHHHHHHHHHcC--CCcCCCcc
Confidence 34557899999998874 34455444432111 12346875 7999999999999998766 44 7786
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
+|++|+|+++++..++.+++++||.|+++.|+|+.|...++. .|++++.+|++++++|.+|++.+++.+.+ ++
T Consensus 108 ~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~-~g~~v~~v~~~~~~~~~~d~~~l~~~~~~------~~ 180 (410)
T PRK06290 108 EVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKY-YGGEVYNLPLLEENNFLPDLDSIPKDIKE------KA 180 (410)
T ss_pred eEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHH-cCCEEEEEecCCCcCCcCCHHHHHHhhcc------cc
Confidence 799999999999999999999999999999999999999985 99999999999877899999999988764 78
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
++|+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++ .+.++.++.. ..+++|+++||||.||
T Consensus 181 k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~-~~~s~~~~~~-----~~~~~I~i~SfSK~~g 254 (410)
T PRK06290 181 KLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDG-KPLSFLSVPG-----AKEVGVEIHSLSKAYN 254 (410)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCC-CCcChhcCCC-----ccccEEEEeechhhcC
Confidence 999999999999999999999999999999999999999999988865 3445555432 1367899999999999
Q ss_pred CCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 046900 282 LPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK 359 (442)
Q Consensus 282 ~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 359 (442)
+||+|+||+++ ++.+.+.+...... .+.+.++|.++..++++.. ++++.++.++++++.+.+.|++.|+.+.+
T Consensus 255 ~~GlRiG~ii~-~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 329 (410)
T PRK06290 255 MTGWRLAFVVG-NELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPE----ITEKIREKYSRRLDKLVKILNEVGFKAEM 329 (410)
T ss_pred CchhheEeEEe-CHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcH----HHHHHHHHHHHHHHHHHHHHHhCCCeecC
Confidence 99999999998 56666666654443 3445689999999998754 46778899999999999999999999888
Q ss_pred CCceEEEEEecCCccc-ccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec--CCHHHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLE-EQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN--MSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~--~~~e~i~~~l~~l~~~l~~ 436 (442)
|+||||+|++++.... .....++.++++.|+++.+|.+.||+.|+ +|+||+++. .++++.+++++.|.+.+.+
T Consensus 330 p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~----~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 330 PGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG----HFLRFSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred CCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcccc----CeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence 9999999999986421 00112467899999998788888988763 699999982 2678899999999988765
Q ss_pred H
Q 046900 437 R 437 (442)
Q Consensus 437 ~ 437 (442)
.
T Consensus 406 ~ 406 (410)
T PRK06290 406 V 406 (410)
T ss_pred c
Confidence 3
No 31
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-52 Score=415.26 Aligned_cols=357 Identities=25% Similarity=0.405 Sum_probs=300.9
Q ss_pred Cceeeeecccc---cccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 48 SGVIQMGLAEN---QVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 48 ~~~i~l~~~~n---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
+.+|+|+.+.+ .++.+.+++.+......... .....|.+..|.++||++|++|+...+| +.+++++|+
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~-------~~~~~y~~~~G~~~LR~~ia~~l~~~~g--~~~~~~~Ii 159 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGA-------SLALQYGPTAGLPELREAIAAYLLARRG--ISCEPEQIV 159 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcch-------hhhhcCCCCCCcHHHHHHHHHHHHHhcC--CccCcCeEE
Confidence 56788887653 24556666655544321100 1146788889999999999999997666 778999999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|++++++++++.+++|||+|++++|+|.....+++. .|+++++||+|++| +|+|.|++.++++ ++|++
T Consensus 160 iT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~-~g~~~~~vp~d~~G---~~~e~le~~~~~~-----~~k~~ 230 (459)
T COG1167 160 ITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEA-LGARVIPVPVDEDG---IDPEALEEALAQW-----KPKAV 230 (459)
T ss_pred EeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHH-cCCcEEecCCCCCC---CCHHHHHHHHhhc-----CCcEE
Confidence 999999999999999999999999999999999999995 99999999999765 9999999999864 67766
Q ss_pred EEe-CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 205 LIT-NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 205 ~l~-~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
+++ +-+||||.+||.+++++|+++|++|+++||+||+|+++.|++.+..++..++. .++||+++||||++. |
T Consensus 231 y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~------~~rViy~gSFSK~l~-P 303 (459)
T COG1167 231 YVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDA------PGRVIYLGSFSKTLA-P 303 (459)
T ss_pred EECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCC------CCCEEEEeeehhhcc-c
Confidence 554 33799999999999999999999999999999999999999877777888866 489999999999996 9
Q ss_pred CceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC---CCeee
Q 046900 284 GFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA---GIECL 358 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~ 358 (442)
|+|+||+++| +.+.+.+.. ......++.+.|.+++.++.++.+ ++|++++++.|+++++.+.+.|.++ ++.+.
T Consensus 304 glRlG~vv~p-~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~-~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~ 381 (459)
T COG1167 304 GLRLGYVVAP-PELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHY-DRHLRRLRREYARRRDALLEALAEYLPELATWT 381 (459)
T ss_pred ccceeeeeCC-HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeee
Confidence 9999999995 454444433 333467889999999999996654 9999999999999999999999987 46788
Q ss_pred cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeC-CCCCCCCC--CCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 359 KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISP-GSSCHCSE--PGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 359 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~p-g~~f~~~~--~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
.|.+|||+|+++++..+ +.++...++++ ||.+.| |..|.... .+++||+|+..+++++++++++|.+++.
T Consensus 382 ~p~gG~flwl~l~~~~~------~~~l~~~a~~~-gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~ 454 (459)
T COG1167 382 RPEGGLFLWLELPEGID------ARELLAAALEK-GVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLR 454 (459)
T ss_pred cCCceEEEEEEcCCCCC------HHHHHHHHHHC-CCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 89999999999998754 67888888777 999998 88887643 3589999998789999999999999998
Q ss_pred HHH
Q 046900 436 KRE 438 (442)
Q Consensus 436 ~~~ 438 (442)
++.
T Consensus 455 ~~~ 457 (459)
T COG1167 455 EAA 457 (459)
T ss_pred HHh
Confidence 764
No 32
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=6.1e-52 Score=407.82 Aligned_cols=350 Identities=23% Similarity=0.376 Sum_probs=292.4
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|+|+.++++++ ++.+.+.+.+.... ....|++..|.+++|+++|+|+++.+| +.+++++|++|
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-----------~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~it 98 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAA-----------GHTRYTAARGLPALREAIAGFYAQRYG--VDVDPERILVT 98 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhc-----------CCCccCCCCCCHHHHHHHHHHHHHHhC--CCCChhhEEEc
Confidence 46799999998864 45555555543211 124688888999999999999998876 55789999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++..++.+++++||.|++++|+|+.+...+.. .|.+++.++++.+++|.+|++.+++.+++ +++++++
T Consensus 99 ~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i~i 171 (387)
T PRK08960 99 PGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRL-VEGAAQLVPVGPDSRYQLTPALVERHWNA------DTVGALV 171 (387)
T ss_pred cCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh-cCCeEEEEecCcccCCCCCHHHHHHHhCc------cceEEEE
Confidence 9999999999999999999999999999999998885 89999999998777899999999998765 6788999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
++||||||.+++.+++++|+++|++++++||+||+|.++.+++. ..++... .+++++++||||.||++|+|
T Consensus 172 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~--------~~~vi~~~S~SK~~g~~GlR 242 (387)
T PRK08960 172 ASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV--------DDDAFVLNSFSKYFGMTGWR 242 (387)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc--------cCCEEEEeecccccCCcccE
Confidence 99999999999999999999999999999999999999888643 3444332 36899999999999999999
Q ss_pred eEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCee-ecCCce
Q 046900 287 VGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIEC-LKGNAG 363 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~g 363 (442)
+||++++ +.+.+.+.+.... ..++.+.|.++.+++.+. . .+++++.++.++++++.+.+.|++.|+.+ ..|.+|
T Consensus 243 iG~~~~~-~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~ 319 (387)
T PRK08960 243 LGWLVAP-PAAVPELEKLAQNLYISASTPAQHAALACFEPE-T-LAILEARRAEFARRRDFLLPALRELGFGIAVEPQGA 319 (387)
T ss_pred EEEEEcC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcC-c-HHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCee
Confidence 9999995 5566666554432 456889999999888753 2 56788899999999999999999888765 468899
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC-CCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS-EPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~-~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|+|++++.... ++.+++..+++++||.|.||+.|+.. ..+|+||+++. +.+.+++++++|++++.
T Consensus 320 ~f~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 320 FYLYADISAFGG-----DAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-SLPRLQEAVERIARGLR 386 (387)
T ss_pred EEEEEeccccCC-----CHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 999999986311 25688888887779999999999753 34799999998 78999999999998765
No 33
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-52 Score=410.44 Aligned_cols=354 Identities=21% Similarity=0.389 Sum_probs=298.5
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|+|+.+++.++ ++.+.+.+.+.... ....|.+..|.++||+++|+++++.+| ..+++++|++|
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~t 99 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDE-----------GWTHYTPNAGIPELREAIAEYYKKFYG--VDVDVDNVIVT 99 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCcccEEEe
Confidence 46899999998874 35555555543211 234688888999999999999988766 45789999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++.+++.+++++||.|++++|+|..+...+.. .|++++.+|++.+++|.+|++.+++.+.+ +++++++
T Consensus 100 ~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~~~v~i 172 (391)
T PRK08361 100 AGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKI-AEAKPIRIPLREENEFQPDPDELLELITK------RTRMIVI 172 (391)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHH-cCCEEEEEecCCccCCCCCHHHHHHhccc------ccEEEEE
Confidence 9999999999999999999999999999999998885 89999999998877889999999998875 7889999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
+||+||||.+++.+++++|+++|++++++||+||+|+++.+++....++.+.. .+++++++||||.||++|+|
T Consensus 173 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-------~~~~i~~~s~SK~~~~~GlR 245 (391)
T PRK08361 173 NYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-------PDNTILANSFSKTFAMTGWR 245 (391)
T ss_pred eCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-------CCCEEEEecCchhcCCcHhh
Confidence 99999999999999999999999999999999999999888655555555442 36899999999999999999
Q ss_pred eEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCce
Q 046900 287 VGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAG 363 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g 363 (442)
+||++++ +.+.+.+..... .+.++.+.|.++..++.+..+ .+++++.++.++++++.+.+.|++. |+.+..|++|
T Consensus 246 iG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~ 323 (391)
T PRK08361 246 LGFVIAP-EQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKES-WKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGA 323 (391)
T ss_pred hhhhccC-HHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcc-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEE
Confidence 9999995 455555544332 356788999999999987654 3578889999999999999999987 8888899999
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
+|+|++++.... ++.++++.|++++||.|.||+.|+..+++++||+++. +++++++++++|++++++
T Consensus 324 ~~~~~~l~~~~~-----~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 324 FYVFANIDETGM-----SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEE 390 (391)
T ss_pred EEEEEECCCCCC-----CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 999999974211 2567888888777999999999976667899999997 788999999999998864
No 34
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.4e-51 Score=405.40 Aligned_cols=357 Identities=26% Similarity=0.472 Sum_probs=295.0
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC-CcEEE
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRIVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i~~ 125 (442)
.++|+|+.+.++++ ++.+.+.+.+.... ....|++..|.++||+++++|+++.++ +.+++ ++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~~i~i 96 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDA-----------NQSHYTGMAGLLELRQAAADFVKEKYN--LDYAPENEILV 96 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEEE
Confidence 46899999998764 35555555543211 124698889999999999999998776 44554 78999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++.+++++||.|++++|+|+.+...++. .|++++.+++++ .+|.+|++.+++++++. ..++++++
T Consensus 97 t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~---~~~~~~i~ 171 (391)
T PRK07309 97 TIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNL-VGAEIVEIDTTE-NDFVLTPEMLEKAILEQ---GDKLKAVI 171 (391)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHH-cCCEEEEEecCC-cCCcCCHHHHHHHhhcc---CCCeEEEE
Confidence 99999999999999999999999999999999998885 899999999864 45789999999988642 22688999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.+++++|+++|++|+++||+||+|+++.+++..+.++.++. .+++++++||||.||+||+
T Consensus 172 l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-------~~~~i~~~S~SK~~g~~Gl 244 (391)
T PRK07309 172 LNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-------PDQTILINGLSKSHAMTGW 244 (391)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-------cCCEEEEecChhhccCccc
Confidence 999999999999999999999999999999999999999998765556666553 3689999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||++++ +.+.+.+..... ...++.++|.++..++++..+ +....++.++++++++.+.|++.|+.+..|++|
T Consensus 245 RvG~~v~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg 320 (391)
T PRK07309 245 RIGLIFAP-AEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKD---DALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGA 320 (391)
T ss_pred eeEEEEeC-HHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChh---HHHHHHHHHHHHHHHHHHHHHHCCCeecCCCee
Confidence 99999995 555555544332 245788899999999987543 234677889999999999999989999999999
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
+|+|++++.... .++.++++.+++++||.+.||+.|+...+++|||+++. +.+++++++++|+++++++.
T Consensus 321 ~~~~~~l~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 321 FYIFAKIPAGYN----QDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYMEEHA 390 (391)
T ss_pred EEEEEECCCCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhhc
Confidence 999999886421 12567888877777999999999986667899999997 78899999999999997764
No 35
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=3.6e-52 Score=408.59 Aligned_cols=349 Identities=20% Similarity=0.318 Sum_probs=287.0
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC-CcEEE
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRIVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i~~ 125 (442)
.++|+|+.++++++ ++.+.+.+.+.... ....|++..|.++||+++++++.+.+| ..+++ ++|++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----------~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~~i~i 95 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMRD-----------GHNQYAPMAGIAALREALAEKTERLYG--ARYDPASEVTV 95 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHHh-----------CCCCcCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEEE
Confidence 46899999998775 45555555543211 135699999999999999999998876 33455 68999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++++++++||+|+++.|+|..+...++. .|++++.+++++ ++|.+|++.|++.+++ ++++++
T Consensus 96 t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v~ 167 (384)
T PRK12414 96 IASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRL-QGATPVAIKLSP-EDFRVNWDEVAAAITP------RTRMII 167 (384)
T ss_pred ECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHH-cCCEEEEEecCc-cccccCHHHHHhhcCc------ccEEEE
Confidence 99999999999999999999999999999999998885 899999999875 3588999999998864 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++..+.++..+.. ..+++++++||||.||+||+
T Consensus 168 i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~-----~~~~~i~~~SfSK~~~~pGl 242 (384)
T PRK12414 168 VNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRE-----LAERSVIVSSFGKSYHVTGW 242 (384)
T ss_pred EcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcC-----ccCcEEEEecccccccCccc
Confidence 9999999999999999999999999999999999999999987654445544322 13689999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||++++ +.+.+.+.+... .+.++.+.|.++..++.++.+ ..+.++.|+++|+.+.+.|++.|+.+.+++||
T Consensus 243 RiG~~v~~-~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg 317 (384)
T PRK12414 243 RVGYCLAP-AELMDEIRKVHQFMVFSADTPMQHAFAEALAEPAS----YLGLGAFYQRKRDLLARELAGSRFELLPSEGS 317 (384)
T ss_pred eEEEEecC-HHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChH----HHHHHHHHHHHHHHHHHHHHhCCCeecCCCcc
Confidence 99999995 556666655442 356788999999999987653 23567889999999999999999988899999
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCC--CCEEEEEeecCCHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSE--PGWFRVCFANMSEQTLEVALKRIHN 432 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~--~~~iRls~~~~~~e~i~~~l~~l~~ 432 (442)
||+|++++..... .+.+++..+++++||.+.||+.|+..+ .+|+||+++. +++++++++++|.+
T Consensus 318 ~~~~~~~~~~~~~----~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~ 383 (384)
T PRK12414 318 FFMLARFRHFSDE----SDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS 383 (384)
T ss_pred eEEEEcccccCCC----CHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 9999998753211 245677666677799999999996432 5799999998 89999999999975
No 36
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-53 Score=393.63 Aligned_cols=354 Identities=19% Similarity=0.344 Sum_probs=296.8
Q ss_pred eeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHH
Q 046900 53 MGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATA 131 (442)
Q Consensus 53 l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ 131 (442)
|+.+.+..+ ++.+.+.+.+..... ...+|....|+++|+++|++.+...+|. .....++|+||+|+.+
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~----------~~~qYt~~~G~p~L~~aL~k~~se~~~~-~~~~~~eVlVT~GA~~ 104 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEP----------STNQYTRGYGLPQLRKALAKAYSEFYGG-LLDPDDEVLVTAGANE 104 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccc----------hhccccccCCchHHHHHHHHHHHHHhcc-ccCCcccEEEecCchH
Confidence 788876664 466666666654321 2467888889999999999999997763 3345567999999999
Q ss_pred HHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC------CCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 132 ANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD------SSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 132 ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~------~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
+|..++.+++++||.|++.+|.|+.|...++. .|...+.+++. ....|.+|++.++.++.+ ++|+|+
T Consensus 105 ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~m-aG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~------kTk~Ii 177 (420)
T KOG0257|consen 105 AISSALLGLLNPGDEVIVFEPFFDCYIPQVVM-AGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE------KTKAII 177 (420)
T ss_pred HHHHHHHHHcCCCCEEEEecCcchhhhhHHhh-cCCcceeeccccccccccCccccCChHHHHhhccC------CccEEE
Confidence 99999999999999999999999999999996 99999999988 456799999999999987 999999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+|+||||||.++|+++|++|+++|++||++||.||+|..++|++..+.++..+ ++ ++++++.++|+||+||++||
T Consensus 178 ~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~asl-Pg----m~ertitvgS~gKtf~~TGW 252 (420)
T KOG0257|consen 178 LNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASL-PG----MYERTITVGSFGKTFGVTGW 252 (420)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecC-Cc----hhheEEEeccccceeeeeee
Confidence 99999999999999999999999999999999999999999999878888777 54 58999999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhH-----HHHHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 046900 286 RVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFT-----ENYIKTNRERLQKRYQMIIEGLRSAGIECL 358 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 358 (442)
|+||+++ ++.+........+. ..++++.|.+.+..++.+... ..++.++.+.|+++|+.|.+.|.++|+++.
T Consensus 253 rlGW~ig-p~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~ 331 (420)
T KOG0257|consen 253 RLGWAIG-PKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVT 331 (420)
T ss_pred eeeeeec-hHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 9999999 66666666554433 678889999888877754310 135666899999999999999999999999
Q ss_pred cCCceEEEEEecCCcccc------cChhhHHHHHHHHHHcCcEEEeCCCCCCCCC-----CCEEEEEeecCCHHHHHHHH
Q 046900 359 KGNAGLFCWMNLSPLLEE------QTREGELALWDSMLHEVKLNISPGSSCHCSE-----PGWFRVCFANMSEQTLEVAL 427 (442)
Q Consensus 359 ~~~~g~~~~~~~~~~~~~------~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~-----~~~iRls~~~~~~e~i~~~l 427 (442)
.|+|++|+|++++..... ...-++..++..++++.|+.+.|++.|+... .+++|+++.. +++.++.++
T Consensus 332 ~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k-~~~~L~~a~ 410 (420)
T KOG0257|consen 332 GPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCK-ADETLRKAI 410 (420)
T ss_pred cCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHh-hHHHHHHHH
Confidence 999999999999821110 0111356788999999999999999998643 2578999987 788899999
Q ss_pred HHHH
Q 046900 428 KRIH 431 (442)
Q Consensus 428 ~~l~ 431 (442)
++|+
T Consensus 411 e~l~ 414 (420)
T KOG0257|consen 411 ERLK 414 (420)
T ss_pred HHHh
Confidence 9988
No 37
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=8.5e-52 Score=401.33 Aligned_cols=341 Identities=23% Similarity=0.372 Sum_probs=285.3
Q ss_pred eeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEEEec
Q 046900 50 VIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIVVTA 127 (442)
Q Consensus 50 ~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~t~ 127 (442)
+++|+.+.+.++ ++.+.+.+++... ....|+++.|.++||+++++|+++.+| ++++++ +|++|+
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~------------~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~Iiit~ 67 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVP------------EVSQYPSALGTKALREAISGWFERRFG--VKLDPDAQVLPSA 67 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHh------------ccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEEEcC
Confidence 578888877665 4556666655421 245799999999999999999998877 567887 999999
Q ss_pred ChHHHHHHHHHhhcCCC---CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 128 GATAANELLTFILADPG---DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~g---d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
|+++++..++.+++++| |.|+++.|+|+.|...++. .|++++.++++.+++|++|++.+++++.+ +++++
T Consensus 68 Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i 140 (350)
T TIGR03537 68 GSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALF-AGGEPTAVKLKKEDGFLLRLEKVEKSILE------ETKIV 140 (350)
T ss_pred ChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHHh-cCCEEEEcccCcccCCccCHHHHHHhhhh------ccEEE
Confidence 99999999999999887 6999999999999999995 99999999998667899999999998875 78999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++||||||.+++.+++++|+++|++++++||+||+|+++.++. ...++.... .+++++++||||.+|++|
T Consensus 141 ~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-------~~~~i~~~s~SK~~g~~G 212 (350)
T TIGR03537 141 WINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVG-------IENVLAFHSLSKRSGMTG 212 (350)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcC-------cCCEEEEeecccccCCcc
Confidence 999999999999999999999999999999999999999987754 344444332 378999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccccC--CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSFT--LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||+++ ++.+.+.++.....+ ..+.+.|.++...+.... ++++.++.++++++.+.+.|++.|+++.+|++
T Consensus 213 lRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g 287 (350)
T TIGR03537 213 YRSGFVAG-DEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDN----HVLERRKIFKRKRDLFIEFFNKVGLEYLYPDA 287 (350)
T ss_pred ccceeeec-CHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcH----HHHHHHHHHHHHHHHHHHHHHHCCCcccCCCe
Confidence 99999998 566666666544332 334467888777776533 46778899999999999999999998889999
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHN 432 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~ 432 (442)
|+|+|++++... ++.++++.|+++ ||.|.||..|+...++++||+++. +++++++++++|++
T Consensus 288 ~~~~~~~~~~~~------~~~~l~~~L~~~-gv~v~~g~~f~~~~~~~~Ri~~~~-~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 288 TFYLWVKVPSGI------DAKDYALRLLEN-GIVVAPGENFGSGEEGYVRVALVP-TLEECEEALRLWER 349 (350)
T ss_pred EEEEEEECCCCC------CHHHHHHHHHHC-CEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHhc
Confidence 999999998643 257888998876 999999999976556899999985 88999999999875
No 38
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.5e-52 Score=408.41 Aligned_cols=360 Identities=22% Similarity=0.371 Sum_probs=299.4
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.+.+.++ ++.+.+.+.+.... ...+|+++.|.++||+++++++.+.+| ..+++++|++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----------~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~i~~ 98 (402)
T PRK06107 32 GRSIVDLTVGEPDFDTPDHIKQAAVAAIER-----------GETKYTLVNGTPALRKAIIAKLERRNG--LHYADNEITV 98 (402)
T ss_pred cCCEEEcCCCCCCCCCCHHHHHHHHHHHHc-----------CCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEEE
Confidence 347899999988765 35555555544321 235799999999999999999998766 4568899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++.+++++||+|++++|+|..|...+.. .|..++.++++.+++|.+|++.+++.+.+ ++++++
T Consensus 99 t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v~ 171 (402)
T PRK06107 99 GGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLA-NDGTPVIVACPEEQGFKLTPEALEAAITP------RTRWLI 171 (402)
T ss_pred eCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHH-cCCEEEEecCCcccCCCCCHHHHHhhcCc------CceEEE
Confidence 99999999999999999999999999999999888874 88888999887667789999999988754 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhc-CcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRK-NIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~-~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++||+||||.++|.+++++|+++|+++ +++||+||+|+++.|++..+.++.++.++ ..+++++++||||.||+||
T Consensus 172 l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~----~~~~vi~~~S~SK~~~~pG 247 (402)
T PRK06107 172 LNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPE----LRDRVLVTNGVSKTYAMTG 247 (402)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcC----ccCCEEEEeccchhhcCcc
Confidence 999999999999999999999999998 99999999999998877666677666442 2468999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC
Q 046900 285 FRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGN 361 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 361 (442)
+|+||+++ ++.+.+.+..... .+.++.++|.++..++.+. .+++++.++.++++++.+.+.|++. |+.+.+|+
T Consensus 248 lRiG~~~~-~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~ 323 (402)
T PRK06107 248 WRIGYAAG-PADLIAAINKLQSQSSSCPSSISQAAAAAALNGD---QSFVTESVAVYKQRRDYALALLNAIPGLSCLVPD 323 (402)
T ss_pred cceeeeec-CHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCC---hHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCC
Confidence 99999999 4566666665443 3568899999999999753 3578888999999999999999887 88888999
Q ss_pred ceEEEEEecCCcccc-----cChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 362 AGLFCWMNLSPLLEE-----QTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 362 ~g~~~~~~~~~~~~~-----~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
+|+|+|++++...+. ....+..+++..+++++||.+.||+.|+. .+|+||+++. +++++++++++|++++++
T Consensus 324 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~--~~~iRis~~~-~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 324 GAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL--SPYFRLSIAT-SLETLEEACARIERAVAA 400 (402)
T ss_pred cceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCC-CHHHHHHHHHHHHHHHHh
Confidence 999999998542110 00113567888888878999999999963 5799999997 899999999999999876
Q ss_pred H
Q 046900 437 R 437 (442)
Q Consensus 437 ~ 437 (442)
.
T Consensus 401 ~ 401 (402)
T PRK06107 401 L 401 (402)
T ss_pred c
Confidence 4
No 39
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-51 Score=376.32 Aligned_cols=356 Identities=22% Similarity=0.340 Sum_probs=310.7
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|.|.+++..++ ++.+.+.+++..+. ...+|+ .+..++.++|++|.+++++ ..++++.|++
T Consensus 24 ~~DvlPmWVADMDf~~pp~i~~Al~~rvdh-----------GvfGY~--~~~~~~~~ai~~w~~~r~~--~~i~~e~i~~ 88 (388)
T COG1168 24 NEDVLPMWVADMDFPTPPEIIEALRERVDH-----------GVFGYP--YGSDELYAAIAHWFKQRHQ--WEIKPEWIVF 88 (388)
T ss_pred CCCcceeeeecccCCCCHHHHHHHHHHHhc-----------CCCCCC--CCCHHHHHHHHHHHHHhcC--CCCCcceEEE
Confidence 368899999998774 36666666655432 234565 4668899999999999987 5578999999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC-CCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD-SSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+.|...++..++++|+++||.|++.+|.|++|...++. .|.+++..|+- +++.|.+|.++||+++.+ .++|++
T Consensus 89 ~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~-n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~-----~~vkl~ 162 (388)
T COG1168 89 VPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKL-NGRKVIENPLVEDDGRYEIDFDALEKAFVD-----ERVKLF 162 (388)
T ss_pred cCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHhh-cCcEEEeccccccCCcEEecHHHHHHHHhc-----CCccEE
Confidence 99999999999999999999999999999999999995 99999999987 556799999999999986 367999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++||||||||.+.+.++|.+|.++|.+||++||+||+|+++++.+..+.++.++.+. ..++++.+.|.||+|+++|
T Consensus 163 iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~----~a~~~it~~saSKtFNlaG 238 (388)
T COG1168 163 ILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSER----FADNSITLTSASKTFNLAG 238 (388)
T ss_pred EEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChh----hhcceEEEeeccccccchh
Confidence 999999999999999999999999999999999999999999999778888877664 2588999999999999999
Q ss_pred ceeEEEeecCHHHHHHH-HHc--cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeec
Q 046900 285 FRVGTIYSYNDKVVTTA-RRM--SSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA--GIECLK 359 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~-~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~ 359 (442)
+++++++.+++.+++.+ +++ ......|.++..+..++++.++ .|+.++++.++.+++++.+.|.+. ++++..
T Consensus 239 L~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~---~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~ 315 (388)
T COG1168 239 LKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGE---PWLDELLEYLKDNRDYVADFLNKHLPGVKVTE 315 (388)
T ss_pred hhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec
Confidence 99999999998885543 333 2346678888888888888654 589999999999999999999987 899999
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
|+|.|.+|+++..... ++.++.+.++++.+|.+.+|..||..+.|++|+++++ +.+.+++++++|+..+++
T Consensus 316 p~gTYL~WLD~r~l~l-----~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~~ 386 (388)
T COG1168 316 PQGTYLAWLDCRELGL-----DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALKK 386 (388)
T ss_pred CCCceeeeeeccccCC-----ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHhc
Confidence 9999999999998643 3578899999999999999999999889999999999 999999999999988765
No 40
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=2.3e-51 Score=405.58 Aligned_cols=357 Identities=21% Similarity=0.363 Sum_probs=292.6
Q ss_pred Cceeeeeccccc----c-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCc
Q 046900 48 SGVIQMGLAENQ----V-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNR 122 (442)
Q Consensus 48 ~~~i~l~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~ 122 (442)
.++|+|+.+++. + +.+.+.+.+.+.... .....|++..|..+||+++|+|+++. + ..+++++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~Y~~~~g~~~lr~aia~~~~~~-~--~~~~~~~ 97 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDS----------GKYNGYAPTVGALSAREAIASYYHNP-D--GPIEADD 97 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhc----------cCCCCCCCCCCCHHHHHHHHHHHhhc-C--CCCCHHH
Confidence 477999998763 3 445566555543221 12356988899999999999999863 3 3478999
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
|++|+|+++++.+++.+++++||.|++++|+|..+...++. .|++++.++++.+++|++|++.+++.+++ +++
T Consensus 98 i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~-~g~~v~~~~~~~~~~~~~d~~~l~~~~~~------~~~ 170 (401)
T TIGR01264 98 VVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAES-MGIEVKLYNLLPDKSWEIDLKQLESLIDE------KTA 170 (401)
T ss_pred EEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHH-cCCEEEEeecCCccCCCCCHHHHHHHhcc------Cce
Confidence 99999999999999999999999999999999999998884 99999999987766789999999988764 678
Q ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC
Q 046900 203 GVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL 282 (442)
Q Consensus 203 ~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 282 (442)
+++++|||||||.+++.+++++|+++|++++++||+||+|.++.|++..+.++.++.+ ..++|+++||||.|++
T Consensus 171 ~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~------~~~vi~~~SfSK~~~~ 244 (401)
T TIGR01264 171 ALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSS------TVPILSCGGLAKRWLV 244 (401)
T ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCC------CCcEEEEccCcccCCC
Confidence 9999999999999999999999999999999999999999999987755666666643 2469999999999999
Q ss_pred CCceeEEEeecCH-----HHHHHHHHccc-cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 046900 283 PGFRVGTIYSYND-----KVVTTARRMSS-FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GI 355 (442)
Q Consensus 283 ~G~RiG~i~~~~~-----~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 355 (442)
||+|+||++++++ .+.+.+..... .+.++++.|.++..++.+. .++++++.++.++++|+.+.+.|++. |+
T Consensus 245 ~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~l~~~~~~~~~~r~~l~~~L~~~~~~ 322 (401)
T TIGR01264 245 PGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILLRT--PQEYFDGTLSVLESNAMLCYGALAAVPGL 322 (401)
T ss_pred ccceEEEEEecCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999998642 23333444332 3567889999999999762 25678889999999999999999987 77
Q ss_pred eeecCCceEEEEEecCCc-ccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 356 ECLKGNAGLFCWMNLSPL-LEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 356 ~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
.+..|++|+|+|++++.. .. ...++.++++.+++++||.|.||+.|+ .++++||+++. +++++++++++|.+++
T Consensus 323 ~~~~p~~g~f~~~~~~~~~~~--~~~~~~~~~~~l~~~~gI~v~pg~~f~--~~~~iRis~~~-~~~~l~~~l~rl~~~~ 397 (401)
T TIGR01264 323 RPVMPSGAMYMMVGIEMEHFP--EFKNDVEFTERLVAEQSVFCLPGSCFE--YPGFFRVVLTV-PVVMMEEACSRIQEFC 397 (401)
T ss_pred cccCCCeeeEEEEEecccccC--CCCCHHHHHHHHHHhCCEEEeCchhcC--CCCeEEEEEcC-CHHHHHHHHHHHHHHH
Confidence 777899999999998642 00 001256788888876799999999985 36899999997 7899999999999998
Q ss_pred HHH
Q 046900 435 QKR 437 (442)
Q Consensus 435 ~~~ 437 (442)
+++
T Consensus 398 ~~~ 400 (401)
T TIGR01264 398 ERH 400 (401)
T ss_pred hcc
Confidence 753
No 41
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-51 Score=400.65 Aligned_cols=343 Identities=19% Similarity=0.271 Sum_probs=276.5
Q ss_pred CceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|+|+.++++++. +.+.+.+.+.. .....|+++.|.++||+++|+|+++++| +++++++|++|
T Consensus 24 ~~~i~l~~~~p~~~~~~~~~~a~~~~~------------~~~~~Y~~~~G~~~lr~aia~~l~~~~g--~~~~~~~I~it 89 (374)
T PRK05839 24 YKGLDLTIGEPQFETPKFIQDALKNNA------------HLLNKYPKSAGEESLREAQRGFFKRRFK--IELKENELIPT 89 (374)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHh------------hccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCcceEEEe
Confidence 478999999987743 55555555432 1246799999999999999999998877 55789999999
Q ss_pred cChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 127 AGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+++++..++.+++ .+||.|+++.|+|+.|...+.. .|+++++++++++++|.+|++..+ + + ++|++
T Consensus 90 ~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~-~g~~v~~v~~~~~~~~~~d~~~~~--~-~------~~k~v 159 (374)
T PRK05839 90 FGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIA-SRAKVLLMPLTKENDFTPSLNEKE--L-Q------EVDLV 159 (374)
T ss_pred cCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHh-cCCEEEEeecccccCCcCCcchhh--h-c------cccEE
Confidence 999999999988764 4789999999999999999984 999999999987778888765542 2 1 68899
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++|||||||.++|.+++++|+++|+++|++||+||+|.++.++. .+.++.......+....+++|+++||||.|++||
T Consensus 160 ~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G 238 (374)
T PRK05839 160 ILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPG 238 (374)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCcc
Confidence 999999999999999999999999999999999999999976543 3445443321000012479999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||+++ ++.+.+.+.+... .+.++.+.|.++..++.+. +++++.++.++++++.+.+.| ++. .|.+
T Consensus 239 lRiG~ii~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~l---~~~--~p~g 308 (374)
T PRK05839 239 LRSGFIAG-DASILKKYKAYRTYLGCASPLPLQKAAAVAWLDD----EHAEFFRNIYAKNLKLAREIL---GIT--IPPA 308 (374)
T ss_pred ceeEEEec-CHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccc----hHHHHHHHHHHHHHHHHHHhc---CCC--CCCe
Confidence 99999999 4666666655443 2456788899888777653 356778889999999888776 343 6889
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC--CCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS--EPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~--~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
|+|+|++++. ..+++.++++++||.|.||+.|+.. .++|+|||++. +++++++++++|+++++
T Consensus 309 g~fi~~~~~~---------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 309 TFYVWLPVDN---------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKALEIIKTYLE 373 (374)
T ss_pred eEEEEEeCCC---------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHhh
Confidence 9999999874 4678888887669999999988643 36899999987 79999999999999874
No 42
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-51 Score=402.78 Aligned_cols=352 Identities=23% Similarity=0.441 Sum_probs=295.3
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|+|+.++++++ ++.+.+.+.+.... ....|++..|.++||+++|+++.+.+| ..+++++|++|
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~Y~~~~G~~~lr~~la~~~~~~~~--~~~~~~~i~~t 90 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALAD-----------GETFYTHNLGIPELREALARYVSRLHG--VATPPERIAVT 90 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcCcceEEEe
Confidence 46899999999886 46666665554321 124599989999999999999998766 45789999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCC-CCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS-NNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
+|+++++..++.+++++||.|++++|+|+.+...++. .|++++.+|++.+ ++|.+|++.+++.+.+ ++++++
T Consensus 91 ~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~~i~ 163 (382)
T PRK06108 91 SSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKI-LGARVVCVPLDFGGGGWTLDLDRLLAAITP------RTRALF 163 (382)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHH-CCCEEEEeeCCCCCCCccCCHHHHHHhcCc------cceEEE
Confidence 9999999999999999999999999999999998885 8999999999753 4688999999988764 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC-CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS-SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~-~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++||||||.+++.+++++|+++|++++++||+||+|+++.++ +....++..+... .+++++++||||.||++|
T Consensus 164 l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~S~SK~~g~~G 238 (382)
T PRK06108 164 INSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEP-----DDRIIFVNSFSKNWAMTG 238 (382)
T ss_pred EECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCC-----cCCEEEEeechhhccCcc
Confidence 9999999999999999999999999999999999999999886 3344455544321 368999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC
Q 046900 285 FRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGN 361 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 361 (442)
+|+||++++ +.+.+.+..... ...++.+.|.++..++.+. .+++++.++.++++++.+.+.|++. |+++..|+
T Consensus 239 ~RiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 314 (382)
T PRK06108 239 WRLGWLVAP-PALGQVLEKLIEYNTSCVAQFVQRAAVAALDEG---EDFVAELVARLRRSRDHLVDALRALPGVEVAKPD 314 (382)
T ss_pred cceeeeeCC-HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCC
Confidence 999999994 556665554332 2456888999999999764 3467788899999999999999887 88888899
Q ss_pred ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 362 AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 362 ~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|+|+|++++... +..++++.|++++||.+.||+.|+...++++||+++. +++++++++++|+++++
T Consensus 315 ~g~~~~~~l~~~~------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 315 GAMYAFFRIPGVT------DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA 381 (382)
T ss_pred eeEEEEEeCCCCC------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 9999999997642 2568889888877999999999975557899999998 89999999999998874
No 43
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-51 Score=371.23 Aligned_cols=363 Identities=21% Similarity=0.354 Sum_probs=307.7
Q ss_pred Cceeeeecccccc-----cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCc
Q 046900 48 SGVIQMGLAENQV-----SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNR 122 (442)
Q Consensus 48 ~~~i~l~~~~n~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~ 122 (442)
..+|.++.+++.. +.+...+++.+.... .....|.+..|....|+++|+|+++... ..+++++
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~S----------gk~N~Yaps~G~~~AR~AVAeYl~~~l~--~kl~a~D 128 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRS----------GKGNGYAPSVGILPARRAVAEYLNRDLP--NKLTADD 128 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhc----------CCCCCcCCccccHHHHHHHHHHhhcCCC--CccCcCc
Confidence 3789999987643 113333333332211 2346899999999999999999887644 4588999
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
|++|+|+++||++++.+|.+||..||+|.|+|+.|...+. ..|.++.++++-++.+|.+|++.+|..+.+ +|.
T Consensus 129 V~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~-~~~lEVR~ydlLPe~~weIDL~~veal~DE------NT~ 201 (447)
T KOG0259|consen 129 VVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAI-YSGLEVRYYDLLPEKDWEIDLDGVEALADE------NTV 201 (447)
T ss_pred eEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhh-hcCceeEeecccCcccceechHHHHHhhcc------Cee
Confidence 9999999999999999999999999999999999998888 499999999998899999999999999876 999
Q ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC
Q 046900 203 GVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL 282 (442)
Q Consensus 203 ~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 282 (442)
+++++||+||+|.+|+.+.|++|++.|++++++||.||+|.+++|++.+|.++.++... -.||.++|.||.|=.
T Consensus 202 AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssi------VPVitlggisKrW~V 275 (447)
T KOG0259|consen 202 AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSI------VPVITLGGISKRWIV 275 (447)
T ss_pred EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhcccc------CceEeeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999988765 578999999999999
Q ss_pred CCceeEEEeecCH-------HHHHHHHHcccc-CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 046900 283 PGFRVGTIYSYND-------KVVTTARRMSSF-TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA- 353 (442)
Q Consensus 283 ~G~RiG~i~~~~~-------~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 353 (442)
||||+||++..++ .+.+.++++... ...+++.|.|+-.+|.... +++.......++.+.+...+.|.+.
T Consensus 276 PGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp--~efF~k~~~~lk~na~l~y~~Lk~IP 353 (447)
T KOG0259|consen 276 PGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTP--EEFFDKKLSFLKSNADLCYSRLKDIP 353 (447)
T ss_pred CCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhCh--HHHHHHHHHHHHhhHHHHHHHHhcCC
Confidence 9999999987432 233344444333 5668899999999998644 6778888999999999999999987
Q ss_pred CCe-eecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHH
Q 046900 354 GIE-CLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHN 432 (442)
Q Consensus 354 g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~ 432 (442)
++. ..+|+|.+|+|+++.-.. -..++++.+++.+|.++..+.+.||..|+. ++|+|++++. +.+.+++++.||++
T Consensus 354 ~l~cp~kPeg~mylmv~l~~s~-~~~~~dD~dFc~kL~~Eesv~~LPG~af~~--~nw~Ri~i~~-~~~~leea~~Rik~ 429 (447)
T KOG0259|consen 354 CLTCPVKPEGCMYLMVKLNLSL-FPDIEDDVDFCQKLAREESVICLPGQAFGL--KNWLRIVITV-EEEMLEEAFSRIKE 429 (447)
T ss_pred CcccCcCCCcceEEEeccchhh-hccccccHHHHHHHhhhcceEEeccccccC--CCeEEEEEcc-ChHHHHHHHHHHHH
Confidence 787 467999999999886431 123446889999999999999999999974 7999999998 88999999999999
Q ss_pred HHHHHHhhc
Q 046900 433 FMQKRERRR 441 (442)
Q Consensus 433 ~l~~~~~~~ 441 (442)
+..+|.+.+
T Consensus 430 Fc~RH~~~~ 438 (447)
T KOG0259|consen 430 FCDRHSKEQ 438 (447)
T ss_pred HHHhhhhcc
Confidence 999988544
No 44
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=5.7e-51 Score=400.51 Aligned_cols=354 Identities=26% Similarity=0.451 Sum_probs=293.4
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEEE
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~ 125 (442)
+++|+|+.+.+.++ ++.+.+.+.+.... ....|++..|.++||+++|+|+++.+| ++++++ +|++
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~-----------~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~~I~~ 94 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITE-----------NYTSYTHNAGLLELRKAACNFVKDKYD--LHYSPESEIIV 94 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEEE
Confidence 46799999987654 35555555544321 235798889999999999999998776 557888 9999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++.+++++||.|++++|+|+.+...++. .|++++.+++++ ++|.+|.+.+++.+.+ ++++++
T Consensus 95 t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~-~~~~~~~~~l~~~~~~------~~~~i~ 166 (387)
T PRK07683 95 TIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRL-CGAKPVFIDTRS-TGFRLTAEALENAITE------KTRCVV 166 (387)
T ss_pred eCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHH-cCCEEEEeecCc-ccCCCCHHHHHHhcCc------CceEEE
Confidence 99999999999999999999999999999999999885 999999999875 4688899999988764 778999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++||||||.+++.+++++|+++|+++|++||+||+|+++.+++. ..++.++.. .++++++++||||.||+||+
T Consensus 167 i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~-----~~~~vi~~~s~SK~~~~pGl 240 (387)
T PRK07683 167 LPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPE-----MREKTIVINGLSKSHSMTGW 240 (387)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccC-----CcCCeEEEeeccccccCccc
Confidence 999999999999999999999999999999999999999887653 445555422 24789999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||++++ +.+.+.+..... ...++++.|.++..++.++. .++++.++.++++++.+.+.|.+.|+.+..+++|
T Consensus 241 RiG~i~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 316 (387)
T PRK07683 241 RIGFLFAP-SYLAKHILKVHQYNVTCASSISQYAALEALTAGK---DDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGA 316 (387)
T ss_pred eeEEEEcC-HHHHHHHHHHHHhccCCCChHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCee
Confidence 99999995 555555543322 24467789999999997653 3577788999999999999999889888899999
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
+|+|+.++.... ++.+++..+++++||.+.||+.|+...++++||+++. +++++++++++|.+++++..
T Consensus 317 ~~~~~~~~~~~~-----~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~~l~~~l~~~~ 385 (387)
T PRK07683 317 FYLFPSIGHFTM-----SSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQQKA 385 (387)
T ss_pred EEEEEecccCCC-----CHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhhc
Confidence 999999875211 2567777777777999999999976557899999998 89999999999999987543
No 45
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=5.5e-51 Score=401.18 Aligned_cols=354 Identities=23% Similarity=0.376 Sum_probs=289.2
Q ss_pred Cceeeeeccccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEE
Q 046900 48 SGVIQMGLAENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIV 124 (442)
Q Consensus 48 ~~~i~l~~~~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~ 124 (442)
.++|+|+.+.++.+ .+.++...+... .....|+++.|.++||+++++++++.+| +.++++ +|+
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~~i~ 91 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALL------------DGSNQYPPMMGLPELRQAVAAHYARFQG--LDLDPETEVM 91 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCcccEE
Confidence 36799998876653 333333222211 1235799999999999999999998776 557888 999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++.+++.+++++||.|++++|+|+.+...++. .|++++.+++++ .+|.+|++.+++.+.. +++++
T Consensus 92 ~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~-~~~~~~~~~l~~~~~~------~~~~v 163 (387)
T PRK08912 92 VTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRR-AGGVPRLVRLEP-PHWRLPRAALAAAFSP------RTKAV 163 (387)
T ss_pred EeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHH-cCCEEEEEecCc-ccCcCCHHHHHHHhCc------cceEE
Confidence 999999999999999999999999999999999999985 999999999864 3578999999998764 78899
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++..+.++.++.. ..+++++++||||.||++|
T Consensus 164 ~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~~G 238 (387)
T PRK08912 164 LLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPG-----MRERTVKIGSAGKIFSLTG 238 (387)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCC-----ccCceEEEeechhhccCcC
Confidence 99999999999999999999999999999999999999999887655556554422 1368999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||++++ +.+.+.+...... +..++..|.++..++... .+++++.++.++++++.+.+.|++.|+++.+++|
T Consensus 239 lRiG~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g 314 (387)
T PRK08912 239 WKVGFVCAA-PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKP---DDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQG 314 (387)
T ss_pred ceeEEEecC-HHHHHHHHHHHhhccccCChHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc
Confidence 999999994 5566665544332 456677888888777532 3467788999999999999999999999889999
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC--CCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS--EPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~--~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
|+|+|++++.... ..++.++++.+++++||.+.||..|+.. ..+|+||+++. +++.+++++++|++++.+
T Consensus 315 ~~~l~~~l~~~~~---~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 315 TYFLTVDLAPLGL---AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARRR 386 (387)
T ss_pred ceEEEecccccCC---CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 9999999975210 0136788999887779999999999643 35899999998 789999999999988753
No 46
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.9e-51 Score=403.99 Aligned_cols=350 Identities=22% Similarity=0.330 Sum_probs=292.1
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEEE
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~ 125 (442)
.++|+|+.+.+.++ ++.+.+.+.+.... ....|++..|.++||+++++++.+.++ ...+++ +|++
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~Y~~~~G~~~lr~~~a~~l~~~~~--~~~~~~~~i~~ 96 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMAA-----------GHNQYPPMTGVAALREAIAAKTARLYG--RQYDADSEITV 96 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHc-----------CCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEEE
Confidence 46899999887764 34555555443211 135698889999999999999998776 445565 8999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++.+++++||+|++++|+|+.+...++. .|++++.++++++ +|.+|++.+++.+++ ++++++
T Consensus 97 t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~-~g~~~~~~~~~~~-~~~~d~~~l~~~~~~------~~~~v~ 168 (386)
T PRK09082 97 TAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIEL-AGGRAVRVALQPP-DFRVDWQRFAAAISP------RTRLII 168 (386)
T ss_pred eCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHH-cCCEEEEEecCcc-cccCCHHHHHHhcCc------cceEEE
Confidence 99999999999999999999999999999999999985 8999999999754 588999999998864 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.+++++|+++|++|++++|+||+|.++.|++..+.++.++... .+++++++||||.||++|+
T Consensus 169 l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~-----~~~~i~~~S~SK~~~~~G~ 243 (386)
T PRK09082 169 LNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPEL-----RERAFVVSSFGKTYHVTGW 243 (386)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCc-----cCcEEEEeechhhccchhh
Confidence 99999999999999999999999999999999999999999876556676665432 4789999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||++++ +.+.+.+++.. ..+.++.+.|.+++.++... .+++++.++.++++++++.+.|++.|+++.+++||
T Consensus 244 RiG~iv~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~ 319 (386)
T PRK09082 244 KVGYCVAP-AALSAEFRKVHQYNTFTVNTPAQLALADYLRAE---PEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGT 319 (386)
T ss_pred hhhhhhCC-HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCee
Confidence 99999995 56666665543 23567899999999998742 34677889999999999999999989999999999
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC--CCCCEEEEEeecCCHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC--SEPGWFRVCFANMSEQTLEVALKRIHN 432 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~--~~~~~iRls~~~~~~e~i~~~l~~l~~ 432 (442)
+|+|+++++..+ .++.++++.|++++||.+.||+.|+. ...+++||+++. +++.+++++++|++
T Consensus 320 ~~~~~~~~~~~~----~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~ 385 (386)
T PRK09082 320 YFQLVDYSAISD----LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ 385 (386)
T ss_pred EEEEEeccccCC----CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 999999975211 13678889888888999999998863 235799999998 89999999999975
No 47
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=6.8e-51 Score=400.68 Aligned_cols=354 Identities=25% Similarity=0.405 Sum_probs=289.6
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|+|+.+++.++ ++.+.+.+.+... .....|++..|.++||+++|+|+++.++ +.+++++|++
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~~ 95 (388)
T PRK07337 29 GRDIIHMGIGEPDFTAPEPVVEAAARALR-----------RGVTQYTSALGLAPLREAIAAWYARRFG--LDVAPERIVV 95 (388)
T ss_pred CCCEEEeCCcCCCCCCCHHHHHHHHHHHh-----------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCChHhEEE
Confidence 457899999988764 3445555544321 1235699889999999999999998776 4578999999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++.+++++||.|++++|+|+.+...++. .|++++.+|++.+++|.+|++++++.+.+ ++++++
T Consensus 96 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~ 168 (388)
T PRK07337 96 TAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAA-AEGRPVLVPSGPAERFQLTAADVEAAWGE------RTRGVL 168 (388)
T ss_pred ecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHH-cCCEEEEeecCCccCCcCCHHHHHhhcCc------cceEEE
Confidence 99999999999999999999999999999999988884 89999999998767789999999998764 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++||||||.+++.+++++|+++|+++++++|+||+|.++.+.+. +.+...+ .+++++++||||.||+||+
T Consensus 169 l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~--------~~~vi~~~S~SK~~~~~G~ 239 (388)
T PRK07337 169 LASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA-PVSALSL--------GDDVITINSFSKYFNMTGW 239 (388)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CcChhhc--------cCCEEEEEechhhcCCchh
Confidence 999999999999999999999999999999999999999887653 3343332 2678999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCee-ecCCc
Q 046900 286 RVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIEC-LKGNA 362 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~ 362 (442)
|+||++++ +.+.+.+...... ..++++.|.++..++.+..+ +++++.++.++++|+.+.+.|++.|+.+ ..|++
T Consensus 240 RiG~~~~~-~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~ 316 (388)
T PRK07337 240 RLGWLVVP-EALVGTFEKLAQNLFICASALAQHAALACFEPDTL--AIYERRRAEFKRRRDFIVPALESLGFKVPVMPDG 316 (388)
T ss_pred heeeeecC-HHHHHHHHHHHHHhccCCChHHHHHHHHHhccCch--HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCe
Confidence 99999995 5566655544332 45688999999998875432 3357789999999999999999888765 46899
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC-CCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS-EPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~-~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
|+|+|++++..... ...++.+++..+++++||.|.||+.|+.. ..+|+||+++. +++.+++++++|.+++
T Consensus 317 g~f~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 317 AFYVYADCRGVAHP-AAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVARLGKLF 387 (388)
T ss_pred eEEEEEecccccCC-CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence 99999999753100 00135678888887779999999999753 35899999998 8999999999998865
No 48
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-50 Score=398.35 Aligned_cols=355 Identities=21% Similarity=0.380 Sum_probs=291.6
Q ss_pred ceeeeecccccc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC-CCcEEEe
Q 046900 49 GVIQMGLAENQV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD-LNRIVVT 126 (442)
Q Consensus 49 ~~i~l~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~~~i~~t 126 (442)
++++|+.+++++ +++.+.+++.+.... .....|++..|.+++|+++++++.+.+| +.++ +++|++|
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~----------~~~~~Y~~~~G~~~lr~~~~~~l~~~~g--~~~~~~~~i~~t 95 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLAN----------PENHKYQAVQGIPPLLEAITQKLQQDNG--IELNNEQAIVVT 95 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhC----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCeEEEe
Confidence 578999999876 345566665543211 1235798899999999999999998776 4455 6789999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++..++.+++++||.|++++|+|..+...++. .|++++.++.+. +|.+|++++++.+++ ++|++++
T Consensus 96 ~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~klv~~ 166 (389)
T PRK05957 96 AGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITM-AGCQPILVPTDD--NYQLQPEAIEQAITP------KTRAIVT 166 (389)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHh-cCCEEEEeecCC--CCCcCHHHHHHhcCc------CceEEEE
Confidence 9999999999999999999999999999999888774 899999999863 578999999998864 7899999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
++||||||.++|.+++++|+++|+++|++||+||+|.++.|++....+...+.. ..+++|+++||||.||++|+|
T Consensus 167 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~~GlR 241 (389)
T PRK05957 167 ISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPG-----SGNHTISLYSLSKAYGFASWR 241 (389)
T ss_pred eCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCC-----ccCcEEEEecchhhccCccce
Confidence 999999999999999999999999999999999999999887544445444422 247899999999999999999
Q ss_pred eEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-C-CeeecCCc
Q 046900 287 VGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-G-IECLKGNA 362 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g-~~~~~~~~ 362 (442)
+||+++ ++.+.+.+...... ...+.+.|.++..+++++. .++++.++.++++|+.+.+.|++. + +.+.+++|
T Consensus 242 iG~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~g 317 (389)
T PRK05957 242 IGYMVI-PIHLLEAIKKIQDTILICPPVVSQYAALGALQVGK---SYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANG 317 (389)
T ss_pred eEEEec-CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCe
Confidence 999999 45666666654433 3456789999999997642 235566677899999999999876 4 36778999
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
|+|+|++++... ++.+++++|++++||.+.||+.|+...++|+||+++..+++++++++++|.+.++++.+
T Consensus 318 g~~~~~~~~~~~------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~ 388 (389)
T PRK05957 318 AFYCFLKVNTDL------NDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIVQ 388 (389)
T ss_pred eEEEEEeCCCCC------ChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhc
Confidence 999999997543 36789999987779999999999765567999999866899999999999999887643
No 49
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=2.2e-51 Score=409.12 Aligned_cols=340 Identities=20% Similarity=0.279 Sum_probs=279.8
Q ss_pred CceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
..+++|+.+.+..+. +.+.+.+.+.. .....|+++.|.++||+++++|+++..+ .+++|++|
T Consensus 85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~-----~~~~Iiit 147 (431)
T PRK15481 85 TPLHDLAGGNPDPQRLPDLSRYFARLS------------RTPRLYGDAPVSPELHAWAARWLRDDCP-----VAFEIDLT 147 (431)
T ss_pred chhhhhhcCCCChhHhHHHHHHHHHhh------------hhhhhcCCcCCCHHHHHHHHHHHhhccC-----CcCeEEEe
Confidence 356888887654432 44455444432 1235799999999999999999985321 35699999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++.+++.+++++||.|++++|+|+.|...++. .|++++.+|+++++ +|++.|++++++ ++|++++
T Consensus 148 ~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~-~g~~~~~v~~~~~g---~~~~~l~~~~~~------~~k~i~~ 217 (431)
T PRK15481 148 SGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRY-AGFSASPVSVDAEG---MQPEKLERALAQ------GARAVIL 217 (431)
T ss_pred cCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHH-cCCeEEeeccCCCC---CCHHHHHHHHhc------CCCEEEE
Confidence 9999999999999999999999999999999999995 99999999997543 789999998864 6788888
Q ss_pred e-CCCCCCCcCCCHHHHHHHHHHHHhc-CcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 207 T-NPSNPLGATIQRSVLEELLDFATRK-NIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 207 ~-~P~NPtG~~~~~~~l~~l~~~~~~~-~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+ |||||||.++|.+++++|+++|+++ +++||+||+|.++.+++ ..+.... ..+++++++||||.|| ||
T Consensus 218 ~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~--~~~~~~~-------~~~~vi~~~SfSK~~~-~G 287 (431)
T PRK15481 218 TPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSP--YHSVIPQ-------TTQRWALIRSVSKALG-PD 287 (431)
T ss_pred CCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCC--CCCCCcC-------CCCCEEEEeeeccccC-CC
Confidence 7 9999999999999999999999999 99999999999987643 2222111 1368999999999999 99
Q ss_pred ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||++++ +.+.+.+...... +.++.++|.++..+|+++++ .+|++++++.++++|+.+.+.|++.|+.+..|++
T Consensus 288 lRiG~~i~~-~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~g 365 (431)
T PRK15481 288 LRLAFVASD-SATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEY-QARLAQARLFYAQRRQKLARALQQYGIAIPSPGD 365 (431)
T ss_pred ceeEEEeCC-HHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccH-HHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Confidence 999999994 5566655543332 45789999999999998765 6788999999999999999999998888878999
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCC-CCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSE-PGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~-~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
|+|+|++++. +..++++.|.++ ||.+.||+.|+... .+++||+++..+++++++++++|++++.
T Consensus 366 g~f~~~~l~~--------~~~~~~~~l~~~-gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 366 GLNLWLPLDT--------DSQATALTLAKS-GWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred eEEEEEECCC--------CHHHHHHHHHHC-CcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 9999999975 246778887665 99999999996432 4689999997789999999999998864
No 50
>PRK07324 transaminase; Validated
Probab=100.00 E-value=5.7e-51 Score=398.15 Aligned_cols=358 Identities=22% Similarity=0.322 Sum_probs=293.6
Q ss_pred hhhhhhcCCCCCCCCCCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHH
Q 046900 32 GWKAYDENPYEESTNPSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQ 110 (442)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 110 (442)
.|-...+..-..+...+++++|+++++.++. +.+....+... ....+|++..|.++||++||++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~~~~ 77 (373)
T PRK07324 10 EWLNVYEKSATYDIAESCIDSLTLEELLALAGKNPEAFYQELG------------QKKLTYGWIEGSPEFKEAVASLYQN 77 (373)
T ss_pred HHHHHhhccCccccccCCCCCCcHHHHHhccCcchHHHHHHHh------------cCCccCCCCCCCHHHHHHHHHHhcC
Confidence 3433333333334456789999999875532 22322222221 1134799989999999999999852
Q ss_pred HhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHH
Q 046900 111 IRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAA 190 (442)
Q Consensus 111 ~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~ 190 (442)
+++++|++|+|+++++.+++.+++++||+|+++.|+|+.+...++. .|++++.+|++.+++|.+|++.+++.
T Consensus 78 -------~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~-~g~~v~~v~~~~~~~~~~d~~~l~~~ 149 (373)
T PRK07324 78 -------VKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPES-LGAEVDYWQLKEENGWLPDLDELRRL 149 (373)
T ss_pred -------CChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHH-cCCEEEEEecccccCCCCCHHHHHHh
Confidence 6789999999999999999999999999999999999999988884 99999999998877899999999887
Q ss_pred HHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcE
Q 046900 191 YKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERV 270 (442)
Q Consensus 191 l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~v 270 (442)
+++ ++|++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++. +.++.+. .+++
T Consensus 150 ~~~------~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~--------~~~~ 214 (373)
T PRK07324 150 VRP------NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL--------YEKG 214 (373)
T ss_pred CCC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc--------cCCE
Confidence 754 789999999999999999999999999999999999999999999887643 4455433 3678
Q ss_pred EEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHH
Q 046900 271 HIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIE 348 (442)
Q Consensus 271 i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 348 (442)
|+++||||.||++|+|+||+++ ++.+.+.+++.... ...+.++|.++..+++.. +++++++++.++++++.+.+
T Consensus 215 I~~~s~SK~~~~~G~RiG~i~~-~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~---~~~l~~~~~~~~~~~~~l~~ 290 (373)
T PRK07324 215 ISTNSMSKTYSLPGIRVGWIAA-NEEVIDILRKYRDYTMICAGVFDDMLASLALEHR---DAILERNRKIVRTNLAILDE 290 (373)
T ss_pred EEEecchhhcCCccceeEEEec-CHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 57777777665543 456778999888888742 55788889999999999999
Q ss_pred HHHhC-CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHH
Q 046900 349 GLRSA-GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVAL 427 (442)
Q Consensus 349 ~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l 427 (442)
.|.+. ++.+..|.+|+|+|+.++... +..+++++|++++||.|.||+.|+. ++|+||+++. +++.+++++
T Consensus 291 ~l~~~~~~~~~~p~gg~~~~i~~~~~~------~~~~~~~~ll~~~gv~v~pg~~F~~--~~~iRis~~~-~~~~l~~~l 361 (373)
T PRK07324 291 WVAKEPRVSYVKPKAVSTSFVKLDVDM------PSEDFCLKLLKETGVLLVPGNRFDL--EGHVRIGYCC-DTETLKKGL 361 (373)
T ss_pred HHhcCCCceEECCCceEEEEEEeCCCC------CHHHHHHHHHHhcCEEEECccccCC--CCeEEEEecC-CHHHHHHHH
Confidence 99876 788888999999898887532 3678899988878999999999963 5799999998 789999999
Q ss_pred HHHHHHHHHH
Q 046900 428 KRIHNFMQKR 437 (442)
Q Consensus 428 ~~l~~~l~~~ 437 (442)
++|+++++++
T Consensus 362 ~rl~~~l~~~ 371 (373)
T PRK07324 362 KKLSEFLREF 371 (373)
T ss_pred HHHHHHHHhc
Confidence 9999999875
No 51
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.9e-50 Score=399.31 Aligned_cols=360 Identities=23% Similarity=0.368 Sum_probs=282.9
Q ss_pred CCceeeeecccc-c--c-cHH-HHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 47 PSGVIQMGLAEN-Q--V-SFD-LLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 47 ~~~~i~l~~~~n-~--~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
+.++|+|+.+.+ + + +++ .++...+... ....|+++.|.++||+++|+|+.+... .+++++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~-------------~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~ 96 (404)
T PRK09265 32 GHKILKLNIGNPAPFGFEAPDEILRDVIRNLP-------------TAQGYSDSKGLFSARKAIMQYYQQKGI--PDVDVD 96 (404)
T ss_pred CCCeEEecCCCCCcCCCCCCHHHHHHHHHHhh-------------cCCCCCCCCCcHHHHHHHHHHHhccCC--CCCCcc
Confidence 347899998643 2 2 223 3333332221 235799999999999999999975422 357899
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
+|++|+|+++++.+++.+++++||+|++++|+|+.+...+.. .|++++.++++.+++|.+|++.+++.+.+ ++
T Consensus 97 ~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~ 169 (404)
T PRK09265 97 DIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSL-SGGKPVHYLCDEEAGWFPDLDDIRSKITP------RT 169 (404)
T ss_pred cEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHH-cCCEEEEEecccccCCCCCHHHHHHhccc------cc
Confidence 999999999999999999999999999999999999998884 89999999987666788999999998754 78
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+.. ..++++++||||.||
T Consensus 170 ~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~------~~~vi~~~S~SK~~~ 243 (404)
T PRK09265 170 KAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAP------DLLCVTFNGLSKAYR 243 (404)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCC------CceEEEEecchhhcc
Confidence 89999999999999999999999999999999999999999999887766667766543 257899999999999
Q ss_pred CCCceeEEEeec-CHH----HHHHHHHcc-ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 046900 282 LPGFRVGTIYSY-NDK----VVTTARRMS-SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-G 354 (442)
Q Consensus 282 ~~G~RiG~i~~~-~~~----~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 354 (442)
+||+|+||++++ ++. +.+.+.... ..+.++.++|.++..+|.+.++..++++. ++.+.++|+.+.+.|+++ |
T Consensus 244 ~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~r~~~~~~L~~~~~ 322 (404)
T PRK09265 244 VAGFRVGWMVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILP-GGRLYEQRDRAWELLNAIPG 322 (404)
T ss_pred CcccceEEEEEeCchHHHHHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHH-HHHHHHHHHHHHHHHhcCCC
Confidence 999999999963 332 233333222 22567889999999999765443333333 356778899999999887 8
Q ss_pred CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 355 IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 355 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+++..|++|+|+|++++.... ...+..+++..+++++||.+.||+.|+...++|+||+++. +++++++++++|++++
T Consensus 323 ~~~~~p~~g~~l~~~~~~~~~--~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~-~~e~l~~~l~rl~~~l 399 (404)
T PRK09265 323 VSCVKPKGALYAFPKLDPKVY--PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLP-RVDDLEEAIGRIGRFL 399 (404)
T ss_pred CcccCCCcceEEEEEeccccc--CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHHHHH
Confidence 888889999999999875311 0011334444555666999999999975567899999976 8999999999999998
Q ss_pred HHHH
Q 046900 435 QKRE 438 (442)
Q Consensus 435 ~~~~ 438 (442)
+++.
T Consensus 400 ~~~~ 403 (404)
T PRK09265 400 SGYR 403 (404)
T ss_pred HHhc
Confidence 8654
No 52
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=2.1e-50 Score=398.60 Aligned_cols=360 Identities=23% Similarity=0.381 Sum_probs=293.8
Q ss_pred CCceeeeeccccc-----ccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 47 PSGVIQMGLAENQ-----VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 47 ~~~~i~l~~~~n~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
..++|+|+.+.+. .+.+.+.+.+.+.... .....|++..|..++|+++++|++..++ +.++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~ 97 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRS----------GKFNGYAPSVGALAAREAVAEYLSSDLP--GKLTAD 97 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhc----------CCCCCCCCCCCCHHHHHHHHHHHHhhcC--CCCCHH
Confidence 4678999998763 2345555555443211 1124688889999999999999997655 456789
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
+|++|+|+++++.+++.+++++||+|+++.|+|+.+...+.. .|++++.++++.+++|.+|++.+++.+.+ ++
T Consensus 98 ~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 170 (403)
T TIGR01265 98 DVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAF-SGLEVRLYDLLPEKDWEIDLDGLEALADE------KT 170 (403)
T ss_pred HEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHH-cCCEEEEecCCcccCCccCHHHHHHHhCc------Cc
Confidence 999999999999999999999999999999999999888884 89999999987666788999999988764 67
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
+++++++||||||.+++.+++++|+++|+++|++||+||+|+++.+++..+.++.++.. ..++|+++||||.|+
T Consensus 171 ~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~------~~~vi~~~S~SK~~~ 244 (403)
T TIGR01265 171 VAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFAS------IVPVLSLGGISKRWV 244 (403)
T ss_pred cEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhcc------CCcEEEEeecccccC
Confidence 89999999999999999999999999999999999999999999987766667776654 257999999999999
Q ss_pred CCCceeEEEeecCH--H----HHHHHHHccc-cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 046900 282 LPGFRVGTIYSYND--K----VVTTARRMSS-FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA- 353 (442)
Q Consensus 282 ~~G~RiG~i~~~~~--~----~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 353 (442)
+||+|+||++++++ . +.+.+..... .+.++.++|.++.+++.+.. ..++++.++.++++++.+.+.|+..
T Consensus 245 ~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~ 322 (403)
T TIGR01265 245 VPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILENTP--QEFFDGKISVLKSNAELCYEELKDIP 322 (403)
T ss_pred CCcceEEEEEEeCchhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999998532 1 3333333332 35678899999999997632 5678889999999999999999887
Q ss_pred CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 354 GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 354 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
|+.+..|.+|+|+|++++.... .+..++.+++..+++++||.|.||+.|+ .++|+||+++. +++.+++++++|+++
T Consensus 323 ~~~~~~p~~g~f~~~~~~~~~~-~~~~~~~~~~~~l~~~~gv~v~pg~~f~--~~~~iRis~~~-~~~~l~~~l~~l~~~ 398 (403)
T TIGR01265 323 GLVCPKPEGAMYLMVKLELELF-PEIKDDVDFCEKLVREESVICLPGSAFG--LPNWVRITITV-PESMLEEACSRIKEF 398 (403)
T ss_pred CceecCCCceeEEEEecccccc-CCCCCHHHHHHHHHHhCCEEEeCccccC--CCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 7877789999999999975310 0011356888888777799999999996 36899999997 788999999999999
Q ss_pred HHHH
Q 046900 434 MQKR 437 (442)
Q Consensus 434 l~~~ 437 (442)
++++
T Consensus 399 ~~~~ 402 (403)
T TIGR01265 399 CERH 402 (403)
T ss_pred HHhc
Confidence 8664
No 53
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=6.1e-50 Score=394.47 Aligned_cols=357 Identities=19% Similarity=0.326 Sum_probs=290.1
Q ss_pred CCceeeeeccccccc-HH-HHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cE
Q 046900 47 PSGVIQMGLAENQVS-FD-LLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RI 123 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i 123 (442)
+.++|+|+.+.+... ++ ......+.... .....|+++.|.++||+++++|+++++| +.++++ +|
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~i 94 (395)
T PRK08175 28 GEDIIDFSMGNPDGPTPPHIVEKLCEVAQR-----------PDTHGYSTSRGIPRLRRAISRWYQDRYD--VDIDPESEA 94 (395)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhC-----------CCcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcE
Confidence 457789998765432 22 33333332211 1246799999999999999999998776 557777 79
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
++|+|+++++..++..++++||+|++++|+|+.+...+.. .|++++.++++++++ +.+.++++++.. ..++++
T Consensus 95 ~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~-~g~~~~~v~~~~~~~---~~~~l~~~l~~~---~~~~~~ 167 (395)
T PRK08175 95 IVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVI-AGAQVRSVPLVEGVD---FFNELERAIRES---YPKPKM 167 (395)
T ss_pred EEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHH-cCCeEEEEecccCCC---cHHHHHHHHhhc---cCCceE
Confidence 9999999999999999999999999999999999888884 899999999986553 368888877642 236889
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
+++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++....++.++.. ..+++++++||||.||+|
T Consensus 168 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~p 242 (395)
T PRK08175 168 MILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPG-----AKDVAVEFFTLSKSYNMA 242 (395)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCC-----cccCEEEEeeccccccCc
Confidence 999999999999999999999999999999999999999999887655556655432 136788999999999999
Q ss_pred CceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC
Q 046900 284 GFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN 361 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 361 (442)
|+|+||+++ ++.+.+.+.+... .+.++++.|.++..++... +++++++++.++++++++.+.|++.|+.+..|.
T Consensus 243 GlRiG~~~~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~ 318 (395)
T PRK08175 243 GWRIGFMVG-NPELVSALARIKSYHDYGTFTPLQVAAIAALEGD---QQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPK 318 (395)
T ss_pred chhheeeeC-CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 999999998 5666666665443 2456777899888888653 457888999999999999999999998888889
Q ss_pred ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 362 AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 362 ~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
+|+|+|++++..... .++.+++.++++++||.|.||+.|+..+++++||+++. +++.+++++++|++++.+
T Consensus 319 ~g~~i~i~l~~~~~~---~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~-~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 319 ASMYVWAKIPEPYAA---MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIE-NRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred EEEEEEEECCcccCC---CCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHh
Confidence 999999999864311 12578888888777999999999976666899999986 899999999999999875
No 54
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.4e-50 Score=395.35 Aligned_cols=355 Identities=23% Similarity=0.431 Sum_probs=294.2
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|+|+.+.++++ ++.+.+.+.+.. .....|++..|.+++|+++++++.+ ++ +++++++|++|
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~-~~--~~~~~~~i~~t 94 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNYD------------EEVLAYSHSQGIPELREAFAKYYKK-WG--IDVEPDEILIT 94 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHh------------cCCcCcCCCCCCHHHHHHHHHHHHH-hC--CCCCcceEEEc
Confidence 46899999988763 355555555432 1245799999999999999999984 44 55789999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcC-CHHHHHHHHHHHHhcCCceeEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQI-TPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~-d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
+|+++++.+++.+++++||.|++++|+|..+...++. .|++++.++++.+++|.+ +++.+++++++ ++++|+
T Consensus 95 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~------~~~~v~ 167 (397)
T PRK07568 95 NGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATS-AGVKIVPVTTKIEEGFHLPSKEEIEKLITP------KTKAIL 167 (397)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHH-cCCEEEEeecCcccCCCCCCHHHHHHhcCc------cceEEE
Confidence 9999999999999999999999999999999888874 899999999875556664 57899888764 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.+++++|+++|++++++||+||+|.++.|++..+.++.++... .+++++++||||.||++|+
T Consensus 168 i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~-----~~~~i~~~S~SK~~~~~G~ 242 (397)
T PRK07568 168 ISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGL-----EDRVIIIDSVSKRYSACGA 242 (397)
T ss_pred EECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCC-----cCCEEEEecchhhccCCCc
Confidence 99999999999999999999999999999999999999998876556666655331 4789999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc-cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSS-FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g 363 (442)
|+||++++++.+.+.+.+... .+..+.+.|.++..+++.. +.++++.++.++++++.+.+.|++. |+.+..|+||
T Consensus 243 R~G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~ 319 (397)
T PRK07568 243 RIGCLISKNKELIAAAMKLCQARLSPPTLEQIGAAALLDTP---ESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGA 319 (397)
T ss_pred ceEEEecCCHHHHHHHHHHhhccCCCCcHHHHHHHHHhhCC---HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcc
Confidence 999999866666665543322 3567889999999999763 3568888999999999999999887 7888889999
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHc-----CcEEEeCCCCCCCC---CCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHE-----VKLNISPGSSCHCS---EPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~gi~v~pg~~f~~~---~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|+|++++.. ++.++++.++++ +||.+.||+.|+.. ..+++||+++. +++++++++++|.++++
T Consensus 320 ~~~~~~l~~~-------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~-~~~~~~~~~~~l~~~l~ 391 (397)
T PRK07568 320 FYIIAKLPVD-------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL-NEEDLKRAMEILKEALE 391 (397)
T ss_pred eEEEEecCCC-------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHHHH
Confidence 9999999752 256788888764 59999999998532 24799999986 78999999999999999
Q ss_pred HHHhh
Q 046900 436 KRERR 440 (442)
Q Consensus 436 ~~~~~ 440 (442)
++..|
T Consensus 392 ~~~~~ 396 (397)
T PRK07568 392 KYNKR 396 (397)
T ss_pred Hhhcc
Confidence 88755
No 55
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=5.7e-50 Score=395.29 Aligned_cols=355 Identities=23% Similarity=0.374 Sum_probs=288.0
Q ss_pred CCceeeeecccc---cc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCc
Q 046900 47 PSGVIQMGLAEN---QV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNR 122 (442)
Q Consensus 47 ~~~~i~l~~~~n---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~ 122 (442)
+.++|+|+.+.+ .+ +++.+.+.+.+.... ....|++..|.++||+++++|+++.+| +.+++++
T Consensus 29 ~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~-----------~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~ 95 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKE-----------GHNYYGPSEGLPELREAIVKREKRKNG--VDITPDD 95 (398)
T ss_pred CCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHc-----------CCCCCCCCCCcHHHHHHHHHHHHHhcC--CCCChhh
Confidence 458899999987 34 445555555543211 124688888999999999999998766 5678999
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEE-ecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPI-HCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
|++|+|+++++.+++.+++++||.|++++|+|+.+...+.. .|.+++.+ +.+ +.+|.+|++.+++.+.+ ++
T Consensus 96 i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~v~~~~~~-~~~~~~d~~~l~~~~~~------~~ 167 (398)
T PRK08363 96 VRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKF-YGGVPVEYRTIE-EEGWQPDIDDIRKKITE------KT 167 (398)
T ss_pred EEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHH-cCCEEEEecccc-ccCCcCCHHHHHhhCCc------ce
Confidence 99999999999999999999999999999999999998884 89998888 444 35688999999988754 78
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
++++++|||||||.+++.+++++|+++|++++++||+||+|.++.|++ .+.++..+.. ..++++++||||.|+
T Consensus 168 ~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~-~~~~~~~~~~------~~~vi~~~SfSK~~~ 240 (398)
T PRK08363 168 KAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG-KHVSPGSLTK------DVPVIVMNGLSKVYF 240 (398)
T ss_pred EEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC-cccCHHHcCc------CCcEEEEecchhccC
Confidence 999999999999999999999999999999999999999999988865 3445555543 368999999999999
Q ss_pred CCCceeEEEee-cCHHHHHHHHH----cc-ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 046900 282 LPGFRVGTIYS-YNDKVVTTARR----MS-SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-G 354 (442)
Q Consensus 282 ~~G~RiG~i~~-~~~~~~~~~~~----~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 354 (442)
+||+|+||+++ .++.+.+.+.. .. ..+.++.++|.++..++.+. .+++++.++.++++++.+.+.|.+. +
T Consensus 241 ~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~l~~~~~~~~~~~~~l~~~L~~~~~ 317 (398)
T PRK08363 241 ATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGP---MDYLEEYMKKLKERRDYIYKRLNEIPG 317 (398)
T ss_pred CccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999997 33433333221 11 12567889999999988752 4568888999999999999999887 7
Q ss_pred CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 355 IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 355 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+.+..|+||||+|++++.... .+..+++..+++++||.+.||+.|+...++|+||+++. +++++++++++|++++
T Consensus 318 ~~~~~p~g~~~~~~~l~~~~~----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~ 392 (398)
T PRK08363 318 ISTTKPQGAFYIFPRIEEGPW----KDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP-PVEILEEAMDRFEEFM 392 (398)
T ss_pred CEecCCCeEEEEEEEeccCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence 888889999999998876210 02456666766777999999999976556899999986 8899999999999988
Q ss_pred HHH
Q 046900 435 QKR 437 (442)
Q Consensus 435 ~~~ 437 (442)
++.
T Consensus 393 ~~~ 395 (398)
T PRK08363 393 RER 395 (398)
T ss_pred HHh
Confidence 764
No 56
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=7.7e-50 Score=392.93 Aligned_cols=352 Identities=22% Similarity=0.313 Sum_probs=288.5
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.++++++ .+.+.+.+.+.... .....|++..|.++||+++++++++.+| ..+++++|++
T Consensus 28 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~~ 95 (386)
T PRK07550 28 DGPLIDLSQAVPGYPPPPELLRALAEAAAD----------PAAHLYGPVEGLPELREAYAAHYSRLYG--AAISPEQVHI 95 (386)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhC----------cCCcCCCCCCCCHHHHHHHHHHHHHHhC--CCCCcceEEE
Confidence 446799999998764 35555555543211 1245798889999999999999998876 4578899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++.+++++||.|+++.|+|+.+...++. .|++++.++++++++|.+|++.+++.+++ ++++++
T Consensus 96 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v~ 168 (386)
T PRK07550 96 TSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDM-LGIRPVYLPCDEGPGLLPDPAAAEALITP------RTRAIA 168 (386)
T ss_pred ecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh-cCCEEEEEecCCCcCCCCCHHHHHHHhcc------cCcEEE
Confidence 99999999999999999999999999999999988884 99999999998767888999999998875 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++||||||.++|.+++++|+++|+++|++||+||+|+++.++.....+...... ..+++++++||||.+|++|+
T Consensus 169 ~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~~G~ 243 (386)
T PRK07550 169 LVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPD-----WDDTLVHLYSFSKSYALTGH 243 (386)
T ss_pred EeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCC-----ccccEEEEecchhhccCccc
Confidence 9999999999999999999999999999999999999998765433333332211 13689999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc
Q 046900 286 RVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNA 362 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 362 (442)
|+||++++ +.+...+...... ..++.++|.++..++.+ .++|+++.++.++++++.+.+.|.+. ++.+ .+.+
T Consensus 244 RiG~i~~~-~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~g 318 (386)
T PRK07550 244 RVGAVVAS-PARIAEIEKFMDTVAICAPRIGQIAVAWGLPN---LADWRAGNRAEIARRRDAFRAVFARLPGWEL-LASG 318 (386)
T ss_pred ceEeeecC-HHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHhCCCcee-CCCc
Confidence 99999995 5555554443322 44678899999999975 35678888999999999999999886 6654 4678
Q ss_pred eEEEEEecCC-cccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSP-LLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 363 g~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
|+|+|++++. .. ++.++++.|++++||.|.||+.|+...++++||+++..+++++++++++|+++
T Consensus 319 ~~~~~~~~~~~~~------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 319 AYFAYVRHPFPDR------PSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred eEEEEecCCCCCC------CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 9999999875 22 36788998887779999999999755568999999976889999999999875
No 57
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-50 Score=401.68 Aligned_cols=356 Identities=20% Similarity=0.289 Sum_probs=274.8
Q ss_pred ceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHH-HhCCCCccC-CCcEEE
Q 046900 49 GVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQ-IRGGRAKFD-LNRIVV 125 (442)
Q Consensus 49 ~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~-~~~~~~~~~-~~~i~~ 125 (442)
++|+|+.+++.++. +.+.++..... ..+|+++.|.++||++|++++.+ .++...... .++|++
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~--------------~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~v 166 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGII--------------GDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFA 166 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHh--------------cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE
Confidence 57899999887754 45555444331 12599999999999999995544 333221111 348999
Q ss_pred ecChHHHHHHHHHh-----hcCCCCeEEEcCCCCcChHHhHhhhc--CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 126 TAGATAANELLTFI-----LADPGDALLVPTPYYPGFDRDLRWRT--GIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 126 t~G~~~ai~~~~~~-----l~~~gd~Vl~~~p~y~~~~~~~~~~~--G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
|+|+++++..++.+ +++|||.|++++|+|+.|...+.. . |+++++++.+++++|++|++.+++++.+
T Consensus 167 T~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l-~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~----- 240 (527)
T PRK09275 167 VEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPEL-PRYDLEVVHINADEENEWQYPDSELEKLRDP----- 240 (527)
T ss_pred eCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHH-cCCCeEEEEeecCcccCCCCCHHHHHhhcCC-----
Confidence 99999999999886 689999999999999999988774 4 5677777777777899999999987654
Q ss_pred CceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHh--cCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecC
Q 046900 199 MRVRGVLITNPSNPLGATIQRSVLEELLDFATR--KNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSL 276 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~--~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~ 276 (442)
++|+++++|||||||.+++.+++++|+++|++ ++++||+||+|.++.+ .+.++.... ++++|+++||
T Consensus 241 -~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~-------~~~~I~v~Sf 309 (527)
T PRK09275 241 -SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVL-------PYNTILVYSF 309 (527)
T ss_pred -CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhC-------CCCEEEEeeh
Confidence 88999999999999999999999999999964 4999999999999764 344554442 3789999999
Q ss_pred cccCCCCCceeEEEeecCHHHHHH----H--------------------------------HHcc--ccCCCcHHHHHH-
Q 046900 277 SKDLGLPGFRVGTIYSYNDKVVTT----A--------------------------------RRMS--SFTLISSQTQYL- 317 (442)
Q Consensus 277 SK~~g~~G~RiG~i~~~~~~~~~~----~--------------------------------~~~~--~~~~~s~~~q~~- 317 (442)
||.||++|||+||++++++.+.+. + ++.. ...+.+++.|.+
T Consensus 310 SK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~ 389 (527)
T PRK09275 310 SKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQM 389 (527)
T ss_pred hhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHH
Confidence 999999999999999976532211 1 1111 124567777776
Q ss_pred ----HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCccc---ccC-------hhhHH
Q 046900 318 ----LASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLE---EQT-------REGEL 383 (442)
Q Consensus 318 ----~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~---~~~-------~~~~~ 383 (442)
+.+++... +++++++++.+++||+.+.+.|. .++...+|+|+||+|++++.... +.. ..+..
T Consensus 390 al~~~~all~~~---~~~~~~~~~~~~~Rr~~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~ 465 (527)
T PRK09275 390 ALFSLFALLDEE---DAYKKAMKDIIRRRYKALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPV 465 (527)
T ss_pred HHHHHHHHHhCc---hHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHH
Confidence 23445432 45788899999999999998882 23344579999999999975321 000 11368
Q ss_pred HHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 384 ALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 384 ~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
+++.+|++++||.+.||+.|+. ..+++|||+++++++++.+++++|++++.++...
T Consensus 466 ~f~~~Ll~e~gV~v~PG~~Fg~-~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~~ 521 (527)
T PRK09275 466 DLLFRLAEETGVVLLPGGGFGG-PEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYEE 521 (527)
T ss_pred HHHHHHHhcCCEEEeCchhhCC-CCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999975 4678999999778999999999999999887653
No 58
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=5.2e-50 Score=395.71 Aligned_cols=349 Identities=20% Similarity=0.273 Sum_probs=274.9
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|+|+.++++++ ++.+.+.+.+...... .......|++..|.++||+++|+++.+. .+++++|++
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~------~~~~~~~Y~p~~g~~~lr~aia~~~~~~-----~~~~d~I~i 100 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELA------SEETFRGYGPEQGYPFLREAIAENDYRG-----RIDPEEIFI 100 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhccc------ccccccCCCCCCCCHHHHHHHHHHHHhc-----CCCHHHEEE
Confidence 457899999998764 3444444443321100 0012356988889999999999986431 278999999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCc-----------EEEEEecCCCCCCcCCHHHHHHHHHHH
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGI-----------KIVPIHCDSSNNFQITPQALEAAYKEA 194 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~-----------~v~~v~~~~~~~~~~d~~~l~~~l~~~ 194 (442)
|+|+++++..++ .++.+||.|++++|+|+.|...++. .|+ ++++++++++++|.+|.+..
T Consensus 101 t~Ga~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------- 171 (402)
T TIGR03542 101 SDGAKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVM-AGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE------- 171 (402)
T ss_pred CCCcHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHH-cCCccccccccccceEEEeecchhhCCCCCcccc-------
Confidence 999999999875 5568999999999999999999985 899 99999987666777664321
Q ss_pred HhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEe
Q 046900 195 ESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVY 274 (442)
Q Consensus 195 ~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~ 274 (442)
.+++++++||||||||.++|.+++++|+++|++++++||+||+|.+|.+++..+.++..+... .+++|+++
T Consensus 172 ----~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~-----~~~vi~~~ 242 (402)
T TIGR03542 172 ----PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGA-----KECAIEFR 242 (402)
T ss_pred ----CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCC-----cccEEEEe
Confidence 268899999999999999999999999999999999999999999988765434455444321 36899999
Q ss_pred cCcccCCCCCceeEEEeecCHHH-------HHHHH-Hc-cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Q 046900 275 SLSKDLGLPGFRVGTIYSYNDKV-------VTTAR-RM-SSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQM 345 (442)
Q Consensus 275 S~SK~~g~~G~RiG~i~~~~~~~-------~~~~~-~~-~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (442)
||||.||+||+|+||++++++.+ ...+. .. ...+.++.++|.++..++.+..+ +++++.++.++++++.
T Consensus 243 SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~~~ 320 (402)
T TIGR03542 243 SFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL--QPILEAISYYMENARI 320 (402)
T ss_pred cCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch--hHHHHHHHHHHHHHHH
Confidence 99999999999999999965433 12222 22 22345788999999999887553 3456677899999999
Q ss_pred HHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHH
Q 046900 346 IIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEV 425 (442)
Q Consensus 346 l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~ 425 (442)
+.+.|++.|+++..+.+|+|+|++++...+ +.++++.++++.||.+.||+.|+...++|+||+++. +++++++
T Consensus 321 ~~~~L~~~~~~~~~~~~~~f~~v~l~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~ 393 (402)
T TIGR03542 321 LRKALEAAGFKVYGGEHAPYLWVKTPEGIS------SWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRENIVE 393 (402)
T ss_pred HHHHHHhcCceecCCCceeEEEEECCCCCC------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHH
Confidence 999999888888888899999999986432 568899998777999999999976557899999877 8899999
Q ss_pred HHHHHHHH
Q 046900 426 ALKRIHNF 433 (442)
Q Consensus 426 ~l~~l~~~ 433 (442)
++++|+++
T Consensus 394 ~l~~l~~~ 401 (402)
T TIGR03542 394 ACERIKEA 401 (402)
T ss_pred HHHHHHhh
Confidence 99999875
No 59
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=7.5e-50 Score=387.75 Aligned_cols=333 Identities=20% Similarity=0.354 Sum_probs=274.0
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.+++||+.++|+.+ ++.+.+.+.+.. .....|+++ +.++||+++|+|++ +++++|++|
T Consensus 19 ~~~~~l~~~~~~~~~p~~~~~a~~~~~------------~~~~~Y~~~-~~~~lr~~ia~~~~--------~~~~~i~it 77 (354)
T PRK06358 19 NMILDFSANINPLGVPESLKQAITENL------------DKLVEYPDP-DYLELRKRIASFEQ--------LDLENVILG 77 (354)
T ss_pred cceEEecCCCCCCCCCHHHHHHHHHHH------------HhhhcCCCc-cHHHHHHHHHHHhC--------CChhhEEEC
Confidence 34789999998764 344555444432 124568775 68999999999984 689999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++..++.++ .+ +.|++++|+|+.|...++. .|++++.++++.+++|.+| +.+.+.+.. +++++++
T Consensus 78 ~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~d-~~~~~~~~~------~~~~v~~ 147 (354)
T PRK06358 78 NGATELIFNIVKVT-KP-KKVLILAPTFAEYERALKA-FDAEIEYAELTEETNFAAN-EIVLEEIKE------EIDLVFL 147 (354)
T ss_pred CCHHHHHHHHHHHh-CC-CcEEEecCChHHHHHHHHH-cCCeeEEEeCccccCCCcc-HHHHHhhcc------CCCEEEE
Confidence 99999999999987 34 6899999999999999884 9999999999877788999 666555533 6789999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
+|||||||.+++.+++++|+++|++++++||+||+|.+|.+++.. .+...... ..+++|+++||||.||+||+|
T Consensus 148 ~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~-----~~~~vi~~~S~SK~~gl~G~R 221 (354)
T PRK06358 148 CNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENET-ISMINYLE-----NFKNLIIIRAFTKFFAIPGLR 221 (354)
T ss_pred eCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccc-hhHHHhcc-----CCCCEEEEEechhhccCcchh
Confidence 999999999999999999999999999999999999999886542 33333222 247999999999999999999
Q ss_pred eEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEE
Q 046900 287 VGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLF 365 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~ 365 (442)
+||++++++.+.+.+.+....+.++.++|.++..++++.+ ++++.++.++++|+.+.+.|++. |+.+.+|+|+ |
T Consensus 222 iG~lv~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~-f 296 (354)
T PRK06358 222 LGYGLTSNKNLAEKLLQMREPWSINTFADLAGQTLLDDKE----YIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVN-F 296 (354)
T ss_pred heeeecCCHHHHHHHHHhCCCCcchHHHHHHHHHHhccHH----HHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcce-E
Confidence 9999987677777777766677889999999999997543 46778888999999999999887 7777778765 8
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+|++++. ..++++.|+++ ||.+.||+.|+..+++|+||+++. .++.+++++.|++++
T Consensus 297 ~~~~~~~---------~~~~~~~l~~~-gI~v~~~~~f~~~~~~~iRls~~~--~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 297 IFFKLEK---------PIDLRKELLKK-GILIRSCSNYRGLDENYYRVAVKS--REDNKKLLKALEVIL 353 (354)
T ss_pred EEEEcCc---------hHHHHHHHHHC-CeEEEECCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence 9999875 35788888876 999999999965456899999986 778999999998765
No 60
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=2e-49 Score=390.03 Aligned_cols=353 Identities=21% Similarity=0.352 Sum_probs=286.9
Q ss_pred CceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEEE
Q 046900 48 SGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~ 125 (442)
.++|+|+.+.+..+. +.+.+.+.+... .....|++..|.++||+++++++.+.++ +.++++ +|++
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~i~~ 90 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIA-----------GGVNQYPPGPGIPELRAAIAAQRRRRYG--LEYDPDTEVLV 90 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHh-----------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEEE
Confidence 367899988755422 222333332211 1235699889999999999999988776 446676 7999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCC-CCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS-NNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
|+|+++++.+++.+++++||+|+++.|+|+.+...+.. .|++++.++++++ ++|.+|++.|++.+.+ ++++|
T Consensus 91 t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v 163 (387)
T PRK07777 91 TVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAM-AGAHRVPVPLVPDGRGFALDLDALRAAVTP------RTRAL 163 (387)
T ss_pred eCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHH-CCCEEEEeecCCccCCCcCCHHHHHHhcCc------ccEEE
Confidence 99999999999999999999999999999999988885 8999999999775 4788999999998764 78899
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++|||||||.+++.+++++|+++|+++++++|+||+|.++.|++..+.++..+.. ..+++++++||||.||+||
T Consensus 164 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~~G 238 (387)
T PRK07777 164 IVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPG-----MRERTVTISSAAKTFNVTG 238 (387)
T ss_pred EEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCC-----CcCcEEEEeechhhccCcC
Confidence 99999999999999999999999999999999999999999886655555554422 1468999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||+++ ++.+.+.+..... .+..+++.|.++..++... ++|++++++.++++++.+.+.|.+.|+++.++++
T Consensus 239 lRiG~~~~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g 314 (387)
T PRK07777 239 WKIGWACG-PAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHE---DAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAG 314 (387)
T ss_pred ceeEEEec-CHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCc
Confidence 99999998 4556666554333 3456778898888888753 3567888999999999999999998989889999
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC---CCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS---EPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~---~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
|||+|++++.... .++.+++++|++++||.|.||+.|+.. ..+++||+++. +++++++++++|+++.
T Consensus 315 ~~~~~~~~~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 315 TYFLCADPRPLGY----DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK-RDDTLDEAIRRLRALR 384 (387)
T ss_pred ceEEEecccccCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 9999999764211 136789999987779999999998642 24689999998 8999999999998764
No 61
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-49 Score=389.09 Aligned_cols=359 Identities=26% Similarity=0.480 Sum_probs=298.7
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|+|+.+.+.++ ++.+.+.+.+.... ....|++..|..+||+++|+++++.++ ..+++++|++
T Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~~ 96 (393)
T PRK05764 30 GRDVISLGAGEPDFDTPEHIKEAAIEALDD-----------GKTKYTPAAGIPELREAIAAKLKRDNG--LDYDPSQVIV 96 (393)
T ss_pred cCCEEEeCCCCCCCCCCHHHHHHHHHHHhc-----------CCCCcCCCCChHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 356899999988775 35555554443211 134698889999999999999988876 4478899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++.+++++||.|++++|+|..+...++. .|++++.++++++++|.+|++.+++.+.+ ++++++
T Consensus 97 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 169 (393)
T PRK05764 97 TTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKL-AGGVPVFVPTGEENGFKLTVEQLEAAITP------KTKALI 169 (393)
T ss_pred eCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHH-cCCEEEEEecCcccCCcCCHHHHHHhhCc------cceEEE
Confidence 99999999999999999999999999999999998884 89999999998777899999999998854 778999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.++|.+++++|+++|++|++++|+||+|+++.+++..+.++.++..+ ..+++++++||||.+|++|+
T Consensus 170 ~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~----~~~~~i~~~s~SK~~~~~G~ 245 (393)
T PRK05764 170 LNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPE----LRDRTITVNGFSKAYAMTGW 245 (393)
T ss_pred EECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCC----CcCCEEEEecCcccccCccc
Confidence 99999999999999999999999999999999999999988866555566655332 24789999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNA 362 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 362 (442)
|+||+++ ++.+.+.+..... .+.++++.|.++..++.. . .+++++.++.++++++.+.+.|+++ |+.+..|+|
T Consensus 246 RiG~i~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g 321 (393)
T PRK05764 246 RLGYAAG-PKELIKAMSKLQSHSTSNPTSIAQYAAVAALNG--P-QDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEG 321 (393)
T ss_pred eeEEEec-CHHHHHHHHHHHhhcccCCChHHHHHHHHHHcC--C-hHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCc
Confidence 9999998 5666666655443 356788999999999873 1 4567888999999999999999988 899888999
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
|+|+|++++......+ .++.+++..+++++||.+.||..|+. ++++||+++. +++++++++++|.++++++
T Consensus 322 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~vRis~~~-~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 322 AFYVFPNVSKLLGKSI-TDSLEFAEALLEEAGVAVVPGIAFGA--PGYVRLSYAT-SLEDLEEGLERIERFLESL 392 (393)
T ss_pred ceEEEEeccccccccc-CCHHHHHHHHHHhCCEEEccccccCC--CCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 9999999986432111 12478888888877999999999864 6899999998 8999999999999998765
No 62
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=3.3e-50 Score=392.98 Aligned_cols=357 Identities=35% Similarity=0.547 Sum_probs=298.1
Q ss_pred ceeeeeccccccc--HHHHHHHHHhCCC-CcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEE
Q 046900 49 GVIQMGLAENQVS--FDLLEEYLEQQPE-ASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIV 124 (442)
Q Consensus 49 ~~i~l~~~~n~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~ 124 (442)
++|||+++++... .+.+++++++... .. .......|+++.|+++||+++|+|+++..+ +.++++ +|+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~~i~ 72 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAA-------TSSSFLGYPPPQGYPELREAIADFLGRRYG--VPVDPEANIL 72 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHH-------HHTGCTSSTCTTHHHHHHHHHHHHHHHHHT--HHTTGGEGEE
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhh-------cccccccCCCchhhHHHHHHHHHHhhhccC--cccccceEEE
Confidence 5799999987664 1222222222211 00 012457899999999999999999997665 667888 999
Q ss_pred EecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 125 VTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
+++|+++++..++..+ .++||.|++++|+|+.+...++. .|+++++++++.+++|.+|++.|++.+++...++.++++
T Consensus 73 ~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 151 (363)
T PF00155_consen 73 VTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAARL-LGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKA 151 (363)
T ss_dssp EESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHH-TTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEE
T ss_pred EecccccchhhhhhcccccccccceecCCccccccccccc-cCceeeeccccccccccccccccccccccccccccccce
Confidence 9999999999999999 88999999999999999999995 999999999887788999999999999875544435789
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
+++++|+||||.+++.+++++|+++|++||++||+||+|+++.++...+.+....... ..++++++||||.||++
T Consensus 152 v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-----~~~vi~~~S~SK~~g~~ 226 (363)
T PF00155_consen 152 VLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDE-----DDNVIVVGSLSKSFGLP 226 (363)
T ss_dssp EEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTT-----TSTEEEEEESTTTTTSG
T ss_pred eeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccc-----cccceeeeecccccccc
Confidence 9999999999999999999999999999999999999999998875533332222222 35699999999999999
Q ss_pred CceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 284 GFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+|+||+++ ++.+.+.++.....+..+++.|.++.+++.+.....+++++.++.++++++++.+.|.+.|+.+.++++|
T Consensus 227 GlRvG~i~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~ 305 (363)
T PF00155_consen 227 GLRVGYIVA-PPELIERLRRFQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPEAG 305 (363)
T ss_dssp GGTEEEEEE-EHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHSBS
T ss_pred ccccccccc-hhhhhhhhhhccccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeeccCc
Confidence 999999999 6777778877776666689999999999988765556899999999999999999999999999999999
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRI 430 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l 430 (442)
+|+|+.++.. ++.+++++|++++||.+.||..|+. ++++||+++..+++++++++++|
T Consensus 306 ~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~pg~~~~~--~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 306 FFLWVRLDPN-------DAEELAQELLEEYGILVRPGSYFGV--PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp SEEEEEESHH-------HHHHHHHHHHHHHTEEEEEGGGGTS--TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred cEEEEEcccc-------hHHHHHHHHHHhCCEEEEecCCCCC--CCEEEEEeccCCHHHHHHHHhhC
Confidence 9999998763 3688999999988999999999886 78999999655999999999986
No 63
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=5e-49 Score=384.12 Aligned_cols=335 Identities=20% Similarity=0.368 Sum_probs=267.8
Q ss_pred CCCCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCc-cCCCc
Q 046900 45 TNPSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK-FDLNR 122 (442)
Q Consensus 45 ~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~~~ 122 (442)
.++.++|+|+.+++..+ .+.+.+.+.+.. ...+|+++.|.++||+++|+|+.+.++ ++ +++++
T Consensus 24 ~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~-------------~~~~Y~~~~G~~~lr~~ia~~l~~~~~--~~~~~~~~ 88 (364)
T PRK07865 24 AHPDGIVDLSVGTPVDPVPPVIQEALAAAA-------------DAPGYPTTAGTPELREAIVGWLARRRG--VTGLDPAA 88 (364)
T ss_pred hcCCCEEEcCCCCCCCCCCHHHHHHHHHHH-------------hhCCCCCccCCHHHHHHHHHHHHHHcC--CCCCCccc
Confidence 45567899999876544 355555555432 123799989999999999999998776 44 78999
Q ss_pred EEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 123 IVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
|++|+|+++++..++.++ +++||.|++++|+|+.|...++. .|++++.++. .++++. .++
T Consensus 89 I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~---------~~~l~~---------~~~ 149 (364)
T PRK07865 89 VLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARL-AGATVVRADS---------LTELGP---------QRP 149 (364)
T ss_pred EEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHh-cCCEEEecCC---------hhhCCc---------ccc
Confidence 999999999999998888 79999999999999999998885 8999888751 223322 267
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
++++++|||||||.+++.+++++|+++|++++++||+||+|.++.+++.. .+... ........+++++++||||.||
T Consensus 150 ~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~--~~~~~~~~~~~i~~~S~SK~~~ 226 (364)
T PRK07865 150 ALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEP-VSILD--PRVCGGDHTGLLAVHSLSKQSN 226 (364)
T ss_pred eEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCC-Ccccc--ccccCCccceEEEEeechhccC
Confidence 89999999999999999999999999999999999999999998886532 22211 1000012478999999999999
Q ss_pred CCCceeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 046900 282 LPGFRVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK 359 (442)
Q Consensus 282 ~~G~RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 359 (442)
+||+|+||+++ ++.+.+.++... ..+.++++.|.++.+++.+. +++++.++.++++++.+.+.|++.|+.+..
T Consensus 227 ~~GlRiG~i~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 301 (364)
T PRK07865 227 LAGYRAGFVAG-DPALVAELLEVRKHAGMMVPAPVQAAMVAALGDD----AHVREQRERYARRRAVLRPALEAAGFRVDH 301 (364)
T ss_pred CCceeeEEEec-CHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 99999999998 456666655433 23567889999999999863 346778889999999999999999988888
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIH 431 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~ 431 (442)
+++|+|+|++++. +..++++.|.++ ||.+.||..|+...++++||+++. +++++++++++|+
T Consensus 302 ~~~~~~~~~~~~~--------~~~~~~~~l~~~-gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 363 (364)
T PRK07865 302 SEAGLYLWATRGE--------DCWDTVAWLAER-GILVAPGDFYGPAGAQHVRVALTA-TDERIAAAVERLA 363 (364)
T ss_pred CCccEEEEEeCCC--------CHHHHHHHHHHC-CEEEeCccccCcCCCCEEEEEecC-CHHHHHHHHHHhh
Confidence 9999999998743 245666766555 999999998875557899999987 7899999999985
No 64
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-49 Score=375.32 Aligned_cols=330 Identities=22% Similarity=0.381 Sum_probs=283.2
Q ss_pred ceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 49 GVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 49 ~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
++++|++|+|++++ +.+.+.+..... ....||++ ...+|+++++++++. .++++|++++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~------------~~~rYPd~-~~~~l~~a~a~~~~~-------~~~~~V~~gn 82 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALD------------KLNRYPDP-DYRELRAALAEYYGV-------VDPENVLVGN 82 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHH------------hhccCCCC-cHHHHHHHHHHHhCC-------CCcceEEEcC
Confidence 68999999999976 555555554431 35689988 679999999999862 5789999999
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe
Q 046900 128 GATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT 207 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~ 207 (442)
|+++.|..++++++.+||.|+++.|+|..|...++. .|++++.++..+ |.+|++.+.+.+.+ ++++|++|
T Consensus 83 Gsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~-~g~~~~~v~~~~---~~~d~~~~~~~~~~------~~~lv~i~ 152 (356)
T COG0079 83 GSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQL-AGAEVVKVPLKE---FRLDLDAILAAIRD------KTKLVFLC 152 (356)
T ss_pred ChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHh-cCCeEEEecccc---cccCHHHHHHhhhc------CCCEEEEe
Confidence 999999999999999999999999999999999995 999999999875 88999999999875 78999999
Q ss_pred CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee
Q 046900 208 NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV 287 (442)
Q Consensus 208 ~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri 287 (442)
|||||||..++.++++++++.+.+ +.+||+||+|.+|. + .+...+... ++|+++++||||+||++|+|+
T Consensus 153 nPNNPTG~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~--~---~~~~~l~~~-----~~nlivlRTfSKa~gLAGlRl 221 (356)
T COG0079 153 NPNNPTGTLLPREELRALLEALPE-GGLVVIDEAYIEFS--P---ESSLELLKY-----PPNLIVLRTFSKAFGLAGLRV 221 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEeCchhhcC--C---chhhhhccC-----CCCEEEEEecHHhhhcchhce
Confidence 999999999999999999999988 99999999999965 3 233333333 578999999999999999999
Q ss_pred EEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCe-eecCCceEEE
Q 046900 288 GTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIE-CLKGNAGLFC 366 (442)
Q Consensus 288 G~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~g~~~ 366 (442)
||+++ ++.+.+.+++...+|.++.++|.++.+++++.+ ++++..+.+++.|+++.+.|++.|+. +.+++ ++|+
T Consensus 222 Gy~ia-~~~~i~~l~~vr~p~~v~~~a~~aa~aal~~~~----~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~-aNFv 295 (356)
T COG0079 222 GYAIA-NPELIAALNKVRPPFNVSSPALAAAIAALRDAD----YLEESVERIREERERLYAALKALGLFGVFPSQ-ANFV 295 (356)
T ss_pred eeccC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHcccHH----HHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC-CcEE
Confidence 99988 788999999999999999999999999999764 57888999999999999999998855 66666 5599
Q ss_pred EEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 367 WMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
+++++.. . +..+++.|+++ ||.|+.+.. .+..++|+||++++ +++.++++++|++++..
T Consensus 296 lv~~~~~------~-~~~l~~~L~~~-giivR~~~~-~~~~~~~lRitvgt--~een~~ll~AL~~~~~~ 354 (356)
T COG0079 296 LVRVPDA------E-AAALAEALLKK-GILVRDCSS-VGLLPGYLRITVGT--PEENDRLLAALREVLKG 354 (356)
T ss_pred EEECCCc------c-HHHHHHHHHHC-CEEEEeCCC-CCCCCCeEEEEeCC--HHHHHHHHHHHHHHHhc
Confidence 9998761 1 34678888777 999999876 44457899999996 67789999999998764
No 65
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=8.7e-49 Score=386.41 Aligned_cols=345 Identities=19% Similarity=0.297 Sum_probs=270.3
Q ss_pred Cceeeeecccc---c--cc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 48 SGVIQMGLAEN---Q--VS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 48 ~~~i~l~~~~n---~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
+++|||+.+.+ . ++ .+.+.+.+.+.... .....|++..|.++||+++++|+.+..+ ..++++
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~----------~~~~~Y~~~~G~~~lR~aia~~~~~~~~--~~~~~~ 93 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLET----------ETTKNYLPIEGLAAYRQAVQELLFGADS--PALAAG 93 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhccc----------ccCCCcCCCCCCHHHHHHHHHHhcCCCC--cccccC
Confidence 36799999852 1 23 24566665554321 1245799999999999999999975432 235788
Q ss_pred cE--EEecChHHHHHHHHHhh--cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RI--VVTAGATAANELLTFIL--ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i--~~t~G~~~ai~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
+| ++|+|+++++.++++++ +++||.|++++|+|+.|...++. .|++++.+|+..+++|++|++.+++.+++.
T Consensus 94 ~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~-~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~--- 169 (396)
T PRK09257 94 RVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEA-AGLEVKTYPYYDAATKGLDFDAMLADLSQA--- 169 (396)
T ss_pred eEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHH-cCCcEEEEeccccccCccCHHHHHHHHHhC---
Confidence 87 99999999999998766 58999999999999999999995 999999999843445889999999988742
Q ss_pred CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC-CCCcccHHHHHhhhcCCCCCcEEEEecC
Q 046900 198 DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS-SSEFVSIAEILEARQYKDSERVHIVYSL 276 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~-~~~~~s~~~~~~~~~~~~~~~vi~~~S~ 276 (442)
..++++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.++ +..+.++..+... .+++|+++||
T Consensus 170 ~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~-----~~~vi~i~Sf 244 (396)
T PRK09257 170 PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAA-----GLELLVASSF 244 (396)
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhc-----CCcEEEEEEc
Confidence 123456677899999999999999999999999999999999999998875 2224455555432 4689999999
Q ss_pred cccCCCCCceeEEEee--cCHH-HH---HHHHHc--cccCCCcHHHHHHHHHHhcCchh---HHHHHHHHHHHHHHHHHH
Q 046900 277 SKDLGLPGFRVGTIYS--YNDK-VV---TTARRM--SSFTLISSQTQYLLASMLSNKKF---TENYIKTNRERLQKRYQM 345 (442)
Q Consensus 277 SK~~g~~G~RiG~i~~--~~~~-~~---~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~ 345 (442)
||.|+++|+|+||+++ +++. +. ..++.. ...+.++++.|.+++.++.++.+ ..++++++++.|+++|+.
T Consensus 245 SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~ 324 (396)
T PRK09257 245 SKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQL 324 (396)
T ss_pred CCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988999999973 3433 22 222222 22344578899999999988653 256788899999999999
Q ss_pred HHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHH
Q 046900 346 IIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQ 421 (442)
Q Consensus 346 l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e 421 (442)
+.+.|++.+ +.+..|+||||+|++++. +++.++++++||.+.|. + ||+|+.++++
T Consensus 325 l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~-----------~~~~~l~~~~~V~~~p~--------~--ri~~~~~~~~ 383 (396)
T PRK09257 325 LVEALKAKGPSRDFDFIARQRGMFSYSGLTP-----------EQVDRLREEFGVYAVGS--------G--RINVAGLNES 383 (396)
T ss_pred HHHHHHhcCCCCCcccccccceEEEecCCCH-----------HHHHHHHHcCCEEEcCC--------C--eEEEeeCCHH
Confidence 999999874 667789999999998752 35567778889999872 2 9999867999
Q ss_pred HHHHHHHHHHHHH
Q 046900 422 TLEVALKRIHNFM 434 (442)
Q Consensus 422 ~i~~~l~~l~~~l 434 (442)
++++++++|++++
T Consensus 384 ~i~~~~~~i~~~~ 396 (396)
T PRK09257 384 NIDYVAEAIAAVL 396 (396)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999998753
No 66
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.5e-49 Score=384.87 Aligned_cols=328 Identities=15% Similarity=0.274 Sum_probs=269.4
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|+|+.|+|+++ ++.+.+.+.+... ....|+ ..|.++||+++|+|++ +++++|++|
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~------------~~~~Yp-~~g~~~Lr~aia~~~~--------~~~~~I~vt 87 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWL------------DHALYP-DGGATTLRQTIANKLH--------VKMEQVLCG 87 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHH------------hcCcCC-CCCHHHHHHHHHHHhC--------CCcceEEEC
Confidence 47899999999985 3555555554321 123475 4588999999999984 689999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++.+++.+++++||.|++++|+|+.|...+.. .|++++.++++. +.+|++.+++.+++ +++++++
T Consensus 88 ~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~-~g~~v~~v~~~~---~~~d~~~l~~~~~~------~~~~v~i 157 (366)
T PRK01533 88 SGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAII-EGCEVKEVALNN---GVYDLDEISSVVDN------DTKIVWI 157 (366)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHH-cCCEEEEeecCC---CCcCHHHHHHHhCc------CCcEEEE
Confidence 9999999999999999999999999999999999985 999999999853 35899999988764 7789999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
||||||||.+++.+++++|+++|++++ ++|+||+|.++.+.+. ..+....... .+++|+++||||.||+||+|
T Consensus 158 ~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~-~~~~~~~~~~-----~~~vi~~~SfSK~~~l~GlR 230 (366)
T PRK01533 158 CNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD-FPETLPLLEK-----HKNILVLRTFSKAYGLASFR 230 (366)
T ss_pred eCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc-CcchhHHhcc-----CCCEEEEeCchHHhcChHHH
Confidence 999999999999999999999998766 5778999998876542 2233333222 47899999999999999999
Q ss_pred eEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEE
Q 046900 287 VGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFC 366 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~ 366 (442)
+||+++ ++.+.+.+.+....+.++.++|.++.++|++.+ +.++.++.++++++++.+.++..|+++.+++++ |+
T Consensus 231 iG~~i~-~~~~~~~l~~~~~~~~~~~~~q~aa~~~l~~~~----~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~~~n-f~ 304 (366)
T PRK01533 231 VGYAVG-HEELIEKLNVVRLPFNVSSLAQKAATIAFGDDE----FIEEIVRVNTEGLRQYESFCKENEIPFYQSQTN-FI 304 (366)
T ss_pred HhHHhC-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHhCCCccCCCcCc-EE
Confidence 999999 567777777666668899999999999998654 456667778888889999998889888888655 89
Q ss_pred EEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 367 WMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
|++++. +.++.+.|+++ ||.|++ | ++++||+++. .+++++++++|+++++..+
T Consensus 305 ~~~~~~---------~~~~~~~l~~~-GI~Vr~---~----~~~iRis~~~--~~~~~~l~~al~~~~~~~~ 357 (366)
T PRK01533 305 FLPVEN---------GGEIYEACAHA-GFIIRP---F----PNGVRITVGT--REQNEGVISVLQQHFENKK 357 (366)
T ss_pred EEeCCC---------HHHHHHHHHHC-CcEEcc---C----CCceEEeCCC--HHHHHHHHHHHHHHHHhcc
Confidence 999863 45678888765 999998 4 3689999986 7889999999999876543
No 67
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.9e-48 Score=408.33 Aligned_cols=366 Identities=19% Similarity=0.276 Sum_probs=285.7
Q ss_pred CCCCCCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC-
Q 046900 43 ESTNPSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL- 120 (442)
Q Consensus 43 ~~~~~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~- 120 (442)
+...+.++|+|++++|++++ +.+.+.+.+.... ..+ ..|++++|+++++|+.+++| ++.++
T Consensus 692 ~~~~g~~vI~LsinE~d~ppPp~V~eAi~eal~~-------------~~~--s~g~pdlr~aLa~~la~~~G--v~~d~~ 754 (1082)
T PLN02672 692 SGSQESSLIHMDVDESFLPVPSAVKASIFESFVR-------------QNI--SESETDPRPSILQFIKSNYG--FPTDSC 754 (1082)
T ss_pred cccCCCCEEEEeCCCCCCCCCHHHHHHHHHHHhh-------------cCC--CCCChHHHHHHHHHHHHHhC--cCCCCC
Confidence 34445689999999999864 5566655543210 112 34667899999999999877 44544
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
++|++|+|+++++..++.+++++||.|+++.|+|+.|...++. .|++++.+|++++++|.+|++.+++++++. +
T Consensus 755 e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~-~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~-----~ 828 (1082)
T PLN02672 755 TEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKF-LKANFRRIPTKSSDGFKLTAKTLASTLETV-----K 828 (1082)
T ss_pred CEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHH-cCCEEEEEecccccCCCCCHHHHHHHhccC-----C
Confidence 5899999999999999999999999999999999999999995 999999999987778999999999988531 2
Q ss_pred eeEEEEeCCC-CCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc--ccHHHHHhhhcC-CCCCcEEEEecC
Q 046900 201 VRGVLITNPS-NPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF--VSIAEILEARQY-KDSERVHIVYSL 276 (442)
Q Consensus 201 ~~~v~l~~P~-NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~--~s~~~~~~~~~~-~~~~~vi~~~S~ 276 (442)
.++++++||| ||||.+++.+++++|+++|++|+++||+||+|+++.|++... .++.+....... ....+|++++||
T Consensus 829 ~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~Sf 908 (1082)
T PLN02672 829 KPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGL 908 (1082)
T ss_pred CCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCc
Confidence 3579999997 999999999999999999999999999999999999976431 122222211000 012479999999
Q ss_pred cccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHh---c--CchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046900 277 SKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASML---S--NKKFTENYIKTNRERLQKRYQMIIEGLR 351 (442)
Q Consensus 277 SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l---~--~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 351 (442)
||.|++||+|+||++++++.+++.+.+...........|.++.+++ . +.+| .+++++.++.++++|+++.+.|+
T Consensus 909 SKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~-~~~l~e~r~~Lk~rRd~L~e~L~ 987 (1082)
T PLN02672 909 STELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDL-LDGVAEQKKILKSRAERLKETLE 987 (1082)
T ss_pred HHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999777677777654333333334444444333 2 3444 56788889999999999999999
Q ss_pred hCCCeeecCCceEEEEEecCCccc----ccC-------hhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCH
Q 046900 352 SAGIECLKGNAGLFCWMNLSPLLE----EQT-------REGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSE 420 (442)
Q Consensus 352 ~~g~~~~~~~~g~~~~~~~~~~~~----~~~-------~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~ 420 (442)
+.|+++.+|+||||+|++++.... ... ..++.++++.|++++||.+.||+.|+. ++|+||+++. ++
T Consensus 988 ~~Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~--~g~~RIsfa~-~~ 1064 (1082)
T PLN02672 988 ACGWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI--PGYCRFSFAL-ED 1064 (1082)
T ss_pred HCCCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC--CCeEEEEecC-CH
Confidence 999999999999999998754221 000 114678999999988999999988753 6899999997 88
Q ss_pred HHHHHHHHHHHHHHH
Q 046900 421 QTLEVALKRIHNFMQ 435 (442)
Q Consensus 421 e~i~~~l~~l~~~l~ 435 (442)
+++++++++|+++..
T Consensus 1065 e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1065 SEFDRALKAIARFKE 1079 (1082)
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999998754
No 68
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-48 Score=385.45 Aligned_cols=346 Identities=17% Similarity=0.261 Sum_probs=270.3
Q ss_pred Cceeeeeccccc-c-----cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 48 SGVIQMGLAENQ-V-----SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 48 ~~~i~l~~~~n~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
+++|||+.+.++ . +.+.+.+.+...... ....+|+++.|.++||+++|+|+.+..+ ..++++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~----------~~~~~Y~~~~G~~~lR~aia~~~~~~~~--~~~~~~ 96 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEK----------NLDKEYLPIEGLQSFIEAAQKLLFGEAS--YALAEK 96 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccc----------cCCCCCCCCCCCHHHHHHHHHHhcCCCc--cccccC
Confidence 367899988742 2 234445444332210 2346899999999999999999865432 346889
Q ss_pred cEE--EecChHHHHHHHHH---hhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 122 RIV--VTAGATAANELLTF---ILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 122 ~i~--~t~G~~~ai~~~~~---~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
+|+ .|.|+++++.+++. +++++||.|++++|+|+.|...++. .|++++.+|+.++++|++|++.+++.+++.
T Consensus 97 ~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~-~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~-- 173 (404)
T PTZ00376 97 RIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKS-AGLNVKEYRYYDPKTKGLDFDGMLEDLRTA-- 173 (404)
T ss_pred eEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH-cCCceeeccccCcccCCcCHHHHHHHHHhC--
Confidence 998 59999999988864 6789999999999999999999995 999999999965556899999999998642
Q ss_pred cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC--CcccHHHHHhhhcCCCCCcEEEEe
Q 046900 197 KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS--EFVSIAEILEARQYKDSERVHIVY 274 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~--~~~s~~~~~~~~~~~~~~~vi~~~ 274 (442)
..++++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++. .+.++..+... .+++++++
T Consensus 174 -~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-----~~~vi~i~ 247 (404)
T PTZ00376 174 -PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAER-----GVEFLVAQ 247 (404)
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhc-----CCcEEEEE
Confidence 12456778899999999999999999999999999999999999999988541 23344444332 36899999
Q ss_pred cCcccCCCCCceeEEEe--ecCHHHHH----HHHHc-cccC-CCcHHHHHHHHHHhcCchhHHHH---HHHHHHHHHHHH
Q 046900 275 SLSKDLGLPGFRVGTIY--SYNDKVVT----TARRM-SSFT-LISSQTQYLLASMLSNKKFTENY---IKTNRERLQKRY 343 (442)
Q Consensus 275 S~SK~~g~~G~RiG~i~--~~~~~~~~----~~~~~-~~~~-~~s~~~q~~~~~~l~~~~~~~~~---~~~~~~~~~~~~ 343 (442)
||||.|++||+|+||++ ..++.+.+ .+.+. ...+ ..++++|.++..+++++++.++| +++.++.++++|
T Consensus 248 SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r 327 (404)
T PTZ00376 248 SFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMR 327 (404)
T ss_pred eCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999983 22444333 23322 2233 34678999999999986554333 566778999999
Q ss_pred HHHHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCC
Q 046900 344 QMIIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMS 419 (442)
Q Consensus 344 ~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~ 419 (442)
+.+.+.|++.+ +.+..|+||||+|++++ .+++++|++++||.+.|| + ||+++.++
T Consensus 328 ~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~-----------~~~~~~L~~~~~v~v~p~--------~--Ris~~~~~ 386 (404)
T PTZ00376 328 QLLYDELKALGSPGDWEHIINQIGMFSFTGLT-----------KEQVERLIEKYHIYLLDN--------G--RISVAGLT 386 (404)
T ss_pred HHHHHHHHhcCCCCcccccccCceEEEecCCC-----------HHHHHHHHHhCCEeecCC--------C--eEEEeccC
Confidence 99999999875 44567899999999874 267888999989999996 2 99998568
Q ss_pred HHHHHHHHHHHHHHHH
Q 046900 420 EQTLEVALKRIHNFMQ 435 (442)
Q Consensus 420 ~e~i~~~l~~l~~~l~ 435 (442)
.+++++++++|++++.
T Consensus 387 ~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 387 SKNVDYVAEAIHDVVR 402 (404)
T ss_pred HHhHHHHHHHHHHHHh
Confidence 9999999999999875
No 69
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.2e-48 Score=388.20 Aligned_cols=385 Identities=17% Similarity=0.220 Sum_probs=282.3
Q ss_pred ccchhhhhcccCCCCcchhhhhhhhcCCCCCCCCCCceeeeecccccc-c--HHHHHHHHHhCCCCcccCCCCCCCCccc
Q 046900 13 GLSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVIQMGLAENQV-S--FDLLEEYLEQQPEASTWGKGAPGFRENA 89 (442)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (442)
.+||||-+..+ ......-|..... ... ..++|+|+.+.+.. + .+.+.+.+......... .....
T Consensus 2 ~~~~~~~~~~~--~~~~~~~~~~~~~----~~~-~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 68 (416)
T PRK09440 2 QFSKFGEKFTR--HSGITQLMDDLND----GLR-TPGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKL------TEALG 68 (416)
T ss_pred chhHHHHHHHh--hhcHHHHHHHHHH----Hhc-CCCceeccCCCCCccCCHHHHHHHHHHHHhcCccc------ccccc
Confidence 47889888763 3333322333322 222 25679999886542 2 24555555543221100 01345
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC-----CCCeEEE-cCCCCcChHHhHhh
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD-----PGDALLV-PTPYYPGFDRDLRW 163 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~-----~gd~Vl~-~~p~y~~~~~~~~~ 163 (442)
.|+++.|.++||++||+|+.+++| +.+++++|++|+|+++++.+++.++++ +||.|++ ++|+|+.|...+..
T Consensus 69 ~Y~~~~G~~~LR~aia~~~~~~~g--~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~ 146 (416)
T PRK09440 69 NYDGPQGKDELIEALAALLNERYG--WNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLE 146 (416)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhC--CCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhc
Confidence 799999999999999999998876 568899999999999999999999985 5899999 79999999875542
Q ss_pred hcC----cEEEEEecCCC-CCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 164 RTG----IKIVPIHCDSS-NNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 164 ~~G----~~v~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
.| .....++++.+ .+|.+|++.|+ +. .++++++++|||||||.++|.+++++|+++|++++++||+
T Consensus 147 -~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~------~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~ 217 (416)
T PRK09440 147 -EDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID------EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLI 217 (416)
T ss_pred -cCceeecccccccccccccccCCCHHHcc--cC------CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEE
Confidence 33 11122333322 14789999887 22 2678999999999999999999999999999999999999
Q ss_pred eccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHH
Q 046900 239 DEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQY 316 (442)
Q Consensus 239 De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~ 316 (442)
||+|.++.. .. ......+. ..+++|+++||||. ++||+|+||+++ ++.+.+.+...... ..++.+.|.
T Consensus 218 De~Y~~~~~-~~---~~~~~~~~----~~~~vI~~~SfSK~-~~pGlRiG~~i~-~~~l~~~~~~~~~~~~~~~s~~~q~ 287 (416)
T PRK09440 218 DNAYGPPFP-GI---IFSEATPL----WNPNIILCMSLSKL-GLPGVRCGIVIA-DEEIIEALSNMNGIISLAPGRLGPA 287 (416)
T ss_pred eCCccccCC-Cc---chhhcCcc----ccCCeEEEeccccc-CCCcceEEEEeC-CHHHHHHHHHHHHHhccCCCcHHHH
Confidence 999986431 11 11111110 13789999999996 899999999999 55666666554433 457889999
Q ss_pred HHHHHhcCchhHHHHHHH-HHHHHHHHHHHHHHHHHhC----CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHH
Q 046900 317 LLASMLSNKKFTENYIKT-NRERLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLH 391 (442)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 391 (442)
++..++.++++ .++..+ .++.|+++++.+.+.|.+. ++.+..|+||+|+|++++.... ++.++++.+.+
T Consensus 288 ~~~~~l~~~~~-~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~-----~~~~~~~~l~~ 361 (416)
T PRK09440 288 IAAEMIESGDL-LRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLPI-----TTEELYQRLKA 361 (416)
T ss_pred HHHHHhccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCCC-----CHHHHHHHHHH
Confidence 99999998876 444444 6888999999999888764 4566789999999999986211 25677777755
Q ss_pred cCcEEEeCCCCCCCCC-------CCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 392 EVKLNISPGSSCHCSE-------PGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 392 ~~gi~v~pg~~f~~~~-------~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+||.|.||+.|+... .+++||+++. +++++++++++|++++++..+
T Consensus 362 -~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~~~~l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 362 -RGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-DDEEIEKGIAILAEEVEKAYA 414 (416)
T ss_pred -CCEEEechHhhCCCCccccCCcCceEEEEecC-CHHHHHHHHHHHHHHHHHHhh
Confidence 599999999985321 3589999987 789999999999999987544
No 70
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1e-48 Score=388.30 Aligned_cols=353 Identities=18% Similarity=0.289 Sum_probs=269.7
Q ss_pred ceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHH-HHHHHHhCCCCccCCC--cEE
Q 046900 49 GVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMA-SFMEQIRGGRAKFDLN--RIV 124 (442)
Q Consensus 49 ~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia-~~l~~~~~~~~~~~~~--~i~ 124 (442)
++|+++.+++.+++ +.+.++..... ..+|+++.|..++|++++ +|+.+.++.. ..+++ +|+
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~--------------~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~-~~~~~~~~V~ 159 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGII--------------GDNYPVPDRMLPHSEKIVHQYLIQEMCGN-KPPPGEFDLF 159 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhh--------------cCCCCCCCCCHHHHHHHHHHHHHhhccCC-CCCCCcCeEE
Confidence 56888888877754 34444333321 125887777788887777 5766654421 12344 899
Q ss_pred EecChHHHHHHHHHh-----hcCCCCeEEEcCCCCcChHHhHhhh-cCcEEEEEecCCCCC-----CcCCHHHHHHHHHH
Q 046900 125 VTAGATAANELLTFI-----LADPGDALLVPTPYYPGFDRDLRWR-TGIKIVPIHCDSSNN-----FQITPQALEAAYKE 193 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~-----l~~~gd~Vl~~~p~y~~~~~~~~~~-~G~~v~~v~~~~~~~-----~~~d~~~l~~~l~~ 193 (442)
+|+|+++++..++.+ +++|||.|++++|+|+.|...+... .|++++.++++++++ |++|++++++++.+
T Consensus 160 it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~ 239 (521)
T TIGR03801 160 AVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDP 239 (521)
T ss_pred EeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCC
Confidence 999999999999887 7899999999999999999887641 478888988875443 99999999987643
Q ss_pred HHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc--CcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEE
Q 046900 194 AESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK--NIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVH 271 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~--~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi 271 (442)
++|+++++|||||||.++|.+++++|+++|++| +++||+||+|++|.+ .+.|+.+.. ++++|
T Consensus 240 ------~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~~-------~~~vI 303 (521)
T TIGR03801 240 ------SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAEL-------PYNTI 303 (521)
T ss_pred ------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhhC-------CCCEE
Confidence 889999999999999999999999999999986 899999999999764 344554442 36899
Q ss_pred EEecCcccCCCCCceeEEEeecCHHHHH------------HH------------------------HHcc--ccCCCcHH
Q 046900 272 IVYSLSKDLGLPGFRVGTIYSYNDKVVT------------TA------------------------RRMS--SFTLISSQ 313 (442)
Q Consensus 272 ~~~S~SK~~g~~G~RiG~i~~~~~~~~~------------~~------------------------~~~~--~~~~~s~~ 313 (442)
+++||||.||++|||+||++++++.+.+ .+ ++.. ...+++++
T Consensus 304 ~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p 383 (521)
T TIGR03801 304 GVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTP 383 (521)
T ss_pred EEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcH
Confidence 9999999999999999999997553211 11 1111 12345666
Q ss_pred HHH--H---HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCe--eecCCceEEEEEecCCcccc---cC-----
Q 046900 314 TQY--L---LASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIE--CLKGNAGLFCWMNLSPLLEE---QT----- 378 (442)
Q Consensus 314 ~q~--~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~--~~~~~~g~~~~~~~~~~~~~---~~----- 378 (442)
.|. + +.+++... +.+++++++.+++|++.+.+.| |+. ..+++|+||+|++++..... ..
T Consensus 384 ~Q~q~al~a~~all~~~---~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l 457 (521)
T TIGR03801 384 QQVQMALFSLFALMDKE---NAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYL 457 (521)
T ss_pred HHHHHHHHHHHHHhccc---hhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHH
Confidence 665 3 44455432 4578889999999999999998 444 45689999999999853210 00
Q ss_pred --hhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 379 --REGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 379 --~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
..++.+++.+|++++||.+.||+.|+.. .+++|||+++++++++.++.++|++++.++..
T Consensus 458 ~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~-~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 458 KKNYSPVDVLFRLAEETGIVLLPGGGFGGP-EWSVRVSLANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred hccCCHHHHHHHHHHhCCEEEeCchhcCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0136789999999999999999999853 57899999977899999999999999987654
No 71
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-48 Score=378.26 Aligned_cols=327 Identities=20% Similarity=0.281 Sum_probs=265.6
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.++|+++ ++.+.+.+.+... ....|++ .|.++||+++|+|++ +++++|++
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~Y~~-~~~~~lr~~ia~~~~--------~~~~~I~i 87 (357)
T PRK14809 29 PDDLVKLSSNENPHGPSPAAVEAIREAAE------------RVHSYPK-ASHADLTAALADRWD--------VSPEQVWL 87 (357)
T ss_pred ccceeEecCCCCCCCCCHHHHHHHHHHHh------------hhhcCCC-CCHHHHHHHHHHHhC--------CCcceEEE
Confidence 557899999999874 3444555544321 1356875 588999999999974 68999999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++++++++||.|++++|+|+.+...+.. .|.+++.++++.+++|.+|.+.+++... ++|+++
T Consensus 88 t~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~-~g~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~k~i~ 159 (357)
T PRK14809 88 ANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARY-HHGEVREYPVSKADDFEQTADTVLDAYD-------GERIVY 159 (357)
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHH-cCCeEEEEecccCcCCCcCHHHHHHhhc-------CCcEEE
Confidence 99999999999999999999999999999988887774 8999999999766678888887776542 578999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+||||||||.++|.+++++|+++|++ +++||+||+|.++.+.+ +....... .+++++++||||.||+||+
T Consensus 160 l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~----~~~~~~~~-----~~~vi~~~SfSK~~~~~Gl 229 (357)
T PRK14809 160 LTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP----SAVALVEE-----RDDVAVLRTFSKAYGLAGL 229 (357)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc----hhHHHHhh-----CCCEEEEecchhHhcCcch
Confidence 99999999999999999999999975 78999999999987633 22222222 4789999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEE
Q 046900 286 RVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLF 365 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~ 365 (442)
|+||++++ +.+.+.+.+....+.+++++|.++..++.+. +++++.++.++++|+.+.+.|...++ +.+|+|
T Consensus 230 RiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~~~~~~~~~~~r~~l~~~L~~~~~----~~~g~f 300 (357)
T PRK14809 230 RLGYAVVP-EEWADAYARVNTPFAASELACRAGLAALDDD----EHVERTVETARWAREYIREELDAPTW----ESAGNF 300 (357)
T ss_pred hheeeecC-HHHHHHHHHhCCCCCCCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHhcCccC----CCCCCE
Confidence 99999994 5666666666666778899999998888753 45777888899999999999975422 567789
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|++++. +.++++.|.++ ||.|.||+.|+. ++++||+++. .+++++++++|+++++
T Consensus 301 ~~~~~~~---------~~~~~~~l~~~-gv~v~~g~~f~~--~~~iRls~~~--~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 301 VLAEVGD---------ASAVAEAAQER-GVIVRDCTSFGL--PECIRITCGT--REETERAVEVLNEVLA 356 (357)
T ss_pred EEEECCC---------HHHHHHHHHHC-CEEEEECccCCC--CCeEEEecCC--HHHHHHHHHHHHHHhc
Confidence 9998852 46778777554 999999999863 5799999975 6889999999998864
No 72
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.4e-48 Score=379.54 Aligned_cols=347 Identities=19% Similarity=0.347 Sum_probs=273.4
Q ss_pred hhhhhhcCCCCCCCCCCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHH
Q 046900 32 GWKAYDENPYEESTNPSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQ 110 (442)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 110 (442)
.|..+.........++.++|+|+.+++..+ .+.+.+.+.+.. ....|+++.|.++||+++++|+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~-------------~~~~Y~~~~G~~~lr~~ia~~~~~ 71 (357)
T TIGR03539 5 PWDSLAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAA-------------DAPGYPQTWGTPELREAIVDWLER 71 (357)
T ss_pred hHHHHHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHH-------------hhCCCCcccCCHHHHHHHHHHHHH
Confidence 355555444445566778899999876554 345555554332 134699999999999999999998
Q ss_pred HhCCCCc-cCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHH
Q 046900 111 IRGGRAK-FDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALE 188 (442)
Q Consensus 111 ~~~~~~~-~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~ 188 (442)
+++ +. +++++|++|+|+++++..++..+ +++||.|++++|+|+.+...++. .|++++.++ |++.+.
T Consensus 72 ~~~--~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~---------~~~~l~ 139 (357)
T TIGR03539 72 RRG--VPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALL-AGATPVAAD---------DPTELD 139 (357)
T ss_pred hcC--CCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHh-cCCEEeccC---------ChhhcC
Confidence 766 44 78999999999999999998888 79999999999999999988884 899988774 223322
Q ss_pred HHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCC
Q 046900 189 AAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSE 268 (442)
Q Consensus 189 ~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~ 268 (442)
. .+++++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.|++.. .+. +.........+
T Consensus 140 ~---------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~--~~~~~~~~~~~ 207 (357)
T TIGR03539 140 P---------VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRP-VSI--LDPRVCGGDHT 207 (357)
T ss_pred c---------cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCC-ccc--eecccCCCccc
Confidence 1 26789999999999999999999999999999999999999999998876532 221 11100000136
Q ss_pred cEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH
Q 046900 269 RVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMI 346 (442)
Q Consensus 269 ~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 346 (442)
++++++||||.||++|+|+||++++ +.+.+.+.+... .+.++.+.|.++..++.+. +++++.++.++++++++
T Consensus 208 ~vi~~~S~SK~~~~~G~R~G~~i~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~ 282 (357)
T TIGR03539 208 GLLAVHSLSKRSNLAGYRAGFVAGD-PALVAELLTVRKHAGLMVPAPVQAAMVAALGDD----GHVAEQKARYAARRAQL 282 (357)
T ss_pred cEEEEeccccccCCCceeEEEEecC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCH----HHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999984 566655554332 3567889999999999763 34677888999999999
Q ss_pred HHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHH
Q 046900 347 IEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVA 426 (442)
Q Consensus 347 ~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~ 426 (442)
.+.|++.|+.+.+|++|+|+|++++. ++.++++.|.++ ||.|.||..|+...++++||+++. ++++++++
T Consensus 283 ~~~L~~~g~~~~~p~~~~~~~~~~~~--------~~~~~~~~l~~~-gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~ 352 (357)
T TIGR03539 283 KPALEKAGFRIDHSEAGLYLWATRGE--------DAWDTVDRLAEL-GILVAPGDFYGPAGSQHVRVALTA-TDERIAAA 352 (357)
T ss_pred HHHHHHcCCCCcCCCccEEEEEECCC--------CHHHHHHHHHhC-CEEECCccccCCCCCCeEEEEecC-CHHHHHHH
Confidence 99999889888889999999999864 255677777554 999999998865556899999998 78999999
Q ss_pred HHHH
Q 046900 427 LKRI 430 (442)
Q Consensus 427 l~~l 430 (442)
+++|
T Consensus 353 ~~~l 356 (357)
T TIGR03539 353 VARL 356 (357)
T ss_pred HHhh
Confidence 9887
No 73
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4.9e-48 Score=375.71 Aligned_cols=335 Identities=18% Similarity=0.291 Sum_probs=269.3
Q ss_pred CCCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 46 NPSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
++.++|+|+.++|++++ +.+.+.+.+... ....|++. ++.+||++||++++ +++++|+
T Consensus 18 ~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~------------~~~~y~~~-~~~~lr~~ia~~~~--------~~~~~i~ 76 (356)
T PRK08056 18 SPDQLLDFSANINPLGMPVSLKRAIIDNLD------------CAERYPDV-EYRHLHQALARHHQ--------VPASWIL 76 (356)
T ss_pred ChhhEEEeccccCCCCCCHHHHHHHHHHHH------------hcccCcCc-cHHHHHHHHHHHhC--------cChhhEE
Confidence 34578999999999854 555555544321 12358764 68999999999974 6799999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++..+++++ .+|+ +++++|+|..|...++. .|++++.+|++++++|.+| +++++.+.+ ++|++
T Consensus 77 it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~~-~~~~~~~~~------~~k~v 146 (356)
T PRK08056 77 AGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYRRALQQ-VGCEIRRYSLREADGWQLT-DAILEALTP------DLDCL 146 (356)
T ss_pred ECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHHHHHHH-cCCeEEEEecccccCCCcc-HHHHHhccC------CCCEE
Confidence 9999999999999887 6776 77789999999988885 9999999999876778877 344444432 78899
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++|||||||.+++.+++++|+++|++++++||+||+|.++.+++..+.+. ... .+++++++||||.||++|
T Consensus 147 ~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~---~~~-----~~~~i~~~S~SK~~~~~G 218 (356)
T PRK08056 147 FLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ---LAD-----NPHLWVLRSLTKFYAIPG 218 (356)
T ss_pred EEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH---hcc-----CCCEEEEEechhhccCcc
Confidence 999999999999999999999999999999999999999987654322222 222 368999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCce
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAG 363 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g 363 (442)
+|+||++++++.+.+.+++....+.++.+.|.++..++.+.. +.++.++.++++|+++.+.|++. ++.+.++ ++
T Consensus 219 ~RiG~~v~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~ 293 (356)
T PRK08056 219 LRLGYLVNSDDAAVARMRRQQMPWSINAFAALAGEVILQDRA----YQQATWQWLAEEGARFYQALCALPLLTVWPG-RA 293 (356)
T ss_pred hhheeeecCCHHHHHHHHHhCCCCchhHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CC
Confidence 999999986666666676656667788899999988887544 46777889999999999999887 7776655 56
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|+|++++. +..++++.|+++ ||.|+||+.|....++|+||+++. .++.+.+++.|+++++
T Consensus 294 ~~~~~~~~~--------~~~~~~~~l~~~-gI~v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 294 NYLFLRCER--------PDIDLQRALLTQ-RILIRSCANYPGLDSRYYRVAIRS--AAENERLLAALRNVLT 354 (356)
T ss_pred cEEEEEcCC--------ChHHHHHHHHHC-CeEEEECCCCCCCCCCEEEEEEcC--HHHHHHHHHHHHHHHc
Confidence 799999874 145788888765 999999999965556799999985 6778999999887754
No 74
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.5e-48 Score=376.32 Aligned_cols=341 Identities=19% Similarity=0.268 Sum_probs=268.4
Q ss_pred ceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 49 GVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 49 ~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
.+++|+.++|++++ +.+.+.+.+..... .....|++ .|.++||++||+|+++.++.++.+++++|++|+
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~ 98 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQG---------IESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGN 98 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhc---------ccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcC
Confidence 47899999998753 55565555432110 01246865 699999999999999876544668999999999
Q ss_pred ChHHHHHHHHHhhcCCCC-eEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 128 GATAANELLTFILADPGD-ALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~gd-~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
|+++++..++.+++.+|| .|++++|+|+.|...++. .|++++.+++++ ++|.+|+++|++.+++.. ..++|++++
T Consensus 99 Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~-~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~--~~~~k~i~l 174 (374)
T PRK02610 99 GSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQT-LGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQ--NPPVRVVFV 174 (374)
T ss_pred ChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHH-cCCEEEEecCCc-ccCCCCHHHHHHHHHhhc--CCCceEEEE
Confidence 999999988888877886 899999999999999985 999999999864 358899999999886421 137899999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
||||||||.+++.+++++++++| ++++||+||+|.+|.+. .++..+.. .+++|+++||||.||+||+|
T Consensus 175 ~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~----~~~~~~~~------~~~~ivi~SfSK~~g~~GlR 242 (374)
T PRK02610 175 VHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT----TLVGELAQ------HPNWVILRTFSKAFRLAAHR 242 (374)
T ss_pred eCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCcc----chHHHHhc------CCCEEEEEecchhccCcccc
Confidence 99999999999999999999977 48999999999987532 12222322 36789999999999999999
Q ss_pred eEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEE
Q 046900 287 VGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLF 365 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~ 365 (442)
+||+++ ++.+.+.+.+....+.++.++|.++..++++. +.+++.+++.++ +|+.+.+.|+++ ++.+ .|.+|+|
T Consensus 243 iG~~v~-~~~l~~~l~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~-~r~~l~~~L~~~~~~~~-~p~~g~f 316 (374)
T PRK02610 243 VGYAIG-HPELIAVLEKVRLPYNLPSFSQLAAQLALEHR---QELLAAIPEILQ-ERDRLYQALQELPQLRV-WPSAANF 316 (374)
T ss_pred eeeeec-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHH-HHHHHHHHHHhCCCcEe-CCCcceE
Confidence 999998 56677777766656778999999999998864 345555555554 477788899876 6665 4778899
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+|++++... ++.++++.|.++ ||.|.++ ++++||+++. .+++++++++|++++.++
T Consensus 317 ~~~~l~~~~------~~~~~~~~l~~~-gi~v~~~-------~~~lRls~~~--~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 317 LYLRLSQDA------ALAALHQALKAQ-GTLVRHT-------GGGLRITIGT--PEENQRTLERLQAALTQL 372 (374)
T ss_pred EEEeCCCCC------CHHHHHHHHHHC-CEEEEeC-------CCeEEEeCCC--HHHHHHHHHHHHHHHhhc
Confidence 999998632 257788887555 9999863 4689999986 467899999999998754
No 75
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.7e-48 Score=370.55 Aligned_cols=315 Identities=15% Similarity=0.250 Sum_probs=253.5
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecC
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAG 128 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G 128 (442)
.+|+|+.|+|+++. . .....||++ -..+||+++|+|++ +++++|++|+|
T Consensus 17 ~~i~l~~Nenp~~~----------~------------~~~~~Yp~~-~~~~lr~~ia~~~~--------~~~~~I~it~G 65 (332)
T PRK06425 17 RIIDFSANINDFMD----------I------------GDISIYPEI-SYTDIEDQIKIYTQ--------GLKIKVLIGPG 65 (332)
T ss_pred CEEEeccccCCCcC----------h------------hhcccCcCc-CHHHHHHHHHHHhC--------CCcceEEECCC
Confidence 57999999999841 0 124569876 46999999999986 67999999999
Q ss_pred hHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeC
Q 046900 129 ATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITN 208 (442)
Q Consensus 129 ~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~ 208 (442)
+++++.+++. ++++|+ |++++|+|+.|...++. .|++++.+|++. +.+|.+.+++ .++|++++||
T Consensus 66 s~~~l~~~~~-~~~~~~-vv~~~P~y~~y~~~~~~-~G~~v~~vp~~~---~~~~~~~l~~---------~~~k~v~l~n 130 (332)
T PRK06425 66 LTHFIYRLLS-YINVGN-IIIVEPNFNEYKGYAFT-HGIRISALPFNL---INNNPEILNN---------YNFDLIFIVS 130 (332)
T ss_pred HHHHHHHHHH-HhCCCc-EEEeCCChHHHHHHHHH-cCCeEEEEeCCc---ccCcHHHHhh---------cCCCEEEEeC
Confidence 9999999997 457765 66779999999999995 999999999874 3356554432 1778999999
Q ss_pred CCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeE
Q 046900 209 PSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVG 288 (442)
Q Consensus 209 P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG 288 (442)
||||||.+++.+++++|+++|++++++||+||+|.++.+++. .+...+... .++||+++||||.||+||+|+|
T Consensus 131 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~--~~~~~~~~~-----~~~vi~~~SfSK~~~l~GlRiG 203 (332)
T PRK06425 131 PDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA--EEDVLLNRS-----YGNVIIGRSLTKILGIPSLRIG 203 (332)
T ss_pred CCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc--hhHHHHhcc-----CCCEEEEeecHHhcCCchhhhe
Confidence 999999999999999999999999999999999999886542 244444432 4789999999999999999999
Q ss_pred EEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEE
Q 046900 289 TIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWM 368 (442)
Q Consensus 289 ~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~ 368 (442)
|+++ ++.+.+.+.+....+.++.+++.+ +..... +.++++.++.++++|+++.+.|++.|+.+..+.+|+|+|+
T Consensus 204 y~v~-~~~li~~l~~~~~~~~~~~~~~~~----l~~~~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~~~ 277 (332)
T PRK06425 204 YIAT-DDYNMKISRKITEPWSVCDPAIDF----IRSIDL-DYVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFITF 277 (332)
T ss_pred eeec-CHHHHHHHHHcCCCCccCHHHHHH----HHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEEEE
Confidence 9999 466777777766666566554433 322222 4567788999999999999999998888765556779999
Q ss_pred ecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 369 NLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 369 ~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+++. +.++++.|+++ ||.|+||+.|+..+++|+||+++. .++++++++.|++++
T Consensus 278 ~~~~---------~~~~~~~l~~~-gi~v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~~ 331 (332)
T PRK06425 278 MIPD---------AHDFYSYLLKN-GILVRLLDDYECLGEQYIRIAIRR--RSFNIKLVNALRNFL 331 (332)
T ss_pred EcCC---------HHHHHHHHHHC-CeEEEECCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence 9862 56888888876 999999999965556899999996 678999999998765
No 76
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-48 Score=376.67 Aligned_cols=334 Identities=18% Similarity=0.268 Sum_probs=272.6
Q ss_pred CCceeeeecccccc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.++|++ +++.+.+.+.+.. ....+|++..| .+||+++|++++ +++++|++
T Consensus 35 ~~~~i~l~~~~~~~~~~~~~~~al~~~~------------~~~~~Y~~~~g-~~lr~~ia~~~~--------~~~~~i~~ 93 (371)
T PRK05166 35 VPRIAKLGSNENPLGPSPAVRRAFADIA------------ELLRLYPDPQG-RALREAIAARTG--------VPADRIIL 93 (371)
T ss_pred CcceEEcCCCCCCCCCCHHHHHHHHHHH------------HHhhcCCCCcH-HHHHHHHHHHhC--------cCHHHEEE
Confidence 45789999999986 4455666555432 12457999888 599999999874 57899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++.+++++||.|+++.|+|+.+...++. .|++++.++++. ++.+|++++++.+++ ++++++
T Consensus 94 t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~-~g~~~~~v~~~~--~~~~~~~~l~~~~~~------~~~~v~ 164 (371)
T PRK05166 94 GNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTM-MGARVERVTVTP--DLGFDLDALCAAVAR------APRMLM 164 (371)
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHH-cCCeEEEeecCC--CCCCCHHHHHHhhhc------CCCEEE
Confidence 99999999999999999999999999999999888884 899999999875 357899999998865 678999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
++|||||||.+++.+++++|+++|++ +++||+||+|.++.+++ ...+......+ ..+++|+++||||.||++|+
T Consensus 165 l~~p~NPtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~-~~~~~~~~~~~----~~~~vi~i~SfSK~~~l~Gl 238 (371)
T PRK05166 165 FSNPSNPVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGD-DYPSALTLLKA----RGLPWIVLRTFSKAYGLAGL 238 (371)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCc-CcccHHHHHhh----cCCCEEEEeechHhhhcchh
Confidence 99999999999999999999999864 88999999999988644 33344444332 13689999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEE
Q 046900 286 RVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLF 365 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~ 365 (442)
|+||++++++.+.+.+.+....+.++.++|.++.+++.+.+ ++++.++.++++|+.+.+.|++.|+.+. +.+|+|
T Consensus 239 RiG~~i~~~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~g~~~~-p~~g~f 313 (371)
T PRK05166 239 RVGYGLVSDPELVGLLDRVRTPFNVNGAAQAAALAALDDEE----HLAKGVALALAERERLKKELAEMGYRIA-PSRANF 313 (371)
T ss_pred heeeeecCCHHHHHHHHHhccCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHCcCeeC-CCcCCE
Confidence 99998876778887777666667789999988888887644 4677778899999999999998888764 556789
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+|++++. ++.++++.|+++ ||.+.||..++ .++|+||+++. .++.+++++.|+.++
T Consensus 314 l~~~~~~--------~~~~l~~~l~~~-gi~v~p~~~~~--~~~~iRi~~~~--~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 314 LFFDARR--------PASAVAEALLRQ-GVIVKPWKQPG--FETFIRVSIGS--PEENDHFVAALDKVL 369 (371)
T ss_pred EEEeCCC--------CHHHHHHHHHHC-CeEEecCCCCC--CCCeEEEEcCC--HHHHHHHHHHHHHHh
Confidence 9999764 256888888876 99999997654 36899999996 556777777776654
No 77
>PLN02368 alanine transaminase
Probab=100.00 E-value=6.7e-48 Score=377.42 Aligned_cols=282 Identities=24% Similarity=0.371 Sum_probs=236.2
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc-CCCCeEEEcCCCCcChHHhHhhhcC
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA-DPGDALLVPTPYYPGFDRDLRWRTG 166 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~~G 166 (442)
..+|++..|.++||++||+|+.+++| +.+++++|++|+|+++++..++.+++ ++||.|++++|+|+.|...+.. .|
T Consensus 100 ~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~-~g 176 (407)
T PLN02368 100 LGAYSDSRGLPGVRKEVAEFIERRDG--YPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISL-LG 176 (407)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHH-cC
Confidence 46799999999999999999998766 55789999999999999999999987 7999999999999999999985 99
Q ss_pred cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 167 ~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
++++.++++++++|.+|++.|++.+++...++.++|+++++|||||||.+++.+++++|+++|++|+++||+||+|.++.
T Consensus 177 ~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~ 256 (407)
T PLN02368 177 GTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNI 256 (407)
T ss_pred CEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 99999999887789999999999997543334478999999999999999999999999999999999999999999999
Q ss_pred CCCC-CcccHHHHHhhhc--CCCCCcEEEEecCcccC-CCCCceeEEEee--cCHHHHHHHHHcc-ccCCCcHHHHHHHH
Q 046900 247 FSSS-EFVSIAEILEARQ--YKDSERVHIVYSLSKDL-GLPGFRVGTIYS--YNDKVVTTARRMS-SFTLISSQTQYLLA 319 (442)
Q Consensus 247 ~~~~-~~~s~~~~~~~~~--~~~~~~vi~~~S~SK~~-g~~G~RiG~i~~--~~~~~~~~~~~~~-~~~~~s~~~q~~~~ 319 (442)
|++. .+.|+.++..++. ....+++|+++||||.| |+||||+||+++ .++.+.+.+.+.. ..+.+++++|.++.
T Consensus 257 y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~~~Q~aa~ 336 (407)
T PLN02368 257 YQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNVSGQIFMG 336 (407)
T ss_pred cCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCcHHHHHHH
Confidence 9764 4667666532210 00135899999999998 899999999984 2455666655543 34667889999999
Q ss_pred HHhcCch----hH---HHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCC
Q 046900 320 SMLSNKK----FT---ENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSP 372 (442)
Q Consensus 320 ~~l~~~~----~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~ 372 (442)
+++.... .. .++++++++.|++||+.+.+.|++. |+.+..|+|+||+|++++-
T Consensus 337 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~l 397 (407)
T PLN02368 337 LMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIKL 397 (407)
T ss_pred HHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCCC
Confidence 9997531 11 2334567899999999999999987 9999999999999987654
No 78
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=1.3e-47 Score=373.39 Aligned_cols=334 Identities=19% Similarity=0.233 Sum_probs=258.7
Q ss_pred CCCCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcE
Q 046900 45 TNPSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRI 123 (442)
Q Consensus 45 ~~~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i 123 (442)
..+.++|+|+.++|++++ +.+.+.+.+... ....|+++ +..+||++||+|++ +++++|
T Consensus 19 ~~~~~~i~l~~~~n~~~~~~~~~~a~~~~~~------------~~~~Y~~~-~~~~Lr~aia~~~~--------v~~~~I 77 (360)
T PRK07392 19 CPPDAILDFSASINPLGPPESVIAAIQSALS------------ALRHYPDP-DYRELRLALAQHHQ--------LPPEWI 77 (360)
T ss_pred CCcccEEEeCCcCCCCCCCHHHHHHHHHHHH------------HhhcCCCc-CHHHHHHHHHHHhC--------cChhhE
Confidence 335578999999998753 555555544321 24568876 46899999999983 689999
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCC---cCCHHHHHHHHHHHHhcCCc
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNF---QITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~---~~d~~~l~~~l~~~~~~~~~ 200 (442)
++|+|+++++.+++.++. +||.|++++|+|+.|...++. .|++++.++++.++++ ..+++.+++.. .+
T Consensus 78 ~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------~~ 148 (360)
T PRK07392 78 LPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRRALRA-FGATVKELPLPLDQPSPGLTLRLQTLPPQL-------TP 148 (360)
T ss_pred EECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHHHHHH-cCCeEEEEecccccCCcccccCHHHHHHhc-------cC
Confidence 999999999999998875 689999999999999999995 9999999999876655 34455554432 26
Q ss_pred eeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccC
Q 046900 201 VRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDL 280 (442)
Q Consensus 201 ~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~ 280 (442)
+++++++|||||||.+++.+++.++ ++++++ +|+||+|.+|.+++. ..++...... .+++++++||||.|
T Consensus 149 ~~~~~l~nP~NPTG~~~~~~~l~~l---~~~~~~-~IiDE~y~~~~~~~~-~~s~~~~~~~-----~~~vi~i~S~SK~~ 218 (360)
T PRK07392 149 NDGLLLNNPHNPTGKLWSREAILPL---LEQFAL-VVVDEAFMDFLPPDA-EQSLIPCLAE-----YPNLIILRSLTKFY 218 (360)
T ss_pred CCEEEEeCCCCCCCCCcCHHHHHHH---HHHCCE-EEEECchhhhccCcc-ccchHHHhhc-----CCCEEEEEechhhh
Confidence 7899999999999999997766555 557775 666999999887653 3344443332 47899999999999
Q ss_pred CCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec
Q 046900 281 GLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK 359 (442)
Q Consensus 281 g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 359 (442)
|+||+|+||++++ +.+.+.+.+....+.++.++|.++.+++++..+ .++.++.++++|+.+.+.|++. |+.+.+
T Consensus 219 ~l~GlRiG~~v~~-~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 293 (360)
T PRK07392 219 SLPGLRLGYAIAH-PDRLQRWQQWRDPWPVNGLAAAAAIAALADRDF----QQQTWAWLPPAREALFQGLASLPGLTPLP 293 (360)
T ss_pred cCCchheeeeeCC-HHHHHHHHhhCCCCCCCHHHHHHHHHHhccHHH----HHHHHHHHHHHHHHHHHHHHhCCCcEECC
Confidence 9999999999995 555566666666678899999999999987544 4556677899999999999876 777654
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
.+++|+|++++. ++.+++..+++++||.|.||..|+..+++|+||+++. .++.+++.+.|.+++
T Consensus 294 -~~~~fl~~~~~~--------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~~ 357 (360)
T PRK07392 294 -SAANFLLVQSQG--------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAIL 357 (360)
T ss_pred -CCCCEEEEEcCC--------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence 778899999864 2568888887777999999999975556899999986 333455555555444
No 79
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.2e-47 Score=371.56 Aligned_cols=345 Identities=25% Similarity=0.407 Sum_probs=280.3
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++++|+.+.+.++ ++.+.+.+.+..... ......|++..|++++|+++++|+++.++ ..+++++|++|
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~--------~~~~~~y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~~i~~t 102 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEE--------DPGLHGYMPNAGYPEVREAIAESLNRRFG--TPLTADHIVMT 102 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcC--------CcCcccCCCCCCCHHHHHHHHHHHHHHhC--CCCCcCcEEEe
Confidence 46789998876543 455666554432110 01245798889999999999999998766 45789999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++..++.+++++||.|++++|+|..+...++. .|++++.++++++ +|.+|++++++.+++ +++++++
T Consensus 103 ~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~-~g~~v~~v~~~~~-~~~~d~~~l~~~~~~------~~~~v~~ 174 (394)
T PRK06836 103 CGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDN-HGGKLVVVPTDTD-TFQPDLDALEAAITP------KTKAVII 174 (394)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHH-cCCEEEEEecCCc-cCcCCHHHHHhhcCc------CceEEEE
Confidence 9999999999999999999999999999999988884 8999999999764 478999999998864 7899999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHh------cCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccC
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATR------KNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDL 280 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~------~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~ 280 (442)
++|+||||.++|.+++++|+++|++ |+++||+||+|.++.+++....++.+. .+++++++||||.|
T Consensus 175 ~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~--------~~~~i~~~S~SK~~ 246 (394)
T PRK06836 175 NSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKY--------YDNSIVVYSFSKSL 246 (394)
T ss_pred eCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHc--------cCcEEEEecchhhc
Confidence 9999999999999999999999998 899999999999998876444444322 36899999999999
Q ss_pred CCCCceeEEEeecCHHHHHH---H---HHcc---ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046900 281 GLPGFRVGTIYSYNDKVVTT---A---RRMS---SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLR 351 (442)
Q Consensus 281 g~~G~RiG~i~~~~~~~~~~---~---~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 351 (442)
|+||+|+||+++++ .+.+. . .... ..+.++++.|.++..++.+.. .++.++++++.+.+.|+
T Consensus 247 ~~pGlRiG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--------~~~~~~~~r~~l~~~L~ 317 (394)
T PRK06836 247 SLPGERIGYIAVNP-EMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV--------DVSIYKRNRDLLYDGLT 317 (394)
T ss_pred cCcceeeEEEecCH-HHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH--------HHHHHHHHHHHHHHHHH
Confidence 99999999999954 33221 1 1111 224567889999999988631 24567888999999999
Q ss_pred hCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHH
Q 046900 352 SAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIH 431 (442)
Q Consensus 352 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~ 431 (442)
+.|+.+..+.+|+|+|++++.. ++.++++.|.+ +||.|.||+.|+. ++++||+++. +++++++++++|+
T Consensus 318 ~~g~~~~~~~gg~~~~~~~~~~-------~~~~~~~~l~~-~gv~v~~g~~f~~--~~~iRi~~~~-~~~~~~~~i~~l~ 386 (394)
T PRK06836 318 ELGFECVKPQGAFYLFPKSPEE-------DDVAFCEKAKK-HNLLLVPGSGFGC--PGYFRLSYCV-DTETIERSLPAFE 386 (394)
T ss_pred hCCCEeecCCceEEEEEeCCCC-------CHHHHHHHHHh-CCEEEECchhcCC--CCeEEEEecC-CHHHHHHHHHHHH
Confidence 9999999999999999988752 25677766655 5999999999863 5799999995 8999999999999
Q ss_pred HHHHHHH
Q 046900 432 NFMQKRE 438 (442)
Q Consensus 432 ~~l~~~~ 438 (442)
++++++.
T Consensus 387 ~~l~~~~ 393 (394)
T PRK06836 387 KLAKEYK 393 (394)
T ss_pred HHHHHhc
Confidence 9998764
No 80
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-47 Score=373.56 Aligned_cols=328 Identities=16% Similarity=0.246 Sum_probs=268.6
Q ss_pred ceeeeecccccc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 49 GVIQMGLAENQV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 49 ~~i~l~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
++|+|++++|++ +++.+.+.+.+... . ..|.+..|.+++|+++|+|++ +++++|++|+
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~------------~-~~~~p~~g~~~lr~~ia~~~~--------~~~~~i~~t~ 88 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLD------------E-LALYPDGYAPELRTKVAKHLG--------VDEEQLLFGA 88 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHH------------H-hhcCCCCcHHHHHHHHHHHhC--------CCHHHEEECC
Confidence 679999999988 44556665554321 1 233345689999999999984 6789999999
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe
Q 046900 128 GATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT 207 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~ 207 (442)
|+++++..++.+++++||.|++++|+|+.+...+.. .|++++.+|++ ++.+|++.+++.+.+ ++++++++
T Consensus 89 G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~-~g~~~~~~~~~---~~~~d~~~l~~~~~~------~~~~v~i~ 158 (359)
T PRK03158 89 GLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAII-EGAEVREVPLK---DGGHDLEAMLKAIDE------QTKIVWIC 158 (359)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHH-cCCeEEEEecC---CCCcCHHHHHHhcCC------CCCEEEEe
Confidence 999999999999999999999999999999988884 89999999986 346899999887754 78899999
Q ss_pred CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee
Q 046900 208 NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV 287 (442)
Q Consensus 208 ~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri 287 (442)
|||||||.+++.+++.++++.|+ ++++||+||+|.++.+++... +....... .+++++++||||.||++|+|+
T Consensus 159 ~p~NPtG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~-~~~~~~~~-----~~~vi~~~S~SK~~g~~GlRi 231 (359)
T PRK03158 159 NPNNPTGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYP-DTLPLLEK-----YENLIVLRTFSKAYGLAALRV 231 (359)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccc-cHHHHHHh-----cCCEEEEEechHhhcCcchhh
Confidence 99999999999999999998874 699999999999988754322 22233222 478999999999999999999
Q ss_pred EEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEE
Q 046900 288 GTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCW 367 (442)
Q Consensus 288 G~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~ 367 (442)
||+++ ++.+.+.+......+.+++++|.++.+++++.+ ++++.++.++++++.+.+.|++.|+.+.++ +|+|+|
T Consensus 232 G~~v~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~i~ 305 (359)
T PRK03158 232 GYGIA-SEELIEKLNIARPPFNTTRIAQYAAIAALEDQA----FLKECVEKNAEGLEQYYAFCKEYGLFYYPS-QTNFIF 305 (359)
T ss_pred ehhcC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHCCCeeCCC-cCcEEE
Confidence 99999 566667776666667789999999999998654 456677778889999999998888877654 567999
Q ss_pred EecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 368 MNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 368 ~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
++++. ++.++++.|+++ ||.+.||+.|+ .++++||+++. .+++++++++|+++
T Consensus 306 ~~~~~--------~~~~~~~~l~~~-gv~v~~g~~f~--~~~~iRi~~~~--~~~~~~l~~al~~~ 358 (359)
T PRK03158 306 VDTGR--------DANELFEALLKK-GYIVRSGAALG--FPTGVRITIGL--KEQNDKIIELLKEL 358 (359)
T ss_pred EECCC--------CHHHHHHHHHHC-CeEEeeCCCCC--CCCeEEEecCC--HHHHHHHHHHHHHh
Confidence 98853 256888888775 99999999986 35799999985 77899999999875
No 81
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-46 Score=369.69 Aligned_cols=344 Identities=18% Similarity=0.214 Sum_probs=268.4
Q ss_pred ccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCc-cCCCcEEEecChHHHHHHHHH
Q 046900 60 VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK-FDLNRIVVTAGATAANELLTF 138 (442)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~~~i~~t~G~~~ai~~~~~ 138 (442)
...+.+.+.+.+... ....+|+++.|.++||+++++++.+..+ ... .+.++|++|+|+++++.+++.
T Consensus 20 ~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~al~~~~~ 87 (388)
T PRK08637 20 MYLSSLQDLLNDLTP-----------DEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVAD 87 (388)
T ss_pred chHHHHHHHHHhhcc-----------ccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHHHHHHHH
Confidence 445666665554321 2356899999999999999999876532 111 123689999999999999999
Q ss_pred hhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC
Q 046900 139 ILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ 218 (442)
Q Consensus 139 ~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~ 218 (442)
+++++||.|++++|+|+.|...+....|++++.+|+..+ ++++|++.+++.++... ....++++++|||||||.+++
T Consensus 88 ~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~-~~~~d~~~l~~~~~~~~--~~~~~~~~~~~P~NPTG~~~s 164 (388)
T PRK08637 88 LFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGFDTDALKEALQAAY--NKGKVIVILNFPNNPTGYTPT 164 (388)
T ss_pred HhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCC-CCcCCHHHHHHHHHhhc--cCCCEEEEEeCCCCCCCCCCC
Confidence 999999999999999999998754237999999998422 24589999999887211 114456788899999999999
Q ss_pred HHHHHHHHHHHHh-----cCcEEEEeccCCcCCCCCCCcccHHH-HHhhhcCCCCCcEE--EEecCcccCCCCCceeEEE
Q 046900 219 RSVLEELLDFATR-----KNIHLVSDEIYSGSAFSSSEFVSIAE-ILEARQYKDSERVH--IVYSLSKDLGLPGFRVGTI 290 (442)
Q Consensus 219 ~~~l~~l~~~~~~-----~~~~vi~De~y~~~~~~~~~~~s~~~-~~~~~~~~~~~~vi--~~~S~SK~~g~~G~RiG~i 290 (442)
.+++++|+++|++ |+++||+||+|.++.|++....++.. +... .++++ +++|+||.|++||+|+||+
T Consensus 165 ~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~-----~~~vi~i~~~s~SK~~~~pGlRlG~~ 239 (388)
T PRK08637 165 EKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANL-----HSNILAVKLDGATKEEFVWGFRVGFI 239 (388)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcc-----cccceEEEeccccccCCCcccceEEE
Confidence 9999999998875 89999999999999987755445432 2221 35654 4569999999999999999
Q ss_pred eecC-----HHHHHHHHHc------cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC----CC
Q 046900 291 YSYN-----DKVVTTARRM------SSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA----GI 355 (442)
Q Consensus 291 ~~~~-----~~~~~~~~~~------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~ 355 (442)
++++ +.+.+.+.+. ...+.+|.+.|.++..++.++.+ .+++++.+..++++++.+.+.|++. ++
T Consensus 240 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~ 318 (388)
T PRK08637 240 TFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEF-DKEKQEKFQILKERYEKTKEVLYDGKYDDAW 318 (388)
T ss_pred EEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 9753 5565555421 12356789999999999988765 5677788888999999999999765 57
Q ss_pred eeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 356 ECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 356 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
.+.+|++|+|+|++++.. ++.++++.|++++||.+.+. .++++||+++..+++++++++++|+++++
T Consensus 319 ~~~~~~~g~~~~~~l~~~-------~~~~l~~~l~~~~gv~~~~~------~~~~iRi~~~~~~~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 319 QAYPFNSGYFMCLKLKGV-------DAEELRVHLLEKYGIGTIAL------NETDLRIAFSCVEEEDIPELFDSIYKAIK 385 (388)
T ss_pred ccccccceEEEEecCChH-------HHHHHHHHHhhhcceEEEec------cCCceEEEeecCCHHHHHHHHHHHHHHHH
Confidence 788899999999999731 36788899887779988742 25789999997789999999999999997
Q ss_pred HH
Q 046900 436 KR 437 (442)
Q Consensus 436 ~~ 437 (442)
++
T Consensus 386 ~~ 387 (388)
T PRK08637 386 DL 387 (388)
T ss_pred hc
Confidence 64
No 82
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-46 Score=366.07 Aligned_cols=327 Identities=18% Similarity=0.255 Sum_probs=264.0
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecC
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAG 128 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G 128 (442)
+.++++.++|+++.+.. .. .....|+++. ..+||+++|+|++ +++++|++|+|
T Consensus 32 ~~~~~~~ne~~~~~~~~-----~~-------------~~~~~Y~~~~-~~~lr~~ia~~~~--------~~~~~I~~t~G 84 (364)
T PRK04781 32 GDVWLNANESAWANPAD-----PD-------------ASTRRYPDPQ-PPGLRSALAALYG--------CAPEQLLIGRG 84 (364)
T ss_pred CCEEeeCCCCCCCCChh-----hc-------------chhccCCCCC-HHHHHHHHHHHhC--------cChHHEEEeCC
Confidence 56899999998854311 00 1245788774 6999999999975 67999999999
Q ss_pred hHHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEecCC-CCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 129 ATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS-SNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 129 ~~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~-~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+++++.+++.+++.+| |.|++++|+|..|...++. .|++++.+|++. +++|.+|++++.+.+.+ .+++++++
T Consensus 85 ~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-----~~~~lv~l 158 (364)
T PRK04781 85 SDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARL-QNAPLVEVPLVDGADGFHADVPAIVAAALA-----SNAKLVFL 158 (364)
T ss_pred HHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHH-cCCEEEEEecCCCccCCCcCHHHHHHHHhc-----cCCeEEEE
Confidence 9999999999999999 7999999999999888774 899999999853 45788899988765532 27899999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
+|||||||.+++.+++++++++|+ ++++||+||+|.+|.+.. +...+... .+++|+++||||+||+||+|
T Consensus 159 ~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~----~~~~~~~~-----~~~vi~~~SfSK~~gl~GlR 228 (364)
T PRK04781 159 CSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDVP----SAVGLLAR-----YDNLAVLRTLSKAHALAAAR 228 (364)
T ss_pred cCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCCc----chHHHHhh-----CCCEEEEecChhhcccccce
Confidence 999999999999999999999986 478999999999987532 23333332 47899999999999999999
Q ss_pred eEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEE
Q 046900 287 VGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLF 365 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~ 365 (442)
+||+++ ++.+.+.+.+....+.++++.|.++..++.++.+ . +..+..+.++++|+.+.+.|+++ |+....|.+|+|
T Consensus 229 vGy~v~-~~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~-~-~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f 305 (364)
T PRK04781 229 IGSLIA-NAELIAVLRRCQAPYPVPTPCAALAEQALSAPAL-A-VTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNF 305 (364)
T ss_pred eeeeeC-CHHHHHHHHhccCCCCCCHHHHHHHHHHHhcccH-H-HHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcE
Confidence 999998 5677788887777788899999999999987643 2 33445557899999999999887 665445677889
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+|++++. ..++.+.|.++ ||.|+||..|+. .++|+||+++. .++++++++.|+++.
T Consensus 306 ~~~~~~~---------~~~~~~~l~~~-gI~v~~~~~~~~-~~~~~Ris~~~--~~~~~~l~~al~~~~ 361 (364)
T PRK04781 306 LLVRFDD---------AEAAFQALLAA-GVVVRDQRAAPR-LSDALRITLGT--PEQNDRVLAALQRTQ 361 (364)
T ss_pred EEEEcCC---------HHHHHHHHHHC-CeEEeeCCCCCC-CCCeEEEeCCC--HHHHHHHHHHHHHHH
Confidence 9999863 45677777655 999999987753 46799999986 677888888888754
No 83
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-46 Score=367.49 Aligned_cols=328 Identities=19% Similarity=0.250 Sum_probs=264.6
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.|+|+++ ++.+.+.+.... ....|+++ +..+||+++|+|++ +++++|++
T Consensus 51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~~-------------~~~~Yp~~-~~~~lr~~ia~~~~--------~~~~~I~~ 108 (380)
T PLN03026 51 PEDIVKLDANENPYGPPPEVLEALGNMK-------------FPYVYPDP-ESRRLRAALAEDSG--------LESENILV 108 (380)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHhhH-------------hhccCCCC-CHHHHHHHHHHHhC--------cChhhEEE
Confidence 458899999999874 355555554321 12458765 68999999999985 67899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++.+++++||.|++++|+|+.|...++. .|++++.+++++ +|.+|++.|++.+.. .++++++
T Consensus 109 t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~~~~~-----~~~~~v~ 180 (380)
T PLN03026 109 GCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAV-NGAEVIKVPRTP--DFSLDVPRIVEAVET-----HKPKLLF 180 (380)
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHH-cCCEEEEeecCC--CCCcCHHHHHHHHhc-----cCCcEEE
Confidence 99999999999999999999999999999999888884 899999999853 578999999998832 2789999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+||||||||.+++.+++++|++.+ ++||+||+|.+|.+.+ +....... .+++++++||||.||++|+
T Consensus 181 l~~P~NPTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~----~~~~~~~~-----~~~viv~~SfSK~~glaGl 247 (380)
T PLN03026 181 LTSPNNPDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQE----SRMKWVKK-----YDNLIVLRTFSKRAGLAGL 247 (380)
T ss_pred EeCCCCCCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc----chHHHHHh-----CCCEEEEecchHhhcCccc
Confidence 999999999999999999888753 8999999999987543 22222222 4889999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEE
Q 046900 286 RVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLF 365 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~ 365 (442)
|+||+++ ++.+.+.+.+....+.++.++|.++.++|.+.+ ++++.++.++++|+++.+.|++++.....|.+++|
T Consensus 248 RiGy~~~-~~~~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~----~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f 322 (380)
T PLN03026 248 RVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALSNPK----YLEDVKNALVEERERLFGLLKEVPFLEPYPSDANF 322 (380)
T ss_pred cceeeec-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhhCHH----HHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeE
Confidence 9999999 556667777766677889999999999997644 46778889999999999999988533335677889
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
+|++++... ++.++++.|+++ ||.|++|+.+ ..++|+|||++. .++++++++.|+++
T Consensus 323 ~~~~~~~~~------~~~~~~~~l~~~-gI~v~~~~~~--~~~~~lRis~~~--~~~~~~l~~al~~~ 379 (380)
T PLN03026 323 ILCRVTSGR------DAKKLKEDLAKM-GVMVRHYNSK--ELKGYIRVSVGK--PEHTDALMEALKQL 379 (380)
T ss_pred EEEECCCCC------CHHHHHHHHHHC-CeEEEECCCC--CCCCEEEEecCC--HHHHHHHHHHHHHh
Confidence 999987522 256788888865 9999998763 246799999985 56788888877653
No 84
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-46 Score=365.77 Aligned_cols=338 Identities=20% Similarity=0.262 Sum_probs=272.9
Q ss_pred ceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 49 GVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 49 ~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
..|+|+.++|++++ +.+.+.+.+..... ......|++ .|.+.||+++|+|+++.++ .++++++|++|+
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~--------~~~~~~Y~~-~g~~~lr~aia~~~~~~~~--~~~~~~~I~it~ 95 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEA--------AAGLNRYPD-RDAVALRADLAAYLTAQTG--VGLTVENVWAAN 95 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhh--------hhhhccCCC-CchHHHHHHHHHHhhhhcc--CCCChhhEEECC
Confidence 45899999999853 55666665442110 012457876 4889999999999998776 457899999999
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe
Q 046900 128 GATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT 207 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~ 207 (442)
|+++++.+++.+++++||.|+++.|+|+.|...+.. .|.+++.++.+ ++|.+|++.+++++.+ .++++++++
T Consensus 96 G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~-~g~~~~~~~~~--~~~~~d~~~l~~~~~~-----~~~~~i~l~ 167 (368)
T PRK03317 96 GSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARG-THTEWVEGPRA--ADFTLDVDAAVAAIAE-----HRPDVVFLT 167 (368)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHh-cCCeeEEcccC--CCCCCCHHHHHHHHhc-----cCCCEEEEe
Confidence 999999999999999999999999999999998884 89999888764 3578999999998864 267889999
Q ss_pred CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee
Q 046900 208 NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV 287 (442)
Q Consensus 208 ~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri 287 (442)
||+||||.+++.+++++|+++| +++||+||+|.++.+++. .+...+... .+++++++||||.||++|+|+
T Consensus 168 ~p~NPtG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~--~~~~~~~~~-----~~~~i~~~SfSK~~g~~GlRi 237 (368)
T PRK03317 168 SPNNPTGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGT--PSALTLLPE-----YPRLVVSRTMSKAFAFAGGRL 237 (368)
T ss_pred CCCCCCCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCC--cCHHHHHHh-----CCCEEEEEechhhhccchhhh
Confidence 9999999999999999998877 689999999999876553 244444332 368999999999999999999
Q ss_pred EEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEE
Q 046900 288 GTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCW 367 (442)
Q Consensus 288 G~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~ 367 (442)
||+++ ++.+.+.+......+.+++++|.++.+++++.+. ..+.++.++++++.+.+.|++.|+.+..++++|++|
T Consensus 238 G~~~~-~~~~~~~l~~~~~~~~~s~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 312 (368)
T PRK03317 238 GYLAA-APAVVDALRLVRLPYHLSAVTQAAARAALRHADE----LLASVAALRAERDRVVAWLRELGLRVAPSDANFVLF 312 (368)
T ss_pred hhhhC-CHHHHHHHHhcCCCCCCCHHHHHHHHHHhhCHHH----HHHHHHHHHHHHHHHHHHHHHCCCEeCCCCCcEEEE
Confidence 99998 5677777776665677899999999999976332 334456688899999999999999888899999888
Q ss_pred EecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 368 MNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 368 ~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.+++. +.++++.|+++ ||.+.++. .++++||+++. .++++++++.|++++...
T Consensus 313 ~~~~~---------~~~~~~~l~~~-Gv~v~~~~-----~~~~iRi~~~~--~~~~~~~~~~l~~~~~~~ 365 (368)
T PRK03317 313 GRFAD---------RHAVWQGLLDR-GVLIRDVG-----IPGWLRVTIGT--PEENDAFLAALAEVLATE 365 (368)
T ss_pred eccCC---------HHHHHHHHHHC-CEEEEeCC-----CCCeEEEecCC--HHHHHHHHHHHHHHHHHh
Confidence 76542 56778887766 99998742 25799999985 678999999999987653
No 85
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-46 Score=365.14 Aligned_cols=334 Identities=18% Similarity=0.229 Sum_probs=269.8
Q ss_pred ceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 49 GVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 49 ~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
.+|+|+.|+|+++. +.+.+.+.+... ....|+++ +.++||++||+|++ +++++|++|+
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~------------~~~~Y~~~-~~~~Lr~~ia~~~~--------~~~~~I~it~ 91 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAAA------------EIWKYGDP-ENHDLRHALAAHHG--------VAPENIMVGE 91 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHH------------HhhcCCCC-ccHHHHHHHHHHhC--------CCHHHEEEcC
Confidence 45799999998853 455555544321 13468776 57999999999974 6789999999
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe
Q 046900 128 GATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT 207 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~ 207 (442)
|+++++..++.+++++||.|++++|+|+.+...+.. .|++++.+|++.+ .+|++.+++.+.. .++++++++
T Consensus 92 G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~-~g~~~~~vp~~~~---~~~~~~l~~~~~~-----~~~~~i~l~ 162 (369)
T PRK08153 92 GIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHVAG-FGGRLVTVPYRDD---REDLDALLDAARR-----ENAPLVYLA 162 (369)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHH-cCCeEEEeeCCCC---CCCHHHHHHHhcc-----cCCcEEEEe
Confidence 999999999999999999999999999999988885 8999999998643 3788888776642 267899999
Q ss_pred CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee
Q 046900 208 NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV 287 (442)
Q Consensus 208 ~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri 287 (442)
||+||||.++|.+++++|+++|+ ++++||+||+|.++.+++. ..+ +... .+++++++||||.||+||+|+
T Consensus 163 ~P~NPtG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~-~~~---~~~~-----~~~~i~~~SfSK~~g~~GlRi 232 (369)
T PRK08153 163 NPDNPMGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAGA-APP---IDTD-----DPNVIRMRTFSKAYGLAGARV 232 (369)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCccc-chh---hhhc-----CCCEEEEecchHhccCcchhe
Confidence 99999999999999999999987 4899999999999877542 222 2222 368999999999999999999
Q ss_pred EEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEE
Q 046900 288 GTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCW 367 (442)
Q Consensus 288 G~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~ 367 (442)
||+++ ++.+.+.+.+....+.+++++|.++..++++.+ ++++.++.++++|+.+.+.|++.|+.+. |.+++|+|
T Consensus 233 G~~v~-~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~----~~~~~~~~~~~~r~~~~~~L~~~g~~~~-p~~~~f~~ 306 (369)
T PRK08153 233 GYAIG-APGTIKAFDKVRNHFGMNRIAQAAALAALKDQA----YLAEVVGKIAAARDRIAAIARANGLTPL-PSATNFVA 306 (369)
T ss_pred eeeec-CHHHHHHHHHhhcCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHCCCccC-CCcCcEEE
Confidence 99999 566777776666667889999999999997644 4677888999999999999998888754 67788999
Q ss_pred EecCCcccccChhhHHHHHHHHHHcCcEEEe-CCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 368 MNLSPLLEEQTREGELALWDSMLHEVKLNIS-PGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 368 ~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~-pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
++++... ..+.+++++|+++ ||.++ ||.. ..++++||+++. +++++.+++.|.+++..+++
T Consensus 307 ~~~~~~~-----~~a~~l~~~l~~~-Gi~v~~p~~~---~~~~~iRis~~~--~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 307 IDCGRDG-----AFARAVLDGLIAR-DIFVRMPGVA---PLDRCIRVSCGP--DEELDLFAEALPEALEAARK 368 (369)
T ss_pred EECCCCc-----ccHHHHHHHHHHC-CeEEeeCCCC---CCCCeEEEecCC--HHHHHHHHHHHHHHHHHhhc
Confidence 9886311 1367888888776 99995 6542 235799999985 78899999999999886654
No 86
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-46 Score=364.65 Aligned_cols=320 Identities=19% Similarity=0.301 Sum_probs=262.5
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecC
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAG 128 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G 128 (442)
+.|+|+.|+|+++++.. +. . .....||+.. ..+|+++++++++ +++++|++|+|
T Consensus 29 ~~~~l~~Nenp~~~~~~---~~-~-------------~~~~~Yp~~~-~~~l~~~~a~~~g--------~~~~~I~~~~G 82 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQ---LT-Q-------------QTLNRYPECQ-PKAVIENYAAYAG--------VKPEQVLVSRG 82 (351)
T ss_pred CceEecCCCCCCCCChh---hc-c-------------cccccCCCCC-hHHHHHHHHHHhC--------CCHHHEEEcCC
Confidence 46899999999875421 10 0 1246798764 4799999998865 68999999999
Q ss_pred hHHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe
Q 046900 129 ATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT 207 (442)
Q Consensus 129 ~~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~ 207 (442)
+++++.+++++++++| |.|+++.|+|+.|...++. .|++++.+|+++ +|.+|++.+++++ + +++++++|
T Consensus 83 s~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~-~G~~~~~v~~~~--~~~~d~~~l~~~~-~------~~~lv~l~ 152 (351)
T PRK01688 83 ADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAET-IGVEIRTVPTLD--NWQLDLPAIADNL-D------GVKVVYVC 152 (351)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHH-cCCEEEEeecCC--CCCCCHHHHHHhc-c------CCcEEEEe
Confidence 9999999999999997 9999999999999998885 999999999864 4889999998876 2 67899999
Q ss_pred CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee
Q 046900 208 NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV 287 (442)
Q Consensus 208 ~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri 287 (442)
|||||||.+++.+++++|++.|++ +.+||+||+|.+|... .+...+... .+++++++||||.||++|+|+
T Consensus 153 nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~----~s~~~~~~~-----~~n~iv~rSfSK~~glaGlRi 222 (351)
T PRK01688 153 SPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQ----ASLAGWLAE-----YPHLVILRTLSKAFALAGLRC 222 (351)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCC----CChHHHHhh-----CCCEEEEecchHhhcCHHHHH
Confidence 999999999999999999999976 6889999999997522 244444443 479999999999999999999
Q ss_pred EEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEE
Q 046900 288 GTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFC 366 (442)
Q Consensus 288 G~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~ 366 (442)
||+++ ++.+.+.+++....+.++.++|.++.++|.+.. .+++++.++.++++|+++.+.|+++ ++....|.+++|+
T Consensus 223 Gy~i~-~~~~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi 299 (351)
T PRK01688 223 GFTLA-NEEVINLLLKVIAPYPLSTPVADIAAQALSPQG--IAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYI 299 (351)
T ss_pred hHHhC-CHHHHHHHHhccCCCCCCHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEE
Confidence 99998 567777788777778889888988888887643 2456777888899999999999987 6654445667799
Q ss_pred EEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHH
Q 046900 367 WMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRI 430 (442)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l 430 (442)
|++++. +.++++.|+++ ||.|+++..|.. .++|+||+++. .++++++++.|
T Consensus 300 ~~~~~~---------~~~l~~~L~~~-gi~vr~~~~~~~-~~~~iRis~~~--~~e~~~l~~al 350 (351)
T PRK01688 300 LARFTA---------SSAVFKSLWDQ-GIILRDQNKQPG-LSNCLRITIGT--REECQRVIDAL 350 (351)
T ss_pred EEEcCC---------HHHHHHHHHHC-CeEEEECCCcCC-CCCeEEEeCCC--HHHHHHHHHhh
Confidence 998863 56788888776 999998776642 36799999985 68899998876
No 87
>PLN02397 aspartate transaminase
Probab=100.00 E-value=1.4e-45 Score=365.20 Aligned_cols=346 Identities=17% Similarity=0.266 Sum_probs=260.1
Q ss_pred CCceeeeeccc-ccc-c----HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 47 PSGVIQMGLAE-NQV-S----FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 47 ~~~~i~l~~~~-n~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
....|+|+.+. +.. + .+.+.+........ ....+|++..|.++||+++++|+.+... ...++
T Consensus 47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~----------~~~~~Y~~~~G~~~LR~aia~~~~~~~~--~~~~~ 114 (423)
T PLN02397 47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAG----------SRNKEYLPIEGLAEFNKLSAKLAYGADS--PAIKE 114 (423)
T ss_pred CcceEecccceeeCCCCCcccchHHHHHHHHhhcc----------CCCCCCCCcCCCHHHHHHHHHHHcCCCC--chhhc
Confidence 34668888875 222 1 23455443332110 1245799999999999999999965422 11223
Q ss_pred Cc-----EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 121 NR-----IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 121 ~~-----i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
++ |+.++|+.+ +...+..++.|||+|++++|+|+.|...++. .|++++.+|+..+++|++|++.+++.+++.
T Consensus 115 ~~i~~~~i~~g~Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~-~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~- 191 (423)
T PLN02397 115 NRVATVQCLSGTGSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFRD-AGVPVRTYRYYDPKTRGLDFDGLLEDLKAA- 191 (423)
T ss_pred CeeEeeecccchHHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHHH-cCCeEEEeecccCcCCccCHHHHHHHHHhC-
Confidence 33 344444443 3333444556999999999999999999995 999999999844445889999999888642
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC--CCcccHHHHHhhhcCCCCCcEEEE
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS--SEFVSIAEILEARQYKDSERVHIV 273 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~--~~~~s~~~~~~~~~~~~~~~vi~~ 273 (442)
..+++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.|++ ..+.++..+... .+++|++
T Consensus 192 --~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~-----~~~vI~~ 264 (423)
T PLN02397 192 --PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVED-----GHEILVA 264 (423)
T ss_pred --CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhc-----CCcEEEE
Confidence 1356788889999999999999999999999999999999999999999854 133444444332 3579999
Q ss_pred ecCcccCCCCCceeEEEe--ecCHHHHH----HHHHccc--cCCCcHHHHHHHHHHhcCchhHHHH---HHHHHHHHHHH
Q 046900 274 YSLSKDLGLPGFRVGTIY--SYNDKVVT----TARRMSS--FTLISSQTQYLLASMLSNKKFTENY---IKTNRERLQKR 342 (442)
Q Consensus 274 ~S~SK~~g~~G~RiG~i~--~~~~~~~~----~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~---~~~~~~~~~~~ 342 (442)
+||||.|+++|||+||++ ++++.+.+ .+..... ...++.+.|.+++.++.++++.+.+ ++++++.++++
T Consensus 265 ~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~r 344 (423)
T PLN02397 265 QSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISM 344 (423)
T ss_pred EECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999985 44444332 2333222 2345778999999999887544444 67889999999
Q ss_pred HHHHHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecC
Q 046900 343 YQMIIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANM 418 (442)
Q Consensus 343 ~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~ 418 (442)
|+.+.+.|++.| +++..|+||||+|++++ .++++.|++++||.+.+ .+ |++++..
T Consensus 345 r~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~-----------~~~~~~Ll~~~~V~v~~--------~~--Ri~~~~~ 403 (423)
T PLN02397 345 RQKLYDALEARGSPGDWSHITKQIGMFSFTGLN-----------KEQVDRMTKEYHIYMTR--------DG--RISMAGL 403 (423)
T ss_pred HHHHHHHHHhcCCCCCCCcccCCceEEEecCCC-----------HHHHHHHHHhCCEEECC--------CC--eEEEeeC
Confidence 999999999887 77888999999999874 24888999999999973 23 9999866
Q ss_pred CHHHHHHHHHHHHHHHH
Q 046900 419 SEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 419 ~~e~i~~~l~~l~~~l~ 435 (442)
+++.+++++++|++++.
T Consensus 404 ~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 404 SSKNVPYLADAIHAVVT 420 (423)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999999999975
No 88
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.2e-46 Score=360.90 Aligned_cols=329 Identities=18% Similarity=0.271 Sum_probs=264.9
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC-CcEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i~ 124 (442)
+.++|+|+.++|+++ ++.+.+.+.+.... .....|++ .|.++||+++|+|++ +++ ++|+
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~Y~~-~~~~~lr~~ia~~~~--------~~~~~~I~ 85 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAE----------VALNRYPD-PRAAALKAALRAAMG--------VPAGADVL 85 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhc----------cccccCCC-CCHHHHHHHHHHHhC--------cCCCCcEE
Confidence 467899999999885 35566665544321 12457887 578999999999985 333 5899
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++..++.+++++||.|++++|+|..+...++. .|++++.+++++ +|.+|++.+++.+.+ .+++++
T Consensus 86 ~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~-~g~~~~~i~~~~--~~~~d~~~l~~~~~~-----~~~~~v 157 (356)
T PRK04870 86 LGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKL-AGLEFVGVPLTA--DFTLDLPAMLAAIAE-----HRPALV 157 (356)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHH-cCCEEEEecCCC--CCCCCHHHHHHHhhc-----CCCCEE
Confidence 999999999999999999999999999999999998885 999999999874 478999999998864 278899
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++|||||||.+++.+++++|+++| ++++|+||+|.++.+. .+.+ .+.. .+++++++|||| +++||
T Consensus 158 ~l~~p~NPtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~--~~~~--~~~~------~~~vi~~~S~SK-~~~~G 223 (356)
T PRK04870 158 FLAYPNNPTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAGD--SWLP--RLAR------FPNLLVMRTVSK-LGLAG 223 (356)
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcCc--chHH--HHhh------CCCEEEEecchh-hhhHH
Confidence 9999999999999999999999998 6789999999986532 1111 1222 468999999999 89999
Q ss_pred ceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCce
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAG 363 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g 363 (442)
+|+||+++ ++.+.+.+......+.++.++|.++..++++.+ ++++.++.++++++.+.+.|++. |+.+. +.+|
T Consensus 224 lRiG~~i~-~~~~i~~~~~~~~~~~~~~~~q~~a~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~ 297 (356)
T PRK04870 224 LRLGYLAG-HPAWIAELDKVRPPYNVNVLTQATALFALEHVD----VLDAQAAQLRAERTRLAAALAALPGVTVF-PSAA 297 (356)
T ss_pred HhhhhhhC-CHHHHHHHHHccCCCcCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCC
Confidence 99999999 456666666655567788899999888887543 35677788899999999999887 77665 4566
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+|+|++++. ..+++..|.+ +||.|+||+.|+...++++||+++. .+++++++++|.+++
T Consensus 298 ~~~~~~~~~---------~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~~ 356 (356)
T PRK04870 298 NFILVRVPD---------AAAVFDGLKT-RGVLVKNLSGMHPLLANCLRVTVGT--PEENAQFLAALKAAL 356 (356)
T ss_pred eEEEEECCC---------HHHHHHHHHH-CCEEEEECCCCCCCCCCeEEEeCCC--HHHHHHHHHHHHHhC
Confidence 799999872 4567776655 5999999999865557899999996 677999999988753
No 89
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-45 Score=357.56 Aligned_cols=325 Identities=20% Similarity=0.277 Sum_probs=259.5
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|||+.++|+++ ++.+.+.+.+... ....|+++.|.++||+++|+|++ +++++|++
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~Y~~~~g~~~lr~aia~~~~--------~~~~~I~i 80 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLG------------DLAAYPSTEDERRARAAVAARHG--------RTPDEVLL 80 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhh------------HhhcCCCccchHHHHHHHHHHhC--------cChhhEEE
Confidence 357899999999874 4556666665431 23569888899999999999974 67999999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++. + ++| .++++.|+|..+...++. .|++++.++++++ |.+|++.+. + ++++++
T Consensus 81 t~Ga~~al~~~~~-l-~~~-~viv~~P~y~~~~~~~~~-~G~~i~~v~~~~~--~~~d~~~l~----~------~~~~i~ 144 (349)
T PRK07908 81 LAGAAEGFALLAR-L-RPR-RAAVVHPSFTEPEAALRA-AGIPVHRVVLDPP--FRLDPAAVP----D------DADLVV 144 (349)
T ss_pred CCCHHHHHHHHHh-c-CCC-eEEEeCCCChHHHHHHHH-cCCEEEeeccCcc--cCcChhHhc----c------CCCEEE
Confidence 9999999999988 4 565 577789999999988884 9999999999753 778887543 2 678999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
++|||||||.++|.+++. ++|+ ++.++|+||+|+++.. +. ..++.+. + .+++++++||||.||++|+
T Consensus 145 l~np~NPTG~~~~~~~l~---~l~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~--~-----~~~~i~i~S~SK~~~l~Gl 211 (349)
T PRK07908 145 IGNPTNPTSVLHPAEQLL---ALRR-PGRILVVDEAFADAVP-GE-PESLAGD--D-----LPGVLVLRSLTKTWSLAGL 211 (349)
T ss_pred EcCCCCCCCCCcCHHHHH---HHHh-cCCEEEEECcchhhcc-CC-ccccccc--c-----CCCEEEEeecccccCCccc
Confidence 999999999999977655 4554 4778999999998754 32 3344332 1 3679999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEE
Q 046900 286 RVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLF 365 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~ 365 (442)
|+||+++ ++.+.+.+......+.++++.|.++.+++.+.. .+++++.++.++++|+++.+.|++.|+++..|.+|+|
T Consensus 212 RiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~~ 288 (349)
T PRK07908 212 RVGYALG-APDVLARLTRGRAHWPVGTLQLEAIAACCAPRA--VAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPF 288 (349)
T ss_pred eeeeeec-CHHHHHHHHhcCCCCCccHHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCceE
Confidence 9999998 566667776666667788888888888887432 4567888999999999999999988888888889999
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|++++. ..++.+.| +++||.+.||+.|+...+++||||++. +++++++++.|++++.
T Consensus 289 ~~~~~~~---------~~~~~~~l-~~~gI~v~~g~~f~~~~~~~vRis~~~--~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 289 VLVRVPD---------AELLRKRL-RERGIAVRRGDTFPGLDPDYLRLAVRP--RAEVPVLVQALAEILK 346 (349)
T ss_pred EEEECCc---------HHHHHHHH-HhCCEEEEECCCCCCCCCCeEEEEeCC--CccHHHHHHHHHHHHh
Confidence 9999875 34566666 455999999999865457899999974 6779999999988764
No 90
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1.3e-45 Score=359.47 Aligned_cols=325 Identities=18% Similarity=0.240 Sum_probs=262.7
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
+++|+|+.++|+++ ++.+.+.+.+... ....|++. +.++||++|+++++ +++++|++|
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~------------~~~~Y~~~-~~~~Lr~aia~~~~--------v~~e~I~it 101 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAA------------LSGRYDLE-LEDDLRTLFAAQEG--------LPADHVMAY 101 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHH------------HhcCCCCc-hHHHHHHHHHHHhC--------cChhhEEEc
Confidence 57899999999875 4555555544321 12358765 48999999999864 689999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++.+++.+++++||.|++++|+|+.|...++. .|++++.+++++ +|.+|++.+++. . .+++++++
T Consensus 102 ~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~~-~------~~~~~v~l 171 (370)
T PRK09105 102 AGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADA-QGAPVAKVPLRA--DGAHDVKAMLAA-D------PNAGLIYI 171 (370)
T ss_pred CChHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHH-cCCeEEEecCCC--CCCCCHHHHHhc-C------CCCCEEEE
Confidence 9999999999999999999999999999999998885 999999999865 467899998765 2 26789999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
||||||||.+++.++++++++.++ ++++||+||+|.+|.. . .+..++... .+++++++||||.||++|+|
T Consensus 172 ~nP~NPTG~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~--~--~s~~~~~~~-----~~~vi~~~SfSK~~g~~GlR 241 (370)
T PRK09105 172 CNPNNPTGTVTPRADIEWLLANKP-AGSVLLVDEAYIHFSD--A--PSVVDLVAQ-----RKDLIVLRTFSKLYGMAGMR 241 (370)
T ss_pred eCCCCCCCcCcCHHHHHHHHHhCC-CCcEEEEECchHHhcc--C--cchHHHHhh-----CCCEEEEecccHhhcCCccc
Confidence 999999999999999999999764 5899999999987542 1 244444432 47899999999999999999
Q ss_pred eEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEE
Q 046900 287 VGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFC 366 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~ 366 (442)
+||+++ ++.+.+.+... ..+.++.+.|.++.+++.+. +|+++.++.++++++.+.+.|++.|+++.+++++||
T Consensus 242 iG~~v~-~~~~i~~l~~~-~~~~~~~~~~~aa~~~L~~~----~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~f~- 314 (370)
T PRK09105 242 LGLAAA-RPDLLAKLARF-GHNPLPVPAAAAGLASLRDP----KLVPQRRAENAAVREDTIAWLKKKGYKCTPSQANCF- 314 (370)
T ss_pred eeeeec-CHHHHHHHHhc-CCCCcCHHHHHHHHHHHhCH----HHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCcEE-
Confidence 999999 46666666655 44557888888888888764 357778889999999999999999998888888866
Q ss_pred EEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 367 WMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
|++++. +..++++.|+++ ||.+ |..|. ..++|+||+++. +++++++++.|++++
T Consensus 315 ~~~~~~--------~~~~l~~~L~~~-gI~v--~~~~~-~~~~~~Ris~~~--~~~~~~l~~al~~~~ 368 (370)
T PRK09105 315 MVDVKR--------PAKAVADAMAKQ-GVFI--GRSWP-IWPNWVRVTVGS--EEEMAAFRSAFAKVM 368 (370)
T ss_pred EEeCCC--------CHHHHHHHHHHC-CcEE--ecCCC-CCCCeEEEEcCC--HHHHHHHHHHHHHHh
Confidence 577752 257889999877 9998 44453 346899999985 677899998888765
No 91
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.9e-45 Score=357.49 Aligned_cols=348 Identities=20% Similarity=0.301 Sum_probs=276.8
Q ss_pred CCCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 46 NPSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
++.++|+|+.++|.++ ++.+.+.+.+.... .....|+++.|+++||+++|++++ +++++|+
T Consensus 26 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~----------~~~~~y~~~~g~~~lr~~ia~~l~--------~~~~~v~ 87 (380)
T PRK06225 26 KDKEMIWMGQNTNHLGPHEEVREAMIRCIEE----------GEYCKYPPPEGFPELRELILKDLG--------LDDDEAL 87 (380)
T ss_pred hcCCeEEccCCCCCCCCCHHHHHHHHHHHhc----------CCCCCCCCCcchHHHHHHHHHhcC--------CCCCcEE
Confidence 3567899999999875 45566655544321 123568888899999999999974 6788999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC-CCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD-SSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
+|+|+++++..++++++.+||.|++++|+|..+...+.. .|+++++++++ ++++|.+|++.+++.+.+ ++++
T Consensus 88 ~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~~ 160 (380)
T PRK06225 88 ITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASR-FGAEVIEVPIYSEECNYKLTPELVKENMDE------NTRL 160 (380)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHH-hCceEEeeccccccCCccCCHHHHHhhcCC------CceE
Confidence 999999999999999999999999999999998888874 89999999975 344688999999998764 7889
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
+++++|+||||.+++.+++++|+++|+++|+++|+||+|.++..+. .+...+. .++++++.||||.+|++
T Consensus 161 v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~-------~~~~i~~~s~SK~~g~~ 230 (380)
T PRK06225 161 IYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH---TLAAEYA-------PEHTVTSYSFSKIFGMA 230 (380)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC---CchhhcC-------CCCEEEEeechhhcCCc
Confidence 9999999999999999999999999999999999999998865322 2222221 36789999999999999
Q ss_pred CceeEEEeecCHHHHHHHHHcc-ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCee-ecC
Q 046900 284 GFRVGTIYSYNDKVVTTARRMS-SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIEC-LKG 360 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~ 360 (442)
|+|+||++++ +.+.+.+.... ..++.+.++|.++..++... .+++++.++.++++++.+.+.|++. |+.+ ..+
T Consensus 231 G~RiG~i~~~-~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 306 (380)
T PRK06225 231 GLRIGAVVAT-PDLIEVVKSIVINDLGTNVIAQEAAIAGLKVK---DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYP 306 (380)
T ss_pred cceeEEEecC-HHHHHHHHHHHhcccCCCHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCC
Confidence 9999999995 56666665443 23556888999888888643 3456677778888888899999874 5433 235
Q ss_pred CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC-CCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 361 NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS-EPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 361 ~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~-~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.+|+|+|++++.... +..++++.|.++ ||.+.||..|+.. +++++|++++. +++++++++++|++++++.+.
T Consensus 307 ~~g~~~~~~~~~~~~-----~~~~l~~~l~~~-gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 307 SHGNMMVIDISEAGI-----DPEDLVEYLLER-KIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred CCCeEEEEEcccccC-----CHHHHHHHHHHC-CEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHHHHhhc
Confidence 567789999865211 367888888765 9999999876532 35799999997 889999999999999987653
No 92
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.5e-45 Score=357.81 Aligned_cols=334 Identities=20% Similarity=0.293 Sum_probs=272.2
Q ss_pred CCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|++++|++++ +.+.+.+.+... ....|++..+ .+||+++|++++ +++++|++
T Consensus 31 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~------------~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~~ 89 (367)
T PRK02731 31 IADIIKLASNENPLGPSPKAIEAIRAAAD------------ELHRYPDGSG-FELKAALAEKFG--------VDPERIIL 89 (367)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHHH------------hhcCCCCCcH-HHHHHHHHHHhC--------cCHHHEEE
Confidence 5578999999988743 445555544321 2356877654 799999999974 57899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++.+++++||.|++++|+|..+...+. ..|++++.++++ ++.+|++.+++.+++ ++++|+
T Consensus 90 t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~-~~g~~~~~~~~~---~~~~~~~~l~~~~~~------~~~~v~ 159 (367)
T PRK02731 90 GNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQ-AVGAKPVEVPAK---DYGHDLDAMLAAVTP------RTRLVF 159 (367)
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHH-HcCCeEEEeccc---CCCCCHHHHHHHhCC------CCcEEE
Confidence 9999999999999999999999999999998888777 489999999874 467899999998864 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
++|||||||.+++.++++++++.|+ +++++|+||+|.++.+++....++ ..... .+++++++||||.||++|+
T Consensus 160 l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~-~~~~~-----~~~~i~~~S~SK~~g~~G~ 232 (367)
T PRK02731 160 IANPNNPTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGL-ELVAK-----FPNVVVTRTFSKAYGLAGL 232 (367)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHH-HHHhh-----cCCEEEEeeehHhhcCccc
Confidence 9999999999999999999999885 699999999999988755433333 22221 4789999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEE
Q 046900 286 RVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLF 365 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~ 365 (442)
|+||+++ ++.+.+.+++....+..++++|.++.+++++.+ ++++.++.++++++.+.+.|++.|+.+.+ .+|+|
T Consensus 233 RiG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~g~~ 306 (367)
T PRK02731 233 RVGYGIA-PPEIIDALNRVRQPFNVNSLALAAAVAALDDDA----FVEKSRALNAEGMAWLTEFLAELGLEYIP-SVGNF 306 (367)
T ss_pred ceeeeeC-CHHHHHHHHHccCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHHCCCccCC-CCceE
Confidence 9999999 566777777666667788999999999998643 46777888999999999999988888764 45679
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|++++... ++.++++.|.++ ||.+.||..|+ .++++||+++. .++++++++.|+++++
T Consensus 307 ~~i~~~~~~------~~~~~~~~L~~~-gI~v~~~~~~~--~~~~iRis~~~--~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 307 ILVDFDDGK------DAAEAYQALLKR-GVIVRPVAGYG--LPNALRITIGT--EEENRRFLAALKEFLA 365 (367)
T ss_pred EEEECCCCC------CHHHHHHHHHHC-CEEEEeCCCCC--CCCeEEEecCC--HHHHHHHHHHHHHHHh
Confidence 999985432 367888888765 99999998885 35799999985 6789999999998864
No 93
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-45 Score=355.61 Aligned_cols=325 Identities=17% Similarity=0.272 Sum_probs=259.6
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|+|+.++|+++ ++.+.+.+.+.... ....|++. |.++||++||+|++ +++++|++|
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~y~~~-~~~~lr~aia~~~~--------~~~~~I~it 83 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGD-----------DLRLYPDP-NADALRQAIAAYYG--------LDPEQVFVG 83 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhh-----------hhhcCCCC-cHHHHHHHHHHHhC--------CCHHHEEEc
Confidence 57899999999885 46666666544311 23578766 66999999999985 689999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++.+++++++++||.|++++|+|+.|...++. .|++++.+++++ +|.+|++.+++ .++++++
T Consensus 84 ~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~----------~~~~v~~ 150 (353)
T PRK05387 84 NGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAGL-YGIPYEEIPLDD--DFSIDVEDYLR----------PNGGIIF 150 (353)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHH-cCCEEEEeecCC--CCCCCHHHHHh----------cCCEEEE
Confidence 9999999999999999999999999999999888884 899999999864 47789998863 3468999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
+|||||||.++|.+++++|+++++ +++||+||+|.+| ++.. ...+... .+++++++||||.||++|+|
T Consensus 151 ~~P~NPtG~~~~~~~~~~l~~~~~--~~~livDe~y~~~--~~~~---~~~~~~~-----~~~~i~~~S~SK~~~~~GlR 218 (353)
T PRK05387 151 PNPNAPTGIALPLAEIERILAANP--DSVVVIDEAYVDF--GGES---AIPLIDR-----YPNLLVVQTFSKSRSLAGLR 218 (353)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCC--CcEEEEeCccccc--CCcc---hHHHHhh-----CCCEEEEEehhHhhcchhhh
Confidence 999999999999999999998754 8999999999874 3322 2222222 47799999999999999999
Q ss_pred eEEEeecCHHHHHHHHHccc---cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 287 VGTIYSYNDKVVTTARRMSS---FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
+||+++ ++.+.+.+++... .+.++.+.|.++.+++.+.++ +++.++++.++++.+.+.|++.|+++. +.++
T Consensus 219 ~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~ 292 (353)
T PRK05387 219 VGFAIG-HPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAY----FEETRAKVIATRERLVEELEALGFEVL-PSKA 292 (353)
T ss_pred ceeeec-CHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCCCeEC-CCcC
Confidence 999998 5666666665442 246788999999999876543 566788889999999999999888765 4567
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|+|++++.. ++.++++.|.++ ||.+.+... ...++++||+++. .+++++++++|++++.
T Consensus 293 ~~~~~~~~~~-------~~~~~~~~l~~~-gi~v~~~~~--~~~~~~iRis~~~--~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 293 NFVFARHPSH-------DAAELAAKLRER-GIIVRHFNK--PRIDQFLRITIGT--DEEMEALVDALKEILA 352 (353)
T ss_pred cEEEEECCCC-------CHHHHHHHHHHC-CEEEEECCC--CCCCCeEEEEeCC--HHHHHHHHHHHHHHhh
Confidence 7999998742 367888888666 999985322 1235799999985 6889999999998765
No 94
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2e-45 Score=353.94 Aligned_cols=312 Identities=16% Similarity=0.228 Sum_probs=250.4
Q ss_pred CCceeeeecccccccHH--HHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 47 PSGVIQMGLAENQVSFD--LLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
+..+|+|+.|+|+++++ .+.. .....||+.. .+||+++|++++ + .++++|+
T Consensus 23 ~~~~i~ls~Nenp~~~~~~~~~~------------------~~~~~Yp~~~--~~L~~~ia~~~~------~-~~~~~I~ 75 (339)
T PRK06959 23 YDAWLDLSTGINPHGYPVPPVPA------------------DAWRRLPEDD--DGLAACAARYYG------A-PDAAHVL 75 (339)
T ss_pred hhhhceeccCCCCCCCCCCCCCH------------------HHHHhCCCch--HHHHHHHHHHhC------C-CCcccEE
Confidence 45789999999998654 1100 1235688753 899999999986 2 1358999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|++++|.++.. ++++|| |+++.|+|+.|...++. .|++++.++++. +.+. + .++++
T Consensus 76 i~~Gs~e~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~-~g~~~~~v~~~~--------~~~~----~------~~~~v 134 (339)
T PRK06959 76 PVAGSQAAIRALPA-LLPRGR-VGIAPLAYSEYAPAFAR-HGHRVVPLDEAA--------DTLP----A------ALTHL 134 (339)
T ss_pred ECcCHHHHHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHH-CCCEEEeecccc--------hhcc----c------cCCEE
Confidence 99999999998765 567877 88999999999999995 999999988642 2221 1 45689
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++||||||||.+++.+++++|++.|++++.++|+||+|.++.+. .++..+.. .+++++++||||.||+||
T Consensus 135 ~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~------~~~vi~l~SfSK~~gl~G 204 (339)
T PRK06959 135 IVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTD------RPGLVVLRSVGKFFGLAG 204 (339)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccC------CCCEEEEecChhhcCCcc
Confidence 99999999999999999999999999899999999999997532 23433322 377999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceE
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGL 364 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~ 364 (442)
+|+||+++ ++.+.+.+++....+.++.++|.++.++|++.++ .++.++.++++|+++.+.|++.|+++. .+++
T Consensus 205 lRiGy~v~-~~~li~~l~~~~~~~~vs~~~q~a~~~~L~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~--~~~~ 277 (339)
T PRK06959 205 VRAGFVLA-APALLAALRDALGAWTVSGPARHAVRAAFADAAW----QAAMRERLAADGARLAALLRAHGFAVH--ATPL 277 (339)
T ss_pred hheEEEec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCcHHH----HHHHHHHHHHHHHHHHHHHHHCCCCcc--Ccce
Confidence 99999999 5677788877777788899999999999987554 567789999999999999999888765 3578
Q ss_pred EEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 365 FCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
|+|++++. +.++++.|.++ ||.|++ |+ ..+++||+++. +.++++++++.|+++++.+..
T Consensus 278 f~~~~~~~---------~~~l~~~l~~~-GI~vr~---~~--~~~~lRisi~~-~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 278 FSWTDDPR---------AAALHAALARR-GIWTRY---FA--PPPSVRFGLPA-DEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred EEEEeCCC---------HHHHHHHHHhC-CeEEEE---CC--CCCeEEEECCC-CHHHHHHHHHHHHHHHHHHhh
Confidence 99998753 46788888776 999985 32 24699999965 578899999999988876543
No 95
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-44 Score=349.66 Aligned_cols=319 Identities=19% Similarity=0.288 Sum_probs=255.7
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
.++|+|+.|+|+++++.. + .. .....|++. +..+||+++|++++ +++++|++|+
T Consensus 31 ~~~~~l~~ne~~~~~~~~---~-~~-------------~~~~~Yp~~-~~~~Lr~aia~~~~--------~~~~~I~it~ 84 (354)
T PRK04635 31 RGDIWINANESPFNNEYK---L-DL-------------ARLNRYPEC-QPPELINAYSAYAG--------VAPEQILTSR 84 (354)
T ss_pred CCcEEeeCCCCCCCCChh---h-hh-------------HHhccCCCC-CHHHHHHHHHHHhC--------cCHHHEEEeC
Confidence 456899999999865421 0 00 124569876 57999999999864 7899999999
Q ss_pred ChHHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 128 GATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
|+++++.+++.+++++| |.|+++.|+|+.|...++. .|++++.+|+++ +|.+|++.+++ + + ++|+|++
T Consensus 85 Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~-~g~~v~~v~~~~--~~~~~~~~l~~-~-~------~~~li~i 153 (354)
T PRK04635 85 GADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAET-FNVGVKALPLTA--DYQLPLDYIEQ-L-D------GAKLVFI 153 (354)
T ss_pred CHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHH-cCCEEEEEecCC--CCCCCHHHHHh-c-c------CCCEEEE
Confidence 99999999999999999 8999999999999988884 999999999874 46788888863 2 2 7899999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
||||||||.+++.+++++|++.|+ +++||+||+|.++... .+..++... .+++++++||||.||++|+|
T Consensus 154 ~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~----~s~~~~~~~-----~~~~iv~~S~SK~~~l~GlR 222 (354)
T PRK04635 154 CNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPE----YSVADLLAS-----YPNLVVLRTLSKAFALAGAR 222 (354)
T ss_pred eCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccC----cchHHHHhh-----CCCEEEEechHHHhhhhHHH
Confidence 999999999999999999999886 4999999999986532 244444333 47899999999999999999
Q ss_pred eEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCceEE
Q 046900 287 VGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECLKGNAGLF 365 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~ 365 (442)
+||+++ ++.+.+.+......+.++.+.|.++.+++.+.. .+++++.++.++++|+++.+.|++.+ +++.+++ |.|
T Consensus 223 lG~~i~-~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f 298 (354)
T PRK04635 223 CGFTLA-NEELIEILMRVIAPYPVPLPVSEIATQALSEAG--LARMKFQVLDLNAQGARLQAALSMYGGAKVLEGN-GNY 298 (354)
T ss_pred HhhhhC-CHHHHHHHHhhcCCCCCCHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC-CcE
Confidence 999999 566677766666667788889988888887643 23466777889999999999999885 7777666 468
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHN 432 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~ 432 (442)
+|++++. +.++.+.|.+ +||.+++++.+ ..++++|||++. .+++++++++|++
T Consensus 299 ~~~~~~~---------~~~~~~~l~~-~gv~v~~~~~~--~~~~~lRis~~~--~e~~~~l~~al~~ 351 (354)
T PRK04635 299 VLAKFDD---------VDAVFKALWD-AGIVARAYKDP--RLANCIRFSFSN--RAETDKLIGLIRN 351 (354)
T ss_pred EEEECCC---------HHHHHHHHHH-CCEEEEECCCC--CCCCeEEEEeCC--HHHHHHHHHHHHH
Confidence 9998863 4466666654 59999876433 235799999985 7889999988865
No 96
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.6e-44 Score=347.10 Aligned_cols=310 Identities=18% Similarity=0.245 Sum_probs=242.5
Q ss_pred CCceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 47 PSGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
+.++|+|+.|+|+++++... ... .....|++. ..+||++||++++ +++|++|
T Consensus 19 ~~~~i~l~~ne~p~~~~~~~-~~~---------------~~~~~yp~~--~~~Lr~~ia~~~~----------~~~I~it 70 (330)
T PRK05664 19 LADWLDLSTGIAPWPWPVPA-IPA---------------DAWARLPET--DDGLEAAARAYYG----------APQLLPV 70 (330)
T ss_pred HHHheeecCCcCCCCCCCcc-cCH---------------HHHHhCCCC--hHHHHHHHHHHhC----------CCCEEEC
Confidence 34679999999987543110 000 012357653 3899999999974 5799999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|++++|.+++. +.+||+|++++|+|+.|...++. .|++++.+|++ .+++.+. +++++++
T Consensus 71 ~Gs~~al~~~~~--~~~gd~v~v~~P~y~~~~~~~~~-~g~~~~~v~~~----------~~~~~~~-------~~~~v~l 130 (330)
T PRK05664 71 AGSQAAIQALPR--LRAPGRVGVLSPCYAEHAHAWRR-AGHQVRELDEA----------EVEAALD-------SLDVLVV 130 (330)
T ss_pred cCHHHHHHHHHH--ccCCCEEEEcCCChHHHHHHHHH-cCCeEEEechh----------hHhhhhc-------CCCEEEE
Confidence 999999998863 57999999999999999999995 99999998753 3444442 5678999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
+|||||||.+++.+++++|+++|++++++||+||+|.++. . ..++.++.. .+++++++||||.||+||+|
T Consensus 131 ~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~--~--~~s~~~~~~------~~~vi~~~SfSK~~gl~GlR 200 (330)
T PRK05664 131 VNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT--P--QHSLAACAH------RPGLIVLRSFGKFFGLAGAR 200 (330)
T ss_pred eCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC--C--ccccccccc------CCCEEEEeeccccccCCCcc
Confidence 9999999999999999999999999999999999998753 1 234444432 47899999999999999999
Q ss_pred eEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEE
Q 046900 287 VGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFC 366 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~ 366 (442)
+||+++ ++.+.+.+.+....+.++.++|.++..+|.+..+ .++.++.++++|+++.+.|++.|++.. +..++|+
T Consensus 201 iG~~v~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~~~~f~ 274 (330)
T PRK05664 201 LGFVLA-EPALLRALAELLGPWTVSGPTRWLAQAALADTPW----QRRQRERLLAASQRLAALLRRHGLTPA-GGCALFQ 274 (330)
T ss_pred eEEEEe-CHHHHHHHHHhcCCCCCCHHHHHHHHHHHhChHH----HHHHHHHHHHHHHHHHHHHHHCCCccc-CCcceEE
Confidence 999999 4667777776666677899999999999987543 466788999999999999998876432 1223789
Q ss_pred EEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 367 WMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
|++++. +.++++.|.++ ||.|.+ |+ .++++||+++. +.++++++++.|+++.++
T Consensus 275 ~~~~~~---------~~~~~~~l~~~-gi~v~~---f~--~~~~iRis~~~-~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 275 WVRTED---------AAALHEFLARR-GILTRL---FE--QPASLRFGLPA-DEADWARLDQALLAYRKE 328 (330)
T ss_pred EEecCC---------HHHHHHHHHHC-CeEEEE---CC--CCCeEEEECCC-CHHHHHHHHHHHHHHHhh
Confidence 988752 56777777665 999984 43 35799999996 567788888888776543
No 97
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=2e-44 Score=350.30 Aligned_cols=335 Identities=18% Similarity=0.284 Sum_probs=265.9
Q ss_pred CCCCCCCCceeeeecccccc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 41 YEESTNPSGVIQMGLAENQV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 41 ~~~~~~~~~~i~l~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
|.++.++.++|+|+.+++++ +++.+.+.+.+... ....|++ .|..++|+++|++++ ++
T Consensus 15 ~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~------------~~~~y~~-~g~~~lr~~ia~~~~--------~~ 73 (352)
T PRK03321 15 YVPGKTVPGAIKLSSNETPFGPLPSVRAAIARAAA------------GVNRYPD-MGAVELRAALAEHLG--------VP 73 (352)
T ss_pred CCCCCCcccceeccCCCCCCCCCHHHHHHHHHHHH------------hcCcCCC-CcHHHHHHHHHHHhC--------cC
Confidence 55556666889999999987 44666666654421 2346864 699999999999985 67
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
+++|++|+|+++++..++..++++||.|+++.|+|..|...++. .|++++.++++++ +.+|++.+++.+++
T Consensus 74 ~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~-~g~~~~~v~~~~~--~~~~~~~l~~~~~~------ 144 (352)
T PRK03321 74 PEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPILVQV-AGATPVQVPLTPD--HTHDLDAMAAAITD------ 144 (352)
T ss_pred HHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHH-cCCEEEEccCCCC--CCCCHHHHHHhhcc------
Confidence 88999999999999999999999999999999999988888874 8999999998743 56899999998864
Q ss_pred ceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCccc
Q 046900 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKD 279 (442)
Q Consensus 200 ~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~ 279 (442)
+++++++++|+||||.+++.+++.++++.| +++++||+||+|.++.+++....++..+.. .+++++++||||.
T Consensus 145 ~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~------~~~vi~~~S~SK~ 217 (352)
T PRK03321 145 RTRLIFVCNPNNPTGTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRD------HPNVVVLRTFSKA 217 (352)
T ss_pred CCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhh------CCCEEEEecchHH
Confidence 788999999999999999999999888876 479999999999998886543333333322 4789999999999
Q ss_pred CCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 046900 280 LGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK 359 (442)
Q Consensus 280 ~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 359 (442)
||+||+|+||+++ ++.+.+.+.+....+.++.++|.++.+++...+ .+.+ ..+.+.++++.+.+.|++.|+.+.+
T Consensus 218 ~g~~GlRiG~~v~-~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~~~~---~~~~-~~~~~~~~r~~~~~~L~~~~~~~~~ 292 (352)
T PRK03321 218 YGLAGLRVGYAVG-HPEVIAALRKVAVPFSVNSLAQAAAIASLAAED---ELLE-RVDAVVAERDRVRAALRAAGWTVPP 292 (352)
T ss_pred hhhHHHhhhhhcC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHH---HHHH-HHHHHHHHHHHHHHHHHHCCCccCC
Confidence 9999999999999 567777777666667789999998888887533 2333 3344456678899999988877644
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
.+|+|+|++++. +..++++.|.+ +||.+.+ |+ ..++||+++. .+++++++++|.+++.
T Consensus 293 -~~g~~i~i~l~~--------~~~~~~~~l~~-~gI~v~~---~~---~~~iRi~~~~--~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 293 -SQANFVWLPLGE--------RTADFAAAAAE-AGVVVRP---FA---GEGVRVTIGA--PEENDAFLRAARAWRA 350 (352)
T ss_pred -CCCCEEEEeCCC--------CHHHHHHHHHH-CCEEEEc---cC---CCcEEEeeCC--HHHHHHHHHHHHHHhc
Confidence 457899999853 25678888755 5999987 43 3469999975 7889999999998754
No 98
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.2e-43 Score=338.36 Aligned_cols=308 Identities=20% Similarity=0.315 Sum_probs=240.1
Q ss_pred CCCCCCCceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 42 EESTNPSGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 42 ~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
+.+.++.++|+|+.++|+++++.+.+.+.+... ....|+. ...||++++++++ +
T Consensus 2 ~~~~~~~~~i~l~~~~np~~p~~~~~a~~~~~~------------~~~~yp~---~~~l~~~ia~~~~-----------~ 55 (311)
T PRK08354 2 HGGIREEGLIDFSASVNPYPPEWLDEMFERAKE------------ISGRYTY---YEWLEEEFSKLFG-----------E 55 (311)
T ss_pred CCCCCccceeEecCCCCCCCCHHHHHHHHHHHH------------HhhcCCC---hHHHHHHHHHHHC-----------C
Confidence 445678899999999999977766666655421 1345764 3679999998863 4
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
+|++|+|+++++.+++..+ .+||.|++++|+|+.|...++. .|++++.++ +|++.+++.++ ++
T Consensus 56 ~I~vt~G~~~al~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~-~g~~~~~~~--------~d~~~l~~~~~-------~~ 118 (311)
T PRK08354 56 PIVITAGITEALYLIGILA-LRDRKVIIPRHTYGEYERVARF-FAARIIKGP--------NDPEKLEELVE-------RN 118 (311)
T ss_pred CEEECCCHHHHHHHHHHhh-CCCCeEEEeCCCcHHHHHHHHH-cCCEEeecC--------CCHHHHHHhhc-------CC
Confidence 7999999999999888655 4899999999999999999995 999997754 57888887764 45
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
++++++|||||||.+++.+++++|+++|++++++||+||+|.+|.+++.. . . ++++++++||||.||
T Consensus 119 ~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~-~------~------~~~vi~~~S~SK~~~ 185 (311)
T PRK08354 119 SVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPES-P------E------GENIIKLRTFTKSYG 185 (311)
T ss_pred CEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccc-c------C------CCcEEEEeccHhhcC
Confidence 68999999999999999999999999999999999999999998876421 1 1 378999999999999
Q ss_pred CCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC
Q 046900 282 LPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN 361 (442)
Q Consensus 282 ~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 361 (442)
+||+|+||+++ +.+.++.....+.++...|.++..++++ .+ +++++.++.++++++.+.+.+ ..+++
T Consensus 186 l~GlRiG~~v~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~l~~~l------~~~~~ 252 (311)
T PRK08354 186 LPGIRVGYVKG----FEEAFRSVRMPWSIGSTGYAFLEFLIED-DF--EHLRKTMPLIWREKERFEKAL------YVKSD 252 (311)
T ss_pred Cccceeeeeee----hHHHHHHcCCCccCCHHHHHHHHHHHHh-HH--HHHHHHHHHHHHHHHHHHHhc------CCCCC
Confidence 99999999998 3455666666677788888888888774 22 345566666777776665554 23567
Q ss_pred ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 362 AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 362 ~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
++|++ ++++. +.++++.|.++ ||.|.||+.|+ .++|+||+++. .++.+++++.|+++
T Consensus 253 ~~~~~-~~~~~---------~~~~~~~l~~~-gv~v~~g~~f~--~~~~iRi~~~~--~~~~~~l~~al~~~ 309 (311)
T PRK08354 253 ANFFI-KDVGD---------AEKFVEFLKRN-GILVRDCTSFG--LPGYIRFSVRD--REENEKLIRALREW 309 (311)
T ss_pred CcEEE-EECCC---------HHHHHHHHHHC-CeEEEecccCC--CCCeEEEEeCC--HHHHHHHHHHHHHh
Confidence 76555 66542 46788887665 99999999996 35899999986 55577777777664
No 99
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-43 Score=343.75 Aligned_cols=326 Identities=17% Similarity=0.303 Sum_probs=255.5
Q ss_pred ceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 49 GVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 49 ~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
..++|+.++|+++. +.+.+.+.+.... .....|++. +..+||+++|+|++ +++++|++|+
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~----------~~~~~y~~~-~~~~lr~~ia~~~~--------~~~~~i~it~ 83 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKS----------SQVNIYPDP-TAEKLREELARYCS--------VVPTNIFVGN 83 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhc----------CcccCCCCc-cHHHHHHHHHHHhC--------CCcccEEEec
Confidence 44799999998753 5555555443211 123568765 46999999999974 6789999999
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe
Q 046900 128 GATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT 207 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~ 207 (442)
|+++++..++.+++++||.|++++|+|+.+...++. .|++++.+++++ +|.+|++.+++.+++ .++|+++++
T Consensus 84 G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~~~~~-----~~~k~v~l~ 155 (351)
T PRK14807 84 GSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKI-AGAVEIPVKLKE--DYTYDVGSFIKVIEK-----YQPKLVFLC 155 (351)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHH-cCCeEEEeecCC--CCCCCHHHHHHHhhc-----cCCCEEEEe
Confidence 999999999999999999999999999999888884 999999999874 467999999998863 278999999
Q ss_pred CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee
Q 046900 208 NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV 287 (442)
Q Consensus 208 ~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri 287 (442)
||+||||.+++.+++.++++ +++.++|+||+|.++. +....+ .... .+++|+++||||.||+||+|+
T Consensus 156 ~p~NPtG~~~~~~~l~~l~~---~~~~~~ivDe~y~~~~--~~~~~~---~~~~-----~~~vi~~~S~SK~~~~~GlRi 222 (351)
T PRK14807 156 NPNNPTGSVIEREDIIKIIE---KSRGIVVVDEAYFEFY--GNTIVD---VINE-----FENLIVLRTLSKAFGLAGLRV 222 (351)
T ss_pred CCCCCCCCCCCHHHHHHHHH---hCCCEEEEeCcchhhc--ccchHH---Hhhh-----CCCEEEEecchHhcccchhce
Confidence 99999999999888777765 5567899999998863 322222 2222 478999999999999999999
Q ss_pred EEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEE
Q 046900 288 GTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFC 366 (442)
Q Consensus 288 G~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~ 366 (442)
||+++ ++.+.+.+......+.++.++|.++.+++++. + +++..+.++++|+.+.+.|++. |+.+.+ .+|+|+
T Consensus 223 G~~v~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~----~~~~~~~~~~~r~~l~~~l~~~~g~~~~~-~~~~~~ 295 (351)
T PRK14807 223 GYAVA-NENILKYLNLVKSPYNINSLSQVIALKVLRTG-V----LKERVNYILNERERLIKELSKIPGIKVYP-SKTNFI 295 (351)
T ss_pred eeeec-CHHHHHHHHHccCCCCcCHHHHHHHHHHHhHH-H----HHHHHHHHHHHHHHHHHHHHhCCCcEECc-CCccEE
Confidence 99998 56777777776666778899999999999753 2 3445566788889999999875 777654 456699
Q ss_pred EEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 367 WMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
|++++. ..++++.|+++ ||.|.++..+. ..++++||+++. .++.+++++.|++++
T Consensus 296 ~i~~~~---------~~~~~~~l~~~-gV~v~~~~~~~-~~~~~iRis~~~--~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 296 LVKFKD---------ADYVYQGLLER-GILVRDFSKVE-GLEGALRITVSS--CEANDYLINGLKELL 350 (351)
T ss_pred EEEcCC---------HHHHHHHHHHC-CEEEEECCCCC-CCCCeEEEEcCC--HHHHHHHHHHHHHhh
Confidence 999864 45777777766 99999865432 245799999986 567888888887754
No 100
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-43 Score=326.35 Aligned_cols=345 Identities=19% Similarity=0.244 Sum_probs=271.8
Q ss_pred cccccCCCcchHHHHHHHHHHHH-HHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhc
Q 046900 87 ENALFQDYHGLKSFRQAMASFME-QIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRT 165 (442)
Q Consensus 87 ~~~~Y~~~~g~~~lr~~ia~~l~-~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~ 165 (442)
...+|++..|.++|+.-+.++.. ..+. ......+|++|+|.+.+++.+++.++++||+|+++.++|+.....++ ..
T Consensus 92 ~alQYg~s~G~peLl~fik~h~~~~ih~--p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~-a~ 168 (472)
T KOG0634|consen 92 RALQYGQSSGIPELLLFIKDHNRPTIHA--PPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSME-AL 168 (472)
T ss_pred hhhccccccCcHHHHHHHHHhccccccC--CCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhcc-cc
Confidence 45789999999999999999665 2222 23455699999999999999999999999999999999999999998 49
Q ss_pred CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc---CCceeEEEEeCC--CCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 166 GIKIVPIHCDSSNNFQITPQALEAAYKEAESK---DMRVRGVLITNP--SNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 166 G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~---~~~~~~v~l~~P--~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
|+++++|+++++| +++|.|++.+.++... .+++ .|++|.| +||||..++.+++++|.++|++|+++||+||
T Consensus 169 gv~~ipv~md~~G---i~pE~l~~il~~w~~~~~k~~~p-~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDd 244 (472)
T KOG0634|consen 169 GVKIIPVKMDQDG---IDPESLEEILSNWKPGSYKKPKP-HVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDD 244 (472)
T ss_pred CceEEeccccCCC---CCHHHHHHHHhcCCcccccCCCC-eEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecC
Confidence 9999999998766 9999999999988643 2444 4677777 6999999999999999999999999999999
Q ss_pred cCCcCCCCC--------CCcccHHHHHh----h-hcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc-
Q 046900 241 IYSGSAFSS--------SEFVSIAEILE----A-RQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS- 306 (442)
Q Consensus 241 ~y~~~~~~~--------~~~~s~~~~~~----~-~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~- 306 (442)
.|..+.|+. .+..+...+.. . .+.+..++||.+.||||.++ ||+|+||+.+++..+...+.....
T Consensus 245 pYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~ 323 (472)
T KOG0634|consen 245 PYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVA 323 (472)
T ss_pred ccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhccee
Confidence 999888862 12223112221 1 12244689999999999997 999999999965555555543222
Q ss_pred cCCCcHHHHHHHHHHhcCchh--HHHHHHHHHHHHHHHHHHHHHHHHhC---C-CeeecCCceEEEEEecCCc--ccccC
Q 046900 307 FTLISSQTQYLLASMLSNKKF--TENYIKTNRERLQKRYQMIIEGLRSA---G-IECLKGNAGLFCWMNLSPL--LEEQT 378 (442)
Q Consensus 307 ~~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~---g-~~~~~~~~g~~~~~~~~~~--~~~~~ 378 (442)
..+.|..+|.++-++|..... ..+|+.+.+..|..||..+..+|.+. + .++.+|.+|||+|++++-. .....
T Consensus 324 t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~ 403 (472)
T KOG0634|consen 324 TSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKS 403 (472)
T ss_pred ecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccc
Confidence 234667788888888875321 14899999999999999999999886 4 7788999999999999811 11112
Q ss_pred hhhHHHHHHHHHHcCcEEEeCCCCCCCC-C----CCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 379 REGELALWDSMLHEVKLNISPGSSCHCS-E----PGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 379 ~~~~~~l~~~l~~~~gi~v~pg~~f~~~-~----~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
..+.+++....+.+.||.+.+|+.|... . +-++|++++..+.|+++++++|+..+++++-.
T Consensus 404 i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~ 469 (472)
T KOG0634|consen 404 INQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFI 469 (472)
T ss_pred hHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhh
Confidence 2234455555556669999999999764 2 23899999977899999999999999998754
No 101
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.7e-43 Score=345.22 Aligned_cols=326 Identities=19% Similarity=0.315 Sum_probs=259.2
Q ss_pred CCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|++++|++++ +.+.+.+.+... ....|++..+ +++|+++|+|++ +++++|++
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~~ 91 (361)
T PRK00950 33 PESIIKLGSNENPLGPSPKAVEAIEKELS------------KIHRYPEPDA-PELREALSKYTG--------VPVENIIV 91 (361)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHHHHH------------hhcCCCCCCH-HHHHHHHHHHhC--------CCHHHEEE
Confidence 4588999999998753 444444443321 1346877644 999999999975 67899999
Q ss_pred -ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 126 -TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 126 -t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
|+|+++++..++.+++++||.|+++.|+|+.+...++. .|++++.++.+ ++|.+|++.+++.+.+ +++++
T Consensus 92 ~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~-~g~~~~~~~~~--~~~~~~~~~l~~~~~~------~~~~v 162 (361)
T PRK00950 92 GGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKA-HGAKPVYAKRE--EDFSLDVDSVLNAITE------KTKVI 162 (361)
T ss_pred eCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHH-cCCEEEEeecC--CCCCcCHHHHHHHhcc------CCCEE
Confidence 79999999999999999999999999999999888884 89999999854 3577999999988754 67899
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.+++.+++.+|+ +++++++|+||+|.++. +. +...+... .+++++++||||.||+||
T Consensus 163 ~~~~p~nptG~~~~~~~l~~l~---~~~~~~li~De~y~~~~--~~---~~~~~~~~-----~~~vi~~~S~SK~~g~~G 229 (361)
T PRK00950 163 FLCTPNNPTGNLIPEEDIRKIL---ESTDALVFVDEAYVEFA--EY---DYTPLALE-----YDNLIIGRTFSKVFGLAG 229 (361)
T ss_pred EEeCCCCCCCCCcCHHHHHHHH---HHCCcEEEEECchhhhC--cc---chHHHHHh-----cCCEEEEEeehHhhcCch
Confidence 9999999999999977666554 57799999999999865 22 22233332 468999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceE
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGL 364 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~ 364 (442)
+|+||+++ ++.+.+.+++....+.++++.|.++..++.+.++ +++.++.++++|+.+.+.|. +.+. +.+++
T Consensus 230 lRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~----~~~~~~~~~~~r~~l~~~l~---~~~~-~~~~~ 300 (361)
T PRK00950 230 LRIGYGFV-PEWLIDYYMRAKTPFSLTRLSQAAAIAALSDKEY----IEKSIEHGIKSREYLYNELP---FKVY-PSEAN 300 (361)
T ss_pred hhcchhcC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHhhcC---eeEC-CCcce
Confidence 99999999 5666767776666667889999999988876543 56667788888888888875 4544 55678
Q ss_pred EEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 365 FCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
|+|++++.. ++.++++.|.++ ||.+.||..|+..+++++||+++. .++++++++.|++++
T Consensus 301 ~i~~~~~~~-------~~~~~~~~l~~~-gv~v~~~~~f~~~~~~~lRis~~~--~~~~~~l~~~L~~il 360 (361)
T PRK00950 301 FVLVDVTPM-------TAKEFCEELLKR-GVIVRDCTSFRGLGDYYIRVSIGT--FEENERFLEILKEIV 360 (361)
T ss_pred EEEEECCCC-------CHHHHHHHHHHC-CEEEeeCCccCCCCCCeEEEECCC--HHHHHHHHHHHHHHh
Confidence 999998431 367889998776 999999998865556899999985 678999999998875
No 102
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-43 Score=338.49 Aligned_cols=317 Identities=16% Similarity=0.269 Sum_probs=247.3
Q ss_pred CCCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 46 NPSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
.+.++|+|+.++|++++ +.+.+.+.+.... .....|+++ |.++||+++|+|+++. .+++++|+
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~----------~~~~~Y~~~-~~~~Lr~aia~~~~~~-----~~~~~~i~ 80 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNS----------DTLRIYYDS-PDEELIEKILSYLDTD-----FLSKNNVS 80 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhhh----------hhhhcCCCC-ChHHHHHHHHHHhCCC-----CCCcceEE
Confidence 34688999999999864 4455554443211 123457765 8899999999999753 16799999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++.+++.++ |.|++++|+|+.|...++. .|++++.+|++++ +.++... +. +++++
T Consensus 81 it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~~~~~-~g~~~~~v~~~~~--~~~~~~~----~~-------~~~~i 142 (335)
T PRK14808 81 VGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKA-VGAKFLEVPLTKD--LRIPEVN----VG-------EGDVV 142 (335)
T ss_pred EcCCHHHHHHHHHHHh----CcEEECCCCHHHHHHHHHH-cCCeEEEecCCCc--CCCChhH----cc-------CCCEE
Confidence 9999999999999888 6799999999999999995 9999999998753 4444221 11 45799
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++|||||||.+++.+++++|+ +++++||+||+|.+|. +.. ....... .+++++++||||+||++|
T Consensus 143 ~i~nP~NPTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~--~~~---~~~~~~~-----~~~vi~~~S~SK~~~l~G 208 (335)
T PRK14808 143 FIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYEFH--GES---YVDLLKK-----YENLAVIRTFSKAFSLAA 208 (335)
T ss_pred EEeCCCCCCCCCcCHHHHHHHH----hcCCEEEEECchhhhc--CCc---hHHHHHh-----CCCEEEEEechhhccCcc
Confidence 9999999999999999888886 4799999999999964 222 2222232 478999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceE
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGL 364 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~ 364 (442)
+|+||++++ +.+.+.+.+....+.++.++|.++..++.+.+ +..+.++.+.++|+.+.+.|++.|+++.+++|+
T Consensus 209 lRvG~~v~~-~~~~~~l~~~~~~~~~~~~~q~a~~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~g~- 282 (335)
T PRK14808 209 QRIGYVVSS-EKFIDAYNRVRLPFNVSYVSQMFAKVALDHRE----IFEERTKFIVEERERMKSALREMGYRITDSRGN- 282 (335)
T ss_pred cceEEEEeC-HHHHHHHHHhcCCCCCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCe-
Confidence 999999994 56777776666567788999999988887533 355666777888999999999989888877665
Q ss_pred EEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 365 FCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
|+|+.++.. +..++.+.|.++ ||.|+. | ..++||+++. .++++++++.|+++
T Consensus 283 f~~~~l~~~-------~~~~~~~~l~~~-Gi~V~~---~----~~~~Risi~~--~~~~~~~~~~l~~~ 334 (335)
T PRK14808 283 FVFIFMEKE-------EKERLLEHLRAK-NIAVRS---F----REGVRITIGK--REENDMILKELEVF 334 (335)
T ss_pred EEEEeCCCc-------cHHHHHHHHHHC-CeEEEE---C----CCCeEEecCC--HHHHHHHHHHHHhh
Confidence 889998742 245777777666 999995 3 2579999986 67899999888754
No 103
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=5e-43 Score=339.91 Aligned_cols=327 Identities=22% Similarity=0.364 Sum_probs=266.2
Q ss_pred CCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|||++++|+++. +.+.+.+.+.. .....|+++.+ +++|+++|++++ +++++|++
T Consensus 18 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~------------~~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~~ 76 (346)
T TIGR01141 18 GKEVIKLNSNENPFGPPPKAKEALRAEA------------DKLHRYPDPDP-AELKQALADYYG--------VDPEQILL 76 (346)
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHhH------------HHhhcCCCCCH-HHHHHHHHHHhC--------cChHHEEE
Confidence 4689999999988743 44555544432 12356877766 899999999986 57899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++.+++++||+|++++|+|+.+...+.. .|++++.++++++ +.+|++.+++.+.+ ++++|+
T Consensus 77 ~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~-~g~~~~~~~~~~~--~~~d~~~l~~~~~~------~~~~v~ 147 (346)
T TIGR01141 77 GNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAKI-HGAEVVKVPLDED--GQLDLEDILVAIDD------KPKLVF 147 (346)
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHH-cCCeEEEeccCCC--CCCCHHHHHHhcCC------CCCEEE
Confidence 99999999999999999999999999999988877774 8999999998754 57899999987643 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.++++++++.|+ +++++|+||+|+++.+.+ +....... .+++++++|+||.||++|+
T Consensus 148 l~~p~NptG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~----~~~~~~~~-----~~~~i~~~S~sK~~g~~G~ 217 (346)
T TIGR01141 148 LCSPNNPTGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP----STLPLLAE-----YPNLIVLRTLSKAFGLAGL 217 (346)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc----cHHHHHhh-----CCCEEEEehhhHhhhchhh
Confidence 9999999999999999999999887 799999999999765432 12222221 3578999999999998999
Q ss_pred eeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceE
Q 046900 286 RVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGL 364 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~ 364 (442)
|+||+++ ++.+.+.++.....+.+++++|.++..+++... ++++.++.++++++.+.+.|.++ |+++. +.+|+
T Consensus 218 r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~ 291 (346)
T TIGR01141 218 RIGYAIA-NAEIIDALNKVRAPFNLSRLAQAAAIAALRDDD----FIEKTVEEINAERERLYDGLKKLPGLEVY-PSDAN 291 (346)
T ss_pred hceeeec-CHHHHHHHHhccCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCC
Confidence 9999998 566777777766667788999999999988654 46778899999999999999887 88755 44677
Q ss_pred EEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHH
Q 046900 365 FCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIH 431 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~ 431 (442)
|+|++++. ++.++++.|.++ ||.+.||..|+.. ++++|+|++ ++++++++++.|+
T Consensus 292 ~~~~~~~~--------~~~~~~~~L~~~-gI~v~~g~~f~~~-~~~iRls~~--~~~~i~~~~~~l~ 346 (346)
T TIGR01141 292 FVLIRFPR--------DADALFEALLEK-GIIVRDLNSYPGL-PNCLRITVG--TREENDRFLAALR 346 (346)
T ss_pred EEEEecCC--------CHHHHHHHHHHC-CeEEEeCCCcCCC-CCeEEEecC--CHHHHHHHHHHhC
Confidence 99999874 256788888765 9999999988644 789999997 4788999888763
No 104
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=4.7e-43 Score=337.06 Aligned_cols=313 Identities=21% Similarity=0.292 Sum_probs=255.2
Q ss_pred CCceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 47 PSGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.+++++|+.++|+++++... .. ......|+++.+ +++|+.++++++ +++++|++|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~----~~------------~~~~~~y~~~~~-~~lr~~la~~~~--------~~~~~i~~t 70 (330)
T TIGR01140 16 PEDWLDFSTGINPLGPPVPP----IP------------ASAWARYPDPEY-DELRAAAAAYYG--------LPAASVLPV 70 (330)
T ss_pred hhheeEccccCCCCCCChhh----cc------------hHHHhhCCCccH-HHHHHHHHHHhC--------CChhhEEEC
Confidence 45679999999988765211 11 123567988776 999999999974 568999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++..+..++ .+| .|++++|+|..+...++ ..|++++.++ |++.+++.++ +++++++
T Consensus 71 ~G~~~~i~~~~~~l-~~g-~vl~~~p~y~~~~~~~~-~~g~~~~~~~---------d~~~l~~~~~-------~~~~v~i 131 (330)
T TIGR01140 71 NGAQEAIYLLPRLL-APG-RVLVLAPTYSEYARAWR-AAGHEVVELP---------DLDRLPAALE-------ELDVLVL 131 (330)
T ss_pred CCHHHHHHHHHHHh-CCC-eEEEeCCCcHHHHHHHH-HcCCEEEEeC---------CHHHHHhhcc-------cCCEEEE
Confidence 99999999987664 677 69999999999999888 4999999887 6788888773 5678999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
++|+||||.+++.+++++|+++|+++|++||+||+|.++.+. .++..+.. ..+++++++||||.||++|+|
T Consensus 132 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~----~~~~~~~~-----~~~~~i~~~S~SK~~g~~G~R 202 (330)
T TIGR01140 132 CNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD----ASLAPQAA-----RFPGLVVLRSLTKFFGLAGLR 202 (330)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc----cchhhHhc-----cCCCEEEEEecchhhcCchhh
Confidence 999999999999999999999999999999999999987653 13333322 147899999999999999999
Q ss_pred eEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCceEE
Q 046900 287 VGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECLKGNAGLF 365 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~ 365 (442)
+||+++ ++.+.+.+......+.+++++|.++..++++.++ .++.++.++++++.+.+.|++.+ +++. +.+|+|
T Consensus 203 ~G~i~~-~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f 276 (330)
T TIGR01140 203 LGFVVA-HPALLARLREALGPWTVNGPARAAGRAALADTAW----QAATRARLAAERARLAALLARLGGLEVV-GGTALF 276 (330)
T ss_pred hhheeC-CHHHHHHHHhcCCCCCchHHHHHHHHHHHhchHH----HHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeE
Confidence 999999 4567777777766677889999999999987654 45678899999999999999986 5554 557899
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRI 430 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l 430 (442)
+|++++. ..+++++|+++ ||.+.||..|+....+++||++++ +.++ ++++++|
T Consensus 277 ~~~~~~~---------~~~l~~~l~~~-gi~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l 329 (330)
T TIGR01140 277 LLVRTPD---------AAALHEALARR-GILIRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL 329 (330)
T ss_pred EEEEcCC---------HHHHHHHHHHC-CEEEEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence 9998764 45788998876 999999999964456799999987 4444 7777665
No 105
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-42 Score=334.97 Aligned_cols=317 Identities=18% Similarity=0.285 Sum_probs=246.2
Q ss_pred CceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|+|+.++|+++. +.+.+.+.+.... .....|++ .|.++||+++|+|++ +++++|++|
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~Y~~-~g~~~lr~~ia~~~~--------~~~~~I~~t 78 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKR----------VPFNRYPH-ITSDPLREAIAEFYG--------LDAENIAVG 78 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhc----------CccccCCC-CCHHHHHHHHHHHhC--------cCcceEEEc
Confidence 367999999998753 4444444433211 12457875 699999999999985 679999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++..++..+ +||+|+++.|+|+.|...++. .|++++.+++++ +|.+|++.+++.+. +++++++
T Consensus 79 ~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~~~~-------~~~~v~~ 146 (337)
T PRK03967 79 NGSDELISYLVKLF--EGKHIVITPPTFGMYSFYAKL-NGIPVIDVPLKE--DFTIDGERIAEKAK-------NASAVFI 146 (337)
T ss_pred CCHHHHHHHHHHHh--CCCeEEEeCCChHHHHHHHHH-cCCeEEEeecCC--CCCcCHHHHHHhcc-------CCCEEEE
Confidence 99999999998877 799999999999998887774 999999999874 47799999987642 6788999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
+|||||||.+++.+++.+++ +++++||+||+|.++. +. +....... .+++|+++||||.||+||+|
T Consensus 147 ~~P~NPtG~~~~~~~l~~i~----~~~~~ii~De~y~~~~--~~---~~~~~~~~-----~~~vi~l~S~SK~~~l~GlR 212 (337)
T PRK03967 147 CSPNNPTGNLQPEEEILKVL----ETGKPVVLDEAYAEFS--GK---SLIGLIDE-----YPNLILLRTFSKAFGLAGIR 212 (337)
T ss_pred eCCCCCCCCCCCHHHHHHHH----hcCCEEEEECchhhhc--cc---chHHHHhh-----CCCEEEEecchHhhcchhhh
Confidence 99999999999987766654 3699999999999865 22 22222222 36899999999999999999
Q ss_pred eEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEE
Q 046900 287 VGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFC 366 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~ 366 (442)
+||+++ ++.+.+.+.+....+.++.++|.++..++++.++ ..+.++.+.++|+.+.+.|.+. ..+.+++|+
T Consensus 213 iG~iv~-~~~~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~ 283 (337)
T PRK03967 213 AGYAIA-NEEIIDALYRIKPPFSLNILTMKIVRLALDHYDL----IEERIDYIIKERERVRRELGEY----AYPSDANFL 283 (337)
T ss_pred heeeec-CHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHHHhccC----cCCCCCcEE
Confidence 999999 5667777777666777899999999999986543 3444555667788888888754 246788899
Q ss_pred EEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 367 WMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
|++++ +++.|+++ ||.|+++.. ...+++||+++. .++.+++++.|+++.+.+
T Consensus 284 ~~~~~-------------~~~~l~~~-gi~v~~~~~---~~~~~~Ri~~~~--~~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 284 LLKLD-------------AYDYLLEN-GIVVRKLSG---RLEGHIRVTVGK--REENDEFIKALKEIKEGY 335 (337)
T ss_pred EEhHH-------------HHHHHHHC-CEEEEeCCC---CCCCeEEEecCC--HHHHHHHHHHHHHHHHhc
Confidence 98752 45677666 999998653 235799999986 567888888888876654
No 106
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-39 Score=291.49 Aligned_cols=343 Identities=22% Similarity=0.351 Sum_probs=273.3
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC-CCCeEEEcCCCCcChHHhHhhhc
Q 046900 87 ENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD-PGDALLVPTPYYPGFDRDLRWRT 165 (442)
Q Consensus 87 ~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~-~gd~Vl~~~p~y~~~~~~~~~~~ 165 (442)
....|.+.+|.+-+|+.+|+|+.++.| ++++|++|++|.|++.++..++..|+. +.+.|++|.|.|+.|...+.. +
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG--~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l-~ 181 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDG--IPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISL-L 181 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccC--CCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHH-h
Confidence 356799999999999999999999987 779999999999999999999988854 678999999999999999996 8
Q ss_pred CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 166 GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 166 G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
|...+++.++++.+|.+|.++|++.+.++. ++.+++++++.||.||||.+++++.+++|+.+|.+++++++.||+|.+.
T Consensus 182 ~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~N 260 (475)
T KOG0258|consen 182 GGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDN 260 (475)
T ss_pred CCcccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhh
Confidence 999999999999999999999999999987 7789999999999999999999999999999999999999999999999
Q ss_pred CCCCC-CcccHHHHHhhhcCCCCC--cEEEEecCccc-CCCCCceeEEEee--cCHHHHHHHHHccccCCCc-HHHHHHH
Q 046900 246 AFSSS-EFVSIAEILEARQYKDSE--RVHIVYSLSKD-LGLPGFRVGTIYS--YNDKVVTTARRMSSFTLIS-SQTQYLL 318 (442)
Q Consensus 246 ~~~~~-~~~s~~~~~~~~~~~~~~--~vi~~~S~SK~-~g~~G~RiG~i~~--~~~~~~~~~~~~~~~~~~s-~~~q~~~ 318 (442)
+|... .|+|+.....+++....+ .++.++|.||. +|-.|.|-||+-. ..+.+...+.+..+...++ ...|...
T Consensus 261 vy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~v 340 (475)
T KOG0258|consen 261 VYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLV 340 (475)
T ss_pred ccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhh
Confidence 99754 899999988876532223 44557899999 5788999999743 3455555555444432233 3455555
Q ss_pred HHHhcCc-----hh--HHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCCccc------ccChhhHHH
Q 046900 319 ASMLSNK-----KF--TENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSPLLE------EQTREGELA 384 (442)
Q Consensus 319 ~~~l~~~-----~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~ 384 (442)
..+...+ .+ ..+..+.....++++.+.+.+.++.. |+.|.+++|.||++..+.-..+ ......+.-
T Consensus 341 dl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~F 420 (475)
T KOG0258|consen 341 DLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEF 420 (475)
T ss_pred ceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHH
Confidence 4444421 11 12224456788899999999999987 9999999999999876542211 111223566
Q ss_pred HHHHHHHcCcEEEeCCCCCCCCC-CCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 385 LWDSMLHEVKLNISPGSSCHCSE-PGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 385 l~~~l~~~~gi~v~pg~~f~~~~-~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.|.+||+.+||+++||+.|+... ..++|.++-. .. + +.+++++++-.+.
T Consensus 421 Yc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp--~~-~-~~i~~~~~fH~~f 470 (475)
T KOG0258|consen 421 YCLKLLEATGICVVPGSGFGQKEGTYHFRTTILP--PG-L-EIIEKFKKFHAEF 470 (475)
T ss_pred HHHHHHHhcCeEEecCCCCCCCCceeEEEEeecC--ch-h-HHHHHHHHHHHHH
Confidence 78899999999999999999643 3469998864 33 4 7788888776554
No 107
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-36 Score=266.38 Aligned_cols=372 Identities=19% Similarity=0.289 Sum_probs=271.6
Q ss_pred hhhhhhcCCCCCCCCCCceeeeecccccccHHHHHHHHH----hCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHH
Q 046900 32 GWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLE----QQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASF 107 (442)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 107 (442)
+...+..+..+.-+. ++.|.|+-+. +.-.+.+.++.. +..... +..+..++|..++|...|.++++..
T Consensus 15 Gi~~lMdDl~d~Lrt-~g~imLggGN-Pa~iPem~~~f~~~~aemla~~------~~~e~~cnY~~pQG~~~li~ala~~ 86 (417)
T COG3977 15 GITQLMDDLNDGLRT-PGAIMLGGGN-PARIPEMDDYFQDLLAEMLASG------KATEALCNYDGPQGKAVLIDALAKM 86 (417)
T ss_pred hHHHHHHHHHhhccC-CCceeeCCCC-cccChhHHHHHHHHHHHHHhcc------hHHHHHhcCCCCcchhHHHHHHHHH
Confidence 444555554333333 3578888774 433333333322 222110 1123467899999999999999999
Q ss_pred HHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC---CC--CeEEEc-CCCCcChHHhHhhhcCcEEEEE----ecCCC
Q 046900 108 MEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD---PG--DALLVP-TPYYPGFDRDLRWRTGIKIVPI----HCDSS 177 (442)
Q Consensus 108 l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~---~g--d~Vl~~-~p~y~~~~~~~~~~~G~~v~~v----~~~~~ 177 (442)
+++.+| +.+++.||.+|+|++.+.+.++..|.. .| ..|++| .|.|.+|..+... -.+ .|.+ .+.++
T Consensus 87 l~~~yg--wnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~-~d~-fVs~kP~iel~~~ 162 (417)
T COG3977 87 LRREYG--WNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLE-EDL-FVSAKPNIELLPA 162 (417)
T ss_pred HHHHhC--CCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccC-ccc-eeeccCCcccccc
Confidence 999988 557899999999999999999988843 34 356665 8999998876432 221 1211 12233
Q ss_pred C--CCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccH
Q 046900 178 N--NFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSI 255 (442)
Q Consensus 178 ~--~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~ 255 (442)
+ .|.+|.++|.-. .++.+|+++-|.||||.+++.+++.+|..+|++||+++|+|.+|+.- |.+-.+..+
T Consensus 163 g~FKY~vDF~~l~i~--------e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~P-FP~iifsd~ 233 (417)
T COG3977 163 GQFKYHVDFEHLHIG--------ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVP-FPGIIFSDA 233 (417)
T ss_pred cceeeccCHHHcccc--------cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCC-CCceecccc
Confidence 3 467788777642 37888999999999999999999999999999999999999999841 111111111
Q ss_pred HHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHH
Q 046900 256 AEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIK 333 (442)
Q Consensus 256 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~ 333 (442)
.-+ -.+|++.+.|+|| .|+||.|+|.+++ ++.+++++.++... ...+...++.++.++++++..+---.
T Consensus 234 ~~~-------w~~NiilC~SLSK-~GLPG~R~GIiIa-ne~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseq 304 (417)
T COG3977 234 TPL-------WNENIILCMSLSK-LGLPGSRCGIIIA-NEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQ 304 (417)
T ss_pred ccc-------CCCCEEEEeehhh-cCCCCcceeEEEc-cHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHH
Confidence 111 1479999999999 5899999999999 88899888877665 34456788999999999886432222
Q ss_pred HHHHHHHHHHHHHHHHHHhC----CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCC-
Q 046900 334 TNRERLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEP- 408 (442)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~- 408 (442)
-.+-.|+++.+...+.|++. -+.+++|+|..|+|+-+.+.+- +.++++++|.++ ||++.||+.|++.-+
T Consensus 305 VIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPI-----tt~~LYq~LKa~-Gvl~VPG~~FFpGl~~ 378 (417)
T COG3977 305 VIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPI-----TTEELYQRLKAR-GVLMVPGHYFFPGLDK 378 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCC-----CHHHHHHHHHhC-eEEEecccccCCCCCC
Confidence 34667777777777777664 5667899999999998877644 478999999776 999999999986422
Q ss_pred ------CEEEEEeecCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 409 ------GWFRVCFANMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 409 ------~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
.++|+++.. +++.++.++++|.+.+++.-++
T Consensus 379 ewpH~hqC~Rmn~~~-~~~~ie~Gva~lae~ve~~yq~ 415 (417)
T COG3977 379 EWPHTHQCMRMNYVP-EPEKIEKGVAILAEEVERAYQE 415 (417)
T ss_pred CCCCccceEEEecCC-CHHHHHHHHHHHHHHHHHHHhc
Confidence 479999987 7889999999999999886554
No 108
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=6.9e-35 Score=283.10 Aligned_cols=318 Identities=30% Similarity=0.519 Sum_probs=255.0
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCc
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGI 167 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~ 167 (442)
...|++..|..++++.++++++..++ ....++++++++|+++++..++.++.++||+|+++.|+|..+...++. .|.
T Consensus 29 ~~~~~~~~~~~~l~~~l~~~l~~~~~--~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~-~~~ 105 (350)
T cd00609 29 LLGYYPDPGLPELREAIAEWLGRRGG--VDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARL-AGA 105 (350)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHH-CCC
Confidence 35677888999999999999998765 245678999999999999999999999999999999999999999985 999
Q ss_pred EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCC
Q 046900 168 KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAF 247 (442)
Q Consensus 168 ~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~ 247 (442)
+++.++.++.+.+..+.+.++.... .+++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+
T Consensus 106 ~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~ 179 (350)
T cd00609 106 EVVPVPLDEEGGFLLDLELLEAAKT------PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVY 179 (350)
T ss_pred EEEEEecccccCCccCHHHHHhhcC------ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhcee
Confidence 9999999876544433244444332 3789999999999999999999999999999999999999999998776
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCc
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNK 325 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~ 325 (442)
.+......... ...+.+++++|+||.++++|+|+||++++++.+.+.++..... +..+...|.++..++...
T Consensus 180 ~~~~~~~~~~~------~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 253 (350)
T cd00609 180 DGEPPPALALL------DAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDG 253 (350)
T ss_pred CCcccccccCc------CccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCc
Confidence 55432111111 1246789999999999889999999999554677776654444 567788888888888865
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCee-ecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCC
Q 046900 326 KFTENYIKTNRERLQKRYQMIIEGLRSAGIEC-LKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCH 404 (442)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~ 404 (442)
. ++.++.++.+.++++++.+.|++.+... ..+.+|+++|++++... ..+.+.++++++||.+.++..|.
T Consensus 254 ~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~l~~~gi~i~~~~~~~ 323 (350)
T cd00609 254 E---EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGD-------DEEFLERLLLEAGVVVRPGSAFG 323 (350)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCC-------hHHHHHHHHHhCCEEEecccccc
Confidence 3 4577888999999999999999875543 56788899999987631 23445555667799999998886
Q ss_pred CCCCCEEEEEeecCCHHHHHHHHHHHH
Q 046900 405 CSEPGWFRVCFANMSEQTLEVALKRIH 431 (442)
Q Consensus 405 ~~~~~~iRls~~~~~~e~i~~~l~~l~ 431 (442)
...+.++|++++.. ++++++++++|+
T Consensus 324 ~~~~~~iRi~~~~~-~~~i~~~~~al~ 349 (350)
T cd00609 324 EGGEGFVRLSFATP-EEELEEALERLA 349 (350)
T ss_pred cCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence 54567999999984 899999999886
No 109
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-35 Score=255.01 Aligned_cols=306 Identities=19% Similarity=0.295 Sum_probs=243.1
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcE
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIK 168 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~ 168 (442)
.|++++. ..++.++++- -++++|+|+++.|+.+.|++++++.+.|| ++|+.-.|+|..|.-.+.. .+++
T Consensus 65 ~~~d~rn-k~ls~a~~~d--------kpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~i-Nd~e 134 (375)
T KOG0633|consen 65 VYPDPRN-KRLSDALAQD--------KPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAI-NDAE 134 (375)
T ss_pred ccCCccc-chhhhhcccC--------CCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeec-CCce
Confidence 3555543 5566665542 34789999999999999999999999999 8999999999999888875 8999
Q ss_pred EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 169 v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
|+.+|+.. +|+++.|++.+.++. +..+|.+++++|+||||..++.+++.+|++.-. |.+||+||+|.+|.
T Consensus 135 Vvkvpl~p--dF~lnvdai~evl~~----ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFs-- 204 (375)
T KOG0633|consen 135 VVKVPLNP--DFSLNVDAIAEVLEL----DSKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFS-- 204 (375)
T ss_pred EEEecCCC--CccccHHHHHHHHhc----cccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeec--
Confidence 99999987 789999999999875 347899999999999999999999999998554 78999999999954
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhH
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFT 328 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 328 (442)
+. .|-..+..+ ++|++++.+|||.||++|+|+||... +..+.+.+.+...++.+|.+...++.+++++..
T Consensus 205 g~--~S~~~lV~k-----YpNLivlqTlSKsfGLAGiRvG~~~~-~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n-- 274 (375)
T KOG0633|consen 205 GV--ESRMKLVKK-----YPNLIVLQTLSKSFGLAGIRVGYGAF-PLSIAEILNRAKAPYNISVAGSVAALAALSDSN-- 274 (375)
T ss_pred cc--cccchHhHh-----CCceeehhhhhhhcCcceeEeecccc-cHHHHHHHHhccCCccccchhHHHHHHhcCccc--
Confidence 41 244455654 79999999999999999999999998 677889999999998899988888888888543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeC-CCCCCC
Q 046900 329 ENYIKTNRERLQKRYQMIIEGLRSA-GIE-CLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISP-GSSCHC 405 (442)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~p-g~~f~~ 405 (442)
.+.++..++.+.+.|.++...|.+. ++. +..+.-..|+.+++.+... .-+..++.+++.+.||.|+- |+.-
T Consensus 275 ~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n----~~akkly~q~at~~gVvVRfrgse~-- 348 (375)
T KOG0633|consen 275 GKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDN----GMAKKLYKQDATKMGVVVRFRGSEE-- 348 (375)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCc----HHHHHHHHHHHHhcceEEEEcCCcc--
Confidence 3457788899999999999999876 332 2223333488888875422 12566777777777999983 2211
Q ss_pred CCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 406 SEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 406 ~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
...|++||+.++ +|+..-+++.++++
T Consensus 349 ~c~G~lRitvGt--~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 349 GCKGYLRITVGT--PEENTVLMKCLKQF 374 (375)
T ss_pred ccceeEEEEcCC--cccchHHHHHHHhh
Confidence 235899999996 55677778877765
No 110
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=1.5e-34 Score=286.86 Aligned_cols=318 Identities=16% Similarity=0.216 Sum_probs=239.7
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcE
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIK 168 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~ 168 (442)
..|++..|.++||++++++++ .++|++|+|+++++.+++.++++||| |++++|.|+.+...+.. .|++
T Consensus 72 ~~Y~~~~g~~~Lreaia~~~~----------~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~-~G~~ 139 (460)
T PRK13238 72 EAYAGSRSYYRLEDAVKDIFG----------YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIEL-NGAT 139 (460)
T ss_pred cccCCCCCHHHHHHHHHHHhC----------CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHH-cCCE
Confidence 579999999999999999986 35799999999999999999999999 99999999999988885 9999
Q ss_pred EEEEecCCC------CCCc--CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCC-cCCCHHHHHHHHHHHHhcCcEEEEe
Q 046900 169 IVPIHCDSS------NNFQ--ITPQALEAAYKEAESKDMRVRGVLITNPSNPLG-ATIQRSVLEELLDFATRKNIHLVSD 239 (442)
Q Consensus 169 v~~v~~~~~------~~~~--~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG-~~~~~~~l~~l~~~~~~~~~~vi~D 239 (442)
++.+++++. ++|. +|++.|++.+++.. ..++++|++++|+|||| .+++.+++++|.++|++||++||+|
T Consensus 140 ~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~--~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~D 217 (460)
T PRK13238 140 AVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG--AENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVID 217 (460)
T ss_pred EEEEeccccccccccccccCCcCHHHHHHHHhhcC--CCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 999998642 3565 99999999997521 13689999999999997 9999999999999999999999999
Q ss_pred ccCC--cCCCC-----CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee------EEEeecCHHHHHHHHHcc-
Q 046900 240 EIYS--GSAFS-----SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV------GTIYSYNDKVVTTARRMS- 305 (442)
Q Consensus 240 e~y~--~~~~~-----~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri------G~i~~~~~~~~~~~~~~~- 305 (442)
+++. ...|. +....++.++.. .+.|++|.+.++|+|+ |+++++++.+.+.++...
T Consensus 218 aa~~~e~a~f~~~~e~g~~~~si~~i~~-----------~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~ 286 (460)
T PRK13238 218 AARFAENAYFIKQREPGYKDKSIKEIAR-----------EMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCI 286 (460)
T ss_pred CcchhhhhhhhhhccccccCCCHHHHhh-----------hhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhccc
Confidence 9763 23332 123445554432 2355556555555554 466665566776666542
Q ss_pred ------ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccC-
Q 046900 306 ------SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQT- 378 (442)
Q Consensus 306 ------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~- 378 (442)
+++..+...|.+++..+.... .+.++..+ .+++++|.+.|.+.|+++..|.||+|+++++........
T Consensus 287 ~~~g~~t~~g~~~~~~~Ala~~l~e~~-~~~~~~~~----~~~~~~l~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~ 361 (460)
T PRK13238 287 LYEGFPTYGGLAGRDMEALAVGLYEGM-DEDYLAYR----IGQVEYLGEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPA 361 (460)
T ss_pred ccCCcccccCcHHHHHHHHHhhHHHhh-ChHHHHHH----HHHHHHHHHHHHHCCCCeEccCCceEEEEEchhcCCCCCC
Confidence 223345556777776665311 02233333 335799999999999999999999999999976432110
Q ss_pred -hhhHHHHHHHHHHcCcEEEeCCCCCCCCC-----------CCEEEEEeec--CCHHHHHHHHHHHHHHHHH
Q 046900 379 -REGELALWDSMLHEVKLNISPGSSCHCSE-----------PGWFRVCFAN--MSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 379 -~~~~~~l~~~l~~~~gi~v~pg~~f~~~~-----------~~~iRls~~~--~~~e~i~~~l~~l~~~l~~ 436 (442)
...+.+++.+|++++||.+.|++.|..+. ..++||++.. .+.++++.+.++|+++.++
T Consensus 362 ~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 362 EQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred CCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 01257899999999999999999886432 3689999972 3789999999999987643
No 111
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=3.2e-32 Score=261.66 Aligned_cols=287 Identities=12% Similarity=0.117 Sum_probs=210.6
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEc---CCCCcChHHhHhhhcCcEEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVP---TPYYPGFDRDLRWRTGIKIVPI 172 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~---~p~y~~~~~~~~~~~G~~v~~v 172 (442)
|..++.+++.+.+.+++| ++++++++++|+++++..++.+|+++||.|+++ .|+|+.|...++. .|++++.+
T Consensus 51 g~~~~~~~Le~~lA~~~g----~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l-~ga~~~~~ 125 (346)
T TIGR03576 51 GPAIFEEKVQELGREHLG----GPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKL-AGAEYFES 125 (346)
T ss_pred CCHHHHHHHHHHHHHHcC----CCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHH-cCCEEecc
Confidence 444555555555544444 578999999999999999999999999999975 5799999888885 89886432
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
.|++.++. . .++++|++ +++||+|.+++.+++++|+++|++++++||+||+|+.++.+....
T Consensus 126 ---------~~l~~l~~-~-------~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~ 187 (346)
T TIGR03576 126 ---------DELSELKK-I-------DGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQ 187 (346)
T ss_pred ---------CCHHHHhh-C-------cCceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCC
Confidence 13444322 1 25677766 467999999999999999999999999999999999865321111
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccC--CCcHHHHHHHHHHhcCchhHHH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT--LISSQTQYLLASMLSNKKFTEN 330 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~ 330 (442)
.+.... +..++++|||| +++|+|+||+++ ++.+.+.+.+...++ .++++.|.++.+.|+...
T Consensus 188 ~~~~~~---------~~divv~s~SK--alaG~r~G~v~~-~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~---- 251 (346)
T TIGR03576 188 PPALDL---------GADLVVTSTDK--LMDGPRGGLLAG-RKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFE---- 251 (346)
T ss_pred CCHHHc---------CCcEEEeccch--hccccceEEEEe-CHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhcc----
Confidence 122221 12266789999 468999999999 566777777655442 357888888888886532
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCE
Q 046900 331 YIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGW 410 (442)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~ 410 (442)
.+..++.++++++++.+.+.+ +.+.++++| |+|++++.. ++.+++..+++++||.++||+.|. ..++|
T Consensus 252 -~~~~~~~l~~r~~~~~~~l~~--~~~~~~~~~-f~~~~~~~~-------~~~~~~~~ll~~~gV~v~~~~~f~-~~~~~ 319 (346)
T TIGR03576 252 -LSRIRDAFKRKEEVYLRLFDK--LNVERTPTG-FVIKGVEEE-------KLIEIGLDLLRNYGIITITAVGMP-GASKT 319 (346)
T ss_pred -HHHHHHHHHHHHHHHHHHHHh--CCCCcCCCe-EEEEeCCCC-------CHHHHHHHHHHhCCEEEeCCcccC-CCCCe
Confidence 245677888888888888874 455555666 899998742 134667788888899999999884 34689
Q ss_pred EEEEeecCCHH---HHHHHHHHHHHHH
Q 046900 411 FRVCFANMSEQ---TLEVALKRIHNFM 434 (442)
Q Consensus 411 iRls~~~~~~e---~i~~~l~~l~~~l 434 (442)
+|||++. +++ +++.+++.|++-+
T Consensus 320 vRis~~~-~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 320 LRFDLAA-KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred EEEEEec-ChHHhcCHHHHHHHHHhcc
Confidence 9999997 554 6888888887643
No 112
>PRK10534 L-threonine aldolase; Provisional
Probab=100.00 E-value=1.7e-31 Score=257.65 Aligned_cols=324 Identities=17% Similarity=0.199 Sum_probs=223.4
Q ss_pred eeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecCh
Q 046900 50 VIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGA 129 (442)
Q Consensus 50 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~ 129 (442)
+|||++++|+.|.+.+.+.+.+... ....|++..+..+|++++|++++ .+.+++++|+
T Consensus 1 ~~~~~~~~~~~p~~~~~~a~~~~~~------------~~~~Y~~~~~~~~L~~~la~~~g----------~~~~~v~~~g 58 (333)
T PRK10534 1 MIDLRSDTVTRPSRAMLEAMMAAPV------------GDDVYGDDPTVNALQDYAAELSG----------KEAALFLPTG 58 (333)
T ss_pred CcccccccCCCCCHHHHHHHHhccC------------CCcccCCCHHHHHHHHHHHHHhC----------CCeEEEeCch
Confidence 4799999999987877777765432 23468555578999999999975 2344688888
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcC-hHHh-HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe
Q 046900 130 TAANELLTFILADPGDALLVPTPYYPG-FDRD-LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT 207 (442)
Q Consensus 130 ~~ai~~~~~~l~~~gd~Vl~~~p~y~~-~~~~-~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~ 207 (442)
++++.+++.+++.+||.|+++.|+|.. |... +....+++++.++.++ +|.+|+++|++++.+...+..++++|++|
T Consensus 59 ~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~ 136 (333)
T PRK10534 59 TQANLVALLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLE 136 (333)
T ss_pred HHHHHHHHHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEe
Confidence 888888888889999999999888853 3321 2321337778887753 57899999999885311111257899999
Q ss_pred CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee
Q 046900 208 NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV 287 (442)
Q Consensus 208 ~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri 287 (442)
||+ ||.+++.+++++|+++|++++++||+||+|...... ....+...+... .++++ .||||.||++ +
T Consensus 137 np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~-~~~~~~~~~~~~-----~~~~~--~s~SK~~~~~---~ 203 (333)
T PRK10534 137 NTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVV-AYGCELKEITQY-----CDSFT--ICLSKGLGTP---V 203 (333)
T ss_pred cCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHH-HcCCCHHHHHhc-----CCEEE--EEeEcCCCCc---c
Confidence 766 599999999999999999999999999998721100 001123333221 13333 4899998854 6
Q ss_pred E-EEeecCHHHHHHHHHccccCC----CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 288 G-TIYSYNDKVVTTARRMSSFTL----ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 288 G-~i~~~~~~~~~~~~~~~~~~~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
| |+++ ++.+.+.+++....+. .+.+.|.++...+++ .. +..+...++|+++.+.|++.|+++.+|+
T Consensus 204 G~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~------~~-~~~~~~~~~r~~l~~~L~~~g~~~~~~~- 274 (333)
T PRK10534 204 GSLLVG-NRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKH------NV-ARLQEDHDNAAWLAEQLREAGADVMRQD- 274 (333)
T ss_pred cceEEc-CHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh------hH-HHHHHHHHHHHHHHHHHHhCCCccCCCC-
Confidence 8 5777 6677777766554322 223455555554432 11 2222344567899999999999888775
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~ 435 (442)
++|+|++++.. +..++.+.|.++ ||.++||. ++|++.. .++++++++++++|++++.
T Consensus 275 ~nfv~~~~~~~-------~~~~~~~~l~~~-gi~v~~~~--------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 275 TNMLFVRVGEE-------QAAALGEYMRER-NVLINASP--------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred ceEEEEECCch-------hHHHHHHHHHHc-CeeecCCc--------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 67999998741 245666666555 99999863 4788764 3489999999999998764
No 113
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=2e-30 Score=256.50 Aligned_cols=346 Identities=17% Similarity=0.111 Sum_probs=234.7
Q ss_pred CCCceeeeeccc-ccc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcE
Q 046900 46 NPSGVIQMGLAE-NQV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRI 123 (442)
Q Consensus 46 ~~~~~i~l~~~~-n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i 123 (442)
...++|||+.+. ..+ +++.+.+.+.+..... + .....|....|..++++++++++.+.++ . +++|
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~----~----~~~~~~~~~~G~~~l~~~l~~~la~~~g----~-~~~i 106 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSH----G----FGMASVRFICGTQDLHKELEEKLAKFLG----T-EDAI 106 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHc----C----CCCcccccccCCcHHHHHHHHHHHHHhC----C-CcEE
Confidence 356789999875 233 2344444333322110 0 0012233346888999999999998766 2 3778
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
++|+| ++++..++.+++++||.|++++|+|+.+...+.. .|++++.++. .|++.+++.+++......++++
T Consensus 107 ~~tsG-~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~-~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~ 177 (397)
T PRK06939 107 LYSSC-FDANGGLFETLLGKEDAIISDALNHASIIDGVRL-CKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKL 177 (397)
T ss_pred EEcCh-HHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHh-cCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeE
Confidence 88888 7788888999999999999999999999888885 8998887763 4788999888754322335666
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
|+..+.+||||...+ +++|+++|++|+++||+||+|+...+.... .+...... ...+.+++++||||.++
T Consensus 178 v~~~~v~~~~G~~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~-~~~~~~~~----~~~~~~i~~~S~sK~~~-- 247 (397)
T PRK06939 178 IATDGVFSMDGDIAP---LPEICDLADKYDALVMVDDSHAVGFVGENG-RGTVEHFG----VMDRVDIITGTLGKALG-- 247 (397)
T ss_pred EEEecCcCCCCCcCC---HHHHHHHHHHhCCEEEEECcccccCcCCCC-CCHHHHcC----CCCCCcEEEEECHHHhC--
Confidence 676667899998655 888999999999999999999632222111 11111111 01245688999999984
Q ss_pred CceeEEEeecCHHHHHHHHHcccc----CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 046900 284 GFRVGTIYSYNDKVVTTARRMSSF----TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK 359 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 359 (442)
|+|+||++++ +.+.+.+...... ...++..+.++.+.++. +. ...+.++.++++++++.+.|++.|+++..
T Consensus 248 g~r~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~---~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 322 (397)
T PRK06939 248 GASGGYTAGR-KEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLEL---LE-ESDELRDRLWENARYFREGMTAAGFTLGP 322 (397)
T ss_pred ccCceEEEeC-HHHHHHHHHhCccccccCCCCHHHHHHHHHHHHH---Hh-cCHHHHHHHHHHHHHHHHHHHHcCCCcCC
Confidence 5699999985 5566665543221 11223334444444432 11 12466788999999999999988887766
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC--CCCCEEEEEeec-CCHHHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC--SEPGWFRVCFAN-MSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~--~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~ 436 (442)
+.++++. +.++... +..++++.|+++ ||.+.++. |+. .+.+++|++++. .+++++++++++|++++++
T Consensus 323 ~~~~~~~-~~~~~~~------~~~~~~~~L~~~-gI~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 323 GEHPIIP-VMLGDAK------LAQEFADRLLEE-GVYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred CCCCEEE-EEECCHH------HHHHHHHHHHHC-CceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 6666553 3444311 357889999888 99998644 432 224689999863 4899999999999999876
Q ss_pred H
Q 046900 437 R 437 (442)
Q Consensus 437 ~ 437 (442)
.
T Consensus 394 ~ 394 (397)
T PRK06939 394 L 394 (397)
T ss_pred h
Confidence 5
No 114
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=100.00 E-value=2.6e-30 Score=252.99 Aligned_cols=318 Identities=17% Similarity=0.240 Sum_probs=234.0
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcE
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIK 168 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~ 168 (442)
..|++..|..+|+++++++++ .+++++|+|+++++.+++.++++|||.| +++|.|..+...+.. .|++
T Consensus 47 ~~Y~~~~g~~~Leeaia~~~g----------~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~-~Ga~ 114 (431)
T cd00617 47 EAYAGSKSFYDLEDAVQDLFG----------FKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEA-NGAV 114 (431)
T ss_pred CccCCCCCHHHHHHHHHHHHC----------CCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHh-CCCE
Confidence 359999999999999999986 3579999999999999999999999987 699999999888885 9999
Q ss_pred EEEEecCCCCC------Cc--CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC-CcCCCHHHHHHHHHHHHhcCcEEEEe
Q 046900 169 IVPIHCDSSNN------FQ--ITPQALEAAYKEAESKDMRVRGVLITNPSNPL-GATIQRSVLEELLDFATRKNIHLVSD 239 (442)
Q Consensus 169 v~~v~~~~~~~------~~--~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPt-G~~~~~~~l~~l~~~~~~~~~~vi~D 239 (442)
++.++++++.+ |. +|++.|++.+++.. ..++++|++++|+||+ |.+++.+++++|.++|++||++||+|
T Consensus 115 pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~--~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~D 192 (431)
T cd00617 115 PVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVG--AENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLD 192 (431)
T ss_pred eEEEecccccccccccCCCCCcCHHHHHHHhCccc--CCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 99999976532 44 99999999997520 1247889999999998 99999999999999999999999999
Q ss_pred ccCCc--CCC-----CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce------eEEEeecCHHHHHHHHHcc-
Q 046900 240 EIYSG--SAF-----SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR------VGTIYSYNDKVVTTARRMS- 305 (442)
Q Consensus 240 e~y~~--~~~-----~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R------iG~i~~~~~~~~~~~~~~~- 305 (442)
++... ..| ++....++.++.. .+.|+||.+.++|+| .||++++++.+.+.++...
T Consensus 193 aAr~~~na~~i~~r~~g~~~~si~ei~~-----------e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~ 261 (431)
T cd00617 193 AARFAENAYFIKEREEGYRDKSIAEIAR-----------EMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVV 261 (431)
T ss_pred chhhHhhhhhhhcccccccCCCHHHHHH-----------HhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhcc
Confidence 99542 122 2333445655432 356777777777776 5799997666777666422
Q ss_pred ------ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccC-
Q 046900 306 ------SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQT- 378 (442)
Q Consensus 306 ------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~- 378 (442)
++++.+.-...+++..|..... .++ +.+.++ +++++.+.|.+.|+.+..|.||+++|++.+.......
T Consensus 262 ~~~~~~~~gG~~~r~~~A~A~gL~e~~~-~~~---l~~~~~-~r~~l~~~L~~~G~~v~~P~Ggh~v~~d~~~~~~~~~~ 336 (431)
T cd00617 262 LYEGFVTYGGMAGRDMEALAQGLREAVE-EDY---LRHRVE-QVRYLGDRLDEAGVPIVEPAGGHAVFIDAREFLPHIPQ 336 (431)
T ss_pred ccCCccccccccHHHHHHHHHHHHhccc-HHH---HHHHHH-HHHHHHHHHHHCCCCccCCCcceEEEEEhHHhcCCCCc
Confidence 1122233322333334433110 122 333333 5689999999999999999999999999886432111
Q ss_pred -hhhHHHHHHHHHHcCcEEEeC-CCCC-CC--C-------CCCEEEEEee--cCCHHHHHHHHHHHHHHHHH
Q 046900 379 -REGELALWDSMLHEVKLNISP-GSSC-HC--S-------EPGWFRVCFA--NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 379 -~~~~~~l~~~l~~~~gi~v~p-g~~f-~~--~-------~~~~iRls~~--~~~~e~i~~~l~~l~~~l~~ 436 (442)
..++.+++.+|+++.||.+.- |+.. +. . ....+||++. ..+.++++...++|..+.++
T Consensus 337 ~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 337 EQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred ccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 114789999999999999653 4421 11 1 1257999986 33889999999999888775
No 115
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.98 E-value=6.4e-30 Score=249.66 Aligned_cols=300 Identities=15% Similarity=0.221 Sum_probs=212.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS 176 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~ 176 (442)
+..+++++|+|++ .+++++++|+++++..++.+++++||.|+++.+.|......++. .|++++.+|.++
T Consensus 53 ~~~~~e~lA~~~g----------~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~-~g~~~~~~~~~~ 121 (370)
T TIGR02539 53 IHDFLEDLAEFLG----------MDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAER-AGLNVKEVPHTG 121 (370)
T ss_pred HHHHHHHHHHHhC----------CCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHH-cCCEEEEEecCC
Confidence 4677888888875 34577899999999999999999999999998886655566774 899999999876
Q ss_pred CCCCcCCHHHHHHHHHHHHhc-CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccH
Q 046900 177 SNNFQITPQALEAAYKEAESK-DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSI 255 (442)
Q Consensus 177 ~~~~~~d~~~l~~~l~~~~~~-~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~ 255 (442)
+.+|.+|+++|++.+++.... ..++++|++++|+||||...+ +++|+++|+++|+++|+||+|+.... ..+.
T Consensus 122 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~----~~~~ 194 (370)
T TIGR02539 122 HPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRM----PVSA 194 (370)
T ss_pred cccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCc----CCCH
Confidence 667889999999998753211 136789999999999999888 66778888899999999999986321 1122
Q ss_pred HHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHH----------HHHHHHHHhcCc
Q 046900 256 AEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQ----------TQYLLASMLSNK 325 (442)
Q Consensus 256 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~----------~q~~~~~~l~~~ 325 (442)
... +..++++|+||+++ +|.|+||++++ +.+.+.++....++..+.+ .+.++...+..
T Consensus 195 ~~~---------~~di~v~s~sK~~~-~~g~~G~l~~~-~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~- 262 (370)
T TIGR02539 195 KEI---------GADFIVGSGHKSMA-ASGPCGVLGMS-EEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH- 262 (370)
T ss_pred HHc---------CCCEEEeeCccccc-CCCCEEEEEEC-HHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHH-
Confidence 211 23467799999998 67789999994 5666666654443322211 33333443432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeee--cCCceEEEEEecCCccc--ccChhhHHHHHHHHHHcCcEE-EeCC
Q 046900 326 KFTENYIKTNRERLQKRYQMIIEGLRSAGIECL--KGNAGLFCWMNLSPLLE--EQTREGELALWDSMLHEVKLN-ISPG 400 (442)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~g~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~gi~-v~pg 400 (442)
..++++...+.++.. +++.+.|++.|+++. .+..+.|++++++.... ......+..+.+.|.++ ||. +++|
T Consensus 263 --~~~~l~~~~~~~~~~-~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~-GI~~ir~~ 338 (370)
T TIGR02539 263 --VVERVKRWDEEVKKT-RWFVAELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKR-GIHGIRSG 338 (370)
T ss_pred --HHHHHHHHHHHHHHH-HHHHHHHHhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhC-CCccccCC
Confidence 133444444555554 589999999998863 24456688888764210 00011234677777666 997 5542
Q ss_pred CCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 401 SSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 401 ~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
.++++|+++...+++++++++++|++++++
T Consensus 339 ------~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 339 ------QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred ------cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 246899997433899999999999998765
No 116
>PLN02822 serine palmitoyltransferase
Probab=99.98 E-value=1.2e-29 Score=254.06 Aligned_cols=356 Identities=14% Similarity=0.139 Sum_probs=246.9
Q ss_pred CCCceeeeecccc-cc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcE
Q 046900 46 NPSGVIQMGLAEN-QV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRI 123 (442)
Q Consensus 46 ~~~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i 123 (442)
+..++|||+++.. .+ .++.+.+.+.+.... .|.........|++..++.+|+++||++++ .++.|
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~----~G~g~~g~r~~yg~~~~~~~Lee~La~~~~---------~~~~i 173 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEK----YGVGSCGPRGFYGTIDVHLDCETKIAKFLG---------TPDSI 173 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHH----hCCCCcccCccccCHHHHHHHHHHHHHHhC---------CCCEE
Confidence 3467899987643 22 334444444433221 122112223357777789999999999986 35789
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc---CCc
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK---DMR 200 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~---~~~ 200 (442)
++++|.+ ++..++.+++++||.|+++..+|..+...+.. .|.+++.++.+ |.+.++..+++.... ..+
T Consensus 174 ~~s~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~l-s~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~ 244 (481)
T PLN02822 174 LYSYGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYL-SRSTIVYFKHN-------DMESLRNTLEKLTAENKRKKK 244 (481)
T ss_pred EECCHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHH-cCCeEEEECCC-------CHHHHHHHHHHHhhhhcccCC
Confidence 9998877 57888899999999999988888777777775 78899988764 456666666543321 123
Q ss_pred e-eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCccc
Q 046900 201 V-RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKD 279 (442)
Q Consensus 201 ~-~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~ 279 (442)
+ ++|++..++|+||.+.+ +++|+++|++|++++|+||+|+..+++.. ...+.+... ....+..++++||||+
T Consensus 245 ~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~-G~G~~e~~~---v~~~~~dii~~s~sKa 317 (481)
T PLN02822 245 LRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKS-GRGLSEHFG---VPIEKIDIITAAMGHA 317 (481)
T ss_pred CcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC-CCChHHHcC---CCCCCCeEEEecchhh
Confidence 4 67788888999999999 78899999999999999999997766522 112222211 0012456889999999
Q ss_pred CCCCCceeEEEeecCHHHHHHHHHcccc--CC--CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 046900 280 LGLPGFRVGTIYSYNDKVVTTARRMSSF--TL--ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-G 354 (442)
Q Consensus 280 ~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 354 (442)
+|++| ||+++ ++.+.+.++..... ++ .+++.|.++.+.++. +++ ..+.++.++++++++.+.|++. |
T Consensus 318 lg~~G---G~i~g-~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~---l~~-~~~~~~~l~~~~~~l~~~L~~~~g 389 (481)
T PLN02822 318 LATEG---GFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV---LED-NPSVLAKLKENIALLHKGLSDIPG 389 (481)
T ss_pred hhhCC---eEEEc-CHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHH---HHh-CHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99888 99998 56666666543321 22 235666776666642 222 2467788999999999999886 8
Q ss_pred CeeecCCceEEEEEecCCcccc--cChhhHHHHHHHHHHcCcEEEeCC--CCCCCC-CCCEEEEEee-cCCHHHHHHHHH
Q 046900 355 IECLKGNAGLFCWMNLSPLLEE--QTREGELALWDSMLHEVKLNISPG--SSCHCS-EPGWFRVCFA-NMSEQTLEVALK 428 (442)
Q Consensus 355 ~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~gi~v~pg--~~f~~~-~~~~iRls~~-~~~~e~i~~~l~ 428 (442)
+++..+.+++++++.+++.... .+.....+++++|++++||.+.|+ ..|... .+.++|++++ ..++++|+++++
T Consensus 390 ~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~ 469 (481)
T PLN02822 390 LSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASE 469 (481)
T ss_pred cccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHH
Confidence 8887778888999998642110 011124688999986669999976 444321 2357999876 238999999999
Q ss_pred HHHHHHHHHH
Q 046900 429 RIHNFMQKRE 438 (442)
Q Consensus 429 ~l~~~l~~~~ 438 (442)
+|++++.+..
T Consensus 470 ~l~~~~~~~~ 479 (481)
T PLN02822 470 SLKRVAASVL 479 (481)
T ss_pred HHHHHHHHHh
Confidence 9999988753
No 117
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.98 E-value=8.8e-30 Score=248.49 Aligned_cols=292 Identities=14% Similarity=0.126 Sum_probs=209.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS 176 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~ 176 (442)
..+++++++++++ .+++|++++|+.+.+ .++.+++++||.|+++.|+|+.+...++. .|++++.++.
T Consensus 63 ~~~l~~~la~~~~---------~~~~i~~~~G~~~~~-~~l~~~~~~gd~v~~~~~~~~~~~~~~~~-~g~~~~~~~~-- 129 (360)
T TIGR00858 63 HEELEEELAEWKG---------TEAALLFSSGYLANV-GVISALVGKGDLILSDALNHASLIDGCRL-SGARVRRYRH-- 129 (360)
T ss_pred HHHHHHHHHHHhC---------CCCEEEECchHHHHH-HHHHHhCCCCCEEEEEccccHHHHHHHHh-cCCceEEecC--
Confidence 4567777777764 256788888865554 56678889999999999999999988885 8999888763
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 177 SNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 177 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
+|++.+++.+++.. +.+++++++++++||||...+ +++|.++|++++++||+||+|..+.++... .+..
T Consensus 130 -----~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~ 198 (360)
T TIGR00858 130 -----NDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDG-RGTL 198 (360)
T ss_pred -----CCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCC-CchH
Confidence 57899999886521 124678888889999998877 778888899999999999999876554321 2222
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc----CCCcHHHHHHHHHHhcCchhHHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF----TLISSQTQYLLASMLSNKKFTENYI 332 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~~~~~~~~~ 332 (442)
.... ....+++++++||||.||++| ||+++ ++.+.+.+...... ...++..+.++.+.++.. . ..
T Consensus 199 ~~~~---~~~~~~~i~i~s~sK~~~~~g---G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~-~~ 267 (360)
T TIGR00858 199 EHFG---LKPEPVDIQVGTLSKALGSYG---AYVAG-SQALIDYLINRARTLIFSTALPPAVAAAALAALELI---Q-EE 267 (360)
T ss_pred HhcC---CCccCCcEEEEechhhhhccC---cEEEc-CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH---h-hC
Confidence 2211 011367899999999998766 99998 45555555432211 223444444555555421 1 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC-CCCCEE
Q 046900 333 KTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC-SEPGWF 411 (442)
Q Consensus 333 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~-~~~~~i 411 (442)
++.+++++++++++.+.|++.++++.++ +++++|+.++... ++.++++.|+++ ||.+.++..+.. .+.+++
T Consensus 268 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~l~~~-gI~v~~~~~~~~~~~~~~i 339 (360)
T TIGR00858 268 PWRREKLLALIARLRAGLEALGFTLMPS-CTPIVPVIIGDNA------SALALAEELQQQ-GIFVGAIRPPTVPAGTSRL 339 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccCCC-CCCEEEEEeCCHH------HHHHHHHHHHHC-CeeEeeeCCCCCCCCCceE
Confidence 4567899999999999999888776644 5568998876421 356888888766 999998766543 234689
Q ss_pred EEEeec-CCHHHHHHHHHHHH
Q 046900 412 RVCFAN-MSEQTLEVALKRIH 431 (442)
Q Consensus 412 Rls~~~-~~~e~i~~~l~~l~ 431 (442)
||+++. .+++++++++++|+
T Consensus 340 Ris~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 340 RLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred EEEEcCCCCHHHHHHHHHhhC
Confidence 999972 37899999998873
No 118
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.98 E-value=1.4e-29 Score=249.93 Aligned_cols=298 Identities=18% Similarity=0.148 Sum_probs=213.2
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCC
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS 177 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~ 177 (442)
.+||+++|++++ .+++++++|+++++..++.+++++||.|+++.|.|+.+...++. .+.+.+.++
T Consensus 86 ~~le~~ia~~~g----------~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~-~~~~~~~~~---- 150 (393)
T TIGR01822 86 KELEAKIAAFLG----------TEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRL-CKAKRYRYA---- 150 (393)
T ss_pred HHHHHHHHHHhC----------CCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHh-cCCceEEeC----
Confidence 788999998876 35688889999999999999999999999999999999888874 777765543
Q ss_pred CCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHH
Q 046900 178 NNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAE 257 (442)
Q Consensus 178 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~ 257 (442)
.+|++++++.+++....+.++++|++.+++||||.+.+ +++|+++|++||+++|+||+|+...++ ....+...
T Consensus 151 ---~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~-~~~~~~~~ 223 (393)
T TIGR01822 151 ---NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLG-PTGRGSHE 223 (393)
T ss_pred ---CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcC-CCCCchHH
Confidence 26899999999864333336778888889999999987 788889999999999999999643332 22222222
Q ss_pred HHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc-cc-C--CCcHHHHHHHHHHhcCchhHHHHHH
Q 046900 258 ILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS-SF-T--LISSQTQYLLASMLSNKKFTENYIK 333 (442)
Q Consensus 258 ~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~-~~-~--~~s~~~q~~~~~~l~~~~~~~~~~~ 333 (442)
...- ..+..++++|+||.+ +|+|+||+++ ++.+.+.++... .+ + ..++..+.++.+.++ .. +..+
T Consensus 224 ~~~~----~~~~di~~~s~sK~l--~g~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~---~~-~~~~ 292 (393)
T TIGR01822 224 LCGV----MGRVDIITGTLGKAL--GGASGGFTTA-RKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLE---ML-EASN 292 (393)
T ss_pred hcCC----CCCCeEEEEEChHHh--hCCCcEEEEe-CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHH---HH-hcCH
Confidence 2110 124568899999987 4789999998 466666665432 22 1 223333344444443 21 1245
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC--CCCCEE
Q 046900 334 TNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC--SEPGWF 411 (442)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~--~~~~~i 411 (442)
+.+++++++++++.+.|++.|+++.++.++ ++.+.++... .+.+++..|+++ ||.+. +..|.. .+...+
T Consensus 293 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~i~~~~~~------~~~~l~~~L~~~-gI~v~-~~~~~~~~~~~~~i 363 (393)
T TIGR01822 293 ELRDRLWANTRYFRERMEAAGFDIKPADHP-IIPVMLYDAV------LAQRFARRLLEE-GIYVT-GFFYPVVPKGQARI 363 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-EEEEEeCCHH------HHHHHHHHHHHC-CeeEe-eeCCCCCCCCCceE
Confidence 677889999999999998888877655555 4444544321 357888888877 99998 555532 123469
Q ss_pred EEEeec-CCHHHHHHHHHHHHHHHHHH
Q 046900 412 RVCFAN-MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 412 Rls~~~-~~~e~i~~~l~~l~~~l~~~ 437 (442)
|++++. .+++++++++++|+++.++.
T Consensus 364 Ris~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 364 RVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 988862 27999999999999987654
No 119
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=3.9e-29 Score=246.14 Aligned_cols=343 Identities=14% Similarity=0.124 Sum_probs=238.8
Q ss_pred CCCceeeeeccc-ccc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcE
Q 046900 46 NPSGVIQMGLAE-NQV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRI 123 (442)
Q Consensus 46 ~~~~~i~l~~~~-n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i 123 (442)
...++|||+.+. ..+ +.+.+.+.+.+..... + .....|....|..++++++++++.+..+ .++.|
T Consensus 31 ~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~----~----~~~~~~~~~~g~~~l~~~l~~~l~~~~g-----~~~~i 97 (385)
T TIGR01825 31 NGKEVINLSSNNYLGFADHPRLKEAAAQAIQQY----G----VGAGAVRTIAGTLRLHEELEEKLAKFKK-----TEAAL 97 (385)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHc----C----CCCCccCcccCCcHHHHHHHHHHHHHhC-----CCcEE
Confidence 346789999875 234 3455544444332110 0 1124576778999999999999998765 24578
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
++++| ++++..++.+++++||.|+++.|+|+.+...+.. .|+++..++ .+|++++++.+++.. ..++++
T Consensus 98 ~~~sG-~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~-~g~~~~~~~-------~~d~~~l~~~l~~~~--~~~~~~ 166 (385)
T TIGR01825 98 VFQSG-FNTNQGVLSALLRKGDIVLSDELNHASIIDGLRL-TKATKKIYK-------HADMDDLDRVLRENP--SYGKKL 166 (385)
T ss_pred EECcH-HHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHh-cCCceEEeC-------CCCHHHHHHHHHhhc--cCCCeE
Confidence 88888 4566678888899999999999999998877774 788876654 278889998887532 135778
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
+++++++||||.+.+ +++|.++|++||+++|+||+|+.+.++.........+.- ..+.+++++||||.+|++
T Consensus 167 v~~~~v~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~ 238 (385)
T TIGR01825 167 IVTDGVFSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGL-----EDKVDIQVGTLSKAIGVV 238 (385)
T ss_pred EEEecCCcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCC-----CcCCcEEEEeccHHhhcC
Confidence 887788999999988 678889999999999999999876654221111111111 136789999999999866
Q ss_pred CceeEEEeecCHHHHHHHHHccc-c--C-CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 046900 284 GFRVGTIYSYNDKVVTTARRMSS-F--T-LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK 359 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~~-~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 359 (442)
| ||+++ ++.+.+.+..... + . ..+++.+.++.+.++.. .+. .+..+++.++++++.+.|++.|+++..
T Consensus 239 g---G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~ 310 (385)
T TIGR01825 239 G---GYAAG-HKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDEL---QRS-PELMERLWDNTRFFKAGLGKLGYDTGG 310 (385)
T ss_pred C---CEEec-CHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHH---hcC-HHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 6 99988 5556666554322 2 2 23456666666666432 111 234566778899999999988988877
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC--CCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC--SEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~--~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
+.++ ++++.++.. .+..++++.|+++ ||.+. +..|+. .+..++|++++ ..+++++++++++|++++++
T Consensus 311 ~~~~-~~~~~~~~~------~~~~~~~~~L~~~-gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 311 SETP-ITPVVIGDE------KAAQEFSRRLFDE-GIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred CCCC-EEEEEECCH------HHHHHHHHHHHHC-CcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 7766 444444321 1356788999888 99985 444542 23468999875 34899999999999999865
Q ss_pred H
Q 046900 437 R 437 (442)
Q Consensus 437 ~ 437 (442)
+
T Consensus 382 ~ 382 (385)
T TIGR01825 382 L 382 (385)
T ss_pred h
Confidence 3
No 120
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=6.5e-29 Score=249.17 Aligned_cols=312 Identities=17% Similarity=0.166 Sum_probs=219.7
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCc
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGI 167 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~ 167 (442)
...|+...++.+|++++|+|++ .++.|++++|. .++..++.+++++||.|++++|+|+.+...++. .|+
T Consensus 139 r~~~g~~~~~~ele~~lA~~~g---------~~~ai~~~~G~-~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~-~Ga 207 (489)
T PLN02483 139 RVDGGTTKLHRELEELVARFVG---------KPAAIVFGMGY-ATNSTIIPALIGKGGLIISDSLNHNSIVNGARG-SGA 207 (489)
T ss_pred ccccCCcHHHHHHHHHHHHHhC---------CCcEEEECCHH-HHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHH-cCC
Confidence 3457777889999999999987 25677777764 445577788999999999999999999999885 999
Q ss_pred EEEEEecCCCCCCcCCHHHHHHHHHHHHhcC-Cc-----eeEEEEeCC-CCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 168 KIVPIHCDSSNNFQITPQALEAAYKEAESKD-MR-----VRGVLITNP-SNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 168 ~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~-~~-----~~~v~l~~P-~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
+++.++.+ |++++++.+++....+ ++ .++++++++ .|++|.+.+ +++|+++|++|++++|+||
T Consensus 208 ~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDE 277 (489)
T PLN02483 208 TIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDE 277 (489)
T ss_pred eEEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEEC
Confidence 99999853 5677777776432110 12 256677766 599999987 8888899999999999999
Q ss_pred cCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc---cC-CCc-HHHH
Q 046900 241 IYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS---FT-LIS-SQTQ 315 (442)
Q Consensus 241 ~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~---~~-~~s-~~~q 315 (442)
+|+...++ .......++.. .+..+.+|+++||||+||++| ||+++ ++.+.+.++.... +. .++ +..|
T Consensus 278 a~s~g~~G-~~G~g~~~~~~---v~~~~~dI~~~SfSKs~g~~G---G~i~~-~~~li~~l~~~~~~~~~~~~~~p~~~~ 349 (489)
T PLN02483 278 AHSIGAVG-KTGRGVCELLG---VDPADVDIMMGTFTKSFGSCG---GYIAG-SKELIQYLKRTCPAHLYATSMSPPAVQ 349 (489)
T ss_pred cCccCccC-CCCCchHHhcC---CCcccCcEEEEecchhcccCc---eEEEc-CHHHHHHHHHhCccccccCCcCHHHHH
Confidence 99854332 21112222211 011356789999999999877 99998 5667777665422 21 223 3344
Q ss_pred HHHHHHhc---CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHc
Q 046900 316 YLLASMLS---NKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHE 392 (442)
Q Consensus 316 ~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 392 (442)
.+ .+.++ ..+. .++..+.++.++++++++.+.|++.|+.+..+.++..+|+.+.... ...++++.|+++
T Consensus 350 ~~-~aaL~~l~~~~g-~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~sp~~~l~l~~~~------~~~~~~~~Ll~~ 421 (489)
T PLN02483 350 QV-ISAIKVILGEDG-TNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPA------KIPAFSRECLKQ 421 (489)
T ss_pred HH-HHHHHHHHhCcc-ccchHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCEEEEEECCHH------HHHHHHHHHHHC
Confidence 33 33332 1110 1223455778999999999999999988776666667776654321 255788888887
Q ss_pred CcEEEeCCCCCCC--CCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHHH
Q 046900 393 VKLNISPGSSCHC--SEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 393 ~gi~v~pg~~f~~--~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~~ 438 (442)
||.+.| ..|.. ...+++|++++. .++|++++++++|.++++...
T Consensus 422 -GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 422 -NVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred -CcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 999997 55532 234689999973 489999999999999987653
No 121
>PLN02721 threonine aldolase
Probab=99.97 E-value=8.4e-29 Score=240.99 Aligned_cols=334 Identities=15% Similarity=0.189 Sum_probs=220.7
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
+.+++|+.++++.|.+.+.+.+...... .....|++ ...+||+++|++++. +.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~----------~~~~~~~~--~~~~l~~~la~~~~~----------~~~~~~~ 62 (353)
T PLN02721 5 SRVVDLRSDTVTKPTDAMRAAMANAEVD----------DDVLGYDP--TALRLEEEMAKIFGK----------EAALFVP 62 (353)
T ss_pred hhhhhhhcccccCCCHHHHHHHHhccCC----------CcccCCCH--HHHHHHHHHHHHhCC----------ceeEEec
Confidence 3568999999888877777776653110 01223332 368999999999862 2345555
Q ss_pred ChHHHHHHHHHhhcC-CCCeEEEcCCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC-Ccee
Q 046900 128 GATAANELLTFILAD-PGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD-MRVR 202 (442)
Q Consensus 128 G~~~ai~~~~~~l~~-~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~ 202 (442)
++++++..++.+++. +||.|++++|+|..... .+. ..|++++.+|.++ .+.+|++.+++.+++....+ ++++
T Consensus 63 ~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~ 139 (353)
T PLN02721 63 SGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENGGIST-LGGVHPRTVKNNE--DGTMDLDAIEAAIRPKGDDHFPTTR 139 (353)
T ss_pred CccHHHHHHHHHHccCCCCeEEEcCccceehhcccchhh-hcCceeEecCCCc--CCCcCHHHHHHHHHhccCCCCCcce
Confidence 556666677777777 99999999999864443 345 4899999998764 45689999999997421111 3788
Q ss_pred EEEEeCC-CCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 203 GVLITNP-SNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 203 ~v~l~~P-~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
+++++++ +||||.+++.+++++|+++|+++|+++|+||+|...... ....+...+... .+ .++.|+||.++
T Consensus 140 ~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~-~~~~~~~~~~~~-----~d--~~~~s~sK~l~ 211 (353)
T PLN02721 140 LICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASV-ALGVPVHRLVKA-----AD--SVSVCLSKGLG 211 (353)
T ss_pred EEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchh-hhCCCHHHHhhh-----CC--EEEEecccccC
Confidence 9999875 789999999999999999999999999999998632110 001122223221 23 33457999986
Q ss_pred CCCceeEE-EeecCHHHHHHHHHccccC--CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 046900 282 LPGFRVGT-IYSYNDKVVTTARRMSSFT--LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIEC 357 (442)
Q Consensus 282 ~~G~RiG~-i~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 357 (442)
. ++|| +++ ++.+.+.+....... ..+...+.++..+.. ++++.+..+ +..++++++.+.|++. ++.+
T Consensus 212 ~---~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~-~~~~~~~~l~~~L~~~~~~~~ 282 (353)
T PLN02721 212 A---PVGSVIVG-SKSFIRKAKRLRKTLGGGMRQVGVLAAAALVA----LQENVPKLE-DDHKKAKLLAEGLNQIKGLRV 282 (353)
T ss_pred C---ceeeEEec-CHHHHHhHHHHHHhcCCCeehhHHHHHHHHHH----HHHHHHHHH-HHHHHHHHHHHHHHhCCCcEE
Confidence 3 3576 455 566665554433321 222222222222221 123333333 3356678999999887 6754
Q ss_pred --ecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 358 --LKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 358 --~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
..+.+ .++|++++.... .+..++++.|.++ ||.+.|+. .+++|++++ ..+++++++++++|++++
T Consensus 283 ~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~L~~~-gi~v~~~~------~~~lR~~~~~~~~~~~i~~~~~~l~~~~ 350 (353)
T PLN02721 283 NVAAVET-NIVYFDITDGSR----ITAEKLCKSLEEH-GVLLMPGN------SSRIRVVTHHQISDSDVQYTLSCFQQAA 350 (353)
T ss_pred ecCCccc-eEEEEEccCCcc----ccHHHHHHHHHhC-CcEEecCC------CceEEEEecCcCCHHHHHHHHHHHHHHh
Confidence 34444 479999875210 0356788888755 99999973 458999997 448999999999999876
Q ss_pred H
Q 046900 435 Q 435 (442)
Q Consensus 435 ~ 435 (442)
.
T Consensus 351 ~ 351 (353)
T PLN02721 351 L 351 (353)
T ss_pred h
Confidence 5
No 122
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=4.4e-29 Score=246.91 Aligned_cols=295 Identities=15% Similarity=0.206 Sum_probs=213.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCcc-CCCcEEEecChHHHHHHHHHhh----cCCCCeEEEcCCCCcC----hHHhHhhhcCc
Q 046900 97 LKSFRQAMASFMEQIRGGRAKF-DLNRIVVTAGATAANELLTFIL----ADPGDALLVPTPYYPG----FDRDLRWRTGI 167 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~-~~~~i~~t~G~~~ai~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~~G~ 167 (442)
+.++|+++|++++ + ++++|++|+|+++++.+++.++ +++||+|++++|.|+. +...++ ..|+
T Consensus 65 ~~~~r~~la~~~g--------~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~-~~g~ 135 (401)
T PRK10874 65 YEAAREQVAQLLN--------APDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQ-QTGA 135 (401)
T ss_pred HHHHHHHHHHHcC--------CCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHH-HhCC
Confidence 5688888888875 4 6889999999999999999988 4789999999999875 344455 4899
Q ss_pred EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCC
Q 046900 168 KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAF 247 (442)
Q Consensus 168 ~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~ 247 (442)
+++.++.+. ++.+|++++++.+++ +++++++++|+||||.+++ +++|+++|+++|+++|+|++|+...+
T Consensus 136 ~v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~ 204 (401)
T PRK10874 136 KVVKLPLGA--DRLPDVDLLPELITP------RTRILALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF 204 (401)
T ss_pred EEEEEecCC--CCcCCHHHHHHhcCc------CcEEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc
Confidence 999999864 457899999999865 7899999999999999998 67888888999999999999974222
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc---------------------c
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS---------------------S 306 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~---------------------~ 306 (442)
..++..+ +..+++.|++|.+|.+| +||++++ +.+.+.+.... .
T Consensus 205 ----~~~~~~~---------~~d~~~~s~~K~~gp~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (401)
T PRK10874 205 ----PADVQAL---------DIDFYAFSGHKLYGPTG--IGVLYGK-SELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWR 268 (401)
T ss_pred ----cCCchhc---------CCCEEEEecccccCCCc--cEEEEEc-hHHHhcCCCeecCCcceEeeccCccCCCCChhh
Confidence 1222222 23467899999998777 5999984 44444332111 0
Q ss_pred --cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCCcccccChhhHH
Q 046900 307 --FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSPLLEEQTREGEL 383 (442)
Q Consensus 307 --~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 383 (442)
.++.+.+.+.++.+.++... +......+++.++.++++.+.|+++ |++...+..+.++++.++.. +..
T Consensus 269 ~e~Gt~~~~~~~al~~al~~l~--~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~-------~~~ 339 (401)
T PRK10874 269 FEAGTPNVAGVIGLSAALEWLA--DIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGV-------HHS 339 (401)
T ss_pred ccCCCcCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCc-------CHH
Confidence 12233345555555543111 1113345677777888999999886 88777655555666676542 245
Q ss_pred HHHHHHHHcCcEEEeCCCCCCC------CCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHH
Q 046900 384 ALWDSMLHEVKLNISPGSSCHC------SEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 384 ~l~~~l~~~~gi~v~pg~~f~~------~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~ 437 (442)
++.+.|.+ +||.+++|..|.. ...+++|+|+.. .++++++++++.|+++++.+
T Consensus 340 ~~~~~L~~-~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 340 DLVTLLAE-YGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred HHHHHHHH-CCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 67777655 5999999986642 124789999982 27999999999999987754
No 123
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=1.2e-28 Score=243.64 Aligned_cols=296 Identities=17% Similarity=0.184 Sum_probs=211.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCcc-CCCcEEEecChHHHHHHHHHhh----cCCCCeEEEcCCCCcC----hHHhHhhhcC
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKF-DLNRIVVTAGATAANELLTFIL----ADPGDALLVPTPYYPG----FDRDLRWRTG 166 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~-~~~~i~~t~G~~~ai~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~~G 166 (442)
.+.++|+++|++++ + ++++|++|+|+++++.+++.++ +++||+|++++|.|+. +...++ ..|
T Consensus 61 ~~~~~r~~la~~~g--------~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~-~~g 131 (398)
T TIGR03392 61 RYELARQQVARFLN--------APDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQ-QTG 131 (398)
T ss_pred HHHHHHHHHHHHhC--------CCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHH-HcC
Confidence 35678889998876 4 4789999999999999999887 4789999999999876 334456 489
Q ss_pred cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 167 ~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
++++.+|++. ++.+|++.+++.+.+ +++++++++|+||||.+++ +++|+++|+++|+++|+|++|+...
T Consensus 132 ~~v~~v~~~~--~~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~ 200 (398)
T TIGR03392 132 AKVVKLPIGA--DLLPDIRQLPELLTP------RTRILALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVH 200 (398)
T ss_pred cEEEEEecCC--CCCcCHHHHHHHhcc------CceEEEEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCC
Confidence 9999999875 356899999998865 7899999999999999998 6778888999999999999997432
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc---------------------
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS--------------------- 305 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--------------------- 305 (442)
+ ...+... +..+++.|++|.+|.+| +||++++ +.+.+.+....
T Consensus 201 ~----~~~~~~~---------~~d~~~~s~~K~~gp~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (398)
T TIGR03392 201 G----PPDVQAL---------DIDFYAFSGHKLYGPTG--IGVLYGK-TELLEAMPPWQGGGKMLSHVSFDGFIPQAVPH 264 (398)
T ss_pred C----CCChhhc---------CCCEEEEecccccCCCc--eEEEEEc-HHHHhhCCCeecCCceEeeccccccccCCChh
Confidence 2 1222222 22367788899988666 8999985 44444332110
Q ss_pred c--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCCcccccChhhH
Q 046900 306 S--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSPLLEEQTREGE 382 (442)
Q Consensus 306 ~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 382 (442)
. .++.+.+...++.+.++-.. +....+.+++.++.++++.+.|.++ |+++..+..+.++++.++.. +.
T Consensus 265 ~~e~GT~~~~~~~a~~~al~~l~--~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~-------~~ 335 (398)
T TIGR03392 265 RFEAGTPNIAGVIGLSAALEWLT--DIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGV-------HH 335 (398)
T ss_pred hccCCCCCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCc-------CH
Confidence 0 01223333333333333110 1113455667777788888888876 77776544555676666542 24
Q ss_pred HHHHHHHHHcCcEEEeCCCCCCC------CCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHH
Q 046900 383 LALWDSMLHEVKLNISPGSSCHC------SEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 383 ~~l~~~l~~~~gi~v~pg~~f~~------~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~ 437 (442)
.++.+.|.+ +||.+++|..+.. ..++++|+|+.. -++++++++++.|+++++++
T Consensus 336 ~~l~~~L~~-~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 336 SDLAALLAE-SGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHh-CCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 567777755 4999999986531 124789999962 28999999999999988764
No 124
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.97 E-value=1.8e-28 Score=241.51 Aligned_cols=341 Identities=16% Similarity=0.157 Sum_probs=223.7
Q ss_pred CCCceeeeeccccc-c-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcE
Q 046900 46 NPSGVIQMGLAENQ-V-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRI 123 (442)
Q Consensus 46 ~~~~~i~l~~~~n~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i 123 (442)
....+|||+.+++. + +++.+.+.+.+..... + .....|....|..++++.+++.+.+.++ .++.|
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~----~----~~~~~~~~~~g~~~~~~~l~~~la~~~~-----~~~~i 103 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRY----G----AGSGGSRLVTGNSPAHEALEEELAEWFG-----AERAL 103 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhc----C----CCCCCcCcccCCcHHHHHHHHHHHHHhC-----CCcEE
Confidence 45788999988652 2 3354555444332110 0 0011222233444455555555554433 24445
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
+++ ++++++..++..++++||.|+++.|+|+.+...+.. .|++++.++. .|++.+++.+++. ..++.+
T Consensus 104 ~~~-~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~-~g~~~~~~~~-------~d~~~l~~~i~~~---~~~~~l 171 (385)
T PRK05958 104 LFS-SGYAANLAVLTALAGKGDLIVSDKLNHASLIDGARL-SRARVRRYPH-------NDVDALEALLAKW---RAGRAL 171 (385)
T ss_pred EEC-cHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHh-cCCceEEeCC-------CCHHHHHHHHHhc---cCCCeE
Confidence 555 455666667788899999999999999999888885 8999888864 3788999988642 113445
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
+++.+++||||...+ +++|+++|++||+++|+||+|+.+.++.... ....... ....+++++++|+||.+|.+
T Consensus 172 vi~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~-~~~~~~~---~~~~~~~i~~~s~sK~~~~~ 244 (385)
T PRK05958 172 IVTESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGR-GLAAEAG---LAGEPDVILVGTLGKALGSS 244 (385)
T ss_pred EEEEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCC-chHHhhC---CCCCCceEEEEechhhcccC
Confidence 555567899998877 7888899999999999999998655532111 1111100 01236789999999999876
Q ss_pred CceeEEEeecCHHHHHHHHHcc-cc---CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 046900 284 GFRVGTIYSYNDKVVTTARRMS-SF---TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK 359 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 359 (442)
| ||+++ ++.+.+.+.... .+ ...++..+.++.+.++... .. ...++.+.++++++.+.|++.|+++.+
T Consensus 245 G---g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~---~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~ 316 (385)
T PRK05958 245 G---AAVLG-SETLIDYLINRARPFIFTTALPPAQAAAARAALRILR---RE-PERRERLAALIARLRAGLRALGFQLMD 316 (385)
T ss_pred C---cEEEc-CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh---cC-HHHHHHHHHHHHHHHHHHHHcCCCcCC
Confidence 7 99988 455665544322 21 2234444444545554221 11 356778889999999999988888776
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC-CCCCEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC-SEPGWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~-~~~~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
+.++ ++|+.++.. .++.++++.|.++ ||.+.++..+.. .+.+++||+++ ..+++++++++++|++++
T Consensus 317 ~~~~-~~~~~~~~~------~~~~~~~~~l~~~-gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 317 SQSA-IQPLIVGDN------ERALALAAALQEQ-GFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred CCCC-EEEEEeCCH------HHHHHHHHHHHHC-CceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 6665 677877642 1366888888776 999998654432 23468999997 338999999999998753
No 125
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=1.9e-28 Score=242.60 Aligned_cols=346 Identities=15% Similarity=0.134 Sum_probs=230.7
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecC
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAG 128 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G 128 (442)
..|+|..++|.+++. +.+.+...... . .+... .....|....+...+++.+++++.+.+| ++..+|++++
T Consensus 20 ~~~~~~~~~~~~~~~-v~~a~~~~~~~-~--~~~g~-~~~~~~~~~~~~~~l~~~~~~~~~~~~g----~~~~~v~~~s- 89 (402)
T cd00378 20 ETLELIASENFTSPA-VMEAMGSDLTN-K--YAEGY-PGKRYYGGCEYVDEIEDLAIERAKKLFG----AEYANVQPHS- 89 (402)
T ss_pred hCeeeeccCCcCCHH-HHHHhcccccc-c--ccCCC-CCCcccCCchHHHHHHHHHHHHHHHHhC----CCceeeecCC-
Confidence 347888888877544 44444432210 0 11000 1123466666778888888888877766 3455666665
Q ss_pred hHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh-----HhhhcCcEEEEEecCCC-CCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 129 ATAANELLTFILADPGDALLVPTPYYPGFDRD-----LRWRTGIKIVPIHCDSS-NNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 129 ~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~~G~~v~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
+++++..++.+++++||+|++++|+|+.+... +. ..|.++..++++.+ +++.+|++.+++.+.+ .+++
T Consensus 90 gt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~-----~~~~ 163 (402)
T cd00378 90 GSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVS-ASGKLFESVPYGVDPETGLIDYDALEKMALE-----FKPK 163 (402)
T ss_pred cHHHHHHHHHHhcCCCCEEEEecCccCcccccccccccc-ccceeEEEecCCcCcccCCcCHHHHHHHHHh-----CCCC
Confidence 57999999999999999999999999876443 45 37887777776544 2578999999999864 2678
Q ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccC-CcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 203 GVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY-SGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 203 ~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y-~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
++++++|+||+ ..+ +++|+++|+++|++||+|++| .++.+.+....++. . .+ ++++|+||++
T Consensus 164 ~v~~~~~~~~~--~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~----~-----~d--v~~~s~sK~l- 226 (402)
T cd00378 164 LIVAGASAYPR--PID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP----G-----AD--VVTTTTHKTL- 226 (402)
T ss_pred EEEecCcccCC--CcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc----C-----Cc--EEEeccccCC-
Confidence 88988998875 333 888999999999999999996 44444332111111 1 12 5789999977
Q ss_pred CCCceeEEEeecCHHHHHHHHHccccC--CCcH-HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 046900 282 LPGFRVGTIYSYNDKVVTTARRMSSFT--LISS-QTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECL 358 (442)
Q Consensus 282 ~~G~RiG~i~~~~~~~~~~~~~~~~~~--~~s~-~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 358 (442)
+|+|.||++++++.+.+.+.+....+ ..+. ..+.++...+.. ....+..+.+++++++++++.+.|.+.|+.+.
T Consensus 227 -~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 303 (402)
T cd00378 227 -RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKE--ALEPEFKAYAKQVVENAKALAEALKERGFKVV 303 (402)
T ss_pred -CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEe
Confidence 78999999997646666665433322 1222 222222222221 11224556778899999999999998898876
Q ss_pred -cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCC----CCCCCEEEEEeec-----CCHHHHHHHHH
Q 046900 359 -KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCH----CSEPGWFRVCFAN-----MSEQTLEVALK 428 (442)
Q Consensus 359 -~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~----~~~~~~iRls~~~-----~~~e~i~~~l~ 428 (442)
.+.+++++|++++.... +...+.+. ++++||.+.++.... ...+.++|+++.. +++++++++++
T Consensus 304 ~~~~~~~~v~v~~~~~~~-----~~~~~~~~-l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~ 377 (402)
T cd00378 304 SGGTDNHLVLVDLRPKGI-----TGKAAEDA-LEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIAD 377 (402)
T ss_pred ecCCCCeEEEEeCCccCC-----CHHHHHHH-HHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHH
Confidence 46788999999974211 13344444 466699998633211 1134679999854 35899999999
Q ss_pred HHHHHHHH
Q 046900 429 RIHNFMQK 436 (442)
Q Consensus 429 ~l~~~l~~ 436 (442)
.|++++.+
T Consensus 378 ~l~~~~~~ 385 (402)
T cd00378 378 FIARALKD 385 (402)
T ss_pred HHHHHHhc
Confidence 99997764
No 126
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.97 E-value=2.8e-28 Score=224.04 Aligned_cols=322 Identities=16% Similarity=0.236 Sum_probs=215.0
Q ss_pred ccccc-CCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHH--HHHhh----cC--------CCCeEEEcC
Q 046900 87 ENALF-QDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANEL--LTFIL----AD--------PGDALLVPT 151 (442)
Q Consensus 87 ~~~~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~--~~~~l----~~--------~gd~Vl~~~ 151 (442)
+..+| +...|++++|+-+|+.++ +++++|++..+++-.+.. +..++ .. +.-+.|+|.
T Consensus 60 D~RNY~G~l~Gipe~r~l~a~llg--------v~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPv 131 (425)
T PF12897_consen 60 DCRNYPGGLDGIPEARELFAELLG--------VPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPV 131 (425)
T ss_dssp BTTSS-S-SS--HHHHHHHHHHHT--------S-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEE
T ss_pred cccCCCCccCChHHHHHHHHHHhC--------CCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecC
Confidence 45679 888999999999999987 789999888776544332 22222 11 123789999
Q ss_pred CCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCC--CCCCCcCCCHHHHHHHHHH-
Q 046900 152 PYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNP--SNPLGATIQRSVLEELLDF- 228 (442)
Q Consensus 152 p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P--~NPtG~~~~~~~l~~l~~~- 228 (442)
|+|.-+...++. .|++.++||++++| +|+|.+++.+.+ ++.+|.++.+ | +||||.+||.+..++++.+
T Consensus 132 PGYDRHFai~E~-~Giemi~VpM~~dG---PDmD~Ve~LV~~----D~svKGiWcV-P~ySNPtG~tySde~vrrlA~m~ 202 (425)
T PF12897_consen 132 PGYDRHFAITEH-FGIEMIPVPMTEDG---PDMDMVEELVAE----DPSVKGIWCV-PKYSNPTGITYSDEVVRRLAAMK 202 (425)
T ss_dssp S--HHHHHHHHH-CT-EEEEEEEETTE---E-HHHHHHHTHT----STTEEEEEE--SSS-TTT-----HHHHHHHHHS-
T ss_pred CCchHHHHHHHh-hCcEEEecCCCCCC---CCHHHHHHHHhc----CCccceEEeC-CCccCCCCccCCHHHHHHHhcCC
Confidence 999999999985 99999999999876 899999998864 4578876544 5 7999999999999999987
Q ss_pred HHhcCcEEEEeccCCcCCCC-CCC---cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc
Q 046900 229 ATRKNIHLVSDEIYSGSAFS-SSE---FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM 304 (442)
Q Consensus 229 ~~~~~~~vi~De~y~~~~~~-~~~---~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~ 304 (442)
+...++.|+-|++|.--.+. ..+ +..+...+.+. .++++++.+.|+||.. +||-+++++.++.+.+....+.+
T Consensus 203 ~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~A--Gnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~~~~~ 279 (425)
T PF12897_consen 203 TAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKA--GNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWIKKHL 279 (425)
T ss_dssp -SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHT--T-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHHHHHH
T ss_pred cCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHc--CCCCeEEEEecccccc-cCCcceeeeecCHHHHHHHHHHh
Confidence 34579999999999865552 211 23566666553 4679999999999987 69999999999655555444433
Q ss_pred ccc-CCCcHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHHHHHHHhC-C-----CeeecCCceEEEEEecCCcccc
Q 046900 305 SSF-TLISSQTQYLLASMLSNKK-FTENYIKTNRERLQKRYQMIIEGLRSA-G-----IECLKGNAGLFCWMNLSPLLEE 376 (442)
Q Consensus 305 ~~~-~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g-----~~~~~~~~g~~~~~~~~~~~~~ 376 (442)
... .+..-+.|..-..++.+.+ -+.+|+++.++.++-+.+.+.+.|++. | .+|..|.||||+++++.+.
T Consensus 280 ~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G--- 356 (425)
T PF12897_consen 280 SVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG--- 356 (425)
T ss_dssp HHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT---
T ss_pred cCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC---
Confidence 222 3456799999999999976 678999999999999999888888653 3 4788999999999998874
Q ss_pred cChhhHHHHHHHHHHcCcEEEeC-CCCCCCC---CCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 377 QTREGELALWDSMLHEVKLNISP-GSSCHCS---EPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 377 ~~~~~~~~l~~~l~~~~gi~v~p-g~~f~~~---~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
.+..+.+. .++.||.+.| |..|... .+..|||+.+.++.++++.+++.+.-+++-
T Consensus 357 ----~AkrvV~l-akeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 357 ----TAKRVVEL-AKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVKL 415 (425)
T ss_dssp -----HHHHHHH-HHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHHH
T ss_pred ----hHHHHHHH-HHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 24555544 4666999998 7777542 246899999987899999999999877654
No 127
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.97 E-value=2.3e-28 Score=236.44 Aligned_cols=300 Identities=16% Similarity=0.136 Sum_probs=207.6
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcC
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTG 166 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G 166 (442)
.|.+.....++++.++++++ ++++++++|+++++..++.+++++||.|+++.|+|..+.. .+.. .|
T Consensus 27 ~~~~~~~~~~l~~~~a~~~g----------~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~~~~~~-~g 95 (338)
T cd06502 27 VYGEDPTTAKLEARAAELFG----------KEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAGAPEFL-SG 95 (338)
T ss_pred ccCCCHHHHHHHHHHHHHhC----------CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCCcHHHH-cC
Confidence 45445566788888877763 4567788888899999999999999999999999876442 2343 79
Q ss_pred cEEEEEecCCCCCCcCCHHHHHHHHHHHHhc-CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESK-DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 167 ~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~-~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
++++.++.+. +.+|++.+++++++..+. ..++++|++++|+|| |.+++.+++++|+++|+++|+++|+||+|..+
T Consensus 96 ~~~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~ 171 (338)
T cd06502 96 VKLLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLAN 171 (338)
T ss_pred ceEEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHH
Confidence 9999998743 568999999998642110 136789999999998 66779999999999999999999999998643
Q ss_pred CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc----cCCCcHHHHHHHHHH
Q 046900 246 AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS----FTLISSQTQYLLASM 321 (442)
Q Consensus 246 ~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~----~~~~s~~~q~~~~~~ 321 (442)
...... .++..+... .. +++.|+||.||++| |+++..++.+.+.++.... .+..+++.+.++...
T Consensus 172 ~~~~~~-~~~~~~~~~------~d-~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 240 (338)
T cd06502 172 AAAALG-VALKTYKSG------VD-SVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAA 240 (338)
T ss_pred HHHhcC-CCHHHHHhc------CC-EEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHH
Confidence 211111 133333221 22 45789999999887 5544335666666654332 223456777777777
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHH--HcCcEEEeC
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSML--HEVKLNISP 399 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~--~~~gi~v~p 399 (442)
|+...+ .+..+++.++++++.+.|++.|+.+.++.++ ++.+.++.... ....+.+.+. .+.|+.+.+
T Consensus 241 L~~~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~v~~~~~~~-----~~~~l~~~l~~~~~~gi~~~~ 309 (338)
T cd06502 241 LENDLW-----LRRLRHDHEMARRLAEALEELGGLESEVQTN-IVLLDPVEANA-----VFVELSKEAIERRGEGVLFYA 309 (338)
T ss_pred hcCchH-----HHHHHHHHHHHHHHHHHHHhcCCCcccccCC-eEEEecCCccH-----HHHHHHHHHHHhhhCCEEEEe
Confidence 776443 2344566677889999999888776666766 55556543110 1223333333 134999877
Q ss_pred CCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHH
Q 046900 400 GSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHN 432 (442)
Q Consensus 400 g~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~ 432 (442)
.. .+++|+++.. .++++++++++++++
T Consensus 310 ~~------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 310 WG------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred cC------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 42 2689999972 278999999998864
No 128
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=1.5e-28 Score=242.79 Aligned_cols=339 Identities=15% Similarity=0.158 Sum_probs=224.9
Q ss_pred CCCCCceeeeeccc--ccccH--HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLAE--NQVSF--DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~~--n~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+|||..+. +.+++ +.+.+.+.+...... .....| ..++++++++++.+..+
T Consensus 35 d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~--------~~~~~~-----~~~~~~~la~~l~~~~~------ 95 (396)
T PRK02627 35 DDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLI--------HTSNLY-----YIEPQEELAEKLVELSG------ 95 (396)
T ss_pred eCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcc--------cccccc-----CCHHHHHHHHHHHhhcC------
Confidence 44566789987653 34433 555555554432110 001122 36888889998887533
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCC-------CeEEEcCCCCcChHHhHhhhcCcEEEE---EecCCCCCC----cCCHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPG-------DALLVPTPYYPGFDRDLRWRTGIKIVP---IHCDSSNNF----QITPQ 185 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~g-------d~Vl~~~p~y~~~~~~~~~~~G~~v~~---v~~~~~~~~----~~d~~ 185 (442)
.+++++|+|+++++.++++++...+ +.|++..++|.++........+..... .++. .++ ..|++
T Consensus 96 ~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~ 173 (396)
T PRK02627 96 MDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIE 173 (396)
T ss_pred CCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHH
Confidence 5899999999999999998765433 679999999988765443212222111 1111 111 12789
Q ss_pred HHHHHHHHHHhcCCceeEEEEeCCCCCCC-cCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcC
Q 046900 186 ALEAAYKEAESKDMRVRGVLITNPSNPLG-ATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQY 264 (442)
Q Consensus 186 ~l~~~l~~~~~~~~~~~~v~l~~P~NPtG-~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~ 264 (442)
.+++.+.+ ++++|++++++||+| .+++.+.+++|.++|++|++++|+||+|.++.+.+. +.+......
T Consensus 174 ~l~~~i~~------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~-~~~~~~~~~---- 242 (396)
T PRK02627 174 ALKAAITD------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK-LFAYQHYGI---- 242 (396)
T ss_pred HHHHhcCC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc-eeeehhcCC----
Confidence 99988743 788999988899999 688999999999999999999999999998766553 222211111
Q ss_pred CCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 046900 265 KDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKR 342 (442)
Q Consensus 265 ~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 342 (442)
... +.||||.++ +|+|+||++++ +.+.+.+.. ....+..+++.|.++.+.++.... +++.++.++.....
T Consensus 243 --~pd---i~t~sK~~~-~G~rig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~~ 314 (396)
T PRK02627 243 --EPD---IMTLAKGLG-GGVPIGAVLAK-EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEE-EGLLENAAEVGEYL 314 (396)
T ss_pred --CCC---EEEEcchhh-CCcccEEEEEc-HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHH
Confidence 122 347999999 99999999995 556666543 233456788999998888864321 22233333333333
Q ss_pred HHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHH
Q 046900 343 YQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQ 421 (442)
Q Consensus 343 ~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e 421 (442)
++.+.+.+.+.+........|+++|++++. +..+++..|+++ ||.+.|+. .+++|++++ ..+++
T Consensus 315 ~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--------~~~~~~~~l~~~-Gv~v~~~~------~~~lRi~~~~~~~~~ 379 (396)
T PRK02627 315 RAKLRELLEKYPGIKEVRGLGLMIGIELDR--------PAAEIVKKALEK-GLLINVTG------DNVLRLLPPLIISKE 379 (396)
T ss_pred HHHHHHHHHhCCCeeeeccCcEEEEEEecC--------cHHHHHHHHHHC-CeEEeecC------CCEEEEECCcccCHH
Confidence 344444443332211223356789998832 257889999888 99999863 367999875 44899
Q ss_pred HHHHHHHHHHHHHHHH
Q 046900 422 TLEVALKRIHNFMQKR 437 (442)
Q Consensus 422 ~i~~~l~~l~~~l~~~ 437 (442)
++++++++|.+++++.
T Consensus 380 ~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 380 EIDEAVDRLEEVLKEL 395 (396)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999988653
No 129
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=8.5e-28 Score=234.31 Aligned_cols=300 Identities=15% Similarity=0.189 Sum_probs=207.2
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD 175 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~ 175 (442)
-+.++++++|++++ + +++++|+|+++++..++.+++++||.|+++.++|......++. .|++++.++.+
T Consensus 45 ~~~~l~~~la~~~g--------~--~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~~v~~~ 113 (361)
T cd06452 45 PIKDFHHDLAEFLG--------M--DEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYVAAER-AGLNVREVPNT 113 (361)
T ss_pred hHHHHHHHHHHHcC--------C--ceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHHHHHh-cCCEEEEEecC
Confidence 35788999999875 3 7899999999999999999999999999999988777666774 89999999998
Q ss_pred CCCCCcCCHHHHHHHHHHHHhc-CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc
Q 046900 176 SSNNFQITPQALEAAYKEAESK-DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~-~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s 254 (442)
.++.|.+|++.+++++++..+. +.+++++++++|+||||.+.+ +++|+++|+++++++|+|++|+.. .. ..+
T Consensus 114 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g---~~-~~~ 186 (361)
T cd06452 114 GHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AKKIAKVCHEYGVPLLLNGAYTVG---RM-PVS 186 (361)
T ss_pred CCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HHHHHHHHHHcCCeEEEECCcccC---Cc-CCC
Confidence 7656889999999998753211 236789999999999998866 778888899999999999999842 11 122
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcH----------HHHHHHHHHhcC
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISS----------QTQYLLASMLSN 324 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~----------~~q~~~~~~l~~ 324 (442)
...+ +..++++|+||.++ ++.|+||++++ +.+.+.+.+...++.++. ..+.++.+.+.
T Consensus 187 ~~~~---------~~d~~~~s~~K~l~-~~~~~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~- 254 (361)
T cd06452 187 GKEL---------GADFIVGSGHKSMA-ASAPIGVLATT-EEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFP- 254 (361)
T ss_pred HHHc---------CCCEEEecCCcccc-CCCCeEEEEEC-HHHHHHHhccccccccceeeeeccccCchHHHHHHHHHH-
Confidence 2222 34588999999997 66699999995 555555554333221111 11222222222
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec--CCceEEEEEecCCcccc--cChhhHHHHHHHHHHcCcEEEeC
Q 046900 325 KKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK--GNAGLFCWMNLSPLLEE--QTREGELALWDSMLHEVKLNISP 399 (442)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~gi~v~p 399 (442)
+..++++...+. .++++++.+.|+++ |+++.. +....++.++.+..... .......++.+.|+++ ||.+.+
T Consensus 255 --~~~~~~~~~~~~-~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~~~~ 330 (361)
T cd06452 255 --HVKERVKRWDEE-VEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKR-GIHGIK 330 (361)
T ss_pred --HHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHc-CceEEc
Confidence 222333333333 33457888999988 888762 22333566666521100 0001234688888776 998532
Q ss_pred CCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 400 GSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 400 g~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
. ....++|++....++++++.+++.|+++.
T Consensus 331 ----~-~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 331 ----P-GLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred ----C-CCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 1 23458999983337899999999998764
No 130
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=7.3e-28 Score=238.67 Aligned_cols=304 Identities=16% Similarity=0.152 Sum_probs=211.6
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcE
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIK 168 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~ 168 (442)
|+....+.+|++++|++++ .++.|++++|+ +++..++..+.. +||.|+++.+.|..+...++. .|++
T Consensus 87 ~~~~~~~~~Le~~la~~~g---------~~~~i~~~sG~-~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~-~g~~ 155 (410)
T PRK13392 87 SGTSHPHVLLERELADLHG---------KESALLFTSGY-VSNDAALSTLGKLLPGCVILSDALNHASMIEGIRR-SGAE 155 (410)
T ss_pred ccChHHHHHHHHHHHHHhC---------CCCEEEECcHH-HHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHH-cCCe
Confidence 3333346788888888875 24667777774 666666666643 889888887788777777774 8988
Q ss_pred EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 169 v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
+..++.+ |.+.+++.++... ..++++|++++|+||||.+++ +++|.++|+++++++|+||+|+...++
T Consensus 156 ~~~~~~~-------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g 223 (410)
T PRK13392 156 KQVFRHN-------DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYG 223 (410)
T ss_pred EEEEeCC-------CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcC
Confidence 7776532 5566777665421 236789999999999999998 778888888999999999999954443
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc----CCCcHHHHHHHHHHhcC
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF----TLISSQTQYLLASMLSN 324 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~ 324 (442)
.. ...+.....- .....++++||||+||++| ||+++ ++.+.+.+++.... ...+++.+.++.+.|+.
T Consensus 224 ~~-g~g~~~~~~~----~~~~div~~tlsK~~g~~G---G~~~~-~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~ 294 (410)
T PRK13392 224 AR-GGGIAERDGL----MDRIDMIQGTLAKAFGCLG---GYIAA-SADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRH 294 (410)
T ss_pred CC-CCchhhhccC----CCCCcEEEEEChHhhhccc---chhhc-CHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHH
Confidence 22 1222211110 0122377899999999888 99988 56677666654432 22445677777777764
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCC
Q 046900 325 KKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCH 404 (442)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~ 404 (442)
... ....++.++++++++.+.|++.|+++.+++++++ .+.++.. ....+++++|++++||.+.++....
T Consensus 295 ~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~-~i~~~~~------~~~~~~~~~L~~~~GI~v~~~~~p~ 363 (410)
T PRK13392 295 LKT----SQTERDAHQDRVAALKAKLNANGIPVMPSPSHIV-PVMVGDP------TLCKAISDRLMSEHGIYIQPINYPT 363 (410)
T ss_pred Hhc----CHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCEE-EEEeCCH------HHHHHHHHHHHHhCCEEEeeeCCCC
Confidence 221 2345677889999999999998988877777754 3333321 1356788888866699999865432
Q ss_pred C-CCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 405 C-SEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 405 ~-~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
. .+..++||++. ..++++++++++.|.+++++.
T Consensus 364 ~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 364 VPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 2 23468999985 228999999999999987653
No 131
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.96 E-value=2.3e-27 Score=233.14 Aligned_cols=330 Identities=14% Similarity=0.143 Sum_probs=214.1
Q ss_pred CCCceeeeecc--cccccH--HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 46 NPSGVIQMGLA--ENQVSF--DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 46 ~~~~~i~l~~~--~n~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
....+|||..+ .|++++ +.+.+.+.+...... .....|+ .+.++.+++.+.+.++ .+
T Consensus 25 ~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--------~~~~~~~-----~~~~~~l~~~la~~~g------~~ 85 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLV--------HVSNLYY-----TEPQEELAEKLVEHSG------AD 85 (379)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcc--------ccccccC-----CHHHHHHHHHHHhhCC------CC
Confidence 34578899875 455543 455544443322100 0011232 2344455555554433 35
Q ss_pred cEEEecChHHHHHHHHHhhc---C----CCCeEEEcCCCCcChHHhHhhhcCcEEE----EEecCCCCCCcC--CHHHHH
Q 046900 122 RIVVTAGATAANELLTFILA---D----PGDALLVPTPYYPGFDRDLRWRTGIKIV----PIHCDSSNNFQI--TPQALE 188 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~---~----~gd~Vl~~~p~y~~~~~~~~~~~G~~v~----~v~~~~~~~~~~--d~~~l~ 188 (442)
++++++|+++++..+++++. . ++|.|++++|+|..+...+.. .+.... ..++..+..+.. |++.++
T Consensus 86 ~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 164 (379)
T TIGR00707 86 RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALS-ATGQPKYQKGFEPLVPGFSYAPYNDIESLK 164 (379)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHH-hcCChhhhccCCCCCCCceeeCCCCHHHHH
Confidence 99999999999999887652 2 379999999999988766553 343321 122222111111 789999
Q ss_pred HHHHHHHhcCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCC
Q 046900 189 AAYKEAESKDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDS 267 (442)
Q Consensus 189 ~~l~~~~~~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~ 267 (442)
+.+.+ ++++|+++.++||+|.. ++.+++++|.++|+++++++|+||+|.++.+.+. +.+.... . ..
T Consensus 165 ~~~~~------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~-~~~~~~~-~-----~~ 231 (379)
T TIGR00707 165 KAIDD------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGK-FFAYEHY-G-----IE 231 (379)
T ss_pred HHhhh------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch-hhhHHhc-C-----CC
Confidence 98865 67888886556777764 6899999999999999999999999998765443 1121111 1 11
Q ss_pred CcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Q 046900 268 ERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQM 345 (442)
Q Consensus 268 ~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (442)
.++ .+|||.++ +|+|+||+++ ++.+.+.+... ...+..++++|.++.+.|+... . .+.++.++++++.
T Consensus 232 ~d~---~t~sK~~~-~G~riG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~---~--~~~~~~~~~~~~~ 301 (379)
T TIGR00707 232 PDI---ITLAKGLG-GGVPIGATLA-KEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE---K--ERLLENVKEKGDY 301 (379)
T ss_pred CCE---EEEccccc-CCcccEEEEE-cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---h--hhHHHHHHHHHHH
Confidence 233 37899999 9999999999 46666666542 2335578889999887775211 1 1234455556666
Q ss_pred HHHHHHhC----CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCH
Q 046900 346 IIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSE 420 (442)
Q Consensus 346 l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~ 420 (442)
+.+.|.+. ++... +..|+++|++++. +..++.+.|.++ ||.+.|+. .+++|++++ ..++
T Consensus 302 ~~~~l~~~~~~~~~~~~-~~~g~~~~~~~~~--------~~~~~~~~l~~~-Gv~v~~~~------~~~lRi~~~~~~t~ 365 (379)
T TIGR00707 302 FKERLEELGKNYPNKEV-RGKGLMLGIELEA--------PCKDIVKKALEK-GLLVNCAG------PKVLRFLPPLIITK 365 (379)
T ss_pred HHHHHHHHHhhCCCCcc-ccCceEEEEEecC--------cHHHHHHHHHHC-CcEEeeCC------CCEEEEECCCcCCH
Confidence 66666543 32212 2357788988764 146778887665 99999842 368999975 2489
Q ss_pred HHHHHHHHHHHHHH
Q 046900 421 QTLEVALKRIHNFM 434 (442)
Q Consensus 421 e~i~~~l~~l~~~l 434 (442)
+++++++++|++++
T Consensus 366 ~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 366 EEIDEAVSALEEAI 379 (379)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998763
No 132
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.96 E-value=4.2e-27 Score=228.69 Aligned_cols=295 Identities=18% Similarity=0.190 Sum_probs=204.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS 176 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~ 176 (442)
..++++.++++++ . ++ .++++++++++..++.+++++||.|+++.|+|+.+...+.. .|++++.++.
T Consensus 48 ~~~l~~~la~~~~--------~-~~-~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~~~~~-- 114 (349)
T cd06454 48 HEELEEELAEFHG--------K-EA-ALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDGIRL-SGAKKRIFKH-- 114 (349)
T ss_pred HHHHHHHHHHHhC--------C-CC-EEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHH-cCCceEEecC--
Confidence 3555666665543 2 23 45555567788888888899999999999999998888874 8999888752
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 177 SNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 177 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
+|++.+++.+++.. +..+++++++++|+||||...+ +++|+++|+++|+++|+|++|+...+... .....
T Consensus 115 -----~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~-~~~~~ 184 (349)
T cd06454 115 -----NDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPH-GRGVE 184 (349)
T ss_pred -----CCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCC-CCChh
Confidence 47788998887532 1235678888899999999877 77888999999999999999975333211 11111
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc-c---CCCcHHHHHHHHHHhcCchhHHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS-F---TLISSQTQYLLASMLSNKKFTENYI 332 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~-~---~~~s~~~q~~~~~~l~~~~~~~~~~ 332 (442)
.... ...+.+++++|+||.++.+| ||++++ +.+.+.+..... + +..+++.+.++.+.++.. .+ .
T Consensus 185 ~~~~----~~~~~~i~~~s~sK~~~~~g---G~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~-~ 252 (349)
T cd06454 185 EFGG----LTDDVDIIMGTLGKAFGAVG---GYIAGS-KELIDYLRSYARGFIFSTSLPPAVAAAALAALEVL---QG-G 252 (349)
T ss_pred hhcc----ccccCcEEEeechhhhcccC---CEEECC-HHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHH---hc-C
Confidence 1111 11366788999999998655 999884 555544443221 2 234555555555555422 11 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC-CCCCEE
Q 046900 333 KTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC-SEPGWF 411 (442)
Q Consensus 333 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~-~~~~~i 411 (442)
+..+++++++++.+.+.|.+.|+++..+.++++.++.++.. .+..++++.|+++ ||.+.++..... ...+++
T Consensus 253 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~i 325 (349)
T cd06454 253 PERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDP------AKAVAFSDALLER-GIYVQAIRYPTVPRGTARL 325 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCCh------HHHHHHHHHHHhC-CceEEEecCCccCCCCCeE
Confidence 45678888999999999998888877665666666544421 1357888898887 999998643211 124789
Q ss_pred EEEeec-CCHHHHHHHHHHHHHH
Q 046900 412 RVCFAN-MSEQTLEVALKRIHNF 433 (442)
Q Consensus 412 Rls~~~-~~~e~i~~~l~~l~~~ 433 (442)
|++++. .+++++++++++|+++
T Consensus 326 Ri~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 326 RISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEEeCCCCHHHHHHHHHHHHHh
Confidence 999973 4899999999999864
No 133
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=1.1e-26 Score=226.41 Aligned_cols=293 Identities=16% Similarity=0.200 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHHHHhCCCCccCC-CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEEEec
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDL-NRIVVTAGATAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~-~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~v~~ 174 (442)
.++++.++++++ +++ +.+++++|+++++..++.+++.+||.|+++.++|+. +...++ ..|++++.+|.
T Consensus 35 ~~~~~~la~~~g--------~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~ 105 (356)
T cd06451 35 DEILEGLRYVFQ--------TENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAE-RYGADVDVVEK 105 (356)
T ss_pred HHHHHHHHHHhc--------CCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHH-HhCCCeEEeec
Confidence 355555555554 434 457888889999999999999999999999988765 445566 48999999998
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s 254 (442)
++ .+.+|++.+++.+++ .+++++++++|+||||.+++ +++|.++|+++|+++++|++|+ ++.. ..+
T Consensus 106 ~~--~~~~~~~~l~~~i~~-----~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~~~li~D~~~~---~g~~-~~~ 171 (356)
T cd06451 106 PW--GEAVSPEEIAEALEQ-----HDIKAVTLTHNETSTGVLNP---LEGIGALAKKHDALLIVDAVSS---LGGE-PFR 171 (356)
T ss_pred CC--CCCCCHHHHHHHHhc-----cCCCEEEEeccCCCcccccC---HHHHHHHHHhcCCEEEEeeehh---ccCc-ccc
Confidence 75 357899999999864 26789999999999999998 6667888889999999999986 2221 122
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH----cc----------------cc-CCCcHH
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR----MS----------------SF-TLISSQ 313 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~----~~----------------~~-~~~s~~ 313 (442)
+... +..+++.|++|.++.| .++||++.++ .+.+.+.. .. .. ++.+..
T Consensus 172 ~~~~---------~~d~~~~s~~K~l~~p-~g~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 240 (356)
T cd06451 172 MDEW---------GVDVAYTGSQKALGAP-PGLGPIAFSE-RALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVN 240 (356)
T ss_pred cccc---------CccEEEecCchhccCC-CCcceeEECH-HHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHH
Confidence 2111 2235677899999844 4689999954 44444432 00 01 122333
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC---ceEEEEEecCCcccccChhhHHHHHHHHH
Q 046900 314 TQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN---AGLFCWMNLSPLLEEQTREGELALWDSML 390 (442)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~l~~~l~ 390 (442)
.+.++.+.++. .....++...++++++++++.+.|.+.|+++..+. ++.++|+.++... +..++++.|.
T Consensus 241 ~~~a~~aal~~--l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~L~ 312 (356)
T cd06451 241 LLYALREALDL--ILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGV------DGDEVVRRLM 312 (356)
T ss_pred HHHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCC------CHHHHHHHHH
Confidence 34444444432 11233566778888899999999998888776432 4556677776432 2567888887
Q ss_pred HcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHH
Q 046900 391 HEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFM 434 (442)
Q Consensus 391 ~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l 434 (442)
+++||.+.+|..+. .++++|++++. .+++++++++++|++++
T Consensus 313 ~~~gI~~~~g~~~~--~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 313 KRYNIEIAGGLGPT--AGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred HhCCEEEecccccc--cCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 76699999987532 34699999962 27999999999999876
No 134
>PRK02948 cysteine desulfurase; Provisional
Probab=99.96 E-value=1.5e-27 Score=234.53 Aligned_cols=297 Identities=15% Similarity=0.175 Sum_probs=211.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc----CCCCeEEEcCCCCcChHH---hHhhhcCcEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA----DPGDALLVPTPYYPGFDR---DLRWRTGIKI 169 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~----~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v 169 (442)
+.++|+.+|++++ +++++|++|+|+++++..++.+++ ++||.|+++...|+.+.. .++ ..|+++
T Consensus 45 ~~~~r~~la~~~g--------~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~-~~g~~v 115 (381)
T PRK02948 45 LQVCRKTFAEMIG--------GEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLE-SQGYTV 115 (381)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHH-hCCCEE
Confidence 4566777777764 578899999999999999888775 578999999977766544 345 379999
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
..+++++ ++.+|++.|++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++++|+++. ++.
T Consensus 116 ~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~---~g~ 181 (381)
T PRK02948 116 TEIPVDK--SGLIRLVDLERAITP------DTVLASIQHANSEIGTIQP---IAEIGALLKKYNVLFHSDCVQT---FGK 181 (381)
T ss_pred EEEeeCC--CCCCCHHHHHHhcCC------CCEEEEEECCcCCcEeehh---HHHHHHHHHHcCCEEEEEChhh---ccc
Confidence 9999874 356899999998864 6789999999999999998 6678888889999999998765 222
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHH-HHHHHH-----HccccCCCcHHHHHHHHHHhc
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDK-VVTTAR-----RMSSFTLISSQTQYLLASMLS 323 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~-~~~~~~-----~~~~~~~~s~~~q~~~~~~l~ 323 (442)
. ...+.. .+..+++.|+||.+|.+| +|+++++++. +..... ....+++.+.+.+.++.++++
T Consensus 182 ~-~~~~~~---------~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~ 249 (381)
T PRK02948 182 L-PIDVFE---------MGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAE 249 (381)
T ss_pred c-ccCccc---------CCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHH
Confidence 1 111111 245577899999999888 7998875432 111100 001235677788888877776
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEE-----EecCCcccccChhhHHHHHHHHHHcCcEEEe
Q 046900 324 NKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCW-----MNLSPLLEEQTREGELALWDSMLHEVKLNIS 398 (442)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~ 398 (442)
. ..+++++.++++++.++++.+.|++.|+++.......+.. +.++.. +..++...|. ++||.++
T Consensus 250 ~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~l~-~~gI~v~ 318 (381)
T PRK02948 250 N---ILKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKGI-------EGQYTMLECN-RRGIAIS 318 (381)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCCC-------CHHHHHHhcc-cCCEEEE
Confidence 3 2345777889999999999999998887665432111211 122211 2455666664 4599999
Q ss_pred CCCCCCC-----------------CCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHHHh
Q 046900 399 PGSSCHC-----------------SEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 399 pg~~f~~-----------------~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+|+.+.. ...+++|+|++. .++++++++++.|+++++++-+
T Consensus 319 ~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 377 (381)
T PRK02948 319 TGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFYR 377 (381)
T ss_pred chHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 9885321 013689999982 2799999999999999876543
No 135
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=2.4e-26 Score=227.65 Aligned_cols=294 Identities=18% Similarity=0.226 Sum_probs=208.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCccC-CCcEEEecChHHHHHHHHHhh----cCCCCeEEEcCCCCcChH----HhHhhhcC
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFD-LNRIVVTAGATAANELLTFIL----ADPGDALLVPTPYYPGFD----RDLRWRTG 166 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~-~~~i~~t~G~~~ai~~~~~~l----~~~gd~Vl~~~p~y~~~~----~~~~~~~G 166 (442)
.+.++|+.++++++ ++ +++|++|+|+++++.+++.++ .++||.|+++++.|+... ..+. ..|
T Consensus 63 ~~~~~r~~ia~~~~--------~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-~~g 133 (403)
T TIGR01979 63 AYEAVREKVAKFIN--------AASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAE-RTG 133 (403)
T ss_pred HHHHHHHHHHHHhC--------cCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHH-hcC
Confidence 46789999999876 44 679999999999999998875 578999999999887633 3444 379
Q ss_pred cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 167 ~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
++++.+++++ ++.+|++.+++.+.+ +++++++++|+||||.+++ +++|.++|+++|+++|+|++|+...
T Consensus 134 ~~~~~v~~~~--~~~~~~~~l~~~i~~------~~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~ 202 (403)
T TIGR01979 134 ATLKFIPLDD--DGTLDLDDLEKLLTE------KTKLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH 202 (403)
T ss_pred cEEEEEecCC--CCCCCHHHHHHHhcc------CCeEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc
Confidence 9999999874 356899999998865 7899999999999999999 6788888999999999999997422
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc---------------------
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS--------------------- 305 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--------------------- 305 (442)
...++... +..+++.|++|.+|.+| +||++++ +.+.+.+....
T Consensus 203 ----~~~~~~~~---------~~d~~~~s~~K~~gp~G--~g~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 266 (403)
T TIGR01979 203 ----MPVDVQAL---------DCDFYVFSGHKMYGPTG--IGVLYGK-EELLEQMPPFLGGGEMIAEVSFEETTYNEAPH 266 (403)
T ss_pred ----cccCcccc---------CCCEEEEecccccCCCC--ceEEEEc-hHHHhcCCCeecCCCceeecccCccccCCChh
Confidence 11222211 34578899999998666 8999885 44443332110
Q ss_pred c--cCCCcHHHHHHHHHHhcCchhHHH-HHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC-----ceEEEEEecCCcccc
Q 046900 306 S--FTLISSQTQYLLASMLSNKKFTEN-YIKTNRERLQKRYQMIIEGLRSA-GIECLKGN-----AGLFCWMNLSPLLEE 376 (442)
Q Consensus 306 ~--~~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-----~g~~~~~~~~~~~~~ 376 (442)
. .+..+.....++.+.++ ++.+ ..+..+++..+.++.+.+.|++. |+++..|. ++ ++.+.++..
T Consensus 267 ~~~~gt~~~~~~~al~~al~---~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~-~v~~~~~~~--- 339 (403)
T TIGR01979 267 KFEAGTPNIAGVIGLGAAID---YLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGG-IISFNVEGV--- 339 (403)
T ss_pred hcCCCCccHHHHHHHHHHHH---HHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCc-eEEEEeCCc---
Confidence 0 01223334444444443 2121 24556777888888898988876 78877643 45 444556542
Q ss_pred cChhhHHHHHHHHHHcCcEEEeCCCCCCC------CCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHH
Q 046900 377 QTREGELALWDSMLHEVKLNISPGSSCHC------SEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 377 ~~~~~~~~l~~~l~~~~gi~v~pg~~f~~------~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~ 437 (442)
+..++.+.| +++||.+.+|..+.. ..++++|||++. .++++++++++.|+++++.+
T Consensus 340 ----~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 340 ----HPHDVGTIL-DEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred ----CHHHHHHHH-hhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 134566655 455999998764311 125789999972 27899999999999877653
No 136
>PRK07049 methionine gamma-lyase; Validated
Probab=99.96 E-value=3.4e-26 Score=225.76 Aligned_cols=226 Identities=20% Similarity=0.303 Sum_probs=171.9
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---h
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---R 164 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~ 164 (442)
..+|+.+ -...|++++|++.+ .+++++++|+++++..++.+++++||+|+++.|+|+.+...+.. .
T Consensus 77 y~R~~~P-t~~~Le~~lA~leg----------~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~ 145 (427)
T PRK07049 77 YSRFNHP-NSEIVEDRLAVYEG----------AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRN 145 (427)
T ss_pred ccCCCCc-CHHHHHHHHHHHhC----------CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHh
Confidence 3567665 35899999999874 45788899999999999999999999999999999999765421 3
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHh---cCcEEEEecc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATR---KNIHLVSDEI 241 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~---~~~~vi~De~ 241 (442)
.|++++.++.. .|++.+++.+.+... ..++|+|++++|+||||.+++.+++.+|++.|+. +++++|+||+
T Consensus 146 ~Gi~~v~~~~~------~d~~~l~~~l~~~~~-~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDet 218 (427)
T PRK07049 146 FGVGAVGFADG------LSEAAIGAAAEAAAA-KGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNT 218 (427)
T ss_pred cCcEEEEEeCC------CCHHHHHHHHHhhcc-CCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECC
Confidence 79988777621 467888877754311 1368999999999999999999999999998654 6899999999
Q ss_pred CCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHH
Q 046900 242 YSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLL 318 (442)
Q Consensus 242 y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~ 318 (442)
|....+. .++ . .+..++++|+||.+| .+|+|+||+++ ++.+.+.++..... ..++++.|.++
T Consensus 219 y~~~~~~----~pl-~---------~g~divv~S~SK~~gG~~glr~G~vv~-~~~l~~~l~~~~~~~g~~ls~~~a~l~ 283 (427)
T PRK07049 219 LLGPVFQ----KPL-E---------HGADLSVYSLTKYVGGHSDLVAGAVLG-RKALIRQVRALRSAIGTQLDPHSCWML 283 (427)
T ss_pred ccccccC----Ccc-c---------cCCCEEEEcCceeecCCCCcEEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 8754321 111 1 134588899999998 69999999998 45666666554443 34778888888
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 319 ASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
...++. +....++..++++.+.+.|+++
T Consensus 284 ~r~L~t-------l~~R~~~~~~~a~~la~~L~~~ 311 (427)
T PRK07049 284 GRSLET-------LVLRMERANRNARAVAEFLRDH 311 (427)
T ss_pred HcCCCh-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 777753 2333455588899999999886
No 137
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=2.2e-26 Score=229.04 Aligned_cols=297 Identities=16% Similarity=0.207 Sum_probs=210.8
Q ss_pred chHHHHHHHHHHHHHHhCCCCccC-CCcEEEecChHHHHHHHHHh----hcCCCCeEEEcCCCCcCh----HHhHhhhcC
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFD-LNRIVVTAGATAANELLTFI----LADPGDALLVPTPYYPGF----DRDLRWRTG 166 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~-~~~i~~t~G~~~ai~~~~~~----l~~~gd~Vl~~~p~y~~~----~~~~~~~~G 166 (442)
.+.++|+++|++++ ++ +++|++|+|+++++..++.+ .+++||+|+++.+.|+.. ...++ ..|
T Consensus 77 ~~~~~r~~la~~~~--------~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~-~~g 147 (424)
T PLN02855 77 AYELARKKVAAFIN--------ASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQ-KTG 147 (424)
T ss_pred HHHHHHHHHHHHcC--------CCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHH-HcC
Confidence 35688999999876 33 57999999999999999876 367899999999988753 33445 379
Q ss_pred cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 167 ~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
++++.++++.++ .+|++.+++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++++|++|+.
T Consensus 148 ~~v~~v~~~~~~--~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~-- 214 (424)
T PLN02855 148 AVLKFVGLTPDE--VLDVEQLKELLSE------KTKLVATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSV-- 214 (424)
T ss_pred CEEEEEecCCCC--CcCHHHHHHHhcc------CceEEEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhc--
Confidence 999999987543 4889999999865 7899999999999999999 66788889999999999999963
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc---------------------
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS--------------------- 305 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--------------------- 305 (442)
+.....+..+ +..+++.|++|.+|.+| +||+++++ .+.+.+....
T Consensus 215 --g~~~~~~~~~---------~~d~~~~s~~K~~gp~G--~G~l~~~~-~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~ 280 (424)
T PLN02855 215 --PHMPVDVQTL---------GADFLVASSHKMCGPTG--IGFLWGKS-DLLESMPPFLGGGEMISDVFLDHSTYAPPPS 280 (424)
T ss_pred --CCcCCCchhc---------CCCEEEeecccccCCCc--cEEEEEch-hhhhcCCCEecCCCceeeeecCccccCCChh
Confidence 2112222222 23367899999887555 89999854 4433332110
Q ss_pred --ccCCCcHHHHHHHHHHhcCchhH-HHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC------ceEEEEEecCCccc
Q 046900 306 --SFTLISSQTQYLLASMLSNKKFT-ENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGN------AGLFCWMNLSPLLE 375 (442)
Q Consensus 306 --~~~~~s~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~------~g~~~~~~~~~~~~ 375 (442)
..++.+.....++.++++ ++ +..+++.+++.++.++++.+.|++. |+++..+. .+.++.+.++..
T Consensus 281 r~e~GT~~~~~~~~l~~al~---~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~-- 355 (424)
T PLN02855 281 RFEAGTPAIGEAIGLGAAID---YLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGI-- 355 (424)
T ss_pred hccCCChHHHHHHHHHHHHH---HHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCc--
Confidence 011122233333334443 21 1235666777888888899998876 77776432 123555666542
Q ss_pred ccChhhHHHHHHHHHHcCcEEEeCCCCCCC------CCCCEEEEEee--cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 376 EQTREGELALWDSMLHEVKLNISPGSSCHC------SEPGWFRVCFA--NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 376 ~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~------~~~~~iRls~~--~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
...++.+.|.+++||.++.|..+.. ..++++|+|+. + +++|++++++.|+++++.++.
T Consensus 356 -----~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~yn-t~~di~~l~~~l~~~~~~~~~ 421 (424)
T PLN02855 356 -----HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYN-TKEEVDAFIHALKDTIAFFSS 421 (424)
T ss_pred -----CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCC-CHHHHHHHHHHHHHHHHHHHh
Confidence 2456777776666999998875421 12468999996 4 899999999999999987654
No 138
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=7.6e-26 Score=220.32 Aligned_cols=294 Identities=17% Similarity=0.196 Sum_probs=208.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCC--cEEEecChHHHHHHHHHhhcCCCCeEEEcCCC-CcC-hHHhHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLN--RIVVTAGATAANELLTFILADPGDALLVPTPY-YPG-FDRDLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~--~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~-y~~-~~~~~~~~~G~~v~~v 172 (442)
...+|+.++++++ ++++ .|++++|+++++..++.+++.++|.|++..+. |+. +...++ ..|++++.+
T Consensus 33 ~~~~~~~la~~~~--------~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~-~~g~~~~~i 103 (355)
T TIGR03301 33 TDQVRDRLLALAG--------GDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICE-YLGIPHTDL 103 (355)
T ss_pred HHHHHHHHHHHhc--------CCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHH-HcCCceEEE
Confidence 4677777777765 3443 68889999999999999998888887766555 443 445566 489999999
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+.+. ++.+|++.+++.+++ ..+++++++++|+||||.+.+ +++|+++|++|++++|+|++++. +.. .
T Consensus 104 ~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~livD~~~s~---g~~-~ 170 (355)
T TIGR03301 104 NFSE--YEPPDLNRIEEALAA----DPDITHVATVHHETTTGILNP---LEAIAKVARSHGAVLIVDAMSSF---GAI-P 170 (355)
T ss_pred ecCC--CCCCCHHHHHHHHHh----CCCceEEEEEecCCcccchhH---HHHHHHHHHHcCCEEEEEecccc---CCc-c
Confidence 8764 356899999999875 135677888999999999987 78889999999999999998763 222 2
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccC-CCCCceeEEEeecCHHHHHHHHHc-------------------cccCCCcH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDL-GLPGFRVGTIYSYNDKVVTTARRM-------------------SSFTLISS 312 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~G~RiG~i~~~~~~~~~~~~~~-------------------~~~~~~s~ 312 (442)
.++... +..++++|++|.+ |.+| +||++++ +.+.+.+... ...+..+.
T Consensus 171 ~~~~~~---------~~d~~~~s~~K~l~~~~G--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 238 (355)
T TIGR03301 171 IDIEEL---------DVDALIASANKCLEGVPG--FGFVIAR-RDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPT 238 (355)
T ss_pred cchhhc---------CccEEEecCCcccccCCc--eeEEEEC-HHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcH
Confidence 222222 3447789999986 5555 6999995 4444444310 01234555
Q ss_pred HHHHHHHHHhcCchhHHH-HHHHHHHHHHHHHHHHHHHHHhCCCeeecC---CceEEEEEecCCcccccChhhHHHHHHH
Q 046900 313 QTQYLLASMLSNKKFTEN-YIKTNRERLQKRYQMIIEGLRSAGIECLKG---NAGLFCWMNLSPLLEEQTREGELALWDS 388 (442)
Q Consensus 313 ~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (442)
+.+.++...++... ++ ++++..++++++++++.+.|++.|+++..+ .+++++|+.++.... .+..++.+.
T Consensus 239 ~~~~a~~~al~~~~--~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 312 (355)
T TIGR03301 239 HTVYAFAQALEELE--AEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPD----FDFDDFYQE 312 (355)
T ss_pred HHHHHHHHHHHHHH--HcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCc----chHHHHHHH
Confidence 66666555554211 11 256667788899999999999888876543 345678888875211 024577888
Q ss_pred HHHcCcEEEeCCCCCCCCCCCEEEEEe-ecCCHHHHHHHHHHHHHHH
Q 046900 389 MLHEVKLNISPGSSCHCSEPGWFRVCF-ANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 389 l~~~~gi~v~pg~~f~~~~~~~iRls~-~~~~~e~i~~~l~~l~~~l 434 (442)
|.++ ||.+.+|..+. .+++||++ ...++++++++++.|++++
T Consensus 313 l~~~-gi~i~~~~~~~---~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 313 LKER-GFVIYPGKLTL---ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred HHHC-CEEEECCcccc---ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 7666 99999987553 27899997 4448999999999998753
No 139
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.96 E-value=2e-26 Score=226.95 Aligned_cols=294 Identities=15% Similarity=0.163 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh----cCCCC----eEEEcCCCCcChHHhHhhhcCcEEE
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL----ADPGD----ALLVPTPYYPGFDRDLRWRTGIKIV 170 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l----~~~gd----~Vl~~~p~y~~~~~~~~~~~G~~v~ 170 (442)
+....+++.+.+. ...+++++++|+++++..+++++ .++|| .|++.+++|+++...+.. .+....
T Consensus 73 ~~~~~la~~l~~~------~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~-~~~~~~ 145 (389)
T PRK01278 73 PEQERLAERLVEN------SFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIA-AGGQEK 145 (389)
T ss_pred hHHHHHHHHHHhh------CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHh-ccCChh
Confidence 3444555555542 12578999999999999998876 44666 899999999988766543 332222
Q ss_pred EEec-CC-CCCCc----CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCC-cCCCHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 171 PIHC-DS-SNNFQ----ITPQALEAAYKEAESKDMRVRGVLITNPSNPLG-ATIQRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 171 ~v~~-~~-~~~~~----~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG-~~~~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
.... .+ ..++. .|++.+++.+.+ ++++|+++.++||+| .+++.+.+++|.++|++||+++|+||+|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 219 (389)
T PRK01278 146 YLEGFGPLVPGFDQVPFGDIEALKAAITP------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC 219 (389)
T ss_pred hcccCCCCCCCceEeCCCCHHHHHHhhCC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 1110 00 11222 578999988853 788888887788898 78899999999999999999999999999
Q ss_pred cCCCCCCCccc-HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHH
Q 046900 244 GSAFSSSEFVS-IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLAS 320 (442)
Q Consensus 244 ~~~~~~~~~~s-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~ 320 (442)
.+.+.+..+.. ...+. ++ +.||||.++ +|+|+||++++ +.+.+.+.... ..+..+++.|.++.+
T Consensus 220 g~g~~g~~~~~~~~~~~-------pd----i~t~sK~l~-~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a 286 (389)
T PRK01278 220 GMGRTGKLFAHEWAGVT-------PD----IMAVAKGIG-GGFPLGACLAT-EEAAKGMTPGTHGSTYGGNPLAMAVGNA 286 (389)
T ss_pred CCCcCCcceeecccCCC-------CC----EEEEehhcc-CCcceEEEEEc-HHHHhccCCCCCCCCCCccHHHHHHHHH
Confidence 87665542211 11111 12 358999998 99999999994 55555554322 224567888888866
Q ss_pred HhcC---chhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEE
Q 046900 321 MLSN---KKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNI 397 (442)
Q Consensus 321 ~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v 397 (442)
.++. .++ .++++++.+.++++++.+.+.+.+. +.... ..|+++|++++. ++.+++.+|+++ ||.+
T Consensus 287 ~l~~l~~~~~-~~~~~~~~~~l~~~l~~l~~~~~~~-~~~v~-g~G~~~~i~~~~--------~~~~~~~~l~~~-GV~~ 354 (389)
T PRK01278 287 VLDVILAPGF-LDNVQRMGLYLKQKLEGLVDRFPDV-IEEVR-GKGLLLGLKCVV--------PNRDLVQALRDE-GLLT 354 (389)
T ss_pred HHHHHhhhHH-HHHHHHHHHHHHHHHHHHHhhCCCc-eeeEe-cccEEEEEEEec--------CHHHHHHHHHHC-CeEE
Confidence 6652 222 3445555566665555543322111 22223 367788888753 256889999888 9999
Q ss_pred eCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 398 SPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 398 ~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
.|+. .+++||+++ .++++++++++++|.+++.+
T Consensus 355 ~p~~------~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 355 VGAG------DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred eecC------CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 9863 468999975 34899999999999998864
No 140
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=5.2e-26 Score=208.85 Aligned_cols=341 Identities=18% Similarity=0.298 Sum_probs=250.7
Q ss_pred ceeeeecccc--cc---c-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCc-cCCC
Q 046900 49 GVIQMGLAEN--QV---S-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK-FDLN 121 (442)
Q Consensus 49 ~~i~l~~~~n--~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~~ 121 (442)
+.|||+++.- .- | .+.++++-+..... .....|.+..|.+.+++++++.+-. ...+ ++.+
T Consensus 27 ~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~----------~~~k~Yl~i~G~~~f~~~~~~llFG---~d~~~l~~~ 93 (396)
T COG1448 27 NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQ----------EKTKNYLPIEGLPEFLEAVQKLLFG---ADSPALAED 93 (396)
T ss_pred CeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcc----------ccccccCCcCCcHHHHHHHHHHhcC---CCcHHHHhh
Confidence 4579998852 11 1 35555544443322 1345799999999999999998742 1100 2233
Q ss_pred c--EEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 R--IVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~--i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
. -+-|.|+|.|+.+....+. .+...|.+++|+|+.+...+.. .|+++..+|.-+..+-.+|.+.+...|++..
T Consensus 94 Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~-aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~-- 170 (396)
T COG1448 94 RVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEA-AGLEVETYPYYDAETKGLDFDGMLADLKTAP-- 170 (396)
T ss_pred hHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHh-cCCceeeeeccccccccccHHHHHHHHHhCC--
Confidence 3 4567899999999987763 3556799999999999999994 9999999998666566799999999998753
Q ss_pred CCceeEEEEe-CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC-CcccHHHHHhhhcCCCCCcEEEEec
Q 046900 198 DMRVRGVLIT-NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS-EFVSIAEILEARQYKDSERVHIVYS 275 (442)
Q Consensus 198 ~~~~~~v~l~-~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~S 275 (442)
.-.+|+|- .+|||||.-++.+++++|+++.++.+.+.+.|-+|..|.-+.. ....+..+... ...+++..|
T Consensus 171 --~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~-----~~~~lva~S 243 (396)
T COG1448 171 --EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEV-----GPELLVASS 243 (396)
T ss_pred --CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHh-----CCcEEEEeh
Confidence 22345554 4589999999999999999999999999999999998654321 12223333332 234888999
Q ss_pred CcccCCCCCceeEEEe--ecCHHHHHHHH-H----ccc-cCCCcHHHHHHHHHHhcCchhHHHH---HHHHHHHHHHHHH
Q 046900 276 LSKDLGLPGFRVGTIY--SYNDKVVTTAR-R----MSS-FTLISSQTQYLLASMLSNKKFTENY---IKTNRERLQKRYQ 344 (442)
Q Consensus 276 ~SK~~g~~G~RiG~i~--~~~~~~~~~~~-~----~~~-~~~~s~~~q~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~ 344 (442)
|||.||+.|-|+|.+. +.+.+....+. + .++ +++.+.....+++.+|++++.-.+| +..+++++.+.|.
T Consensus 244 ~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~ 323 (396)
T COG1448 244 FSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQ 323 (396)
T ss_pred hhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999864 45554443322 1 222 3444556778888999987644444 5678999999999
Q ss_pred HHHHHHHhC----CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCH
Q 046900 345 MIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSE 420 (442)
Q Consensus 345 ~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~ 420 (442)
.|.+.|++. .+.+...+.|||.+..+.. +-..+|.+++||.+.. .| |||++.+++
T Consensus 324 ~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls~-----------~QV~rLree~~IY~v~--------sG--Ri~vaGl~~ 382 (396)
T COG1448 324 ALVDALKALGAPRNFDFIISQRGMFSYTGLSP-----------EQVDRLREEFGIYLVA--------SG--RINVAGLNT 382 (396)
T ss_pred HHHHHHHhhCCCcccchHhhcCceeecCCCCH-----------HHHHHHHHhccEEEec--------CC--eeeeccCCh
Confidence 999999984 4778889999999875433 4467788999999875 23 999998899
Q ss_pred HHHHHHHHHHHHH
Q 046900 421 QTLEVALKRIHNF 433 (442)
Q Consensus 421 e~i~~~l~~l~~~ 433 (442)
..++...+.|.++
T Consensus 383 ~ni~~va~ai~~v 395 (396)
T COG1448 383 SNIDYVAKAIAAV 395 (396)
T ss_pred hhHHHHHHHHHhh
Confidence 9999999988875
No 141
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.96 E-value=6.7e-26 Score=224.15 Aligned_cols=299 Identities=14% Similarity=0.115 Sum_probs=205.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcEEEEEe
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIKIVPIH 173 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~ 173 (442)
-..+|++++|++++ .+..++++++++++..++..+.. +++.|+.+...|......+.. .|+++..++
T Consensus 91 ~~~~Le~~la~~~g----------~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~-~g~~~~~~~ 159 (402)
T TIGR01821 91 PHVELEAELADLHG----------KESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRH-SGAEKFIFR 159 (402)
T ss_pred HHHHHHHHHHHHhC----------CCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHH-cCCeEEEEC
Confidence 35678888888764 23445555568888888887765 677777776667666666664 788776554
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
. .|++++++.++... ..++++|++++|+||||.+.+ +++|.++|++|++++|+||+|+...++.. ..
T Consensus 160 ~-------~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~-g~ 226 (402)
T TIGR01821 160 H-------NDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPR-GG 226 (402)
T ss_pred C-------CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCC-CC
Confidence 2 36788888886421 125788999999999999998 78888889999999999999985444321 11
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc----CCCcHHHHHHHHHHhcCchhHH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF----TLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
....... ...+..++++||||+||++| ||+++ ++.+.+.++..... ...++..+.++.+.++.. +
T Consensus 227 g~~~~~~----~~~~~div~~t~sKa~g~~G---G~i~~-~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~---~ 295 (402)
T TIGR01821 227 GIAERDG----LMHRIDIIEGTLAKAFGVVG---GYIAA-SRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHL---K 295 (402)
T ss_pred ccchhcc----CCCCCeEEEEechhhhccCC---ceeec-CHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHh---h
Confidence 1111110 00133577899999999888 99988 56666666543322 235566677766666532 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC-CC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS-EP 408 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~-~~ 408 (442)
+. ...++.+.++++++.+.|++.|+++.++.++ ++.+.++.. ..+.++++.|++++||.+.+....... +.
T Consensus 296 ~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-i~~i~~~~~------~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~ 367 (402)
T TIGR01821 296 ES-QDLRRAHQENVKRLKNLLEALGIPVIPNPSH-IVPVIIGDA------ALCKKVSDLLLNKHGIYVQPINYPTVPRGT 367 (402)
T ss_pred cC-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCCC-EEEEEeCCH------HHHHHHHHHHHhcCCEEEEeECCCCCCCCC
Confidence 11 3445566788899999999888887777666 555555431 135678888877679999985533222 34
Q ss_pred CEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 409 GWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 409 ~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.++||++. ..++++++++++.|++++++.
T Consensus 368 ~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 368 ERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 68999985 338999999999999988754
No 142
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=3.2e-26 Score=226.68 Aligned_cols=291 Identities=17% Similarity=0.235 Sum_probs=205.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHh----hcCCCCeEEEcCCCCcC----hHHhHhhhcCcE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFI----LADPGDALLVPTPYYPG----FDRDLRWRTGIK 168 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~----l~~~gd~Vl~~~p~y~~----~~~~~~~~~G~~ 168 (442)
..++|+++|++++. .++++|++|+|+++++..++.+ ++++||.|+++++.|++ +...++ ..|++
T Consensus 69 ~~~~r~~la~~~~~-------~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~-~~g~~ 140 (406)
T PRK09295 69 MENVRKQAALFINA-------RSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCA-RVGAE 140 (406)
T ss_pred HHHHHHHHHHHcCc-------CCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHH-HcCcE
Confidence 56888888888751 1578999999999999999876 46899999999998865 334445 37999
Q ss_pred EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 169 v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
++.++++. ++.+|++.|++.+.+ +++++++++|+||||.+++ +++|+++|+++|+++++|++|+...
T Consensus 141 v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~-- 207 (406)
T PRK09295 141 LRVIPLNP--DGTLQLETLPALFDE------RTRLLAITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMH-- 207 (406)
T ss_pred EEEEecCC--CCCCCHHHHHHhcCC------CcEEEEEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCc--
Confidence 99999875 346899999998864 7899999999999999999 6778888999999999999997422
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc----------------------c-
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM----------------------S- 305 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~----------------------~- 305 (442)
...++... +..+++.|++|.+|.+| +||+++++ .+.+.+... .
T Consensus 208 --~~~~~~~~---------~~D~~~~s~~K~~gp~G--~G~l~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r 273 (406)
T PRK09295 208 --HPVDVQAL---------DCDFYVFSGHKLYGPTG--IGILYVKE-ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWR 273 (406)
T ss_pred --cccCchhc---------CCCEEEeehhhccCCCC--cEEEEEch-HhHhhCCCcccCCceeeeeecCCccccCCchhh
Confidence 12222222 23377899999888666 79999854 443332210 0
Q ss_pred -ccCCCcHHHHHHHHHHhcCchhHHH-HHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC--ceEEEEEecCCcccccChh
Q 046900 306 -SFTLISSQTQYLLASMLSNKKFTEN-YIKTNRERLQKRYQMIIEGLRSA-GIECLKGN--AGLFCWMNLSPLLEEQTRE 380 (442)
Q Consensus 306 -~~~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~--~g~~~~~~~~~~~~~~~~~ 380 (442)
..++.+.....++.+.++ ++.+ -++..+++.++.++++.+.|.+. |+++..+. .+ .+.+.++..
T Consensus 274 ~e~GT~~~~~~~~l~~al~---~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~-iv~~~~~~~------- 342 (406)
T PRK09295 274 FEAGTPNTGGIIGLGAALD---YVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG-VIAFNLGKH------- 342 (406)
T ss_pred cCCCCccHHHHHHHHHHHH---HHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCce-EEEEEECCc-------
Confidence 012333444444444443 2222 24556677777888888988876 67776542 44 344455532
Q ss_pred hHHHHHHHHHHcCcEEEeCCCCCCC------CCCCEEEEEee--cCCHHHHHHHHHHHHHHHH
Q 046900 381 GELALWDSMLHEVKLNISPGSSCHC------SEPGWFRVCFA--NMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 381 ~~~~l~~~l~~~~gi~v~pg~~f~~------~~~~~iRls~~--~~~~e~i~~~l~~l~~~l~ 435 (442)
+..++...| +++||.++.|+.+.. ..++++|+|+. + +++|++.+++.|+++.+
T Consensus 343 ~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~yn-t~~did~l~~~l~~i~~ 403 (406)
T PRK09295 343 HAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYN-THEEVDRLVAGLQRIHR 403 (406)
T ss_pred CHHHHHHHH-HhCCeEEeccccchHHHHHHHCCCCEEEEEccCCC-CHHHHHHHHHHHHHHHH
Confidence 245566655 566999999886532 12468999997 4 88999999999988743
No 143
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.96 E-value=5.1e-26 Score=225.45 Aligned_cols=302 Identities=16% Similarity=0.138 Sum_probs=205.4
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcEEEE
Q 046900 94 YHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIKIVP 171 (442)
Q Consensus 94 ~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~ 171 (442)
..-+.+|++++|++++ .++.+++++| ++++..++..+.. +++.|+.....|......++. .|+++..
T Consensus 90 ~~~~~~l~~~la~~~g---------~~~~~~~~sG-~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~-~~~~~~~ 158 (407)
T PRK09064 90 NHYHVELERELADLHG---------KEAALVFTSG-YVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRR-SRCEKHI 158 (407)
T ss_pred HHHHHHHHHHHHHHhC---------CCcEEEECcH-HHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHH-cCCcEEE
Confidence 3345778888888764 2445555555 5676666666654 777777776667666666664 7877665
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++. .|++.+++.++... ..++++|++++|+||+|.+.+ +++|.++|+++++++|+||+|+...++..
T Consensus 159 ~~~-------~d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~- 225 (407)
T PRK09064 159 FRH-------NDVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPR- 225 (407)
T ss_pred ECC-------CCHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCC-
Confidence 553 37788888886421 136789999999999999988 77888889899999999999984444321
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc----CCCcHHHHHHHHHHhcCchh
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF----TLISSQTQYLLASMLSNKKF 327 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~~~~ 327 (442)
...+.....- ..+..++++||||+||++| ||+++ ++.+.+.+...... ...++..+.++.+.++ +
T Consensus 226 g~g~~~~~~~----~~~~div~~t~sKa~g~~G---G~~~~-~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~---~ 294 (407)
T PRK09064 226 GGGIAERDGL----MDRIDIIEGTLAKAFGVMG---GYIAG-SAALVDAVRSYAPGFIFTTSLPPAIAAAALASIR---H 294 (407)
T ss_pred CCChHHhcCC----CCCCeEEEEecchhhhccC---ceEec-CHHHHHHHHHhCccccccCcCCHHHHHHHHHHHH---H
Confidence 1122222110 1134688899999999888 99988 56666666543322 2334455555555443 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC-
Q 046900 328 TENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS- 406 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~- 406 (442)
+++. ...+++++++++++.+.|++.|+++.++.++ ++++.++.. ..+.++.+.|++++||.+.+...+...
T Consensus 295 ~~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-iv~i~~~~~------~~~~~l~~~L~~~~gi~v~~~~~p~~~~ 366 (407)
T PRK09064 295 LKES-NEERERHQERAAKLKAALDAAGIPVMPNESH-IVPVMVGDP------EKCKKASDMLLEEHGIYVQPINYPTVPR 366 (407)
T ss_pred HhcC-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-EEEEEeCCH------HHHHHHHHHHHHhCCEEEeeECCCCCCC
Confidence 2222 3346778889999999999888887766655 566665431 135778888877669999986533221
Q ss_pred CCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 407 EPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 407 ~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
+..++||+++ ..++++++++++.|++++++..
T Consensus 367 ~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~ 399 (407)
T PRK09064 367 GTERLRITPTPFHTDEMIDHLVEALVEVWARLG 399 (407)
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 3368999987 3389999999999999987654
No 144
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=3.4e-26 Score=226.15 Aligned_cols=288 Identities=16% Similarity=0.178 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh---cCCCCeEEEcCCCCcChH----HhHhhhcCcEEE
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL---ADPGDALLVPTPYYPGFD----RDLRWRTGIKIV 170 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l---~~~gd~Vl~~~p~y~~~~----~~~~~~~G~~v~ 170 (442)
.++|+.++++++ +++++|++++|+++++..++.++ +++||+|+++.|.|+... ..++ ..|++++
T Consensus 63 ~~l~~~ia~~~~--------~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~-~~g~~~~ 133 (397)
T TIGR01976 63 DDAREAVADLLN--------ADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAE-RAGAKVK 133 (397)
T ss_pred HHHHHHHHHHcC--------CCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHH-hcCCEEE
Confidence 466777777664 45668999999999998877665 679999999999987653 3345 3899999
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
.++++++ ++.+|++.+++.+++ +++++++++|+||||.+++ +++|+++|+++|+++++|+++.. +.
T Consensus 134 ~~~~~~~-~~~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~ 199 (397)
T TIGR01976 134 WARVDEA-TGELHPDDLASLLSP------RTRLVAVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PH 199 (397)
T ss_pred EEecccc-CCCcCHHHHHHhcCC------CceEEEEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cc
Confidence 9998753 356899999998864 7889999999999999988 77888889999999999999852 22
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc------------CCCcHH---HH
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF------------TLISSQ---TQ 315 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~------------~~~s~~---~q 315 (442)
....+... +..+++.|++|.+| .|+||++++ +.+.+.+...... ++.+.. +.
T Consensus 200 ~~~~~~~~---------~~d~~~~s~~K~~g---~~~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l 266 (397)
T TIGR01976 200 GLIDVQAT---------GADFLTCSAYKFFG---PHMGILWGR-PELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGV 266 (397)
T ss_pred cCCCHHHc---------CCCEEEEechhhcC---CceEEEEEc-HHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHH
Confidence 22222222 23366789999875 468999984 4555444322111 111211 22
Q ss_pred HHHHHHhcCchh---------HHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecC-----CceEEEEEecCCcccccChh
Q 046900 316 YLLASMLSNKKF---------TENYIKTNRERLQKRYQMIIEGLRSAG-IECLKG-----NAGLFCWMNLSPLLEEQTRE 380 (442)
Q Consensus 316 ~~~~~~l~~~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-----~~g~~~~~~~~~~~~~~~~~ 380 (442)
.++..++...+. +.+++++.+++..+.++++.+.|++.+ +++..+ .++ ++.+.++..
T Consensus 267 ~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------- 338 (397)
T TIGR01976 267 VAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVP-TVSFTVHGL------- 338 (397)
T ss_pred HHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCc-eEEEEeCCc-------
Confidence 233333332210 011245667777888889999998874 777654 344 555665431
Q ss_pred hHHHHHHHHHHcCcEEEeCCCCCCC---------CCCCEEEEEee-cCCHHHHHHHHHHH
Q 046900 381 GELALWDSMLHEVKLNISPGSSCHC---------SEPGWFRVCFA-NMSEQTLEVALKRI 430 (442)
Q Consensus 381 ~~~~l~~~l~~~~gi~v~pg~~f~~---------~~~~~iRls~~-~~~~e~i~~~l~~l 430 (442)
+..++.++|.++ ||.+..|..|.. ...+++|||+. ..++++++++++.|
T Consensus 339 ~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 339 PPQRVVRRLADQ-GIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CHHHHHHHHHHC-CeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 245788888665 999998876541 13468999996 22788899988764
No 145
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=1.2e-26 Score=229.32 Aligned_cols=334 Identities=15% Similarity=0.136 Sum_probs=221.2
Q ss_pred CCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+|||..+ .+.++ ++.+.+.+.+..... + .....|+...+ . ++++++.+..+ . .+
T Consensus 39 d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~----~----~~~~~~~~~~~-~----~la~~l~~~~~--~-~~ 102 (398)
T PRK03244 39 DVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATL----G----HVSNLFATEPQ-I----ALAERLVELLG--A-PE 102 (398)
T ss_pred ECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhc----c----CccCccCCHHH-H----HHHHHHHHhCC--C-CC
Confidence 3445678999765 34443 355555554433210 0 01123544332 3 44444444333 1 13
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCCCCCCcCCHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDSSNNFQITPQA 186 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~~~~~~~d~~~ 186 (442)
+++|++++|+++++..+++.+..+| +.|+..+++|.++........|. ++..+|. .|++.
T Consensus 103 ~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~ 175 (398)
T PRK03244 103 GGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDA 175 (398)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHH
Confidence 5799999999999999998776666 46777778998875433311232 1222221 37888
Q ss_pred HHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHH-HHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCC
Q 046900 187 LEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSV-LEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYK 265 (442)
Q Consensus 187 l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~-l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~ 265 (442)
+++.+.+ ++++|+++.++||||.+++.++ +++|.++|++||+++|+||+|..+...+..+ . .... .
T Consensus 176 l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~-~~~~-~---- 242 (398)
T PRK03244 176 LAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-A-HQHD-G---- 242 (398)
T ss_pred HHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-h-hhhh-C----
Confidence 9887743 7888999888999999997766 9999999999999999999998765544321 1 1111 1
Q ss_pred CCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 046900 266 DSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRY 343 (442)
Q Consensus 266 ~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 343 (442)
..+. +.+|||++| +|+|+||++++ +.+.+.+.. ....+..+++.+.++.+.|+... . .+..+++++++
T Consensus 243 ~~pD---i~t~sK~l~-~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~---~~~~~~~~~~~ 312 (398)
T PRK03244 243 VTPD---VVTLAKGLG-GGLPIGACLAF-GPAADLLTPGLHGSTFGGNPVACAAALAVLDTIA--S---EGLLENAERLG 312 (398)
T ss_pred CCCC---EEEEchhhh-CCcccEEEEEc-HHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHH--h---ccHHHHHHHHH
Confidence 0122 248899998 99999999995 556666543 22335678899999888876211 0 12345556667
Q ss_pred HHHHHHHHhCCCee--ecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec-CCH
Q 046900 344 QMIIEGLRSAGIEC--LKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN-MSE 420 (442)
Q Consensus 344 ~~l~~~L~~~g~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~ 420 (442)
+++.+.|++.+... .....|+++|+.++.. .+..+++.++++ ||.+.+. ....+|++++. .++
T Consensus 313 ~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~~-------~~~~~~~~l~~~-Gv~~~~~------~~~~iR~~p~~~~t~ 378 (398)
T PRK03244 313 EQLRAGIEALGHPLVDHVRGRGLLLGIVLTAP-------VAKAVEAAAREA-GFLVNAV------APDVIRLAPPLIITD 378 (398)
T ss_pred HHHHHHHHhcCCCceeeEeeccEEEEEEEecc-------HHHHHHHHHHHC-CeEEeec------CCCEEEEECCCcCCH
Confidence 77888888754432 1234678999998642 256788888776 9999873 23679999863 589
Q ss_pred HHHHHHHHHHHHHHHHH
Q 046900 421 QTLEVALKRIHNFMQKR 437 (442)
Q Consensus 421 e~i~~~l~~l~~~l~~~ 437 (442)
+++++++++|.+++.+.
T Consensus 379 ~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 379 AQVDAFVAALPAILDAA 395 (398)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998764
No 146
>PRK07179 hypothetical protein; Provisional
Probab=99.95 E-value=9.2e-26 Score=223.42 Aligned_cols=290 Identities=16% Similarity=0.145 Sum_probs=203.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD 175 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~ 175 (442)
...+|++.+|++++ .+.+++++|+++++..++++++.+||.|+++.+.|..+...+.. .|++++.++.
T Consensus 100 ~~~~le~~la~~~g----------~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~-~g~~~~~~~~- 167 (407)
T PRK07179 100 PKPQFEKKLAAFTG----------FESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRA-AGAQAHPFRH- 167 (407)
T ss_pred HHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHH-CCCeEEEecC-
Confidence 45788888888864 34678899999999999999999999999999999888777774 8888776642
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccH
Q 046900 176 SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSI 255 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~ 255 (442)
.|++.|++.+++. ++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|+...++. ...++
T Consensus 168 ------~d~~~l~~~l~~~-----~~~lV~v~~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~-~g~g~ 232 (407)
T PRK07179 168 ------NDVDHLRRQIERH-----GPGIIVVDSVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGP-QGAGL 232 (407)
T ss_pred ------CCHHHHHHHHHhc-----CCeEEEECCCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCC-CCCch
Confidence 4889999988641 4678888899999999999 6788888999999999999998543322 11122
Q ss_pred H-HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--C--CCcHHHHHHHHHHhcCchhHHH
Q 046900 256 A-EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--T--LISSQTQYLLASMLSNKKFTEN 330 (442)
Q Consensus 256 ~-~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~--~~s~~~q~~~~~~l~~~~~~~~ 330 (442)
. .+.. .....+++.|+||++| .|+||+++ ++.+.+.+...... + +.++....++.+.++.. +
T Consensus 233 ~~~~~~-----~~~vdi~~~S~sK~~g---~~~G~l~~-~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~----~ 299 (407)
T PRK07179 233 VAELGL-----TSRVHFITASLAKAFA---GRAGIITC-PRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI----E 299 (407)
T ss_pred HHhcCC-----CCCCCEEEeechHhhh---ccCeEEEe-CHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH----h
Confidence 2 1111 0122477899999996 26999998 45666665543322 1 11222222233333321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC----C
Q 046900 331 YIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC----S 406 (442)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~----~ 406 (442)
.....+++++++++++.+.|.+.|+++. +.+ .++++.++... ....+.+.|.++ ||.+. .|.. .
T Consensus 300 ~~~~~~~~l~~~~~~l~~~L~~~g~~v~-~~~-~i~~l~~~~~~------~~~~~~~~L~~~-GI~~~---~~~~p~~~~ 367 (407)
T PRK07179 300 SADDRRARLHANARFLREGLSELGYNIR-SES-QIIALETGSER------NTEVLRDALEER-NVFGA---VFCAPATPK 367 (407)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcCCCCC-CCC-CEEEEEeCCHH------HHHHHHHHHHHC-CceEe---eecCCCCCC
Confidence 1245678899999999999998888766 344 47777764311 245666676565 99743 2211 1
Q ss_pred CCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 407 EPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 407 ~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
..+++||+++ ..+++++++++++|++++.+.
T Consensus 368 ~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 368 NRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred CCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 3478999997 348999999999999988764
No 147
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.95 E-value=2.1e-25 Score=217.74 Aligned_cols=294 Identities=16% Similarity=0.170 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHHHHhCCCCccCC--CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcCh--HHhHhhhcCcEEEEEe
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDL--NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGF--DRDLRWRTGIKIVPIH 173 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~--~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~~G~~v~~v~ 173 (442)
.++|+.++++++ +++ ++|++|+|+++++..++.++..+||.+++..+++.+. ...++ ..|++++.++
T Consensus 38 ~~~r~~la~l~~--------~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~-~~g~~~~~v~ 108 (363)
T TIGR02326 38 EQIRQQLLALAT--------AEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAE-YLGIPHHVVD 108 (363)
T ss_pred HHHHHHHHHHhC--------CCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHH-HcCCceEEEe
Confidence 456666666654 444 4799999999999999999988998888776665544 34556 4899999999
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
+++ +..+|++.+++.+++. .+++++.+++++||||.+++ +++|.++|+++|+++|+|++++ ++.. ..
T Consensus 109 ~~~--~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~---~g~~-~~ 175 (363)
T TIGR02326 109 TGE--VEPPDVVEVEAILAAD----PAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSS---FGGI-PI 175 (363)
T ss_pred CCC--CCCCCHHHHHHHHhhC----CCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEcccc---ccCc-cc
Confidence 875 3458999999998751 24677888999999999998 6788999999999999999876 3332 23
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccC-CCCCceeEEEeecCHHHHHHHHH-cc-------------------ccCCCcH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDL-GLPGFRVGTIYSYNDKVVTTARR-MS-------------------SFTLISS 312 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~G~RiG~i~~~~~~~~~~~~~-~~-------------------~~~~~s~ 312 (442)
++.++ +.-+++.|++|.+ |.+| +||++++++.+.. +.. .. ..+..+.
T Consensus 176 ~~~~~---------~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~ 243 (363)
T TIGR02326 176 DIAEL---------HIDYLISSANKCIQGVPG--FGFVIARQAELAA-CKGNARSLSLDLYDQWRCMEDNHGKWRFTSPT 243 (363)
T ss_pred chhhc---------CccEEEecCccccccCCc--ceEEEECHHHHHH-hhcCCCceeecHHHHHHHHhccCCCCCCCCcH
Confidence 33333 2237789999987 4445 7999995444332 211 00 1124456
Q ss_pred HHHHHHHHHhcCchhHHH-HHHHHHHHHHHHHHHHHHHHHhCCCeeecC---CceEEEEEecCCcccccChhhHHHHHHH
Q 046900 313 QTQYLLASMLSNKKFTEN-YIKTNRERLQKRYQMIIEGLRSAGIECLKG---NAGLFCWMNLSPLLEEQTREGELALWDS 388 (442)
Q Consensus 313 ~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (442)
+.+.++.+.++.. ..+ .+++.+++++++++++.+.|++.|++...+ .++...|+.++.... .+..++.+.
T Consensus 244 ~~~~al~~al~~l--~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~ 317 (363)
T TIGR02326 244 HVVHAFAQALLEL--EKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPD----YRFADFYQR 317 (363)
T ss_pred HHHHHHHHHHHHH--HHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCC----CCHHHHHHH
Confidence 6666655555421 121 245677899999999999999888877543 455667787775310 024567777
Q ss_pred HHHcCcEEEeCCCCCCCCCCCEEEEEe-ecCCHHHHHHHHHHHHHHHH
Q 046900 389 MLHEVKLNISPGSSCHCSEPGWFRVCF-ANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 389 l~~~~gi~v~pg~~f~~~~~~~iRls~-~~~~~e~i~~~l~~l~~~l~ 435 (442)
|.++ ||.+.||..+. ..++||++ +..+.++++++++.|++++.
T Consensus 318 L~~~-gi~v~~g~~~~---~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 318 LKEQ-GFVIYPGKVSQ---VDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred HHHC-CEEEECCcCCC---CCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 7655 99999997652 46899996 54589999999999998764
No 148
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.95 E-value=5e-25 Score=215.57 Aligned_cols=298 Identities=17% Similarity=0.184 Sum_probs=206.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCC--CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcCh--HHhHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDL--NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGF--DRDLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~--~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~~G~~v~~v 172 (442)
+.++|+.++++++ .++ +.|++++|+++++..++.++..+||.|+++.++|.+. ...++ ..|++++.+
T Consensus 39 ~~~~~~~l~~l~~--------~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~-~~g~~~~~i 109 (368)
T PRK13479 39 TASVRAKLVAIAT--------GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAE-YLGIAHVVL 109 (368)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHH-HcCCcEEEE
Confidence 4677777777765 333 5688999999999999999999999999998887665 35566 489999999
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+.++ ++.+|++++++.+++. .+++++++++|+||||...+ +++|.++|+++++++|+|+++. ++.. .
T Consensus 110 ~~~~--~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~~livDa~~~---~g~~-~ 176 (368)
T PRK13479 110 DTGE--DEPPDAAEVEAALAAD----PRITHVALVHCETTTGILNP---LDEIAAVAKRHGKRLIVDAMSS---FGAI-P 176 (368)
T ss_pred ECCC--CCCCCHHHHHHHHHhC----CCCcEEEEEcccCccccccC---HHHHHHHHHHcCCEEEEEcccc---cCCc-c
Confidence 9874 3468999999988741 25678899999999999999 6788888889999999996664 3332 2
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccC-CCCCceeEEEeecCHHHHHHHHHcccc-------------------CCCcH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDL-GLPGFRVGTIYSYNDKVVTTARRMSSF-------------------TLISS 312 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~G~RiG~i~~~~~~~~~~~~~~~~~-------------------~~~s~ 312 (442)
.++... +.-+++.|++|.+ |.+| +||++++ +.+.+.+...... ++.+.
T Consensus 177 ~~~~~~---------~~d~~v~s~~K~l~g~~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 244 (368)
T PRK13479 177 IDIAEL---------GIDALISSANKCIEGVPG--FGFVIAR-RSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPT 244 (368)
T ss_pred cccccc---------CceEEEecCccccccCCC--ceEEEEC-HHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcH
Confidence 222222 2236678999975 6677 6999995 4444443322111 23344
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC---ceEEEEEecCCcccccChhhHHHHHHHH
Q 046900 313 QTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN---AGLFCWMNLSPLLEEQTREGELALWDSM 389 (442)
Q Consensus 313 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~l~~~l 389 (442)
+.+.++.+.++.... ..++++..++++++++++.+.|++.|+++..+. .+..+.+.++.... . +..++.+.|
T Consensus 245 ~~~~~l~~al~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~l~~~L 319 (368)
T PRK13479 245 HVVAAFYQALLELEE-EGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPA---Y-DFKEFYERL 319 (368)
T ss_pred HHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCC---c-CHHHHHHHH
Confidence 444444444432110 112456668889999999999999888765332 11122222332110 0 246788888
Q ss_pred HHcCcEEEeCCCCCCCCCCCEEEEEe-ecCCHHHHHHHHHHHHHHHHHH
Q 046900 390 LHEVKLNISPGSSCHCSEPGWFRVCF-ANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 390 ~~~~gi~v~pg~~f~~~~~~~iRls~-~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.++ ||.+.+|..+ ..+++|++. +..++++++++++.|+++++++
T Consensus 320 ~~~-gi~v~~g~~~---~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 320 KEQ-GFVIYPGKLT---QVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred HHC-CEEEecCCCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 777 9999998654 246899985 6458999999999999998765
No 149
>PLN02242 methionine gamma-lyase
Probab=99.95 E-value=3.1e-25 Score=218.16 Aligned_cols=287 Identities=15% Similarity=0.162 Sum_probs=199.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHh----hhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR----WRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~~G~~v~~ 171 (442)
-..+|++.+|++++ .+.+++++|+++++..++.+++++||.|+++.|.|+.+...+. ...|++++.
T Consensus 77 t~~~LE~~lA~l~g----------~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~ 146 (418)
T PLN02242 77 TVLNLGRQMAALEG----------TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTF 146 (418)
T ss_pred hHHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEE
Confidence 45788888888865 4567899999999999999999999999999999988866542 126888776
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++. .|++.+++++++ .++++|++++|+||||.+.+ +++|+++|++++++||+|++|..+.+.
T Consensus 147 ~d~-------~d~e~l~~~i~~-----~~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~--- 208 (418)
T PLN02242 147 VDI-------TDLEAVKKAVVP-----GKTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLS--- 208 (418)
T ss_pred cCC-------CCHHHHHHhcCc-----CCCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCC---
Confidence 653 278899988854 14899999999999999986 788899999999999999999865431
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce-eEEEeecCHHHHHHHHHccc----cCCCcHHHHHHHHHHhcCch
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR-VGTIYSYNDKVVTTARRMSS----FTLISSQTQYLLASMLSNKK 326 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R-iG~i~~~~~~~~~~~~~~~~----~~~~s~~~q~~~~~~l~~~~ 326 (442)
...+ +..++++|+||.++.+|++ .||++++ +.+.+.+..... ..+.+...|.+...++...
T Consensus 209 ---~~~~---------g~divv~S~SK~l~g~g~~~gG~iv~~-~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~- 274 (418)
T PLN02242 209 ---PARL---------GADVVVHSISKFISGGADIIAGAVCGP-AELVNSMMDLHHGALMLLGPTMNPKVAFELSERLP- 274 (418)
T ss_pred ---HHHc---------CCcEEEEeCccccCCCCCceEEEEEcC-HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCC-
Confidence 1112 3458899999999888987 5999884 555555554322 2333444566665555433
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC-------------------ceEEEEEecCCcccccChhhHHHHHH
Q 046900 327 FTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN-------------------AGLFCWMNLSPLLEEQTREGELALWD 387 (442)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-------------------~g~~~~~~~~~~~~~~~~~~~~~l~~ 387 (442)
. +..+.+++.++++.+.+.|+++++++..|. .|-.+.+++.. .+.+..+++
T Consensus 275 t----l~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~------~~~~~~f~~ 344 (418)
T PLN02242 275 H----LSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDT------EERANRLMR 344 (418)
T ss_pred c----HHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECC------HHHHHHHHH
Confidence 2 344567888999999999999877665332 22345555532 123556666
Q ss_pred HHHHcC----cEEEeCCCCCCC---------------------CCCCEEEEEeecCCHH-HHHHHHHHHHHHHHHHH
Q 046900 388 SMLHEV----KLNISPGSSCHC---------------------SEPGWFRVCFANMSEQ-TLEVALKRIHNFMQKRE 438 (442)
Q Consensus 388 ~l~~~~----gi~v~pg~~f~~---------------------~~~~~iRls~~~~~~e-~i~~~l~~l~~~l~~~~ 438 (442)
.+ +-- .+.+..|..-.. -.++.+|||++- | +.+.+++.|.+++...+
T Consensus 345 ~l-~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---E~~~~dli~dl~~al~~~~ 417 (418)
T PLN02242 345 YL-QNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY---TGTLEQRWSQFEKALSAMK 417 (418)
T ss_pred Hh-hcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecC---CCCHHHHHHHHHHHHHHhh
Confidence 55 211 122333322110 123689999996 4 36777888888877643
No 150
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.95 E-value=1e-25 Score=218.50 Aligned_cols=298 Identities=17% Similarity=0.202 Sum_probs=214.4
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC------------C--CCeEEEcCCCCc
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD------------P--GDALLVPTPYYP 155 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~------------~--gd~Vl~~~p~y~ 155 (442)
.|....+..++++++++++.+.+|. +.+.+++++|+|+++++..++.++.. + ++.|+++.++|.
T Consensus 29 ~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~ 106 (345)
T cd06450 29 TWDESPAATEMEAEVVNWLAKLFGL--PSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHV 106 (345)
T ss_pred ccccCchhHHHHHHHHHHHHHHhCC--CCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchh
Confidence 4777778899999999999998772 22456899999999999999888743 2 347888999999
Q ss_pred ChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcE
Q 046900 156 GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIH 235 (442)
Q Consensus 156 ~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~ 235 (442)
.+...+.. .|++++.++++++ +.+|++.|++.+.+...++.+++++++++|+||||.+.+ +++|+++|+++|++
T Consensus 107 ~~~~~~~~-~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~ 180 (345)
T cd06450 107 SVEKAAAY-LDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP---LEEIADLAEKYDLW 180 (345)
T ss_pred HHHHHHHH-HhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---HHHHHHHHHHhCCe
Confidence 99888885 7999999998764 379999999999875545557788899999999999866 78888999999999
Q ss_pred EEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHH
Q 046900 236 LVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQ 315 (442)
Q Consensus 236 vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q 315 (442)
+++|++|+.+.+........ ... ..+-..+..|++|.++ ++.++|+++.+ .+.+
T Consensus 181 l~vD~a~~~~~~~~~~~~~~---~~~----~~~~d~~~~s~~K~l~-~p~g~g~~~~~------------------~~~~ 234 (345)
T cd06450 181 LHVDAAYGGFLLPFPEPRHL---DFG----IERVDSISVDPHKYGL-VPLGCSAVLVR------------------ALKL 234 (345)
T ss_pred EEEechhhHHHhhChhhHHH---hcC----ccccCEEEEchhHhhC-CCcchHHHHHH------------------HHHH
Confidence 99999998765432111111 110 0122245679999775 77889998773 3444
Q ss_pred HHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec-CCceEEEEEecCCcccccChhhHHHHHHHHHHcC
Q 046900 316 YLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK-GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEV 393 (442)
Q Consensus 316 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 393 (442)
.++..++... .+++.++++.+.++++.+.|.+. ++++.. ++++++.| .++.... ...+..++.+.|.++
T Consensus 235 ~~~l~~l~~~-----g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f-~~~~~~~--~~~~~~~i~~~L~~~- 305 (345)
T cd06450 235 WATLRRFGRD-----GYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCF-RLKPSVK--LDELNYDLSDRLNER- 305 (345)
T ss_pred HHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEE-EECCcch--hhHHHHHHHHHHHhc-
Confidence 4445555432 24566677778888999999876 676654 56665554 4443100 001356788888666
Q ss_pred cEEEeCCCCCCCCCCCEEEEEeec-C-CHHHHHHHHHHHHH
Q 046900 394 KLNISPGSSCHCSEPGWFRVCFAN-M-SEQTLEVALKRIHN 432 (442)
Q Consensus 394 gi~v~pg~~f~~~~~~~iRls~~~-~-~~e~i~~~l~~l~~ 432 (442)
|+.+.++..+. .++++|+++.. . ++++++++++.|++
T Consensus 306 g~~~~~~~~~~--~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 306 GGWHVPATTLG--GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred CCEEEEeeEEC--CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 66655554443 45789999974 2 78999999999875
No 151
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.95 E-value=3.6e-25 Score=217.40 Aligned_cols=308 Identities=14% Similarity=0.153 Sum_probs=208.4
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
....++|+.+|++++ .+++++++|+++++..++.+++++||.|+++.++|......++. .|++++.++.
T Consensus 63 ~~~~~l~~~lA~~~g----------~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~-~G~~~~~v~~ 131 (387)
T PRK09331 63 PPIADFHEDLAEFLG----------MDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAER-AGLNVREVPK 131 (387)
T ss_pred hHHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHH-cCCEEEEEeC
Confidence 357899999999975 34688999999999999999999999999999998887777774 8999999998
Q ss_pred CCCCCCcCCHHHHHHHHHHHH-hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 175 DSSNNFQITPQALEAAYKEAE-SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~-~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
+.+.++.+|++.+++.+++.. ..++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+. +....
T Consensus 132 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~----g~~~~ 204 (387)
T PRK09331 132 TGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTV----GRMPV 204 (387)
T ss_pred ccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCccc----CCcCC
Confidence 433356799999999997531 11246889999999999999877 88888999999999999999984 21122
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccC-------CCcHHHHHHHHHHhcCch
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT-------LISSQTQYLLASMLSNKK 326 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~-------~~s~~~q~~~~~~l~~~~ 326 (442)
+.... +..+++.|++|+++ .+.|+||++++ +.+.+.+.+....+ ..++..+..+..++...+
T Consensus 205 ~~~~~---------g~D~~~~s~~K~l~-~~~~~G~l~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~ 273 (387)
T PRK09331 205 DGKKL---------GADFIVGSGHKSMA-ASAPSGVLATT-EEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFP 273 (387)
T ss_pred CHHHc---------CCCEEEeeCccccc-CCCCEEEEEEC-HHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHH
Confidence 33222 33477899999997 56699999995 45444443321110 001111111121222112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec--CCceEEEEEecCCccc--ccChhhHHHHHHHHHHcCcEEEeCCC
Q 046900 327 FTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK--GNAGLFCWMNLSPLLE--EQTREGELALWDSMLHEVKLNISPGS 401 (442)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~g~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~gi~v~pg~ 401 (442)
...+.++ ..++..++.+++.+.|++. |+++.. +....++.++.+.... ........++.+.|.++ ||...+.
T Consensus 274 ~~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~~~~~- 350 (387)
T PRK09331 274 HVVERVK-RWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKR-GIHGIKP- 350 (387)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHc-CceEEcc-
Confidence 2233332 2344456677888999998 888873 2223355566552110 00011245688888665 9984331
Q ss_pred CCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 402 SCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 402 ~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
.....+|+.....++++++++++.|+++++++.
T Consensus 351 ----~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~~ 383 (387)
T PRK09331 351 ----GATKEFKLSTYGLTWEQVEYVADAFKEIAEKYG 383 (387)
T ss_pred ----CCceEEEEEeccCCHHHHHHHHHHHHHHHHhcC
Confidence 123457776633489999999999999887653
No 152
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.95 E-value=2.6e-25 Score=218.61 Aligned_cols=305 Identities=13% Similarity=0.188 Sum_probs=214.4
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCcc-CCCcEEEecChHHHHHHHHHhhc-----CC-CCeEEEcCCCCcChHHh--
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKF-DLNRIVVTAGATAANELLTFILA-----DP-GDALLVPTPYYPGFDRD-- 160 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~~~i~~t~G~~~ai~~~~~~l~-----~~-gd~Vl~~~p~y~~~~~~-- 160 (442)
.|+. .+...+++++++++.. +.. ++++|++|+|+++++..+++++. ++ ++.|+++.+.|+.+...
T Consensus 35 ~~~~-~~~~~l~~a~~~~~~~-----~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~ 108 (382)
T TIGR03403 35 QFGT-ATHPAIAEALDKLYKG-----INARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCA 108 (382)
T ss_pred HHHH-HHHHHHHHHHHHHHHH-----cCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHH
Confidence 4543 4678899999988863 223 67899999999999999988762 45 47899998777766544
Q ss_pred -HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEe
Q 046900 161 -LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSD 239 (442)
Q Consensus 161 -~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~D 239 (442)
++ ..|++++.+|++++ +.+|++.+++.+.+ +++++++++|+||||.+++ +++|.++|+++|+++++|
T Consensus 109 ~~~-~~G~~v~~v~~~~~--g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~~ivD 176 (382)
T TIGR03403 109 FLE-SLGVEVTYLPINEQ--GTITAEQVREAITE------KTALVSVMWANNETGMIFP---IKEIGEICKERGVLFHTD 176 (382)
T ss_pred HHH-HCCCEEEEEecCCC--CCCCHHHHHHhccc------CCeEEEEEcccCCCccccC---HHHHHHHHHHcCCEEEEe
Confidence 34 37999999998753 46899999998865 6789999999999999999 567888888999999999
Q ss_pred ccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHH-HHHHH---H--HccccCCCcHH
Q 046900 240 EIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDK-VVTTA---R--RMSSFTLISSQ 313 (442)
Q Consensus 240 e~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~-~~~~~---~--~~~~~~~~s~~ 313 (442)
++++. +.. ...+... +.-+++.|++|.+|.+| +|+++..+.. +...+ . .....++.+.+
T Consensus 177 ~a~~~---g~~-~~~~~~~---------~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~ 241 (382)
T TIGR03403 177 AVQAI---GKI-PVDVQKA---------GVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVP 241 (382)
T ss_pred chhhc---CCC-ccCcccc---------CCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCcccCCcChH
Confidence 99873 111 1222211 22267889999988778 4877664321 10111 0 01123556677
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC---ceEEEEEecCCcccccChhhHHHHHHHH
Q 046900 314 TQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGN---AGLFCWMNLSPLLEEQTREGELALWDSM 389 (442)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~l~~~l 389 (442)
.+.++...++ +..++++...+++++.++++.+.|.+. |+++..+. .+.++.+.++.. +..++...|
T Consensus 242 ~~~al~~al~---~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~L 311 (382)
T TIGR03403 242 YIVAMGEAMR---LANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGV-------EGEAMLWDL 311 (382)
T ss_pred HHHHHHHHHH---HHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCC-------CHHHHHHhh
Confidence 7766666664 234456677788999999999999875 77777543 123445555431 245666666
Q ss_pred HHcCcEEEeCCCCCCCC-----------------CCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 390 LHEVKLNISPGSSCHCS-----------------EPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 390 ~~~~gi~v~pg~~f~~~-----------------~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
. ++||.++.|+.|... ..+.+|+|+. ..++++++++++.|++++++.+
T Consensus 312 ~-~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 312 N-KAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred c-cCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4 459999987765310 1257999997 2289999999999999887754
No 153
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.95 E-value=1.2e-25 Score=220.34 Aligned_cols=290 Identities=19% Similarity=0.252 Sum_probs=202.4
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccC-CCcEEEecChHHHHHHHHHhhcC---CCCeEEEcCCCCcChH----HhHhhhcC
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFD-LNRIVVTAGATAANELLTFILAD---PGDALLVPTPYYPGFD----RDLRWRTG 166 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~-~~~i~~t~G~~~ai~~~~~~l~~---~gd~Vl~~~p~y~~~~----~~~~~~~G 166 (442)
....++|+.++++++ ++ +++|++|+|+++++.+++.++.. +||+|++++++|+... ..++ ..|
T Consensus 43 ~~~~~~~~~la~~~~--------~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~-~~g 113 (373)
T cd06453 43 DAYEAAREKVARFIN--------APSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAE-RTG 113 (373)
T ss_pred HHHHHHHHHHHHHhC--------CCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHh-hcC
Confidence 345678888888875 34 67999999999999999999987 8999999999998743 3344 379
Q ss_pred cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 167 ~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
++++.++.+. ++.+|++++++.+.+ ++++|++++|+||||.+.+ +++|+++|++++++|++|++|+...
T Consensus 114 ~~~~~v~~~~--~~~~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~ 182 (373)
T cd06453 114 AKLKVVPVDD--DGQLDLEALEKLLTE------RTKLVAVTHVSNVLGTINP---VKEIGEIAHEAGVPVLVDGAQSAGH 182 (373)
T ss_pred cEEEEeecCC--CCCcCHHHHHHHhcC------CceEEEEeCcccccCCcCC---HHHHHHHHHHcCCEEEEEhhhhcCc
Confidence 9999999874 456899999999865 7889999999999999998 6678888889999999999987422
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc--------------------
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS-------------------- 306 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~-------------------- 306 (442)
. ..++... +..+++.|++|.++. .++||++++ +.+.+.+.....
T Consensus 183 ~----~~~~~~~---------~~d~~~~s~~K~~~~--~g~g~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 246 (373)
T cd06453 183 M----PVDVQDL---------GCDFLAFSGHKMLGP--TGIGVLYGK-EELLEEMPPYGGGGEMIEEVSFEETTYADLPH 246 (373)
T ss_pred e----eeecccc---------CCCEEEeccccccCC--CCcEEEEEc-hHHhhcCCCeecCCCccccccccccccCCCcc
Confidence 1 1111111 223566789999974 568999985 444444332210
Q ss_pred -c--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC--ceEEEEEecCCcccccChh
Q 046900 307 -F--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGN--AGLFCWMNLSPLLEEQTRE 380 (442)
Q Consensus 307 -~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~--~g~~~~~~~~~~~~~~~~~ 380 (442)
+ +..+.....++.+.++... +..+++++++.++.++++.+.|.+. ++++..+. .+.++++.++..
T Consensus 247 ~~~~~t~~~~~~~al~~al~~l~--~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------- 317 (373)
T cd06453 247 KFEAGTPNIAGAIGLGAAIDYLE--KIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGI------- 317 (373)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCc-------
Confidence 0 1122223333333332110 1124566677778888999999887 67766321 234666676542
Q ss_pred hHHHHHHHHHHcCcEEEeCCCCCCC------CCCCEEEEEeec-CCHHHHHHHHHHH
Q 046900 381 GELALWDSMLHEVKLNISPGSSCHC------SEPGWFRVCFAN-MSEQTLEVALKRI 430 (442)
Q Consensus 381 ~~~~l~~~l~~~~gi~v~pg~~f~~------~~~~~iRls~~~-~~~e~i~~~l~~l 430 (442)
+..++.+.|.++ ||.+.+|..+.. ..++++|+|++. .++++++++++.|
T Consensus 318 ~~~~i~~~l~~~-gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 318 HPHDVATILDQY-GIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CHHHHHHHHHHC-CEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 256777877665 999988875421 125789999982 2889999998764
No 154
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.95 E-value=3.4e-25 Score=220.24 Aligned_cols=346 Identities=15% Similarity=0.135 Sum_probs=218.9
Q ss_pred CCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 45 TNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 45 ~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
.....+|||..+ .+.++ ++.+.+.+.+.... ...|+...+..++...+++.+.+.++ .+.
T Consensus 33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~------------~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~ 96 (413)
T cd00610 33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAK------------LTHFSLGFFYNEPAVELAELLLALTP----EGL 96 (413)
T ss_pred CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHh------------CcCccCcccCCHHHHHHHHHHHHhCC----CCC
Confidence 345678999876 33343 34444444433211 12344333445666666666666544 357
Q ss_pred CcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcC------------cEEEEEecCCC----CCCcC
Q 046900 121 NRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTG------------IKIVPIHCDSS----NNFQI 182 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G------------~~v~~v~~~~~----~~~~~ 182 (442)
++|++++|+++++..+++.+. .+++.|++.+++|.+.........+ .+++.+|.+.. ..+..
T Consensus 97 ~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (413)
T cd00610 97 DKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELAD 176 (413)
T ss_pred CEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHH
Confidence 899999999999999998773 5789999999999886544331122 23566665421 12445
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHh
Q 046900 183 TPQALEAAYKEAESKDMRVRGVLITNP-SNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILE 260 (442)
Q Consensus 183 d~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~ 260 (442)
|++.|++.++++ ..+++ +++++| +|++|.++ +.+.+++|.++|++|++++|+||+|..+...+..+ . ....
T Consensus 177 d~~~l~~~l~~~---~~~~~-~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-~-~~~~- 249 (413)
T cd00610 177 DLEALEEALEEH---PEEVA-AVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF-A-FEHF- 249 (413)
T ss_pred HHHHHHHHHhcC---CCCEE-EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-h-Hhhc-
Confidence 888999888642 12444 455556 56779877 66779999999999999999999999754333211 1 1111
Q ss_pred hhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHH--HHcc--ccCCCcHHHHHHHHHHhcCchhHHHHHHHHH
Q 046900 261 ARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTA--RRMS--SFTLISSQTQYLLASMLSNKKFTENYIKTNR 336 (442)
Q Consensus 261 ~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~--~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 336 (442)
+...-+.|+||.++ .|+|+||+++ ++.+.+.+ .... ..+..+++.+.++.+.++.. ++ ....
T Consensus 250 -------~~~~d~~t~sK~l~-~g~~~g~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l---~~--~~~~ 315 (413)
T cd00610 250 -------GVEPDIVTLGKGLG-GGLPLGAVLG-REEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVL---EE--EGLL 315 (413)
T ss_pred -------CCCCCeEEEccccc-CccccEEEEE-cHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHH---Hh--ccHH
Confidence 11112458999998 6899999998 56666664 2222 22456777777776666421 11 2334
Q ss_pred HHHHHHHHHHHHHHHhC----CCeeecCCceEEEEEecCCcccc--cChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCE
Q 046900 337 ERLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEE--QTREGELALWDSMLHEVKLNISPGSSCHCSEPGW 410 (442)
Q Consensus 337 ~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~ 410 (442)
++++++.+++.+.|++. ++.......|.++|+.++..... ........+++.|+++ ||.+.|+. ..+
T Consensus 316 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gv~v~~~~------~~~ 388 (413)
T cd00610 316 ENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALER-GLLLRPSG------GNV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHC-CeEEeecC------CCE
Confidence 55555566666666543 22222234567888887642100 0012356788888777 99999974 467
Q ss_pred EEEEeec-CCHHHHHHHHHHHHHHH
Q 046900 411 FRVCFAN-MSEQTLEVALKRIHNFM 434 (442)
Q Consensus 411 iRls~~~-~~~e~i~~~l~~l~~~l 434 (442)
+|++++. .+++++++++++|.+++
T Consensus 389 lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 389 IRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHhC
Confidence 9998763 38899999999998763
No 155
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=5.7e-25 Score=217.54 Aligned_cols=326 Identities=15% Similarity=0.143 Sum_probs=218.0
Q ss_pred ceeeeecccccccHH-HHHHHHHhCCCCcccCCCCCCCCcccccCC-----CcchHHHHHHHHHHHHHHhCCCCccCCCc
Q 046900 49 GVIQMGLAENQVSFD-LLEEYLEQQPEASTWGKGAPGFRENALFQD-----YHGLKSFRQAMASFMEQIRGGRAKFDLNR 122 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~l~~~~~~~~~~~~~~ 122 (442)
+++++++++..++++ .+.....+. . ....|.+ ..|.+++++++++++.+.+| ++.++
T Consensus 21 ~~~~l~~g~~~~~~p~~~~~~~~~~-~------------~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g----~~~~~ 83 (398)
T cd00613 21 SMSFLGSGTYKHNPPAVIKRNILEN-E------------FYTAYTPYQPEISQGRLQALFELQTMLCELTG----MDVAN 83 (398)
T ss_pred CcccccccccCCcCcHHHHHHhccc-c------------CcccCCCCChhhhhhHHHHHHHHHHHHHHHHC----CCccc
Confidence 558889888777654 344333332 1 0123544 67999999999999999876 45557
Q ss_pred EEEecC-hHHHHHHHHHhhcCC--CCeEEEcCCCCcChHHhHhhhcC----cEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 123 IVVTAG-ATAANELLTFILADP--GDALLVPTPYYPGFDRDLRWRTG----IKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 123 i~~t~G-~~~ai~~~~~~l~~~--gd~Vl~~~p~y~~~~~~~~~~~G----~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
++++++ ++++...+..++..+ ||.|++++|.|+.+...+.. .| ++++.++.++ ++.+|++.+++.+.+
T Consensus 84 v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~-~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~-- 158 (398)
T cd00613 84 ASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVART-RGEPLGIEVVEVPSDE--GGTVDLEALKEEVSE-- 158 (398)
T ss_pred eeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHH-hcccCCcEEEEeccCC--CCCcCHHHHHHhcCC--
Confidence 777775 445555555566666 99999999999999888774 66 8999998764 346899999998854
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEec
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYS 275 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S 275 (442)
++++|++++|+ |||.+. +.+++|.++|+++|+++|+|+++..... ...... .+..+++.|
T Consensus 159 ----~t~~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~----~~~~~~---------~~~d~~~~s 218 (398)
T cd00613 159 ----EVAALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTG----LKPPGE---------YGADIVVGN 218 (398)
T ss_pred ----CeEEEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccC----CCChHH---------cCCCEEEee
Confidence 78999999885 899984 4469999999999999999998763221 111111 134578899
Q ss_pred CcccCCCC----CceeEEEeecCHHHHHHHHHc-----------------------------cc--cCCCc-HHHHHHHH
Q 046900 276 LSKDLGLP----GFRVGTIYSYNDKVVTTARRM-----------------------------SS--FTLIS-SQTQYLLA 319 (442)
Q Consensus 276 ~SK~~g~~----G~RiG~i~~~~~~~~~~~~~~-----------------------------~~--~~~~s-~~~q~~~~ 319 (442)
+||.+ +| |+|+||++.+ +.+.+.+... .+ ....+ ...|.+..
T Consensus 219 ~~K~~-~p~g~Ggp~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~ 296 (398)
T cd00613 219 LQKTG-VPHGGGGPGAGFFAVK-KELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAM 296 (398)
T ss_pred ccccC-CCCCCCCCceeEEEEh-hhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHH
Confidence 99998 56 7999999985 4444432100 00 01111 22333333
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEE--EEEecCCcccccChhhHHHHHHHHHHcCcEEE
Q 046900 320 SMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLF--CWMNLSPLLEEQTREGELALWDSMLHEVKLNI 397 (442)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v 397 (442)
.+.... ...+++.+++++++++++.+.|++.+... .+.+.++ ++++++.... .++.++++.|+++ ||.+
T Consensus 297 ~l~~~~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~v~~~~~~~~~----~~~~~~~~~L~~~-gi~~ 367 (398)
T cd00613 297 YIVYLG---PEGLKEIAERAHLNANYLAKRLKEVGGVL-PFNGPFFHEFVLRLPPLYG----IRAEDLAKALIDG-GFHA 367 (398)
T ss_pred HHHHhC---HHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCeeEEEEEEcCCcch----HHHHHHHHhhhhc-Cccc
Confidence 222211 23456778889999999999998875443 2333333 5666654100 1367888888776 9876
Q ss_pred eCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHH
Q 046900 398 SPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRI 430 (442)
Q Consensus 398 ~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l 430 (442)
.... ....+.+|+++. ..++++++++++.|
T Consensus 368 ~~~~---~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 368 PTMY---LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred cccc---cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 4321 123578999986 33899999998764
No 156
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.94 E-value=2e-24 Score=212.95 Aligned_cols=309 Identities=14% Similarity=0.115 Sum_probs=223.9
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCC-CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcCh--HHhHhhhcCcEEEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDL-NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGF--DRDLRWRTGIKIVP 171 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~~G~~v~~ 171 (442)
.+..++++.+.+.+.+.++ +++ +.+++++++++++..++..++++||+|+++++.|+.. ...++ ..|++++.
T Consensus 38 ~~~~~~~~~~~~~l~~~~g----~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~-~~g~~v~~ 112 (401)
T PLN02409 38 PAFPALTKELLEDVKYIFK----TKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQ-RLNFDVDV 112 (401)
T ss_pred HHHHHHHHHHHHHHHHHhC----CCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHH-HcCCceEE
Confidence 3668888888888888776 444 4688899999999999999999999999999988665 35566 48999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++.+.+. .+|++.+++.+++.. .++++++++++++||||.+++.+++.++++ |+++|+++|+|++++. +. .
T Consensus 113 v~~~~~~--~~~~~~l~~~l~~~~--~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g~~~vvD~v~s~---g~-~ 183 (401)
T PLN02409 113 VESPWGQ--GADLDILKSKLRQDT--NHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHPALLLVDGVSSI---GA-L 183 (401)
T ss_pred EECCCCC--CCCHHHHHHHHhhCc--CCCccEEEEEeecccccccCCHHHHHHHHh-hhccCcEEEEEccccc---CC-c
Confidence 9987533 378999999987410 026889999999999999999777766666 9999999999999873 22 1
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc------------------c--cCCCc
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS------------------S--FTLIS 311 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~------------------~--~~~~s 311 (442)
...+..+ +..+++.|.+|.++.| .++||++++ +.+.+.+.... . .++.+
T Consensus 184 ~id~~~~---------~~D~~~~s~~K~l~~P-~G~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~ 252 (401)
T PLN02409 184 DFRMDEW---------GVDVALTGSQKALSLP-TGLGIVCAS-PKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPS 252 (401)
T ss_pred ccccccc---------CccEEEEcCccccCcC-CCcceeEEC-HHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCcc
Confidence 1122212 2236677889998643 379999985 44444433211 0 11233
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC----ceEEEEEecCCcccccChhhHHHHHH
Q 046900 312 SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN----AGLFCWMNLSPLLEEQTREGELALWD 387 (442)
Q Consensus 312 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~l~~ 387 (442)
...+.++.+.++.. .+..++..++++++.++++.+.|++.|+++..+. .+..+|+.+|...+ ..++..
T Consensus 253 ~~~~~al~~al~~~--~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~------~~~l~~ 324 (401)
T PLN02409 253 IQLLYGLRAALDLI--FEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGID------SAEIVK 324 (401)
T ss_pred HHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCC------HHHHHH
Confidence 34455555555421 1334677788899999999999988888876542 33456777775432 567888
Q ss_pred HHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 388 SMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 388 ~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
.+++++||.+.+|.. ....+.|||+.. ..+.+++..+++.|++++.+..
T Consensus 325 ~l~~~~~i~i~~G~~--~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 325 NAWKKYNLSLGLGLN--KVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred HHHHhCCEEEEcCCC--cccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 888888999998864 223578999975 4489999999999999998765
No 157
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.94 E-value=3.1e-24 Score=212.40 Aligned_cols=298 Identities=15% Similarity=0.126 Sum_probs=205.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
..+|++.+|++++ .+..++++++++++..++.++.. +||.|++....|......++. .|.++..++.
T Consensus 92 ~~~le~~la~~~g----------~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~-~g~~~~~~~~ 160 (406)
T PRK13393 92 HVLLEAELADLHG----------KEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRH-SRAEKRIFRH 160 (406)
T ss_pred HHHHHHHHHHHhC----------CCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHH-cCCeEEEeCC
Confidence 4667777777653 24555555556788888887765 788888777788877777774 7888777663
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s 254 (442)
.|++.+++.++... ..++++|++++++||+|.+.+ +++|.++|+++++++|+||+|+...++.. ...
T Consensus 161 -------~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~-G~g 227 (406)
T PRK13393 161 -------NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPR-GGG 227 (406)
T ss_pred -------CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCC-CCc
Confidence 36788888776421 125678899999999999999 77888889999999999999985444322 112
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc----CCCcHHHHHHHHHHhcCchhHHH
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF----TLISSQTQYLLASMLSNKKFTEN 330 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~~~~~~~ 330 (442)
+..... . ..+..++++||||++|++| ||+++ ++.+.+.++..... ...++..+.++.+.++.. ++
T Consensus 228 ~~~~~~---~-~~~~~i~~~tlsKa~g~~G---G~~~~-~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~---~~ 296 (406)
T PRK13393 228 IAEREG---L-ADRLTIIEGTLAKAFGVMG---GYITG-SAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHL---KA 296 (406)
T ss_pred hhhhcC---C-CCCCeEEEEeCchhhcccC---ceeeC-CHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHH---hh
Confidence 221111 0 1234677899999999888 99987 56666666654322 234555666666666532 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC-CCCC
Q 046900 331 YIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC-SEPG 409 (442)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~-~~~~ 409 (442)
. ...++++.++++++.+.|++.|+++.++.+++ +.+.+... ..+.++++.|++++||.+.++..... .+..
T Consensus 297 ~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~i-~~v~~~~~------~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~ 368 (406)
T PRK13393 297 S-SAERERHQDRVARLRARLDKAGIPHLPNPSHI-VPVMVGDP------VLCKQISDELLDRYGIYVQPINYPTVPRGTE 368 (406)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCCCe-EEEEeCCH------HHHHHHHHHHHHhCCEEEEeECCCCCCCCCc
Confidence 2 12345677888999999988888777666664 44444321 13577888888766999998654322 2346
Q ss_pred EEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 410 WFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 410 ~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
++||++. ..+++++++++++|.+++.+.
T Consensus 369 ~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 369 RLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 8999987 338999999999999987653
No 158
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.94 E-value=2.2e-24 Score=214.32 Aligned_cols=345 Identities=14% Similarity=0.124 Sum_probs=212.9
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCccccc-CCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALF-QDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.+.|+|..++|++++.. .+.+...... .+..| .....| ....-...+.+...+.+.+.+| ++..+|+++
T Consensus 25 ~~~~~l~~~~n~~~~~v-~~a~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~e~~~~~~la~~~g----~~~~~i~~~ 94 (416)
T PRK00011 25 EEHIELIASENFVSPAV-MEAQGSVLTN-KYAEG----YPGKRYYGGCEYVDVVEQLAIDRAKELFG----AEYANVQPH 94 (416)
T ss_pred hcCeeeecccCcCCHHH-HHHHhchhhc-ccccC----CCCccccccchHHHHHHHHHHHHHHHHhC----CCceeeecC
Confidence 45689999999965544 3333222100 00000 001112 1111122333322334444444 455667666
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh-----HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRD-----LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
+| ++++..++.+++++||+|+++.|+|..+... +. ..|++++.++++.+ ++.+|++++++.+++. ++
T Consensus 95 sg-t~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~-----~~ 166 (416)
T PRK00011 95 SG-SQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFS-GKLYNVVSYGVDEE-TGLIDYDEVEKLALEH-----KP 166 (416)
T ss_pred Cc-hHHHHHHHHHhcCCCCEEEEeccccCCccccccccccc-cceeeEeecCcCcc-cCCcCHHHHHHHHHhc-----CC
Confidence 65 6789999999999999999999999865321 12 24678888887642 4679999999998742 67
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC-CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS-AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDL 280 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~-~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~ 280 (442)
+++++++++|| ...+ +++|+++|+++|+++|+|++|... .+.+.....+. ...++++|+||++
T Consensus 167 k~v~~~~~~~~--~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-----------~~di~~~S~~K~l 230 (416)
T PRK00011 167 KLIIAGASAYS--RPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-----------HADVVTTTTHKTL 230 (416)
T ss_pred CEEEECCCcCC--CccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-----------CCcEEEecCCcCC
Confidence 88888766655 3444 788899999999999999998632 21111111111 1126789999976
Q ss_pred CCCCceeEEEeecCHHHHHHHHHccccCCCc---HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCee
Q 046900 281 GLPGFRVGTIYSYNDKVVTTARRMSSFTLIS---SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIEC 357 (442)
Q Consensus 281 g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s---~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 357 (442)
+|.|.||++++++.+.+.++.....+..+ ...+.++...+. ....+++++..++++++++++.+.|++.|+++
T Consensus 231 --~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~--~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 306 (416)
T PRK00011 231 --RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFK--EALEPEFKEYAQQVVKNAKALAEALAERGFRV 306 (416)
T ss_pred --CCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 78999999996667777776544432222 112222111111 12233457778889999999999999888877
Q ss_pred ec-CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCC-CC---CCCCCEEEEEee-----cCCHHHHHHHH
Q 046900 358 LK-GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSS-CH---CSEPGWFRVCFA-----NMSEQTLEVAL 427 (442)
Q Consensus 358 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~-f~---~~~~~~iRls~~-----~~~~e~i~~~l 427 (442)
.. ...++++|+.+++... +..++.+.|. ++||.+..+.. +. +..+..+|++.. .++++++++++
T Consensus 307 ~~~~~~~~~~~i~~~~~~~-----~~~~~~~~L~-~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~ 380 (416)
T PRK00011 307 VSGGTDNHLVLVDLRSKGL-----TGKEAEAALE-EANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIA 380 (416)
T ss_pred eecCCCCeEEEEeCcccCC-----CHHHHHHHHH-HcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHH
Confidence 54 1224788998853210 2456666664 45999974321 11 112356999641 34789999999
Q ss_pred HHHHHHHHH
Q 046900 428 KRIHNFMQK 436 (442)
Q Consensus 428 ~~l~~~l~~ 436 (442)
+.|++++..
T Consensus 381 ~~l~~~~~~ 389 (416)
T PRK00011 381 ELIADVLDN 389 (416)
T ss_pred HHHHHHHhc
Confidence 999988664
No 159
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.94 E-value=7.7e-25 Score=215.05 Aligned_cols=296 Identities=14% Similarity=0.159 Sum_probs=204.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc---CCCCeEEEcCCCCcChHHhHhh--hcCcEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA---DPGDALLVPTPYYPGFDRDLRW--RTGIKIVP 171 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~---~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~ 171 (442)
+.++|+.++++++ +++++|++|+|+++++..++.++. .+||.|++....|+.+...+.. ..|++++.
T Consensus 44 ~~~~r~~la~~~g--------~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~ 115 (379)
T TIGR03402 44 VEEAREQVAKLLG--------AEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTY 115 (379)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEE
Confidence 4566667777664 568899999999999999888763 4568999999888776543221 26999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
+|++++ +.+|++.+++.+++ +++++++++++||||.+++ +++|.++|+++|+++++|++++. +..
T Consensus 116 v~~~~~--g~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~~~~~----g~~ 180 (379)
T TIGR03402 116 LPVDEE--GRLDLEELRAAITD------DTALVSVMWANNETGTIFP---IEEIGEIAKERGALFHTDAVQAV----GKI 180 (379)
T ss_pred EccCCC--CcCCHHHHHHhcCC------CcEEEEEEcccCCeeeccc---HHHHHHHHHHcCCEEEEECcccc----ccc
Confidence 998653 46899999998864 7889999999999999999 56788889999999999999973 222
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHH-HH-----HHccccCCCcHHHHHHHHHHhcCc
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVT-TA-----RRMSSFTLISSQTQYLLASMLSNK 325 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~-~~-----~~~~~~~~~s~~~q~~~~~~l~~~ 325 (442)
...+... +--+++.|.+|.+|.+| +|+++..+..... .+ ......+..+.+...++.+.++
T Consensus 181 ~~~~~~~---------~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~-- 247 (379)
T TIGR03402 181 PIDLKEM---------NIDMLSLSGHKLHGPKG--VGALYIRKGTRFRPLLRGGHQERGRRAGTENVPGIVGLGKAAE-- 247 (379)
T ss_pred ccCcccC---------CCCEEEEcHHHcCCCCc--eEEEEECCCCCCCCcccCCccCCCcCCCCccHHHHHHHHHHHH--
Confidence 2222222 22366778889777556 7888774332100 00 0001123334444444444443
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeeecCC-----ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEe
Q 046900 326 KFTENYIKTNRERLQKRYQMIIEGLRS-A-GIECLKGN-----AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNIS 398 (442)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~ 398 (442)
+..++++...++.++.++++.+.|.+ . ++++..+. +.+.+|+.... ..++...| +++||.+.
T Consensus 248 -~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l-~~~gI~v~ 316 (379)
T TIGR03402 248 -LATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIE---------GEAILLLL-DMEGICAS 316 (379)
T ss_pred -HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC---------HHHHHHhh-ccCCEEEE
Confidence 33445667778888888999998875 4 66665432 33455554322 45677766 45599999
Q ss_pred CCCCCCCC-----------------CCCEEEEEeec-CCHHHHHHHHHHHHHHHHHHHh
Q 046900 399 PGSSCHCS-----------------EPGWFRVCFAN-MSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 399 pg~~f~~~-----------------~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+|..|... ..+.+|+|++. -+++|++++++.|+++++++++
T Consensus 317 ~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 317 SGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred chhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99877532 13689999973 2899999999999999887654
No 160
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.94 E-value=8.1e-24 Score=207.49 Aligned_cols=298 Identities=13% Similarity=0.149 Sum_probs=199.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc------CCCCeEEEcCCCCcChHHhHhhhcCcEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA------DPGDALLVPTPYYPGFDRDLRWRTGIKI 169 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~------~~gd~Vl~~~p~y~~~~~~~~~~~G~~v 169 (442)
|..++.+.+.+.+.+.+| ++++++++++|+++++..++.++. ++||.|++++++|..+...++. .|+++
T Consensus 56 ~~~~~~~~~~~~la~~~g----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~-~G~~~ 130 (373)
T TIGR03812 56 GTKKIEEEVVGSLGNLLH----LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEM-LGLEL 130 (373)
T ss_pred cHHHHHHHHHHHHHHHhC----CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHH-cCCeE
Confidence 334444444444444433 567789999999999988776654 4679999999999999888885 89999
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
+.++.++ ++.+|++++++.+.+ ++..++++.|+||||.+.+ +++|.++|+++++++|+|++|+.+...-
T Consensus 131 ~~v~~~~--~~~~d~~~l~~~l~~------~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~ 199 (373)
T TIGR03812 131 RYAPLDE--DYTVDVKDVEDLIDD------NTIGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPF 199 (373)
T ss_pred EEEeeCC--CCCcCHHHHHHHHhh------CcEEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHH
Confidence 9999864 467899999999875 4555566668999999987 7777888889999999999998543110
Q ss_pred CCc-ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccC----------CCcHHHHHHH
Q 046900 250 SEF-VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT----------LISSQTQYLL 318 (442)
Q Consensus 250 ~~~-~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~----------~~s~~~q~~~ 318 (442)
... .....++-. ...--.+..|.+| |++++.|+|+++..++.+.+.++....+. ..+.....++
T Consensus 200 ~~~~~~~~~~d~~----~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~ 274 (373)
T TIGR03812 200 LKKGYNPPPFDFS----LPGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAAT 274 (373)
T ss_pred HhcCCCCCCcccc----CCCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHH
Confidence 000 000000000 0011123457789 66688889877654555555543222211 1122334444
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCe-eecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEE
Q 046900 319 ASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIE-CLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNI 397 (442)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v 397 (442)
...++.. .+..+++..+++.+.++++.+.|++.|+. +..+..+ ++.+.++. ..++.+.|.++ ||.+
T Consensus 275 ~~~l~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~v~~~~~~---------~~~v~~~L~~~-gi~v 341 (373)
T TIGR03812 275 YAVIKYL--GREGYRKIVAECMENTRYLVEELKKIGFEPVIEPVLN-IVAFEVDD---------PEEVRKKLRDR-GWYV 341 (373)
T ss_pred HHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCCce-EEEEEeCC---------HHHHHHHHHHC-Ccee
Confidence 4444421 13445677888999999999999988765 3444444 56566653 34678888766 9999
Q ss_pred eCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHH
Q 046900 398 SPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHN 432 (442)
Q Consensus 398 ~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~ 432 (442)
.++. .++++|+++.. .++++++++++.|++
T Consensus 342 ~~~~-----~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 342 SVTR-----CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred ccCC-----CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 8652 25689999972 278999999999875
No 161
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.94 E-value=6.4e-25 Score=213.53 Aligned_cols=289 Identities=16% Similarity=0.237 Sum_probs=200.8
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH----HhHhh
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD----RDLRW 163 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~ 163 (442)
..+|+.+ -..+|++++|++.+ . +..++++|+++++..++ .++++||+|+++.|.|+... ..+.
T Consensus 46 y~r~~~p-t~~~le~~la~l~g--------~--~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~- 112 (366)
T PRK08247 46 YSRTGNP-TRGVLEQAIADLEG--------G--DQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWK- 112 (366)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC--------C--CcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhh-
Confidence 3456554 46889999999875 2 23477888889999876 57789999999999998743 3344
Q ss_pred hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 164 RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 164 ~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
..|++++.++. .|++.+++++++ ++++|++++|+||+|. ..++++|+++|+++|+++|+|++|.
T Consensus 113 ~~G~~v~~vd~-------~d~~~l~~~i~~------~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~ 176 (366)
T PRK08247 113 KWNVRFVYVNT-------ASLKAIEQAITP------NTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFY 176 (366)
T ss_pred ccCceEEEECC-------CCHHHHHHhccc------CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCc
Confidence 38999988874 378999988865 7899999999999865 5669999999999999999999996
Q ss_pred cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC-CCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHH
Q 046900 244 GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL-PGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLAS 320 (442)
Q Consensus 244 ~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~-~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~ 320 (442)
...... ++ . .+..++++|+||.++- ++++.||++++++.+.+.+...... ..+++..|.++..
T Consensus 177 ~~~~~~----p~-~---------~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~ 242 (366)
T PRK08247 177 TPVLQR----PL-E---------EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIR 242 (366)
T ss_pred cccccC----ch-h---------cCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHh
Confidence 432211 11 1 1445889999999863 3579999998656666655433322 3456777777776
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-ecCCceEEEEEecCCcccccChhhHHHHHH---------H
Q 046900 321 MLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIE-C-LKGNAGLFCWMNLSPLLEEQTREGELALWD---------S 388 (442)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~---------~ 388 (442)
.++. +....++.+++++.+.+.|+++ ++. + .++.||+|.| ++... +....+.+ .
T Consensus 243 ~l~t-------l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~------~~~~~~~~~l~~~~~~~s 308 (366)
T PRK08247 243 GMKT-------LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDE------EWVNPFLKSLKLITFAES 308 (366)
T ss_pred ccCc-------HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCH------HHHHHHHHcCCcceEccC
Confidence 6652 2334445688999999999987 665 3 3447998887 55421 11222222 2
Q ss_pred HHHcCcEEEeCCCCCCCC-----------CCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 389 MLHEVKLNISPGSSCHCS-----------EPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 389 l~~~~gi~v~pg~~f~~~-----------~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
|.....+.+.|++.+... .++.+|||++- |+.+.+++.|.+++.+
T Consensus 309 lg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl---E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 309 LGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI---ENVEDLIADLKQAFKQ 364 (366)
T ss_pred CCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 222336777788665321 24679999996 4577777777777764
No 162
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.94 E-value=3.4e-24 Score=211.76 Aligned_cols=274 Identities=16% Similarity=0.208 Sum_probs=190.5
Q ss_pred CCcEEEecChHHHHHHHHHhhc--------CCCCeEEEcCCCCcChHH-hHhhhcC------------cEEEEEecCCCC
Q 046900 120 LNRIVVTAGATAANELLTFILA--------DPGDALLVPTPYYPGFDR-DLRWRTG------------IKIVPIHCDSSN 178 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~--------~~gd~Vl~~~p~y~~~~~-~~~~~~G------------~~v~~v~~~~~~ 178 (442)
.+.+++++++++++..+++... ...+.|+..+-+|.+... ++.. .| .+++.++.
T Consensus 97 ~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---- 171 (403)
T PRK05093 97 AERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSV-GGQPKYSDGFGPKPADITHVPF---- 171 (403)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhh-cCChhhhhcCCCCCCCcEEeCC----
Confidence 4689999999999999988651 123567777777766432 2221 11 11222221
Q ss_pred CCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC--CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 179 NFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI--QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 179 ~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~--~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
-|++.+++.+.+ ++++|+++ |.||+|.++ +.+.+++|+++|++|++++|+||+|.++.+++.. .+..
T Consensus 172 ---~d~~~l~~~l~~------~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~ 240 (403)
T PRK05093 172 ---NDLAAVKAVIDD------HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDL-FAYM 240 (403)
T ss_pred ---CCHHHHHHHhcC------CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc-hhhh
Confidence 278888888753 67666665 888888765 8899999999999999999999999987776642 2211
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc-c-ccCCCcHHHHHHHHHHhcCchhHHHHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM-S-SFTLISSQTQYLLASMLSNKKFTENYIKT 334 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~-~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 334 (442)
.... .++ +.||||+++ +|+|+||+++ ++.+.+.+... . ..+..+++.|.++.+.|+.. . -.+
T Consensus 241 ~~~~-----~pd----i~s~sK~l~-~G~rig~vv~-~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~---~--~~~ 304 (403)
T PRK05093 241 HYGV-----TPD----ILTSAKALG-GGFPIGAMLT-TAEIASHFKVGTHGSTYGGNPLACAVAEAVFDII---N--TPE 304 (403)
T ss_pred hcCC-----CCC----EEEeccccc-CCcceEEEEE-cHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH---h--hcc
Confidence 1110 112 569999998 9999999999 45666665432 2 23456888999888866421 1 123
Q ss_pred HHHHHHHHHHHHHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCE
Q 046900 335 NRERLQKRYQMIIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGW 410 (442)
Q Consensus 335 ~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~ 410 (442)
.++.++++++++.+.|++.+ +....+..|+++|+.++.... ..+.+++..|+++ ||.+.|+ +.++
T Consensus 305 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~----~~~~~~~~~l~~~-Gv~v~~~------g~~~ 373 (403)
T PRK05093 305 VLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYK----GRARDFLNAAAEE-GVMVLVA------GPDV 373 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcch----hHHHHHHHHHHHC-CeEEecC------CCCE
Confidence 45778888889998888753 222345678999999864210 1356888888887 9999874 2468
Q ss_pred EEEEeec-CCHHHHHHHHHHHHHHHHH
Q 046900 411 FRVCFAN-MSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 411 iRls~~~-~~~e~i~~~l~~l~~~l~~ 436 (442)
+|++++. ++++++++++++|.+++.+
T Consensus 374 lRl~~~~~~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 374 LRFAPSLVIEEADIDEGLARFEKAVAK 400 (403)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9997653 3899999999999998865
No 163
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.94 E-value=1e-23 Score=206.70 Aligned_cols=299 Identities=14% Similarity=0.167 Sum_probs=206.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC----CCCeEEEcCCCCcChHHhHhhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD----PGDALLVPTPYYPGFDRDLRWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~----~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~ 171 (442)
+..++.+.+.+.+.+.+| ++++++++++|+++++..++.++.. ++|.|++.++.|..+...++. .|++++.
T Consensus 56 ~~~~~~~~~~~~la~~~g----~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~-~g~~~~~ 130 (371)
T PRK13520 56 GTAKLEEEAVEMLGELLH----LPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADM-LGVELRR 130 (371)
T ss_pred cHHHHHHHHHHHHHHHhC----CCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHH-cCceEEE
Confidence 344444455555555444 4566889999999999998877644 578999999999998888874 8999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
+|.++ ++.+|++.|++.+.+ ++++|+++.++||||.+.+ +++|.++|+++|+++++|++|+.+...-..
T Consensus 131 v~~~~--~~~~d~~~l~~~i~~------~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~~ 199 (371)
T PRK13520 131 APLDD--DYRVDVKAVEDLIDD------NTIGIVGIAGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFLD 199 (371)
T ss_pred ecCCC--CCcCCHHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhhc
Confidence 98864 456899999999975 6777888889999999988 778888898999999999999864421000
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccC----------CCcHHHHHHHHHH
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT----------LISSQTQYLLASM 321 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~----------~~s~~~q~~~~~~ 321 (442)
......... .+-..+..|.+| ++++|.++|+++..++.+.+.+.....+. +.+.....++...
T Consensus 200 ~~~~~~~~~------~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a 272 (371)
T PRK13520 200 DPPNFDFSL------PGVDSITIDPHK-MGLAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAV 272 (371)
T ss_pred CCCCccccC------CCCceEEECCcc-ccCccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHH
Confidence 000000000 112234457788 45678899988876665555543211111 1122333444444
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCe-eecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCC
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIE-CLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPG 400 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg 400 (442)
++... ...+++.+++..+.++++.+.|++.|++ +..+..+ ++.++++. ..++.+.|.++ ||.+.++
T Consensus 273 l~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~v~~~~~~---------~~~v~~~L~~~-gi~v~~~ 339 (371)
T PRK13520 273 MKYLG--REGYRKVVERCMENTRWLAEELKERGFEPVIEPVLN-IVAFDDPN---------PDEVREKLRER-GWRVSVT 339 (371)
T ss_pred Hhhhc--HhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCce-EEEEecCC---------HHHHHHHHHHC-CceeccC
Confidence 43211 2234667788888899999999888888 5555555 55566652 56788888776 9999875
Q ss_pred CCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHH
Q 046900 401 SSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 401 ~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~ 435 (442)
. .++++|+|+.. .++++++++++.|+++++
T Consensus 340 ~-----~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 340 R-----CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred C-----CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 3 24679999862 289999999999998764
No 164
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=6.7e-24 Score=208.19 Aligned_cols=333 Identities=14% Similarity=0.151 Sum_probs=215.0
Q ss_pred CCCCCceeeeecccc--cc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLAEN--QV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+||+..+.. .+ .++.+.+.+.+..+.. ..+ ......++++++++++.+..+
T Consensus 25 d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~------------~~~-~~~~~~~~~~~la~~l~~~~~------ 85 (377)
T PRK02936 25 DNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDI------------WHV-SNLFTNSLQEEVASLLAENSA------ 85 (377)
T ss_pred eCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhc------------ccc-ccccCCHHHHHHHHHHHhcCC------
Confidence 344567889877642 23 3344444444432210 011 112346899999999986422
Q ss_pred CCcEEEecChHHHHHHHHHhhc-CCC-CeEEEcCCCCcChHH-hHhhhcCcEEE---EEecCCCCCC--cCCHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILA-DPG-DALLVPTPYYPGFDR-DLRWRTGIKIV---PIHCDSSNNF--QITPQALEAAY 191 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~-~~g-d~Vl~~~p~y~~~~~-~~~~~~G~~v~---~v~~~~~~~~--~~d~~~l~~~l 191 (442)
.+.+++++++++++..+++... .+| +.|++.+++|.+... .+.. .|.... ..|+.++..+ .-|++.+++.+
T Consensus 86 ~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 164 (377)
T PRK02936 86 GDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSA-TGQEKIKEGFGPLLPGFTHVPFNDIKALKEVM 164 (377)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhc-cCCccccccCCCCCCCceEeCCCCHHHHHHhc
Confidence 3589999999999999988542 234 679999998876432 2221 222110 1111110000 01688898887
Q ss_pred HHHHhcCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcE
Q 046900 192 KEAESKDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERV 270 (442)
Q Consensus 192 ~~~~~~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~v 270 (442)
.+ +++++++..+++++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+.. .+.....- ...
T Consensus 165 ~~------~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~-~~~~~~~~------~~d- 230 (377)
T PRK02936 165 NE------EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTL-FAYEQFGL------DPD- 230 (377)
T ss_pred cC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhhCC------CCc-
Confidence 53 68888888889999976 57889999999999999999999999887665532 12211111 122
Q ss_pred EEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHH
Q 046900 271 HIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIE 348 (442)
Q Consensus 271 i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 348 (442)
+.+|||+++ +|+|+||+++ ++.+.+.+.... ..+..+++.|.++.++++.... ....+.++++.+++.+
T Consensus 231 --i~t~sK~l~-~G~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-----~~~~~~~~~~~~~l~~ 301 (377)
T PRK02936 231 --IVTVAKGLG-NGIPVGAMIG-KKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ-----PSFLEEVQEKGEYFLQ 301 (377)
T ss_pred --EEEEccccc-CCCccEEEEE-cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHH
Confidence 237999999 9999999998 566766664322 2245688999999888864321 1233455566666666
Q ss_pred HHHhC--CCeee--cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHH
Q 046900 349 GLRSA--GIECL--KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTL 423 (442)
Q Consensus 349 ~L~~~--g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i 423 (442)
.|++. ++... ....|+++|++++.. ...+...|.++ ||.+.|+. .+++|+++. ..+++++
T Consensus 302 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~--------~~~~~~~l~~~-gv~v~~~g------~~~lRi~p~~~~~~~~i 366 (377)
T PRK02936 302 KLQEELEHLECVKNIRGKGLMIGIECTEE--------VAPVIEQLREE-GLLVLSAG------PNVIRLLPPLVVTKEEL 366 (377)
T ss_pred HHHHHHhhCCcEEeEeecceEEEEEecch--------HHHHHHHHHHC-CeEEecCC------CCEEEEECCcccCHHHH
Confidence 66542 22221 123568999998752 45677776555 99998842 468999963 4489999
Q ss_pred HHHHHHHHHHH
Q 046900 424 EVALKRIHNFM 434 (442)
Q Consensus 424 ~~~l~~l~~~l 434 (442)
++++++|.+++
T Consensus 367 ~~~i~~l~~~~ 377 (377)
T PRK02936 367 DQAVYLLKKVL 377 (377)
T ss_pred HHHHHHHHHhC
Confidence 99999998763
No 165
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.93 E-value=4.6e-24 Score=209.45 Aligned_cols=295 Identities=16% Similarity=0.206 Sum_probs=202.3
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccC-CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH----hHhhhcCcEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFD-LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR----DLRWRTGIKI 169 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~-~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~G~~v 169 (442)
.+..++|+.++++++ ++ .++|++|+|+++++..++.+++++||+|+++.+.|+.+.. .++ ..|+++
T Consensus 44 ~~~~~~~~~la~~~~--------~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-~~g~~~ 114 (376)
T TIGR01977 44 REVEETRQLLAKLFN--------APSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKE-QIGVEI 114 (376)
T ss_pred HHHHHHHHHHHHHhC--------cCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHH-HcCcEE
Confidence 456788888888875 33 4589999999999999999999999999999999987653 333 369999
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
+.++.+. ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|+++|+++|+|++++....
T Consensus 115 ~~v~~~~--~~~~d~~~l~~~~~~------~~~~v~~~~~~n~tG~~~~---~~~i~~l~~~~~~~livD~a~~~g~~-- 181 (376)
T TIGR01977 115 TIVKCDN--EGLISPERIKRAIKT------NTKLIVVSHASNVTGTILP---IEEIGELAQENGIFFILDAAQTAGVI-- 181 (376)
T ss_pred EEEecCC--CCCcCHHHHHHhcCC------CCeEEEEECCCCCccccCC---HHHHHHHHHHcCCEEEEEhhhccCcc--
Confidence 9998864 456899999998864 7889999999999999999 56778889999999999999974221
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc------------------cccCCCc
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM------------------SSFTLIS 311 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~------------------~~~~~~s 311 (442)
...+... +.-+++.|++|.++.|. .+|.++..+......+... ...++.+
T Consensus 182 --~~~~~~~---------~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~ 249 (376)
T TIGR01977 182 --PIDMTEL---------AIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLN 249 (376)
T ss_pred --CCCchhc---------CCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCC
Confidence 1122111 23367889999875332 3576665443311110000 0011223
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC----ceEEEEEecCCcccccChhhHHHHH
Q 046900 312 SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGN----AGLFCWMNLSPLLEEQTREGELALW 386 (442)
Q Consensus 312 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~l~ 386 (442)
.+...++.+.++. +.+.-.+..+++.++..+++.+.|.+. |+++..+. .+..+++.++.. +..++.
T Consensus 250 ~~~~~a~~~al~~--~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~ 320 (376)
T TIGR01977 250 TPGIAGLNAGIKF--IEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGI-------DSEEVA 320 (376)
T ss_pred HHHHHHHHHHHHH--HHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCC-------CHHHHH
Confidence 3333333333331 111123456677778888888888765 67665431 234666776542 245777
Q ss_pred HHHHHcCcEEEeCCCCCCC--------CCCCEEEEEee-cCCHHHHHHHHHHHHH
Q 046900 387 DSMLHEVKLNISPGSSCHC--------SEPGWFRVCFA-NMSEQTLEVALKRIHN 432 (442)
Q Consensus 387 ~~l~~~~gi~v~pg~~f~~--------~~~~~iRls~~-~~~~e~i~~~l~~l~~ 432 (442)
+.|.+++||.+.+|..+.. ...+.||+++. ..++++++.++++|++
T Consensus 321 ~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 321 DILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred HHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 7876666999999876542 23578999987 3389999999999875
No 166
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.93 E-value=4.8e-23 Score=201.99 Aligned_cols=316 Identities=14% Similarity=0.115 Sum_probs=204.8
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEE
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKI 169 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v 169 (442)
.|+...++.+|++++|++++. .+.+++++|.++.. .++.+++++||.|+++.+.|..+...+.. .++++
T Consensus 38 ~yg~~~~~~~LE~~lA~~~g~---------e~al~~~sG~~a~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l-~~~~~ 106 (392)
T PLN03227 38 FYGTIDAHLELEQCMAEFLGT---------ESAILYSDGASTTS-STVAAFAKRGDLLVVDRGVNEALLVGVSL-SRANV 106 (392)
T ss_pred ccCChHHHHHHHHHHHHHhCC---------CcEEEecCcHHHHH-HHHHHhCCCCCEEEEeccccHHHHHHHHH-cCCeE
Confidence 487777889999999999861 36677777766666 66677899999999999999998887764 77887
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHh--------cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAES--------KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~--------~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
+.++.. |++.+++.++.... ...++++|++.+|+||+|.+.+ ++++.++|++||+++|+||+
T Consensus 107 ~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~ 176 (392)
T PLN03227 107 RWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDES 176 (392)
T ss_pred EEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECc
Confidence 777643 34555554443321 1235788888889999999999 77889999999999999999
Q ss_pred CCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc---ccCC-CcHHHHHH
Q 046900 242 YSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS---SFTL-ISSQTQYL 317 (442)
Q Consensus 242 y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~---~~~~-~s~~~q~~ 317 (442)
|+ +...+.......+...- ....+..+++.|+||.+| .+.|++++ ++.+.+.++... .++. .++..+.+
T Consensus 177 ~~-~g~~g~~G~g~~~~~g~--~p~~~~Div~~slsk~~g---~~gg~v~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~a 249 (392)
T PLN03227 177 FS-FGTLGKSGRGSLEHAGL--KPMVHAEIVTFSLENAFG---SVGGMTVG-SEEVVDHQRLSGSGYCFSASAPPFLAKA 249 (392)
T ss_pred cc-ccccCCCCCcHHHHcCC--CCCCCceEEEeechhhhh---ccCcEEec-CHHHHHHHHHhCcCccccCCCCHHHHHH
Confidence 98 33223221222222110 001244688899999876 34588887 556665554322 2222 23545555
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeee----------cCCceEEEEEecCCcccccCh---hhHHH
Q 046900 318 LASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECL----------KGNAGLFCWMNLSPLLEEQTR---EGELA 384 (442)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~----------~~~~g~~~~~~~~~~~~~~~~---~~~~~ 384 (442)
+...+.... + ..+.+++++++.+++.+.|++.++... ....+.++.+.+.+....... ....+
T Consensus 250 a~~al~~~~---~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 325 (392)
T PLN03227 250 DATATAGEL---A-GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQ 325 (392)
T ss_pred HHHHHHHHh---c-CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHH
Confidence 554443211 1 234567788888899998876543321 112244566666432110000 01247
Q ss_pred HHHHHHHcCcEEEeCCCC-----CCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 385 LWDSMLHEVKLNISPGSS-----CHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 385 l~~~l~~~~gi~v~pg~~-----f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
+++.++++ |+.+.+... +....+..+|+++. ..++|+++++++.|++++++..
T Consensus 326 ~~~~~~~~-Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 326 IAHHSLSE-GVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred HHHHHHHC-CCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 78888776 999875221 11223567999986 4499999999999999987653
No 167
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.93 E-value=2.7e-23 Score=204.13 Aligned_cols=287 Identities=14% Similarity=0.174 Sum_probs=191.5
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----Hhhhc
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWRT 165 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~~ 165 (442)
+|+. .+..+|++++|++.+ .+++++++|+++++..++.+++++||+|+++.|.|+.+... ++ ..
T Consensus 60 r~~~-p~~~~Le~~iA~~~g----------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~-~~ 127 (400)
T PRK06234 60 RLGN-PTSTEVENKLALLEG----------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLT-RY 127 (400)
T ss_pred CCCC-ccHHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHh-hC
Confidence 3444 478999999999975 24678899999999999999999999999999999875543 35 38
Q ss_pred CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc--CcEEEEeccCC
Q 046900 166 GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK--NIHLVSDEIYS 243 (442)
Q Consensus 166 G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~--~~~vi~De~y~ 243 (442)
|++++.++.. |++++++.+++ ++++|++++|+||||.+.+ +++|+++|+++ ++++|+|++|+
T Consensus 128 G~~v~~vd~~-------d~e~l~~~i~~------~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~ 191 (400)
T PRK06234 128 GVEVTFVDTS-------NLEEVRNALKA------NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFC 191 (400)
T ss_pred CeEEEEECCC-------CHHHHHHHhcc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCC
Confidence 9999888742 68999998875 7899999999999999998 77777888886 99999999998
Q ss_pred cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHc--ccc--CCCcHHHHHHH
Q 046900 244 GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRM--SSF--TLISSQTQYLL 318 (442)
Q Consensus 244 ~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~--~~~--~~~s~~~q~~~ 318 (442)
...+.. ++ .. +..+++.|+||.++.+|+|+ ||++++ +.+.+.++.. ... ..+++.....+
T Consensus 192 ~~~~~~----~l-~~---------g~Divv~S~sK~l~g~g~~~gG~v~~~-~~~~~~l~~~~~~~~~g~~l~p~~a~l~ 256 (400)
T PRK06234 192 TPYIQR----PL-QL---------GADVVVHSATKYLNGHGDVIAGFVVGK-EEFINQVKLFGIKDMTGSVIGPFEAFLI 256 (400)
T ss_pred chhcCC----ch-hh---------CCcEEEeeccccccCCCCceeEEEEec-HHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 654321 11 11 33488999999998889875 999985 4555555432 111 33455555555
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-ee-c----------------CCceEEEEEecCCcccccCh
Q 046900 319 ASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIE-CL-K----------------GNAGLFCWMNLSPLLEEQTR 379 (442)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~----------------~~~g~~~~~~~~~~~~~~~~ 379 (442)
...++.. ..+.++..++...+.+.|+++ .+. +. + ..|+ .+.+++... .
T Consensus 257 ~~~l~tl-------~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~-l~s~~l~~~-----~ 323 (400)
T PRK06234 257 IRGMKTL-------QIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGA-MISFELKGG-----V 323 (400)
T ss_pred HhccCcH-------HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCc-eEEEEecCc-----H
Confidence 5444432 223344456667777777764 121 11 1 1244 445566532 1
Q ss_pred hhHHHHHHHHHHcCcEEEeCCCCCCC---------------------CCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 380 EGELALWDSMLHEVKLNISPGSSCHC---------------------SEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 380 ~~~~~l~~~l~~~~gi~v~pg~~f~~---------------------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
+...++.+.| +-.++.+.-|..... -.++.+|||++- |+.+.+++.|.+++..
T Consensus 324 ~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~ 397 (400)
T PRK06234 324 EEGKVVMNNV-KLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL---EDVDDIIADLKQALDL 397 (400)
T ss_pred HHHHHHHHhC-CcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHHH
Confidence 2344555555 322444433332210 124689999996 3456667777776654
No 168
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.93 E-value=3.1e-23 Score=197.98 Aligned_cols=302 Identities=19% Similarity=0.182 Sum_probs=217.1
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEE
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIV 170 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~ 170 (442)
++...-+.+|.+.+|+|++ .+..++.+++..++..++.+|++++|.|+.+.-.|......++. .+++++
T Consensus 80 ~G~~~~h~~LE~~lA~f~g----------~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rl-s~a~~~ 148 (388)
T COG0156 80 SGTSDLHVELEEELADFLG----------AEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRL-SRAEVR 148 (388)
T ss_pred cCCcHHHHHHHHHHHHHhC----------CCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHh-CCCcEE
Confidence 4444456789999999986 55677777778888999999999999999999999999999995 899999
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
.+.. .|++.||+.+++++..+.+.++|+...--...|.+.| +.+|++++++|+.++++||+|+-.+++..
T Consensus 149 ~f~H-------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~ 218 (388)
T COG0156 149 RFKH-------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPN 218 (388)
T ss_pred EecC-------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCC
Confidence 8875 4789999999886533323455565667789999998 88888999999999999999998887643
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc-ccc---CCCcHHHHHHHHHHhcCch
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM-SSF---TLISSQTQYLLASMLSNKK 326 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~-~~~---~~~s~~~q~~~~~~l~~~~ 326 (442)
. ..+.+.. +....+..|+++||||+||..| ||+.+ +..+.+.+.+. ..+ ...+|....++...++
T Consensus 219 G-rG~~e~~---g~~~~~vdi~~gTlsKAlGs~G---g~v~g-~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~--- 287 (388)
T COG0156 219 G-RGLAEHF---GLEPEEVDIIVGTLGKALGSSG---GYIAG-SAALIDYLRNRARPFIFSTALPPAVAAAALAALR--- 287 (388)
T ss_pred C-ccHHHHh---CCCCccceEEEEEchhhhcccC---ceeeC-cHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHH---
Confidence 2 2222222 1112356789999999999888 99998 67777777654 333 2233433333444443
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC-
Q 046900 327 FTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC- 405 (442)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~- 405 (442)
.++ .....+++++++...+.+.+...|+.+.+..+. .+.+.+.+. ..+.++...|+++ ||.+.+......
T Consensus 288 ~l~-~~~~~r~~L~~~~~~~~~~~~~~~~~~~~s~s~-I~pv~~gd~------~~a~~~s~~l~~~-Gi~v~~i~~PTVp 358 (388)
T COG0156 288 ILE-EGPERRERLQELAAFFRSLLKALGLVLLPSESP-IIPVILGDE------ERALEASRALLEE-GIYVSAIRPPTVP 358 (388)
T ss_pred HHH-hCHHHHHHHHHHHHHHHHHHHhcCCccCCCCCC-eeeeEeCCH------HHHHHHHHHHHHC-CeeEeeecCCCCC
Confidence 212 234567778888888887777667776555555 554444432 1377888899888 999987543222
Q ss_pred CCCCEEEEEee-cCCHHHHHHHHHHHHHH
Q 046900 406 SEPGWFRVCFA-NMSEQTLEVALKRIHNF 433 (442)
Q Consensus 406 ~~~~~iRls~~-~~~~e~i~~~l~~l~~~ 433 (442)
.+...+|++++ ..++++++++++.|.++
T Consensus 359 ~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 359 KGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 22357999986 34899999999988765
No 169
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.93 E-value=3.8e-23 Score=201.50 Aligned_cols=218 Identities=22% Similarity=0.232 Sum_probs=158.0
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---h
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---R 164 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~ 164 (442)
..+|+.+ -...|++++|++.+ .+++++|+|+++++.+++.+++++||+|+++.|+|......+.. .
T Consensus 45 Y~R~~~p-~~~~le~~lA~l~g----------~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~ 113 (382)
T TIGR02080 45 YSRSGNP-TRDLLQQALAELEG----------GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKK 113 (382)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 3456554 35788888998864 46799999999999999999999999999999999865443321 2
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|+++..++. .|++.+++++++ ++|+|++++|+||||.+++ +++|+++|++++++||+|++|..
T Consensus 114 ~~~~v~~~d~-------~d~~~l~~ai~~------~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~ 177 (382)
T TIGR02080 114 GCFRVLFVDQ-------GDEQALRAALAQ------KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLS 177 (382)
T ss_pred cCeEEEEECC-------CCHHHHHHhcCc------CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 3556555431 378899998865 7899999999999999998 66788888899999999999986
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASM 321 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~ 321 (442)
+... .++ .+ +..++++|+||.++ .+|++.|++++.++.+.+.+...... ..++++.+..+..-
T Consensus 178 ~~~~----~pl-~~---------gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~ 243 (382)
T TIGR02080 178 PALQ----NPL-AL---------GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRG 243 (382)
T ss_pred cccC----Cch-hh---------CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcc
Confidence 4321 121 12 12378899999885 57889999988667776666544333 34566666555443
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
++. +....++..++...+.+.|+++
T Consensus 244 l~t-------l~~R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 244 LRT-------LVARMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred cch-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 332 2333455567777888888765
No 170
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.93 E-value=1.4e-23 Score=206.89 Aligned_cols=269 Identities=17% Similarity=0.184 Sum_probs=184.1
Q ss_pred CCcEEEecChHHHHHHHHHhhcC---------CC-CeEEEcCCCCcChH-HhHhhhcCcE------------EEEEecCC
Q 046900 120 LNRIVVTAGATAANELLTFILAD---------PG-DALLVPTPYYPGFD-RDLRWRTGIK------------IVPIHCDS 176 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~---------~g-d~Vl~~~p~y~~~~-~~~~~~~G~~------------v~~v~~~~ 176 (442)
.+.+++++++++|+..+++.... +| +.|+...-+|.+.. ..+.. .+.. +..++.
T Consensus 97 ~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-- 173 (396)
T PRK04073 97 KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSL-SSEEEYKRGFGPMLPGIKKIPY-- 173 (396)
T ss_pred CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhh-cCCcccccCCCCCCCCceEeCC--
Confidence 46899999999999998887631 33 67777777776543 33321 2211 112221
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHH-HHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccH
Q 046900 177 SNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRS-VLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSI 255 (442)
Q Consensus 177 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~-~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~ 255 (442)
.|++.+++.+.+ +++++++++|+||||.+++.+ .+++|.++|++||+++|+||+|..+...+..+.
T Consensus 174 -----~d~~~l~~~i~~------~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-- 240 (396)
T PRK04073 174 -----GDLEALKAAITP------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-- 240 (396)
T ss_pred -----CCHHHHHHhccc------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH--
Confidence 167888887754 677888888899999998765 599999999999999999999998655442111
Q ss_pred HHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHHHHHH
Q 046900 256 AEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSNKKFTENYIK 333 (442)
Q Consensus 256 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 333 (442)
.+.. +...-+.+|||.+|.+|+|+||+++ ++.+.+.+.. ....+..+++.|.++.+.|+... + .
T Consensus 241 ~~~~--------~~~pdi~~~sK~lg~gg~~ig~~~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~--~---~ 306 (396)
T PRK04073 241 CDWD--------NVTPDMYILGKALGGGVFPISCVAA-NRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLE--E---E 306 (396)
T ss_pred hhhc--------CCCCCEEEecccccCCCCcceEEEE-cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--h---c
Confidence 1111 1111234689999988899999999 5666666543 22335578889988888876211 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHhCC---CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCE
Q 046900 334 TNRERLQKRYQMIIEGLRSAG---IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGW 410 (442)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~~g---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~ 410 (442)
...+..+++++++.+.|++.+ +....+. |+|++++++. .+.+++++|+++ ||.+.+. .+++
T Consensus 307 ~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~-g~~~~~~~~~--------~~~~~~~~l~~~-Gv~~~~~------~~~~ 370 (396)
T PRK04073 307 KLPERSLELGEYFKEQLKEIDNPMIKEVRGR-GLFIGVELNE--------PARPYCEALKEE-GLLCKET------HETV 370 (396)
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCcccceecc-eEEEEEEecc--------hHHHHHHHHHHC-CeEEecC------CCCE
Confidence 233455666788888887753 3333344 5678888764 256788888776 9999863 2468
Q ss_pred EEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 411 FRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 411 iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
+|+++. ..+++++++++++|++++
T Consensus 371 iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 371 IRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred EEEECCcccCHHHHHHHHHHHHHHh
Confidence 999964 338999999999999875
No 171
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.93 E-value=2.6e-23 Score=208.44 Aligned_cols=291 Identities=19% Similarity=0.232 Sum_probs=200.6
Q ss_pred HHHHHHHHHHH---HHHhCCCCccCCCcEEEecChHHHHHHHHHhhc-CCCCeEEEcCCCCcChHHhHhh---hcCcEEE
Q 046900 98 KSFRQAMASFM---EQIRGGRAKFDLNRIVVTAGATAANELLTFILA-DPGDALLVPTPYYPGFDRDLRW---RTGIKIV 170 (442)
Q Consensus 98 ~~lr~~ia~~l---~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~ 170 (442)
..++++++++. .+.+| ++++++.+|+|+++++..++.++. .+||.|+++.+.|+.+...+.. ..|++++
T Consensus 108 ~g~~~~~~e~~~~la~l~g----~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~ 183 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTG----MDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVV 183 (447)
T ss_pred hHHHHHHHHHHHHHHHHhC----CCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEE
Confidence 44666666444 66655 567789999999999999988874 7899999999999988876552 2699999
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE--eccCCcCCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS--DEIYSGSAFS 248 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~--De~y~~~~~~ 248 (442)
.+++++ + .+|++++++.+.+ ++++|++++| ||||.+.+ +++|.++|+++|+++++ |.+...+.
T Consensus 184 ~v~~~~--~-~~d~~~l~~~i~~------~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~-- 248 (447)
T PRK00451 184 EVPYED--G-VTDLEALEAAVDD------DTAAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLL-- 248 (447)
T ss_pred EecCCC--C-CCCHHHHHHhcCC------CeEEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccC--
Confidence 999875 3 6899999998864 7899999999 89999976 88888999999999988 43321110
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEe---cCcccCCCCCceeEEEeecCHHHHHHH------------------------
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVY---SLSKDLGLPGFRVGTIYSYNDKVVTTA------------------------ 301 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~---S~SK~~g~~G~RiG~i~~~~~~~~~~~------------------------ 301 (442)
..... .+..+++. +|||.+++.|+|+||++++ +.+.+.+
T Consensus 249 ----~~~~~---------~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 314 (447)
T PRK00451 249 ----KPPGE---------YGADIVVGEGQPLGIPLSFGGPYLGFFATR-KKLVRQMPGRLVGETVDADGKRGFVLTLQAR 314 (447)
T ss_pred ----CCccc---------CCCCEEEECCCcCCCCCCCCCCCchHHHhh-HHHHhhCCCCEeeeecccCCCeeeEeecccc
Confidence 01111 12234444 7888888889999999884 4444432
Q ss_pred ----HHccccCCCc--HHHH-HHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEE--EecC
Q 046900 302 ----RRMSSFTLIS--SQTQ-YLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCW--MNLS 371 (442)
Q Consensus 302 ----~~~~~~~~~s--~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~--~~~~ 371 (442)
+........+ ...| .+++..+... .+..+++.++++.++++++.+.|++. |+++. ++.+|.+ ++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~--~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~v~~~ 390 (447)
T PRK00451 315 EQHIRREKATSNICTNQALNALAAAIYMSLL--GPEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPFFNEFVVRLP 390 (447)
T ss_pred ccccccccccccccccHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCeEEEEEEecC
Confidence 1111111111 1223 2222222211 13357788899999999999999987 67765 3445544 4443
Q ss_pred CcccccChhhHHHHHHHHHHcCcEE-EeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 372 PLLEEQTREGELALWDSMLHEVKLN-ISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 372 ~~~~~~~~~~~~~l~~~l~~~~gi~-v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
. +..+++++|+++ ||. ..++..|+....+++|+++. .-++++++++++.|++++
T Consensus 391 ~--------~~~~~~~~L~~~-gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 391 K--------PAEEVNEALLEK-GILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred C--------CHHHHHHHHHhc-CCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 1 256889999887 665 34566665434578999986 228999999999998764
No 172
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.93 E-value=6.9e-23 Score=198.95 Aligned_cols=285 Identities=15% Similarity=0.187 Sum_probs=194.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCC---------------eEEEcCCCCcCh---
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGD---------------ALLVPTPYYPGF--- 157 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd---------------~Vl~~~p~y~~~--- 157 (442)
+.+++++++++++.+.+| .+++++|+|+++++.+++.+++++|| .|+++.|.|..|
T Consensus 42 ~~~~~~~~~~~~~a~~~g------~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~ 115 (363)
T TIGR01437 42 EIKELVNKTGEYIANLLG------VEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAP 115 (363)
T ss_pred CHHHHHHHHHHHHHHhhC------CCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCc
Confidence 467888999988888765 45799999999999999999999998 999999888766
Q ss_pred -HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE-EeCCCCCCCcCCCHHHHHHHHHHHHhcCcE
Q 046900 158 -DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL-ITNPSNPLGATIQRSVLEELLDFATRKNIH 235 (442)
Q Consensus 158 -~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~-l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~ 235 (442)
...+. ..|++++.++.+ +.+|++.+++++++ ++++++ +++|+||+|.+.+ +++|+++|++||++
T Consensus 116 ~~~~~~-~~g~~~v~v~~~----~~~d~~~le~ai~~------~t~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~ 181 (363)
T TIGR01437 116 VETMVR-LGGGKVVEAGYA----NECSAEQLEAAITE------KTAAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLP 181 (363)
T ss_pred hHHHHH-hcCCeEEEEcCC----CCCCHHHHHHhcCh------hceEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCe
Confidence 35556 389999988763 35899999999976 778765 5788999999999 56789999999999
Q ss_pred EEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc-------C
Q 046900 236 LVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF-------T 308 (442)
Q Consensus 236 vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~-------~ 308 (442)
+|+|++|+. + ..+...+ +..+++.|+||.+ +|++.|+++. ++.+.+.++..... +
T Consensus 182 vivD~a~~~---~---~~~~~~~---------g~D~~~~S~~K~l--~gp~~G~l~~-~~~~i~~~~~~~~~~~~~~~~~ 243 (363)
T TIGR01437 182 LIVDAAAEE---D---LQKYYRL---------GADLVIYSGAKAI--EGPTSGLVLG-KKKYIEWVKLQSKGIGRAMKVG 243 (363)
T ss_pred EEEECCCCC---c---hHHHHHc---------CCCEEEEeCCccc--CCCceEEEEE-cHHHHHHHHhccCCCcceeccC
Confidence 999999972 1 1111222 2236778999976 6888999998 44444444322111 1
Q ss_pred CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC--CceE-----EEEEecCCcccccChh
Q 046900 309 LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKG--NAGL-----FCWMNLSPLLEEQTRE 380 (442)
Q Consensus 309 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~g~-----~~~~~~~~~~~~~~~~ 380 (442)
..+..++.++...+.. +..+..+.+.++++.+.+.|.+. |+++..+ ..+. -+.++.... + .
T Consensus 244 ~~~~~gl~aAl~~~~~------~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~----g-~ 312 (363)
T TIGR01437 244 KENILGLTAALEQYLS------TGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESEL----G-M 312 (363)
T ss_pred HHHHHHHHHHHHHHHc------cCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCC----C-C
Confidence 1111222233322222 11223334445677888999886 7877632 2111 111222110 0 1
Q ss_pred hHHHHHHHHHHcCc--EEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 381 GELALWDSMLHEVK--LNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 381 ~~~~l~~~l~~~~g--i~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+..++.+.|.++ | |.+++ .| ...+.+|+++...+++|++.++++|++++
T Consensus 313 ~~~~l~~~L~~~-~~~I~~r~--~~--~~~~~~~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 313 TAADVVQALRQG-EPAIYTRG--YK--ANEGIIEIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred CHHHHHHHHhcC-CCCEEEee--ee--ecCCeEEEEeecCCHHHHHHHHHHHHHhC
Confidence 367888888554 6 77765 23 24578999998778999999999998763
No 173
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=9.9e-23 Score=198.70 Aligned_cols=218 Identities=23% Similarity=0.249 Sum_probs=161.8
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---h
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---R 164 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~ 164 (442)
..+|+++ ....|++++|++.+ .+++++++|+++++..++.+++++||+|+++.|+|+.....+.. .
T Consensus 46 Y~R~~~p-t~~~L~~~lA~l~g----------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~ 114 (386)
T PRK08045 46 YSRRGNP-TRDVVQRALAELEG----------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKR 114 (386)
T ss_pred eeCCCCc-cHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 4556655 45889999999864 34699999999999999999999999999999999864433221 2
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|.++..++ ..|++.+++.+++ ++++|++++|+||||.+++ +++|.++|+++++++|+|++|..
T Consensus 115 ~gi~v~~vd-------~~d~e~l~~~l~~------~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~ 178 (386)
T PRK08045 115 GCYRVLFVD-------QGDEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLS 178 (386)
T ss_pred CCeEEEEeC-------CCCHHHHHHhccc------CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCc
Confidence 345665553 1578999988864 7899999999999999998 66777888899999999999986
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASM 321 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~ 321 (442)
... ..++ .+. .-++++|+||.++ .++++.|++++.++.+.+.+...... ...+++.++.+...
T Consensus 179 ~~~----~~pl-~~g---------aDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rg 244 (386)
T PRK08045 179 PAL----QNPL-ALG---------ADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRG 244 (386)
T ss_pred ccc----CCch-hhC---------CCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhh
Confidence 432 1122 221 1278999999985 56688999988666666555433222 34678888887777
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
++. +..+.++..+++..+.+.|+++
T Consensus 245 l~t-------l~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 245 LRT-------LVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred hcc-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 765 3445566777888888888876
No 174
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.92 E-value=2.6e-23 Score=206.88 Aligned_cols=347 Identities=14% Similarity=0.140 Sum_probs=218.8
Q ss_pred CCCCCCceeeeeccc--cc--ccHHHHHHHHHhCCCCcccCCCCCCCCcccccC-CCcchHHHHHHHHHHHHHHhCCCCc
Q 046900 43 ESTNPSGVIQMGLAE--NQ--VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQ-DYHGLKSFRQAMASFMEQIRGGRAK 117 (442)
Q Consensus 43 ~~~~~~~~i~l~~~~--n~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~ 117 (442)
-+.....+||+..+. .. ++++.+.+.+.+.... ...|. +..+..+|+++|++++.
T Consensus 43 ~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~------------~~~~~~~~~~~~~lae~l~~~~~-------- 102 (423)
T TIGR00713 43 YDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALER------------GTSYGAPTEAEILLAKEIISRVP-------- 102 (423)
T ss_pred EeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHh------------CCcCCCCCHHHHHHHHHHHHhCC--------
Confidence 344567788987654 22 2345555555544321 11232 34577899999998753
Q ss_pred cCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhh--cCcEEEEEecCCC-------CCCc---CC
Q 046900 118 FDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWR--TGIKIVPIHCDSS-------NNFQ---IT 183 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~--~G~~v~~v~~~~~-------~~~~---~d 183 (442)
..++|++++|+++++..+++... ...++|+...++|.++...+... .|......+..+. ..+. .|
T Consensus 103 -~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 181 (423)
T TIGR00713 103 -SVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYND 181 (423)
T ss_pred -cccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCC
Confidence 13689999999999999887532 24589999999999875433210 1111111111000 0000 27
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEe-CCCCCCCcCCC-HHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhh
Q 046900 184 PQALEAAYKEAESKDMRVRGVLIT-NPSNPLGATIQ-RSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEA 261 (442)
Q Consensus 184 ~~~l~~~l~~~~~~~~~~~~v~l~-~P~NPtG~~~~-~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~ 261 (442)
++.+++.+.++ +.++++|++. +|+| +|.+.+ .+.+++|.++|++|++++|+||+|..+.++ ..+ ......-
T Consensus 182 ~~~l~~~i~~~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g-~~~--~~~~~~~ 254 (423)
T TIGR00713 182 LEALEEVFEEY---GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVA-LGG--AQEYFGV 254 (423)
T ss_pred HHHHHHHHHHc---CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccC-cch--hHHHhCC
Confidence 89999988742 2367777775 7788 798887 588999999999999999999999887442 221 1111110
Q ss_pred hcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-----ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHH
Q 046900 262 RQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-----MSSFTLISSQTQYLLASMLSNKKFTENYIKTNR 336 (442)
Q Consensus 262 ~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 336 (442)
.++ +.+|||.++ +|+|+||+++ ++.+.+.+.. ....+..+++++.++.+.|+...- ..+.++.+
T Consensus 255 ----~pD----i~t~sK~l~-~G~pig~v~~-~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~-~~~~~~~~ 323 (423)
T TIGR00713 255 ----EPD----LTTLGKIIG-GGLPVGAFGG-RREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDE-EGVYTELD 323 (423)
T ss_pred ----Ccc----hhhhhhhhc-CCCceeeeeE-HHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 122 347999999 9999999999 5666666642 112345788888887777763211 11355666
Q ss_pred HHHHHHHHHHHHHHHhCCCeeec-CCceEE-EEEecCCccc-----ccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCC
Q 046900 337 ERLQKRYQMIIEGLRSAGIECLK-GNAGLF-CWMNLSPLLE-----EQTREGELALWDSMLHEVKLNISPGSSCHCSEPG 409 (442)
Q Consensus 337 ~~~~~~~~~l~~~L~~~g~~~~~-~~~g~~-~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~ 409 (442)
+..++.++.+.+.++++++.... ..|+++ +++..+...+ ..+......++..|+++ ||.+.++ .| +
T Consensus 324 ~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~-~~-----~ 396 (423)
T TIGR00713 324 ELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDK-GVFLPPS-QF-----E 396 (423)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHC-CeEEecC-Cc-----c
Confidence 67777778888888777765532 344433 3343221100 00111234677788775 9998753 22 3
Q ss_pred EEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 410 WFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 410 ~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
.+|+++.. +++++++++++|.+++.+
T Consensus 397 ~~~l~~~~-t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 397 ACFLSAAH-TEEDIENTIEAAEEVFAE 422 (423)
T ss_pred ceeeECCC-CHHHHHHHHHHHHHHHhh
Confidence 47898875 899999999999998865
No 175
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.92 E-value=6.9e-23 Score=200.59 Aligned_cols=290 Identities=16% Similarity=0.199 Sum_probs=192.9
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---h
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---R 164 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~ 164 (442)
..+|+++. ..+|++.+|++++ .++.+++++++.++..++.+++++||+|+++.|.|+.....+.. .
T Consensus 55 y~r~~~pt-~~~Le~~lA~l~G----------~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~ 123 (386)
T PRK06767 55 YSRLGNPT-VKLFEERMAVLEG----------GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEK 123 (386)
T ss_pred ccCCCCcc-hHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhh
Confidence 34565553 5899999999975 23345555556799999989999999999999998876554332 2
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|+++..++. .|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.
T Consensus 124 ~gi~~~~~~~-------~d~~~l~~~i~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~ 187 (386)
T PRK06767 124 FMITHSFCDM-------ETEADIENKIRP------NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCS 187 (386)
T ss_pred cCeEEEEeCC-------CCHHHHHHhhCc------CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 4666555432 368889888764 7899999999999999998 67778888899999999999975
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHccc-c-CCCcHHHHHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRMSS-F-TLISSQTQYLLASM 321 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~~~-~-~~~s~~~q~~~~~~ 321 (442)
..+. . ++ .. +..+++.|+||.++.+|.|+ ||++++++.+.+..+.... . ..++++.++++...
T Consensus 188 ~~~~-~---pl-~~---------g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~ 253 (386)
T PRK06767 188 PYLQ-R---PL-EL---------GCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRG 253 (386)
T ss_pred cccC-C---ch-hc---------CCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcC
Confidence 3321 1 11 11 22377889999998789885 8999865555444433222 2 23455555554444
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCee-ec-----------CCceEEEEEecCCcccccChhhHHHHHHH
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIEC-LK-----------GNAGLFCWMNLSPLLEEQTREGELALWDS 388 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~-----------~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (442)
++. +....++..++...+.+.|+++ +++. .- ..+| .+.+++... .++..++.+.
T Consensus 254 L~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg-~vsf~l~~~-----~~~~~~f~~~ 320 (386)
T PRK06767 254 LKT-------LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGG-VISFSIKGG-----KEETQAFIND 320 (386)
T ss_pred CCc-------HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCc-eEEEEEcCC-----HHHHHHHHHh
Confidence 432 2344566678888899999886 5653 21 2344 444556432 1245677777
Q ss_pred HHHcCcEEEeCCCCCCC---------------------CCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 389 MLHEVKLNISPGSSCHC---------------------SEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 389 l~~~~gi~v~pg~~f~~---------------------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
| +..++.+.-|..... -.++.+|||++- |+.+.+++-|.+++.
T Consensus 321 l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~ 384 (386)
T PRK06767 321 L-HFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALK 384 (386)
T ss_pred C-CccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 7 334666665543211 123689999996 446777777777765
No 176
>PRK14012 cysteine desulfurase; Provisional
Probab=99.92 E-value=3.8e-23 Score=204.60 Aligned_cols=294 Identities=18% Similarity=0.235 Sum_probs=197.9
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc----CCCCeEEEcCCCCcChHHhHhh--hcCcEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA----DPGDALLVPTPYYPGFDRDLRW--RTGIKI 169 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v 169 (442)
...++|+.+|++++ +++++|++++|+++++.+++.++. .+||.|+++.++|+.+...+.. ..|+++
T Consensus 50 ~~~~~r~~ia~~~g--------~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~ 121 (404)
T PRK14012 50 AVDIARNQIADLIG--------ADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEV 121 (404)
T ss_pred HHHHHHHHHHHHcC--------cCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEE
Confidence 35677888888765 567899999999999999887763 7899999999999887554432 259999
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
+.++.++ ++.+|++.|++.+++ +++++++++++||||.+++ +++|.++|+++++++|+|++++. +
T Consensus 122 ~~v~~~~--~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~----g 186 (404)
T PRK14012 122 TYLDPQS--NGIIDLEKLEAAMRD------DTILVSIMHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSV----G 186 (404)
T ss_pred EEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhc----C
Confidence 9998875 356899999999865 7889999999999999988 67888889999999999999973 2
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc--------ccCCCcHHHHHHHHHH
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS--------SFTLISSQTQYLLASM 321 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--------~~~~~s~~~q~~~~~~ 321 (442)
.....+... +--+++.|++|.+| |+ ++|+++++++.......... ..+..+......+.+.
T Consensus 187 ~~~~~~~~~---------~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~a 255 (404)
T PRK14012 187 KVPIDLSKL---------KVDLMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEA 255 (404)
T ss_pred CcccCcccC---------CCCEEEEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHH
Confidence 111122222 12256679999887 54 68998885543221111000 0111222222222233
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC-----CceEEEEEecCCcccccChhhHHHHHHHHHHcCcE
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKG-----NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKL 395 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi 395 (442)
+. ..+.......++.++.++++.+.|++. ++.+..+ ...+++|+.+.+ ..++...| .++
T Consensus 256 l~---~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l---~~~ 320 (404)
T PRK14012 256 AR---IAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVE---------GESLIMAL---KDL 320 (404)
T ss_pred HH---HHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcC---------HHHHHHhC---CCe
Confidence 32 112234455667777788888888765 4544321 234456665532 23454444 277
Q ss_pred EEeCCCCCCCC-----------------CCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 396 NISPGSSCHCS-----------------EPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 396 ~v~pg~~f~~~-----------------~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
.|..|..|.+. ..+.+|+++. ..++++++++++.|+++++.++
T Consensus 321 ~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 321 AVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred EEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 78777665431 1367999997 3489999999999999988763
No 177
>PRK06460 hypothetical protein; Provisional
Probab=99.92 E-value=4.9e-23 Score=200.64 Aligned_cols=212 Identities=18% Similarity=0.159 Sum_probs=148.0
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCc----ChHHhHhhhcCcEEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYP----GFDRDLRWRTGIKIV 170 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~~G~~v~ 170 (442)
....+|++++|++++ . ...+++ +++++++..++.+++++||+|+++.|.|. .+...++ ..|+++.
T Consensus 45 p~~~~L~~~lA~l~g--------~-~~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~-~~G~~v~ 113 (376)
T PRK06460 45 PTVLELTKKIVELEN--------A-EMGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLK-NWGVNVD 113 (376)
T ss_pred ccHHHHHHHHHHHhC--------C-CcEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHH-hhCcEEE
Confidence 367899999999976 2 234555 44568999999999999999999987664 3445566 4899988
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
.++.+. .+.+++.++ .++++|++++|+||||.+++. ++|+++|+++|++||+|++|+... .
T Consensus 114 ~~~~~~-------~~~l~~~~~------~~tklV~l~sp~NPtG~v~d~---~~I~~la~~~g~~vivDea~~~~~-~-- 174 (376)
T PRK06460 114 ASNPGS-------DNIIEKAKS------KRYDVVFVENITNPLLRVVDI---TELSKVCKENGSILIVDATFSTPI-N-- 174 (376)
T ss_pred EECCCC-------HHHHHHhcC------CCceEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCcCccc-c--
Confidence 887542 233443322 378999999999999999995 567888889999999999997532 1
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHH
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
..+ +. .+..++++|+||.++ ..+.|+||+++ ++.+.+.+++....++.+... ..+..++...+
T Consensus 175 -~~~---l~-------~~~divv~S~sK~l~G~~~~~~G~~~~-~~~l~~~l~~~~~~~g~~~~~-~~a~~~l~~~~--- 238 (376)
T PRK06460 175 -QKP---LE-------LGADIVVHSASKFLAGHNDVIAGLAAG-YGKLLNVIDQMRRTLGTSLDP-HAAYLTLRGIK--- 238 (376)
T ss_pred -CCh---hh-------cCCCEEEeecceeccCCCCceEEEEec-CHHHHHHHHHHHHhcCCCCCH-HHHHHHHhchh---
Confidence 111 11 134588999999985 22368999998 566766666544443332211 22333344333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+++.+.+++.++++.+.+.|+++
T Consensus 239 -~l~~r~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 239 -TLKIRMDVINRNAEQIAEFLEGH 261 (376)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHcC
Confidence 45667778889999999999875
No 178
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.92 E-value=9.8e-23 Score=199.51 Aligned_cols=208 Identities=18% Similarity=0.240 Sum_probs=150.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH----hHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR----DLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~G~~v~~v 172 (442)
..+|++.+|++++ .+++++++|+++++..++.+++++||+|+++.+.|.+... .+. ..|++++.+
T Consensus 63 ~~~le~~la~l~g----------~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~-~~G~~v~~v 131 (390)
T PRK08133 63 VTMFQERLAALEG----------AEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFA-RFGIETTFV 131 (390)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHH-HcCcEEEEE
Confidence 5788888888764 4568999999999999999999999999999999977543 344 389999988
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+++ |++.+++.+++ ++|+|++++|+||||.+.+ +++|+++|+++|++||+|++|+...+..
T Consensus 132 d~~-------d~~~l~~~i~~------~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~--- 192 (390)
T PRK08133 132 DLT-------DLDAWRAAVRP------NTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ--- 192 (390)
T ss_pred CCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence 753 67889888864 7899999999999999987 7888889999999999999997543211
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHH-cccc-CCCcHHHHHHHHHHhcCchhHH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARR-MSSF-TLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~-~~~~-~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
++ .. +..+++.|+||.++.+|.++ ||+++ ++.+.+.+.. .... ..+++..+..+ +...+
T Consensus 193 -pl-~~---------g~Divv~S~sK~~~g~g~~~GG~vv~-~~~~~~~~~~~~~~~g~~~~~~~a~~~---l~gl~--- 254 (390)
T PRK08133 193 -PL-KL---------GADVVIHSATKYLDGQGRVLGGAVVG-SKELMEEVFGFLRTAGPTLSPFNAWVF---LKGLE--- 254 (390)
T ss_pred -ch-hh---------CCcEEEeecceeecCCcceEeEEEEc-CHHHHHHHHHHHHHhCCCCCHHHHHHH---Hcccc---
Confidence 11 12 22377899999998889998 55656 4444333332 2222 22344443333 33222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
.+..+.++..+++..+.+.|++.
T Consensus 255 -tl~~R~~~~~~~a~~la~~L~~~ 277 (390)
T PRK08133 255 -TLSLRMEAHSANALALAEWLEAH 277 (390)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhC
Confidence 24444555667788888998876
No 179
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=8.9e-23 Score=199.90 Aligned_cols=290 Identities=12% Similarity=0.130 Sum_probs=201.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCC-cEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChH-HhHhhhcCcEEE--
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLN-RIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFD-RDLRWRTGIKIV-- 170 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~-~~~~~~~G~~v~-- 170 (442)
..++++.+|+.+.. .++ .+++++++++++..+++... ..++.|++.+.+|.+.. ..+.. .|.+..
T Consensus 68 ~~~~~~~la~~l~~--------~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~-~~~~~~~~ 138 (375)
T PRK04260 68 LNSLQEEVAQKLIG--------DKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSA-TGQDKIKD 138 (375)
T ss_pred CCHHHHHHHHHHhc--------CcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhc-cCCcccCC
Confidence 46788899987752 233 46889999999998877652 34578888888887633 33321 222111
Q ss_pred -------EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC-HHHHHHHHHHHHhcCcEEEEeccC
Q 046900 171 -------PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ-RSVLEELLDFATRKNIHLVSDEIY 242 (442)
Q Consensus 171 -------~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~-~~~l~~l~~~~~~~~~~vi~De~y 242 (442)
.++.. . ..|++.+++.+.+ ++.++++.+++|++|.+.+ .+-++++.++|+++|+++|+||+|
T Consensus 139 ~~~~~~~~~~~~---~-~~dl~~l~~~l~~------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~ 208 (375)
T PRK04260 139 GFGDGVPHFSYA---I-FNDLNSVKALVNK------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQ 208 (375)
T ss_pred CCCCCCCCeEEe---C-CCCHHHHHHhcCC------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 01100 0 1378888887743 6778888889999998754 566999999999999999999999
Q ss_pred CcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHH
Q 046900 243 SGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLAS 320 (442)
Q Consensus 243 ~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~ 320 (442)
..+...+.. .+...... .++ +.||||+++ +|+|+||++++ +.+.+.+.. ....+..+++.+.++.+
T Consensus 209 ~g~g~~g~~-~~~~~~~~-----~pd----i~t~sK~l~-~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~a 276 (375)
T PRK04260 209 TGMGRTGKL-YAFEHYGI-----EPD----IFTLAKGLA-NGVPVGAMLAK-SSLGGAFGYGSHGSTFGGNKLSMAAASA 276 (375)
T ss_pred hCCCcccch-hhhHhhCC-----CCC----EEEeccccc-CCcceEEEEEc-HHHHhhcCCCCCCCCCCcCHHHHHHHHH
Confidence 876544431 12111111 122 348999998 89999999995 555555543 22235568889999999
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCC
Q 046900 321 MLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPG 400 (442)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg 400 (442)
+++.... ++++++.++..+..++.+.+.+.+.+.-...+..|+++|++++. +..++.+++.++ ||.+.|+
T Consensus 277 ~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~l~~~-Gi~v~~~ 346 (375)
T PRK04260 277 TLDIMLT-AGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETTA--------DLSQLVEAARDK-GLIVLTA 346 (375)
T ss_pred HHHHHHh-hHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEecC--------cHHHHHHHHHhC-CCEEecC
Confidence 8876443 35567777888888888888887664212223478899999843 256788888776 9999874
Q ss_pred CCCCCCCCCEEEEEe-ecCCHHHHHHHHHHHHHH
Q 046900 401 SSCHCSEPGWFRVCF-ANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 401 ~~f~~~~~~~iRls~-~~~~~e~i~~~l~~l~~~ 433 (442)
+...+|+++ ..++++++++++++|+++
T Consensus 347 ------~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 347 ------GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred ------CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 236799999 566899999999999875
No 180
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.92 E-value=3e-22 Score=198.90 Aligned_cols=311 Identities=11% Similarity=0.096 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHh---hcCCCCeEEEcCCCCcChHHhHhhhcCcEE-------
Q 046900 100 FRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFI---LADPGDALLVPTPYYPGFDRDLRWRTGIKI------- 169 (442)
Q Consensus 100 lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~---l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v------- 169 (442)
...++|+++....+ .+. .+.++++++++++++.+++. +.++ ..|+...++|.+....+.. .+...
T Consensus 85 ~~~~la~~l~~~~~--~~~-~~~~~f~~sGsea~e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~-~~~~~~~~~~~~ 159 (425)
T PRK08088 85 PYLELCEKMNQKVP--GDF-AKKTLLVTTGSEAVENAVKIARAATKR-SGVIAFTGAYHGRTHYTLA-LTGKVNPYSAGM 159 (425)
T ss_pred HHHHHHHHHHHhCC--CCC-CCEEEEeCCcHHHHHHHHHHHHHHhCC-CeEEEECCccCCccHHHHH-hhCCCCccccCC
Confidence 34478888876543 111 14666666666766655544 3334 4566669999887655442 22211
Q ss_pred ---------EEEecCCCCCCcCC--HHHHHHHHHHHHhcCCceeEEEEeCC--CCCCCcCCCHHHHHHHHHHHHhcCcEE
Q 046900 170 ---------VPIHCDSSNNFQIT--PQALEAAYKEAESKDMRVRGVLITNP--SNPLGATIQRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 170 ---------~~v~~~~~~~~~~d--~~~l~~~l~~~~~~~~~~~~v~l~~P--~NPtG~~~~~~~l~~l~~~~~~~~~~v 236 (442)
+++|.+. .+...+ ++.|++.+.+.. ...++.+++ ..| +|++....+.+.+++|+++|++|++++
T Consensus 160 ~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~~~~-~~~~~aavi-~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~l 236 (425)
T PRK08088 160 GLMPGHVYRALYPCPL-HGVSEDDAIASIERIFKNDA-APEDIAAII-IEPVQGEGGFYAASPAFMQRLRALCDEHGIML 236 (425)
T ss_pred CCCCCCcEEcCCCccc-cCccHHHHHHHHHHHHHhcc-CCCceEEEE-ECcccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 1122211 111111 455777765211 123455544 445 578777889999999999999999999
Q ss_pred EEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--cccCCCcHHH
Q 046900 237 VSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSFTLISSQT 314 (442)
Q Consensus 237 i~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~~~~s~~~ 314 (442)
|+||+|.++.+.+. ...+.. .+.+..+.||||.++ +|+|+||+++ ++.+.+.+... ...+..+++.
T Consensus 237 I~Dev~~g~g~~g~----~~~~~~------~~~~pdi~s~sK~l~-~G~rig~v~~-~~~~~~~~~~~~~~~t~~~~~~~ 304 (425)
T PRK08088 237 IADEVQTGAGRTGT----LFAMEQ------MGVAADLTTFAKSIA-GGFPLAGVTG-RAEVMDAIAPGGLGGTYAGNPIA 304 (425)
T ss_pred EEeccccCCCcCcc----hhHHhh------cCCCCCEEEEecccc-CCCcceeeEe-cHHHHhhcCCCCCCCCCCcCHHH
Confidence 99999998655442 212211 133344789999998 9999999999 55666655432 2235568899
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eeecCCceEEEEEecCCcccc--cChhhHHHHHHHHHH
Q 046900 315 QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGI-ECLKGNAGLFCWMNLSPLLEE--QTREGELALWDSMLH 391 (442)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~l~~ 391 (442)
|.++.++|+.... ++++++.++..++.++.+.+.+.+.+. ...... |+++|+.+...... .......+++..+++
T Consensus 305 ~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~ 382 (425)
T PRK08088 305 CAAALAVLKVFEQ-ENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHSKPNAKLTAQIVARARD 382 (425)
T ss_pred HHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHHh
Confidence 9999999986543 455666666655555555554444432 122222 78999998432110 111236778888877
Q ss_pred cCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 392 EVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 392 ~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+ ||.+.|+..| ...+||+++ .++++++++++++|.+++++.
T Consensus 383 ~-Gv~~~~~~~~----~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 383 K-GLILLSCGPY----YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred C-CCEEecCCCC----CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 6 9998886544 367999998 558999999999999998753
No 181
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.92 E-value=1.6e-22 Score=199.71 Aligned_cols=347 Identities=14% Similarity=0.122 Sum_probs=219.3
Q ss_pred CCCCCCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+.....+||+..+ .+.++ .+.+.+.+.+....... ....|. .+....+++.+.+..
T Consensus 31 ~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~--------~~~~~~-----~~~~~~la~~l~~~~--- 94 (406)
T PRK12381 31 SRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWH--------TGNGYT-----NEPVLRLAKKLIDAT--- 94 (406)
T ss_pred CEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhccc--------ccCccC-----CHHHHHHHHHHHhhC---
Confidence 34445556778998663 33443 35555554443321000 001121 223334444444321
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhc--------CCCCeEEEcCCCCcChHHhHhhhcCcEEEE---EecCC--CCCCcC
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILA--------DPGDALLVPTPYYPGFDRDLRWRTGIKIVP---IHCDS--SNNFQI 182 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~---v~~~~--~~~~~~ 182 (442)
..+.+++++++++++..+++... .+...|+..+.+|.+....+....|..... .++.+ ..-...
T Consensus 95 ---~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (406)
T PRK12381 95 ---FADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYN 171 (406)
T ss_pred ---CCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCC
Confidence 24689999999999999988752 234679999999988764332112311000 01100 000113
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC--CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHh
Q 046900 183 TPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI--QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILE 260 (442)
Q Consensus 183 d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~--~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~ 260 (442)
|++.+++.+.+ ++++|++ +|.||+|-++ +.+.+++|.++|++||+++|+||+|..+.+.+..+ ......-
T Consensus 172 d~~~l~~~l~~------~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~~~~~v 243 (406)
T PRK12381 172 DLNSASALIDD------QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGV 243 (406)
T ss_pred CHHHHHHhccC------CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh-hhHhhCC
Confidence 78888888753 6666555 7999998765 68899999999999999999999998776655421 1111111
Q ss_pred hhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 046900 261 ARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSFTLISSQTQYLLASMLSNKKFTENYIKTNRER 338 (442)
Q Consensus 261 ~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 338 (442)
.++ +.||||++| +|+|+||+++ ++.+.+.+... ...+..+++.+.++.+.++.. . -...++.
T Consensus 244 -----~pD----i~t~sK~l~-gG~~ig~~~~-~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l---~--~~~~~~~ 307 (406)
T PRK12381 244 -----TPD----VLTTAKALG-GGFPIGAMLT-TEKCASVMTVGTHGTTYGGNPLASAVAGKVLELI---N--TPEMLNG 307 (406)
T ss_pred -----CCC----EEEehhhhh-CCCceEEEEE-cHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH---h--hccHHHH
Confidence 112 359999998 9999999999 56666665432 222456888888888876431 1 1245677
Q ss_pred HHHHHHHHHHHHHhCC--Ce--eecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEE
Q 046900 339 LQKRYQMIIEGLRSAG--IE--CLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVC 414 (442)
Q Consensus 339 ~~~~~~~l~~~L~~~g--~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls 414 (442)
++++.+++.+.|++.+ .. ......|+++|++++.... ..+..++..++++ ||.+.++ +++++|++
T Consensus 308 ~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~----~~~~~~~~~l~~~-Gv~v~~~------g~~~lRl~ 376 (406)
T PRK12381 308 VKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYA----GKAKQISQEAAKA-GVMVLIA------GPNVVRFA 376 (406)
T ss_pred HHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchh----hHHHHHHHHHHHC-CcEEeeC------CCCEEEEe
Confidence 7788888888887653 22 2223557888998765210 1245677777665 9999763 23589999
Q ss_pred eec-CCHHHHHHHHHHHHHHHHHHHhh
Q 046900 415 FAN-MSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 415 ~~~-~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
++. ++++++++++++|.+++.+..++
T Consensus 377 p~~~~t~~~i~~~~~~l~~~l~~~~~~ 403 (406)
T PRK12381 377 PALNISEEEITTGLDRFARACERFVSR 403 (406)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 873 59999999999999999887654
No 182
>PRK07505 hypothetical protein; Provisional
Probab=99.92 E-value=3.3e-22 Score=197.64 Aligned_cols=292 Identities=14% Similarity=0.145 Sum_probs=177.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc----CCCC-eEEEcCCCCcCh-H--HhHhhhcCcE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA----DPGD-ALLVPTPYYPGF-D--RDLRWRTGIK 168 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~----~~gd-~Vl~~~p~y~~~-~--~~~~~~~G~~ 168 (442)
..++++.+++++. . +.+++++++++...++..+. .+|+ .|++.+..|.+. . .... ..+.+
T Consensus 93 ~~~l~~~la~~~~--------~---~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~-~~~~~ 160 (402)
T PRK07505 93 LKDLEEALSELFG--------A---SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGIC-ADETE 160 (402)
T ss_pred HHHHHHHHHHHhC--------C---CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhh-hcCCe
Confidence 4566666666542 2 44444455667776665432 2232 355666555432 1 1222 14567
Q ss_pred EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 169 v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
++.+|. .|++.+++.+.+ +++++++++|+||||.+++ +++|.++|+++++++|+||+|+...++
T Consensus 161 v~~~~~-------~d~~~l~~~~~~------~~~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g 224 (402)
T PRK07505 161 VETIDH-------NDLDALEDICKT------NKTVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYG 224 (402)
T ss_pred EEEeCC-------CCHHHHHHHHhc------CCCEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcC
Confidence 777764 378999988764 5678999999999999999 677788888999999999999754443
Q ss_pred CCC-cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccC----CCcHHHHHHHHHHhc
Q 046900 249 SSE-FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT----LISSQTQYLLASMLS 323 (442)
Q Consensus 249 ~~~-~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~----~~s~~~q~~~~~~l~ 323 (442)
... ......+.. ..++++++++|+||++|.+| ||++++++.+.+.+......+ ..++++..++.+.++
T Consensus 225 ~~g~~~~~~~~~~----~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 225 KNGEGYVRSELDY----RLNERTIIAASLGKAFGASG---GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAE 297 (402)
T ss_pred CCCCchHHHHcCC----CCCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence 211 111111111 02578899999999999776 888765677777776544332 234455555555554
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCC
Q 046900 324 NKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSC 403 (442)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f 403 (442)
-. .++++.+.++.++++.+.+...+... ....+.++.++.++.. ..+.++.+.|+++ ||.+.++..+
T Consensus 298 ~~--~~~~~~~~~~~l~~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~------~~~~~~~~~l~~~-Gi~v~~~~~p 364 (402)
T PRK07505 298 IH--LSEELDQLQQKLQNNIALFDSLIPTE----QSGSFLPIRLIYIGDE------DTAIKAAKQLLDR-GFYTSPVFFP 364 (402)
T ss_pred HH--hccCcHHHHHHHHHHHHHHHHHHHhc----CCCCCCCEEEEEeCCH------HHHHHHHHHHHHC-CCeEeeecCC
Confidence 10 01223344455555555443333211 0112222233333221 1356788888876 9999997433
Q ss_pred CCC-CCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 404 HCS-EPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 404 ~~~-~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
... +..++||+++ ..+++++++++++|.+++.+
T Consensus 365 ~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 365 VVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 221 2368999997 34899999999999998764
No 183
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=2.7e-22 Score=195.30 Aligned_cols=292 Identities=20% Similarity=0.267 Sum_probs=211.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCccC-CCcEEEecChHHHHHHHHHhh---cCCCCeEEEcCCCCcCh----HHhHhhhcCc
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFD-LNRIVVTAGATAANELLTFIL---ADPGDALLVPTPYYPGF----DRDLRWRTGI 167 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~-~~~i~~t~G~~~ai~~~~~~l---~~~gd~Vl~~~p~y~~~----~~~~~~~~G~ 167 (442)
-+++.|+++|+|++ .+ .++|++|.|+|++++++..++ ..+||.|++..-.|+.. ....+ ..|+
T Consensus 67 ~~e~aRe~va~~~~--------a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~-~~Ga 137 (405)
T COG0520 67 LYEAAREAVARFLN--------ADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAK-RTGA 137 (405)
T ss_pred HHHHHHHHHHHHhC--------CCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHH-hcCc
Confidence 46788889999886 56 489999999999999999999 68999999999888664 33444 3799
Q ss_pred EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCC
Q 046900 168 KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAF 247 (442)
Q Consensus 168 ~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~ 247 (442)
+++.+|++++ ..+|.+.+++.+.+ +||+|.++.-+|.||.+.+ +++|+++|+++|+++++|.+++-
T Consensus 138 ~v~~i~~~~~--g~~~~~~~~~~i~~------~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~--- 203 (405)
T COG0520 138 KVRVIPLDDD--GLLDLDALEKLITP------KTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAA--- 203 (405)
T ss_pred EEEEEecCCC--CCcCHHHHHHhcCC------CceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECcccc---
Confidence 9999999853 46889999997765 8999999999999999999 88999999999999999999874
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcc-cCCCCCceeEEEeecCHHHHHHHHHccc--------------------
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSK-DLGLPGFRVGTIYSYNDKVVTTARRMSS-------------------- 306 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK-~~g~~G~RiG~i~~~~~~~~~~~~~~~~-------------------- 306 (442)
+.....+..++.+ +++.|.+| .+|..| +|.+++.+ .+.+.+.....
T Consensus 204 -~h~~idv~~l~~D---------f~afsgHKwl~gP~G--iGvLy~r~-~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p 270 (405)
T COG0520 204 -GHLPIDVQELGCD---------FLAFSGHKWLLGPTG--IGVLYVRK-ELLEELEPFLGGGGMIEYVSRDEGVTLAELP 270 (405)
T ss_pred -CccCCCchhcCCC---------EEEEcccccccCCCc--eEEEEEch-HHHhhcCCcccCCCceeeecccccccccCcc
Confidence 3234455555443 78899999 566336 79999954 44433311000
Q ss_pred --c--CCCcHHHHHHHHHHhcCchhHHHH-HHHHHHHHHHHHHHHHHHHHhC-CCeeecCC---ceEEEEEecCCccccc
Q 046900 307 --F--TLISSQTQYLLASMLSNKKFTENY-IKTNRERLQKRYQMIIEGLRSA-GIECLKGN---AGLFCWMNLSPLLEEQ 377 (442)
Q Consensus 307 --~--~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~---~g~~~~~~~~~~~~~~ 377 (442)
+ +..+......+.+.++ ++++. +..+.+..++..+++.+.|++. ++++..+. .+-.+.+.++..
T Consensus 271 ~rfe~gTpn~~~~i~l~aAl~---~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~---- 343 (405)
T COG0520 271 LRFEAGTPNIAGAIGLAAALD---YLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI---- 343 (405)
T ss_pred hhhccCCchHHHHHhHHHHHH---HHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC----
Confidence 0 1111112222223332 22222 4566777788888899999887 68887653 233555566553
Q ss_pred ChhhHHHHHHHHHHcCcEEEeCCCCCCCC------CCCEEEEEee--cCCHHHHHHHHHHHHHHHH
Q 046900 378 TREGELALWDSMLHEVKLNISPGSSCHCS------EPGWFRVCFA--NMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 378 ~~~~~~~l~~~l~~~~gi~v~pg~~f~~~------~~~~iRls~~--~~~~e~i~~~l~~l~~~l~ 435 (442)
...++...|.++ ||.++.|..+... .+..+|+|++ + ++||++++++.|+++.+
T Consensus 344 ---~~~dv~~~L~~~-gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YN-t~edid~l~~aL~~~~~ 404 (405)
T COG0520 344 ---HPHDVATLLDEK-GIAVRAGHHCAQPLHRLLGVDATIRASLHLYN-TEEDVDRLLEALKKALA 404 (405)
T ss_pred ---CHHHHHHHHHhC-CeEEEeccccccHHHHhcCCCCceEEEEeecC-CHHHHHHHHHHHHHHhh
Confidence 257788888666 8999999877531 1345999997 5 89999999999998764
No 184
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.92 E-value=1.6e-22 Score=199.97 Aligned_cols=293 Identities=17% Similarity=0.239 Sum_probs=200.6
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc----CCCCeEEEcCCCCcChHHhHhh--hcCcEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA----DPGDALLVPTPYYPGFDRDLRW--RTGIKI 169 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v 169 (442)
.+.++|+.++++++ +++++|++|+|+++++.+++.++. ++||.|+++.+.|+.+...+.. ..|+++
T Consensus 48 ~~~~~r~~la~~~g--------~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v 119 (402)
T TIGR02006 48 AVENARNQVAELIG--------ADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEV 119 (402)
T ss_pred HHHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEE
Confidence 45677888888765 578899999999999999877653 6899999999999886655421 369999
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
+.+++++ ++.+|++.+++.+.+ +++++++++|+||||.+.+ +++|.++|+++|+++++|++++...
T Consensus 120 ~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~v~~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~--- 185 (402)
T TIGR02006 120 TYLPPKS--NGLIDLEELKAAIRD------DTILVSIMHVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGK--- 185 (402)
T ss_pred EEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECCCcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCC---
Confidence 9999874 356899999998864 6789999999999999988 7788888999999999999997421
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc---------cccCCCcHHHHHHHHH
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM---------SSFTLISSQTQYLLAS 320 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~---------~~~~~~s~~~q~~~~~ 320 (442)
.+..+... +..+++.|.+|.+|.+| +|++++.++.... +... ...++.+.....++..
T Consensus 186 -~~~~~~~~---------~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~-~~~~~~g~~~~~~~~~gt~~~~~~~al~~ 252 (402)
T TIGR02006 186 -IPINVNEL---------KVDLMSISGHKIYGPKG--IGALYVRRKPRVR-LEALIHGGGHERGMRSGTLPTHQIVGMGE 252 (402)
T ss_pred -cccCcccc---------CCCEEEEehhhhcCCCc--eEEEEEccCCCCC-CCceecCCCccCCccCCCccHHHHHHHHH
Confidence 12222211 23367788999887446 7888875432221 1100 0112334444444444
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC-----ceEEEEEecCCcccccChhhHHHHHHHHHHcCc
Q 046900 321 MLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGN-----AGLFCWMNLSPLLEEQTREGELALWDSMLHEVK 394 (442)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 394 (442)
.++ ++.+.++...+++++.++++.+.|++. ++.+..+. +.+.+ .++.. +..++...+ .+
T Consensus 253 al~---~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v--~f~~~-------~~~~~~~~l---~~ 317 (402)
T TIGR02006 253 AFR---IAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNV--SFNYV-------EGESLIMAL---KD 317 (402)
T ss_pred HHH---HHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEE--EEeCc-------CHHHHHHhc---CC
Confidence 443 233446667788888899999999875 55554211 11122 22211 123444333 38
Q ss_pred EEEeCCCCCCCC-----------------CCCEEEEEeecC-CHHHHHHHHHHHHHHHHHHH
Q 046900 395 LNISPGSSCHCS-----------------EPGWFRVCFANM-SEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 395 i~v~pg~~f~~~-----------------~~~~iRls~~~~-~~e~i~~~l~~l~~~l~~~~ 438 (442)
|.+..|..+... ..+++|+|++.. +++|++++++.|+++++.++
T Consensus 318 i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 318 LAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred EEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 998888776431 137899999732 89999999999999987753
No 185
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.91 E-value=5e-22 Score=193.71 Aligned_cols=210 Identities=21% Similarity=0.291 Sum_probs=157.2
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----HhhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~~G~~v~~ 171 (442)
-..+|++++|++.+ .++.++++++++|+..++.+++++||+|+++.+.|...... +. ..|+++..
T Consensus 41 ~~~~le~~la~l~g----------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~-~~g~~~~~ 109 (369)
T cd00614 41 TVDALEKKLAALEG----------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLP-KLGIEVTF 109 (369)
T ss_pred hHHHHHHHHHHHHC----------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHh-hcCeEEEE
Confidence 46788888888764 35677888889999999999999999999999999886543 33 37888888
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++.+ |++.+++.+++ ++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|+...+.
T Consensus 110 v~~~-------d~~~l~~~i~~------~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~--- 170 (369)
T cd00614 110 VDPD-------DPEALEAAIKP------ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ--- 170 (369)
T ss_pred eCCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC---
Confidence 8743 57888888764 7899999999999999988 778889999999999999999864331
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhH
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFT 328 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~ 328 (442)
....+ +..+++.|+||.+|.+| ++.||++++++.+.+.++..... +.+++..++++...++.
T Consensus 171 --~~~~~---------g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t---- 235 (369)
T cd00614 171 --RPLEL---------GADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT---- 235 (369)
T ss_pred --Chhhh---------CCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC----
Confidence 11112 33478999999997666 88999999664666665543332 34566666655544442
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 329 ENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+....++..++...+.+.|++.
T Consensus 236 ---l~~r~~~~~~na~~la~~L~~~ 257 (369)
T cd00614 236 ---LPLRMERHSENALKVAEFLEKH 257 (369)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHcC
Confidence 2334556677888888899876
No 186
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=5.8e-22 Score=194.11 Aligned_cols=209 Identities=14% Similarity=0.218 Sum_probs=152.2
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH----hHhhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR----DLRWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~G~~v~~ 171 (442)
-...|++.+|++++ .++.++++++++++..++.+++++||+|+++.|+|..... .+. ..|+++..
T Consensus 65 ~~~~le~~lA~l~g----------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~-~~Gi~v~~ 133 (398)
T PRK08249 65 TVQAFEEKVRILEG----------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLP-RMGVDVTL 133 (398)
T ss_pred HHHHHHHHHHHHhC----------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHh-hCCeEEEE
Confidence 45788999999875 3456777777899999999999999999999999987543 344 37888877
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++. .|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++++++|+|++|+......
T Consensus 134 vd~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~-- 195 (398)
T PRK08249 134 CET-------GDHEQIEAEIAK------GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN-- 195 (398)
T ss_pred cCC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC--
Confidence 652 578999998865 7899999999999999998 6678888999999999999998644221
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhH
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFT 328 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~ 328 (442)
++ .. +.-++++|+||.+|.+|.++ ||+++ ++.+.+.++..... ..+++..++.+..-++.
T Consensus 196 --~l-~~---------~~Divv~S~sK~l~g~~~~~gG~vv~-~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t---- 258 (398)
T PRK08249 196 --PL-AL---------GADLVIHSATKFLSGHADALGGVVCG-SKELMEQVYHYREINGATMDPMSAYLILRGMKT---- 258 (398)
T ss_pred --ch-hh---------CCCEEeccCceecCCCCCceEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch----
Confidence 11 12 12267899999998677776 56665 56666665544332 34455555555444432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 329 ENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+....++..+++..+.+.|+++
T Consensus 259 ---L~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 259 ---LKLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHcC
Confidence 2334455567778888888765
No 187
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=1.1e-21 Score=192.48 Aligned_cols=209 Identities=20% Similarity=0.216 Sum_probs=151.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC----hHHhHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPG----FDRDLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~~G~~v~~v 172 (442)
...|++.+|++.+ . .+.+ +++++++++.+++.+++++||+|+++.|.|.. +...+. ..|.+++.+
T Consensus 62 ~~~Le~~lA~l~g--------~-~~~v-~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~-~~g~~v~~v 130 (405)
T PRK08776 62 RDLLGEALAELEG--------G-AGGV-ITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAK-KGHFALITA 130 (405)
T ss_pred HHHHHHHHHHHhC--------C-CceE-EEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHH-hcCcEEEEE
Confidence 4677777777654 1 3455 45555799999999999999999999999987 333344 368888887
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+. .|++.+++.+++ ++|+|++++|+||||.+.+ +++|+++|+++|++||+|++|..... +
T Consensus 131 ~~-------~d~~~l~~~i~~------~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~----~ 190 (405)
T PRK08776 131 DL-------TDPRSLADALAQ------SPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPAL----Q 190 (405)
T ss_pred CC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCccccc----C
Confidence 64 378889888764 7899999999999999966 78888999999999999999985221 1
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCC-CceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLP-GFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~-G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
.++ .+. .-+++.|++|.++.+ ++..|+++++++.+.+.+...... ..++++.+.++...++
T Consensus 191 ~pl-~~g---------aDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~------ 254 (405)
T PRK08776 191 KPL-EFG---------ADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLR------ 254 (405)
T ss_pred Ccc-ccc---------CCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhC------
Confidence 222 121 127889999999645 578899988677776655433222 2356666666554443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
++..+.++..++...+.+.|+++
T Consensus 255 -tl~~r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 255 -TLDARLRVHQENADAIAALLDGH 277 (405)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHcC
Confidence 34556667777888888888765
No 188
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.91 E-value=4.2e-22 Score=195.43 Aligned_cols=217 Identities=16% Similarity=0.220 Sum_probs=151.6
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHh---hhc
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRT 165 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~~ 165 (442)
.+|+++ -...|++++|++++ .+..+++++++.++..++.+++++||+|+++.|.|+.+...+. ...
T Consensus 60 ~r~~~p-~~~~Le~~lA~l~G----------~~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~ 128 (398)
T PRK07504 60 SRYSNP-TVDMFEKRMCALEG----------AEDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRY 128 (398)
T ss_pred ecCCCc-hHHHHHHHHHHHhC----------CCeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhc
Confidence 456554 35899999999875 2233457777888888888888999999999999997644332 136
Q ss_pred CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 166 GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 166 G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
|++++.++ .+|++.+++++++ ++|+|++++|+||||.+++ +++|.++|+++|+++|+|++|+..
T Consensus 129 G~~v~~vd-------~~d~e~l~~ai~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~ 192 (398)
T PRK07504 129 GIESTLVD-------GLDLDNWEKAVRP------NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATP 192 (398)
T ss_pred CeEEEEEC-------CCCHHHHHHhcCc------CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCcccc
Confidence 88888875 1688999998864 7899999999999999998 777888888999999999999864
Q ss_pred CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeE-EEeecCHHHHHHHHHc-ccc-CCCcHHHHHHHHHHh
Q 046900 246 AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVG-TIYSYNDKVVTTARRM-SSF-TLISSQTQYLLASML 322 (442)
Q Consensus 246 ~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG-~i~~~~~~~~~~~~~~-~~~-~~~s~~~q~~~~~~l 322 (442)
.+. ....+ +..+++.|+||.++.+|+|+| +++++++.+.+.++.. ... ..+++..++.+..-+
T Consensus 193 ~~~-----~~~~~---------gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L 258 (398)
T PRK07504 193 LFQ-----KPLEL---------GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGL 258 (398)
T ss_pred ccC-----Cchhh---------CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 431 11122 334788999999988999996 5556444444333322 212 234454444444444
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 323 SNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+. +....++..++...+.+.|+++
T Consensus 259 ~t-------l~~R~~~~~~na~~la~~L~~~ 282 (398)
T PRK07504 259 ET-------LPVRVRQQTESAAAIADFLAGH 282 (398)
T ss_pred ch-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 33 2333444456677777888765
No 189
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=7.1e-22 Score=192.10 Aligned_cols=218 Identities=17% Similarity=0.184 Sum_probs=158.7
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHh---hh
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WR 164 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~ 164 (442)
..+|+.+ ....|++++|++.+ .+++++|+|+++++.+++.+++++||+|+++.|+|......+. ..
T Consensus 47 Y~R~~np-t~~~Le~~lA~leg----------~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~ 115 (388)
T PRK08861 47 YTRSGNP-NRGLLEQTLSELES----------GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANK 115 (388)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhc
Confidence 3455554 46889999999875 5899999999999999999999999999999999986443221 12
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|++++.++. .|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++++++|+|++|..
T Consensus 116 ~gi~v~~vd~-------~d~e~l~~~i~~------~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~ 179 (388)
T PRK08861 116 GDFKVQFVDQ-------SDAAALDAALAK------KPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLT 179 (388)
T ss_pred CCeEEEEECC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccc
Confidence 5778777752 478899888764 7899999999999999999 56778888899999999999986
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC-CCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL-PGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASM 321 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~-~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~ 321 (442)
..+.. ++ .+ +--+++.|++|.++- .++..|++++.++.+.+.++..... ..+++...+.+..-
T Consensus 180 ~~~~~----pl-~~---------GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rg 245 (388)
T PRK08861 180 PVLQK----PL-EL---------GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRG 245 (388)
T ss_pred cccCC----Cc-cc---------CCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhc
Confidence 43321 11 12 223788999999863 3478899988666666555543333 33466666666665
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+++.. -+.++..++...+.+.|+++
T Consensus 246 l~Tl~-------lR~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 246 IRTLG-------ARMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred CCCHH-------HHHHHHHHHHHHHHHHHHhC
Confidence 65432 23344455667777888775
No 190
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.91 E-value=1.3e-21 Score=191.22 Aligned_cols=291 Identities=13% Similarity=0.121 Sum_probs=193.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh--------------cCCCCeEEEcCCCCcChHHhH
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL--------------ADPGDALLVPTPYYPGFDRDL 161 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l--------------~~~gd~Vl~~~p~y~~~~~~~ 161 (442)
-+.+|.+++|+|++ .+..++.+.+..+...++.+| ..++|.|+.+.-+|......+
T Consensus 148 ~h~~LE~~LA~f~g----------~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~ 217 (476)
T PLN02955 148 YHRLLESSLADLKK----------KEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGV 217 (476)
T ss_pred HHHHHHHHHHHHHC----------CCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHH
Confidence 34678889999875 566777787788888887776 246678888888999988888
Q ss_pred hhhc----CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCcCCCHHHHHHHHHHHHhcCcEE
Q 046900 162 RWRT----GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNP-SNPLGATIQRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 162 ~~~~----G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~~~~~~l~~l~~~~~~~~~~v 236 (442)
+. . +++++.++. -|++.|++.+++.. .+.+ ++++.+ .+++|.+.+ +.+|.++|++||+++
T Consensus 218 ~l-s~~~~~a~~~~f~H-------ND~~~Le~~L~~~~---~~~~-~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~L 282 (476)
T PLN02955 218 RL-AERQGNVEVFVYRH-------CDMYHLNSLLSSCK---MKRK-VVVTDSLFSMDGDFAP---MEELSQLRKKYGFLL 282 (476)
T ss_pred Hh-ccccCCceEEEeCC-------CCHHHHHHHHHhCC---CCce-EEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEE
Confidence 75 4 577777764 37899999997642 1233 455555 789999999 777778888999999
Q ss_pred EEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc---CCCcH-
Q 046900 237 VSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF---TLISS- 312 (442)
Q Consensus 237 i~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~---~~~s~- 312 (442)
|+||+|+.++++.. .........- ..+..|+++||||++|..| ||+++ ++.+++.++..... .+..+
T Consensus 283 iVDEAH~~Gv~G~~-G~G~~e~~g~----~~di~ii~~TLsKA~G~~G---Gfi~g-s~~~~~~l~~~~~~~ifStalpp 353 (476)
T PLN02955 283 VIDDAHGTFVCGEN-GGGVAEEFNC----EADVDLCVGTLSKAAGCHG---GFIAC-SKKWKQLIQSRGRSFIFSTAIPV 353 (476)
T ss_pred EEcccccCceecCC-CCcHHHHhCC----CCCCcEEEEeCccchhccC---ceeec-HHHHHHHHHHhCCCCeecccccH
Confidence 99999998777542 1222222110 1367789999999998776 99998 45677777654333 22222
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHc
Q 046900 313 QTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHE 392 (442)
Q Consensus 313 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 392 (442)
+...++.+.+. .+.. -...+++++++.+++.+. .|+.+ .+. .+.+.+... ..+.+++++|+++
T Consensus 354 ~~aaa~laal~---l~~~-~~~~r~~L~~n~~~fr~~---~G~~~---~sP-I~pI~ig~~------~~a~~~~~~L~~~ 416 (476)
T PLN02955 354 PMAAAAYAAVV---VARK-EKWRRKAIWERVKEFKAL---SGVDI---SSP-IISLVVGNQ------EKALKASRYLLKS 416 (476)
T ss_pred HHHHHHHHHHH---HHhc-CHHHHHHHHHHHHHHHHh---cCCCC---CCC-EEEEEeCCH------HHHHHHHHHHHHC
Confidence 22222222222 1111 123556677777766663 35543 222 333444332 2367788998877
Q ss_pred CcEEEeCCCCCCC-CCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 393 VKLNISPGSSCHC-SEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 393 ~gi~v~pg~~f~~-~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
||.+.+-..... .+...+||++. ..++++++.+++.|.+++....
T Consensus 417 -Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 417 -GFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred -CCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 999987443222 22346999996 3489999999999998876544
No 191
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.91 E-value=9.2e-22 Score=191.17 Aligned_cols=214 Identities=18% Similarity=0.156 Sum_probs=151.3
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---h
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---R 164 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~ 164 (442)
..+|+++ ....|++++|++. ..+ .++++++++++..++.+++++||+|+++.|+|..+...+.. .
T Consensus 45 y~ry~~p-~~~~Le~~lA~l~----------~~~-~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~ 112 (366)
T PRK07582 45 YGRASNP-TWRALEAALGELE----------GAE-ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAP 112 (366)
T ss_pred eECCCCc-cHHHHHHHHHHHc----------CCC-EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhc
Confidence 4557654 6799999999985 134 45555556799999999999999999999999887664421 3
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|++++.++.++.. + . +. .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..
T Consensus 113 ~G~~v~~v~~~~~~------~---~-~~------~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~ 173 (366)
T PRK07582 113 LGVTVREAPTAGMA------E---A-AL------AGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTAT 173 (366)
T ss_pred CeEEEEEECCCChH------H---H-hc------cCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCC
Confidence 79999999865311 1 1 11 27889999999999998876 88889999999999999999964
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccC-CCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDL-GLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASM 321 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~ 321 (442)
.. +. .++ ++ +.-++++|+||.+ |.+|+|+||++++++.+.+.++..... ...++.....+...
T Consensus 174 ~~--~~--~p~-~~---------g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~ 239 (366)
T PRK07582 174 PL--GQ--RPL-EL---------GADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRS 239 (366)
T ss_pred cc--cc--Cch-hc---------CCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhc
Confidence 21 21 121 12 1126789999998 456799999998666777666544333 23456666666666
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
++..+ ...++..++...+.+.|+++
T Consensus 240 l~tl~-------~R~~~~~~na~~la~~L~~~ 264 (366)
T PRK07582 240 LGTLG-------LRFARQCANALAVAELLAGH 264 (366)
T ss_pred cccHH-------HHHHHHHHHHHHHHHHHHhC
Confidence 65422 22344556777888888775
No 192
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.91 E-value=5.6e-22 Score=193.09 Aligned_cols=172 Identities=17% Similarity=0.360 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS 176 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~ 176 (442)
.++++++++++.+..+ .+++++|+|+++++.+++.++ ++|||.|+++.|+|..+...+.. .|++++.+++++
T Consensus 30 g~~~~~~e~~la~~~g------~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~~~-~G~~~v~vd~d~ 102 (376)
T TIGR02379 30 GPFSRRCETWLENRTG------TKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVL-RGAKIVFVDIRP 102 (376)
T ss_pred cHHHHHHHHHHHHHhC------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHH-cCCEEEEEecCC
Confidence 4677788887776644 578999999999999998887 89999999999999999888884 899999999986
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC-CCCCCcccH
Q 046900 177 SNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA-FSSSEFVSI 255 (442)
Q Consensus 177 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~-~~~~~~~s~ 255 (442)
+ +|.+|++.+++++++ ++|+|+ |+||+|...+ +.+|.++|+++|++||+|++|+.+. +++....
T Consensus 103 ~-~~~~d~~~le~~i~~------~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g-- 167 (376)
T TIGR02379 103 D-TMNIDETLIESAITH------RTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIEDAAQGVMSTYKGRALG-- 167 (376)
T ss_pred C-cCCCCHHHHHHhcCc------CceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEECccccCCccCCcccC--
Confidence 4 588999999998864 788775 6788999887 6688888999999999999998654 4443211
Q ss_pred HHHHhhhcCCCCCcEEEEecCc----ccCCCCCceeEEEeecCHHHHHHHHHcc
Q 046900 256 AEILEARQYKDSERVHIVYSLS----KDLGLPGFRVGTIYSYNDKVVTTARRMS 305 (442)
Q Consensus 256 ~~~~~~~~~~~~~~vi~~~S~S----K~~g~~G~RiG~i~~~~~~~~~~~~~~~ 305 (442)
.+..+++|| |.+. +|.+.|+++++++.+.+.++.+.
T Consensus 168 -------------~~~~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~ 207 (376)
T TIGR02379 168 -------------SIGHLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIR 207 (376)
T ss_pred -------------CCCCEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHH
Confidence 111234444 8885 78899999998788877766443
No 193
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.90 E-value=9.3e-22 Score=192.54 Aligned_cols=215 Identities=19% Similarity=0.262 Sum_probs=152.5
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH----HhHhhh
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD----RDLRWR 164 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~ 164 (442)
.+|+.+ -...|++++|++.+ .+..++++++++++.+++.+++++||.|+++.|.|.... ..+. .
T Consensus 54 ~r~~~p-~~~~le~~lA~l~g----------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~-~ 121 (391)
T TIGR01328 54 SRLGNP-TVSNLEGRIAFLEG----------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALT-K 121 (391)
T ss_pred eCCCCc-hHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHh-c
Confidence 445554 35789999999976 234678888889999999999999999999999887533 3334 3
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|+++..++++ |++.+++.+.+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.
T Consensus 122 ~G~~~~~vd~~-------d~e~l~~~i~~------~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~ 185 (391)
T TIGR01328 122 FGIQVDFINMA-------IPEEVKAHIKD------NTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFAT 185 (391)
T ss_pred CCeEEEEECCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCch
Confidence 79998888753 67889888865 7899999999999999998 77788888899999999999986
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHc--ccc--CCCcHHHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRM--SSF--TLISSQTQYLLA 319 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~--~~~--~~~s~~~q~~~~ 319 (442)
.... . ++ .. +..+++.|+||.+|.+|.++ |++++ ++.+.+.++.. ... ..+++...+.+.
T Consensus 186 ~~~~-~---~~-~~---------g~Divv~S~sK~lgg~g~~~gG~v~~-~~~li~~l~~~~~~~~~g~~l~~~~a~l~l 250 (391)
T TIGR01328 186 PMLT-N---PV-AL---------GVDVVVHSATKYIGGHGDVVAGLICG-KAELLQQIRMVGIKDMTGSVISPFDAWLIL 250 (391)
T ss_pred hccC-C---ch-hc---------CCCEEEccccccccCCCCceEEEEEc-CHHHHHHHHHHHHHhCCCCCCCcHHHHHHH
Confidence 4331 1 11 11 22377899999999888775 66666 56655555432 112 234444444444
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 320 SMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
..++. +....++..++...+.+.|+++
T Consensus 251 ~~L~t-------l~~r~~~~~~na~~la~~L~~~ 277 (391)
T TIGR01328 251 RGLKT-------LNIRMKRHSENAMKVAEYLKSH 277 (391)
T ss_pred hCcCc-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 43332 2334455566777778888765
No 194
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=2.2e-21 Score=189.82 Aligned_cols=212 Identities=17% Similarity=0.239 Sum_probs=150.2
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hcCcEEEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RTGIKIVP 171 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~~ 171 (442)
....+|++++|++.+. +..++++++++++.+++.+++++||+|+++.|+|+.....+.. ..|+++..
T Consensus 61 p~~~~Le~~lA~~~g~----------~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~ 130 (388)
T PRK07811 61 PTRTALEEQLAALEGG----------AYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTP 130 (388)
T ss_pred ccHHHHHHHHHHHhCC----------CceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence 4678999999999762 2234445668999999999999999999999999864433221 25777777
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++. .|++.+++.+++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.....
T Consensus 131 ~d~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~--- 191 (388)
T PRK07811 131 VDL-------SDLDAVRAAITP------RTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ--- 191 (388)
T ss_pred eCC-------CCHHHHHHhcCc------CCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC---
Confidence 653 378999988865 7899999999999998866 788888999999999999999864321
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcccc-C-CCcHHHHHHHHHHhcCchhH
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSSF-T-LISSQTQYLLASMLSNKKFT 328 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~-~-~~s~~~q~~~~~~l~~~~~~ 328 (442)
.++ .. +..+++.|+||.++.+| .+.||++++++.+.+.++..... + ..++.....+...++.
T Consensus 192 -~p~-~~---------gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t---- 256 (388)
T PRK07811 192 -QPL-AL---------GADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT---- 256 (388)
T ss_pred -Cch-hh---------CCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc----
Confidence 121 12 22378899999997554 57899998767776665544333 2 2344444444444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 329 ENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+....++..++...+.+.|+++
T Consensus 257 ---l~~R~~~~~~na~~la~~L~~~ 278 (388)
T PRK07811 257 ---LAVRMDRHSENAEAVAEFLAGH 278 (388)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhC
Confidence 2333444566777788888765
No 195
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.90 E-value=2.5e-21 Score=190.23 Aligned_cols=214 Identities=22% Similarity=0.282 Sum_probs=151.6
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH----HhHhhhc
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD----RDLRWRT 165 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~~ 165 (442)
+|+.+ -...|++++|++.+ .+..++++++++++.+++.+++++||+|+++.|.|.... ..+. ..
T Consensus 61 r~~~p-~~~~le~~lA~l~g----------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~-~~ 128 (403)
T PRK07503 61 RISNP-TLALLEQRMASLEG----------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLG-EF 128 (403)
T ss_pred CCCCc-hHHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHh-hC
Confidence 44443 46889999998875 233566677788999999999999999999999997633 2344 37
Q ss_pred CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 166 GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 166 G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
|+++..++.+ |++.+++.+++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|+..
T Consensus 129 G~~v~~vd~~-------d~~~l~~~i~~------~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~ 192 (403)
T PRK07503 129 GVTVRHVDLT-------DPAALKAAISD------KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTP 192 (403)
T ss_pred CEEEEEeCCC-------CHHHHHHhcCc------cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 9998888753 68899988865 7899999999999999988 778888888999999999999864
Q ss_pred CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHc--ccc--CCCcHHHHHHHHH
Q 046900 246 AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRM--SSF--TLISSQTQYLLAS 320 (442)
Q Consensus 246 ~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~--~~~--~~~s~~~q~~~~~ 320 (442)
.. .. ++ .+ +..++++|+||.+|.+| +|.||++. ++.+.+.++.. ... ..++++.++.+..
T Consensus 193 ~~-~~---~l-~~---------g~Di~v~S~tK~l~g~gd~~gG~v~~-~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~ 257 (403)
T PRK07503 193 YL-QR---PL-EL---------GADLVVHSATKYLGGHGDITAGLVVG-GKALADRIRLEGLKDMTGAVMSPFDAFLLMR 257 (403)
T ss_pred cc-CC---ch-hh---------CCCEEEccccccccCCCceeEEEEEc-CHHHHHHHHhhhHHhCcCCCCCHHHHHHHHc
Confidence 32 21 22 12 22378899999998665 78899886 56666555422 221 3456666655555
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 321 MLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
.++. +....++..++...+.+.|+++
T Consensus 258 ~L~t-------l~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 258 GLKT-------LALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred Ccch-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 4442 2222233345666777777765
No 196
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.90 E-value=1e-21 Score=192.76 Aligned_cols=216 Identities=16% Similarity=0.217 Sum_probs=156.6
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC----hHHhHhhh
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPG----FDRDLRWR 164 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~ 164 (442)
.+|+.+ ...+|++++|++.+ .++.+++++++.++..++.+++++||+|+++...|.+ +...++ .
T Consensus 65 ~r~~~p-~~~~le~~lA~l~g----------~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~-~ 132 (403)
T PRK07810 65 SRYGNP-TVSMFEERLRLIEG----------AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILP-R 132 (403)
T ss_pred eCCCCc-hHHHHHHHHHHHhC----------CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHH-H
Confidence 456655 36789999999875 4477888888899999998999999999998866644 344455 3
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|++++.++. .|++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++++++|+|++|+.
T Consensus 133 ~G~~v~~vd~-------~d~~~l~~ai~~------~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~ 196 (403)
T PRK07810 133 WGVETVFVDG-------EDLSQWEEALSV------PTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFAT 196 (403)
T ss_pred cCcEEEEECC-------CCHHHHHHhcCc------CceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCc
Confidence 7999998863 378999998875 7899999999999999987 78888889999999999999986
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHc-ccc-CCCcHHHHHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRM-SSF-TLISSQTQYLLASM 321 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~-~~~-~~~s~~~q~~~~~~ 321 (442)
..+.. ++ .+ +..+++.|++|.++..|.++ |+++++++.+.+.++.. ... ..+++..++++...
T Consensus 197 ~~~~~----~~-~~---------gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~ 262 (403)
T PRK07810 197 PLLQR----GL-PL---------GADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKG 262 (403)
T ss_pred cccCC----hh-hc---------CCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhc
Confidence 44321 11 11 23478899999998788887 88887555444434432 222 34677777766666
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
|+. +....++..++...+.+.|+++
T Consensus 263 L~t-------l~~R~~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 263 LET-------LALRVRHSNASALRIAEFLEGH 287 (403)
T ss_pred cCc-------HHHHHHHHHHHHHHHHHHHhcC
Confidence 554 2333444455566677778765
No 197
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.90 E-value=8.2e-22 Score=194.98 Aligned_cols=272 Identities=16% Similarity=0.168 Sum_probs=182.6
Q ss_pred CCcEEEecChHHHHHHHHHhhcC---------CC-CeEEEcCCCCcChHHhHhhhcCc-------------EEEEEecCC
Q 046900 120 LNRIVVTAGATAANELLTFILAD---------PG-DALLVPTPYYPGFDRDLRWRTGI-------------KIVPIHCDS 176 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~~G~-------------~v~~v~~~~ 176 (442)
.+.+++++++++|+..+++++.. +| +.|++..-+|.+....+. ..+. .+..++.
T Consensus 98 ~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-- 174 (401)
T PRK00854 98 SHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIV-GFSTDPDARGGFGPFTPGFRVVPF-- 174 (401)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHH-hccCCccccccCCCCCCCeEEeCC--
Confidence 46899999999999999988842 23 577777777766433222 1111 2222221
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHH-HHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccH
Q 046900 177 SNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRS-VLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSI 255 (442)
Q Consensus 177 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~-~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~ 255 (442)
.|++.|++.+.+ ++++|++++|+||+|.+++.+ .+++|.++|++||+++|+||+|..+.+.+.. +
T Consensus 175 -----~d~~~le~~i~~------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~---~ 240 (401)
T PRK00854 175 -----GDAEALEAAITP------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKL---L 240 (401)
T ss_pred -----CCHHHHHHHhCC------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchH---h
Confidence 378999988854 789999999999999999755 5999999999999999999999875544421 1
Q ss_pred HHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHHHhcCchhHHHHH
Q 046900 256 AEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLASMLSNKKFTENYI 332 (442)
Q Consensus 256 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~ 332 (442)
..... + ..++ ++ .+||.++ .| +|+||+++ ++.+.+.+.... ..+..+++.+.++.+.|+.. ++
T Consensus 241 -~~~~~-g-~~~D-~~---~~~K~l~-gg~~~ig~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l---~~-- 306 (401)
T PRK00854 241 -AEEHE-G-IEAD-VT---LIGKALS-GGFYPVSAVLS-NSEVLGVLKPGQHGSTFGGNPLACAVARAALKVL---TE-- 306 (401)
T ss_pred -HHhhc-C-CCCC-EE---Eeccccc-CCccCeEEEEE-cHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHH---HH--
Confidence 11100 0 0123 22 2479997 55 79999999 455555554322 22446788888888877532 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCee---ecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCC
Q 046900 333 KTNRERLQKRYQMIIEGLRSAGIEC---LKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPG 409 (442)
Q Consensus 333 ~~~~~~~~~~~~~l~~~L~~~g~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~ 409 (442)
....+.++++.+++.+.|++.+... ..+.|.++.+...++. ....++++.|+++ ||.+.+. ..+
T Consensus 307 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~~~~~~------~~~~~~~~~L~~~-GV~v~~~------~~~ 373 (401)
T PRK00854 307 EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVELEPEA------GGARQYCEALKER-GLLAKDT------HDH 373 (401)
T ss_pred cCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEEEecCc------hhHHHHHHHHHHC-CeEEecC------CCC
Confidence 2245777788888888888764332 2344554444222321 1356888888876 9999752 236
Q ss_pred EEEEEee-cCCHHHHHHHHHHHHHHHH
Q 046900 410 WFRVCFA-NMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 410 ~iRls~~-~~~~e~i~~~l~~l~~~l~ 435 (442)
++|+++. ..+++++++++++|++++.
T Consensus 374 ~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 374 TIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred EEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 8999974 3489999999999998763
No 198
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=7.3e-24 Score=177.36 Aligned_cols=145 Identities=60% Similarity=1.046 Sum_probs=125.5
Q ss_pred cccchhhhhcccCCCCcchhhhhhhhcCCCCCCCCCCceeeeecccccccHHHHHHHHHhCCCCcccC-CC-CCCCCccc
Q 046900 12 VGLSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLEQQPEASTWG-KG-APGFRENA 89 (442)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 89 (442)
..+|+++....||++++++.+|+.|.+++|++.+||.|+|+|+++||.++.+.+..++.+.+....+. ++ ...+.+..
T Consensus 7 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~a 86 (153)
T PLN02994 7 QLLSKLALADKHGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDIA 86 (153)
T ss_pred hhhhhhcccccCCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999999999999999999998865322211 11 11122335
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPG 156 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~ 156 (442)
.|+++.|.++||+++|+|+.++++..+.+++++|++|+|+++++..++.+|+++||.|++++|+|+.
T Consensus 87 ~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 87 LFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 6999999999999999999998875566889999999999999999999999999999999999974
No 199
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.90 E-value=1.6e-22 Score=196.77 Aligned_cols=281 Identities=16% Similarity=0.184 Sum_probs=191.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC----CC-CeEEEcCCCCcChHHh---HhhhcCcE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD----PG-DALLVPTPYYPGFDRD---LRWRTGIK 168 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~----~g-d~Vl~~~p~y~~~~~~---~~~~~G~~ 168 (442)
+.++|+.++++++ +++++|++|+|+++++..++.++.. +| +.|++....|+.+... ++ ..|++
T Consensus 44 ~~~~r~~la~~~g--------~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~-~~G~~ 114 (353)
T TIGR03235 44 VERARKQVAEALG--------ADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALE-RNGFT 114 (353)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHH-hcCCE
Confidence 4577777777765 6788999999999999999888753 55 7888887777765443 34 37999
Q ss_pred EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 169 v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
++.++.++ ++.+|++.+++.+++ +++++++++|+||||.+++ +++|.++|+++|+++|+|++++....
T Consensus 115 v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~~g~~- 182 (353)
T TIGR03235 115 VTYLPVDE--SGRIDVDELADAIRP------DTLLVSIMHVNNETGSIQP---IREIAEVLEAHEAFFHVDAAQVVGKI- 182 (353)
T ss_pred EEEEccCC--CCcCCHHHHHHhCCC------CCEEEEEEcccCCceeccC---HHHHHHHHHHcCCEEEEEchhhcCCc-
Confidence 99999875 356899999998854 6789999999999999998 78888889999999999999873221
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHH-HHHc---------cccCCCcHHHHHHH
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTT-ARRM---------SSFTLISSQTQYLL 318 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~-~~~~---------~~~~~~s~~~q~~~ 318 (442)
...+.. .+..+++.|.+|.+|.+| +|++++.++.+... ++.. ...+..+.....++
T Consensus 183 ---~~~~~~---------~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al 248 (353)
T TIGR03235 183 ---TVDLSA---------DRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGM 248 (353)
T ss_pred ---cccccc---------cCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHH
Confidence 112111 123366789999887556 79998855422110 1110 01223334444444
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc---eEEEEEecCCcccccChhhHHHHHHHHHHcCcE
Q 046900 319 ASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA---GLFCWMNLSPLLEEQTREGELALWDSMLHEVKL 395 (442)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi 395 (442)
.+.++ +..+..+..++++++.++++.+.|++.|+++..++. .-.+.+.++.. +..++...| ++ +|
T Consensus 249 ~~al~---~~~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~~-------~~~~v~~~L-~~-~i 316 (353)
T TIGR03235 249 GEAAE---IARRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSIDGV-------NSEALIVNL-RA-DA 316 (353)
T ss_pred HHHHH---HHHhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeCCc-------CHHHHHHHH-hC-Ce
Confidence 44444 223345677888999999999999888888764322 11333333421 245666666 66 99
Q ss_pred EEeCCCCCCCCC--CCEEEEEeecCCHHHHHH
Q 046900 396 NISPGSSCHCSE--PGWFRVCFANMSEQTLEV 425 (442)
Q Consensus 396 ~v~pg~~f~~~~--~~~iRls~~~~~~e~i~~ 425 (442)
.+.+|..|.... +.++|.+++. +++++..
T Consensus 317 ~v~~g~~~~~~~~~~~~~l~~~g~-~~~~~~~ 347 (353)
T TIGR03235 317 AVSTGSACSSSKYEPSHVLQAMGL-DTDRARG 347 (353)
T ss_pred EEEchhhcCCCCCCCCHHHHHcCC-CHHHhCc
Confidence 999999986543 3468888876 5554443
No 200
>PLN00144 acetylornithine transaminase
Probab=99.90 E-value=1.2e-21 Score=191.36 Aligned_cols=295 Identities=15% Similarity=0.095 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc---CC------------CCeEEEcCCCCcChHHhHhh
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA---DP------------GDALLVPTPYYPGFDRDLRW 163 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~---~~------------gd~Vl~~~p~y~~~~~~~~~ 163 (442)
+....+|+.+.+. ...+.|+++++++++++.+++... .. ..+|+...-+|.+....+..
T Consensus 57 ~~~~~la~~l~~~------~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s 130 (382)
T PLN00144 57 IPQVELAKRLVAS------SFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALA 130 (382)
T ss_pred HHHHHHHHHHHhc------CCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHh
Confidence 4445666666542 124689999999999999887542 10 24688888888776543321
Q ss_pred hcCcEEE---EEecCCCC---CCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHH--HHHHHHHHHhcCcE
Q 046900 164 RTGIKIV---PIHCDSSN---NFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSV--LEELLDFATRKNIH 235 (442)
Q Consensus 164 ~~G~~v~---~v~~~~~~---~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~--l~~l~~~~~~~~~~ 235 (442)
..+-... ..|..... .| .|++.+++.+.. .+++++++..-+|| |.+++.+. +++|.++|++||++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~-----~~~aavi~eP~q~~-gg~~~~~~~~~~~l~~l~~~~g~l 203 (382)
T PLN00144 131 LTSKEQYRTPFEPLMPGVTFVEY-GNLEAARKLIQK-----GKTAAVFVEPVQGE-GGIYPATKEFLQGLRALCDEAGAL 203 (382)
T ss_pred cCCCccccccCCCCCCCeEEeCC-CCHHHHHHhcCC-----CCeEEEEEccccCC-CCCccCCHHHHHHHHHHHHHcCCE
Confidence 1221100 00100000 01 268888887742 25666665533788 55555444 99999999999999
Q ss_pred EEEeccCCcCCCCCCCccc-HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcH
Q 046900 236 LVSDEIYSGSAFSSSEFVS-IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISS 312 (442)
Q Consensus 236 vi~De~y~~~~~~~~~~~s-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~ 312 (442)
+|+||+|..+...+..+.. ...+. ++ +.||||.++ +|+|+||+++ ++.+.+.+.. ....+..++
T Consensus 204 lI~DEv~tg~gr~g~~~~~~~~~~~-------PD----i~t~sK~l~-~G~pig~v~~-~~~~~~~~~~~~~~~T~~~~p 270 (382)
T PLN00144 204 LVFDEVQCGLGRTGYLWAHEAYGVE-------PD----IMTLAKPLA-GGLPIGAVLV-TEKVASAINPGDHGSTFAGGP 270 (382)
T ss_pred EEEechhhCCCccchHhhhhhcCCC-------CC----EEEeccccc-CCcceEEEEE-cHHHHhccCCCCCCCCCCCCH
Confidence 9999999987665542211 11221 23 678999998 9999999999 4566665542 223356788
Q ss_pred HHHHHHH---HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHH
Q 046900 313 QTQYLLA---SMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSM 389 (442)
Q Consensus 313 ~~q~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l 389 (442)
+++.++. .+++++++ .++++.+.+.+ ++.+.+.+.+++........|+++|+++.. ....++..+
T Consensus 271 l~~aaa~a~l~~i~~~~~-~~~~~~~g~~l---~~~l~~~~~~~~~~~~vrg~G~~~~l~l~~--------~~~~~~~~~ 338 (382)
T PLN00144 271 LVCNAALAVLDKISKPGF-LASVAKKGEYL---RELLRRKLGGNPHVKEVRGVGLLVGIQLDV--------PAGPLVDAC 338 (382)
T ss_pred HHHHHHHHHHHHHhhchH-HHHHHHHHHHH---HHHHHHHHhhCCCceeeecCceEEEEEecC--------ccHHHHHHH
Confidence 8888888 55555443 45555565555 344445555543211222388999999832 135677887
Q ss_pred HHcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHH
Q 046900 390 LHEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 390 ~~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~ 437 (442)
+++ ||.+.|+.. ...+|++++. ++++++++++++|.+++.+.
T Consensus 339 ~~~-Gv~i~~~~~-----~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 339 RDS-GLLVLTAGK-----GDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred HHC-CeEEeecCC-----CCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 766 999998621 3689999985 68999999999999998753
No 201
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=2.3e-21 Score=189.76 Aligned_cols=291 Identities=14% Similarity=0.126 Sum_probs=188.1
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH----hHhhh
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR----DLRWR 164 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~ 164 (442)
.+|+++ ...+|++++|++.+ .+++++++|+++++.+++.+++++||+|+++.|+|..+.. .+. .
T Consensus 60 ~r~~~p-t~~~Le~~lA~l~g----------~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~-~ 127 (394)
T PRK07050 60 GLHATP-TSLALAQRLAEIEG----------GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLAR-D 127 (394)
T ss_pred CCCCCH-HHHHHHHHHHHHhC----------CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHH-h
Confidence 445443 35778888887754 5689999999999999999999999999999999998664 344 3
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|++++.++.. +.+.+++.+++ ++|+|++++|+||+|.+ .++++|+++|+++++++|+|++|..
T Consensus 128 ~Gi~v~~vd~~-------~~~~l~~~i~~------~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~ 191 (394)
T PRK07050 128 FGITVRFYDPL-------IGAGIADLIQP------NTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSA 191 (394)
T ss_pred cCeEEEEECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCccc
Confidence 79998887632 34678877754 78999999999999754 5699999999999999999999975
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASM 321 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~ 321 (442)
..+ ..+ +. .+..+++.|+||.++ ..+.+.|++++.++.+.+.++..... ..+++.....+...
T Consensus 192 ~~~----~~~---l~-------~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~ 257 (394)
T PRK07050 192 GLA----FKP---FE-------HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRG 257 (394)
T ss_pred ccc----cCH---HH-------cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 221 111 11 133588999999985 34456899888677776666544432 34455554444443
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eec-----------------CCceEEEEEecCCcccccChhhH
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIE-CLK-----------------GNAGLFCWMNLSPLLEEQTREGE 382 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~-----------------~~~g~~~~~~~~~~~~~~~~~~~ 382 (442)
+++ +..+.++..++...+.+.|+++ ++. +.. ..++ .+.+.+.... ..++.
T Consensus 258 l~t-------l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~-~~s~~l~~~~---~~~~~ 326 (394)
T PRK07050 258 LPS-------LQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGG-LFSVVFDERY---SPAQV 326 (394)
T ss_pred CCc-------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCce-EEEEEECCCC---CHHHH
Confidence 433 2223344445555677777765 222 110 1233 3334443311 11245
Q ss_pred HHHHHHHHHcCcEEEeCCCCCCC---------------CCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 383 LALWDSMLHEVKLNISPGSSCHC---------------SEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 383 ~~l~~~l~~~~gi~v~pg~~f~~---------------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
.++.+.| +..++.+.-|..... ...+.||||++- |+.+.+++.|.+++..
T Consensus 327 ~~~~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl---E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 327 DAFVEAL-ELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL---EDEADLIADLEQALEA 391 (394)
T ss_pred HHHHHcC-CCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc---CCHHHHHHHHHHHHHH
Confidence 5666665 333544443332210 112679999996 3456666666666654
No 202
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.90 E-value=4.6e-21 Score=189.68 Aligned_cols=286 Identities=14% Similarity=0.121 Sum_probs=179.7
Q ss_pred CCcEEEecChHHHHHHHHHhhc----------CCCCeEEEcCCCCcChHHhHhhhcCcEEEE---EecCCCC--CCcCCH
Q 046900 120 LNRIVVTAGATAANELLTFILA----------DPGDALLVPTPYYPGFDRDLRWRTGIKIVP---IHCDSSN--NFQITP 184 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~----------~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~---v~~~~~~--~~~~d~ 184 (442)
.+.+++++++++++..+++.+. ..++.|++.+-+|.+.........+..... .+....- -...|+
T Consensus 88 ~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 167 (400)
T PTZ00125 88 YDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDV 167 (400)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCH
Confidence 3689999999999999988763 134678888888776543322112211100 0100000 001378
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCH-HHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhc
Q 046900 185 QALEAAYKEAESKDMRVRGVLITNPSNPLGATIQR-SVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQ 263 (442)
Q Consensus 185 ~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~-~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~ 263 (442)
+.|++.++. .++++|++..++||||.+++. +.+++|.++|++||+++|+||+|..+.+.+..+ . .....
T Consensus 168 ~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~-~-~~~~~--- 237 (400)
T PTZ00125 168 EALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL-A-HDHEG--- 237 (400)
T ss_pred HHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-H-HHhcC---
Confidence 999998852 268888888889999999975 459999999999999999999998765545321 1 11110
Q ss_pred CCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q 046900 264 YKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQK 341 (442)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 341 (442)
.... +.++||.++.+++|+||+++ ++.+.+.+... ...+..+++.|.++.+.++... +. ...+..++
T Consensus 238 --~~pd---~~~~sK~l~~g~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~--~~---~~~~~~~~ 306 (400)
T PTZ00125 238 --VKPD---IVLLGKALSGGLYPISAVLA-NDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLK--EE---KLAENAQR 306 (400)
T ss_pred --CCCC---EEEEcccccCCCcCcEEEEE-cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH--hc---CHHHHHHH
Confidence 0112 23578999843359999999 45566555432 2234567788887766554211 00 11222333
Q ss_pred HHHHHHHHHHh----CCCe-eecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee
Q 046900 342 RYQMIIEGLRS----AGIE-CLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA 416 (442)
Q Consensus 342 ~~~~l~~~L~~----~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~ 416 (442)
+.+++.+.|++ .++. ...+ .|.++|+.++.... ..+.++++.|+++ ||.+.|+ ..+++||++.
T Consensus 307 ~~~~l~~~l~~l~~~~~~~~~~~~-~g~~~~v~~~~~~~----~~~~~~~~~l~~~-Gv~v~~~------~~~~lRi~~~ 374 (400)
T PTZ00125 307 LGEVFRDGLKELLKKSPWVKEIRG-KGLLNAIVFDHSDG----VNAWDLCLKLKEN-GLLAKPT------HDNIIRFAPP 374 (400)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEec-ccEEEEEEEccCcc----hHHHHHHHHHHHC-CeEEeec------CCCEEEEECC
Confidence 33444444433 2322 2333 56788887764110 1356788888766 9999885 2468999974
Q ss_pred -cCCHHHHHHHHHHHHHHHHHHH
Q 046900 417 -NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 417 -~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
..+++++++++++|.+++.++.
T Consensus 375 ~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 375 LVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHh
Confidence 3489999999999999998764
No 203
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.89 E-value=1.3e-20 Score=184.23 Aligned_cols=294 Identities=15% Similarity=0.176 Sum_probs=179.9
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
.-+.++|+.+|++++ . ++.+++++|. .++..+...+.++||.|++..-.|......++. .....+.++
T Consensus 56 ~~~~~~e~~la~~~~--------~-~~~l~~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~-~~~~~~~~~- 123 (370)
T PRK05937 56 SLLDDLEHKIAHFHG--------A-PEAFIVPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSV-ISGWHQSFR- 123 (370)
T ss_pred HHHHHHHHHHHHHhC--------C-CeEEEECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHH-cCCceEEec-
Confidence 346788888888876 2 2346666665 555566666777888888888888877777764 433333443
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s 254 (442)
..|+++|++.+++....+.++++|++++++|+||.+.| +++|.++|+++++++++||+|+...++.. ...
T Consensus 124 ------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~-g~g 193 (370)
T PRK05937 124 ------HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDD-GKG 193 (370)
T ss_pred ------CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC-CCc
Confidence 25889999999754322224556778899999999999 77888889899999999999986444321 111
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHH-Hcccc---CCCcHHHHHHHHHHhcCchhHHH
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR-RMSSF---TLISSQTQYLLASMLSNKKFTEN 330 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~-~~~~~---~~~s~~~q~~~~~~l~~~~~~~~ 330 (442)
...... . .+..+.+.||||.+|..|. .+++. +.+...+. ..... ...+++...++.+.++ ++.+
T Consensus 194 ~~~~~~---~--~~~~~~~~tlsK~~g~~G~---~vl~~-~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~---~l~~ 261 (370)
T PRK05937 194 FCHSLG---Y--ENFYAVLVTYSKALGSMGA---ALLSS-SEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYD---FLSQ 261 (370)
T ss_pred hHHhhC---C--CCCcEEEEechhhhhcCce---EEEcC-HHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHH---HHHh
Confidence 111110 0 1223568999999997673 34443 33333333 21111 2344554444434333 2221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCE
Q 046900 331 YIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGW 410 (442)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~ 410 (442)
.....++++++.++++.+.|...+. + ....+.++.. ...++.+.|.++ ||.+... +. ...++
T Consensus 262 ~~~~~~~~l~~l~~~l~~~l~~~~~------~-~~~~i~~~~~-------~~~~~~~~L~~~-gi~v~~~--~~-~~~~~ 323 (370)
T PRK05937 262 EGELARKQLFRLKEYFAQKFSSAAP------G-CVQPIFLPGI-------SEQELYSKLVET-GIRVGVV--CF-PTGPF 323 (370)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCC------C-CEEEEEeCCh-------hHHHHHHHHHHC-CeeEEee--CC-CCCCE
Confidence 1233456677777777777653211 1 1111233321 245666666555 9988642 11 23468
Q ss_pred EEEEee-cCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 411 FRVCFA-NMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 411 iRls~~-~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
+|+|+. ..++++++++++.|.+++++..++
T Consensus 324 iRis~~~~~t~edid~l~~~L~~~~~~~~~~ 354 (370)
T PRK05937 324 LRVNLHAFNTEDEVDILVSVLATYLEKYQKN 354 (370)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 999997 228999999999999998876554
No 204
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.89 E-value=5.1e-21 Score=187.06 Aligned_cols=215 Identities=20% Similarity=0.294 Sum_probs=153.8
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH----HhHhhh
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD----RDLRWR 164 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~ 164 (442)
.+|+.+ -..+|++.++++++ .+++++++++++++..++.+++++||+|+++.+.|.... ..+. .
T Consensus 49 ~r~~~p-~~~~le~~la~l~g----------~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~-~ 116 (380)
T TIGR01325 49 SRYANP-TVAAFEERIAALEG----------AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILP-R 116 (380)
T ss_pred ecCCCc-hHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHH-H
Confidence 345543 36888999998864 356888999999999999999999999999999887632 3345 3
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|+++..++.+ |++.+++.+.+ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+.
T Consensus 117 ~g~~v~~v~~~-------d~~~l~~~i~~------~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~ 180 (380)
T TIGR01325 117 FGIEVSFVDPT-------DLNAWEAAVKP------NTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFAT 180 (380)
T ss_pred hCCEEEEECCC-------CHHHHHHhcCC------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 89999888753 67888887754 7899999999999999987 77888888999999999999986
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHccc-c-CCCcHHHHHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRMSS-F-TLISSQTQYLLASM 321 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~~~-~-~~~s~~~q~~~~~~ 321 (442)
..+.. ++ .+ +..+++.|+||.++.+|.++ |++++ ++.+.+.++.... . ..+++.... .+
T Consensus 181 ~~~~~----pl-~~---------g~Divv~S~sK~l~g~g~~~gG~vv~-~~~~~~~l~~~~~~~g~~~~p~~a~---~~ 242 (380)
T TIGR01325 181 PVLQQ----PL-KL---------GADVVVYSATKHIDGQGRVMGGVIAG-SEELMAEVAVYLRHTGPAMSPFNAW---VL 242 (380)
T ss_pred cccCC----ch-hh---------CCCEEEeeccceecCCCCeEEEEEEe-CHHHHHHHHHHHHhhCCCCCHHHHH---HH
Confidence 43211 11 22 23477889999998788877 67776 4555555543322 2 223444333 33
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+...+. +....++..+++..+.+.|+++
T Consensus 243 l~~l~t----l~~r~~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 243 LKGLET----LSLRMQKQFDSALAIAEWLQAQ 270 (380)
T ss_pred HhccCc----HHHHHHHHHHHHHHHHHHHHcC
Confidence 333222 3344556677788888888876
No 205
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.89 E-value=3.1e-21 Score=181.08 Aligned_cols=300 Identities=17% Similarity=0.213 Sum_probs=214.8
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHh--hcC----CCCeEEEcCCCCcChHHhHhhh--cCc
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFI--LAD----PGDALLVPTPYYPGFDRDLRWR--TGI 167 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~--l~~----~gd~Vl~~~p~y~~~~~~~~~~--~G~ 167 (442)
..++-|+.||+.++ +++++|++|+|+||+.++++.. ... .|.+|+++.-.|+...+.++.. .|+
T Consensus 45 ~ve~AR~~iA~llg--------a~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~ 116 (386)
T COG1104 45 AVEEAREQIAKLLG--------ADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGF 116 (386)
T ss_pred HHHHHHHHHHHHhC--------CCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCC
Confidence 45677888888876 7889999999999999998876 222 4789999999999998888741 399
Q ss_pred EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCC
Q 046900 168 KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAF 247 (442)
Q Consensus 168 ~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~ 247 (442)
+|.++|++.+| .+|+++|+++|++ ++.+|.+..-||-||.+.| +++|.++|+++++++.+|-+.+-
T Consensus 117 ~Vtyl~V~~~G--~v~~e~L~~al~~------~T~LVSim~aNnE~G~IQp---I~ei~~i~k~~~i~fHvDAvQa~--- 182 (386)
T COG1104 117 EVTYLPVDSNG--LVDLEQLEEALRP------DTILVSIMHANNETGTIQP---IAEIGEICKERGILFHVDAVQAV--- 182 (386)
T ss_pred eEEEeCCCCCC--eEcHHHHHHhcCC------CceEEEEEecccCeeeccc---HHHHHHHHHHcCCeEEEehhhhc---
Confidence 99999999865 5899999999986 7888888899999999999 88888999999999999999883
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHH-HH-----HHccccCCCcHHHHHHHHHH
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVT-TA-----RRMSSFTLISSQTQYLLASM 321 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~-~~-----~~~~~~~~~s~~~q~~~~~~ 321 (442)
|+-+..+..+.- .+..-|-+|..|..| +|.++..+..-.. .+ ++-...++.+.+...++..+
T Consensus 183 -Gkipi~~~~~~v---------D~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A 250 (386)
T COG1104 183 -GKIPIDLEELGV---------DLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKA 250 (386)
T ss_pred -CceeccccccCc---------ceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHH
Confidence 443334333222 245568899999888 6888863321111 11 11122244455555555554
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeecC---CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEE
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA--GIECLKG---NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLN 396 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~ 396 (442)
++. ..+.+.....++...|+.+.+.|.+. ++.+... .-...+.+.++.. ..+.+... ++.+||.
T Consensus 251 ~~~---a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv-------~gE~ll~~-L~~~gI~ 319 (386)
T COG1104 251 AEI---AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGV-------EGESLLLA-LDLAGIA 319 (386)
T ss_pred HHH---HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCC-------cHHHHHHh-ccccCeE
Confidence 442 23345667778888899999999875 3333322 1223444455543 13444444 4667999
Q ss_pred EeCCCCCCCC-----------------CCCEEEEEeecC-CHHHHHHHHHHHHHHHHHHHhh
Q 046900 397 ISPGSSCHCS-----------------EPGWFRVCFANM-SEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 397 v~pg~~f~~~-----------------~~~~iRls~~~~-~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
+..|+.|... ..+.+|+|++.. ++++++.+++.|.+++++++..
T Consensus 320 vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~ 381 (386)
T COG1104 320 VSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLREL 381 (386)
T ss_pred EeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 9999998652 125799999832 8999999999999999988753
No 206
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=8.1e-21 Score=185.37 Aligned_cols=211 Identities=21% Similarity=0.225 Sum_probs=150.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEe
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIH 173 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~ 173 (442)
...+|++++|++++ .+++++++|+++++..++.+++++||+|+++.|.|..+...+.. ..|+++..++
T Consensus 54 ~~~~lE~~lA~l~g----------~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~ 123 (385)
T PRK08574 54 TLRPLEEALAKLEG----------GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY 123 (385)
T ss_pred cHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC
Confidence 56899999999975 45788899999999999999999999999999999987765531 2577776653
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
+|++.+++.+++ .++++|++++|+||||.+++ +++|+++|+++|++||+|++|+.... ..
T Consensus 124 --------~d~~~l~~~i~~-----~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~----~~ 183 (385)
T PRK08574 124 --------PSTEDIIEAIKE-----GRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL----YR 183 (385)
T ss_pred --------CCHHHHHHhcCc-----cCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----CC
Confidence 467888888753 26889999999999999999 67888999999999999999974221 11
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCce-eEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFR-VGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTEN 330 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R-iG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~ 330 (442)
++ .. +..+++.|+||.++.+|-. .|++++.++.+.+.++..... ..+++...+.+..-++.
T Consensus 184 ~l-~~---------GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t------ 247 (385)
T PRK08574 184 PL-RH---------GADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT------ 247 (385)
T ss_pred hh-hh---------CCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc------
Confidence 21 11 3348899999999756655 476777566666665543332 23445444444443432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Q 046900 331 YIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+....++..++...+.+.|+++
T Consensus 248 -L~~R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 248 -LEVRFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred -HHHHHHHHHHHHHHHHHHHHcC
Confidence 2233344445667777777765
No 207
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.89 E-value=3.7e-21 Score=186.17 Aligned_cols=286 Identities=16% Similarity=0.208 Sum_probs=188.9
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhh--c-
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWR--T- 165 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~--~- 165 (442)
.+|+.+ ...+|++++|++.+ .+++++++|+++|+.+++. ++++||+|+++.+.|..-...+... .
T Consensus 49 ~R~~~p-~~~~le~~lA~leg----------~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~ 116 (364)
T PRK07269 49 TRTKNP-TRAKLEETLAAIES----------ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG 116 (364)
T ss_pred eCCCCc-cHHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC
Confidence 445544 46899999999974 6789999999999999984 5699999999999998755443321 1
Q ss_pred CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 166 GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 166 G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
+.+ + .|..|++.+++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|...
T Consensus 117 ~~~---~------~~~~d~~~l~~~i~~------~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~ 178 (364)
T PRK07269 117 RFH---F------TYANTEEELIAAIEE------DTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSP 178 (364)
T ss_pred cEE---E------EecCCHHHHHHhcCc------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 211 1 133688999998865 7899999999999999886 888888999999999999998643
Q ss_pred CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHh
Q 046900 246 AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASML 322 (442)
Q Consensus 246 ~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l 322 (442)
.+ . .++ .. +--+++.|++|.++-+| .=.|+++++++.+.+.++..... ..+++...+.+..-|
T Consensus 179 ~~-~---~pl-~~---------gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L 244 (364)
T PRK07269 179 IY-Q---RPI-EL---------GADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGL 244 (364)
T ss_pred cc-C---Cch-hh---------CCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCC
Confidence 22 1 121 22 22378899999996333 23588888666666655543322 245666666666555
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eee-cCCceEEEEEecCCcccccChhhHHHHHHHH---------H
Q 046900 323 SNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GI-ECL-KGNAGLFCWMNLSPLLEEQTREGELALWDSM---------L 390 (442)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l---------~ 390 (442)
+. +..+.++..++...+.+.|+++ ++ ++. ++.||++.+ .+... +....+.+.+ -
T Consensus 245 ~t-------L~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf-~~~~~------~~~~~f~~~l~~~~~~~slG 310 (364)
T PRK07269 245 KT-------LSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISF-KVADE------TRIPHILNSLKVFTFAESLG 310 (364)
T ss_pred Cc-------HHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEE-EECCH------HHHHHHHHhCCcceEccCCC
Confidence 54 3344455567777888888876 33 343 667775554 44321 1122333222 1
Q ss_pred HcCcEEEeCCCCCCC-----------CCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 391 HEVKLNISPGSSCHC-----------SEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 391 ~~~gi~v~pg~~f~~-----------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
....+.+.|++.+.. -.++.||||++- |+.+.+++-|.++++
T Consensus 311 ~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 311 GVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred CcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhc
Confidence 222556666554322 124689999996 456667777777653
No 208
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.89 E-value=3.2e-20 Score=182.87 Aligned_cols=333 Identities=13% Similarity=0.124 Sum_probs=205.9
Q ss_pred CCCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCcc
Q 046900 43 ESTNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKF 118 (442)
Q Consensus 43 ~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~ 118 (442)
.+.....+||+..+ .+.++ .+.+.+.+.+....... ....| ..+....+++.+.+..
T Consensus 30 ~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~--------~~~~~-----~~~~~~~la~~L~~~~------ 90 (397)
T TIGR03246 30 WDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWH--------IGNGY-----TNEPVLRLAKKLVDAT------ 90 (397)
T ss_pred EeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccc--------ccCcc-----CCHHHHHHHHHHHhhC------
Confidence 34456778998764 34443 35555555444321000 00111 1233445555555432
Q ss_pred CCCcEEEecChHHHHHHHHHhhc--------CCCCeEEEcCCCCcChHH-hHhhhcCcE------------EEEEecCCC
Q 046900 119 DLNRIVVTAGATAANELLTFILA--------DPGDALLVPTPYYPGFDR-DLRWRTGIK------------IVPIHCDSS 177 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~--------~~gd~Vl~~~p~y~~~~~-~~~~~~G~~------------v~~v~~~~~ 177 (442)
..+.+++++++++++..+++... ...+.|+..+-+|.+... .+.. .|.. +..+|.
T Consensus 91 ~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--- 166 (397)
T TIGR03246 91 FADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSV-GGQPKYSQGFAPLPGGIKHAPY--- 166 (397)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHh-cCCcccccCCCCCCCceEEeCC---
Confidence 24689999999999999988762 123567777777766533 2231 2321 112221
Q ss_pred CCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 178 NNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 178 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
.|++.+++.+.+ ++++|++..++++.|... +.+.+++|.++|++||+++|.||+|..+...+..+ ...
T Consensus 167 ----~d~~~l~~~l~~------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~ 235 (397)
T TIGR03246 167 ----NDLAAAKALISD------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYM 235 (397)
T ss_pred ----CCHHHHHHHhcc------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhh
Confidence 278999988853 677777774455566554 78899999999999999999999998765544321 111
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHHHhcCchhHHHHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLASMLSNKKFTENYIKT 334 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 334 (442)
... ...-+.++||.+| .|+++||+++ ++.+.+.+.... ..+..+++++.++.+.++... ..+
T Consensus 236 ~~g---------v~pDi~t~~K~lg-gG~pigav~~-~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~-----~~~ 299 (397)
T TIGR03246 236 HYG---------VTPDILTSAKALG-GGFPIGAMLT-TTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN-----TPE 299 (397)
T ss_pred hcC---------CCCCEEEeehhhh-CCcceeEEEE-cHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh-----hcc
Confidence 111 1111348999998 8999999999 566766665321 224467788887777776321 134
Q ss_pred HHHHHHHHHHHHHHHHHhCC--Ce--eecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCE
Q 046900 335 NRERLQKRYQMIIEGLRSAG--IE--CLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGW 410 (442)
Q Consensus 335 ~~~~~~~~~~~l~~~L~~~g--~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~ 410 (442)
..+.++++.+++.+.|++.+ .. ......|.++.+.+.... ......++..|+++ ||.+.+. +.++
T Consensus 300 l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~----~~~~~~~~~~l~~~-Gv~~~~~------g~~~ 368 (397)
T TIGR03246 300 LLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAY----QGKAKQFVNAAAEE-GVIALIA------GPNV 368 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCch----hhHHHHHHHHHHHC-CeEEeec------CCCE
Confidence 56777778888888887653 11 111223445555553211 01356788888777 9998762 2368
Q ss_pred EEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 411 FRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 411 iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
+|++++ .++++++++++++|.+++.+
T Consensus 369 lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 369 VRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999654 34899999999999998875
No 209
>PRK05968 hypothetical protein; Provisional
Probab=99.88 E-value=2.2e-20 Score=182.83 Aligned_cols=281 Identities=15% Similarity=0.162 Sum_probs=184.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH----HhHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD----RDLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~~G~~v~~v 172 (442)
...|++++|++++ .+..+++++++.++..++.+++++||+|+++.+.|.... ..+. ..|++++.+
T Consensus 65 ~~~le~~lA~l~g----------~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~-~~G~~v~~v 133 (389)
T PRK05968 65 VRAFEEMLAKLEG----------AEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILK-RMGVEVDYV 133 (389)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHH-HcCceEEEe
Confidence 5789999999875 223445566678999998889999999999999998633 3455 379999888
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+.+ |++.+++.+ + ++|+|++++|+||++. ..++++|+++|+++|+++|+|++|+...+..
T Consensus 134 d~~-------d~~~l~~~i-~------~tklV~ie~pt~~~~~---~~dl~~i~~la~~~gi~vivD~a~a~~~~~~--- 193 (389)
T PRK05968 134 DGR-------DEEAVAKAL-P------GAKLLYLESPTSWVFE---LQDVAALAALAKRHGVVTMIDNSWASPVFQR--- 193 (389)
T ss_pred CCC-------CHHHHHHhc-c------cCCEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcchhccC---
Confidence 632 678888876 2 6789999977777654 4679999999999999999999998644321
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHccc--c-CCCcHHHHHHHHHHhcCchhH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSS--F-TLISSQTQYLLASMLSNKKFT 328 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~--~-~~~s~~~q~~~~~~l~~~~~~ 328 (442)
++ .. +..+++.|+||.++.+| ++.|++++ ++.+.+.++.... . ..+++..+..+...|+..
T Consensus 194 -p~-~~---------g~Divv~S~tK~l~g~~~~~gG~i~~-~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl--- 258 (389)
T PRK05968 194 -PI-TL---------GVDLVIHSASKYLGGHSDTVAGVVAG-SKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRTL--- 258 (389)
T ss_pred -ch-hc---------CCcEEEeeccccccCCCCeEEEEEEE-CHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCcH---
Confidence 11 11 22377889999997655 68899887 4555554443221 1 345666666655555532
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec-C-----------CceEEEEEecCCcccccChhhHHHHHHHHHHcCcE
Q 046900 329 ENYIKTNRERLQKRYQMIIEGLRSA-GIECLK-G-----------NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKL 395 (442)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~-----------~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi 395 (442)
....++-.++.+.+.+.|+++ +++... | ..|-.+.+++... .+..++++.|.. .++
T Consensus 259 ----~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~------~~~~~f~~~L~~-~~~ 327 (389)
T PRK05968 259 ----PLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG------IDVRAFADALKL-FRL 327 (389)
T ss_pred ----HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH------HHHHHHHHhCCc-cEE
Confidence 223333344566777888775 454332 2 1122444565531 135677777743 376
Q ss_pred EEeCCCCCC------------C---------CCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 396 NISPGSSCH------------C---------SEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 396 ~v~pg~~f~------------~---------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.+.-|..+. . -.++.+|+|++- |+.+.+++-|.+++.+.
T Consensus 328 ~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl---E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 328 GVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL---EGTEALWADLEQALAAA 387 (389)
T ss_pred ecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHHh
Confidence 666665543 0 114689999996 34666677777777643
No 210
>PLN02651 cysteine desulfurase
Probab=99.88 E-value=6.9e-21 Score=185.89 Aligned_cols=280 Identities=16% Similarity=0.192 Sum_probs=187.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh----cCCCCeEEEcCCCCcChHHhHhh--hcCcEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL----ADPGDALLVPTPYYPGFDRDLRW--RTGIKIV 170 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l----~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~ 170 (442)
+.++|+.++++++ .++++|++|+|+++++.+++..+ .++||+|++....|+.+...+.. ..|++++
T Consensus 45 ~~~~r~~la~~~g--------~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~ 116 (364)
T PLN02651 45 VEKARAQVAALIG--------ADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEE
Confidence 3456666666654 56889999999999988776554 47899999998888765443321 3699999
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
.++.++ ++.+|++.+++.+++ +++++++++++||||.+.+ +++|.++|+++|+++++|.+++...
T Consensus 117 ~v~~~~--~~~~d~~~l~~~i~~------~t~lv~v~~~~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g~---- 181 (364)
T PLN02651 117 YLPVKS--DGLVDLDELAAAIRP------DTALVSVMAVNNEIGVIQP---VEEIGELCREKKVLFHTDAAQAVGK---- 181 (364)
T ss_pred EEccCC--CCcCCHHHHHHhcCC------CcEEEEEECCCCCceeccc---HHHHHHHHHHcCCEEEEEcchhhCC----
Confidence 998864 356899999999865 7889999999999999998 7788889999999999999998421
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH---------ccccCCCcHHHHHHHHHH
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR---------MSSFTLISSQTQYLLASM 321 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~---------~~~~~~~s~~~q~~~~~~ 321 (442)
....+..+ +--+++.|.+|.+|. ..+|++++.++... .+.. ....++.+.....++.+.
T Consensus 182 ~~~~~~~~---------~~D~~~~s~hK~~gp--~G~g~l~v~~~~~~-~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~a 249 (364)
T PLN02651 182 IPVDVDDL---------GVDLMSISGHKIYGP--KGVGALYVRRRPRV-RLEPLMSGGGQERGRRSGTENTPLVVGLGAA 249 (364)
T ss_pred cccCcccC---------CCCEEEechhhhCCC--CceEEEEEcCCCCC-CCCccccCCCccCCccCCCccHHHHHHHHHH
Confidence 12222222 233678899996553 34799888543221 1110 011233444444444444
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeeecCC-----ceEEEEEecCCcccccChhhHHHHHHHHHHcCc
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRS-A-GIECLKGN-----AGLFCWMNLSPLLEEQTREGELALWDSMLHEVK 394 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 394 (442)
++ ++.+..+..+++.++.++++.+.|.+ . |+++..+. ....+.+.++.. +..++...|. +
T Consensus 250 l~---~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~L~-~-- 316 (364)
T PLN02651 250 CE---LAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYV-------EGESLLMGLK-E-- 316 (364)
T ss_pred HH---HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCC-------CHHHHHHHhC-C--
Confidence 44 33333456677788888888888875 3 77777641 122444455432 2557777773 3
Q ss_pred EEEeCCCCCCCC-----------------CCCEEEEEeecC-CHHHHH
Q 046900 395 LNISPGSSCHCS-----------------EPGWFRVCFANM-SEQTLE 424 (442)
Q Consensus 395 i~v~pg~~f~~~-----------------~~~~iRls~~~~-~~e~i~ 424 (442)
|.+..|+.|... ..+.+|+|++.- |++|++
T Consensus 317 i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 317 VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 999998876432 136899999832 667653
No 211
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=4.9e-20 Score=179.03 Aligned_cols=215 Identities=14% Similarity=0.130 Sum_probs=154.9
Q ss_pred ccCCC--cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH----hh
Q 046900 90 LFQDY--HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL----RW 163 (442)
Q Consensus 90 ~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~ 163 (442)
.|+.. .....|+++||++.+ .+++++++|+++|+..++.+++++||+|++++|.|.++...+ .
T Consensus 54 ~Y~r~~npt~~~Le~~iA~le~----------~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~- 122 (394)
T PRK09028 54 FYGRRGTPTHFAFQAAIVELEG----------GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILK- 122 (394)
T ss_pred eecCCCCchHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhh-
Confidence 35543 245799999998853 357899999999999999999999999999999998876533 3
Q ss_pred hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 164 RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 164 ~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
..|+++..++.+ +.+.+++.+++ ++|+|++++|+||||.+. ++++|+++|+++|+++|+|++|+
T Consensus 123 ~~Gi~v~~v~~~-------~~e~l~~~l~~------~TklV~lespsNPtg~v~---dl~~I~~la~~~g~~lvvD~t~a 186 (394)
T PRK09028 123 GFGIETTYYDPM-------IGEGIRELIRP------NTKVLFLESPGSITMEVQ---DVPTLSRIAHEHDIVVMLDNTWA 186 (394)
T ss_pred hcceEEEEECCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcHH---HHHHHHHHHHHcCCEEEEECCcc
Confidence 378888776532 45778887754 799999999999998874 48999999999999999999998
Q ss_pred cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccC-CCCCceeEEEeecCHHHHHHHHHccc-c-CCCcHHHHHHHHH
Q 046900 244 GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDL-GLPGFRVGTIYSYNDKVVTTARRMSS-F-TLISSQTQYLLAS 320 (442)
Q Consensus 244 ~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~G~RiG~i~~~~~~~~~~~~~~~~-~-~~~s~~~q~~~~~ 320 (442)
.... ..++ .+ +--+++.|.+|.+ |..++-.|+++. ++.+.+.+..... . ..+++...+.+..
T Consensus 187 ~p~~----~~Pl-~~---------GaDivv~S~tK~l~Gh~d~~~G~~~~-~~~~~~~l~~~~~~~G~~~~p~~a~l~~r 251 (394)
T PRK09028 187 SPIN----SRPF-EM---------GVDISIQAATKYIVGHSDVMLGTATA-NEKHWDQLREHSYLMGQCTSPDDVYLAMR 251 (394)
T ss_pred cccc----CCcc-cc---------CceEEEEeCCeEecCCCCEEEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence 5221 1121 22 3348899999998 555577887766 4544444432221 2 3456666666555
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 321 MLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
-++. +.-+.++..++...+.+.|+++
T Consensus 252 gl~T-------L~lR~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 252 GLRT-------LGVRLAQHEKNALKVANWLATR 277 (394)
T ss_pred ccCc-------HHHHHHHHHHHHHHHHHHHhcC
Confidence 5554 3334455567777888888876
No 212
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.88 E-value=1e-19 Score=182.74 Aligned_cols=315 Identities=14% Similarity=0.134 Sum_probs=201.7
Q ss_pred cccc---CCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHH--HH-hhcCCCC----eEEEcCCCCcCh
Q 046900 88 NALF---QDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELL--TF-ILADPGD----ALLVPTPYYPGF 157 (442)
Q Consensus 88 ~~~Y---~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~--~~-~l~~~gd----~Vl~~~p~y~~~ 157 (442)
.+.| ...+|..+++.++.+++.+.+| ++...+..++|+++.+..+ ++ .+.++|| +|+++.|.|+.+
T Consensus 99 ~tpYq~e~~sqG~lel~~~~~~~la~l~G----~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~ 174 (481)
T PRK04366 99 LHPLQPEETVQGALELMYELQEWLKEITG----MDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTN 174 (481)
T ss_pred CCCCCChhhhhHHHHHHHHHHHHHHHHhC----CCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhH
Confidence 3556 3457899999999999999877 4445666667776666533 33 3456776 999999999999
Q ss_pred HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEE
Q 046900 158 DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLV 237 (442)
Q Consensus 158 ~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi 237 (442)
...+.. .|++++.++++. ++.+|++.|++.+.+ ++++|++++|| |||.+ .+++++|+++|++++++++
T Consensus 175 ~~~~~~-~G~~vv~v~~~~--~~~~D~e~L~~~i~~------~t~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~gal~i 242 (481)
T PRK04366 175 PASAAM-AGFKVVEIPSNE--DGLVDLEALKAAVGE------DTAALMLTNPN-TLGLF--ERNILEIAEIVHEAGGLLY 242 (481)
T ss_pred HHHHHH-cCCEEEEeecCC--CCCcCHHHHHhhccc------CCeEEEEeCCC-Ccccc--chHHHHHHHHHHHcCCEEE
Confidence 998885 999999999864 467999999998865 78899999998 99964 3469999999999999999
Q ss_pred EeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC----CceeEEEeecCHHHHHHHH-Hc-----ccc
Q 046900 238 SDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP----GFRVGTIYSYNDKVVTTAR-RM-----SSF 307 (442)
Q Consensus 238 ~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~----G~RiG~i~~~~~~~~~~~~-~~-----~~~ 307 (442)
+|.++..... +. .+...+ +--++++|.+|.||.| |-.+|++.+.+ .+.+.+. .. ..+
T Consensus 243 VD~a~~~~~~-g~--~~~~~~---------GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~-~~~~~lp~~~v~~~g~~~ 309 (481)
T PRK04366 243 YDGANLNAIL-GK--ARPGDM---------GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKE-ELAPFLPVPVVEKDGDRY 309 (481)
T ss_pred EEecChhhhc-cc--CCcccc---------CCCEEEEechhhcCCCCCCCCCCeeeeeehh-hhHhhCCCCeeeccCCce
Confidence 9999853212 11 111122 3347889999998644 45578888743 3333321 00 000
Q ss_pred ---------------CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceE-EEEEecC
Q 046900 308 ---------------TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGL-FCWMNLS 371 (442)
Q Consensus 308 ---------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~-~~~~~~~ 371 (442)
+..+.....++..++...+ .+-+++..++..++.+++.+.|.+. +++..+...+ -+.++++
T Consensus 310 ~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G--~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~~~~~~~~~~~~~ 386 (481)
T PRK04366 310 RLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLG--AEGLREVSEDAVLNANYLKARLKDI-YDLPYDRPCMHEFVLSGK 386 (481)
T ss_pred eecccccccCCCcccccCchHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHhh-CcccCCCCeeEEEEEECc
Confidence 0001111122222222111 2334555566677788888888875 2222111111 1223332
Q ss_pred CcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHHH
Q 046900 372 PLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 372 ~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~~ 438 (442)
.. ...+ .+..++.+.|.++ ||.+. +..|.....+.+|+++.. -++++++++++.|+++.++..
T Consensus 387 ~~-~~~g-~~~~~v~~~L~~~-Gi~~~-~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~ 450 (481)
T PRK04366 387 KL-KETG-VRTLDIAKRLLDY-GFHPP-TIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAK 450 (481)
T ss_pred cc-cccC-CCHHHHHHHHHHC-CccCC-ccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11 0000 0367788888776 99865 233322225679999862 289999999999999877654
No 213
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=6.8e-20 Score=179.49 Aligned_cols=210 Identities=15% Similarity=0.146 Sum_probs=146.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH----HhHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD----RDLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~~G~~v~~v 172 (442)
...|++++|++.+ .+ +.+++++| +.++.+++. ++++||+|+++.|.|+... ..++ ..|++++.+
T Consensus 56 ~~~le~~lA~l~g--------~~-~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~-~~G~~v~~v 123 (390)
T PRK08064 56 REALEDIIAELEG--------GT-KGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLS-RFGIEHTFV 123 (390)
T ss_pred HHHHHHHHHHHhC--------CC-CeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHH-HcCCEEEEE
Confidence 5788888888875 23 45666555 668888776 6789999999999998533 3344 389999998
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+.+ |++.+++.+++ ++++|++++|+||||.+.+ +++|.++|+++++++|+|++|+.....
T Consensus 124 ~~~-------d~~~l~~~l~~------~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---- 183 (390)
T PRK08064 124 DMT-------NLEEVAQNIKP------NTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ---- 183 (390)
T ss_pred CCC-------CHHHHHHhcCC------CceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc----
Confidence 753 67888888764 7899999999999999987 677788888999999999999864321
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENY 331 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 331 (442)
.++ .+ +..+++.|+||.++ .+|...|++++.++.+.+.++.....++.+...+.+.. .+.... .
T Consensus 184 ~~~-~~---------g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l-~~~gl~----t 248 (390)
T PRK08064 184 KPL-DL---------GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL-VLRGLK----T 248 (390)
T ss_pred Cch-hh---------CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH-HHcccC----c
Confidence 111 22 33478899999985 34466788877666777777665554333322222222 223222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC
Q 046900 332 IKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 332 ~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+....++..++...+.+.|+++
T Consensus 249 l~~R~~~~~~~a~~la~~L~~~ 270 (390)
T PRK08064 249 LHVRLEHSSETANKIALYLQEH 270 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 3444555567777778888765
No 214
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.88 E-value=7e-20 Score=179.13 Aligned_cols=292 Identities=17% Similarity=0.240 Sum_probs=185.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD 175 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~ 175 (442)
..++++++++++.+.++ .+++++++|+++++.+++.++ +++||.|+++.|+|+.+...+.. .|++++.++++
T Consensus 29 ~~~~~~~~e~~la~~~g------~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~-~G~~~v~~d~d 101 (375)
T PRK11706 29 DGGFTRRCQQWLEQRFG------SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVL-RGAKIVFVDIR 101 (375)
T ss_pred CCHHHHHHHHHHHHHhC------CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHH-cCCEEEEEecC
Confidence 34677888887776644 578999999999999887765 78999999999999999998885 99999999988
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC-CCCCCccc
Q 046900 176 SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA-FSSSEFVS 254 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~-~~~~~~~s 254 (442)
++ +|.+|++++++.+++ ++++|+++ |++|...+ +++|+++|+++|++||+|++|+.+. +++.+..+
T Consensus 102 ~~-~~~~d~~~le~~i~~------~tk~i~~~---~~~G~~~~---~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~ 168 (375)
T PRK11706 102 PD-TMNIDETLIEAAITP------KTRAIVPV---HYAGVACE---MDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGT 168 (375)
T ss_pred CC-cCCcCHHHHHHhcCC------CCeEEEEe---CCCCCccC---HHHHHHHHHHcCCEEEEECccccccccCCeeeec
Confidence 64 588999999998864 78888876 46898766 6788888989999999999998654 33321111
Q ss_pred HHHHHhhhcCCCCCcEEEEecCc--ccCCCCCceeEEEeecCHHHHHHHHHcccc-------------------CCCcHH
Q 046900 255 IAEILEARQYKDSERVHIVYSLS--KDLGLPGFRVGTIYSYNDKVVTTARRMSSF-------------------TLISSQ 313 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~S--K~~g~~G~RiG~i~~~~~~~~~~~~~~~~~-------------------~~~s~~ 313 (442)
+ . .+.+.||+ |.++ +|.+.++++. ++.+.+.++..... .+.+..
T Consensus 169 ---~---------~-~~~~~Sf~~~K~l~-~g~gG~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 233 (375)
T PRK11706 169 ---I---------G-HIGCFSFHETKNYT-AGEGGALLIN-DPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYL 233 (375)
T ss_pred ---C---------c-CEEEEeCCCCcccc-ccCCeEEEEC-CHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccC
Confidence 1 1 12334444 9997 6888777765 56666554432211 112221
Q ss_pred HHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC---C-Ceee-cCC----ceEEEEEecCCcccccChhhHH
Q 046900 314 TQYLLASM-LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA---G-IECL-KGN----AGLFCWMNLSPLLEEQTREGEL 383 (442)
Q Consensus 314 ~q~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g-~~~~-~~~----~g~~~~~~~~~~~~~~~~~~~~ 383 (442)
.+...+++ +.... .+++..++-+++.+.+.+.|.+. + +.+. .+. ...++|+.++... +..
T Consensus 234 ~~~~~aa~~~~ql~----~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~r~ 303 (375)
T PRK11706 234 PSELQAAYLWAQLE----AADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLE------DRS 303 (375)
T ss_pred cCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcC------CHH
Confidence 12121221 11111 13333334444445555666543 1 3221 121 2335566665421 356
Q ss_pred HHHHHHHHcCcEEEeCCC----C---C---C---CCCC-------CEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 384 ALWDSMLHEVKLNISPGS----S---C---H---CSEP-------GWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 384 ~l~~~l~~~~gi~v~pg~----~---f---~---~~~~-------~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
++.+.|.++ ||.+.... . | + ...+ ..+-|-+. .+++++++..++.|++++
T Consensus 304 ~l~~~L~~~-gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 304 ALINFLKEA-GIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred HHHHHHHHC-CCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 788888776 99875321 0 0 0 0000 12333332 458899999999988764
No 215
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.87 E-value=5.9e-20 Score=181.59 Aligned_cols=164 Identities=21% Similarity=0.282 Sum_probs=130.1
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH----HhHhhh
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD----RDLRWR 164 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~ 164 (442)
.+|+.+ -..+|++.+|++++ .+..++++++++++..++.+++++||+|+++.+.|+... ..+. .
T Consensus 52 sr~~~p-~~~~le~~lA~l~g----------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~-~ 119 (418)
T TIGR01326 52 SRLMNP-TTDVLEQRIAALEG----------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLK-R 119 (418)
T ss_pred ECCCCh-hHHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHH-H
Confidence 344443 35788888888865 356788999999999999999999999999999986543 3345 3
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|++++.++.+ |++.+++.+++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.
T Consensus 120 ~G~~v~~v~~~-------d~~~l~~~l~~------~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~ 183 (418)
T TIGR01326 120 LGIEVRFVDPD-------DPEEFEKAIDE------NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFAT 183 (418)
T ss_pred cCcEEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCch
Confidence 89999988742 78899988865 7889999999999999987 77888889999999999999974
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecC
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYN 294 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~ 294 (442)
..+ ..+ + . .+..+++.|+||.+|.+|+|+||+++++
T Consensus 184 ~~~----~~~---l-~------~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 184 PYL----CRP---I-D------HGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred hhc----CCc---h-h------cCCeEEEECccccccCCccceEEEEEec
Confidence 211 111 1 1 2456899999999998999999999854
No 216
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.87 E-value=1.4e-19 Score=176.48 Aligned_cols=267 Identities=16% Similarity=0.208 Sum_probs=176.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
++++++++++.++..++. ++++||+|+++.+.|..+... +. ..|++++.+++. |++.+++++++
T Consensus 63 ~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~-~~G~~v~~vd~~-------d~~~le~~i~~--- 130 (378)
T TIGR01329 63 DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVP-RSGVVVVHVDTT-------DLDKVKAALGP--- 130 (378)
T ss_pred CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHH-HcCcEEEEeCCC-------CHHHHHHhcCc---
Confidence 567777777889988776 779999999999999876543 33 379999988752 68899988864
Q ss_pred cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecC
Q 046900 197 KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSL 276 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~ 276 (442)
++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|+... ...++ .+ +-.+++.|+
T Consensus 131 ---~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~----~~~~l-~~---------g~Di~v~S~ 190 (378)
T TIGR01329 131 ---KTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPL----LCNPL-EL---------GADIVYHSA 190 (378)
T ss_pred ---CceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChh-hc---------CCcEEEEec
Confidence 8899999999999999987 8888999999999999999986322 11222 22 223788999
Q ss_pred cccCCC-CCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 277 SKDLGL-PGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 277 SK~~g~-~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+|.++- .+++.|+++++++.+.+.++..... ...++...+.+..-++. +..+.++-.++...+.+.|+++
T Consensus 191 tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~t-------l~~R~e~~~~na~~la~~L~~~ 263 (378)
T TIGR01329 191 TKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKT-------LAIRIEKQQENARAIAMFLSTH 263 (378)
T ss_pred ceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCC-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 998853 3578999988666665555543332 23344443333333332 2333444455556666666654
Q ss_pred -CC-eeec----------------CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC----------
Q 046900 354 -GI-ECLK----------------GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC---------- 405 (442)
Q Consensus 354 -g~-~~~~----------------~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~---------- 405 (442)
.+ ++.- ...|-.+.+++.. .....++++.| +..++.++-|.....
T Consensus 264 ~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~------~~~~~~~~~~L-~~~~i~~s~G~~~sl~~~p~~~~~~ 336 (378)
T TIGR01329 264 PRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS------VALSKRLVEAT-KLFSITVSFGSVNSLISMPCFMSHA 336 (378)
T ss_pred CCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC------HHHHHHHHHhC-cCcccccCCCCCCceeeCCCccccc
Confidence 11 1110 1122345555522 12356777777 566777777765321
Q ss_pred -----------CCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 406 -----------SEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 406 -----------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
-.++.||||++- |+.+.+++.|.+++++
T Consensus 337 ~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 337 SIPAEVREERGLPEDLVRLSVGI---EDVDDLISDLDIAFVT 375 (378)
T ss_pred cCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHh
Confidence 124689999996 4567778888877764
No 217
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=5.1e-20 Score=180.42 Aligned_cols=210 Identities=20% Similarity=0.225 Sum_probs=153.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----HhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~~G~~v~~v 172 (442)
...|++.+|++.+ ....+++++++.|+.+++.+++++||+|+++.++|.+.... +. ..|+++..+
T Consensus 63 v~~lE~~la~leg----------~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~-~~Gi~v~~v 131 (432)
T PRK06702 63 LAAFEQKLAELEG----------GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLR-KLGIDVTFF 131 (432)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHH-HCCCEEEEE
Confidence 5677888888764 34578999999999999999999999999999999865554 45 489999888
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
.. .+|++.+++++++ ++|+|++.+|+||++.+.+ +++|+++|+++|+++|+|++|+. +..
T Consensus 132 d~------~~d~~~l~~~I~~------~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~t-----P~~ 191 (432)
T PRK06702 132 NP------NLTADEIVALAND------KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLAT-----PYL 191 (432)
T ss_pred CC------CCCHHHHHHhCCc------CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCc-----hhh
Confidence 53 3688999999876 8999999999999999999 88889999999999999999862 111
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcc-----cCCCCCcee-----EEEeecCHHHHH-----------------------
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSK-----DLGLPGFRV-----GTIYSYNDKVVT----------------------- 299 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK-----~~g~~G~Ri-----G~i~~~~~~~~~----------------------- 299 (442)
.....+ +-.|+++|+|| ..+++|+++ +|...++..+..
T Consensus 192 ~~pl~~---------GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (432)
T PRK06702 192 CQAFEH---------GANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKA 262 (432)
T ss_pred CChhhc---------CCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHH
Confidence 222222 33388999999 777888887 565543222211
Q ss_pred HHHHcccc-CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 300 TARRMSSF-TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 300 ~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
.......+ ..+++...+.+...|+..+ .+.++-.++...+.+.|+++
T Consensus 263 ~~~~~~~~g~~~sp~~a~l~~rgL~Tl~-------lR~~r~~~Na~~la~~L~~~ 310 (432)
T PRK06702 263 RVQLLRDYGNCMSPFNAYISNIGLETLH-------LRMERHSENALAVAKWLADH 310 (432)
T ss_pred HHHHHHHccCCCCHHHHHHHHhccCcHH-------HHHHHHHHHHHHHHHHHHhC
Confidence 11112222 3567777777777776532 22333357778888888875
No 218
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=1.4e-19 Score=178.77 Aligned_cols=156 Identities=21% Similarity=0.308 Sum_probs=125.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH----HhHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD----RDLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~~G~~v~~v 172 (442)
...|.+.+|++.+ .+..++++|+++++..++..++++||+|+++.+.|+... ..++ ..|++++.+
T Consensus 66 ~~~Le~~lA~leg----------~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~-~~Gv~v~~v 134 (431)
T PRK08248 66 TDVFEKRIAALEG----------GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLP-KLGITVKFV 134 (431)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHH-hCCEEEEEE
Confidence 4678888888764 457789999999999999999999999999999997643 3344 489999998
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+. .|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++++++|+|++|+.. ...
T Consensus 135 d~-------~d~e~l~~ai~~------~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~----~~~ 194 (431)
T PRK08248 135 DP-------SDPENFEAAITD------KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASP----YLL 194 (431)
T ss_pred CC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcc----ccC
Confidence 75 278899988864 7899999999999999999 668888899999999999998731 111
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeec
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSY 293 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~ 293 (442)
.++ .+ +..+++.|++|.+|.+|.++|++++.
T Consensus 195 ~pl-~~---------gaDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 195 RPI-EH---------GADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred Chh-Hc---------CCCEEEEcCccccCCCCCceEEEEEe
Confidence 222 22 44588899999999999999998773
No 219
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.87 E-value=2.1e-19 Score=178.10 Aligned_cols=311 Identities=12% Similarity=0.053 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcC--------c-
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTG--------I- 167 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G--------~- 167 (442)
+.+..+|+.+.+... .-..+.+++++++++|++.+++... .....|+...-+|.+....+....| .
T Consensus 76 ~~~~~la~~l~~~~p---~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 152 (420)
T TIGR00700 76 EGYVALAEKLNRIAP---GSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFG 152 (420)
T ss_pred hHHHHHHHHHHHhCC---CCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCC
Confidence 334456666554321 0112589999999999998876542 2335688788888775433221111 1
Q ss_pred ----EEEEEecCCCC---------CCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHH-HHHHHHHHHhcC
Q 046900 168 ----KIVPIHCDSSN---------NFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSV-LEELLDFATRKN 233 (442)
Q Consensus 168 ----~v~~v~~~~~~---------~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~-l~~l~~~~~~~~ 233 (442)
.+..+|..... .+.-+++.+++.+... ....++.+|++..-..-+|.+++.++ +++|.++|++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g 231 (420)
T TIGR00700 153 PFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID-VGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHG 231 (420)
T ss_pred CCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh-cCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 11222221000 0000144556555311 11235666665544667888775555 999999999999
Q ss_pred cEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCc
Q 046900 234 IHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLIS 311 (442)
Q Consensus 234 ~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s 311 (442)
+++|+||+|..+.+.+. +.+.... +.+..+.+|||.++ +|+|+||+++ ++.+.+.+.. ....+..+
T Consensus 232 illI~DEV~tg~gr~g~-~~a~~~~---------~~~pDi~~lsK~l~-~G~pig~v~~-~~~i~~~~~~~~~~~T~~~~ 299 (420)
T TIGR00700 232 IVFIADEVQTGFARTGA-MFACEHE---------GPEPDLITTAKSLA-DGLPLSGVTG-RAEIMDAPAPGGLGGTYAGN 299 (420)
T ss_pred CEEEEEecccCCcccch-hHHHhhc---------CCCCCEEEeecccc-CCcceEEEEe-cHHHHhhcCCCCcCCCCCcC
Confidence 99999999998876553 2222211 12222456999998 9999999999 5666665532 22335678
Q ss_pred HHHHHHHHHHhc---CchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCceEEEEEecCCccc-ccChhhHHHHH
Q 046900 312 SQTQYLLASMLS---NKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECLKGNAGLFCWMNLSPLLE-EQTREGELALW 386 (442)
Q Consensus 312 ~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~l~ 386 (442)
+++|.++.+.++ ..++ .+++.+..+.++++.+.+.+ +++ +....+. |+++|+++..... .........+.
T Consensus 300 pl~~aaa~a~l~~l~~~~~-~~~~~~~g~~l~~~L~~l~~---~~~~~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~ 374 (420)
T TIGR00700 300 PLACAAALAVLAIIESEGL-IERARQIGRLVTDRLTTLKA---VDPRIGDVRGL-GAMIAVELVDPGTTEPDAGLAERIA 374 (420)
T ss_pred HHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHh---hCCCEEEeecc-ceEEEEEEecCCCCCccHHHHHHHH
Confidence 889988866553 3332 33444444444443333333 232 3334444 6788887742100 01111245566
Q ss_pred HHHHHcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHH
Q 046900 387 DSMLHEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 387 ~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~ 435 (442)
..++++ ||.+.|++.|+ +++||+++. ++++++++++++|.+++.
T Consensus 375 ~~~~~~-Gv~i~p~~~f~----~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 375 TAAHAA-GLLLLTCGMFG----NIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred HHHHHC-CeEEeccCCCC----CEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 666565 99999987773 589999863 589999999999999874
No 220
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.87 E-value=6.7e-19 Score=175.90 Aligned_cols=361 Identities=12% Similarity=0.108 Sum_probs=208.4
Q ss_pred CCCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+.....+||+..+. ..+ .++.+.+.+.+..... ..........+.+..+|+.+.+...
T Consensus 46 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~------------~~~~~~~~~~~~~~~la~~L~~~~p-- 111 (451)
T PRK06918 46 ALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQY------------IHTGFNVMMYEPYIELAEKLAALAP-- 111 (451)
T ss_pred cEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhc------------cCccccccccHHHHHHHHHHHHhCC--
Confidence 444445567788886553 223 2355555555443211 0000111123555667776665421
Q ss_pred CccC-CCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCc-------------EEEEEecCCC--
Q 046900 116 AKFD-LNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGI-------------KIVPIHCDSS-- 177 (442)
Q Consensus 116 ~~~~-~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~-------------~v~~v~~~~~-- 177 (442)
.. .+.+++++++++|++.+++... .....|+....+|.+....+....|- .+..+|....
T Consensus 112 --~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (451)
T PRK06918 112 --GSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYR 189 (451)
T ss_pred --CCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCcccc
Confidence 11 1589999999999999887542 22356888888887765433211121 1222221100
Q ss_pred CCCcCC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCC-CCcCCCH-HHHHHHHHHHHhcCcEEEEeccCCcCCC
Q 046900 178 NNFQIT--------PQALEAAYKEAESKDMRVRGVLITNPSNP-LGATIQR-SVLEELLDFATRKNIHLVSDEIYSGSAF 247 (442)
Q Consensus 178 ~~~~~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P~NP-tG~~~~~-~~l~~l~~~~~~~~~~vi~De~y~~~~~ 247 (442)
....+. .+.+++.+.... ...++ +.++..|-.. .|.+++. +.+++|.++|++||+++|+||+|..+.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i-Aavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr 267 (451)
T PRK06918 190 RPEGLTEEQYDDFMIEEFKNFFISEV-APETI-AAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFAR 267 (451)
T ss_pred ccccCchHHHHHHHHHHHHHHHHhhc-CCCce-EEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCc
Confidence 000111 122333332110 11234 4566667544 4665554 4599999999999999999999999877
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhc--
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLS-- 323 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~-- 323 (442)
.+. +.+...+... ++ +.||||.++ +|+|+||+++ ++.+.+.+.. ....+..++++|.++.+.++
T Consensus 268 ~g~-~~a~~~~~v~-----pD----i~t~sK~l~-~G~pig~v~~-~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i 335 (451)
T PRK06918 268 TGK-YFAIEHFDVV-----PD----LITVSKSLG-AGVPISGVIG-RKEIMDESAPGELGGTYAGSPLGCAAALAVLDII 335 (451)
T ss_pred cCc-eehhHhcCCC-----CC----EEeeehhhc-CCCccEEEEE-cHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHH
Confidence 664 3333333211 22 458999998 9999999999 4566655542 22235678888888666554
Q ss_pred -CchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCceEEEEEecCCcc-cccChhhHHHHHHHHHHcCcEEEeCC
Q 046900 324 -NKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECLKGNAGLFCWMNLSPLL-EEQTREGELALWDSMLHEVKLNISPG 400 (442)
Q Consensus 324 -~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~gi~v~pg 400 (442)
++. +.++++.+.+.+.++.+.+.+ +++ +....+.|+++.|....+.. ..........+...++++ ||.+.|+
T Consensus 336 ~~~~-~~~~~~~~g~~l~~~l~~l~~---~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-Gvlv~~~ 410 (451)
T PRK06918 336 EKEN-LNDRAIELGKVVMNRFEEMKN---KYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKR-GLLLLSA 410 (451)
T ss_pred HHCC-HHHHHHHHHHHHHHHHHHHHh---hCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHC-CeEEeec
Confidence 333 244455555555544444433 222 23345677777776542210 001112345666676666 9999998
Q ss_pred CCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHHHh
Q 046900 401 SSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 401 ~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
..|+ +++|++++. ++++++++++++|.+++.+...
T Consensus 411 ~~~~----~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 411 GTYG----NVIRVLMPLVITDEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred CCCC----CEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 6663 589999873 6899999999999999987543
No 221
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.87 E-value=1.3e-20 Score=178.25 Aligned_cols=166 Identities=20% Similarity=0.295 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS 176 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~ 176 (442)
+.++++.+|++++ . .+-+++++|+++++..++.+++++||.|+++.|+|..+...+.. .|++++.++.+.
T Consensus 61 i~~~~~~~A~~~g--------a-~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~-~g~~~~~v~~~~ 130 (294)
T cd00615 61 IKEAQELAARAFG--------A-KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVL-SGAVPVYLKPER 130 (294)
T ss_pred HHHHHHHHHHHhC--------C-CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHH-CCCEEEEecCcc
Confidence 6788899999875 1 23455699999999999999999999999999999999888885 899999988764
Q ss_pred CCCC----cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc-CCCCCCC
Q 046900 177 SNNF----QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG-SAFSSSE 251 (442)
Q Consensus 177 ~~~~----~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~-~~~~~~~ 251 (442)
+.+| .+|++.+++.+++ ..+++++++++| ||+|.+++ +++|+++|+++++++|+||+|+. +.|.+..
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~----~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~ 202 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIE----HPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPIL 202 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHh----CCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCccc
Confidence 4433 6899999999875 236889999999 79999998 78899999999999999999974 3333321
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEe
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIY 291 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~ 291 (442)
..+... .+..+++.|++|++ +|++.|+++
T Consensus 203 ~~~~~~---------~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 203 PSSAAM---------AGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred Ccchhh---------cCCcEEEEchhccc--chHhHHHHH
Confidence 112111 25668899999976 778765544
No 222
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=1.9e-19 Score=175.37 Aligned_cols=214 Identities=18% Similarity=0.236 Sum_probs=147.3
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH----hHhhhc
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR----DLRWRT 165 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~ 165 (442)
+|+++ -...|++.+|++.+ . ...+++.+| +.++..++ .++++||+|+++.|.|+.... .+. ..
T Consensus 46 r~~~p-~~~~Le~~lA~l~g--------~-~~~~~~~sG-~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~-~~ 112 (377)
T PRK07671 46 RTGNP-TRAALEELIAVLEG--------G-HAGFAFGSG-MAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLN-RF 112 (377)
T ss_pred CCCCh-HHHHHHHHHHHHhC--------C-CceEEeCCH-HHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHh-cC
Confidence 34443 35788888888875 1 234665555 56777765 577899999999999985433 233 37
Q ss_pred CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 166 GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 166 G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
|++++.++. .|++.+++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..
T Consensus 113 G~~v~~v~~-------~d~~~l~~ai~~------~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~ 176 (377)
T PRK07671 113 GIEHTFVDT-------SNLEEVEEAIRP------NTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTP 176 (377)
T ss_pred CeEEEEECC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCcc
Confidence 999888863 378999998864 7899999999999999877 777888888999999999999753
Q ss_pred CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHh
Q 046900 246 AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASML 322 (442)
Q Consensus 246 ~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l 322 (442)
.+. . ++ .+ +..+++.|+||.+|-++ .-.|++++.++.+.+.+...... ...++...+.+..-+
T Consensus 177 ~~~-~---p~-~~---------g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l 242 (377)
T PRK07671 177 YWQ-S---PI-SL---------GADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGL 242 (377)
T ss_pred ccC-C---hh-hh---------CCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCc
Confidence 332 1 11 11 33488999999997443 34677777666676666554444 334454444333322
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 323 SNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+. +..+.++..++...+.+.|++.
T Consensus 243 ~t-------l~~R~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 243 KT-------LGIRMEEHETNSRAIAEFLNNH 266 (377)
T ss_pred Ch-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 22 3445556667888888888875
No 223
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=2.4e-19 Score=176.92 Aligned_cols=157 Identities=25% Similarity=0.262 Sum_probs=123.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hcCcEEEEEe
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RTGIKIVPIH 173 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~~v~ 173 (442)
...|++++|++.+ .+..++++++++++..++.+++++||+|+++.+.|......+.. ..|+++..++
T Consensus 60 ~~~Le~~lA~l~g----------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d 129 (425)
T PRK06084 60 NDVLEQRVAALEG----------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA 129 (425)
T ss_pred HHHHHHHHHHHhC----------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC
Confidence 4688888888864 34566788888999999999999999999999999865544431 1466666554
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
. .|++.+++++++ ++++|++++|+||||.+++ +++|+++|++++++||+|++|+.... ..
T Consensus 130 ~-------~d~e~le~ai~~------~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~----~~ 189 (425)
T PRK06084 130 H-------DDIAALEALIDE------RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL----CR 189 (425)
T ss_pred C-------CCHHHHHHHhcc------CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CC
Confidence 2 378999999875 7899999999999999998 78888899999999999999984321 11
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeec
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSY 293 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~ 293 (442)
+ ..+ +..+++.|++|.++.+|.++|.+++.
T Consensus 190 p-~~~---------gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 190 P-FEH---------GADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred h-hhc---------CCCEEEECchhcccccccceeEEEEe
Confidence 1 122 23388999999998899999987774
No 224
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.86 E-value=5.5e-19 Score=174.85 Aligned_cols=313 Identities=11% Similarity=0.122 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCc--------
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGI-------- 167 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~-------- 167 (442)
.+....+|+.+.+... ....+.+++++++++|++.+++... ....+|+...-+|.+....+....|.
T Consensus 82 ~~~~~~la~~l~~~~p---~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 158 (421)
T PRK09792 82 YESYVTLAEKINALAP---VSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGF 158 (421)
T ss_pred CHHHHHHHHHHHHhCC---CCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCC
Confidence 3444566666654321 0112579999999999998877652 22357888888887754322111121
Q ss_pred -----EEEEEecCCCCCCcC----CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEE
Q 046900 168 -----KIVPIHCDSSNNFQI----TPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLV 237 (442)
Q Consensus 168 -----~v~~v~~~~~~~~~~----d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi 237 (442)
.++.+|...... .+ +++.+++.+++.. ...++.+|++...++|+|..+ +.+.+++|.++|++|++++|
T Consensus 159 ~~~~~~~~~v~~p~~~~-~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK09792 159 GPFPGSVYHVPYPSDLH-GISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMI 236 (421)
T ss_pred CCCCCCcEEcCCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 122222211100 12 2466777665310 123566666665589999866 88999999999999999999
Q ss_pred EeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHH
Q 046900 238 SDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQ 315 (442)
Q Consensus 238 ~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q 315 (442)
+||++..+.+.+.. .....+.. .++ +.+|||.++ +|+|+||+++ ++.+.+.+.. ....+..+++++
T Consensus 237 ~DEv~tg~gr~G~~-~a~~~~~~-----~pD----i~t~gK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~gnpl~~ 304 (421)
T PRK09792 237 ADEVQSGFARTGKL-FAMDHYAD-----KPD----LMTMAKSLA-GGMPLSGVVG-NANIMDAPAPGGLGGTYAGNPLAV 304 (421)
T ss_pred EeccccCCCCCCch-hHHHhcCC-----CCc----EEEeehhhc-CCCceEEEEE-cHHHHhccCCCCcCCCCCCCHHHH
Confidence 99999998776642 23332211 123 578999998 9999999998 5666655432 223355788888
Q ss_pred HHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh-CCCeeecCCc-eEEEEEecCCccc-ccChhhHHHHHHHHHHc
Q 046900 316 YLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS-AGIECLKGNA-GLFCWMNLSPLLE-EQTREGELALWDSMLHE 392 (442)
Q Consensus 316 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~-g~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~ 392 (442)
.++.+.++-.+. .+++++.+ .+.++.....+.|.+ ++. +..+.| |+++|+++++... .........++..++++
T Consensus 305 aaa~a~l~~l~~-~~~~~~~~-~~g~~l~~~l~~l~~~~p~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~ 381 (421)
T PRK09792 305 AAAHAVLNIIDK-ESLCERAN-QLGQRLKNTLIDAKESVPA-IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQ 381 (421)
T ss_pred HHHHHHHHHHHh-hhHHHHHH-HHHHHHHHHHHHHHHhCCC-cceecccceEEEEEecCCccCCcchHHHHHHHHHHHHC
Confidence 865555542110 12233333 333333333333332 333 233455 8999999974311 01112356788888777
Q ss_pred CcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHH
Q 046900 393 VKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 393 ~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~ 435 (442)
||.+.+.. .....+|+.++. ++++++++++++|.+++.
T Consensus 382 -Gv~i~~~g----~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 382 -GLLLLTCG----AYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred -CcEEeecC----CCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 99986421 124689999874 699999999999999874
No 225
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.86 E-value=9.9e-19 Score=171.91 Aligned_cols=348 Identities=16% Similarity=0.108 Sum_probs=213.1
Q ss_pred CCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCC
Q 046900 41 YEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRA 116 (442)
Q Consensus 41 ~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 116 (442)
|..+.....+||+..+. ..+ .++.+.+.+.++.... ..++.. -..+....+++.+.....
T Consensus 33 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~------------~~~~~~-~~~~~~~~la~~L~~~~~--- 96 (408)
T PRK04612 33 RVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKL------------WHTSNV-FYSAPPLKLAEELVTASR--- 96 (408)
T ss_pred EEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhc------------cccccc-cCCHHHHHHHHHHHhhCC---
Confidence 33345566788886552 333 3355555555443211 111111 112344566666654321
Q ss_pred ccCCCcEEEecChHHHHHHHHHhhcC--------C-CCeEEEcCCCCcChHHhHhhhcCcEEEE---EecCCC---CCCc
Q 046900 117 KFDLNRIVVTAGATAANELLTFILAD--------P-GDALLVPTPYYPGFDRDLRWRTGIKIVP---IHCDSS---NNFQ 181 (442)
Q Consensus 117 ~~~~~~i~~t~G~~~ai~~~~~~l~~--------~-gd~Vl~~~p~y~~~~~~~~~~~G~~v~~---v~~~~~---~~~~ 181 (442)
..+.++++++++++++.+++.... + ...|+....+|.+....+....|..... -|.... -.|
T Consensus 97 --~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~- 173 (408)
T PRK04612 97 --FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF- 173 (408)
T ss_pred --CCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-
Confidence 126899999999999998876431 1 2468888888877644332112211110 011100 011
Q ss_pred CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC--HHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHH
Q 046900 182 ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ--RSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEIL 259 (442)
Q Consensus 182 ~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~--~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~ 259 (442)
.|++.+++.+.. +..+.++..|.+++|.+++ .+.+++|.++|++|++++|+||+|..+...+.. ....
T Consensus 174 ~d~~~l~~~~~~------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~----~a~~ 243 (408)
T PRK04612 174 NDVEALEAAMAG------GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTL----FAHW 243 (408)
T ss_pred CCHHHHHHhhCC------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCch----hhhh
Confidence 267888887742 3456788889888887766 567999999999999999999999986655532 1111
Q ss_pred hhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHH
Q 046900 260 EARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSFTLISSQTQYLLASMLSNKKFTENYIKTNRE 337 (442)
Q Consensus 260 ~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 337 (442)
. .+.+..+.+|||.+| +|+|+||++++ +.+.+.+... ...+..+++++.++.+.|+... + ....+
T Consensus 244 ~------~~~~pdi~t~~K~l~-~G~piga~~~~-~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~---~--~~l~~ 310 (408)
T PRK04612 244 Q------EQVTPDIVTLAKALG-GGFPIGAMLAG-PKVAETMQFGAHGTTFGGNPLAAAVARVALRKLA---S--PQIAA 310 (408)
T ss_pred h------cCCCCCEEEEcchhc-CCCceEEEEEC-HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHH---h--ccHHH
Confidence 1 244566889999998 99999999985 5556555432 2234567888888888876321 1 13344
Q ss_pred HHHHHHHHHHHHHHhC----CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEE
Q 046900 338 RLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRV 413 (442)
Q Consensus 338 ~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRl 413 (442)
.+++.-+++.+.|+++ ++-.....-|+++.+.+..... ..+..+++.+.++ ||.+.|. +...+|+
T Consensus 311 ~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~----~~a~~i~~~l~~~-Gvlv~~~------g~~~lRl 379 (408)
T PRK04612 311 NVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHA----GQAGAILDLAAEH-GLLLLQA------GPDVLRF 379 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchh----hHHHHHHHHHHHC-CeEEeeC------CCCEEEE
Confidence 4455555555555443 3222223445677777642100 1255677777666 9999763 2367999
Q ss_pred Eee-cCCHHHHHHHHHHHHHHHHHHHhhc
Q 046900 414 CFA-NMSEQTLEVALKRIHNFMQKRERRR 441 (442)
Q Consensus 414 s~~-~~~~e~i~~~l~~l~~~l~~~~~~~ 441 (442)
... .++++++++++++|.+++.+..++|
T Consensus 380 ~Ppl~it~eeid~~l~~l~~~l~~~~~~~ 408 (408)
T PRK04612 380 VPALNLTDAELADGLARLRLALADYVAQR 408 (408)
T ss_pred cCCccCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 875 4589999999999999998876654
No 226
>PRK05939 hypothetical protein; Provisional
Probab=99.86 E-value=3.7e-19 Score=174.12 Aligned_cols=155 Identities=18% Similarity=0.197 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcCcEEEEEec
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHC 174 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~ 174 (442)
..|++++|++.+ .+..+++++++.++..++.+++++||+|+++++.|+.... .+. ..|++++.++.
T Consensus 50 ~~lE~~la~leg----------~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~-~~G~~v~~v~~ 118 (397)
T PRK05939 50 AALEAKITKMEG----------GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLR-GLGVEVTMVDA 118 (397)
T ss_pred HHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHH-hcCCEEEEECC
Confidence 488888888764 2334555556899999999999999999999999986543 445 48999988875
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s 254 (442)
.|++++++.+++ ++++|++++|+||||.+. ++++|+++|+++|+++|+|++|+... .+ .
T Consensus 119 -------~d~e~l~~~l~~------~tklV~vesp~NptG~v~---dl~~I~~la~~~gi~livD~t~a~~~----~~-~ 177 (397)
T PRK05939 119 -------TDVQNVAAAIRP------NTRMVFVETIANPGTQVA---DLAGIGALCRERGLLYVVDNTMTSPW----LF-R 177 (397)
T ss_pred -------CCHHHHHHhCCC------CCeEEEEECCCCCCCCHH---hHHHHHHHHHHcCCEEEEECCccccc----cc-C
Confidence 268999998864 889999999999999984 48899999999999999999986321 11 0
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeec
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSY 293 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~ 293 (442)
... .+..+++.|+||.++..|.++|+++++
T Consensus 178 ~~~---------~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 178 PKD---------VGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred ccc---------cCCEEEEecCeecccCCCCeEEEEEec
Confidence 001 145588999999999889999998874
No 227
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.86 E-value=2.4e-19 Score=174.46 Aligned_cols=285 Identities=16% Similarity=0.209 Sum_probs=188.9
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEe
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIH 173 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~ 173 (442)
....+++++++++++ .+++++++|+++++..++.++ ..+||+|+++.++|..+...+.. .|++++.++
T Consensus 18 ~~~~~~~~~la~~~~----------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~~~ 86 (352)
T cd00616 18 PKVREFEKAFAEYLG----------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILL-LGATPVFVD 86 (352)
T ss_pred HHHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHH-cCCeEEEEe
Confidence 357899999999975 356888889999999999988 68999999999999999888884 899999999
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
+++ .++.+|++.+++.+++ ++++|+++ ||+|.+.+ +++|.++|+++++++|+|++|+....... .
T Consensus 87 ~~~-~~~~~d~~~l~~~i~~------~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~~--~ 151 (352)
T cd00616 87 IDP-DTYNIDPELIEAAITP------RTKAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYKG--R 151 (352)
T ss_pred cCC-CcCCcCHHHHHHhcCc------CCeEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeECC--E
Confidence 875 3578999999988753 78888876 46898877 67778888899999999999984221110 0
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCc--ccCCCCCceeEEEeecCHHHHHHHHHcccc-----------------CCCcHHH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLS--KDLGLPGFRVGTIYSYNDKVVTTARRMSSF-----------------TLISSQT 314 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~S--K~~g~~G~RiG~i~~~~~~~~~~~~~~~~~-----------------~~~s~~~ 314 (442)
.+ .. ...+.+.|++ |.++ +.+.|+++++++.+.+.++..... ..++.+.
T Consensus 152 ~~---~~-------~~d~~~~S~~~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (352)
T cd00616 152 KV---GT-------FGDAGAFSFHPTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQ 219 (352)
T ss_pred Ec---cc-------CcceeEEcCCCCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHH
Confidence 11 10 0124556766 9874 345788888666666554432211 0112222
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC-----ceEEEEEecCCcccccChhhHHHHHHH
Q 046900 315 QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGN-----AGLFCWMNLSPLLEEQTREGELALWDS 388 (442)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (442)
..+.... .+.+++..++.+++.+++.+.|.+. |+++..+. ....+.+.++... ..+..++.+.
T Consensus 220 aa~~~~~-------l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~ 288 (352)
T cd00616 220 AAIGLAQ-------LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEA----GESRDELIEA 288 (352)
T ss_pred HHHHHHH-------HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcC----CCCHHHHHHH
Confidence 2211111 1223455566677788888888875 77765432 2233444454310 0135678888
Q ss_pred HHHcCcEEEeCCCCCCCC----------------C-------CCEEEEEee-cCCHHHHHHHHHHHH
Q 046900 389 MLHEVKLNISPGSSCHCS----------------E-------PGWFRVCFA-NMSEQTLEVALKRIH 431 (442)
Q Consensus 389 l~~~~gi~v~pg~~f~~~----------------~-------~~~iRls~~-~~~~e~i~~~l~~l~ 431 (442)
|.++ ||.+.. .+.+. . .+.+||++. ..++++++..++.|+
T Consensus 289 L~~~-gI~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 289 LKEA-GIETRV--HYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHC-CCCeee--ecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 8666 996642 12110 0 157999886 338999999988763
No 228
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.86 E-value=3.2e-19 Score=174.55 Aligned_cols=170 Identities=19% Similarity=0.305 Sum_probs=133.0
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
...+|++++|+|++ .++++.++|+++++.+++.++ +++||+|+++.|+|..+...+.. .|++++.+++
T Consensus 34 ~~~~le~~la~~~g----------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~~-~G~~~v~vd~ 102 (379)
T PRK11658 34 KNQALEQAFCQLTG----------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIVL-LGATPVMVDV 102 (379)
T ss_pred hHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHHH-cCCEEEEEec
Confidence 46899999999986 246888999999999999999 89999999999999999888884 9999999998
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc-CCCCCCCcc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG-SAFSSSEFV 253 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~-~~~~~~~~~ 253 (442)
+. ++|.+|++.+++.+.+ ++|+|+ |+||+|...+ +++|.++|+++|++||+|++|+. ..+.+..
T Consensus 103 ~~-~~~~~d~~~l~~~i~~------~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~-- 167 (379)
T PRK11658 103 DR-DTLMVTPEAIEAAITP------RTKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIEDAAHAVGTYYKGRH-- 167 (379)
T ss_pred CC-CcCCcCHHHHHHhccc------CCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEECCCccCCeECCee--
Confidence 75 3578999999998865 788776 6677999877 67888899999999999999984 2232211
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR 303 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~ 303 (442)
+ .. .+. .+.||++.-.+++.+.|+++.+++.+.+.++.
T Consensus 168 -~---g~------~g~--~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~ 205 (379)
T PRK11658 168 -I---GA------RGT--AIFSFHAIKNITCAEGGLVVTDDDELADRLRS 205 (379)
T ss_pred -c---CC------CCC--EEEeCCCCCcCcccCceEEEECCHHHHHHHHH
Confidence 1 11 122 34566655455777899999877777666554
No 229
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=2.8e-18 Score=170.39 Aligned_cols=360 Identities=13% Similarity=0.089 Sum_probs=206.5
Q ss_pred CCCCCCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+.....+||+..+ .+.++ ++.+.+.+.+.... ...+.......+.+..+|+.+.+..+
T Consensus 33 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~------------~~~~~~~~~~~~~~~~la~~L~~~~p-- 98 (443)
T PRK08360 33 AKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDK------------LIHYTPIYGFPVEPLLLAEKLIEIAP-- 98 (443)
T ss_pred eEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHh------------ccCccccccCcHHHHHHHHHHHHhCC--
Confidence 34444556778888665 33333 35555555544321 11111111224555667777665422
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCCCC--C
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDSSN--N 179 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~~~--~ 179 (442)
..-+.+++++++++|++.+++... .....|+...-+|.+....+....|. .+..+|..... .
T Consensus 99 --~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (443)
T PRK08360 99 --GDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCP 176 (443)
T ss_pred --CCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCcccccc
Confidence 122589999999999999887542 23356777777776653221111221 12222221100 0
Q ss_pred Cc--------CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC-HHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 180 FQ--------ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ-RSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 180 ~~--------~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~-~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
+. -+.+.+++.+.+. ..+.++++|++..-+||+|.+++ .+.+++|.++|++||+++|+||+|..+.+.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~ 255 (443)
T PRK08360 177 FGKEPGSCKMECVEYIKEKFEGE-VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGK 255 (443)
T ss_pred ccCchhhhHHHHHHHHHHHHHhc-cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc
Confidence 11 1133455555421 01246777666633699999887 44699999999999999999999998766554
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--cccCCCcHHHHHHHHHHhcCchhH
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSFTLISSQTQYLLASMLSNKKFT 328 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~ 328 (442)
.+ ......- .+.+ .++||++| +|+|+||+++ ++.+.+.+... ...+..+++.+.++.+.++...
T Consensus 256 ~~-a~~~~~~------~pDi---itlsK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~-- 321 (443)
T PRK08360 256 WF-AIEHFGV------EPDI---ITLGKPLG-GGLPISATIG-RAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIE-- 321 (443)
T ss_pred ch-hhhhcCC------CCCE---EEeccccc-CCceeEEEEE-cHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHH--
Confidence 22 2111111 1223 27799999 9999999999 56666666432 2234567788888877776421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCCccc--ccChhhHHHHHHHHHHcCcEEEeCCCC
Q 046900 329 ENYIKTNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSPLLE--EQTREGELALWDSMLHEVKLNISPGSS 402 (442)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~gi~v~pg~~ 402 (442)
+. ...+.+++.-+++.+.|++ .++......-|+++-+++..... ......+..+...++++ ||.+.+.
T Consensus 322 ~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~-- 395 (443)
T PRK08360 322 EK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWEL-GLIVTFF-- 395 (443)
T ss_pred Hc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHC-CeEEeec--
Confidence 10 1223333333333343332 33222223345666666632110 01112345777788776 9998652
Q ss_pred CCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 403 CHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 403 f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
....+|++.+ .+++++++++++++.+++....++
T Consensus 396 ----~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~~ 430 (443)
T PRK08360 396 ----SGNVLRIQPPLTIEKEVLDEGLDILEEAIEDVEEG 430 (443)
T ss_pred ----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 1356999765 349999999999999999876543
No 230
>PLN02624 ornithine-delta-aminotransferase
Probab=99.85 E-value=1.8e-18 Score=173.31 Aligned_cols=285 Identities=14% Similarity=0.118 Sum_probs=175.9
Q ss_pred CCcEEEecChHHHHHHHHHhhcC---------CCC-eEEEcCCCCcChHHhHhhhcCc------------EEEEEecCCC
Q 046900 120 LNRIVVTAGATAANELLTFILAD---------PGD-ALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDSS 177 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~---------~gd-~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~~ 177 (442)
.+.+++++++++++..+++.... ++. .|+...-+|.+....+....+- .+..++.
T Consensus 132 ~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~--- 208 (474)
T PLN02624 132 YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF--- 208 (474)
T ss_pred CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC---
Confidence 46899999999999998874432 123 5666666776653222101110 0112221
Q ss_pred CCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHH-HHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 178 NNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSV-LEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 178 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~-l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
-|++.+++.++. ...++.+|++..++|++|.+++.++ +++|.++|++||+++|+||+|..+...+..+ ..
T Consensus 209 ----~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~-a~- 279 (474)
T PLN02624 209 ----GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKML-AC- 279 (474)
T ss_pred ----CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchh-hH-
Confidence 267889988864 2346888888888999999988775 9999999999999999999998765554311 11
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHHHhcCch--hHHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLASMLSNKK--FTENYI 332 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~--~~~~~~ 332 (442)
.... .... +.++||.+|.+++++|++++ ++.+...+.... ..+..+++.+.++.+.|+... .+.++.
T Consensus 280 ~~~~-----i~pD---iv~lsK~lggG~~pigav~~-~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~ 350 (474)
T PLN02624 280 DWEE-----VRPD---VVILGKALGGGVIPVSAVLA-DKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLAERS 350 (474)
T ss_pred HhcC-----CCCC---EEEecccccCCCCcceeeee-cHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHH
Confidence 1111 1122 33479999966699999998 455555544322 223467788888877775321 011223
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEE
Q 046900 333 KTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFR 412 (442)
Q Consensus 333 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iR 412 (442)
.++.+.++++.+.+.+.+.. .+....+.|. ++.+.+..... ....+.++++.|.++ ||.+.|+. .+++|
T Consensus 351 ~~~~~~l~~~L~~l~~~~~~-~i~~vrg~G~-~~~i~l~~~~~--~~~~a~~~~~~L~e~-GV~v~p~~------~~~lR 419 (474)
T PLN02624 351 AKLGQELRDQLQKIQKQFPK-LIKEVRGRGL-LNAVVLNSPKL--GPVSAYDVCLKLKER-GLLAKPTH------DTIIR 419 (474)
T ss_pred HHHHHHHHHHHHHHHHhCCC-ceEEEEeeEE-EEEEEecCCCc--ChHHHHHHHHHHHhC-CeEEecCC------CCEEE
Confidence 33333333333333222211 1333334444 44455532110 012356788887665 99998852 46899
Q ss_pred EEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 413 VCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 413 ls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
|++. .++++++++++++|.+++++
T Consensus 420 ~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 420 LAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred EECCccCCHHHHHHHHHHHHHHHHH
Confidence 9864 44899999999999998875
No 231
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.85 E-value=5e-19 Score=172.06 Aligned_cols=280 Identities=15% Similarity=0.153 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----HhhhcCcEEEEEe
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWRTGIKIVPIH 173 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~~G~~v~~v~ 173 (442)
..|++++|++.+ .+++++++|+++|+..++.+++++||+|++++|.|+..... +. ..|+++..++
T Consensus 53 ~~lE~~lA~l~g----------~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~-~~gi~v~~~d 121 (377)
T TIGR01324 53 FALQDAMCELEG----------GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLK-RMGVDITYYD 121 (377)
T ss_pred HHHHHHHHHHhC----------CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHH-hcCcEEEEEC
Confidence 688999998864 46899999999999999999999999999999999876543 23 3788877765
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
.. +.+.+++.+++ ++|+|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+.... ..
T Consensus 122 ~~-------~~e~l~~~i~~------~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~----~~ 181 (377)
T TIGR01324 122 PL-------IGEDIATLIQP------NTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLL----FK 181 (377)
T ss_pred CC-------CHHHHHHhcCC------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCccccc----cC
Confidence 32 22678877754 7899999999999988754 88999999999999999999985332 11
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHH-HccccC-CCcHHHHHHHHHHhcCchhHHH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTAR-RMSSFT-LISSQTQYLLASMLSNKKFTEN 330 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~-~~~~~~-~~s~~~q~~~~~~l~~~~~~~~ 330 (442)
++ .+ +..++++|++|.+| .++...|+++++ +...+.+. .....+ ..++.....+...++.
T Consensus 182 pl-~~---------gaDivv~S~tK~l~G~~d~~gG~v~~~-~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t------ 244 (377)
T TIGR01324 182 PL-EH---------GVDISIQAGTKYLVGHSDIMIGTVVAN-ARTWDQLREHSYLMGQMVDADDAYTTLRGLRT------ 244 (377)
T ss_pred cc-cc---------CceEEEecCceeccCCCCceEEEEEeC-HHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh------
Confidence 11 11 34488999999985 344778998884 44444333 222222 3455444433333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CC-eeec-----------------CCceEEEEEecCCcccccChhhHHHHHHHHHH
Q 046900 331 YIKTNRERLQKRYQMIIEGLRSA-GI-ECLK-----------------GNAGLFCWMNLSPLLEEQTREGELALWDSMLH 391 (442)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~-----------------~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 391 (442)
+..+.++..++...+.+.|+++ .+ +++- ..+| .+.+++... +.+...++.+.| +
T Consensus 245 -l~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~-~~s~~l~~~----~~~~~~~~~~~l-~ 317 (377)
T TIGR01324 245 -LGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSG-LFSFVLQRL----TQKQVHAFLDHL-Q 317 (377)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCc-eEEEEECCC----CHHHHHHHHHhC-C
Confidence 3333455556666677788764 22 1211 1244 344555421 122345666655 3
Q ss_pred cCcEEEeCCCCCCC-----------------CCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 392 EVKLNISPGSSCHC-----------------SEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 392 ~~gi~v~pg~~f~~-----------------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
-.++.+.-|..... ..++.||||++- |+.+.+++.|.++++
T Consensus 318 ~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl---E~~~dl~~dl~~al~ 375 (377)
T TIGR01324 318 LFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL---ENVDDLKADLKAGFE 375 (377)
T ss_pred cceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC---CCHHHHHHHHHHHHh
Confidence 32444333322110 112579999996 346666777777664
No 232
>PLN02509 cystathionine beta-lyase
Probab=99.85 E-value=9e-19 Score=173.21 Aligned_cols=218 Identities=17% Similarity=0.213 Sum_probs=150.4
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----Hhhh
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWR 164 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~ 164 (442)
..|... |. +.++++++++.+..+ .++.++++++++++.+++ .++++||+|+++.|.|+.+... +. .
T Consensus 125 ~~Y~r~-gn-pt~~aLE~~lA~leg------~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~-~ 194 (464)
T PLN02509 125 YDYTRS-GN-PTRDALESLLAKLDK------ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVP-R 194 (464)
T ss_pred CccCCC-CC-HHHHHHHHHHHHHhC------CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHH-H
Confidence 346654 54 468888888877543 567788888889987766 5789999999999999987633 34 3
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|++++.++. .|++++++++.+ ++|+|++++|+||||.+ .++++|+++|+++|+++|+|++|+.
T Consensus 195 ~G~~v~~vd~-------~d~e~l~~ai~~------~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~ 258 (464)
T PLN02509 195 SGVVVKRVNT-------TNLDEVAAAIGP------QTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMS 258 (464)
T ss_pred CCeEEEEeCC-------CCHHHHHHhCCc------CCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccc
Confidence 7998888763 367888888754 78999999999999997 4588999999999999999999875
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASM 321 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~ 321 (442)
... +. ++ .+ +..+++.|++|.++-+| .=.|++++.++.+.+.++..... ...++...+.+..-
T Consensus 259 ~~~-~~---pl-~~---------gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~ 324 (464)
T PLN02509 259 PVL-SR---PL-EL---------GADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRG 324 (464)
T ss_pred ccc-CC---hh-hc---------CCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhh
Confidence 332 11 11 11 23478899999986433 34688877555544443322221 22344443333333
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
|+ .+..+.++..++...+.+.|+++
T Consensus 325 L~-------tL~~R~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 325 IK-------TMALRIEKQQENARKIAMYLSSH 349 (464)
T ss_pred hh-------hHHHHHHHHHHHHHHHHHHHhcC
Confidence 32 24455566677788888888775
No 233
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.85 E-value=6.9e-20 Score=161.68 Aligned_cols=340 Identities=17% Similarity=0.154 Sum_probs=217.8
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCc-ccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEAS-TWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++++|+.| |+++....++.+++..++. .++.|.+...-+.+|.+.+ ..|...||+|.+ .++.++.
T Consensus 67 k~ilnFcaN-nYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iH--k~LE~kiAqfh~----------rED~ily 133 (417)
T KOG1359|consen 67 KKILNFCAN-NYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIH--KLLESKIAQFHG----------REDTILY 133 (417)
T ss_pred cceeeeccc-ccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHH--HHHHHHHHHHhC----------CCceEEe
Confidence 467888865 5554332222222222211 1224555556667776654 678888888865 6778888
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+.+..++..++.++..|.|.|+-+.-.+....+.+++ +. + + -.+|+-.++..+.+..+ .+.|+|+.
T Consensus 134 pscfdANag~feail~pedAvfSDeLNhASIIdGirL-ck-r---y-------~h~dv~~l~~~l~~a~k--~r~klv~T 199 (417)
T KOG1359|consen 134 PSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRL-CK-R---Y-------RHVDVFDLEHCLISACK--MRLKLVVT 199 (417)
T ss_pred ccccccchHHHHHhcChhhhhhccccccchhhhhhHH-Hh-h---h-------ccchhHHHHHHHHHhhh--heEEEEEe
Confidence 8999999999999999999999999999988887774 43 1 0 12567777777665432 35555554
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
..--...|.+.| +++|.+++++||.++++||+|+.+.++... ....+...- +.+..++.++++|++| |.-
T Consensus 200 Dg~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tG-rGt~E~~~v----m~~vdiinsTLgKAlG--ga~ 269 (417)
T KOG1359|consen 200 DGVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETG-RGTAEEFGV----MGDVDIINSTLGKALG--GAS 269 (417)
T ss_pred cceeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCC-CChHHHhCC----CCcceehhhhhhhhhc--CCC
Confidence 455688999999 777888888999999999999988776432 222222221 2356677899999986 333
Q ss_pred eEEEeecCHHHHHHHHHcc-ccCC---CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 287 VGTIYSYNDKVVTTARRMS-SFTL---ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~-~~~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
.||..+| ..++..+++.. ++.. .++.....+.+++. .+.. -.+...+.+.+.+++.+.++..|+.+.....
T Consensus 270 GGyttgp-~~li~llrqr~RpylFSnslppavV~~a~ka~d---llm~-s~~~i~~~~a~~qrfr~~me~aGftIsg~~h 344 (417)
T KOG1359|consen 270 GGYTTGP-KPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYD---LLMV-SSKEIQSRQANTQRFREFMEAAGFTISGASH 344 (417)
T ss_pred CCCccCC-hhHHHHHHhcCCceeecCCCChhhhhhhHHHHH---HHHh-hHHHHHHHHHHHHHHHHHHHhcCceecCCCC
Confidence 4999994 56666776544 3322 22211222222221 1111 1233455667777888888878988765333
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC--CCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC--SEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~--~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~~ 438 (442)
. .+-+-+.+. .-+...+++|++. ||.|.. ..|.. ++...+|+.++. .++|+++++++++.++.+.+.
T Consensus 345 P-I~pv~lGda------~lA~~~ad~lLk~-Gi~Vig-fs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 345 P-ICPVMLGDA------RLASKMADELLKR-GIYVIG-FSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred C-ccceecccH------HHHHHHHHHHHhc-CceEEe-ecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 2 222222221 1367888999998 999984 33332 234568887762 389999999999999877643
No 234
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.85 E-value=1e-18 Score=172.65 Aligned_cols=277 Identities=14% Similarity=0.151 Sum_probs=181.6
Q ss_pred CCcEEEecChHHHHHHHHHhhc----------CCCCeEEEcCCCCcCh-HHhHhhhcCc------------EEEEEecCC
Q 046900 120 LNRIVVTAGATAANELLTFILA----------DPGDALLVPTPYYPGF-DRDLRWRTGI------------KIVPIHCDS 176 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~----------~~gd~Vl~~~p~y~~~-~~~~~~~~G~------------~v~~v~~~~ 176 (442)
.+.+++++++++++..+++.+. ...+.|+...-+|.+. ...+.. .|- .+..++.
T Consensus 94 ~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-- 170 (401)
T TIGR01885 94 YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISM-STDPDSRTNFGPYVPGFKKIPY-- 170 (401)
T ss_pred CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhC-cCCcccccccCCCCCCceEeCC--
Confidence 3689999999999999988752 2235777778787753 333332 221 1222221
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHH-HHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccH
Q 046900 177 SNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRS-VLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSI 255 (442)
Q Consensus 177 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~-~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~ 255 (442)
.|++.|++.+++. +.++.++++..+++++|.+.+.+ .+++|.++|++|++++|+||+|..+.+.+..+ +.
T Consensus 171 -----~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~ 241 (401)
T TIGR01885 171 -----NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CV 241 (401)
T ss_pred -----CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HH
Confidence 2689999988653 23667777777799999988655 59999999999999999999998765545321 11
Q ss_pred HHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc-c-ccCCCcHHHHHHHHHHhcCchhHHHHHH
Q 046900 256 AEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM-S-SFTLISSQTQYLLASMLSNKKFTENYIK 333 (442)
Q Consensus 256 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~-~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 333 (442)
+... ....++ ++||.++..|+|+|++++ ++.+.+.++.. . ..+..+++.+.++.+.|+... +.
T Consensus 242 -~~~~-----~~~di~---~~gK~l~~g~~~ig~v~~-~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~--~~--- 306 (401)
T TIGR01885 242 -DHEN-----VKPDIV---LLGKALSGGVYPVSAVLA-DDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLE--EE--- 306 (401)
T ss_pred -hhcC-----CCCCEE---EeeccccCCCCCcEEEEE-cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH--hc---
Confidence 1111 012232 578999865699999999 46666665431 1 123456888888877775321 11
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCee---ecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCE
Q 046900 334 TNRERLQKRYQMIIEGLRSAGIEC---LKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGW 410 (442)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~~g~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~ 410 (442)
...++.++..+++.+.|++++..+ ..+.|. +..+.++.... .....+++..|.++ ||.+.|+. ++.
T Consensus 307 ~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~-~~~i~~~~~~~---~~~~~~l~~~l~~~-Gv~v~~~~------~~~ 375 (401)
T TIGR01885 307 KLAENAEKLGEIFRDQLKKLPKPIITEVRGRGL-LNAIVIDESKT---GRTAWDLCLKLKEK-GLLAKPTH------GNI 375 (401)
T ss_pred cHHHHHHHHHHHHHHHHHhccCCceeEEeecCe-eEEEEeccCcc---hhHHHHHHHHHHhC-CEEEEecC------CCE
Confidence 233455666788888888764333 234454 44344433110 01357888888766 99998742 468
Q ss_pred EEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 411 FRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 411 iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
+|+++. .++++++++++++|.+++
T Consensus 376 lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 376 IRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred EEEeCCccCCHHHHHHHHHHHHHHh
Confidence 999985 448999999999999875
No 235
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=2.8e-18 Score=169.81 Aligned_cols=357 Identities=12% Similarity=0.072 Sum_probs=211.4
Q ss_pred CCCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+...+.+||+..+. ..+ .++.+.+.+.+...... ...+. ....+....+|+.+......
T Consensus 32 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~----------~~~~~--~~~~~~~~~la~~l~~~~p~- 98 (421)
T PRK06777 32 ATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFT----------HTAYQ--IVPYASYVTLAERINALAPI- 98 (421)
T ss_pred CEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcc----------ccccc--ccCChHHHHHHHHHHHhCCC-
Confidence 444455567788986553 223 23455555554432110 01111 01123445566666543210
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCcE-------------EEEEecCCC-CC
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGIK-------------IVPIHCDSS-NN 179 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~~-------------v~~v~~~~~-~~ 179 (442)
-..+.+++++++++|++.+++... .....|+...-+|.+....+....|.. +..++.... .+
T Consensus 99 --~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 176 (421)
T PRK06777 99 --DGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHG 176 (421)
T ss_pred --CCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccC
Confidence 113689999999999998877542 223568888888877654332112210 111111110 00
Q ss_pred --CcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 180 --FQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 180 --~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
..-+++.+++.+.+.. ...++.++++....++.|. +.+.+.+++|.++|++||+++|.||+|..+.+.+. +.+..
T Consensus 177 ~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~-~~~~~ 254 (421)
T PRK06777 177 VSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGK-LFAME 254 (421)
T ss_pred cCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCc-hhhhh
Confidence 0112556777665310 1235555555544678885 57889999999999999999999999998766663 22222
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--cccCCCcHHHHHHHHHHhcCchhHHHHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSFTLISSQTQYLLASMLSNKKFTENYIKT 334 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 334 (442)
.+.. ... +.++||.++ +|+|+||+++ ++.+.+.+... ...+..+++++.++.+.|+.. ++ ..
T Consensus 255 ~~~~------~pD---iv~~sK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~---~~--~~ 318 (421)
T PRK06777 255 YYDV------KPD---LITMAKSLG-GGMPISAVVG-RAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVI---AE--EK 318 (421)
T ss_pred hcCC------CCC---EEeeehhhc-CCCceEEEEE-cHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHH---Hh--cc
Confidence 2211 122 237999998 9999999999 56666665432 223556889999988888632 11 24
Q ss_pred HHHHHHHHHHHHHHHHHhC----C-CeeecCCceEEEEEecCCcc-cccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCC
Q 046900 335 NRERLQKRYQMIIEGLRSA----G-IECLKGNAGLFCWMNLSPLL-EEQTREGELALWDSMLHEVKLNISPGSSCHCSEP 408 (442)
Q Consensus 335 ~~~~~~~~~~~l~~~L~~~----g-~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~ 408 (442)
..+.++++.+++.+.|++. + +....+.|.+|. +.+.... .....+....+...++++ ||.+.|+..|+
T Consensus 319 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~-i~~~~~~~~~~~~~~~~~l~~~~~~~-Gv~i~~~~~~g---- 392 (421)
T PRK06777 319 LCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVA-VEFNDPQTGKPSPEFTRQYQRQALEE-GLLLLSCGVHG---- 392 (421)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEE-EEEecCccCCccHHHHHHHHHHHHhC-CeEEeecCCCC----
Confidence 5556666667777766653 2 334557777665 3332210 001111244555666665 99999987663
Q ss_pred CEEEEEee-cCCHHHHHHHHHHHHHHHH
Q 046900 409 GWFRVCFA-NMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 409 ~~iRls~~-~~~~e~i~~~l~~l~~~l~ 435 (442)
+++||++. .++++++++++++|.+++.
T Consensus 393 ~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 393 NVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 58999986 4589999999999998874
No 236
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.84 E-value=1.3e-18 Score=172.69 Aligned_cols=347 Identities=13% Similarity=0.103 Sum_probs=205.6
Q ss_pred CCCCCceeeeeccc--cc--ccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLAE--NQ--VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~~--n~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+||+..+. .. ++++.+.+.+.+..... ...|....+..+|.+.+++.+ . .
T Consensus 46 d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~-----------~~~~~~~~~~~~la~~L~~~~----~-----~ 105 (426)
T PRK00062 46 DVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG-----------LSFGAPTELEVELAELVIELV----P-----S 105 (426)
T ss_pred eCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC-----------CcCCCCCHHHHHHHHHHHHhC----C-----C
Confidence 34566788998764 22 23455555444433210 112223334445555555442 1 2
Q ss_pred CCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcEEE----------EEecCCCCCC---cCCH
Q 046900 120 LNRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIKIV----------PIHCDSSNNF---QITP 184 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~v~----------~v~~~~~~~~---~~d~ 184 (442)
.+.+++++++++|+..+++.... .++.|+..+++|.++...+....|.... ..+.. .+.+ ..|+
T Consensus 106 ~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~ 184 (426)
T PRK00062 106 IEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFA-KHTLTAPYNDL 184 (426)
T ss_pred CCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccc-cceEEcCCCCH
Confidence 56899999999999999887533 3578999999999976433211111000 00000 0000 1368
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC-HHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhc
Q 046900 185 QALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ-RSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQ 263 (442)
Q Consensus 185 ~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~-~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~ 263 (442)
+.+++.+.+. ..++.+|++..-...+|.+.+ .+.+++|.++|++|++++|+||+|..+.. +..+ ..+...-
T Consensus 185 ~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~-g~~~--~~~~~~~-- 256 (426)
T PRK00062 185 EAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV-ALGG--AQGYYGV-- 256 (426)
T ss_pred HHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcccc-CCcc--HHHHhCC--
Confidence 8898888642 235666666533444888876 77799999999999999999999997633 3211 1111110
Q ss_pred CCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc---c--ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 046900 264 YKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM---S--SFTLISSQTQYLLASMLSNKKFTENYIKTNRER 338 (442)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~---~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 338 (442)
.++ +.+|||.++ .|+++|++++ ++.+.+.+... . +.+..+++.+.++.+.|+...- ++..++.++.
T Consensus 257 --~pD----i~~~gK~l~-~G~p~ga~~~-~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~~~~~~~~~~ 327 (426)
T PRK00062 257 --TPD----LTTLGKIIG-GGLPVGAFGG-RREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE-PGFYEELEAL 327 (426)
T ss_pred --Ccc----hHhhhhHhh-CCCcceeeeE-HHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc-chHHHHHHHH
Confidence 112 468999998 8999999988 56677766421 1 1235678888887777763221 1234444444
Q ss_pred HHHHHHHHHHHHHhCCCeeec-CCceEEEEEecCCccc-------ccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCE
Q 046900 339 LQKRYQMIIEGLRSAGIECLK-GNAGLFCWMNLSPLLE-------EQTREGELALWDSMLHEVKLNISPGSSCHCSEPGW 410 (442)
Q Consensus 339 ~~~~~~~l~~~L~~~g~~~~~-~~~g~~~~~~~~~~~~-------~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~ 410 (442)
....++.+.+.+.+.++.... +.|. ++-+.+..... ......+..+...|+++ ||.+.|.. + +.
T Consensus 328 ~~~~~~~l~~~~~~~~~~~~vrg~G~-~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~-Gv~v~~~~-~-----~~ 399 (426)
T PRK00062 328 TKRLAEGLKEAAKKAGIPLTVNRVGS-MFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDE-GVYLAPSQ-F-----EA 399 (426)
T ss_pred HHHHHHHHHHHHHHcCCceEEEEecc-eEEEEEecCCCcchhhhccccHHHHHHHHHHHHHC-CeEeecCC-c-----Cc
Confidence 555555555555556655433 4444 44444432100 00111245778888776 99998742 1 24
Q ss_pred EEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 411 FRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 411 iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+++++.. +++++++++++|.+++.++
T Consensus 400 ~~~~~~~-t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 400 GFVSAAH-TDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred eeeeccC-CHHHHHHHHHHHHHHHHhh
Confidence 6777654 8999999999999998753
No 237
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.84 E-value=3.7e-18 Score=151.94 Aligned_cols=355 Identities=18% Similarity=0.282 Sum_probs=243.7
Q ss_pred CCCCCCCCCceeeeecccccc----c--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhC
Q 046900 40 PYEESTNPSGVIQMGLAENQV----S--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRG 113 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~n~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~ 113 (442)
.|..+..|..+ ||+++.-.. | .+.+++.-....... .-++.|-|..|++.++++.++.+-....
T Consensus 23 ~y~~d~~p~Kv-nL~igAYRtd~g~PWvLPvVk~~e~~i~~d~---------s~NHEYLpi~Gl~~F~~~A~el~lg~~s 92 (410)
T KOG1412|consen 23 SYGEDLDPVKV-NLGIGAYRTDDGKPWVLPVVKKAEKKIANDQ---------SLNHEYLPILGLPTFTKAATELLLGADS 92 (410)
T ss_pred HhcccCCccee-ecccceEEcCCCCeeEehhhhhhhhhccCch---------hccchhccccCchhhhhhhHHHhcCCCc
Confidence 34555555554 888775321 2 244443322222111 2246799999999999999987643211
Q ss_pred CCCccCCCcE--EEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcC-cEEEEEecCCCCCCcCCHHHHH
Q 046900 114 GRAKFDLNRI--VVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTG-IKIVPIHCDSSNNFQITPQALE 188 (442)
Q Consensus 114 ~~~~~~~~~i--~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G-~~v~~v~~~~~~~~~~d~~~l~ 188 (442)
..+..+.+ +-+-+++.|+.+....|.. +...|.+.+|+|......++. .| ..+..++.-..+.-.+|.+.+.
T Consensus 93 --~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~-aGf~tv~~Y~yWd~~~k~~d~e~~L 169 (410)
T KOG1412|consen 93 --PAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEK-AGFTTVATYPYWDAENKCVDLEGFL 169 (410)
T ss_pred --hhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHH-cCCceeeeeeeecCCCceecHHHHH
Confidence 11233432 3344677888877655521 346799999999999999985 88 4556666655556678999998
Q ss_pred HHHHHHHhcCCceeEEEEeCC-CCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC--cccHHHHHhhhcCC
Q 046900 189 AAYKEAESKDMRVRGVLITNP-SNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE--FVSIAEILEARQYK 265 (442)
Q Consensus 189 ~~l~~~~~~~~~~~~v~l~~P-~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~--~~s~~~~~~~~~~~ 265 (442)
..|+... .-..+++..+ +||||.-.+.|++.+|++..++.+.+.+.|-+|..|.-++.. ...+..+..+
T Consensus 170 sdl~~AP----e~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~---- 241 (410)
T KOG1412|consen 170 SDLESAP----EGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQ---- 241 (410)
T ss_pred HHHhhCC----CCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhc----
Confidence 8887632 2224455555 899999999999999999999999999999999997754322 2223334433
Q ss_pred CCCcEEEEecCcccCCCCCceeEEEe--ecCHHHHHHHHHc------cccCCCcHHHHHHHHHHhcCchhHHHH---HHH
Q 046900 266 DSERVHIVYSLSKDLGLPGFRVGTIY--SYNDKVVTTARRM------SSFTLISSQTQYLLASMLSNKKFTENY---IKT 334 (442)
Q Consensus 266 ~~~~vi~~~S~SK~~g~~G~RiG~i~--~~~~~~~~~~~~~------~~~~~~s~~~q~~~~~~l~~~~~~~~~---~~~ 334 (442)
...++++.||+|.||+.+-|+|-+. ..++.++..+... ......+.....++...|+.++..++| ++.
T Consensus 242 -g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~ 320 (410)
T KOG1412|consen 242 -GFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKT 320 (410)
T ss_pred -CCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHH
Confidence 2457889999999999999999753 4455555443321 122334456777889999998876666 445
Q ss_pred HHHHHHHHHHHHHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCE
Q 046900 335 NRERLQKRYQMIIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGW 410 (442)
Q Consensus 335 ~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~ 410 (442)
+..++++.|..|.+.|..++ |+.+..+-|||-+-.+.. .-.+.|.+++.|.+.+ +|
T Consensus 321 MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp-----------~qV~~li~~h~vyLl~--------~G- 380 (410)
T KOG1412|consen 321 MSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTP-----------AQVDHLIENHKVYLLS--------DG- 380 (410)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCH-----------HHHHHHHHhceEEEec--------CC-
Confidence 67788899999999988873 555567889888765543 3457788888999876 34
Q ss_pred EEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 411 FRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 411 iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
||+++.++...++...++|.+.++..
T Consensus 381 -RInisGLN~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 381 -RINISGLNMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred -cEeeeccccccHHHHHHHHHHHHHhh
Confidence 89998777777888888888877654
No 238
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=3.4e-18 Score=165.86 Aligned_cols=212 Identities=14% Similarity=0.153 Sum_probs=143.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----HhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~~G~~v~~v 172 (442)
..+.++++++.+....+ ..+.+ +++++++|+..++.+++++||+|+++.|.|+++... ++ ..|+++..+
T Consensus 62 gnPt~~~Le~~la~le~-----~~~~v-~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~-~~Gi~v~~v 134 (395)
T PRK05967 62 GTPTTDALCKAIDALEG-----SAGTI-LVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLK-RLGVEVEYY 134 (395)
T ss_pred CChHHHHHHHHHHHHhC-----CCCEE-EECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHH-hcCeEEEEe
Confidence 35666666666654322 23444 555578999999999999999999999999987653 35 489998887
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+.+ +.+.+++++++ ++|+|++++|+||++.+ .++++|+++|+++|+++|+|++|+...+
T Consensus 135 d~~-------~~e~l~~al~~------~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~----- 193 (395)
T PRK05967 135 DPE-------IGAGIAKLMRP------NTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLY----- 193 (395)
T ss_pred CCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCcee-----
Confidence 532 34778888765 78999999999997654 5699999999999999999999985321
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHHcc-cc-CCCcHHHHHHHHHHhcCchhHH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMS-SF-TLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~-~~-~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
.....+ +--+++.|.+|.++ -.++-.|+++. ++.+.+.+.... .. ..+++...+.+..-+++
T Consensus 194 ~~pl~~---------GaDivv~S~tKy~~Gh~d~~~G~v~~-~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T----- 258 (395)
T PRK05967 194 FRPLDF---------GVDISIHAATKYPSGHSDILLGTVSA-NEKCWPQLLEAHGTLGLCAGPDDTYQILRGLRT----- 258 (395)
T ss_pred cChhHc---------CCCEEEEecccccCCCCCeeEEEEEc-CHHHHHHHHHHHHHcCCCCCHHHHHHHHcCccc-----
Confidence 122223 33388999999864 34577887776 444433333221 22 23455554444444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+.-+.++..++...+.+.|+++
T Consensus 259 --l~lR~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 259 --MGIRLEHHRKSALEIARWLEGR 280 (395)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhC
Confidence 2233344456666777888775
No 239
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.84 E-value=1.2e-18 Score=170.52 Aligned_cols=284 Identities=24% Similarity=0.305 Sum_probs=195.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCC-CcEEEecChHHHHHHHHHhh---cCCCCeEEEcCCCCcChH----HhHhhhcCcE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDL-NRIVVTAGATAANELLTFIL---ADPGDALLVPTPYYPGFD----RDLRWRTGIK 168 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~-~~i~~t~G~~~ai~~~~~~l---~~~gd~Vl~~~p~y~~~~----~~~~~~~G~~ 168 (442)
..+.|+.++++++ +++ ++|++++|++.++..++.++ .++||+|++..-.|+... ...+ +.|++
T Consensus 45 ~~~~r~~la~~lg--------~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-~~g~~ 115 (371)
T PF00266_consen 45 LEEAREALAKLLG--------APPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAK-RKGAE 115 (371)
T ss_dssp HHHHHHHHHHHHT--------SSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHH-HTTEE
T ss_pred HHHHHHHHHHhcC--------Cccccccccccccchhhhhhhhccccccccccccccccccccccccccccccc-cchhh
Confidence 4577777777775 567 79999999999999999999 789999999998887765 2233 47999
Q ss_pred EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 169 v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
+..++.+.++ .+|++.+++.+.+ ++++++++..+|-||..++ +++|.++|+++++++++|.+++-..
T Consensus 116 v~~i~~~~~~--~~~~~~~~~~l~~------~~~lv~~~~~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~g~-- 182 (371)
T PF00266_consen 116 VRVIPADPGG--SLDLEDLEEALNP------DTRLVSISHVENSTGVRNP---IEEIAKLAHEYGALLVVDAAQSAGC-- 182 (371)
T ss_dssp EEEEEEGTTS--SCSHHHHHHHHHT------TESEEEEESBETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTTTTT--
T ss_pred hccccccccc--hhhhhhhhhhhcc------ccceEEeecccccccEEee---eceehhhhhccCCceeEechhcccc--
Confidence 9999987644 4789999999975 8999999999999999999 7788899999999999999998422
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc---------------------c
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS---------------------F 307 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~---------------------~ 307 (442)
....+..+ +--+++.|..|.+|.+| +|+++.+ +...+.++.... +
T Consensus 183 --~~id~~~~---------~~D~~~~s~~Kl~gp~G--~g~l~v~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (371)
T PF00266_consen 183 --VPIDLDEL---------GADFLVFSSHKLGGPPG--LGFLYVR-PEAIERLRPAKPGGGYLDFPSLQEYGLADDARRF 248 (371)
T ss_dssp --SS--TTTT---------TESEEEEESTSTTSSST--EEEEEEE-HHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGS
T ss_pred --cccccccc---------ccceeeecccccCCCCc--hhhheeh-hhhhhccccccccccccccccchhcccccccccc
Confidence 11222222 33367899999555555 7999985 444444432111 1
Q ss_pred --CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec----CCceEEEEEecCCcccccChh
Q 046900 308 --TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK----GNAGLFCWMNLSPLLEEQTRE 380 (442)
Q Consensus 308 --~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~----~~~g~~~~~~~~~~~~~~~~~ 380 (442)
++.+.+...++...++.. .+.-+++.+++..+..+++.+.|.+. ++.+.. ...+-.+.+.++..
T Consensus 249 ~~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~------- 319 (371)
T PF00266_consen 249 EGGTPNVPAIYALNEALKLL--EEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGS------- 319 (371)
T ss_dssp SSSS--HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTS-------
T ss_pred cccceeeehhhhHHHHHhhh--hccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCC-------
Confidence 122333333334444321 12335666778888888999999887 445433 22233455555442
Q ss_pred hHHHHHHHHHHcCcEEEeCCCCCCC------CCCCEEEEEeecC-CHHHHHHH
Q 046900 381 GELALWDSMLHEVKLNISPGSSCHC------SEPGWFRVCFANM-SEQTLEVA 426 (442)
Q Consensus 381 ~~~~l~~~l~~~~gi~v~pg~~f~~------~~~~~iRls~~~~-~~e~i~~~ 426 (442)
+..++.+.|.++ ||.+..|..+.. ...+.+|+|+... +++|++++
T Consensus 320 ~~~~~~~~L~~~-~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 320 DADDVVKYLEER-GIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp SHHHHHHHHHHH-TEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred CHHHHHHHHhhc-CEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 357788888777 999999876541 1137899999732 78888864
No 240
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.84 E-value=3.4e-18 Score=167.85 Aligned_cols=295 Identities=13% Similarity=0.140 Sum_probs=187.2
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEe
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIH 173 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~ 173 (442)
....++|+++++|++ .++.++++|+++++.+++.++ +++||.|+++.|+|..+...+.. .|++++.++
T Consensus 29 ~~~~~le~~la~~~g----------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~-~G~~~~~~~ 97 (380)
T TIGR03588 29 PTVPAFEEALAEYVG----------AKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALY-CGAKVDFVD 97 (380)
T ss_pred hhHHHHHHHHHHHHC----------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHH-cCCEEEEEe
Confidence 356899999999986 234566778899999999998 78999999999999999888884 899999999
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC-CCCCCc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA-FSSSEF 252 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~-~~~~~~ 252 (442)
++++ ++.+|++.+++.+++. ...++++|+++ |++|...+ +++|.++|+++|++||+|++++... +++...
T Consensus 98 ~~~~-~~~~d~~~l~~~i~~~--~~~~t~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~ 168 (380)
T TIGR03588 98 IDPD-TGNIDEDALEKKLAAA--KGKLPKAIVPV---DFAGKSVD---MQAIAALAKKHGLKIIEDASHALGAEYGGKPV 168 (380)
T ss_pred cCCC-cCCcCHHHHHHHhhcc--cCCCceEEEEe---CCCCccCC---HHHHHHHHHHcCCEEEEECCCcccCccCCEeC
Confidence 8753 4779999999998731 01267877754 56898776 7888888999999999999998532 333221
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCc--ccCCCCCceeEEEeecCHHHHHHHHHccccC----------------------
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLS--KDLGLPGFRVGTIYSYNDKVVTTARRMSSFT---------------------- 308 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~S--K~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~---------------------- 308 (442)
.+ ... . .+.+.|++ |.++. | ..|+++..++.+.+.++.....+
T Consensus 169 g~-~~~---------~-d~~~~S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 235 (380)
T TIGR03588 169 GN-CRY---------A-DATVFSFHPVKIITT-A-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQE 235 (380)
T ss_pred CC-ccc---------c-ceEEEecCCCCcccc-c-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeec
Confidence 11 001 1 24566765 88853 3 57888887777776655322111
Q ss_pred -----CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC-C---ceEEE-EEecCCccccc
Q 046900 309 -----LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKG-N---AGLFC-WMNLSPLLEEQ 377 (442)
Q Consensus 309 -----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~---~g~~~-~~~~~~~~~~~ 377 (442)
.++.+.......-|+ .+.+..++-+++.+++.+.|.+. ++....+ . .++++ .+.++.. ..
T Consensus 236 ~g~n~~m~~l~aa~g~~qL~-------~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~- 306 (380)
T TIGR03588 236 LGFNYRMTDIQAALGLSQLK-------KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQE-FG- 306 (380)
T ss_pred cccccCccHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCc-CC-
Confidence 011111111111121 13444445555666777777765 3443222 1 12222 2233221 00
Q ss_pred ChhhHHHHHHHHHHcCcEEEeCCCCC-------C---CC--CC-------CEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 378 TREGELALWDSMLHEVKLNISPGSSC-------H---CS--EP-------GWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 378 ~~~~~~~l~~~l~~~~gi~v~pg~~f-------~---~~--~~-------~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
.+..++.+.|.++ ||.++..-.. . .. -+ ..++|.+. .+++++++..++.|++++
T Consensus 307 --~~r~~l~~~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 307 --CTRKEVFEALRAA-GIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred --CCHHHHHHHHHHC-CCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 1356778887555 9988643210 0 00 01 34777654 458999999999998764
No 241
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.84 E-value=2.1e-18 Score=168.18 Aligned_cols=208 Identities=18% Similarity=0.235 Sum_probs=138.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH----hHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR----DLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~G~~v~~v 172 (442)
...|++++|++.+ ....+++++| +.++.+++ .++++||+|++++|.|+.... .+. ..|+++..+
T Consensus 52 ~~~Le~~la~l~g---------~~~al~~~SG-~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~-~~gi~v~~v 119 (380)
T PRK06176 52 RFALEELIADLEG---------GVKGFAFASG-LAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLV-KNGLSCTII 119 (380)
T ss_pred HHHHHHHHHHHhC---------CCCEEEECCH-HHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHH-hcCeEEEEc
Confidence 5788888888865 1233555555 66888776 467999999999999976533 334 378888877
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+. .|++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++++++|+|++|+...+. .
T Consensus 120 d~-------~d~e~l~~ai~~------~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~-- 180 (380)
T PRK06176 120 DT-------SDLSQIKKAIKP------NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-N-- 180 (380)
T ss_pred CC-------CCHHHHHHhcCc------CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-C--
Confidence 64 378899988764 7899999999999999988 778888899999999999999864332 1
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
++ .. +..+++.|++|.++.+| .-.|++++.++.+.+.++..... ...++...+.+..-++.
T Consensus 181 -p~-~~---------gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~t----- 244 (380)
T PRK06176 181 -PL-LL---------GADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKT----- 244 (380)
T ss_pred -cc-cc---------CCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccCc-----
Confidence 11 11 22378899999997555 45677777555665555443333 12344444433333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+..+.++..++...+.+.|++.
T Consensus 245 --l~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 245 --LGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhC
Confidence 1222233334555666667654
No 242
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.83 E-value=8e-18 Score=166.30 Aligned_cols=340 Identities=13% Similarity=0.086 Sum_probs=198.1
Q ss_pred ceeeeecccccccHHHHHHHHHhC-CCCcccCCCCCCCCcccccCCCcchHHHHH----HHHHHHHHHhCCCCccCCCcE
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQ-PEASTWGKGAPGFRENALFQDYHGLKSFRQ----AMASFMEQIRGGRAKFDLNRI 123 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~----~ia~~l~~~~~~~~~~~~~~i 123 (442)
..|+|-..+|.+.+.. .+.+... ... .|... .....|....-..+|.+ .++++++ .+..
T Consensus 29 ~~~~l~~sen~~~p~v-~~a~~~~~~~~----~~~g~-~gsr~~~G~~~~~~lE~~~~~~la~l~g----------~~~a 92 (416)
T PRK13034 29 DHLELIASENFTSPAV-MEAQGSVLTNK----YAEGY-PGKRYYGGCEFVDEVEALAIERAKQLFG----------CDYA 92 (416)
T ss_pred cCeeecccccCCCHHH-HHHhcchhhcC----CCCCC-CCCcccCCChHHHHHHHHHHHHHHHHhC----------CCce
Confidence 4578888888875443 3333322 111 11100 00111211223456666 6666654 3345
Q ss_pred -EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcCh-HHhHhhh-cCcEE--EEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 124 -VVTAGATAANELLTFILADPGDALLVPTPYYPGF-DRDLRWR-TGIKI--VPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 124 -~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~-~~~~~~~-~G~~v--~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
+.+++++.|+..++.+++++||.|+++..+|.+. ...++.. .+... +.++++.. .+.+|++++++.++..
T Consensus 93 lv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~---- 167 (416)
T PRK13034 93 NVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEH---- 167 (416)
T ss_pred EEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhc----
Confidence 4467889999999999999999999999998762 2222210 12211 24444332 4568999999988642
Q ss_pred CceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcc
Q 046900 199 MRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSK 278 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK 278 (442)
++|+|+++.+.+ |...+ +.+|.++|+++|+++|+|++++...+....... .+ ....++++|++|
T Consensus 168 -~~klVi~~~~~~--g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~--~~--------~~~Di~~~s~~K 231 (416)
T PRK13034 168 -KPKLIIAGFSAY--PRELD---FARFREIADEVGALLMVDMAHIAGLVAAGEHPN--PF--------PHAHVVTTTTHK 231 (416)
T ss_pred -CCeEEEECCCcc--ccccC---HHHHHHHHHHcCCEEEEeCcccccCcccCCCCC--CC--------CCceEEEEeCcc
Confidence 567777766554 55555 777788899999999999998864443211110 00 123477899999
Q ss_pred cCCCCCceeEEEeecCHHHHHHHHHccccC--C-CcHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 046900 279 DLGLPGFRVGTIYSYNDKVVTTARRMSSFT--L-ISSQTQYLLA-SMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG 354 (442)
Q Consensus 279 ~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~--~-~s~~~q~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 354 (442)
.++.+ ..|++++.++.+...++.....+ . ..++...++. +++. .......+.++++.++.+++.+.|.+.|
T Consensus 232 ~l~g~--~GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~---~~~~~~~~~~~~l~~~a~~l~~~L~~~G 306 (416)
T PRK13034 232 TLRGP--RGGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGE---ALQPEFKTYAKQVIANAQALAEVLKERG 306 (416)
T ss_pred cCCCC--CCeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHH---HhChhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 98323 24888886666665555432221 1 1122222222 2222 1111123457888899999999998889
Q ss_pred CeeecC-CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCC----CCCCCEEEEEeec-----CCHHHHH
Q 046900 355 IECLKG-NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCH----CSEPGWFRVCFAN-----MSEQTLE 424 (442)
Q Consensus 355 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~----~~~~~~iRls~~~-----~~~e~i~ 424 (442)
+++..+ ..+..+++.+..... +...+.+.| +++||.+.+-...+ +..+..+|+++.. .++++++
T Consensus 307 ~~~~~~~~~t~i~~v~~~~~~~-----~~~~~~~~L-~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~ 380 (416)
T PRK13034 307 YDLVSGGTDNHLLLVDLRPKGL-----SGKDAEQAL-ERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFR 380 (416)
T ss_pred CEeccCCCCCcEEEEEcCCCCC-----CHHHHHHHH-HhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHH
Confidence 887642 223355666543211 133444555 55599987421110 1124569998642 3689999
Q ss_pred HHHHHHHHHHHH
Q 046900 425 VALKRIHNFMQK 436 (442)
Q Consensus 425 ~~l~~l~~~l~~ 436 (442)
++++.|.+++.+
T Consensus 381 ~l~~~l~~~~~~ 392 (416)
T PRK13034 381 EIANWILDVLDD 392 (416)
T ss_pred HHHHHHHHHHhc
Confidence 999999988773
No 243
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.83 E-value=9.2e-18 Score=164.28 Aligned_cols=310 Identities=15% Similarity=0.144 Sum_probs=201.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCC-CcEEEecChH-HHHHHHHHhhcC---CCCeEEEcCCCCcChHHhHhhhcCcEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDL-NRIVVTAGAT-AANELLTFILAD---PGDALLVPTPYYPGFDRDLRWRTGIKIVP 171 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~-~~i~~t~G~~-~ai~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~ 171 (442)
...+.+.+...+.+..| ++. ...++++|+| .++.+++.++-. +||.|+++.-+|.....++.. .|++++.
T Consensus 103 ~~~l~~~~e~~~~~~~G----~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~-~G~~pv~ 177 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLG----LRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAIST-AGFEPRV 177 (444)
T ss_pred HHHHHHHHHHHHHHHcC----CCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHH-cCCeEEE
Confidence 45556666666665555 222 4688888888 688877777642 589999999999999999885 9999999
Q ss_pred Eec-CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 172 IHC-DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 172 v~~-~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
++. .+++.|.+|++.|+++|++. +.+..++++++|+ |+.....+++++|.++|++||+++|+|++|+...
T Consensus 178 Vd~~~d~~~~~iD~e~Le~aIt~~---~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~---- 248 (444)
T TIGR03531 178 IETVLDGDELTTDVEDIERAIEEI---GPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQS---- 248 (444)
T ss_pred eeeeecCcCCCcCHHHHHHHHHhc---cCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcC----
Confidence 995 23457999999999999852 2244566777665 5555556779999999999999999999998411
Q ss_pred CcccHHHHHhhhcCCCCC-cEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHH
Q 046900 251 EFVSIAEILEARQYKDSE-RVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~-~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
.....+... +. ..+ -.+++.|++|.+.+||+ .|.++++++.+.+.+.........+++.|.+...++.-+ .
T Consensus 249 --~~~~~~~~~-g~-~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G---~ 320 (444)
T TIGR03531 249 --NKYMELINK-AI-KVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLG---S 320 (444)
T ss_pred --hhhhhhhhc-cc-cccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhC---H
Confidence 111112110 00 011 14567899999987776 344446677777777654333334456777777766532 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC----CCeeecC-CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEE----EeCC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSA----GIECLKG-NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLN----ISPG 400 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~----v~pg 400 (442)
+.++++.++..++++++.+.|.+. |.++... ....-+.+.+..... .+...+-..|..+ +|. |.||
T Consensus 321 ~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~----~~~~~~g~~l~~~-~v~g~r~v~~~ 395 (444)
T TIGR03531 321 KGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKG----KDPTMLGSMLYSR-RVTGPRVVTNG 395 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccc----cCHHHHHHHHHhC-CCCCceeecCC
Confidence 557778888888888888888764 6666543 333334444443211 1245555555544 552 4466
Q ss_pred C-------CC---CCCCC----CEEEEEee-cCCHHHHHHHHHHHHHH
Q 046900 401 S-------SC---HCSEP----GWFRVCFA-NMSEQTLEVALKRIHNF 433 (442)
Q Consensus 401 ~-------~f---~~~~~----~~iRls~~-~~~~e~i~~~l~~l~~~ 433 (442)
. .| +...+ .|+-++.+ .++++|++.++++|.++
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 396 DSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 5 22 21111 24444333 34899999999999875
No 244
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.83 E-value=4.4e-18 Score=168.46 Aligned_cols=275 Identities=13% Similarity=0.106 Sum_probs=177.3
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCC---CeEEEcCCCCcChHH----hHhhhcCcEE----EEEecCCCCCCcCCHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPG---DALLVPTPYYPGFDR----DLRWRTGIKI----VPIHCDSSNNFQITPQA 186 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~g---d~Vl~~~p~y~~~~~----~~~~~~G~~v----~~v~~~~~~~~~~d~~~ 186 (442)
+++++|++|+|+++++..++.++++++ +.|++....|+.... .++ ..|+++ +.++.+. ++.+|++.
T Consensus 84 ~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~-~~g~~~~~~~~~~~~~~--~g~~~~~~ 160 (406)
T TIGR01814 84 AKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQ-LHGLTVEESMVQIEPRE--EETLRLED 160 (406)
T ss_pred CCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHH-hcCCCcccceEEeccCC--CCccCHHH
Confidence 678999999999999999999886664 368888889987333 234 368887 4555443 34578899
Q ss_pred HHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCC
Q 046900 187 LEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKD 266 (442)
Q Consensus 187 l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~ 266 (442)
+++.++.. +.++++|+++.++|.||.+++ +++|.++|+++|+++++|++++. |.....+...
T Consensus 161 l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~~~-------- 222 (406)
T TIGR01814 161 ILDTIEKN---GDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV----GNVPLDLHDW-------- 222 (406)
T ss_pred HHHHHHhc---CCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc----CCcccccccC--------
Confidence 99888632 247899999999999999998 78888899999999999999984 2212222222
Q ss_pred CCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHHcc------------------------ccCCCcHHHHHHHHHH
Q 046900 267 SERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMS------------------------SFTLISSQTQYLLASM 321 (442)
Q Consensus 267 ~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~------------------------~~~~~s~~~q~~~~~~ 321 (442)
+.-+++.|.+|.++ .|| .|..+. ++.......... ..++.+.+.-.++.+.
T Consensus 223 -gvD~~~~s~hK~l~g~pG--~~l~v~-~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~a 298 (406)
T TIGR01814 223 -GVDFACWCTYKYLNAGPG--AGAFVH-EKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGS 298 (406)
T ss_pred -CCCEEEEcCccccCCCCC--eEEEEe-hhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHH
Confidence 33478899999873 345 343333 332221100000 0122233333333333
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeeecCC----ceEEEEEecCCcccccChhhHHHHHHHHHHc
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-----GIECLKGN----AGLFCWMNLSPLLEEQTREGELALWDSMLHE 392 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 392 (442)
++-.. +.-++..+++.++..+++.+.|.+. |+++..+. .+..+.+.++. +..++.+.|.++
T Consensus 299 l~~~~--~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~--------~~~~~~~~L~~~ 368 (406)
T TIGR01814 299 LDIFD--QAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPV--------PGKAVFQALIKR 368 (406)
T ss_pred HHHHH--hcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecC--------CHHHHHHHHHHC
Confidence 33110 1124556677777777888887663 36665542 12244555551 145777888665
Q ss_pred CcEEEeCCCCCCCCCCCEEEEEe-e-cCCHHHHHHHHHHHHHHH
Q 046900 393 VKLNISPGSSCHCSEPGWFRVCF-A-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 393 ~gi~v~pg~~f~~~~~~~iRls~-~-~~~~e~i~~~l~~l~~~l 434 (442)
||.+... .++.+|+|+ . .-++++++++++.|++++
T Consensus 369 -gi~v~~~------~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 369 -GVIGDKR------EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred -CEEEecc------CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 9987531 236899998 3 338999999999998764
No 245
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.83 E-value=9.6e-18 Score=161.90 Aligned_cols=322 Identities=17% Similarity=0.199 Sum_probs=214.6
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh-HhhhcCcE
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD-LRWRTGIK 168 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~~G~~ 168 (442)
.|.....+.+|.++++++++ .+.++.|++++.|+.+++..+++|||.| +.++|...... +. ..|+.
T Consensus 66 ~yag~~s~~~lE~~va~~~G----------~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe-~~Gav 132 (450)
T TIGR02618 66 AYAGSRNFYHLERTVRELYG----------FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQE-KNGAT 132 (450)
T ss_pred hhcCCCcHHHHHHHHHHHHC----------CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHH-hCCeE
Confidence 48777788999999999986 5579999999999998887889999977 66777444443 56 48887
Q ss_pred EEEEecCC--------CCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCC-CCcCCCHHHHHHHHHHHHhcCcEEEEe
Q 046900 169 IVPIHCDS--------SNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNP-LGATIQRSVLEELLDFATRKNIHLVSD 239 (442)
Q Consensus 169 v~~v~~~~--------~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NP-tG~~~~~~~l~~l~~~~~~~~~~vi~D 239 (442)
++.++.++ ..++.+|++.|++.+++.. ..+++++.+.+++|- .|.++|.++++++.++|++||+.||+|
T Consensus 133 ~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~--~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~D 210 (450)
T TIGR02618 133 FVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVG--ADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYD 210 (450)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhcccc--CcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 77775542 2346789999999997521 124567889999885 589999999999999999999999999
Q ss_pred ccCCc-CC-C-----CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc------
Q 046900 240 EIYSG-SA-F-----SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS------ 306 (442)
Q Consensus 240 e~y~~-~~-~-----~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~------ 306 (442)
.+... .. | .+....++.++..++. .+-. .++.|..|.++.+- .|+++..++.+.+.+++...
T Consensus 211 aAR~~gNA~~I~~re~g~~~~~i~ei~~e~~--~~aD-~~~~S~~Kd~~~~~--GG~l~~~d~~l~~k~r~~~~~~eG~~ 285 (450)
T TIGR02618 211 ATRCVENAYFIKEREQGYEDKSIAEILKEMM--SYAD-GCTMSGKKDCLVNI--GGFLCMNDDEMFQSAKELVVVFEGMP 285 (450)
T ss_pred ccchhhChhhhhcccccccCCCHHHHHHHHh--ccCc-EEEEeeccCCCCCC--ceEEEeCCHHHHHHHHHHhhhcCCcc
Confidence 99764 11 1 1122345544443310 0112 36789999887661 27777678888877765422
Q ss_pred -cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCccccc--ChhhHH
Q 046900 307 -FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQ--TREGEL 383 (442)
Q Consensus 307 -~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~ 383 (442)
++.++.-...+++-.|... ....++++ -....++|.+.|.+.|+.+..|.+|.-++++....+..- ....+.
T Consensus 286 tyGgla~r~~~ala~gL~e~-~~~~y~~~----r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~ 360 (450)
T TIGR02618 286 SYGGLAGRDMEAMAIGIREA-VDYEYIEH----RVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQ 360 (450)
T ss_pred ccCchhhhhHHHHHHHHHHh-hhHHHHHH----HHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChHH
Confidence 2222322222222222221 00122222 222357888999888999988888889999876532211 112478
Q ss_pred HHHHHHHHcCcEEEe-CCCCCCCCC----------CCEEEEEee--cCCHHHHHHHHHHHHHHHHH
Q 046900 384 ALWDSMLHEVKLNIS-PGSSCHCSE----------PGWFRVCFA--NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 384 ~l~~~l~~~~gi~v~-pg~~f~~~~----------~~~iRls~~--~~~~e~i~~~l~~l~~~l~~ 436 (442)
.++.+|..+.||--. -|+...... -..+||++. .-+.+.++...++|..+.++
T Consensus 361 al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 361 SLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred HHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 889999888888643 343321111 146999986 22788899999988887665
No 246
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=4.4e-17 Score=161.14 Aligned_cols=359 Identities=12% Similarity=0.065 Sum_probs=207.0
Q ss_pred CCCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+...+.+||+..+. ..+ .++.+.+.+.+..... ..+.......+....+|+.+.+...
T Consensus 32 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l------------~~~~~~~~~~~~~~~la~~l~~~~p-- 97 (425)
T PRK07495 32 AEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRF------------THTCHQVVPYENYVRLAERLNALVP-- 97 (425)
T ss_pred cEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhc------------cCcccCccCCHHHHHHHHHHHHhCC--
Confidence 444455567788986553 223 3355555555443210 0010101123445556666665321
Q ss_pred CccC-CCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCc-------------EEEEEecCCCCC
Q 046900 116 AKFD-LNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGI-------------KIVPIHCDSSNN 179 (442)
Q Consensus 116 ~~~~-~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~-------------~v~~v~~~~~~~ 179 (442)
-. .+.++++++++++++.+++... .....|+...-+|.+.........|. .++.+|.+...
T Consensus 98 --~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (425)
T PRK07495 98 --GDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL- 174 (425)
T ss_pred --CCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-
Confidence 11 2589999999999999877542 22357888888887653221100110 22333322110
Q ss_pred CcCC----HHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 180 FQIT----PQALEAAYKEAESKDMRVRGVLITNP-SNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 180 ~~~d----~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
...+ .+.+++.+.+.. .+.++.+|++... +| +|. .+|.+.+++|.++|++||+++|+||+|..+...+..+
T Consensus 175 ~g~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~- 251 (425)
T PRK07495 175 HGVSVEQSLAALDKLFKADV-DPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF- 251 (425)
T ss_pred ccccHHHHHHHHHHHHHhcc-CCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCce-
Confidence 0122 334455554210 1235665555432 45 784 5788999999999999999999999999876555321
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhc---CchhH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLS---NKKFT 328 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~---~~~~~ 328 (442)
.. .. .+.+..+.+|||.++ +|+|+|++++ ++.+.+.+.. ....+..++++++++.+.++ +.+.
T Consensus 252 a~---~~------~gv~pDi~tlsK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l- 319 (425)
T PRK07495 252 AM---EH------HEVAADLTTMAKGLA-GGFPLAAVTG-RAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDL- 319 (425)
T ss_pred ee---cc------cCCCCCEEeehhhhc-CCccceEEEE-cHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchH-
Confidence 11 11 133445789999998 9999999999 5566655543 22335678888885555544 3332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCccc-ccChhhHHHHHHHHHHcCcEEEeCCCCCCCCC
Q 046900 329 ENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLE-EQTREGELALWDSMLHEVKLNISPGSSCHCSE 407 (442)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~ 407 (442)
.++++++.+.++++.+.+.+.+ ........-|+++|+++..... .........+...++++ |+++.+... .
T Consensus 320 ~~~~~~~g~~l~~~L~~l~~~~---~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~g~----~ 391 (425)
T PRK07495 320 CERANQLGNRLKQRLASLRETV---PEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEK-GLILLTCGV----H 391 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHhhC---CCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHC-CeEEeecCC----C
Confidence 3344444555544444433322 2111112337899999854211 01111245677777776 999876321 1
Q ss_pred CCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 408 PGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 408 ~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
.+.+|+... .++++++++++++|.+++++.+
T Consensus 392 ~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 392 GNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 367999876 5599999999999999998765
No 247
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=2.5e-17 Score=161.29 Aligned_cols=350 Identities=11% Similarity=0.095 Sum_probs=214.0
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
...|+|-..||..++.. ...+....... +.+| +.....|+......++.....+...+.++ .+.-||-.-+
T Consensus 49 ~~~l~LiasEN~~s~~v-~~a~~s~l~nk-yaeg---~pg~ryy~g~~~~d~ie~l~~~ra~~lf~----a~~anvqp~S 119 (493)
T PRK13580 49 RSSLKLIASENYSSLAV-QLAMGNLLTDK-YAEG---TPGHRFYAGCQNVDTVEWEAAEHAKELFG----AEHAYVQPHS 119 (493)
T ss_pred hcCceEecccccCCHHH-HHHhccccccc-CcCC---CCCccccCCCchHHHHHHHHHHHHHHHhC----CCcccccCCC
Confidence 34578888888776433 22222211110 0011 11223355556667777777777777766 4556777777
Q ss_pred ChHHHHHHHHHhhcCC-------------------------------CCeEEEcCCCCcChHH-----hHhhhcCcEEEE
Q 046900 128 GATAANELLTFILADP-------------------------------GDALLVPTPYYPGFDR-----DLRWRTGIKIVP 171 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~-------------------------------gd~Vl~~~p~y~~~~~-----~~~~~~G~~v~~ 171 (442)
| +.|+..++.+|++| ||+|+..++...++.. .+. ....++..
T Consensus 120 g-~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~-~~~~~~~~ 197 (493)
T PRK13580 120 G-ADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNIS-GKMFHQRS 197 (493)
T ss_pred c-HHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchh-hheeeeEe
Confidence 6 45677778888876 8999988776654422 111 12356667
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++++.+ ...+|.+++++.+++ +++.|+++..+|=++ ..+ +++|.++|+++|+++++|++|+...+++..
T Consensus 198 y~vd~~-~g~iD~d~l~~~~~~------~~plvii~g~S~~~~-~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~ 266 (493)
T PRK13580 198 YGVDPD-TGLLDYDEIAALARE------FKPLILVAGYSAYPR-RVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKV 266 (493)
T ss_pred cccCcc-cCccCHHHHHHHHhh------cCCEEEEeCccccCC-CcC---HHHHHHHHHHcCCEEEEECchhhceecccc
Confidence 777643 346999999999986 667788887766544 666 778888888999999999999976655332
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHH
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
... ...+. ...-++++|++|++ .|-+.|++++ ++.+.+.+.+..++ ++..++...+++..+. +...
T Consensus 267 ~~~--~~~~~-----~~~D~vtgT~hKaL--~GP~GG~I~~-~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~--e~~~ 334 (493)
T PRK13580 267 FTG--DEDPV-----PHADIVTTTTHKTL--RGPRGGLVLA-KKEYADAVDKGCPLVLGGPLPHVMAAKAVALA--EART 334 (493)
T ss_pred chh--hcCCC-----CCCcEEEeCChhhc--cCCCeEEEEe-cHHHHHHHhhCCCcccCCCccHHHHHHHHHHH--HHhC
Confidence 110 00000 12337789999988 3344699998 56666666544333 2222222222222222 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC-CC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSAGIECLKG-NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC-SE 407 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~-~~ 407 (442)
...+..++++.++.+.|.+.|.+.|+++... ..+-.+++.+.+.. .....+.+.+++.||.+.+-..... .+
T Consensus 335 ~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~------~~g~~a~~~L~e~GI~vn~i~~Ptvp~g 408 (493)
T PRK13580 335 PEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFG------LTGRQAESALLDAGIVTNRNSIPSDPNG 408 (493)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHH------HHHHHHHHHHHHCCeEEccccCCCCCCC
Confidence 1124567888999999999999999987531 22346777776531 1233344444556999975332221 12
Q ss_pred ---CCEEEEEeec-----CCHHHHHHHHHHHHHHHHHH
Q 046900 408 ---PGWFRVCFAN-----MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 408 ---~~~iRls~~~-----~~~e~i~~~l~~l~~~l~~~ 437 (442)
+..|||++.. +++++++++++.|.++++..
T Consensus 409 ~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 409 AWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred CCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 4569999753 35799999999999888753
No 248
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=3.3e-17 Score=153.78 Aligned_cols=345 Identities=16% Similarity=0.147 Sum_probs=219.5
Q ss_pred CCCCCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCC
Q 046900 41 YEESTNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRA 116 (442)
Q Consensus 41 ~~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 116 (442)
|.-+.+....|||..+ .|.++ ++.+.+.++++.+.... ....| +.+.+.++|+.+.+..
T Consensus 35 ~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h--------~sn~~-----~~~~~~~la~~L~~~s---- 97 (404)
T COG4992 35 YVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH--------VSNLF-----YNEPQAELAEKLVELS---- 97 (404)
T ss_pred EEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh--------ccccc-----CChHHHHHHHHHHhhC----
Confidence 3345677888998654 45553 46666666654321100 01112 2455667777776531
Q ss_pred ccCCCcEEEecChHHHHHHHHHhhcC----C-CCeEEEcCCCCcChHHhHhhhcCcEE--E--EEecCCCC---CCcCCH
Q 046900 117 KFDLNRIVVTAGATAANELLTFILAD----P-GDALLVPTPYYPGFDRDLRWRTGIKI--V--PIHCDSSN---NFQITP 184 (442)
Q Consensus 117 ~~~~~~i~~t~G~~~ai~~~~~~l~~----~-gd~Vl~~~p~y~~~~~~~~~~~G~~v--~--~v~~~~~~---~~~~d~ 184 (442)
+ ..+.|+++|+++||++.+++.-.. + ..+|+...-+|.+-....- +.+.+. . .-|+.+.- .|. |+
T Consensus 98 ~-~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~gal-S~t~~~ky~~~F~Pl~~g~~~vpfn-Di 174 (404)
T COG4992 98 P-FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGAL-SATGQPKYRKGFGPLLPGFRHVPFN-DI 174 (404)
T ss_pred c-cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceee-eccCChhhccCCCCCCCCceecCCC-CH
Confidence 1 378999999999999999876522 1 2367777666654221111 111111 0 00111100 122 78
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHH-HHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhc
Q 046900 185 QALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSV-LEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQ 263 (442)
Q Consensus 185 ~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~-l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~ 263 (442)
+++++++.+ ++.+|++..-+--.|++.+.++ ++++.++|++||+++|.||+...+..+|+- ......
T Consensus 175 ~al~~ai~~------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~----fA~e~~-- 242 (404)
T COG4992 175 EALEAAIDE------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKL----FAYEHY-- 242 (404)
T ss_pred HHHHHHhcc------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchH----HHHHHh--
Confidence 999999986 8888888766888998765555 999999999999999999999987766642 222221
Q ss_pred CCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHH--HccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q 046900 264 YKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR--RMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQK 341 (442)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~--~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 341 (442)
+..--+-++.|++| .|+.+|.+++. +.+...+. ...+.++.++++.+++.+.++-.. -+...+..++
T Consensus 243 ----gV~PDI~tlaK~Lg-GG~PigA~la~-~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~-----~e~ll~~v~~ 311 (404)
T COG4992 243 ----GVEPDILTLAKALG-GGFPIGAMLAT-EEIASAFTPGDHGSTFGGNPLACAVALAVLEVLL-----EEGLLENVRE 311 (404)
T ss_pred ----CCCCCEEEeecccc-CCccceeeEEc-hhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHc-----chhHHHHHHH
Confidence 11111346889998 99999999994 55555443 234445678888887777665321 1223344455
Q ss_pred HHHHHHHHHHhC----CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-
Q 046900 342 RYQMIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA- 416 (442)
Q Consensus 342 ~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~- 416 (442)
.-++|.+.|+++ ++-...-.-|+++-+++.... .+.++...+.++ |+++.+. ++..+|+...
T Consensus 312 ~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~------~a~~~~~~~~~~-gvL~~~a------~~~ViR~~PpL 378 (404)
T COG4992 312 KGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY------RARDIVRALREE-GVLVLPA------GPNVIRFLPPL 378 (404)
T ss_pred HHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc------cHHHHHHHHHHC-CeEEecC------CCCeEEecCCc
Confidence 556666666654 211122355788888887632 156788888777 9999873 3458999887
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhhc
Q 046900 417 NMSEQTLEVALKRIHNFMQKRERRR 441 (442)
Q Consensus 417 ~~~~e~i~~~l~~l~~~l~~~~~~~ 441 (442)
.++++++++++++|.+++.+...+.
T Consensus 379 ~i~~eei~~~~~~l~~~l~~~~~~~ 403 (404)
T COG4992 379 VITEEEIDEALDALERALAAASARV 403 (404)
T ss_pred cCCHHHHHHHHHHHHHHHHHhhhcc
Confidence 5599999999999999999876653
No 249
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=2.2e-17 Score=163.41 Aligned_cols=155 Identities=23% Similarity=0.326 Sum_probs=120.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH----hHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR----DLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~G~~v~~v 172 (442)
...|++.+|++.+ .+..++++++++++.+++.+++++||+|+++.+.|..... .+. ..|++++.+
T Consensus 65 ~~~le~~lA~l~g----------~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~-~~G~~v~~v 133 (427)
T PRK05994 65 NAVLEERVAALEG----------GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFK-SFGWQVRWA 133 (427)
T ss_pred HHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHH-hcCcEEEEE
Confidence 4677888888764 3357888889999999999999999999999999986433 345 389999888
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+.+ |++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+.... .
T Consensus 134 d~~-------d~~~l~~ai~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~----~ 193 (427)
T PRK05994 134 DAD-------DPASFERAITP------RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL----I 193 (427)
T ss_pred CCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc----C
Confidence 742 68889988864 7899999999999999998 77888899999999999999974221 1
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEee
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYS 292 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~ 292 (442)
.++ .+ +--+++.|++|.+|-+|-.+|.+++
T Consensus 194 ~pl-~~---------gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 194 RPI-EH---------GADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred Ccc-cc---------CCcEEEEcCccccCCCCCcEEEEEE
Confidence 111 12 2237889999999866756665554
No 250
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.81 E-value=7e-17 Score=160.90 Aligned_cols=357 Identities=13% Similarity=0.094 Sum_probs=202.3
Q ss_pred CCCCCceeeeecc--cccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLA--ENQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+||+..+ .+.+ .++.+.+.+.+..+..... ....| ..+....+++.+.+... -.
T Consensus 39 d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~-------~~~~~-----~~~~~~~la~~L~~~~~----~~ 102 (433)
T PRK08117 39 GVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHG-------PSGVI-----YYESILKLAEELAEITP----GG 102 (433)
T ss_pred eCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCc-------ccccc-----CCHHHHHHHHHHHHhCC----CC
Confidence 3445678898765 2333 3355555555443211000 00011 12444455555554321 12
Q ss_pred CCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcC--c-----------EEEEEecCCCC--CCc-
Q 046900 120 LNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTG--I-----------KIVPIHCDSSN--NFQ- 181 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G--~-----------~v~~v~~~~~~--~~~- 181 (442)
.+.+++++++++|+..+++... .....|+...-+|.+.........+ . .+..+|..... .+.
T Consensus 103 ~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (433)
T PRK08117 103 LDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGE 182 (433)
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccC
Confidence 3579999999999999887531 1235677777777664432210011 0 11222221100 000
Q ss_pred -------CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 182 -------ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 182 -------~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
-|++.+++.+++.. .+.++.+|++..-....|.+. +.+.+++|.++|++||+++|+||+|..+...+..+.
T Consensus 183 ~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~ 261 (433)
T PRK08117 183 DPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA 261 (433)
T ss_pred chhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh
Confidence 14556666665311 123455555544356667764 677899999999999999999999998665554221
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--cccCCCcHHHHHHHHHHhcCchhHHHH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSFTLISSQTQYLLASMLSNKKFTENY 331 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~ 331 (442)
. ..+ +...-+.+|||++| +|+++|++++ ++.+.+.+... ...+..+++++.++.+.|+... .
T Consensus 262 ~-~~~---------gv~pDi~t~sK~lg-~G~pigav~~-~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~--~-- 325 (433)
T PRK08117 262 A-QTF---------GVVPDIMTIAKGIA-SGLPLSAVVA-SKELMEQWPLGSHGTTFGGNPVACAAALATLEVIK--E-- 325 (433)
T ss_pred H-hhc---------CCCCCEeehhhhcc-CCCcceeEEE-cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH--h--
Confidence 1 111 11122469999999 9999999998 56666555321 2224567888888887776321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCC
Q 046900 332 IKTNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSE 407 (442)
Q Consensus 332 ~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~ 407 (442)
....+.+++..+++.+.|++ +++.......|+++++++..............+...++++ ||.+.+.. ..
T Consensus 326 -~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~g----~~ 399 (433)
T PRK08117 326 -EKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEK-GLLFYLCG----NA 399 (433)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHC-CCEEeecC----CC
Confidence 11223333334444444433 2332334556677788775321111112345667777666 99987632 12
Q ss_pred CCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 408 PGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 408 ~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
..++|++++ .++++++++++++|.+++++..+
T Consensus 400 ~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 400 GNVLRMIPPLTVTKEEIDEGLDILDEALTEYEA 432 (433)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHhc
Confidence 468999964 44999999999999999987643
No 251
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.9e-17 Score=152.44 Aligned_cols=330 Identities=15% Similarity=0.145 Sum_probs=201.8
Q ss_pred eeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChH
Q 046900 51 IQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGAT 130 (442)
Q Consensus 51 i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~ 130 (442)
++|.+..-.-+.+.+.+.+.+... .....|+ ..+.-+++.+++.+.++ ...++++.++|
T Consensus 2 ~~f~SDn~~g~~~~m~eam~~a~~-----------~~~~~YG----~D~~~~~~e~~~ae~~g------~~a~~Fv~sGT 60 (342)
T COG2008 2 IDFRSDNVAGPTPEMREALAAANA-----------VGDDVYG----EDPTTNALEQRIAELFG------KEAALFVPSGT 60 (342)
T ss_pred CccccCccCCCCHHHHHHHHhccc-----------cCCCCCC----CCHHHHHHHHHHHHHhC------CceEEEecCcc
Confidence 345544433445666666665531 0123454 44555666666665544 37899999999
Q ss_pred HHHHHHHHhhcCCCCeEEEcCCCCcChHHh--HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeC
Q 046900 131 AANELLTFILADPGDALLVPTPYYPGFDRD--LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITN 208 (442)
Q Consensus 131 ~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~--~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~ 208 (442)
+++.+++.+.++||+.|++..-.|-...+. .....|.. +++..+..+-.+++++++..++...-....+.++++.|
T Consensus 61 ~aN~lal~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~--~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~ 138 (342)
T COG2008 61 QANQLALAAHCQPGESVICHETAHIYTDECGAPEFFGGGQ--KLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLEN 138 (342)
T ss_pred HHHHHHHHHhcCCCCeEEEeccccceecccCcHHHHcCCc--eeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEee
Confidence 999999999999999999998887554322 22112222 33333333346899999998875211234556677777
Q ss_pred CCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc--CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 209 PSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG--SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 209 P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~--~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
++|-.|.++|.+++++|.++|+++++.+..|.+-.. .+..+ ++...+... -. .+.-++||..+.|
T Consensus 139 ~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg---~~~~~~~~~------~D-~v~~~~tK~g~~~--- 205 (342)
T COG2008 139 TATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALG---VALKTIKSY------VD-SVSFCLTKGGGAP--- 205 (342)
T ss_pred ccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC---CCHHHHHhh------CC-EEEEecccCCcce---
Confidence 777889999999999999999999999999998331 22222 344444332 22 3345789988755
Q ss_pred eEEEeecCHHHHHHHHHcccc-C---CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC
Q 046900 287 VGTIYSYNDKVVTTARRMSSF-T---LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGN 361 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~-~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 361 (442)
+|.|+..+..+.+.++..+.. + .-+.+..+....+|++.-|. ...+.-.+....|.+.|... |+++..|.
T Consensus 206 ~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~-----~~~~Han~mA~~La~~~~~~~G~~~~~~~ 280 (342)
T COG2008 206 VGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWR-----LAADHANAMAARLAEGLEAKPGVKLAFPV 280 (342)
T ss_pred eeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHH-----HHHHHHHHHHHHHHHhhhhcCCceeccCC
Confidence 488887787777665433222 1 12233334444555554331 11112222356777888854 99987754
Q ss_pred ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 362 AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 362 ~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
-.+.++++++.... +.......+.+. |+.+.+++ ..+|+.++ ..+++++++++..+++++
T Consensus 281 ~tN~vf~~l~~~~i-----~~l~~~~~~~~~-~~~~~~~~-------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 281 ETNMVFVRLPESAI-----EALRLAGALFYR-GVLIGAHG-------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred cccEEEEECChHHH-----HHHHhhchhhee-eeeccCCC-------ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 44588888886311 122222222222 55544322 35898876 338999999999988764
No 252
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.81 E-value=5.4e-17 Score=160.21 Aligned_cols=355 Identities=13% Similarity=0.076 Sum_probs=204.7
Q ss_pred CCCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+.....+||+..+. ..+ .++.+.+.+.+..... ..........+.+..+|+.+.+....+
T Consensus 27 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~------------~~~~~~~~~~~~~~~lae~l~~~~~~~ 94 (412)
T TIGR02407 27 STLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADD------------GIIHSLDMATEAKREFLETFNEIILKP 94 (412)
T ss_pred CEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhc------------cceeccccCcHHHHHHHHHHHHhccCc
Confidence 344445567788986553 223 3455555555443210 000001112355556666665431000
Q ss_pred CccCCCcEEE-ecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCCCCCC
Q 046900 116 AKFDLNRIVV-TAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDSSNNF 180 (442)
Q Consensus 116 ~~~~~~~i~~-t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~~~~~ 180 (442)
... .+.+++ +++++++++.+++.... ...+|+...-+|.+....+....|. .++.+|.......
T Consensus 95 ~~~-~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 173 (412)
T TIGR02407 95 RGL-DYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGG 173 (412)
T ss_pred cCC-CceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCcccc
Confidence 001 124655 58999999988876532 3367888888887765332211221 2233332110000
Q ss_pred -cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc-HHH
Q 046900 181 -QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS-IAE 257 (442)
Q Consensus 181 -~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s-~~~ 257 (442)
.-+++.+++.+.+......++.+|++..-.++.|. +.+.+.+++|.++|++||+++|+||++..+...|..+.. ...
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~ 253 (412)
T TIGR02407 174 DVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAG 253 (412)
T ss_pred chhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccC
Confidence 01366677777543211124566665544788898 568888999999999999999999999875444432110 011
Q ss_pred HHhhhcCCCCCcEEEEecCcccCCCC-CceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHH---HH-HhcCchhHHH
Q 046900 258 ILEARQYKDSERVHIVYSLSKDLGLP-GFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLL---AS-MLSNKKFTEN 330 (442)
Q Consensus 258 ~~~~~~~~~~~~vi~~~S~SK~~g~~-G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~---~~-~l~~~~~~~~ 330 (442)
+. ++ +.++||.+| + |+|+|++++++ .+ ..+.. ....+..++++..++ .. ++.++++ .+
T Consensus 254 v~-------PD----i~~~~K~lg-~~G~pigav~~~~-~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l-~~ 318 (412)
T TIGR02407 254 IE-------PD----IVCLSKSIS-GYGLPLALTLIKP-EL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAF-EK 318 (412)
T ss_pred CC-------CC----EEEechhcc-CCccceeEEEEch-hh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHH-HH
Confidence 11 22 336899998 7 99999999954 44 33321 122234455533332 23 3444433 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCE
Q 046900 331 YIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGW 410 (442)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~ 410 (442)
+++++.+.++++.+.+.+.+.. +.......|+++|++++... ....+...++++ ||.+.+... ....
T Consensus 319 ~~~~~g~~l~~~l~~l~~~~~~--~~~~vrg~Gl~~~l~l~~~~------~~~~~~~~~~~~-Gv~v~~~~~----~~~~ 385 (412)
T TIGR02407 319 AVQRKSEIIQERLDRIVAEYPE--LIKQVRGRGLMQGIECGDGD------LAGKIAKAAFEN-GLIIETSGP----NDEV 385 (412)
T ss_pred HHHHHHHHHHHHHHHHHhhCCC--ceEeeecceeEEEEEecChH------HHHHHHHHHHHC-CCEEeccCC----CCCE
Confidence 5666666666655555444421 23444567899999997531 256778888776 999987432 2357
Q ss_pred EEEEee-cCCHHHHHHHHHHHHHHHH
Q 046900 411 FRVCFA-NMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 411 iRls~~-~~~~e~i~~~l~~l~~~l~ 435 (442)
+|++.+ .++++++++++++|.+++.
T Consensus 386 lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 386 IKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 999886 4599999999999999875
No 253
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=6.3e-17 Score=161.92 Aligned_cols=284 Identities=13% Similarity=0.112 Sum_probs=176.2
Q ss_pred cCCCcEEEe---cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---------hcCcEEEEEecCCCCCCcCCHH
Q 046900 118 FDLNRIVVT---AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---------RTGIKIVPIHCDSSNNFQITPQ 185 (442)
Q Consensus 118 ~~~~~i~~t---~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---------~~G~~v~~v~~~~~~~~~~d~~ 185 (442)
++++++.++ +|+++++..++.+|+++||+|++....|......... ..+.++..++++.+ ..+|++
T Consensus 95 a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~--g~id~~ 172 (452)
T PTZ00094 95 LDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEK--GLIDYD 172 (452)
T ss_pred CCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCC--CCcCHH
Confidence 567777666 7889999999999999999999988777665443210 01234455556543 468999
Q ss_pred HHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc-cHHHHHhhhcC
Q 046900 186 ALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV-SIAEILEARQY 264 (442)
Q Consensus 186 ~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~-s~~~~~~~~~~ 264 (442)
+|++.+++. +++++++. ++.+|...+ +++|.++|+++|+++++|++++.......... ++
T Consensus 173 ~L~~~l~~~-----~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~--------- 233 (452)
T PTZ00094 173 KLEELAKAF-----RPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF--------- 233 (452)
T ss_pred HHHHHHHHh-----CCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC---------
Confidence 999999752 55666553 334898888 66777888899999999999985443321111 11
Q ss_pred CCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHH-Hc---ccc---CCCcHHHHHHHHHHhcCchhH-HHHHHHHH
Q 046900 265 KDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR-RM---SSF---TLISSQTQYLLASMLSNKKFT-ENYIKTNR 336 (442)
Q Consensus 265 ~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~-~~---~~~---~~~s~~~q~~~~~~l~~~~~~-~~~~~~~~ 336 (442)
.+.-+++.|.+|+++ |.+.|++++.+. +.+.+. .. ..+ ++.+.....++...++ +. ....++.+
T Consensus 234 --~~~D~l~~S~hK~l~--GP~Gg~l~~~~~-~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~---~~~~~~~~~~~ 305 (452)
T PTZ00094 234 --PYADVVTTTTHKSLR--GPRSGLIFYRKK-VKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLK---EVQSPEWKEYA 305 (452)
T ss_pred --CCCcEEEcCCccCCC--CCCceEEEEecc-cchHHHHhhccccCCCCCCCchHHHHHHHHHHHH---HHhChhHHHHH
Confidence 022377899999872 333588887443 322211 11 111 1223333333333333 22 12345667
Q ss_pred HHHHHHHHHHHHHHHhCCCeeecCCc-eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEe-CCCCCCC--CCCCEEE
Q 046900 337 ERLQKRYQMIIEGLRSAGIECLKGNA-GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNIS-PGSSCHC--SEPGWFR 412 (442)
Q Consensus 337 ~~~~~~~~~l~~~L~~~g~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~-pg~~f~~--~~~~~iR 412 (442)
+++.++++++.+.|.+.|+++..+.. .-...+.+..... +...+...| +++||.+. +|..+.. ..++++|
T Consensus 306 ~~i~~l~~~l~~~L~~~g~~v~~~~~~~~~~~v~~~~~~~-----~~~~~~~~L-~~~gI~vs~~~~p~~~~~~~~~~vR 379 (452)
T PTZ00094 306 KQVLKNAKALAAALEKRGYDLVTGGTDNHLVLVDLRPFGI-----TGSKMEKLL-DAVNISVNKNTIPGDKSALNPSGVR 379 (452)
T ss_pred HHHHHHHHHHHHHHHhCCcEEecCCCCCceEeecCCcCCC-----CHHHHHHHH-HHCCcEEecccCCCCCcCCCCCeEE
Confidence 88888999999999888888764221 2234444432111 134455554 66699994 4332221 1247899
Q ss_pred EEeecC-----CHHHHHHHHHHHHHHHHH
Q 046900 413 VCFANM-----SEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 413 ls~~~~-----~~e~i~~~l~~l~~~l~~ 436 (442)
+++... ++++++++++.|.+++..
T Consensus 380 is~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 380 LGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred ECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 998532 389999999999998875
No 254
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.80 E-value=2.3e-16 Score=152.87 Aligned_cols=321 Identities=15% Similarity=0.177 Sum_probs=212.9
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh-HhhhcCcE
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD-LRWRTGIK 168 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~~G~~ 168 (442)
.|.....+.+|.++++++++ .+.++.+++++.++.+++...+++||.| +..+|...... +. ..|+.
T Consensus 73 ~Yagd~s~~~LE~~vAe~lG----------~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~-~~Ga~ 139 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYYG----------FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQE-LNGGI 139 (460)
T ss_pred hhcCCCcHHHHHHHHHHHHC----------CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHH-hCCcE
Confidence 47777788999999999986 4568999999999998877778999965 44434333333 55 37886
Q ss_pred EEEEecC--------CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC-CcCCCHHHHHHHHHHHHhcCcEEEEe
Q 046900 169 IVPIHCD--------SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPL-GATIQRSVLEELLDFATRKNIHLVSD 239 (442)
Q Consensus 169 v~~v~~~--------~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPt-G~~~~~~~l~~l~~~~~~~~~~vi~D 239 (442)
.+.+..+ ...++.+|++.|++.|++.. ..+++++.+.+++|.. |...|.++++++.++|++||+.||+|
T Consensus 140 fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~--~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D 217 (460)
T PRK13237 140 FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD 217 (460)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhcccc--CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence 6555322 12357899999999997521 2355678888899988 79999999999999999999999999
Q ss_pred ccCCcC-CC------CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc------
Q 046900 240 EIYSGS-AF------SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS------ 306 (442)
Q Consensus 240 e~y~~~-~~------~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~------ 306 (442)
.+...- .+ .+-...++.++..++. .... ..+.|++|.++.+ . .|+++++++.+.+.++....
T Consensus 218 aAra~gna~fI~~re~~y~~~~i~ei~~e~~--s~aD-~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~~~~eG~~ 292 (460)
T PRK13237 218 ATRCVENAYFIKEREEGYQDKSIKEIVHEMF--SYAD-GCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELVVVYEGMP 292 (460)
T ss_pred CcchhcChhhhcccccccCCCcHhHHhhhcc--CcCc-EEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhccccCCCc
Confidence 997621 00 1111234444333311 1122 4466899998754 2 49999988888888776532
Q ss_pred -cCCCcHHHHHHHHHHhcC-chhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCccccc--ChhhH
Q 046900 307 -FTLISSQTQYLLASMLSN-KKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQ--TREGE 382 (442)
Q Consensus 307 -~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~--~~~~~ 382 (442)
++.++.--..+++..+.. .+ .+|+....+ .-++|.+.|.+.|+.+..|.||.-++++.......- ....+
T Consensus 293 tygg~~grd~~alAvgl~E~~~--~~y~~~ri~----~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~ 366 (460)
T PRK13237 293 SYGGMAGRDMEAMAIGIEESVQ--YEYIEHRVG----QVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPA 366 (460)
T ss_pred CCCChhhhHHHHHHhHHHhhch--HHHHHHHHH----HHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChH
Confidence 223332222333322322 11 234433333 447888999999999999999988888765432211 11247
Q ss_pred HHHHHHHHHcCcEEEe-CCCCCCCC-----C-----CCEEEEEee--cCCHHHHHHHHHHHHHHHHH
Q 046900 383 LALWDSMLHEVKLNIS-PGSSCHCS-----E-----PGWFRVCFA--NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 383 ~~l~~~l~~~~gi~v~-pg~~f~~~-----~-----~~~iRls~~--~~~~e~i~~~l~~l~~~l~~ 436 (442)
..++.+|..+.||--. -|+..... . -..+||++. .-+.+.++...++|..+.++
T Consensus 367 ~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 367 QALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred HHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 8889999888888643 23321111 0 146999986 22788899998888887665
No 255
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=3.6e-17 Score=161.55 Aligned_cols=155 Identities=19% Similarity=0.223 Sum_probs=123.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH----hhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL----RWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~~G~~v~~v 172 (442)
..+|++++|++.+ .+..++|+++++|+.+++.+++++||+|+++...|......+ . ..|++++.+
T Consensus 66 ~~~le~~lA~l~g----------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~-~~Gi~v~~v 134 (433)
T PRK08134 66 VAVLEERVAALEG----------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLR-RFGIETTFV 134 (433)
T ss_pred HHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHh-hCCeEEEEE
Confidence 5788888888865 234688999999999999999999999999999998654443 3 379999988
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+.+ |++.+++.+++ ++|+|++.+|+||+|.+.+ +++|+++|+++|+++|+|.+++.... .
T Consensus 135 d~~-------d~~~l~~~i~~------~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~----~ 194 (433)
T PRK08134 135 KPG-------DIDGWRAAIRP------NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL----L 194 (433)
T ss_pred CCC-------CHHHHHHhcCC------CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc----C
Confidence 753 68999999875 8999999999999999999 78888999999999999999874222 1
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEee
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYS 292 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~ 292 (442)
.++ .+ +-.+++.|.+|.+|-+|-.+|.++.
T Consensus 195 ~pl-~~---------GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 195 RPF-EH---------GADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred Cch-hc---------CCCEEEeccccccCCCCCceEEEEE
Confidence 122 22 2337889999999877776777654
No 256
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.80 E-value=3.1e-18 Score=156.17 Aligned_cols=288 Identities=17% Similarity=0.293 Sum_probs=176.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCC------CCeEEEcCCCCcChHHhHhhhcCcEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADP------GDALLVPTPYYPGFDRDLRWRTGIKIV 170 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~------gd~Vl~~~p~y~~~~~~~~~~~G~~v~ 170 (442)
.++|.+.|.+.... -|+ ..++.-.|++++|+++.+.+++.+|... --.|+...|.|+.|...... ..-...
T Consensus 45 s~eL~~~Ir~LH~~-VGN-Avt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~-f~s~~y 121 (363)
T PF04864_consen 45 SPELERQIRRLHRV-VGN-AVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDF-FDSRLY 121 (363)
T ss_dssp -HHHHHHHHHHHHH-H-S-B--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCC-T-BTTE
T ss_pred cHHHHHHHHHHHHH-hcc-ccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHh-ccccCc
Confidence 36777777765543 342 2244457999999999999999998543 13799999999999887653 322222
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE-EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV-LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v-~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
...-|. ..|. +-+ . ....| ++++||||.|.+ .+.+++ ..+..+|.|-+|..-.|+.
T Consensus 122 ~w~Gda-~~~~-~~~------------~-~~~~IElVTSPNNPDG~l-----r~~V~~---g~~~k~I~D~AYYWPhyTp 178 (363)
T PF04864_consen 122 KWAGDA-SNFK-NSD------------N-PSPYIELVTSPNNPDGQL-----REAVLN---GSSGKVIHDLAYYWPHYTP 178 (363)
T ss_dssp EEEEEC-CCGT-T-S--------------CCGEEEEEESS-TTT-----------SST---TTEEEEEEE-TT-STTTS-
T ss_pred cccccH-Hhhc-cCC------------C-CCCeEEEEeCCCCCcccc-----cchhcC---CCCcceeeeeeeecccccc
Confidence 222121 1221 100 0 12244 899999999987 445553 5566789999998655542
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCch-
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKK- 326 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~- 326 (442)
+..- .+.-|.+.|+||.-|-+|-|+||.+..++.+.+.+..+... .++|.=+|.-++.+|+..-
T Consensus 179 -----I~~~--------aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~ 245 (363)
T PF04864_consen 179 -----ITAP--------ADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLD 245 (363)
T ss_dssp -------S---------B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHH
T ss_pred -----cCCC--------CCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHh
Confidence 2111 12237889999999999999999999888888887665433 5678778887777776310
Q ss_pred -hH-H----HHHHHHHHHHHHHHHHHHHHHHhCC-Ceee-------------cCCceEEEEEecCCcccccChhhHHHHH
Q 046900 327 -FT-E----NYIKTNRERLQKRYQMIIEGLRSAG-IECL-------------KGNAGLFCWMNLSPLLEEQTREGELALW 386 (442)
Q Consensus 327 -~~-~----~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~-------------~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 386 (442)
+. . +...--++.+++|.+.|.+.+..-+ +... .....-|.|+++... +.+-|
T Consensus 246 ~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e--------ed~DC 317 (363)
T PF04864_consen 246 GYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE--------EDEDC 317 (363)
T ss_dssp HCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC--------GGSSH
T ss_pred cccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc--------ccccH
Confidence 00 0 2344567888899999999886632 1111 122445999999752 11236
Q ss_pred HHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 387 DSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 387 ~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
..+++++||..+.|..|+. ++.++|||.-. ++++++.++++|..+
T Consensus 318 ~~~l~~~~I~tr~G~~fga-~~ryVRlSml~-~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 318 YAVLREAKIITRSGVLFGA-DSRYVRLSMLK-RDDDFDQLLERLSKL 362 (363)
T ss_dssp HHHHHCTTEEEEEGGGGTS--TTEEEEESSS--HHHHHHHHHHHHCC
T ss_pred HHHHHhCCcccCCCCccCC-CCCeEEEeccC-CHHHHHHHHHHHHhh
Confidence 6667788999999999985 57899999987 899999999999864
No 257
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.79 E-value=3.2e-17 Score=154.71 Aligned_cols=168 Identities=21% Similarity=0.288 Sum_probs=140.7
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc-CCCC----eEEEcCCCCcChHHhHhh--hc
Q 046900 93 DYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA-DPGD----ALLVPTPYYPGFDRDLRW--RT 165 (442)
Q Consensus 93 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd----~Vl~~~p~y~~~~~~~~~--~~ 165 (442)
.-.+.++.|+.||++++ .++.+|++|+|+|++++++++.+. ..+| +|++..-.|+.....++. ..
T Consensus 83 ~~~~~E~aR~~VAklIn--------Ad~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~ 154 (428)
T KOG1549|consen 83 AEDAVEAAREQVAKLIN--------ADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEE 154 (428)
T ss_pred hhHHHHHHHHHHHHHhC--------CCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhc
Confidence 33467899999999987 688889999999999999998873 3566 899999889887665542 27
Q ss_pred CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 166 GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 166 G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
|+++..+|.+. ....|.+.+++.|+. +|+++.+..-+|.+|+++| +++|+++|+++++.+++|.+++-
T Consensus 155 g~~Vt~lpv~~--~~~~d~~~~~~~i~~------~T~lv~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav- 222 (428)
T KOG1549|consen 155 GLEVTYLPVED--SGLVDISKLREAIRS------KTRLVSIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV- 222 (428)
T ss_pred CeEEEEeccCc--cccccHHHHHHhcCC------CceEEEEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc-
Confidence 89999999984 345789999999986 9999999999999999999 88889999999999999999983
Q ss_pred CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecC
Q 046900 246 AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYN 294 (442)
Q Consensus 246 ~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~ 294 (442)
|.....+.++..+ ++..|.+|.||.+| +|++++.+
T Consensus 223 ---G~i~vDV~eln~D---------~~s~s~HK~ygp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 223 ---GKIPVDVQELNAD---------FLSISAHKIYGPPG--IGALYVRR 257 (428)
T ss_pred ---CCccccHHHcCch---------heeeecccccCCCc--ceEEEEcc
Confidence 5556677777554 56789999999999 89999853
No 258
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.79 E-value=9.9e-18 Score=151.32 Aligned_cols=347 Identities=18% Similarity=0.282 Sum_probs=237.4
Q ss_pred CCCCCCCceeeeecccc------cccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 42 EESTNPSGVIQMGLAEN------QVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 42 ~~~~~~~~~i~l~~~~n------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
..+.+|.. |||+++.. ++-++.++++-++.... .....|.+..|++++.+..+++.-....
T Consensus 47 k~D~n~~K-iNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~----------~ldKEYlpI~Gl~eF~k~sakLa~G~~s-- 113 (427)
T KOG1411|consen 47 KKDPNPKK-INLGVGAYRDDNGKPYVLPSVRKAEQQLASL----------SLDKEYLPITGLAEFNKLSAKLALGDNS-- 113 (427)
T ss_pred hcCCCcce-eeecccceecCCCCeeeeHHHHHHHHHHhhh----------cccchhccccchHHHHHHHHHHhhcCCc--
Confidence 34555544 59998752 34456676654443321 1234799999999999999998643211
Q ss_pred CccCCCcEEEec--ChHHHHHHHHHhh--cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHH
Q 046900 116 AKFDLNRIVVTA--GATAANELLTFIL--ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAY 191 (442)
Q Consensus 116 ~~~~~~~i~~t~--G~~~ai~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l 191 (442)
..+....|+.+. ++|.++......| .-++..|.+|+|+|......+.. .|+.+..+.......-++|.+.+.+.+
T Consensus 114 ~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~-ag~~~~~yrYyd~~t~gld~~g~ledl 192 (427)
T KOG1411|consen 114 PVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKD-AGLPVKFYRYYDPKTRGLDFKGMLEDL 192 (427)
T ss_pred hhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccc-cCcceeeeeeccccccccchHHHHHHH
Confidence 113334555544 4777887765554 34788999999999999999885 899886665443334568888877777
Q ss_pred HHHHhcCCceeEEEEe--CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC--CcccHHHHHhhhcCCCC
Q 046900 192 KEAESKDMRVRGVLIT--NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS--EFVSIAEILEARQYKDS 267 (442)
Q Consensus 192 ~~~~~~~~~~~~v~l~--~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~--~~~s~~~~~~~~~~~~~ 267 (442)
.+... ..+++. ..|||||+--+.+++++|.++.++.+.+-+.|-+|..|.-+.. ...++.-+..+ .
T Consensus 193 ~~~p~-----gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~-----g 262 (427)
T KOG1411|consen 193 GEAPE-----GSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVED-----G 262 (427)
T ss_pred hcCCC-----CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHc-----C
Confidence 65321 223444 3489999999999999999999999999999999998764321 12233334443 4
Q ss_pred CcEEEEecCcccCCCCCceeEEE--eecCHHHHHHHH----Hcc-ccC-CCcHHHHHHHHHHhcCchhHHHHHH---HHH
Q 046900 268 ERVHIVYSLSKDLGLPGFRVGTI--YSYNDKVVTTAR----RMS-SFT-LISSQTQYLLASMLSNKKFTENYIK---TNR 336 (442)
Q Consensus 268 ~~vi~~~S~SK~~g~~G~RiG~i--~~~~~~~~~~~~----~~~-~~~-~~s~~~q~~~~~~l~~~~~~~~~~~---~~~ 336 (442)
.++++..|+.|.+|+.|-|+|.+ +|.++.....++ ... ..+ ..+.....++..+|++.+...+|+. -+.
T Consensus 263 ~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~Ma 342 (427)
T KOG1411|consen 263 HEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMA 342 (427)
T ss_pred CceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHH
Confidence 67888999999999999999985 565555444432 222 222 2233466677888998876666654 467
Q ss_pred HHHHHHHHHHHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEE
Q 046900 337 ERLQKRYQMIIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFR 412 (442)
Q Consensus 337 ~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iR 412 (442)
+++...|+.|.+.|+..| |..+..+-|||++-.+.. +..+.|.+++.|.+.- +| |
T Consensus 343 dRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~p-----------eQv~~l~ke~~iYmT~--------dG--R 401 (427)
T KOG1411|consen 343 DRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNP-----------EQVDWLTKEYHIYLTK--------DG--R 401 (427)
T ss_pred HhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCH-----------HHHHHHHhhheeeecc--------Cc--e
Confidence 888899999999998764 444667889999765543 4467777887887652 33 8
Q ss_pred EEeecCCHHHHHHHHHHHHHH
Q 046900 413 VCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 413 ls~~~~~~e~i~~~l~~l~~~ 433 (442)
||.+.++...+..+.++|.++
T Consensus 402 iS~aG~ss~nV~yLa~aih~v 422 (427)
T KOG1411|consen 402 ISMAGLSSSNVPYLADAIHAV 422 (427)
T ss_pred EeeccccccCCcccchhhHhH
Confidence 999876666666666666554
No 259
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=6.7e-16 Score=146.43 Aligned_cols=303 Identities=17% Similarity=0.237 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHHHhCCCCccCC-CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEEEec
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDL-NRIVVTAGATAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~-~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~v~~ 174 (442)
..+-+.+.+.+...++ .+. +-++++.+++.+++.++..+++|||+||+...+..+ +.+.++ ++|++++.+..
T Consensus 37 ~~~~~~~~~~L~~v~~----t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~-~~g~~v~~~~~ 111 (383)
T COG0075 37 VGIMKEVLEKLRKVFG----TENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAE-RYGAEVVVLEV 111 (383)
T ss_pred HHHHHHHHHHHHHHhc----CCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHH-HhCCceEEEeC
Confidence 4555555555555544 333 446666779999999999999999999998877654 456677 59999999887
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s 254 (442)
.+ +-.+|+++++++|++ +++.++|.+++.-.+||...+ +++|+++|++|+.++|+|.+-+ +++.++ .
T Consensus 112 ~w--g~~v~p~~v~~~L~~----~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g~l~iVDaVsS---~Gg~~~-~ 178 (383)
T COG0075 112 EW--GEAVDPEEVEEALDK----DPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHGALLIVDAVSS---LGGEPL-K 178 (383)
T ss_pred CC--CCCCCHHHHHHHHhc----CCCccEEEEEeccCcccccCc---HHHHHHHHHHcCCEEEEEeccc---CCCccc-c
Confidence 65 346899999999984 347788999888889999987 8889999999999999999987 455432 3
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHH-------------------ccccCCCcHHH
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARR-------------------MSSFTLISSQT 314 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~-------------------~~~~~~~s~~~ 314 (442)
+.++ +.-+++.+--|.++ .|| +|++..+++.+.....+ ...+++.+...
T Consensus 179 vd~w---------giDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~ 247 (383)
T COG0075 179 VDEW---------GIDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNL 247 (383)
T ss_pred hhhc---------CccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHH
Confidence 3333 44477888899986 444 68888754333322111 11123334445
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC---ceEEEEEecCCcccccChhhHHHHHHHHHH
Q 046900 315 QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN---AGLFCWMNLSPLLEEQTREGELALWDSMLH 391 (442)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 391 (442)
..++...|+.. .++-++...++.++..+.+.+.++.+|++....+ ......+.+|...+ ..++...+++
T Consensus 248 i~aL~~al~~i--~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~------~~~~~~~~~~ 319 (383)
T COG0075 248 IYALREALDLI--LEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVD------DKKVRRALLK 319 (383)
T ss_pred HHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCC------cHHHHHHHHH
Confidence 55555555532 2445677888899999999999999999877622 33344556676543 2334447888
Q ss_pred cCcEEEeCCCCCCCCCCCEEEEEe-ecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 392 EVKLNISPGSSCHCSEPGWFRVCF-ANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 392 ~~gi~v~pg~~f~~~~~~~iRls~-~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
++|+.+.+|.. ......+||+. +..+.+++..++.+|..++.++..
T Consensus 320 ~~g~~i~gg~~--~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 320 EYGVEIAGGQG--PLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred hCCEEeccccc--ccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 88999988743 33456899986 455889999999999999988654
No 260
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.79 E-value=1.5e-16 Score=154.01 Aligned_cols=277 Identities=20% Similarity=0.240 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hcCcEEEEEec
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RTGIKIVPIHC 174 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~~v~~ 174 (442)
..|.+++|+..+ .+.+++++++..|+..++.+++++||+|+++...|.+....+.. ..|+++..++.
T Consensus 58 ~~le~~la~Le~----------g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~ 127 (386)
T PF01053_consen 58 RALEQRLAALEG----------GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP 127 (386)
T ss_dssp HHHHHHHHHHHT-----------SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST
T ss_pred HHHHHHHHHhhc----------ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc
Confidence 455566655543 47799999999999999999999999999999999886655432 37999888753
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcC-cEEEEeccCCcCCCCCCCcc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN-IHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~-~~vi~De~y~~~~~~~~~~~ 253 (442)
-|++++++++++ ++++|++.+|+||+..+.+ +++|+++|+++| +++|+|..++...+ .
T Consensus 128 -------~d~~~l~~~l~~------~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~----~- 186 (386)
T PF01053_consen 128 -------TDLEALEAALRP------NTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYN----Q- 186 (386)
T ss_dssp -------TSHHHHHHHHCT------TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTT----C-
T ss_pred -------hhHHHHHhhccc------cceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceee----e-
Confidence 378999999976 8999999999999988877 888899999998 99999999985321 1
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecC-HHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYN-DKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~-~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
....+ +-.+++.|.+|.++ ....=.|.+++.+ +.+.+.++..... ..+++...+.+..-+++.
T Consensus 187 ~pL~~---------GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~Tl---- 253 (386)
T PF01053_consen 187 NPLEL---------GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRTL---- 253 (386)
T ss_dssp -GGGG---------T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTTH----
T ss_pred ccCcC---------CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCcH----
Confidence 11222 23388999999885 2323367888755 4566555443322 234555555555555542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCe-eec-----------------CCceEEEEEecCCcccccChhhHHHHHHHHH
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSA-GIE-CLK-----------------GNAGLFCWMNLSPLLEEQTREGELALWDSML 390 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~-----------------~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~ 390 (442)
..+.++..++...+.+.|+++ .++ +.- ..+| .+.+++.... +....+++.|
T Consensus 254 ---~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg-l~sf~l~~~~-----~~~~~f~~~l- 323 (386)
T PF01053_consen 254 ---PLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGG-LLSFELKGGE-----EAARRFLDAL- 323 (386)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTS-EEEEEESSHH-----HHHHHHHHH--
T ss_pred ---HHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCc-eeEEEeccch-----hhhHhHHhhh-
Confidence 334455566777888999886 232 221 1244 6667776632 1244555544
Q ss_pred HcCcEEEeCCCCCCC-------------------------CCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 391 HEVKLNISPGSSCHC-------------------------SEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 391 ~~~gi~v~pg~~f~~-------------------------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
.+. ..|..+|. -.++.||||++- |+.+.+++.|.++++
T Consensus 324 ---~l~-~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl---Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 324 ---KLF-SIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL---EDPDDLIADLEQALE 386 (386)
T ss_dssp ---SSS-EESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S---S-HHHHHHHHHHHHH
T ss_pred ---hhH-hhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc---CCHHHHHHHHHHhcC
Confidence 322 11111221 124689999996 557777888887764
No 261
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.79 E-value=6.1e-17 Score=141.68 Aligned_cols=304 Identities=16% Similarity=0.238 Sum_probs=210.7
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD 175 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~ 175 (442)
.+..+.+.+++|++ -|.+-+|+|+.++-+.++.+|+++||.|+++..+|....-++. +.|+++..||-.
T Consensus 62 pI~~F~~dlaeFlg----------~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAE-ragl~v~eVp~t 130 (382)
T COG1103 62 PIKDFLEDLAEFLG----------MDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAE-RAGLNVAEVPNT 130 (382)
T ss_pred cHHHHHHHHHHHhC----------CceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHH-hcCCeEEecCCC
Confidence 35677888999986 6789999999999999999999999999999988766555666 499999999976
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcC-CceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc
Q 046900 176 SSNNFQITPQALEAAYKEAESKD-MRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~-~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s 254 (442)
....|.++++...+.|.+..+++ ..+.+.+++.|...-|.+.+ -++++++|++++++++...+|.- |..+.|
T Consensus 131 g~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~gvPlllN~AYt~----Grmpvs 203 (382)
T COG1103 131 GYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREYGVPLLLNCAYTV----GRMPVS 203 (382)
T ss_pred CCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHcCCceEeecceee----cccccc
Confidence 66679999999999999887765 44677788888776777644 78999999999999999999984 445566
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHH-HHHccc--------cCCCcHHHHHHHHHHhcCc
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTT-ARRMSS--------FTLISSQTQYLLASMLSNK 325 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~-~~~~~~--------~~~~s~~~q~~~~~~l~~~ 325 (442)
..++..+ ++++|-+|.|+ +.-.+|.+... +++.+. +++... ..+++.-... +..++.+-
T Consensus 204 ~ke~g~D---------FiVgSGHKsmA-As~PiGvl~~~-eE~ae~V~r~Sg~~~~~KEvellGCT~rGap-ivTlmASf 271 (382)
T COG1103 204 GKEIGAD---------FIVGSGHKSMA-ASAPIGVLAMS-EEWAEIVLRRSGRAFPKKEVELLGCTVRGAP-IVTLMASF 271 (382)
T ss_pred ccccCCC---------EEEecCccchh-ccCCeeEEeeh-hHHHHHHHhhcccccccceeeeecccccCch-HHHHHhcC
Confidence 6666544 78899999997 55689999884 444443 443312 1223321112 22333332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCC-Ceee--cCCceEEEEEecCCccc--ccChhhHHHHHHHHHHcCcEE-EeC
Q 046900 326 KFTENYIKTNRERLQKRYQMIIEGLRSAG-IECL--KGNAGLFCWMNLSPLLE--EQTREGELALWDSMLHEVKLN-ISP 399 (442)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~--~~~~g~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~gi~-v~p 399 (442)
-+..+.+++.-+. -++.+++.+.|+++| +... .|..--.+.++.|..-. .+......-++++|.++ ||. +.|
T Consensus 272 P~V~eRVkrWdeE-v~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~R-gI~GI~~ 349 (382)
T COG1103 272 PHVVERVKRWDEE-VEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKR-GIHGIQP 349 (382)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhc-Ccccccc
Confidence 3333333333333 345568888888874 5433 23333344455554210 00000123456777555 765 444
Q ss_pred CCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 400 GSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 400 g~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
| ...+|.+|+-.++.|+++..+++++++++++
T Consensus 350 G------~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 350 G------QTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred C------ceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 3 2468999998789999999999999998875
No 262
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=9.9e-17 Score=158.25 Aligned_cols=156 Identities=20% Similarity=0.236 Sum_probs=118.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----HhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~~G~~v~~v 172 (442)
...|++.+|++.+ .+..+++++++.|+..++.+++++||+|+++...|...... +. ..|++++.+
T Consensus 71 ~~~Le~~lA~l~g----------~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~-~~Gi~v~~v 139 (436)
T PRK07812 71 QDVVEQRIAALEG----------GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLP-KLGIEVSFV 139 (436)
T ss_pred HHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhh-cCeEEEEEE
Confidence 4677777777764 34567888888999999999999999999999888775433 33 378888777
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+ +. .|++.+++++++ ++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|++++.... .
T Consensus 140 d-d~-----~d~e~l~~ai~~------~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~----~ 200 (436)
T PRK07812 140 E-DP-----DDLDAWRAAVRP------NTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL----I 200 (436)
T ss_pred C-CC-----CCHHHHHHhCCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----C
Confidence 5 22 278889888764 7899999999999999999 77888888899999999999874221 1
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEee
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYS 292 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~ 292 (442)
.++ .+ +--+++.|++|.+|..|--+|.+++
T Consensus 201 ~pl-~~---------GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 201 RPL-EH---------GADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred Cch-hc---------CCCEEEEecccccCCCCCeEEEEEE
Confidence 121 22 2236789999999877766777766
No 263
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.78 E-value=2.9e-16 Score=166.17 Aligned_cols=318 Identities=13% Similarity=0.104 Sum_probs=213.8
Q ss_pred cccccCCC---cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChH----HHHHHHHHhhcCC-CC----eEEEcCCCC
Q 046900 87 ENALFQDY---HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGAT----AANELLTFILADP-GD----ALLVPTPYY 154 (442)
Q Consensus 87 ~~~~Y~~~---~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~----~ai~~~~~~l~~~-gd----~Vl~~~p~y 154 (442)
.++-|.|. +|+.++.+.+.+++.+..| .+.|.++.+++ +++.++++++.++ || .|+++...|
T Consensus 553 ~~hp~~p~~~~~g~~~~~~~~r~~la~i~g------~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH 626 (993)
T PLN02414 553 NIHPFAPVDQAQGYQEMFEDLGDLLCEITG------FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAH 626 (993)
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHHhC------CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcC
Confidence 34445443 5777777777777776655 38999999998 8999999999866 88 899999999
Q ss_pred cChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCc
Q 046900 155 PGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNI 234 (442)
Q Consensus 155 ~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~ 234 (442)
......+.. .|++++.+|+++++ .+|+++|++.++++ ..++++|++++|+|-+|...+ +++|+++|+++|+
T Consensus 627 ~sn~a~a~~-~G~~vv~v~~d~~G--~vDle~L~~~i~~~---~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Ga 697 (993)
T PLN02414 627 GTNPASAAM-CGMKIVVVGTDAKG--NINIEELRKAAEAH---KDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGG 697 (993)
T ss_pred ccCHHHHHH-CCCEEEEeccCCCC--CcCHHHHHHHHhcc---CCCeEEEEEECCCccccccch---HHHHHHHHHHcCC
Confidence 998888885 89999999997654 68999999999742 126889999999999999866 8888999999999
Q ss_pred EEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC----CCCceeEEEeecCHHHHHHHHH-------
Q 046900 235 HLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG----LPGFRVGTIYSYNDKVVTTARR------- 303 (442)
Q Consensus 235 ~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g----~~G~RiG~i~~~~~~~~~~~~~------- 303 (442)
++++|.++..... ......++ +--+++.|.+|+|+ ..|-.+|++.+. +.+...+-.
T Consensus 698 lv~vDgAq~~a~~---~l~~p~~~---------GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~-~~L~p~lPg~~v~~~~ 764 (993)
T PLN02414 698 QVYMDGANMNAQV---GLTSPGFI---------GADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVPTG 764 (993)
T ss_pred EEEEEecCHHhcc---CcCCcccc---------CCCEEEecCCccCCcCcccCCCCeeeEEEc-hhhcccCCCCccccCC
Confidence 9999999853211 11222222 33377889999765 234458998873 444333210
Q ss_pred -----ccc--cCCCc--H----HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEE--EE
Q 046900 304 -----MSS--FTLIS--S----QTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLF--CW 367 (442)
Q Consensus 304 -----~~~--~~~~s--~----~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~--~~ 367 (442)
... .+.++ + ....++..++...+ .+.+++..+....+..++.+.|.+. ++.+..+.+.++ +.
T Consensus 765 ~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG--~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv 842 (993)
T PLN02414 765 GIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMG--SEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFI 842 (993)
T ss_pred CcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHC--HhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEE
Confidence 011 12211 1 22222333333322 3456777777888889999999763 454444444322 22
Q ss_pred EecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 368 MNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 368 ~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
++++...+..+ .++.++.++|++ +||...- ..|. ..+++||+.. .-+++++++++++|.++..+...
T Consensus 843 ~~~~~l~~~~g-~~~~di~krL~d-~Gihapt-~~~p--v~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 843 IDLRPFKNTAG-IEPEDVAKRLMD-YGFHAPT-MSWP--VPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred EeccccccccC-CCHHHHHHHHHH-cCcEEee-eccc--cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 34443221111 135789999985 5998544 3342 3678999986 22899999999999988877553
No 264
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.78 E-value=4.8e-16 Score=154.96 Aligned_cols=354 Identities=14% Similarity=0.084 Sum_probs=200.9
Q ss_pred CCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+...+.+||+..+. +.+ ..+.+.+.+.++... ...+.......+.+..+|+.+.+.... ..
T Consensus 52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~------------~~~~~~~~~~~~~~~~la~~l~~~~p~---~~ 116 (443)
T PRK06058 52 DVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVAR------------FTHTCFMVTPYEGYVAVAEQLNRLTPG---DH 116 (443)
T ss_pred eCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHh------------ccCccccccCCHHHHHHHHHHHHhCCC---CC
Confidence 34456788886543 333 335555555544321 111111122346666777777654320 11
Q ss_pred CCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCc-------------EEEEEecCCC--C--CC
Q 046900 120 LNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGI-------------KIVPIHCDSS--N--NF 180 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~-------------~v~~v~~~~~--~--~~ 180 (442)
.+.+++++++++|++.+++... ...+.|+....+|.+....+....+. .+..+|.... . .+
T Consensus 117 ~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (443)
T PRK06058 117 EKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGL 196 (443)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCccccccccc
Confidence 2478999999999999887431 23478999999998876443211111 1122221100 0 00
Q ss_pred cCCH-HHHHHHHHHHHh--cCCceeEEEEeCCCCCC-CcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccH
Q 046900 181 QITP-QALEAAYKEAES--KDMRVRGVLITNPSNPL-GAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSI 255 (442)
Q Consensus 181 ~~d~-~~l~~~l~~~~~--~~~~~~~v~l~~P~NPt-G~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~ 255 (442)
..+. +.+++.+....+ ...++.+ ++..|-+.. |.+ .+.+-+++|.++|++||+++|.||++..+...+..+. .
T Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~~iAa-vi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa-~ 274 (443)
T PRK06058 197 ATDGEEAAARAITVIEKQVGADNLAA-VIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFA-C 274 (443)
T ss_pred ccchHHHHHHHHHHHHHhhCCCceEE-EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhH-H
Confidence 0111 222222221111 1235555 456676555 444 3577799999999999999999999998755553221 1
Q ss_pred HHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--cccCCCcHHHHHHHHHHhcCchhHHHHHH
Q 046900 256 AEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSFTLISSQTQYLLASMLSNKKFTENYIK 333 (442)
Q Consensus 256 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 333 (442)
+.. . ....+ -+++|.+| .|+++|++++ ++.+.+.+... ...+..+++++.++.+.|+... + .
T Consensus 275 -~~~-g----v~PDi---v~~gK~l~-~G~Pi~av~~-~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~--~---~ 338 (443)
T PRK06058 275 -EHE-G----IVPDL---ITTAKGIA-GGLPLSAVTG-RAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIE--E---D 338 (443)
T ss_pred -Hhc-C----CCCCE---EEEccccc-CCCccEEEEE-cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH--H---c
Confidence 111 0 11222 35689998 8999999999 56666665432 2335678888888888876321 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHhC----CCee-ecCCceEEEEEecCCcc-cccChhhHHHHHHHHHHcCcEEEeCCCCCCCCC
Q 046900 334 TNRERLQKRYQMIIEGLRSA----GIEC-LKGNAGLFCWMNLSPLL-EEQTREGELALWDSMLHEVKLNISPGSSCHCSE 407 (442)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~~----g~~~-~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~ 407 (442)
...+..+++.+++.+.|+++ ++.. ....|. ++.+.+.... .....+....+...++++ ||.+.|+..|+
T Consensus 339 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~-~~~i~~~~~~~~~~~~~~~~~l~~~~~~~-Gv~~~~~~~~~--- 413 (443)
T PRK06058 339 DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGA-MIAIELVKPGTTEPDAELTKALAAAAHAA-GVIVLTCGTYG--- 413 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccce-EEEEEEecCCCCCCcHHHHHHHHHHHHHC-CeEEeccCCCC---
Confidence 23344445555666666542 3211 334554 5455553210 111112245677777676 99999875543
Q ss_pred CCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 408 PGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 408 ~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
.++|+..+ .++++++++++++|.+++++
T Consensus 414 -~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 414 -NVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred -CEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 58999755 34999999999999999865
No 265
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.77 E-value=6.6e-16 Score=153.22 Aligned_cols=360 Identities=13% Similarity=0.070 Sum_probs=197.7
Q ss_pred CCCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+.....+||+..+- ..+ .++.+.+.+.++..... . .+ ......+.+..+|+.+.+....+
T Consensus 31 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~----------~-~~-~~~~~~~~~~~lae~l~~~~~~~ 98 (425)
T PRK09264 31 SWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDG----------I-TH-GLDMHTTAKREFLETFEETILKP 98 (425)
T ss_pred CEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcc----------c-cc-ccccCcHHHHHHHHHHHHhhcCC
Confidence 333445566788886553 223 33555555554332100 0 00 00111345555666655431100
Q ss_pred CccCCCcEEE-ecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcC------------cEEEEEecCCCCCC
Q 046900 116 AKFDLNRIVV-TAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTG------------IKIVPIHCDSSNNF 180 (442)
Q Consensus 116 ~~~~~~~i~~-t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G------------~~v~~v~~~~~~~~ 180 (442)
.+. .+.+++ ++++++|++.+++... ....+|+...-+|.+....+....| ..+..+|.......
T Consensus 99 ~~~-~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 177 (425)
T PRK09264 99 RGL-DYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGG 177 (425)
T ss_pred cCC-CceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCcccc
Confidence 001 125656 5899999998877652 2235788888888775432211111 02333333210000
Q ss_pred c-CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHH
Q 046900 181 Q-ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEI 258 (442)
Q Consensus 181 ~-~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~ 258 (442)
. -|++.+++.+.+......++.+|++..-....|. +.+.+.+++|.++|++||+++|+||++..+...|..+ .....
T Consensus 178 ~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~ 256 (425)
T PRK09264 178 DVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERA 256 (425)
T ss_pred chhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhc
Confidence 0 2567888888653211124555555544556776 5678889999999999999999999998765444211 11111
Q ss_pred HhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhc----CchhHHHHH
Q 046900 259 LEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLS----NKKFTENYI 332 (442)
Q Consensus 259 ~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~----~~~~~~~~~ 332 (442)
.- .++ +.++||.+|..|+++|+++++ +.+. .+.. ....+..++++..++.+.+. +.+. .+++
T Consensus 257 ~v-----~PD----i~t~~K~l~~~G~pigav~~~-~~i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l-~~~~ 324 (425)
T PRK09264 257 GI-----TPD----IVTLSKSISGYGLPMALVLIK-PELD-VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAF-EKEV 324 (425)
T ss_pred CC-----CCC----EEEeccccCCCccceEEEEEc-hhhh-ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHH-HHHH
Confidence 10 122 347799998449999999995 4443 3221 12223445555555444442 2221 2333
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC-CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEE
Q 046900 333 KTNRERLQKRYQMIIEGLRSAG-IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWF 411 (442)
Q Consensus 333 ~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~i 411 (442)
+++.+.++++.+.+.+ +.+ +.......|+++|+.++... ....++..++++ ||.+.++..+ ...+
T Consensus 325 ~~~g~~l~~~l~~l~~---~~~~~~~~vrg~Gl~~~i~l~~~~------~~~~l~~~~~~~-Gv~~~~~~~~----~~~l 390 (425)
T PRK09264 325 KAKGELVRERLEEIAA---KYPGLGAEVRGRGMMQGIDFGDGE------LAGKIAAEAFEN-GLIIETSGPE----DEVV 390 (425)
T ss_pred HHHHHHHHHHHHHHHH---hCCCceecceecccEEEEEecChH------HHHHHHHHHHHC-CCEEeccCCC----CCEE
Confidence 3333333333322222 222 21223456788899986521 256778888776 9999875432 3568
Q ss_pred EEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 412 RVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 412 Rls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
|++.. .++++++++++++|.+++++..+
T Consensus 391 r~~p~l~~t~~ei~~~~~~l~~~l~~~~~ 419 (425)
T PRK09264 391 KLLPPLTIDEEELEEGLDILEEAVAEVLA 419 (425)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 88865 34899999999999999887543
No 266
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.77 E-value=1.2e-17 Score=144.50 Aligned_cols=166 Identities=22% Similarity=0.244 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH-HhHhhhcCcEEEEEecCC
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD-RDLRWRTGIKIVPIHCDS 176 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~~G~~v~~v~~~~ 176 (442)
.++++.++++++ .+.+++++++|+++++.+++.++.+++++|+++.++|++.. ..+. ..|+++..++.+.
T Consensus 3 ~~~~~~l~~~~~--------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~ 73 (170)
T cd01494 3 EELEEKLARLLQ--------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAE-LAGAKPVPVPVDD 73 (170)
T ss_pred HHHHHHHHHHcC--------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHH-hcCCEEEEeccCC
Confidence 578888888874 35788999999999999999999888999999999999888 6666 4899999999876
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 177 SNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 177 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
.+....+.+.+++... +.+++++++++|+||+|..++. ++|.++|+++++++|+|++|..+...... .
T Consensus 74 ~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~----~ 141 (170)
T cd01494 74 AGYGGLDVAILEELKA-----KPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG----V 141 (170)
T ss_pred CCccchhhhhhhhccc-----cCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc----c
Confidence 5433333334443322 3478899999999999999884 77788888999999999999976654321 0
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEee
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYS 292 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~ 292 (442)
.... .+..+++.|++|.||. .++|++++
T Consensus 142 ~~~~------~~~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 142 LIPE------GGADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred cccc------ccCCEEEEEcccccCC--CceEEEEe
Confidence 1111 2445778999999974 67999986
No 267
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.76 E-value=3.3e-16 Score=155.24 Aligned_cols=169 Identities=17% Similarity=0.307 Sum_probs=128.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh---------cCCCCeEEEcCCCCcChHHhHhhhcCc
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL---------ADPGDALLVPTPYYPGFDRDLRWRTGI 167 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l---------~~~gd~Vl~~~p~y~~~~~~~~~~~G~ 167 (442)
..+|++++|+|++ .+++++++|+++++.+++.++ +++||.|+++.|+|+.+...+.. .|+
T Consensus 65 ~~~fe~~lA~~~g----------~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~-~G~ 133 (438)
T PRK15407 65 NDAFEKKLAEFLG----------VRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQ-NGL 133 (438)
T ss_pred HHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHH-cCC
Confidence 4789999999975 346999999999999988775 47899999999999999988885 899
Q ss_pred EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC-
Q 046900 168 KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA- 246 (442)
Q Consensus 168 ~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~- 246 (442)
+++.++++. ..|.+|++.+++.+.+ ++++|+++++ +|... ++++|.++|++++++||+|++++...
T Consensus 134 ~pv~vdvd~-~~~~id~~~le~~i~~------~tkaVi~~~~---~G~p~---dl~~I~~la~~~gi~vIeDaa~a~G~~ 200 (438)
T PRK15407 134 VPVFVDVEL-PTYNIDASLLEAAVSP------KTKAIMIAHT---LGNPF---DLAAVKAFCDKHNLWLIEDNCDALGST 200 (438)
T ss_pred EEEEEecCC-CcCCcCHHHHHHHcCc------CCeEEEEeCC---CCChh---hHHHHHHHHHHCCCEEEEECccchhhh
Confidence 999999874 3678999999998864 7899998864 44433 47889999999999999999998432
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecC--cccCCCCCceeEEEeecCHHHHHHHHHc
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSL--SKDLGLPGFRVGTIYSYNDKVVTTARRM 304 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~--SK~~g~~G~RiG~i~~~~~~~~~~~~~~ 304 (442)
+.+....+ + + .+.+.|| +|.+. .| ..|+++++++.+.+.++.+
T Consensus 201 ~~g~~~G~---~---------g-d~~~fSf~~~k~~~-~g-eGG~l~t~d~~l~~~~~~~ 245 (438)
T PRK15407 201 YDGRMTGT---F---------G-DIATLSFYPAHHIT-MG-EGGAVFTNDPLLKKIIESF 245 (438)
T ss_pred cCCeeeec---c---------C-ceEEEeCCCCCCcc-cc-CceEEEECCHHHHHHHHHH
Confidence 22211111 1 1 1345566 46664 34 3599999888887766543
No 268
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.75 E-value=1.1e-15 Score=151.99 Aligned_cols=350 Identities=15% Similarity=0.090 Sum_probs=198.8
Q ss_pred CCCCCCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+...+.+||+..+ .+.++ ++.+.+.+.+....... .....| ..+.+..+|+.+.+...
T Consensus 34 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-------~~~~~~-----~~~~~~~la~~l~~~~p-- 99 (423)
T PRK05964 34 AYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDH-------VIFAGF-----THEPAERLAQRLVALTP-- 99 (423)
T ss_pred cEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCC-------cccccc-----CCHHHHHHHHHHHHhCC--
Confidence 34444556778898655 33332 35555555544321000 000011 13455667777765421
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhcC-------C-CCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecC
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILAD-------P-GDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCD 175 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~ 175 (442)
-..+.+++++++++|++.+++.... + ..+|+...-+|.+....+....+- .+..++..
T Consensus 100 --~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~ 177 (423)
T PRK05964 100 --GGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFP 177 (423)
T ss_pred --CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCC
Confidence 1236899999999999998876521 2 357888888887754332211111 11222221
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 176 SSNNFQITPQALEAAYKEAESKDMRVRGVLITN-PSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~-P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
..+....+.+.+++.+.+. +.++.+|++.. .++.+|... +.+.+++|.++|++||+++|+||++..+...|..+.
T Consensus 178 ~~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a 254 (423)
T PRK05964 178 PDGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFA 254 (423)
T ss_pred cchhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhH
Confidence 1000011267777777642 23565655543 367778765 888899999999999999999999987655443211
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHc--------cccCCCcHHHHHHHHHHhcC
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRM--------SSFTLISSQTQYLLASMLSN 324 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~--------~~~~~~s~~~q~~~~~~l~~ 324 (442)
. +.. +...-+.++||+++ .| +++|++++ ++.+.+.+... ...+..++++..++.+.++-
T Consensus 255 -~-~~~--------~v~pDi~~~~K~l~-gG~~p~~av~~-~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~ 322 (423)
T PRK05964 255 -C-EQA--------GVSPDIMCLSKGLT-GGYLPLAATLC-TAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDL 322 (423)
T ss_pred -H-Hhc--------CCCCCeeeeehhhh-cCcccceEEEE-cHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHH
Confidence 1 110 11112347899997 55 89999888 67777665421 11234566776666666552
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee--cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCC
Q 046900 325 KKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECL--KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGS 401 (442)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~ 401 (442)
.+ + ....+...+.-+++.+.|++. ..... ...-|+++.+.+..... ......+...|+++ ||.+.+.
T Consensus 323 l~---~--~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~---~~~~~~l~~~l~~~-Gv~v~~~- 392 (423)
T PRK05964 323 FE---D--EPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVL---ERDGPALRAFALER-GVLLRPL- 392 (423)
T ss_pred HH---h--cCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcc---hhHHHHHHHHHHHC-CeEEEec-
Confidence 11 0 112233333344444444433 22211 12335566666643210 01245777788776 9999873
Q ss_pred CCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 402 SCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 402 ~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
.+.+|++.. .++++++++++++|.+++++
T Consensus 393 ------~~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 393 ------GNTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred ------CCEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 136999976 34999999999999999865
No 269
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.75 E-value=1.1e-15 Score=149.95 Aligned_cols=338 Identities=14% Similarity=0.121 Sum_probs=196.6
Q ss_pred CCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+|||..+ .+.++ .+.+.+.+.+..... ...+ ...+.++...+|+++.+.. .
T Consensus 32 d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~-----------~~~~--~~~~~~~~~~la~~l~~~~------~ 92 (395)
T PRK03715 32 DHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKL-----------INPS--PAFYNEPMAKLAGLLTQHS------C 92 (395)
T ss_pred ECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhc-----------cccc--ccccCHHHHHHHHHHhhcc------C
Confidence 3445678898753 23332 355555444432210 0111 1123577788899887531 2
Q ss_pred CCcEEEecChHHHHHHHHHhhcC------CC-CeEEEcCCCCcChHHhHhhhcCcEEEE---EecCCCCCC----cCCHH
Q 046900 120 LNRIVVTAGATAANELLTFILAD------PG-DALLVPTPYYPGFDRDLRWRTGIKIVP---IHCDSSNNF----QITPQ 185 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~------~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~---v~~~~~~~~----~~d~~ 185 (442)
.+.+++++++++|+..+++.... +| ..|+..+.+|.+.........|..... .|.. .++ ..|++
T Consensus 93 ~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~--~~~~~~~~~d~~ 170 (395)
T PRK03715 93 FDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQV--PGFPKAELNDIA 170 (395)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCC--CCceeeCCchHH
Confidence 46899999999999999887741 23 568888888776543322123322111 1111 111 13678
Q ss_pred HHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcC
Q 046900 186 ALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQY 264 (442)
Q Consensus 186 ~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~ 264 (442)
.+++.+.+ ++.+|++...++..|... +.+.+++|.++|++||+++|+||++..+...|..+. ...+.-
T Consensus 171 ~l~~~l~~------~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a-~~~~gv---- 239 (395)
T PRK03715 171 SVEKLITD------KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFA-YELSGI---- 239 (395)
T ss_pred HHHHHcCC------CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhh-HhhcCC----
Confidence 88887753 566666664466677765 677899999999999999999999997544443211 111110
Q ss_pred CCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 046900 265 KDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRY 343 (442)
Q Consensus 265 ~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 343 (442)
.++ +.+++|.+| .|+.+|.+++. +.+...... ..+.+..++++.+++.+.|+.. ++ ....+.+++.-
T Consensus 240 -~PD----i~t~gK~lg-~G~p~~av~~~-~~i~~~~~~~~~~T~~g~pl~~aaala~L~~l---~~--~~l~~~~~~~g 307 (395)
T PRK03715 240 -EPD----IMTLGKGIG-GGVPLAALLAK-AEVAVFEAGDQGGTYNGNPLMTAVGVAVISQL---LA--PGFLEGVRARG 307 (395)
T ss_pred -CCc----eeeehhhhh-CCcceEEEEEc-cccccccCCCcCCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHH
Confidence 112 357899998 78999999984 444422111 1222344666666555555421 11 12344455555
Q ss_pred HHHHHHHHh----CCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cC
Q 046900 344 QMIIEGLRS----AGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NM 418 (442)
Q Consensus 344 ~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~ 418 (442)
+++.+.|++ .++.... .-|+++-+++..... ....+.+..+.++ ||.+.+. ....+|++.. .+
T Consensus 308 ~~l~~~L~~l~~~~~i~~vr-G~Glm~~i~l~~~~~----~~~~~~~~~~~~~-Gi~~~~~------~~~~lR~~p~l~~ 375 (395)
T PRK03715 308 EYLKEKLLELSEERGLEGER-GEGLLRALLLGKDIG----PQIVEKARDMQPD-GLLLNAP------RPNLLRFMPALNV 375 (395)
T ss_pred HHHHHHHHHHhhcCCcCeEE-cceeEEEEEecCchH----HHHHHHHHhccCC-CEEEeec------CCCEEEEeCCccc
Confidence 555555543 3443233 345677777754100 0112223333333 9998652 1257999986 45
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 046900 419 SEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 419 ~~e~i~~~l~~l~~~l~~~ 437 (442)
+++++++++++|.+++.++
T Consensus 376 t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 376 TTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998753
No 270
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.75 E-value=6.4e-16 Score=164.34 Aligned_cols=308 Identities=14% Similarity=0.099 Sum_probs=191.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCC--cEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhh--hcCcEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLN--RIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRW--RTGIKIVP 171 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~--~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~ 171 (442)
+.+.|+.||+|++ ++++ +|++|+|+|+++.+++.++ .++||.|++..-.|......... ..|+++..
T Consensus 80 ~e~aR~~ia~~lg--------a~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~ 151 (805)
T PLN02724 80 IESARQQVLEYFN--------APPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIA 151 (805)
T ss_pred HHHHHHHHHHHhC--------CCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEe
Confidence 5788888888876 4554 5899999999999999888 67899999987777765533221 36999999
Q ss_pred EecCC--------CCCCcCCHHHHHHHHHH----HHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc-----Cc
Q 046900 172 IHCDS--------SNNFQITPQALEAAYKE----AESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK-----NI 234 (442)
Q Consensus 172 v~~~~--------~~~~~~d~~~l~~~l~~----~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~-----~~ 234 (442)
++++. .+...++.+.|++.++. ....+.++++|.++.-+|-||.++|.+.+..+.+.+..+ ++
T Consensus 152 v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~ 231 (805)
T PLN02724 152 VDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRW 231 (805)
T ss_pred ccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcce
Confidence 88762 11111222556655321 001123568899999999999999977554444433222 36
Q ss_pred EEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHHccc-------
Q 046900 235 HLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMSS------- 306 (442)
Q Consensus 235 ~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~~------- 306 (442)
++++|.+++- +.....+..+..+ +++.|++|.+| ..| +|++++.++ +.+.+.....
T Consensus 232 ~v~vDaaQ~~----g~~piDv~~~~~D---------fl~~S~HK~~GgP~G--~G~L~vr~~-~~~~l~p~~~GGg~~~~ 295 (805)
T PLN02724 232 MVLLDAAKGC----GTSPPDLSRYPAD---------FVVVSFYKIFGYPTG--LGALLVRRD-AAKLLKKKYFGGGTVAA 295 (805)
T ss_pred EEEeehhhhc----CCCCCChhhcCCC---------EEEEecceeccCCCC--ceEEEEehh-hhhhhcCCccCCCceEE
Confidence 8999999873 3334455544333 67889999997 334 799988543 3333221100
Q ss_pred -------------------cCCCcHHHHHHHHHHhcCchhHHH-HHHHHHHHHHHHHHHHHHHHHhC-------CCeeec
Q 046900 307 -------------------FTLISSQTQYLLASMLSNKKFTEN-YIKTNRERLQKRYQMIIEGLRSA-------GIECLK 359 (442)
Q Consensus 307 -------------------~~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~ 359 (442)
.++.+.+...++.+.++ ++.+ .++...++..+..+++.+.|.++ +++++.
T Consensus 296 ~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~---~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg 372 (805)
T PLN02724 296 SIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK---LLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYG 372 (805)
T ss_pred EecccceeeccccHHHHhcCCCcchhHHHHHHHHHH---HHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcC
Confidence 01222233333333332 2222 24556677777888888888765 355554
Q ss_pred CC---------ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC------------------------
Q 046900 360 GN---------AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS------------------------ 406 (442)
Q Consensus 360 ~~---------~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~------------------------ 406 (442)
+. ++ .+.+.+..... ... .......|+.++||.++.|..|.+.
T Consensus 373 ~~~~~~~~~~r~~-ivsFnv~~~~~-~~v--~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~ 448 (805)
T PLN02724 373 NHTFKLEFHIQGP-IVTFNLKRADG-SWV--GHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCW 448 (805)
T ss_pred CCCCCCCcccccC-EEEEEEEcCCC-CEe--CHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccC
Confidence 32 23 33334432110 000 1222445666679999998776421
Q ss_pred ---------CCCEEEEEeecC-CHHHHHHHHHHHHHHHH
Q 046900 407 ---------EPGWFRVCFANM-SEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 407 ---------~~~~iRls~~~~-~~e~i~~~l~~l~~~l~ 435 (442)
..|++|+|++.. +.+|++++++.|++.+.
T Consensus 449 ~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 449 DDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred chhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 138899999833 89999999999999664
No 271
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=2.8e-15 Score=145.44 Aligned_cols=208 Identities=12% Similarity=0.107 Sum_probs=148.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH----hhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL----RWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~~G~~v~~v 172 (442)
...|.+.+|+..+ .+..+++++++.|+..++.+++++||+|+++...|.+....+ + ..|+++..+
T Consensus 64 ~~~le~~la~LEg----------~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~-~~Gi~v~~v 132 (395)
T PRK08114 64 HFSLQEAMCELEG----------GAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILS-KLGVTTTWF 132 (395)
T ss_pred HHHHHHHHHHHhC----------CCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHH-hcCcEEEEE
Confidence 3566666666532 567888999999999999999999999999999997766554 4 379998887
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc--CcEEEEeccCCcCCCCCC
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK--NIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~--~~~vi~De~y~~~~~~~~ 250 (442)
+. .|.+.+++++++ ++|+|++.+|+||+|.+.+ +++|+++|+++ ++++|+|.+++...
T Consensus 133 d~-------~d~~~l~~~l~~------~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~---- 192 (395)
T PRK08114 133 DP-------LIGADIAKLIQP------NTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGV---- 192 (395)
T ss_pred CC-------CCHHHHHHhcCC------CceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCcccc----
Confidence 63 367889988865 7899999999999999998 88888899898 49999999997422
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcc-cc-CCCcHHHHHHHHHHhcCchh
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMS-SF-TLISSQTQYLLASMLSNKKF 327 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~-~~-~~~s~~~q~~~~~~l~~~~~ 327 (442)
......+.. -+++.|.+|.++-+| .-.|.++. ++...+.++... .. ..+++...+.+..-++..
T Consensus 193 -~~~pl~~Ga---------Divv~S~tKyl~Ghsdv~~G~v~~-~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL-- 259 (395)
T PRK08114 193 -LFKALDFGI---------DISIQAGTKYLVGHSDAMIGTAVA-NARCWEQLRENSYLMGQMVDADTAYMTSRGLRTL-- 259 (395)
T ss_pred -ccCHHHcCC---------cEEEEcCcccccCCCcceeEEEEc-CHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCcH--
Confidence 223333433 388999999875454 67787766 444444333222 22 234555555555555442
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 328 TENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
.-+.++..++...+.+.|+++
T Consensus 260 -----~lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 260 -----GVRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred -----HHHHHHHHHHHHHHHHHHHcC
Confidence 333455566777888888875
No 272
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.74 E-value=1.7e-15 Score=134.41 Aligned_cols=329 Identities=14% Similarity=0.179 Sum_probs=211.8
Q ss_pred eeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecCh
Q 046900 50 VIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGA 129 (442)
Q Consensus 50 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~ 129 (442)
.+||-+..-..|.+.+++.+.++.. .-.-|+.......|.+.+|+.+++. .-+++++|.
T Consensus 23 ~vDLRSDTvT~PTdeMr~am~eA~v------------gDdVyGeD~tt~rLE~~vA~l~GKE---------AgLFv~SGT 81 (384)
T KOG1368|consen 23 SVDLRSDTVTVPTDEMRRAMAEASV------------GDDVYGEDPTTNRLEQRVAELFGKE---------AGLFVPSGT 81 (384)
T ss_pred ccccccccccCChHHHHHHHhhccc------------CcccccCCccHHHHHHHHHHHhCcc---------ceeeecccc
Confidence 3577777666777777777666542 1233555455689999999988742 336777776
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcChHHh--HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH--hcCCceeEEE
Q 046900 130 TAANELLTFILADPGDALLVPTPYYPGFDRD--LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE--SKDMRVRGVL 205 (442)
Q Consensus 130 ~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~--~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~--~~~~~~~~v~ 205 (442)
..-+-.+...+-++|..|++.+-+|--..+. +....|+.+.++...+++ .+|+++++++++... -+.+.+++|+
T Consensus 82 mgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dg--tm~ledIe~~ir~~~GD~H~p~T~LIc 159 (384)
T KOG1368|consen 82 MGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDG--TMDLEDIEAAIRVPKGDCHMPPTKLIC 159 (384)
T ss_pred cccHHHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeeeeCCCC--eeeHHHHHHhhcCCCCCccCCCceEEE
Confidence 6666556555666999999998877432221 121378888777655443 588999999997321 1245689999
Q ss_pred EeCCCCCCC-cCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC--CCcccHHHHHhhhcCCCCCcEEEEecCcccCCC
Q 046900 206 ITNPSNPLG-ATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS--SEFVSIAEILEARQYKDSERVHIVYSLSKDLGL 282 (442)
Q Consensus 206 l~~P~NPtG-~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~--~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 282 (442)
+.|.+|-+| .++|.+++.++.++|++|++-+..|.+-. |+. ....++..+... .+.|- -.|||.+|.
T Consensus 160 lENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi---~NAavasgV~vk~i~~~-----fDSVs--iCLSKglgA 229 (384)
T KOG1368|consen 160 LENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI---FNAAVASGVPVKKICSA-----FDSVS--ICLSKGLGA 229 (384)
T ss_pred eeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh---hhHHHHcCCCHHHHHHh-----hhhhh--hhhhccCCC
Confidence 999987666 99999999999999999999999999854 221 123456666554 23332 368999985
Q ss_pred CCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-Ceeec
Q 046900 283 PGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECLK 359 (442)
Q Consensus 283 ~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~ 359 (442)
| +|-++..+..+++..+.++.. +++-.....+++++..-.+ ... ..+.-.++...+.+.++..+ +++..
T Consensus 230 P---VGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~----~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v 301 (384)
T KOG1368|consen 230 P---VGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDE----NVP-LLRADHKRAKELAEYINTPEEIRVEV 301 (384)
T ss_pred C---cccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc----chH-HHHHHHHHHHHHHHHhccccceeeec
Confidence 4 788776677766665543332 2222222222223222111 112 22223345556667776654 77655
Q ss_pred C--CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHH
Q 046900 360 G--NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHN 432 (442)
Q Consensus 360 ~--~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~ 432 (442)
+ +.+ ++.+.+.... .++.++++.+.+ +||.+.+|..+ .+|+.+- .+++++++..+..+.+
T Consensus 302 ~a~etN-iv~~~l~q~~-----~~~~~l~~~~~k-~gi~lm~~~s~------r~Rivlh~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 302 PAVETN-IVNMVLCQAR-----LTAEELCKFLEK-NGILLMGGASR------RIRIVLHHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred chhhcc-eeeeeccccc-----CCHHHHHHHHHH-CCeEEeecccc------ceEEEEEEecCHHHHHHHHHHHHH
Confidence 4 444 5555543221 147888988855 59999987543 4899986 5588999999988843
No 273
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.74 E-value=4.3e-15 Score=141.13 Aligned_cols=340 Identities=15% Similarity=0.186 Sum_probs=211.6
Q ss_pred CCCCCceeeeecccccc----cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLAENQV----SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~~n~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+-.....||+..+-.++ .++.+.+.+.+.... -..|+.+ .++.-.+|+.+.++.. .
T Consensus 49 DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~------------G~~fg~P---te~Ei~~Aell~~~~p-----~ 108 (432)
T COG0001 49 DVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER------------GLSFGAP---TELEVELAELLIERVP-----S 108 (432)
T ss_pred eCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHh------------cCCCCCC---CHHHHHHHHHHHHhcC-----c
Confidence 34456778887765443 235566666655422 1345544 4667778888876533 3
Q ss_pred CCcEEEecChHHHHHHHHHhh--cCCCCeEEEcCCCCcChHHhHhhhcC--c-----------------EEEEEecCCCC
Q 046900 120 LNRIVVTAGATAANELLTFIL--ADPGDALLVPTPYYPGFDRDLRWRTG--I-----------------KIVPIHCDSSN 178 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~~G--~-----------------~v~~v~~~~~~ 178 (442)
.+.|-++|++|||...+++.. ....|+|+..+=||.+..+.+....| . .++.+|
T Consensus 109 ~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~----- 183 (432)
T COG0001 109 IEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP----- 183 (432)
T ss_pred ccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec-----
Confidence 489999999999999887654 12448899999999887766543232 1 111222
Q ss_pred CCcCCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCcCCCHHH-HHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 179 NFQITPQALEAAYKEAESKDMRVRGVLITNP-SNPLGATIQRSV-LEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 179 ~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~~~~~~-l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
|. |++.++++++++ +.++.+|++ -| ..-.|.+.|.++ ++.|.++|++|++++|.||+...|...-.......
T Consensus 184 -yN-D~~al~~~~~~~---g~~IAaVIv-EPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~ 257 (432)
T COG0001 184 -YN-DLEALEEAFEEY---GDDIAAVIV-EPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYY 257 (432)
T ss_pred -CC-CHHHHHHHHHHc---CCcEEEEEe-ccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccccc
Confidence 22 799999999874 345655544 45 333677665555 99999999999999999999887665422233444
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc-----cCCCcHHHHHHHHHHhcCchhHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS-----FTLISSQTQYLLASMLSNKKFTENY 331 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~-----~~~~s~~~q~~~~~~l~~~~~~~~~ 331 (442)
.+.++ +.+|.|..| .|+.+|.+.+ ..++.+.+..... ..+.++++..+..+.++... +
T Consensus 258 gi~PD-----------lttlGKiIG-GGlP~ga~gG-r~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~---~- 320 (432)
T COG0001 258 GVEPD-----------LTTLGKIIG-GGLPIGAFGG-RAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELM---T- 320 (432)
T ss_pred CcCcc-----------hhhhhhhhc-CCcceeeecc-HHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHH---h-
Confidence 44333 568999999 9999999988 5667665443221 13345666666555554211 0
Q ss_pred HHHHHHHHHHHHHHHHHHHH----hCCCeeec-CCceEEEEEecCCccc------ccChhhHHHHHHHHHHcCcEEEeCC
Q 046900 332 IKTNRERLQKRYQMIIEGLR----SAGIECLK-GNAGLFCWMNLSPLLE------EQTREGELALWDSMLHEVKLNISPG 400 (442)
Q Consensus 332 ~~~~~~~~~~~~~~l~~~L~----~~g~~~~~-~~~g~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~gi~v~pg 400 (442)
.....+++.+.-+.|.+.|+ ++|+++.. ..+++|-..-.+.... ..+.+.-..+...|+++ ||.+.|+
T Consensus 321 ~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps 399 (432)
T COG0001 321 EEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPS 399 (432)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCc
Confidence 00123444444455555554 45777654 3344443322221110 11112245666788888 9999985
Q ss_pred CCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 401 SSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 401 ~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
. | .. .=+|.+. +++++++.++++.+++++...
T Consensus 400 ~-~----ea-~flS~ah-te~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 400 Q-F----EA-GFLSTAH-TEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred c-c----cc-eeeeccc-CHHHHHHHHHHHHHHHHHhhc
Confidence 3 2 22 3378877 899999999999999887654
No 274
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.74 E-value=6.4e-15 Score=147.00 Aligned_cols=346 Identities=15% Similarity=0.096 Sum_probs=192.7
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE---
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV--- 125 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~--- 125 (442)
..|+|-..||..+....+......... +..|. ....-|+...-+.++.+...+...+.++ ...+.+++
T Consensus 35 ~~l~liasen~~s~~v~~a~~s~~~~k--y~~G~---~g~r~~~G~~~~d~lE~~~~~~~~~~f~----~~~~~~~~nv~ 105 (475)
T PLN03226 35 KGLELIASENFTSRAVMEALGSCLTNK--YSEGL---PGARYYGGNEYIDQIETLCQKRALEAFR----LDPEKWGVNVQ 105 (475)
T ss_pred cCeeEecCCccCCHHHHHHHhhHHhcc--ccCCC---CCCcCcCCChhHHHHHHHHHHHHHHHhC----CCcceeEEecC
Confidence 457888889987754433322222111 00111 1112233333344444433333433333 33444433
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCC---CcChH---HhHhhhcCc----EEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPY---YPGFD---RDLRWRTGI----KIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~---y~~~~---~~~~~~~G~----~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
..+++.++..++.+|++|||+|+..+.. |.... ...+. .+. +++++.++.+ +..+|+++|++.+.+.
T Consensus 106 ~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~-s~~~~~~~~~~y~~~~~-~g~iD~d~Le~~l~~~- 182 (475)
T PLN03226 106 PLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKI-SATSIYFESMPYRLDES-TGLIDYDKLEKKAMLF- 182 (475)
T ss_pred cCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhccccc-ccceEEEEeeeeeecCC-CCCcCHHHHHHHHhhc-
Confidence 2566889999999999999999985532 22211 11111 122 2224444542 3568999999998753
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEec
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYS 275 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S 275 (442)
++++|++ ..++ +|...+ +++|.++|+++|+++++|++|...........+... ..-++++|
T Consensus 183 ----~pklIv~-~~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~----------~~Div~~t 243 (475)
T PLN03226 183 ----RPKLIIA-GASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE----------YCDVVTTT 243 (475)
T ss_pred ----CCeEEEE-ecCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC----------CCeEEEec
Confidence 5665544 3333 566666 667888899999999999999865543322111111 12377899
Q ss_pred CcccCCCCCceeEEEeecCHH-------------HHHHHHHccc--c-CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q 046900 276 LSKDLGLPGFRVGTIYSYNDK-------------VVTTARRMSS--F-TLISSQTQYLLASMLSNKKFTENYIKTNRERL 339 (442)
Q Consensus 276 ~SK~~g~~G~RiG~i~~~~~~-------------~~~~~~~~~~--~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 339 (442)
++|++ .|.+.|++++++.. ..+.++.... + ++.++....++...++.. .....++.++++
T Consensus 244 ~hK~L--~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i--~~~~~~~~~~~~ 319 (475)
T PLN03226 244 THKSL--RGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA--MTPEFKAYQKQV 319 (475)
T ss_pred Ccccc--cCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH--hCcCHHHHHHHH
Confidence 99988 33344999884431 1112221111 2 222222222222333211 011134567888
Q ss_pred HHHHHHHHHHHHhCCCeeecCC-ceEEEEEecCC-cccccChhhHHHHHHHHHHcCcEEEeCCCCCCC---CCCCEEEEE
Q 046900 340 QKRYQMIIEGLRSAGIECLKGN-AGLFCWMNLSP-LLEEQTREGELALWDSMLHEVKLNISPGSSCHC---SEPGWFRVC 414 (442)
Q Consensus 340 ~~~~~~l~~~L~~~g~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~---~~~~~iRls 414 (442)
.++.++|.+.|.+.|+++..+. .+..+++++.. ... ..++... +++.||.+..+...+. -.+..+|++
T Consensus 320 ~~na~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~------~~~~~~~-L~~~~I~~nk~~~p~~~~~~~~~giRiG 392 (475)
T PLN03226 320 KANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLT------GSRVEKV-LDLAHITLNKNAVPGDSSALVPGGVRIG 392 (475)
T ss_pred HHHHHHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCC------HHHHHHH-HHHCCCEECCCCCCCCcccCCCCCcccC
Confidence 8889999999998999987632 23466677743 221 3344444 4566999986543221 123458985
Q ss_pred ee-----cCCHHHHHHHHHHHHHHHHH
Q 046900 415 FA-----NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 415 ~~-----~~~~e~i~~~l~~l~~~l~~ 436 (442)
.. .++++++++..+.|.++++.
T Consensus 393 t~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 393 TPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred cHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 43 34789999999999998873
No 275
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.73 E-value=5.7e-15 Score=141.23 Aligned_cols=283 Identities=21% Similarity=0.220 Sum_probs=185.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hcCcEEEEEe
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RTGIKIVPIH 173 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~~v~ 173 (442)
...|.++++.+.+ .++.+.++++..||..++.+|+++||+|+++...|.+....+.. ..|+++.+++
T Consensus 65 ~~~lE~~~a~LEg----------~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d 134 (396)
T COG0626 65 RDALEEALAELEG----------GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVD 134 (396)
T ss_pred HHHHHHHHHHhhC----------CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEEC
Confidence 4677777777653 67799999999999999999999999999999999875544321 3888888776
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
.. +.+.+++++.+ +++|+|++..|+|||-.+.+ +.+|+++|+++|+++|+|..|+..++ .
T Consensus 135 ~~-------~~~~~~~~~~~-----~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~-----q 194 (396)
T COG0626 135 PG-------DDEALEAAIKE-----PNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVL-----Q 194 (396)
T ss_pred CC-------ChHHHHHHhcc-----cCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccc-----c
Confidence 32 44566666542 27999999999999988877 88889999999999999999985332 2
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHH-Hcc-cc-CCCcHHHHHHHHHHhcCchhHH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTAR-RMS-SF-TLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~-~~~-~~-~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
....+. --|+++|.+|.++-.+ .=.|.++++++.+.+.+. ... .. ..+++...+.+..-+++.
T Consensus 195 ~PL~~G---------aDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkTL---- 261 (396)
T COG0626 195 RPLELG---------ADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRTL---- 261 (396)
T ss_pred ChhhcC---------CCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccchH----
Confidence 233333 3388999999985232 445767766777776652 222 23 345666666666666543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCe-eecC-----------------CceEEEEEecCCcccccChhhHHHHHHHHH
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSA-GIE-CLKG-----------------NAGLFCWMNLSPLLEEQTREGELALWDSML 390 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-----------------~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~ 390 (442)
.-+.++..++...+.+.|++. .++ ++-| -|| .+.+++... +...++.+.|
T Consensus 262 ---~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg-~~Sf~l~~~------~~~~~f~~~L- 330 (396)
T COG0626 262 ---ALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGG-LFSFELKNE------EAAKKFLDSL- 330 (396)
T ss_pred ---HHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCce-EEEEEeCCh------HHHHHHHHhC-
Confidence 233444556677788888775 222 2222 344 444565542 1244444443
Q ss_pred HcCcEEEeCCCCCCC---------------------CCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 391 HEVKLNISPGSSCHC---------------------SEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 391 ~~~gi~v~pg~~f~~---------------------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
+--.+...-|..... -.++.+|||++. |+.+.+++-|.+++.+
T Consensus 331 ~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~ 394 (396)
T COG0626 331 KLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAK 394 (396)
T ss_pred CccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHh
Confidence 221222233322110 124679999996 4566777777777765
No 276
>PLN02880 tyrosine decarboxylase
Probab=99.73 E-value=5.4e-15 Score=148.25 Aligned_cols=328 Identities=15% Similarity=0.123 Sum_probs=206.5
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCccC---CCcEEEecChHHHHHHHHHhhcC-----------CCCeEEEcCCCCcC
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFD---LNRIVVTAGATAANELLTFILAD-----------PGDALLVPTPYYPG 156 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~---~~~i~~t~G~~~ai~~~~~~l~~-----------~gd~Vl~~~p~y~~ 156 (442)
|....+..++.+.+.+|+.+.+|.+-... ...-++|+|+|+++..++.+..+ +.-.|++.+-+|..
T Consensus 114 ~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~S 193 (490)
T PLN02880 114 WITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSA 193 (490)
T ss_pred cccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHH
Confidence 33344678999999999999887321100 12477899999988766544321 11245567888999
Q ss_pred hHHhHhhhcCc---EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcC
Q 046900 157 FDRDLRWRTGI---KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN 233 (442)
Q Consensus 157 ~~~~~~~~~G~---~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~ 233 (442)
+..++.. +|+ .++.||.+..+++.+|++.|+++|.+....|..+-+|+-+-.+.+||.+.| +++|+++|++||
T Consensus 194 v~Kaa~~-lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~ 269 (490)
T PLN02880 194 LQKACQI-AGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNG 269 (490)
T ss_pred HHHHHHH-cCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcC
Confidence 9999985 888 478899886667899999999999877666666666677777889999988 888889999999
Q ss_pred cEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHH-HHHHHHcccc-----
Q 046900 234 IHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKV-VTTARRMSSF----- 307 (442)
Q Consensus 234 ~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~-~~~~~~~~~~----- 307 (442)
+|+.+|.+|+.+....+. ........ ..---+..+++|.++ ....+|.++..+... ...+.....+
T Consensus 270 iwlHVDaA~gg~~~~~~~---~~~~l~gi----e~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~ 341 (490)
T PLN02880 270 MWFHVDAAYAGSACICPE---YRHYIDGV----EEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSLSTNPEFLKNKA 341 (490)
T ss_pred CEEEEehhhHHHHHhCHH---HHHHhcCc----hhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHHHccCHHHhcCcc
Confidence 999999999975432211 11111110 011135679999985 778899999865332 2222111100
Q ss_pred -----------CC--C-c---HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC-CceEEEEE
Q 046900 308 -----------TL--I-S---SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKG-NAGLFCWM 368 (442)
Q Consensus 308 -----------~~--~-s---~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~g~~~~~ 368 (442)
+. . . .+..++....+. .+.+.+..+..-+..+++.+.|++. ++++..+ ..+ .+.+
T Consensus 342 ~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G-----~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~-iv~F 415 (490)
T PLN02880 342 SQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYG-----VENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFS-LVCF 415 (490)
T ss_pred ccccCCCChhccCcCCCCcccHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceE-EEEE
Confidence 00 0 0 111111122222 2233444444446777888888765 7887654 444 4455
Q ss_pred ecCCc-ccccC-hhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecC--CHHHHHHHHHHHHHHHHHHHh
Q 046900 369 NLSPL-LEEQT-REGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANM--SEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 369 ~~~~~-~~~~~-~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~--~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+++.. ..... ..-..++.++|.++..+.+.+.. + .+..++|+++.+. ++++++.+++.|.++.+++..
T Consensus 416 r~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~-~--~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 416 RLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTV-L--SGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred EEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEE-E--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 65431 11000 00124566777776566666532 2 3457899998632 679999999999988776543
No 277
>PRK06541 hypothetical protein; Provisional
Probab=99.73 E-value=5.6e-15 Score=147.42 Aligned_cols=359 Identities=14% Similarity=0.075 Sum_probs=201.0
Q ss_pred CCCCCCCCceeeeeccc--cccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCC
Q 046900 41 YEESTNPSGVIQMGLAE--NQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRA 116 (442)
Q Consensus 41 ~~~~~~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 116 (442)
|..+.....+||+..+- ..++ ++.+.+.+.++.... ..+.......+.+..+|+.+.+...
T Consensus 45 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~------------~~~~~~~~~~~~~~~la~~l~~~~p--- 109 (460)
T PRK06541 45 YIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTL------------AFFPLWSYAHPPAIELAERLAALAP--- 109 (460)
T ss_pred EEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhC------------cCccccccCCHHHHHHHHHHHHhCC---
Confidence 33345567788886542 3333 355555555443211 0011111123444556666654321
Q ss_pred ccCCCcEEEecChHHHHHHHHHhhcC--------CCCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCC
Q 046900 117 KFDLNRIVVTAGATAANELLTFILAD--------PGDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDS 176 (442)
Q Consensus 117 ~~~~~~i~~t~G~~~ai~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~ 176 (442)
...+.+++++++++|++.+++.... ....|+...-+|.+....+....|. .+..+|...
T Consensus 110 -~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~ 188 (460)
T PRK06541 110 -GDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTN 188 (460)
T ss_pred -CCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCc
Confidence 1236899999999999988775421 1367888777777654322211111 122222211
Q ss_pred CCC---CcCC--------HHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCcCCC-HHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 177 SNN---FQIT--------PQALEAAYKEAESKDMRVRGVLITNP-SNPLGATIQ-RSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 177 ~~~---~~~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~~~-~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
... |.-+ ++.+++.+.+. +.+..+.++..| ++++|.+.+ .+-+++|.++|++||+++|.||++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~t 265 (460)
T PRK06541 189 FYRAPELGDDPEAFGRWAADRIEEAIEFE---GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVIC 265 (460)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHhc---CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 000 1112 25566666431 123345566667 889998765 7779999999999999999999997
Q ss_pred cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc-eeEEEeecCHHHHHHHHHc-c-----ccCCCcHHHHH
Q 046900 244 GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARRM-S-----SFTLISSQTQY 316 (442)
Q Consensus 244 ~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~-RiG~i~~~~~~~~~~~~~~-~-----~~~~~s~~~q~ 316 (442)
.+...+..+ ...... .... + -+|||.++ .|+ ++|++++ .+.+.+.+... . ..+..++++.+
T Consensus 266 GfGR~G~~~-a~~~~g------v~PD-i--vt~gK~l~-~G~~pigav~~-~~~i~~~~~~~~~~~~~~~T~~gnp~~~a 333 (460)
T PRK06541 266 AFGRLGEMF-GCERFG------YVPD-I--ITCAKGIT-SGYSPLGAMIA-SDRLFEPFLDGPTMFLHGYTFGGHPVSAA 333 (460)
T ss_pred CCCcCchhh-hhhhcC------CCCC-E--EEeccccc-CCccceeEEEE-cHHHHHHhhcCCCccccCCCCCCCHHHHH
Confidence 653333221 111111 0122 2 26899998 897 9999999 45555554321 1 12334566666
Q ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCee--ecCCceEEEEEecCCcccc-cCh-----h--hHHHH
Q 046900 317 LLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIEC--LKGNAGLFCWMNLSPLLEE-QTR-----E--GELAL 385 (442)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~~~~g~~~~~~~~~~~~~-~~~-----~--~~~~l 385 (442)
++.+.++.. .+ ....+.++++.+++.+.|+++ ...+ ....-|.++-+++...... ..+ . ....+
T Consensus 334 aala~l~~l---~~--~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~ 408 (460)
T PRK06541 334 VALANLDIF---ER--EGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFL 408 (460)
T ss_pred HHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHH
Confidence 555555421 11 134456666777777777664 2222 1223345666666321100 000 0 01246
Q ss_pred HHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 386 WDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 386 ~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
...|+++ ||.+.+.. .+...+||+.. .++++++++++++|.+++.+...|
T Consensus 409 ~~~l~~~-Gi~~~~~~----~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~~ 459 (460)
T PRK06541 409 SPALFEA-GLYCRADD----RGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAWAR 459 (460)
T ss_pred HHHHHhC-CeEEEecC----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6777776 99998731 12357999987 449999999999999999876554
No 278
>PRK02769 histidine decarboxylase; Provisional
Probab=99.73 E-value=1e-14 Score=141.74 Aligned_cols=290 Identities=13% Similarity=0.123 Sum_probs=194.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcE--EEecChHHHHHHHHHhh--cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRI--VVTAGATAANELLTFIL--ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i--~~t~G~~~ai~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v 172 (442)
..++.+.+.+++.+.+| ++++++ ++|+|+|+++...+... ..+++.|++++-.|+....+++. .|.+...+
T Consensus 63 ~~~~e~~~~~~~a~l~g----~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~-lg~~~~~V 137 (380)
T PRK02769 63 SFDFERDVMNFFAELFK----IPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARL-LRIKSRVI 137 (380)
T ss_pred hHHHHHHHHHHHHHHhC----CCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHH-cCCCCcee
Confidence 45677777777777665 455554 89999999987665433 24678999999999999999885 89988888
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcC---cEEEEeccCCcCCCCC
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN---IHLVSDEIYSGSAFSS 249 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~---~~vi~De~y~~~~~~~ 249 (442)
+.++ ...+|+++|++.+.+. +.++.+|+++.++|+||.+.+ +++|.++|+++| +++++|.+++.+...-
T Consensus 138 ~~~~--~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~ 209 (380)
T PRK02769 138 TSLP--NGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPF 209 (380)
T ss_pred ccCC--CCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecc
Confidence 8875 4569999999999862 345888899999999999988 777788888998 7999999998644321
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc---------cCCCc---HHHHHH
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS---------FTLIS---SQTQYL 317 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~---------~~~~s---~~~q~~ 317 (442)
.......++. .+-..+..|.+|.++ ....+|.++..++.+. .+..... .++-+ .+...+
T Consensus 210 ~~~~~~~d~~-------~~vDsis~s~HK~~~-~P~g~G~l~~r~~~~~-~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~ 280 (380)
T PRK02769 210 VNNPPPFSFA-------DGIDSIAISGHKFIG-SPMPCGIVLAKKKYVE-RISVDVDYIGSRDQTISGSRNGHTALLLWA 280 (380)
T ss_pred cCccccCCcc-------CCCCEEEECCcccCC-CCCCcEEEEEehhhhh-hcccCccccCCCCCCccCCCCcHHHHHHHH
Confidence 0000000010 022345679999876 4456899988654433 2211011 01111 233333
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEE
Q 046900 318 LASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNI 397 (442)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v 397 (442)
+...+.. .-+++..+...+..+++.+.|++.|++.........+.++.+. . ++. + |..+
T Consensus 281 aL~~lg~-----~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~~~~---------~-~~~-----~-~w~l 339 (380)
T PRK02769 281 AIRSLGS-----KGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVVFPCPS---------E-RIW-----K-KWHL 339 (380)
T ss_pred HHHHHCH-----HHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEcCCC---------H-HHH-----h-CeeE
Confidence 3333332 2356677778888889999998888887654444455555443 1 221 3 6666
Q ss_pred eCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 398 SPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 398 ~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
.+- ++++|+++. ..+.+.++++++.|...+..
T Consensus 340 ~~~-------~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 340 ATS-------GNQAHIITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred ccc-------CCEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 542 247999886 44788899999999887663
No 279
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.73 E-value=1.9e-15 Score=143.56 Aligned_cols=170 Identities=22% Similarity=0.408 Sum_probs=133.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD 175 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~ 175 (442)
..++.+++|+|++ ....+.++++|.|+.+++++| ..|||.|+++.-+|....+.+.. .|++++.+++|
T Consensus 36 v~~FE~~~ae~~G----------~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~~-~Ga~PVFvDid 104 (374)
T COG0399 36 VRRFEQAFAEYLG----------VKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVLL-VGAKPVFVDID 104 (374)
T ss_pred HHHHHHHHHHHhC----------CCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHHH-cCCeEEEEecC
Confidence 4789999999976 677889999999999999966 58999999999999999998885 99999999998
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC-CCCCCccc
Q 046900 176 SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA-FSSSEFVS 254 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~-~~~~~~~s 254 (442)
++ .|.+|++.+|++|++ ++|+|+.++ --|...+ +++|.++|++||++||+|.+++... |.++..-+
T Consensus 105 ~~-T~nid~~~ie~aIt~------~tKAIipVh---l~G~~~d---m~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt 171 (374)
T COG0399 105 PD-TLNIDPDLIEAAITP------RTKAIIPVH---LAGQPCD---MDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGS 171 (374)
T ss_pred Cc-ccCCCHHHHHHHccc------CCeEEEEeh---hccCCCC---HHHHHHHHHHcCCeEEEEcchhccCeecCccccc
Confidence 64 688999999999986 799998664 3454444 7788888889999999999988421 22221111
Q ss_pred HHHHHhhhcCCCCCcEEEEecC--cccCCCCCceeEEEeecCHHHHHHHHHcc
Q 046900 255 IAEILEARQYKDSERVHIVYSL--SKDLGLPGFRVGTIYSYNDKVVTTARRMS 305 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~--SK~~g~~G~RiG~i~~~~~~~~~~~~~~~ 305 (442)
+ + .+.+.|| +|.+. +| -.|.++++++++.+.++.++
T Consensus 172 ---~---------G-d~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr 209 (374)
T COG0399 172 ---F---------G-DIGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLR 209 (374)
T ss_pred ---c---------c-ceEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHH
Confidence 1 1 1344566 79887 66 77999998888888776543
No 280
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=9.7e-15 Score=135.37 Aligned_cols=348 Identities=14% Similarity=0.152 Sum_probs=220.6
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecC
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAG 128 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G 128 (442)
..|+|=..||..+....+..-...... +.+| ++...-|+...-...+.+...+..++.+| ++--||-..+|
T Consensus 27 ~~ieLIASEN~~S~aV~~A~gS~ltnK--YAEG---yPgkRyYgGce~VD~vE~laierak~LFg----a~~anVQPhSG 97 (413)
T COG0112 27 EHIELIASENFTSPAVMEAQGSDLTNK--YAEG---YPGKRYYGGCEYVDEVEELAIERAKKLFG----AEYANVQPHSG 97 (413)
T ss_pred hceeeeeccccCCHHHHHHHhhhhhhc--cccC---CCCccccCCCeeHHHHHHHHHHHHHHHhC----CCccccCCCCc
Confidence 447887788876644333211111100 0011 12233455555556666667777777776 56678888887
Q ss_pred hHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH-hh-hcC--cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 129 ATAANELLTFILADPGDALLVPTPYYPGFDRDL-RW-RTG--IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 129 ~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~-~~G--~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
++ |+..++.+|++|||+|+-.+-.+.++...- .. ..| .+++.++++.+ ...+|.|++++...+. ++|+|
T Consensus 98 s~-AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~-----kPK~i 170 (413)
T COG0112 98 SQ-ANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEV-----KPKLI 170 (413)
T ss_pred hH-HHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHh-----CCCEE
Confidence 54 677788999999999998888777654321 10 122 47778888754 4579999999999875 88877
Q ss_pred EEeCCCCCCCcCCCHH-HHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 205 LITNPSNPLGATIQRS-VLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~-~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
+.- ++.|+.. +.+++.++|.+.|.++++|-+|....-.+..+++..... -++.+|.+|+| +
T Consensus 171 i~G------~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~A----------dvVTtTTHKTl--r 232 (413)
T COG0112 171 IAG------GSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHA----------DVVTTTTHKTL--R 232 (413)
T ss_pred EEC------ccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCcc----------ceEeCCcccCC--C
Confidence 763 3344333 377888888899999999999864332333333332221 26789999998 7
Q ss_pred CceeEEEeecCHHHHHHHHHccccCCCcHHHHH-HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-C
Q 046900 284 GFRVGTIYSYNDKVVTTARRMSSFTLISSQTQY-LLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKG-N 361 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~ 361 (442)
|-|-|.|++.++++.+.+++...++..+.+... +++.+..-.+.++--.++..++..++.+.|.+.|.+.|+++... .
T Consensus 233 GPrGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgT 312 (413)
T COG0112 233 GPRGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGT 312 (413)
T ss_pred CCCceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCc
Confidence 889999999767888888776555444333222 22222221122222235667778889999999999999998763 2
Q ss_pred ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEe----CCCCCCCCCCCEEEEEeec-----CCHHHHHHHHHHHHH
Q 046900 362 AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNIS----PGSSCHCSEPGWFRVCFAN-----MSEQTLEVALKRIHN 432 (442)
Q Consensus 362 ~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~----pg~~f~~~~~~~iRls~~~-----~~~e~i~~~l~~l~~ 432 (442)
-+-.+.+++... . -..+.++.++++.||.+. |...-.+..+..|||+... +.++++++..+.|.+
T Consensus 313 dnHl~lVDl~~~-~-----~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~ 386 (413)
T COG0112 313 DNHLVLVDLRSK-G-----LTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIAD 386 (413)
T ss_pred cceEEEEEcccC-C-----CCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHH
Confidence 233456777631 1 023456677788899986 3221111123459998752 367888888888888
Q ss_pred HHHH
Q 046900 433 FMQK 436 (442)
Q Consensus 433 ~l~~ 436 (442)
++..
T Consensus 387 vl~~ 390 (413)
T COG0112 387 VLDG 390 (413)
T ss_pred HHhc
Confidence 8765
No 281
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.72 E-value=2.2e-14 Score=142.88 Aligned_cols=362 Identities=12% Similarity=0.068 Sum_probs=200.9
Q ss_pred CCCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+.....+||+..+. ..+ .++.+.+.+.++.... ...+.. .-..+.+..+|+.+.+....
T Consensus 31 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~-----------~~~~~~-~~~~~~~~~lae~L~~~~p~- 97 (442)
T TIGR00709 31 CWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSG-----------LPLHTL-DLTTPLKDAFIEALLNIIPK- 97 (442)
T ss_pred cEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhc-----------cCcccc-ccCcHHHHHHHHHHHHhCCC-
Confidence 334445567788986553 323 3355555555443210 000000 01135666677777654220
Q ss_pred CccCCCc-EEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCCCCC-
Q 046900 116 AKFDLNR-IVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDSSNN- 179 (442)
Q Consensus 116 ~~~~~~~-i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~~~~- 179 (442)
...... +++++++++|++.+++... .....|+...-+|.+....+....|. .+..++......
T Consensus 98 -~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (442)
T TIGR00709 98 -RKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRC 176 (442)
T ss_pred -cCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccc
Confidence 001124 4556899999998877542 22357888888887765443311221 122222211100
Q ss_pred -CcC----CHHH----HHHHHHHHHhcCCceeEEEEeCCC-CCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 180 -FQI----TPQA----LEAAYKEAESKDMRVRGVLITNPS-NPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 180 -~~~----d~~~----l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
|.. +.+. +++.+.+......++.++++.... |+.....|.+-+++|.++|++||+++|.||++..|...+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG 256 (442)
T TIGR00709 177 PFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG 256 (442)
T ss_pred cccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC
Confidence 110 1222 233332111112356666666544 444455788899999999999999999999999876666
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHH-HccccCCCcHHHHHHHHHHhcCchhH
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR-RMSSFTLISSQTQYLLASMLSNKKFT 328 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~-~~~~~~~~s~~~q~~~~~~l~~~~~~ 328 (442)
. +.....+.- .+.++ ++||.++ .|+++|+++++++ +..... .....+..+++++.++.+.|+..+
T Consensus 257 ~-~~a~~~~gv------~PDiv---~~gK~l~-~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~-- 322 (442)
T TIGR00709 257 T-MFAFEHAGI------EPDFV---VMSKAVG-GGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWK-- 322 (442)
T ss_pred c-hhHHHHcCC------CCcEE---EEccccc-CCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHH--
Confidence 4 222222211 12222 3899998 5999999999544 422211 122335568888888888875321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCCcccc--------cChhhHHHHHHHHHHcCcEE
Q 046900 329 ENYIKTNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSPLLEE--------QTREGELALWDSMLHEVKLN 396 (442)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~l~~~l~~~~gi~ 396 (442)
+ ....+.++++.+++.+.|++ +++......-|+++.+++...... ........+...++++ ||+
T Consensus 323 ~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl 398 (442)
T TIGR00709 323 D---DNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFEN-GLL 398 (442)
T ss_pred h---cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHC-CeE
Confidence 1 12333444455555555543 232222334566777777432100 0011245666777676 999
Q ss_pred EeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 397 ISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 397 v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+.++.. ....+|+..+ .+++++++++++++.+++.+.
T Consensus 399 ~~~~~~----~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 399 LETGGR----EGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred EeecCC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 976432 2357898876 459999999999999998765
No 282
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=7.9e-15 Score=144.83 Aligned_cols=156 Identities=21% Similarity=0.315 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH----hHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR----DLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~G~~v~~v 172 (442)
...+++.+|++++ . ...|++++| +.++.+++.+++++||+|+++...|..... .+. ..|+++..+
T Consensus 71 ~~~le~~la~l~g--------~-~~~v~fsSG-~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~-~~Gi~v~~v 139 (437)
T PRK05613 71 VEALENRIASLEG--------G-VHAVAFASG-QAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLN-RLGIEVTFV 139 (437)
T ss_pred HHHHHHHHHHHhC--------C-CeEEEeCCH-HHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHH-hcCeEEEEE
Confidence 4566777777654 1 334555555 588888888888999999999999987642 334 489999988
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+ +. .|++.+++++++ ++++|++..|+||+|.+.+ +++|.++|+++|+++|+|.+++... ..
T Consensus 140 d-~~-----~d~e~l~~~l~~------~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~----~~ 200 (437)
T PRK05613 140 E-NP-----DDPESWQAAVQP------NTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAA----LV 200 (437)
T ss_pred C-CC-----CCHHHHHHhCCc------cCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcccc----cc
Confidence 7 32 278999998875 7888998899999999888 7788888899999999999986422 11
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEee
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYS 292 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~ 292 (442)
....+ +--+++.|++|.++-.|--+|-+++
T Consensus 201 -~p~~~---------GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 201 -RPLEL---------GADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred -ChHHh---------CCCEEEeeccceecCCCcceeEEEE
Confidence 22222 2237889999998755554554444
No 283
>PLN02590 probable tyrosine decarboxylase
Probab=99.72 E-value=2.5e-14 Score=143.64 Aligned_cols=329 Identities=15% Similarity=0.133 Sum_probs=208.7
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCcc---CCCcEEEecChHHHHHHHHHhhcC-----------CCCeEEEcCCCCc
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKF---DLNRIVVTAGATAANELLTFILAD-----------PGDALLVPTPYYP 155 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~---~~~~i~~t~G~~~ai~~~~~~l~~-----------~gd~Vl~~~p~y~ 155 (442)
.|....+..++.+.+.+|+.+.+|.+-.. ....-++++|+++++..++.+..+ +.-.|++.+.+|.
T Consensus 161 ~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~ 240 (539)
T PLN02590 161 TWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHS 240 (539)
T ss_pred CcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchH
Confidence 34445577899999999999998732110 013467889999988766544321 1125556788899
Q ss_pred ChHHhHhhhcCc---EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc
Q 046900 156 GFDRDLRWRTGI---KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK 232 (442)
Q Consensus 156 ~~~~~~~~~~G~---~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~ 232 (442)
.+..++.. +|+ +++.||.+..+++.+|++.|+++|.+....+..+-+|+-+-.+.+||.+=+ +.+|.++|++|
T Consensus 241 Sv~KAa~i-lGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp---l~~Ia~i~~~~ 316 (539)
T PLN02590 241 SFRKACLI-GGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP---LVPLGNIAKKY 316 (539)
T ss_pred HHHHHHHH-cCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHh
Confidence 99999885 887 688999987667899999999999876666666666676777889999866 88889999999
Q ss_pred CcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHH-HHHHHHH---cc---
Q 046900 233 NIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDK-VVTTARR---MS--- 305 (442)
Q Consensus 233 ~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~-~~~~~~~---~~--- 305 (442)
++|+.+|.+|+.+..-.+. ...+.... ..--=+..+++|.+. ...-+|.++..++. +...+.. +.
T Consensus 317 g~WlHVDaA~GG~al~~~~---~r~~~~Gi----e~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~~~YL~~~ 388 (539)
T PLN02590 317 GIWLHVDAAYAGNACICPE---YRKFIDGI----ENADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTNPEYLEFK 388 (539)
T ss_pred CCeEEEecchhhhhhcChh---hHHHhcCC----ccCCEEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcCHHHhCCc
Confidence 9999999999976532222 22222210 011123568999885 67889988886542 3222211 00
Q ss_pred --------cc----CCCc----HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEE
Q 046900 306 --------SF----TLIS----SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWM 368 (442)
Q Consensus 306 --------~~----~~~s----~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~ 368 (442)
.+ ...+ .+..+.+...+. .+-+++..+..-+..+++.+.+++. ++++..+..-..+.+
T Consensus 389 ~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G-----~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcF 463 (539)
T PLN02590 389 VSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYG-----SENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCF 463 (539)
T ss_pred ccccccCCCccccCCCCCCchHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEE
Confidence 00 0111 122222222222 2345666666777788888888776 688765433334444
Q ss_pred ecCC-ccccc-ChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecC--CHHHHHHHHHHHHHHHHHHH
Q 046900 369 NLSP-LLEEQ-TREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANM--SEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 369 ~~~~-~~~~~-~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~--~~e~i~~~l~~l~~~l~~~~ 438 (442)
+... ..... ...--.++.+++.+...+.+.+... .+..++|+++.+. ++++++.+++.|.+...++.
T Consensus 464 r~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~---~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 464 RLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTAL---SGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFT 534 (539)
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEE---CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4432 11100 0011346667776663444544322 3356899999732 78999999999998876653
No 284
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.71 E-value=2.1e-14 Score=142.81 Aligned_cols=310 Identities=13% Similarity=0.101 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCc---------
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGI--------- 167 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~--------- 167 (442)
+....+|+.+.+.... -..+.+++++++++|++.+++... ...++|+...-+|.+....+....|.
T Consensus 97 ~~~~~lAe~L~~~~p~---~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~ 173 (441)
T PRK05769 97 EPAVELAERLVEIAPG---GFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFF 173 (441)
T ss_pred HHHHHHHHHHHHhCCC---CCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCC
Confidence 4556677777653210 013689999999999999876542 22367888888887765332211111
Q ss_pred ----EEEEEecCCCC--CCc-CC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHh
Q 046900 168 ----KIVPIHCDSSN--NFQ-IT--------PQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATR 231 (442)
Q Consensus 168 ----~v~~v~~~~~~--~~~-~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~ 231 (442)
.+..++..... .|. -+ .+.+++.+.+......++.+|++..-....|... +.+.+++|.++|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~ 253 (441)
T PRK05769 174 PLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADK 253 (441)
T ss_pred CCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHH
Confidence 12233321100 011 01 2234442211100123555555543355667755 56679999999999
Q ss_pred cCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-ccccCCC
Q 046900 232 KNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-MSSFTLI 310 (442)
Q Consensus 232 ~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-~~~~~~~ 310 (442)
||+++|.||++..+...+..+ ....+.- ...++ +|||.+| .|+++|+++++ +.+...... ....+..
T Consensus 254 ~g~lli~DEv~tG~gr~G~~~-a~~~~gv------~pDiv---t~~K~l~-~G~p~gav~~~-~~i~~~~~~~~~~T~~g 321 (441)
T PRK05769 254 YGILLIDDEVQTGMGRTGKMF-AIEHFGV------EPDII---TLAKAIA-GGLPLGAVIGR-AELMFLPPGSHANTFGG 321 (441)
T ss_pred cCCEEEEechhhCCCccccee-hhhccCC------CCCEE---EEccccc-CCcccEEEEEe-hhhhhcCCCCCCCCCCc
Confidence 999999999999765444321 1111111 12222 5899998 89999999984 555443321 2222445
Q ss_pred cHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCceEEEEEecCCcccccChhhHHHHH
Q 046900 311 SSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALW 386 (442)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 386 (442)
+++++.++.+.|+- +++ ...+.+++.-++|.+.|++. ++......-|+++-+.+..............+.
T Consensus 322 ~p~~~aaa~a~L~~---l~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~ 395 (441)
T PRK05769 322 NPVAAAAALATLEE---LEE---GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVL 395 (441)
T ss_pred CHHHHHHHHHHHHH---HHH---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHH
Confidence 77787777777653 222 33444555555666655443 322222344567767664321111111245677
Q ss_pred HHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 387 DSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 387 ~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
..++++ ||++.+. +...+|++.. .++++++++++++|.+++.+
T Consensus 396 ~~~~~~-Gil~~~~------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 396 YEAFKR-GLLLLGA------GKSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred HHHHhC-CcEEecC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 777776 9998763 2356899876 45999999999999999875
No 285
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.71 E-value=2.9e-14 Score=138.11 Aligned_cols=359 Identities=13% Similarity=0.120 Sum_probs=213.1
Q ss_pred CCCCCCCCCceeeeeccccc--c--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAENQ--V--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~n~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+...+.+|||..+.+. + .++.+.+.++.+..... .....|..+ +-..++|+.+.....
T Consensus 48 ~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~--------h~~~~~~~~----e~~v~~ae~L~~~~p-- 113 (447)
T COG0160 48 AYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLN--------HTHTRDLYY----EPYVELAEKLTALAP-- 113 (447)
T ss_pred CEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhh--------cccCCcccc----hhHHHHHHHHHHhCC--
Confidence 44445566788999875432 2 34555655555432210 011222222 445556666654321
Q ss_pred Ccc-CCCcEEEecChHHHHHHHHHhh--cCCCCeEEEcCCCCcChHH-hHhhhcC-------------cEEEEEecCCC-
Q 046900 116 AKF-DLNRIVVTAGATAANELLTFIL--ADPGDALLVPTPYYPGFDR-DLRWRTG-------------IKIVPIHCDSS- 177 (442)
Q Consensus 116 ~~~-~~~~i~~t~G~~~ai~~~~~~l--~~~gd~Vl~~~p~y~~~~~-~~~~~~G-------------~~v~~v~~~~~- 177 (442)
- ....+++++++++|++.+++.- ......|+...-+|.+-.. .+.+ .| -.++.+|....
T Consensus 114 --~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galsl-T~~~~~~~~~~~~~~~~v~~~Pyp~~y 190 (447)
T COG0160 114 --GSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSL-TGSKPPYKAGFGPLPPGVYHVPYPNPY 190 (447)
T ss_pred --cccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHh-ccCccccccCCCCCCCCeEEecCCccc
Confidence 2 3467999999999999988764 1233567777767655322 2211 11 12444443321
Q ss_pred -CCCcCC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCC
Q 046900 178 -NNFQIT--------PQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAF 247 (442)
Q Consensus 178 -~~~~~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~ 247 (442)
+.|..+ .+.++..+........++.++++..-+.-.|.+. |.+-++++.++|++||+++|+||+...+..
T Consensus 191 r~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GR 270 (447)
T COG0160 191 RCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGR 270 (447)
T ss_pred cCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 122221 3344554443333344566666665578888755 555699999999999999999999999877
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHH-HccccCCCcHHHHHHHHHHhcCch
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR-RMSSFTLISSQTQYLLASMLSNKK 326 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~-~~~~~~~~s~~~q~~~~~~l~~~~ 326 (442)
+|. +..+-...-. .. +-++||.+| .|+.+|.++. .+++.+... ....++..++++.+++.+.|+..+
T Consensus 271 TG~-~fa~E~~gv~------PD---ivt~aK~ig-~G~Pl~avv~-r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie 338 (447)
T COG0160 271 TGK-MFAFEHFGVE------PD---IVTLAKSLG-GGLPLSAVVG-RAEIMDWPPGGHGGTFGGNPVACAAALAVLDVIE 338 (447)
T ss_pred ccc-chhhhhcCCC------CC---EEEeccccc-CCCceeEEec-cHHhcccCCcccCCCCCcCHHHHHHHHHHHHHHH
Confidence 773 3333322211 22 347899999 6999999999 566665322 333446678888887777776322
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeec--CCceEEEEEecCCccc--ccChhhHHHHHHHHHHcCcEEEeCC
Q 046900 327 FTENYIKTNRERLQKRYQMIIEGLRSA--GIECLK--GNAGLFCWMNLSPLLE--EQTREGELALWDSMLHEVKLNISPG 400 (442)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~g~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~gi~v~pg 400 (442)
++ .+.++..+.-+++.+.|.++ ...++. -.-|+++-+++-.... ....+....++.+++++ |+.+..+
T Consensus 339 --~e---~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~-Glil~~~ 412 (447)
T COG0160 339 --EE---NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFER-GLLLLTC 412 (447)
T ss_pred --Hc---cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHc-CCEEecc
Confidence 11 22223333333444444332 112222 3456788888754321 12233567888898888 9988875
Q ss_pred CCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 401 SSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 401 ~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
..+ .+.+||... .+++++++++++.|.+++...
T Consensus 413 G~~----~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 413 GPH----GNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CCC----CcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 433 467999886 558999999999999998764
No 286
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.71 E-value=6.9e-15 Score=142.80 Aligned_cols=206 Identities=14% Similarity=0.188 Sum_probs=136.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH----HhHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD----RDLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~~G~~v~~v 172 (442)
..+|.+.++++.+ .+..+++++++.||.+++.+++++||+|+++.+.|.... ..+. ..|++++.+
T Consensus 66 ~~~lE~~la~leg----------~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~-~~Gi~v~fv 134 (384)
T PRK06434 66 VQAFEEKYAVLEN----------AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLK-TLGIHVDYI 134 (384)
T ss_pred HHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHH-hcCcEEEEE
Confidence 4567777777754 456788888889999999999999999999988776544 4445 489999999
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+.++.+.+.+++ .++++|++..|+|||+.+.+ +++|+++|++++ +++|.+++... .+.
T Consensus 135 d~~~~~~~~l~~--------------~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~~-~~~-- 192 (384)
T PRK06434 135 DTDRLNSLDFDP--------------SNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASPY-NQN-- 192 (384)
T ss_pred CCCChhheeecC--------------CCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCcc-cCC--
Confidence 876433333321 16889999999999999866 888888888988 45699975322 121
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcc-ccC-CCcHHHHHHHHHHhcCchhHH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMS-SFT-LISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~-~~~-~~s~~~q~~~~~~l~~~~~~~ 329 (442)
++ .. +-.+++.|.+|.++-+| .=.|.+++.++.+.+.++... ..+ ..++...+.+..-|+.
T Consensus 193 -pl-~~---------gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t----- 256 (384)
T PRK06434 193 -PL-DL---------GADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKT----- 256 (384)
T ss_pred -ch-hc---------CCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc-----
Confidence 22 12 22377899999996434 446777776666655554332 232 2344443433444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
+..+.++-.++...+.+.|+++
T Consensus 257 --L~~R~~r~~~~a~~~a~~L~~~ 278 (384)
T PRK06434 257 --LGLRMEKHNKNGMELARFLRDS 278 (384)
T ss_pred --HHHHHHHHHHHHHHHHHHHHcC
Confidence 2333444456667777778765
No 287
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.71 E-value=3.1e-14 Score=141.76 Aligned_cols=312 Identities=14% Similarity=0.104 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHHHhCCCCccC-CCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCc--------
Q 046900 99 SFRQAMASFMEQIRGGRAKFD-LNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGI-------- 167 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~-~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~-------- 167 (442)
+....+|+.+.+... -. .+.|+++++++++++.+++... .....|+...-+|.+....+....+.
T Consensus 85 ~~~~~lae~L~~~~p----~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~ 160 (445)
T PRK08593 85 EPLVRLAKKLCELAP----GDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKY 160 (445)
T ss_pred HHHHHHHHHHHHhCC----CCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCC
Confidence 445556666654321 11 2579999999999999887532 12346777777777654322101121
Q ss_pred -----EEEEEecCCCCC--Cc-CCH-------HHHHHHHHHHHhcCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHh
Q 046900 168 -----KIVPIHCDSSNN--FQ-ITP-------QALEAAYKEAESKDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATR 231 (442)
Q Consensus 168 -----~v~~v~~~~~~~--~~-~d~-------~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~ 231 (442)
.+..+|...... +. .+. +.+++.+.+.. ...++.+|++....+..|.+ .+.+-+++|.++|++
T Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~ 239 (445)
T PRK08593 161 GPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGYFEALYKFCRE 239 (445)
T ss_pred CCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 122233221100 00 111 33333332210 12356666666556777876 677789999999999
Q ss_pred cCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--cccCC
Q 046900 232 KNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSFTL 309 (442)
Q Consensus 232 ~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~~~ 309 (442)
||+++|.||++..+...+..+ ....+.- .++ +.+++|.+| .|+++|++++ ++.+.+.+... ...+.
T Consensus 240 ~g~llI~DEv~tg~GrtG~~~-a~~~~gv-----~pD----i~t~gK~l~-~G~p~gav~~-~~~i~~~~~~~~~~~T~~ 307 (445)
T PRK08593 240 HGILFAVDDIQQGLGRTGKWS-SISHFNI-----TPD----LMSFGKSLA-GGMPMSAIVG-RKEIMESLEAPAHLFTTG 307 (445)
T ss_pred cCCEEEEechhhCCCcCchHH-HHHhcCC-----CCC----Eeeeccccc-CCcccEEEEE-cHHHHhhhccCCCCCCCC
Confidence 999999999998764444211 1111110 122 347899998 8899999999 56666665421 12244
Q ss_pred CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCCcc--cccChhhHH
Q 046900 310 ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSPLL--EEQTREGEL 383 (442)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~ 383 (442)
.++++.+++.+.|+... + ....++.++.-+++.+.|++ +.+......-|+++.+.+.... .........
T Consensus 308 ~~pl~~aaa~a~l~~l~---~--~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~ 382 (445)
T PRK08593 308 ANPVSCAAALATIDMIE---D--ESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAAL 382 (445)
T ss_pred CCHHHHHHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHH
Confidence 56777776666665321 1 11223333333344444433 3332223345556666653211 111112356
Q ss_pred HHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 384 ALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 384 ~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.++..++++ ||.+.+. ....+|++.+ .+++++++++++++.+++.+...
T Consensus 383 ~~~~~~~~~-Gv~~~~~------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 383 KICNYCFEH-GVVIIAV------AGNVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred HHHHHHHHC-CeEEecc------CCCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 778888776 9998763 1246898876 45999999999999999987654
No 288
>PLN02271 serine hydroxymethyltransferase
Probab=99.71 E-value=3.4e-14 Score=139.97 Aligned_cols=305 Identities=14% Similarity=0.095 Sum_probs=192.0
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCccCC----CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH-----
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDL----NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL----- 161 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~----~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----- 161 (442)
|+......++.....+...+.++ ++. -||-.- +++.|+..++.+|++|||+|+..+..|.++....
T Consensus 186 y~G~~~iD~iE~la~era~~lF~----~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~ 260 (586)
T PLN02271 186 YTGNQYIDQIERLCCERALAAFG----LDSEKWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPG 260 (586)
T ss_pred CCCChhHHHHHHHHHHHHHHHhC----Ccccccccceeec-cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhccccccc
Confidence 44444455666555666666655 333 466666 5567888888999999999999888777654321
Q ss_pred ----hhhcC--cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcE
Q 046900 162 ----RWRTG--IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIH 235 (442)
Q Consensus 162 ----~~~~G--~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~ 235 (442)
. ..| +++++++++++ ...+|.+++++.... .++|+|++..-.|| ..++ ++++.++|+++|++
T Consensus 261 g~~vs-~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~-----~rPKLII~g~Sayp--r~~D---~~~i~eIAdevGA~ 328 (586)
T PLN02271 261 GKKVS-GASIFFESLPYKVNPQ-TGYIDYDKLEEKALD-----FRPKILICGGSSYP--REWD---YARFRQIADKCGAV 328 (586)
T ss_pred ccccc-cccceEEEEEcccccc-cCccCHHHHHHHhhh-----cCCeEEEECchhcc--CcCC---HHHHHHHHHHcCCE
Confidence 2 245 34555556543 345899999995544 28898887655677 4455 66778888899999
Q ss_pred EEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCH-------------------H
Q 046900 236 LVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYND-------------------K 296 (442)
Q Consensus 236 vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~-------------------~ 296 (442)
+++|.++......+..+.+... .--++.+|.+|++ .|-|.|.|+..+. .
T Consensus 329 LmvD~AH~aGLIa~g~~~sP~~----------~aDvvt~TTHKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d 396 (586)
T PLN02271 329 LMCDMAHISGLVAAKECVNPFD----------YCDIVTSTTHKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYD 396 (586)
T ss_pred EEEECcccccccccCcCCCCCc----------CCcEEEeCCcccC--CCCCceEEEecccccccccCCccccccccccHH
Confidence 9999999865544332222111 1226789999987 5667799888432 2
Q ss_pred HHHHHHHccccC-CCcHHH--HHHHHHHhc---CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-CceEEEEEe
Q 046900 297 VVTTARRMSSFT-LISSQT--QYLLASMLS---NKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKG-NAGLFCWMN 369 (442)
Q Consensus 297 ~~~~~~~~~~~~-~~s~~~--q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~ 369 (442)
+.+.+.....++ ..++.. .++.+..+. ..+ .++..++..++.+.|.+.|.+.|+++... ..+..+|++
T Consensus 397 ~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~e-----fk~Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvD 471 (586)
T PLN02271 397 FEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPE-----YKAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWD 471 (586)
T ss_pred HHHHhhcccCCccccChhHHHHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeec
Confidence 333343322221 122221 222222232 222 25667778889999999999999998652 334567888
Q ss_pred cCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC---CCCCEEEEEeec-----CCHHHHHHHHHHHHHHHH
Q 046900 370 LSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC---SEPGWFRVCFAN-----MSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 370 ~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~---~~~~~iRls~~~-----~~~e~i~~~l~~l~~~l~ 435 (442)
+..... ....+++++++.||.+.--..++. ..++.|||+... +.++++++..+.|.++++
T Consensus 472 l~~~g~------~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 472 LTTLGL------TGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CcccCC------CHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 865311 234566777888998853322211 124569998753 356788887777777765
No 289
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.71 E-value=2.4e-14 Score=142.59 Aligned_cols=349 Identities=12% Similarity=0.098 Sum_probs=200.5
Q ss_pred CCCCceeeeecc--cccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 45 TNPSGVIQMGLA--ENQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 45 ~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
.....+||+..+ ...+ .++.+.+.+.+...... ....| -..+.+..+|+.+.+... -..
T Consensus 79 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~---------~~~~~----~~~~~~~~lae~L~~~~p----~~~ 141 (459)
T PRK11522 79 TQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQP---------LHSQE----LLDPLRAMLAKTLAALTP----GKL 141 (459)
T ss_pred CCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCc---------ccccc----cCCHHHHHHHHHHHHhCC----CCC
Confidence 345667887655 3333 23555555554432110 01111 123555566666654321 123
Q ss_pred CcEEEecChHHHHHHHHHhhcC----CC-CeEEEcCCCCcChHHhHhhhcCcEEEE---EecCCC---CCCcCCHHHHHH
Q 046900 121 NRIVVTAGATAANELLTFILAD----PG-DALLVPTPYYPGFDRDLRWRTGIKIVP---IHCDSS---NNFQITPQALEA 189 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~----~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~---v~~~~~---~~~~~d~~~l~~ 189 (442)
+.+++++++++|++.+++.... +| ..|+...-+|.+....+....|-.... .|..+. -.| .|.+.+++
T Consensus 142 ~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~ 220 (459)
T PRK11522 142 KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-GNIEAMRT 220 (459)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-CCHHHHHH
Confidence 5899999999999998875421 22 368888888877654332112211111 111100 001 16788888
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCC
Q 046900 190 AYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSE 268 (442)
Q Consensus 190 ~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~ 268 (442)
.+++....+.++.++++..-....|.+. |.+-++++.++|++||+++|.||++..+...|..+ ......- .++
T Consensus 221 ~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~-a~e~~gv-----~PD 294 (459)
T PRK11522 221 ALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF-ACEHENV-----QPD 294 (459)
T ss_pred HHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh-hhhccCC-----CCC
Confidence 8865432234555555554466678765 55669999999999999999999997653333211 1111110 122
Q ss_pred cEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH----ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 046900 269 RVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR----MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRY 343 (442)
Q Consensus 269 ~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 343 (442)
+-+|+|.+| .| +.+|.+++ .+.+.+.+.. ..+.+..++++.+++.+.|+..+ + ....++.++.-
T Consensus 295 ----ivt~gK~lg-gG~~Pigav~~-~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~---~--~~l~~~~~~~g 363 (459)
T PRK11522 295 ----ILCLAKALG-GGVMPIGATIA-TEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLL---E--QNLPAQAEQKG 363 (459)
T ss_pred ----EEEechhhh-CCCccceeEEE-cHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHh---c--chHHHHHHHHH
Confidence 237899998 78 68999998 4555555421 12224446776666666655321 1 12233444444
Q ss_pred HHHHHHHHhC--CCe---eecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-c
Q 046900 344 QMIIEGLRSA--GIE---CLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-N 417 (442)
Q Consensus 344 ~~l~~~L~~~--g~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~ 417 (442)
+++.+.|+++ ... .....-|+++.+.+... +....++..|+++ ||.+.+.. .....+|+..+ .
T Consensus 364 ~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~------~~~~~i~~~l~~~-Gvl~~~~~----~~~~~lr~~Ppl~ 432 (459)
T PRK11522 364 DYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN------EIGYNFASEMFRQ-RVLVAGTL----NNAKTIRIEPPLT 432 (459)
T ss_pred HHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc------hHHHHHHHHHHHC-CeEEEecC----CCCCEEEEECCcc
Confidence 4555555443 111 11123466777777542 1245778888776 99997632 12467999886 4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh
Q 046900 418 MSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 418 ~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
++++++++++++|.+++.+..+
T Consensus 433 ~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 433 LTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 5999999999999999987654
No 290
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.70 E-value=1e-14 Score=140.61 Aligned_cols=285 Identities=15% Similarity=0.166 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHHhCCCCcc-CCCcEEEecC-hHHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEEEec
Q 046900 99 SFRQAMASFMEQIRGGRAKF-DLNRIVVTAG-ATAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~-~~~~i~~t~G-~~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~v~~ 174 (442)
++-+.+.+.+.+.++ . +..+|++++| +|.+++.++..++.+||++++..-+..+ +.+.++ +.|+ +..+..
T Consensus 37 ~~~~~~~~~l~~l~~----~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~-~~g~-~~~~~~ 110 (349)
T TIGR01364 37 AVANEAESDLRELLN----IPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAK-KYGV-VNVVAS 110 (349)
T ss_pred HHHHHHHHHHHHHhC----CCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHH-HhCC-cEEEec
Confidence 444444455554443 3 2346888877 9999999999999999999887766544 345566 4888 777665
Q ss_pred CCCCCC--cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 175 DSSNNF--QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 175 ~~~~~~--~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
++..+| .+|++.++. ..++++|.++...|.||+..+ ++++.+++++++|.+.+- +. ..
T Consensus 111 ~~~~~~~~~~~~~~~~~--------~~~~~~v~~th~ETstGv~~~--------~l~~~~~~l~iVDavss~---g~-~~ 170 (349)
T TIGR01364 111 GKEGNYTKIPDPSTWEI--------SEDAAYVHYCANETIHGVEFR--------ELPDVKNAPLVADMSSNI---LS-RP 170 (349)
T ss_pred cccCCCCCCCCHHhcCC--------CCCCCEEEEcCCCCcccEecc--------eecccCCCeEEEEccccc---cC-cc
Confidence 432222 244554442 137889999999999999875 455578999999999873 33 23
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--------------ccccCCCcHHHHHHH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--------------MSSFTLISSQTQYLL 318 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--------------~~~~~~~s~~~q~~~ 318 (442)
..+.++ + +++.|..|.+|.|| +|+++++++.+ +.+.. ...+++.+.....++
T Consensus 171 id~~~~---------d--~~~~ssqK~lgP~G--lg~l~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al 236 (349)
T TIGR01364 171 IDVSKF---------G--LIYAGAQKNIGPAG--LTVVIVRKDLL-GRASRITPSMLNYKIHAENDSMYNTPPTFAIYVS 236 (349)
T ss_pred CCHHHc---------c--EEEEecccccCCCc--eEEEEECHHHH-hhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHH
Confidence 333322 3 67889999999777 68888854433 22211 111233344444444
Q ss_pred HHHhcCchhHHH--HHHHHHHHHHHHHHHHHHHHHhC-CCeeec--C--CceEEEEEecCCcccccChhhHHHHHHHHHH
Q 046900 319 ASMLSNKKFTEN--YIKTNRERLQKRYQMIIEGLRSA-GIECLK--G--NAGLFCWMNLSPLLEEQTREGELALWDSMLH 391 (442)
Q Consensus 319 ~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 391 (442)
.++|+ ++.+ -++.+.++.++..+++.+.|++. |+.... + ..+..+.+.++.. ....++...+.+
T Consensus 237 ~~al~---~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~------~~~~~~~~~~~~ 307 (349)
T TIGR01364 237 GLVFK---WLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE------ELEKRFLKEAEE 307 (349)
T ss_pred HHHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh------hHhHHHHHHHHH
Confidence 44444 3333 26778888889999999999988 553331 1 2323455555542 012455455545
Q ss_pred cCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 392 EVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 392 ~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+ |+.+.+|.. ..+.+|+|+. ..+.|+++.+++.|+++++++
T Consensus 308 ~-Gi~~~~~~~----~~g~vRvS~~~~nt~edid~l~~al~~~~~~~ 349 (349)
T TIGR01364 308 R-GLVSLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFQKKH 349 (349)
T ss_pred C-CCcccCCcc----ccCeeEEECcCCCCHHHHHHHHHHHHHHHHhC
Confidence 5 998777754 2368999986 237999999999999987653
No 291
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.70 E-value=7.2e-15 Score=141.08 Aligned_cols=338 Identities=16% Similarity=0.164 Sum_probs=183.9
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC----cEE
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN----RIV 124 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~----~i~ 124 (442)
.-|+|-..||..++ .+.+.+....... +.+| +.....|+...-..++.+...+...+.++ ++++ +|-
T Consensus 21 ~~l~LiaSEN~~Sp-~v~~al~S~l~nk-yaeg---~pg~ryy~G~~~id~iE~la~~ra~~lF~----~~~~~w~anvq 91 (399)
T PF00464_consen 21 STLNLIASENYMSP-AVREALGSDLTNK-YAEG---YPGKRYYGGCEYIDEIEELAIERAKELFG----AEPKEWYANVQ 91 (399)
T ss_dssp HSEE-CTT-----H-HHHHHHTSGGGGS--TTE---ETTEESSSSTHHHHHHHHHHHHHHHHHHT-----STTTEEEE--
T ss_pred cCccccCcccccCH-HHHHHhCCcceee-cccc---CCCcccccCcchhhHHHHHHHHHHHHHhC----CCcccceEEee
Confidence 34788888887754 3333333221100 0011 11112344444455666666677777766 4533 344
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh-----H-----hhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHH
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRD-----L-----RWRTGIKIVPIHCDSSNNFQITPQALEAAYKEA 194 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~-----~-----~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~ 194 (442)
.- +++.|+..++.+|++|||+|+..++...++... . . ....++++++++++ ...+|.|++++.++++
T Consensus 92 p~-SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~-~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~ 168 (399)
T PF00464_consen 92 PH-SGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISAS-GLYFESVPYPVDPD-TGLIDYDELEKLAKEH 168 (399)
T ss_dssp -S-SHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHH-HHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH
T ss_pred cC-CchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccc-cceEEEEeeeeecC-CCeECHHHHHHHHhhc
Confidence 44 456788999999999999999988877654321 1 1 13468889998854 4689999999999886
Q ss_pred HhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEe
Q 046900 195 ESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVY 274 (442)
Q Consensus 195 ~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~ 274 (442)
++|+|++..-++|- .-+.+++.++|.+.|.+++.|-+|......+..+.+.... . -++.+
T Consensus 169 -----kPklIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-A---------Dvvt~ 228 (399)
T PF00464_consen 169 -----KPKLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-A---------DVVTG 228 (399)
T ss_dssp -------SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-S---------SEEEE
T ss_pred -----CCCEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-c---------eEEEe
Confidence 88887775333332 1237888888989999999999986422223233332222 1 27789
Q ss_pred cCcccCCCCCceeEEEeec-------------CHHHHHHHHHccccCCCc-HHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q 046900 275 SLSKDLGLPGFRVGTIYSY-------------NDKVVTTARRMSSFTLIS-SQTQYLLASMLSNKKFTENYIKTNRERLQ 340 (442)
Q Consensus 275 S~SK~~g~~G~RiG~i~~~-------------~~~~~~~~~~~~~~~~~s-~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 340 (442)
|.+|+| +|-|.|.|++. ++.+.+.+.+...++..+ +....+++.++.-.+......++..++..
T Consensus 229 sThKtl--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv 306 (399)
T PF00464_consen 229 STHKTL--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVV 306 (399)
T ss_dssp ESSGGG---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred eccccc--cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHH
Confidence 999998 88999999995 377888877655443222 22211111111111111222356777888
Q ss_pred HHHHHHHHHHHhCCCeeec-CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEe----CCCCCCCCCCCEEEEEe
Q 046900 341 KRYQMIIEGLRSAGIECLK-GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNIS----PGSSCHCSEPGWFRVCF 415 (442)
Q Consensus 341 ~~~~~l~~~L~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~----pg~~f~~~~~~~iRls~ 415 (442)
++.+.|.+.|.+.|+++.. ...+..+|+++..... ....+...+++.||.+. |+.. .+..+..+||+.
T Consensus 307 ~NAk~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~------~g~~a~~~Le~~gI~vnkn~iP~d~-~~~~~sGlRlGT 379 (399)
T PF00464_consen 307 KNAKALAEALQERGFKVVTGGTDNHQVLVDLRSFGI------DGKEAEKALEEAGIIVNKNTIPGDR-SPFVPSGLRLGT 379 (399)
T ss_dssp HHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-------HHHHHHHHHHTTEE-EEE--TTTS-TTTT-SEEEEES
T ss_pred HHHHHHHHHHhhCCcEEEECCCCCCeEEEEeccccc------chHHHHHHHHhcCeeecccccCCCC-CCCCCCEEEECC
Confidence 8999999999999999874 3334577888865211 22335566678899986 4331 111235699997
Q ss_pred ec-----CCHHHHHHHH
Q 046900 416 AN-----MSEQTLEVAL 427 (442)
Q Consensus 416 ~~-----~~~e~i~~~l 427 (442)
.. +.++++++.-
T Consensus 380 ~~lT~rG~~e~dm~~iA 396 (399)
T PF00464_consen 380 PALTRRGMKEEDMKEIA 396 (399)
T ss_dssp HHHHHTT--HHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHH
Confidence 53 3455555543
No 292
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.69 E-value=3.5e-14 Score=140.47 Aligned_cols=346 Identities=11% Similarity=0.070 Sum_probs=195.2
Q ss_pred CCCCCceeeeecc--cccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLA--ENQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+||+..+ ...+ +++.+.+.+.++.... .....|. ..+.+..+|+.+.+... -.
T Consensus 71 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l---------~~~~~~~----~~~~~~~lAe~L~~~~p----~~ 133 (442)
T TIGR03372 71 DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQ---------PLHSQEL----LDPLRALLAKTLAALTP----GK 133 (442)
T ss_pred ECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhC---------CCccccc----CCHHHHHHHHHHHHhCC----CC
Confidence 3445677888655 3333 3355555555443211 0011121 13445556666654321 12
Q ss_pred CCcEEEecChHHHHHHHHHhhcC-----CCCeEEEcCCCCcChHHhHhhhcCcEEE---EEecCCCCC--CcCCHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILAD-----PGDALLVPTPYYPGFDRDLRWRTGIKIV---PIHCDSSNN--FQITPQALEA 189 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~-----~gd~Vl~~~p~y~~~~~~~~~~~G~~v~---~v~~~~~~~--~~~d~~~l~~ 189 (442)
.+.+++++++++|++.+++.... ....|+...-+|.+....+....|-... ..|+.+.-. --.|.+.+++
T Consensus 134 ~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~ 213 (442)
T TIGR03372 134 LKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLK 213 (442)
T ss_pred cCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHH
Confidence 25799999999999998875422 2357888888887765433211221100 111110000 0025677877
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCC
Q 046900 190 AYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSE 268 (442)
Q Consensus 190 ~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~ 268 (442)
.+++....+.++.++++..-....|... +.+-++++.++|++||+++|.||++..+...|. ........- .++
T Consensus 214 ~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~-~~a~e~~gv-----~PD 287 (442)
T TIGR03372 214 ALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGK-MFACEHEGV-----QPD 287 (442)
T ss_pred HHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcccc-chhhhhcCC-----CCC
Confidence 7764322334565656554456667765 566699999999999999999999976543343 111111111 122
Q ss_pred cEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH----ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 046900 269 RVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR----MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRY 343 (442)
Q Consensus 269 ~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 343 (442)
+-+|+|.+| .| +.+|.+++ .+.+.+.+.. +.+.+..++++.+++.+.|+-.+ ++ ...+..++.-
T Consensus 288 ----ivt~gK~lg-~G~~Pigavv~-~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~--~~---~l~~~~~~~G 356 (442)
T TIGR03372 288 ----ILCLAKALG-GGVMPIGATIA-TEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELL--EK---NLPAQAAIKG 356 (442)
T ss_pred ----eeeehhhhc-CCcccceEEEe-cHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHH--hc---cHHHHHHHHH
Confidence 235899998 78 68999998 4666665531 12234456777776666665211 11 1122233333
Q ss_pred HHHHHHHHh----CC-CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-c
Q 046900 344 QMIIEGLRS----AG-IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-N 417 (442)
Q Consensus 344 ~~l~~~L~~----~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~ 417 (442)
+++.+.|++ +. .-.....-|+++.+++... .....++..|+++ ||++.+... ....+|+... .
T Consensus 357 ~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~------~~~~~i~~~l~~~-Gvl~~~~~~----~~~~lr~~Ppl~ 425 (442)
T TIGR03372 357 DFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN------EIGYAFAKELFQQ-NILVAGTLN----NAKSIRIEPPLT 425 (442)
T ss_pred HHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh------HHHHHHHHHHHHC-CcEEeecCC----CCCEEEEECCcc
Confidence 344444433 22 1111124567888887542 1246788888776 999975311 2357999886 4
Q ss_pred CCHHHHHHHHHHHHHHH
Q 046900 418 MSEQTLEVALKRIHNFM 434 (442)
Q Consensus 418 ~~~e~i~~~l~~l~~~l 434 (442)
++++++++++++|.+.+
T Consensus 426 ~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 426 ITIEQCALVIKAAKDAL 442 (442)
T ss_pred cCHHHHHHHHHHHHHhC
Confidence 59999999999998763
No 293
>PLN03032 serine decarboxylase; Provisional
Probab=99.69 E-value=2.8e-14 Score=137.68 Aligned_cols=287 Identities=13% Similarity=0.092 Sum_probs=188.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcE--EEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRI--VVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i--~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~ 171 (442)
...++.+.+.+++.+.+| ++++++ ++|+|+|+++..++.+.. .++..|+++.-.|..+..+++. +|.++..
T Consensus 63 ~a~~~e~~v~~~ia~llg----~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~-lg~~~~~ 137 (374)
T PLN03032 63 HSRQFEVGVLDWFARLWE----LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARM-YRMEAVK 137 (374)
T ss_pred cHHHHHHHHHHHHHHHhC----CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHH-cCCCCeE
Confidence 447788888888887766 567776 999999999988776543 2456888999999999999885 8998889
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcC-----cEEEEeccCCcCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN-----IHLVSDEIYSGSA 246 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~-----~~vi~De~y~~~~ 246 (442)
||.+.+ ..+|+++|++.+++. ..++.+++++..+|+||.+-+ +++|+++|++++ +++.+|.+|+.+.
T Consensus 138 V~~d~~--g~id~~~L~~~i~~~---~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~ 209 (374)
T PLN03032 138 VPTLPS--GEIDYDDLERALAKN---RDKPAILNVNIGTTVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLM 209 (374)
T ss_pred eeeCCC--CcCcHHHHHHHHHHc---CCCCEEEEEEecCcCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhh
Confidence 998764 469999999999752 124667777788999999977 777788888886 5899999997532
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc-------CCCc-----HHH
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF-------TLIS-----SQT 314 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~-------~~~s-----~~~ 314 (442)
..-....+...+. .+-.-+.-|.+|.+| ....+|.++..++.+ ..+.....+ ...| .+.
T Consensus 210 ~p~~~~~~~~~~~-------~~vDSis~s~HK~~g-~P~g~G~ll~r~~~~-~~~~~~~~Yl~~~d~ti~gSR~g~~~l~ 280 (374)
T PLN03032 210 MPFVSRAPEVTFR-------KPIGSVSVSGHKFLG-CPMPCGVALTRKKHV-KALSQNVEYLNSRDATIMGSRNGHAPLY 280 (374)
T ss_pred hhccCCCcccCCC-------cCCcEEEECcccccC-CCcCeEEEEEEchhh-HhhccCCcccCCCCCcccCCCchHHHHH
Confidence 2100000000010 012234569999887 446689999865443 333221111 1112 223
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeee-cCCceEEEEEecCCcccccChhhHHHHHHHHHHcC
Q 046900 315 QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECL-KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEV 393 (442)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 393 (442)
.++....+. .+-++++.+...+..+++.+.|++.++++. .|... .+.+..+. ... + .+
T Consensus 281 ~w~~l~~~G-----~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~-~V~f~~~~---------~~~----~-~~- 339 (374)
T PLN03032 281 LWYTLRRKG-----YRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSS-TVVFERPM---------DEA----F-IK- 339 (374)
T ss_pred HHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCCce-EEEEcCCC---------cHh----H-hh-
Confidence 333333232 233566777778888899999988888764 45544 45444442 111 2 23
Q ss_pred cEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHH
Q 046900 394 KLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHN 432 (442)
Q Consensus 394 gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~ 432 (442)
|..+.+- +.++|+++. ..+.+.++++++.|++
T Consensus 340 ~w~l~~~-------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 340 KWQLACE-------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred eeeeccc-------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 6666541 247999886 3477888888888765
No 294
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.69 E-value=2.6e-14 Score=140.77 Aligned_cols=311 Identities=12% Similarity=0.082 Sum_probs=198.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCccC-C-CcEEE--ecChHHHHHHHHHhhc--------CCC-----CeEEEcCCCCcChHH
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFD-L-NRIVV--TAGATAANELLTFILA--------DPG-----DALLVPTPYYPGFDR 159 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~-~-~~i~~--t~G~~~ai~~~~~~l~--------~~g-----d~Vl~~~p~y~~~~~ 159 (442)
..++.+.+.+++.+.+| ++ + +++.. |+|+|+++..++.+.. ..| ..|+++.-.|..+..
T Consensus 78 ~~~le~~~~~~la~llg----~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~k 153 (431)
T TIGR01788 78 TAEIENRCVNMLADLWH----APAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEK 153 (431)
T ss_pred HHHHHHHHHHHHHHHhC----CCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHH
Confidence 35788888888888766 44 2 45544 8999999998875542 111 368889999999999
Q ss_pred hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc------C
Q 046900 160 DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK------N 233 (442)
Q Consensus 160 ~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~------~ 233 (442)
+++. .|+++..+|.++ +++.+|++.|++++.+ ++.+|+++..+|.||.+.| +++|+++|+++ +
T Consensus 154 a~~~-lg~~v~~i~~d~-~~~~vd~~~L~~~i~~------~t~lV~~t~g~t~tG~idp---i~~I~~i~~~~~~~~~~~ 222 (431)
T TIGR01788 154 FARY-FDVELREVPMDP-GRYVIDPEQVVEAVDE------NTIGVVCILGTTYTGEYED---VKALNDALDEYNAKTGWD 222 (431)
T ss_pred HHHH-cCceeEEEecCC-CceeeCHHHHHHHHhh------CCeEEEEEeCCCCCcccCC---HHHHHHHHHHHHhhhCCC
Confidence 9885 899999999986 4467999999999976 7788888999999999998 77778888899 9
Q ss_pred cEEEEeccCCcCCC---CCCCcccHHHHHhhhcCCCCCcEEEEecCcccC-CCCCceeEEEeecCHH-HHHHHHHcccc-
Q 046900 234 IHLVSDEIYSGSAF---SSSEFVSIAEILEARQYKDSERVHIVYSLSKDL-GLPGFRVGTIYSYNDK-VVTTARRMSSF- 307 (442)
Q Consensus 234 ~~vi~De~y~~~~~---~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~G~RiG~i~~~~~~-~~~~~~~~~~~- 307 (442)
+++.+|.+|+.+.. .+..... +. ...---+.-|.+|.+ +..| +|.++..++. +...+.....+
T Consensus 223 ~~~HvDaaq~g~~~p~~~~~~~~~---~~------~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~~~~~~~yl 291 (431)
T TIGR01788 223 IPIHVDAASGGFIAPFVYPDLEWD---FR------LPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFHVNYL 291 (431)
T ss_pred ceEEEecccHHHHHHHhCCCchhh---cC------CCCceEEEECchhccCCCCC--cEEEEEeChHHcchhheeccccc
Confidence 99999999995331 1111111 10 012223567999975 5444 7988885543 22222111001
Q ss_pred --------CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC--CceEEEEEecCCcccc
Q 046900 308 --------TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKG--NAGLFCWMNLSPLLEE 376 (442)
Q Consensus 308 --------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~g~~~~~~~~~~~~~ 376 (442)
...+...-.++..++.-..+...-+.+..++..+..+++.+.|++. ++++..+ ..+ .+.+++.....
T Consensus 292 ~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~-iV~Fr~~~~~~- 369 (431)
T TIGR01788 292 GGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIP-LVAFKLKDDAD- 369 (431)
T ss_pred CCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCce-EEEEEeCCCCC-
Confidence 0112111112222221000112335666777788888999999887 5887754 455 44445543110
Q ss_pred cChhhHHHHHHHHHHcCcEEEeCCCCCC-CCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 377 QTREGELALWDSMLHEVKLNISPGSSCH-CSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 377 ~~~~~~~~l~~~l~~~~gi~v~pg~~f~-~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.. .+..++.+.|.++ |+.+.....-. ..+..++|+++. ..+++.++.+++.|++++..+
T Consensus 370 ~~-~~~~~l~~~L~~~-G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 370 PG-YTLYDLSHRLRER-GWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CC-cCHHHHHHHHHHC-CCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 00 1246777877665 98754322100 122346899885 347889999999999988754
No 295
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.68 E-value=7e-15 Score=142.76 Aligned_cols=280 Identities=14% Similarity=0.202 Sum_probs=175.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCcc-CCCcEEEecC-hHHHHHHHHHhhcC---CCCeEEEcCCCCcChHHhHhhhcCcEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKF-DLNRIVVTAG-ATAANELLTFILAD---PGDALLVPTPYYPGFDRDLRWRTGIKIVP 171 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~-~~~~i~~t~G-~~~ai~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~ 171 (442)
+.+.|+.++++++ + ++++|++|+| +|++++.++..|+. +||.|++ .|....+...++ ..|+++..
T Consensus 46 ~~~~r~~l~~l~~--------~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~-g~~~~~~~~~a~-~~g~~~~~ 115 (355)
T cd00611 46 VNEAESDLRELLN--------IPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVT-GAWSAKAAKEAK-RYGGVVVI 115 (355)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEEC-CHHHHHHHHHHH-hcCCCcEE
Confidence 4677777777775 3 4678999988 99999999999987 4555544 222222223556 48999998
Q ss_pred EecCCCCCCcCC-HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 172 IHCDSSNNFQIT-PQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 172 v~~~~~~~~~~d-~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
++.++++++. + ++..+..+. +++++|.++..+|.||..++ ++++.+|+++++|.+.+- +.
T Consensus 116 ~~~~~~g~~~-~~~~~~~~~~~------~~~~lV~~~h~~t~tG~~~~--------~i~~~~g~~~~VDa~qs~---g~- 176 (355)
T cd00611 116 VAAKEEGKYT-KIPDVETWDLA------PDAAYVHYCSNETIHGVEFD--------EVPDTGGVPLVADMSSNI---LS- 176 (355)
T ss_pred EecccccCCC-CCCCHhhcCCC------CCCCEEEEeCCcccccEEcc--------eecccCCCeEEEEccccc---cC-
Confidence 8876543331 2 222222222 37899999999999999743 344468999999999884 22
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--------------cccCCCcHHHHH
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--------------SSFTLISSQTQY 316 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--------------~~~~~~s~~~q~ 316 (442)
....+.++ + +.+.|..|.+|.+| +|+++++++.+ +.+... ..+++.+.....
T Consensus 177 ~~idv~~~---------~--~~~ss~~K~lGP~G--~g~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~ 242 (355)
T cd00611 177 RPIDVSKF---------G--VIYAGAQKNLGPAG--VTVVIVRKDLL-GKARKITPSMLNYKTHADNNSLYNTPPTFAIY 242 (355)
T ss_pred CCCCHHHh---------C--EEEeecccccCCCc--eEEEEECHHHH-hhcccCCCCcccHHHHHhcCCCCCCChHHHHH
Confidence 23344332 2 35567899999777 68888844333 222110 012333333444
Q ss_pred HHHHHhcCchhHHHH--HHHHHHHHHHHHHHHHHHHHhC-CCe-ee-c--CCceEEEEEecCCcccccChhhHHHHHHHH
Q 046900 317 LLASMLSNKKFTENY--IKTNRERLQKRYQMIIEGLRSA-GIE-CL-K--GNAGLFCWMNLSPLLEEQTREGELALWDSM 389 (442)
Q Consensus 317 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~--~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l 389 (442)
++.+.++ ++.+. ++...++.++..+++.+.|++. |+. .. . ...+..+.+.++.. ....++...+
T Consensus 243 ~L~aal~---~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~------~l~~~~~~~~ 313 (355)
T cd00611 243 MMGLVLK---WLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKE------ELEKEFLKEA 313 (355)
T ss_pred HHHHHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCCh------hhhHHHHHHH
Confidence 4444444 33332 6777888889999999999988 752 21 1 12333455555542 0123333455
Q ss_pred HHcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHH
Q 046900 390 LHEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNF 433 (442)
Q Consensus 390 ~~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~ 433 (442)
.+. |+.+.+|.. ..+.+|+|+.. .+++|++++++.|+++
T Consensus 314 ~r~-G~~~~~~~~----~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 314 EAA-GMIGLKGHR----SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred HHC-CCcccCCCc----ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 455 998666653 23689999862 3899999999999885
No 296
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.68 E-value=1.2e-13 Score=137.67 Aligned_cols=360 Identities=11% Similarity=0.048 Sum_probs=194.7
Q ss_pred CCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCC
Q 046900 41 YEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRA 116 (442)
Q Consensus 41 ~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 116 (442)
|..+.....+||+..+. ..+ .++.+.+.+.+....... ....|.. .+....+|+.+.+...
T Consensus 46 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~--------~~~~~~~----~~~~~~lae~L~~~~p--- 110 (457)
T PRK05639 46 LIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQH--------SMIGYTH----SERAIRVAEKLAEISP--- 110 (457)
T ss_pred EEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccc--------cccCccC----CHHHHHHHHHHHhhCC---
Confidence 33345567788886653 223 335555555544321000 0011211 2444456666654321
Q ss_pred ccCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCc-------------EEEEEecCCCC--C
Q 046900 117 KFDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGI-------------KIVPIHCDSSN--N 179 (442)
Q Consensus 117 ~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~-------------~v~~v~~~~~~--~ 179 (442)
...+.+++++++++|++.+++... .....|+...-+|.+....+....|. .++.+|..... .
T Consensus 111 -~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 189 (457)
T PRK05639 111 -IENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNP 189 (457)
T ss_pred -CCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcccccc
Confidence 223689999999999999887652 23457888888887754322111111 12233322100 0
Q ss_pred Cc----CCHH--------HHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 180 FQ----ITPQ--------ALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 180 ~~----~d~~--------~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
|. -|.+ .+++.+........++.++++..-....|.+. +.+-+++|.++|++|++++|.||++..+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~G 269 (457)
T PRK05639 190 WGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIG 269 (457)
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccC
Confidence 00 0222 23333321111134566666654355567755 56669999999999999999999998754
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-ccccCCCcHHHHHHHHHHhcCc
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-MSSFTLISSQTQYLLASMLSNK 325 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-~~~~~~~s~~~q~~~~~~l~~~ 325 (442)
..|..+. ...+.- ...++ +|+|.+| .|+.+|.+++ ++.+.+.... ....+..++++..++.+.|+..
T Consensus 270 rtG~~~a-~~~~gv------~PDiv---~~gK~l~-gG~pi~av~~-~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l 337 (457)
T PRK05639 270 RTGKWFA-SEWFEV------KPDLI---IFGKGVA-SGMGLSGVIG-RKELMDLTSGSALLTPAANPVISAAAEATLEII 337 (457)
T ss_pred cCchHHH-HHhcCC------CCCEE---Eechhhc-CCCcceeEEe-hHHHHhhcCCCcccCCCcCHHHHHHHHHHHHHH
Confidence 3442111 111111 12222 3899998 7899999999 5566553221 1122345666655555555421
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCC
Q 046900 326 KFTENYIKTNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGS 401 (442)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~ 401 (442)
. + ....+..++.-++|.+.|++ .++......-|+++.+++..............+...++++ |+++.+..
T Consensus 338 ~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~g 411 (457)
T PRK05639 338 E--E---ENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFEL-GLILPSYG 411 (457)
T ss_pred H--H---ccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhC-CeEEeecC
Confidence 1 1 11222233333444444443 3333333455667777663211111112345677778776 99997642
Q ss_pred CCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 402 SCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 402 ~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
.....+|+... .++++++++++++|.+++....
T Consensus 412 ----~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 412 ----MFGNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred ----CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 12467999886 4599999999999999998754
No 297
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.67 E-value=2.6e-14 Score=139.91 Aligned_cols=287 Identities=11% Similarity=0.093 Sum_probs=177.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCcc-CCCcEEEec-ChHHHHHHHHHhhcCC-CCeEEEcCCCCcC-hHHhH-hhhcCc-EEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKF-DLNRIVVTA-GATAANELLTFILADP-GDALLVPTPYYPG-FDRDL-RWRTGI-KIV 170 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~-~~~~i~~t~-G~~~ai~~~~~~l~~~-gd~Vl~~~p~y~~-~~~~~-~~~~G~-~v~ 170 (442)
+.+.|+.++++++ + ++++|+++. ++|.+++.++..|+++ ++.|+. +-.|+. +...+ + +.|+ ++.
T Consensus 50 ~~~~r~~l~~l~~--------~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~-~~g~~~v~ 119 (378)
T PRK03080 50 LKRVIEGTRELLS--------LPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSKWATDVVK-QLKLEDPR 119 (378)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHh-hcCCCCce
Confidence 4566666666664 3 345788886 7999999999999874 444444 334443 22222 4 4788 888
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
.++.+. +..+|+++++ .++.|.+++.+|.||..++ +++|++ +++|+++|+|.+.+- +.
T Consensus 120 ~~~~~~--g~~~d~~~i~-----------~~~~V~~~h~~t~tG~~~p---i~~I~~--~~~g~~~vVDa~qs~---G~- 177 (378)
T PRK03080 120 VLEADY--GSLPDLSAVD-----------FDRDVVFTWNGTTTGVRVP---VARWIG--ADREGLTICDATSAA---FA- 177 (378)
T ss_pred EeccCC--CCCCCHhhcC-----------CCCCEEEEecCCccceecc---chhhcc--ccCCCeEEEeccccc---cc-
Confidence 887654 2346666533 2456888899999999999 556666 678999999999884 22
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCC-CCceeEEEeecCHHHHHHHHHcc------------------------
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGL-PGFRVGTIYSYNDKVVTTARRMS------------------------ 305 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~-~G~RiG~i~~~~~~~~~~~~~~~------------------------ 305 (442)
....+..+ + +++.|..|.++. +| +|+++..+ ...+.+....
T Consensus 178 ~pidv~~i--D---------~~~~s~~K~l~~P~G--~g~l~v~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (378)
T PRK03080 178 LPLDWSKL--D---------VYTFSWQKVLGGEGG--HGMAILSP-RAVERLESYTPARPIPKFFRLTKGGKAIENSFKG 243 (378)
T ss_pred CCCCHHHC--c---------EEEEehhhhCCCCCc--eEEEEECH-HHHHhhhcccCCCCCchhheeccchHHhhhhhcC
Confidence 23344432 2 678899999853 55 79998854 3433332110
Q ss_pred -ccCCCcHHHHHHHHHHhcCchhHHH--HHHHHHHHHHHHHHHHHHHHHhCC-Ceeec--C--CceEEEEEecCCccccc
Q 046900 306 -SFTLISSQTQYLLASMLSNKKFTEN--YIKTNRERLQKRYQMIIEGLRSAG-IECLK--G--NAGLFCWMNLSPLLEEQ 377 (442)
Q Consensus 306 -~~~~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~--~--~~g~~~~~~~~~~~~~~ 377 (442)
.++..+.....++.+.++ ++.+ -++...++.++..+++.+.|++.+ +++.. + .++..+.+.+++.. .
T Consensus 244 ~t~~tp~i~~i~~l~~al~---~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~--~ 318 (378)
T PRK03080 244 QTINTPSMLTVEDYLDQLD---WANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ--A 318 (378)
T ss_pred CcccCchHHHHHHHHHHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCch--H
Confidence 001111122222222332 2222 245667777788888888888875 45442 1 23234555555410 0
Q ss_pred ChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 378 TREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 378 ~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
. ...++...++++ |+.+..|... ...+.+|+|+. ..++++++.+++.|++++++.+.
T Consensus 319 ~--~~~~~~~~l~~~-~i~v~~g~~~--~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 319 A--VDAAAVAKLLRE-NGAVDIEPYR--DAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred H--HHHHHHHHHHHc-CCeecccccc--CCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 0 123466677776 8888876532 13468999986 23899999999999999887653
No 298
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.67 E-value=1e-14 Score=142.06 Aligned_cols=284 Identities=18% Similarity=0.285 Sum_probs=178.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD 175 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~ 175 (442)
..++++++++|++ ...++.+++++.|+.+++.++ +++||.|+++.-+|+....++.. .|++++.++++
T Consensus 27 ~~~fE~~~a~~~g----------~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~-~G~~pv~~Di~ 95 (363)
T PF01041_consen 27 VEEFEKEFAEYFG----------VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILW-AGAEPVFVDID 95 (363)
T ss_dssp HHHHHHHHHHHHT----------SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHH-TT-EEEEE-BE
T ss_pred HHHHHHHHHHHhC----------CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHH-hccEEEEEecc
Confidence 5788888988875 678999999999999999998 57999999999999999999985 99999999998
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCC-CCCCccc
Q 046900 176 SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAF-SSSEFVS 254 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~-~~~~~~s 254 (442)
+ ..+.+|++.+++.+++ ++|+|++++. -|... ++.+|.++|+++|++||+|.+++.... .+..
T Consensus 96 ~-~~~~id~~~~~~~i~~------~t~ai~~~h~---~G~~~---d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~--- 159 (363)
T PF01041_consen 96 P-ETLNIDPEALEKAITP------KTKAILVVHL---FGNPA---DMDAIRAIARKHGIPLIEDAAQAFGARYKGRP--- 159 (363)
T ss_dssp T-TTSSB-HHHHHHHHHT------TEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-TTTTT-EETTEE---
T ss_pred C-CcCCcCHHHHHHHhcc------CccEEEEecC---CCCcc---cHHHHHHHHHHcCCcEEEccccccCceeCCEe---
Confidence 5 4689999999999986 8899988754 44443 488889999999999999999985221 1211
Q ss_pred HHHHHhhhcCCCCCcEEEEecC--cccCCCCCceeEEEeecCHHHHHHHHHccccC-------------------CCcHH
Q 046900 255 IAEILEARQYKDSERVHIVYSL--SKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT-------------------LISSQ 313 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~--SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~-------------------~~s~~ 313 (442)
+.. .+ .+.+.|| +|.+. .| ..|.++++++.+.+.++.+...+ .++.+
T Consensus 160 ~G~---------~g-d~~~fSf~~~K~i~-~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~ 227 (363)
T PF01041_consen 160 VGS---------FG-DIAIFSFHPTKIIT-TG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSEL 227 (363)
T ss_dssp TTS---------SS-SEEEEESSTTSSS--SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHH
T ss_pred ccC---------CC-CceEecCCCCCCCc-CC-CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHH
Confidence 100 12 2456676 68874 33 46999998888887776544321 13333
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec--CCc---eE-EEEEecCCcccccChhhHHHHH
Q 046900 314 TQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK--GNA---GL-FCWMNLSPLLEEQTREGELALW 386 (442)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~---g~-~~~~~~~~~~~~~~~~~~~~l~ 386 (442)
..+.+..-|+. +++..+.-+++.+.+.+.|.+. ++.... +.. .+ .+.+.++.... .+..++.
T Consensus 228 ~AAigl~QL~~-------L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~----~~rd~l~ 296 (363)
T PF01041_consen 228 QAAIGLAQLKR-------LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL----ADRDELV 296 (363)
T ss_dssp HHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC----STHHHHH
T ss_pred HHHHHHHHHHH-------hhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc----chHHHHH
Confidence 33333333332 2333334445566677777765 443322 221 22 22333433110 1256788
Q ss_pred HHHHHcCcEEEeCCCC-C-C------C-----C--CC-------CEEEEEee-cCCHHHHHHHHHHHH
Q 046900 387 DSMLHEVKLNISPGSS-C-H------C-----S--EP-------GWFRVCFA-NMSEQTLEVALKRIH 431 (442)
Q Consensus 387 ~~l~~~~gi~v~pg~~-f-~------~-----~--~~-------~~iRls~~-~~~~e~i~~~l~~l~ 431 (442)
+.|.++ ||.+.+... . . . . -+ ..+.|-+. .+++++++..++.|+
T Consensus 297 ~~L~~~-GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 297 EALRAR-GIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HHHHHT-TBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHHHHC-CCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 888776 999987541 0 0 0 0 00 12444443 458888888887764
No 299
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.66 E-value=6.2e-14 Score=129.19 Aligned_cols=300 Identities=15% Similarity=0.110 Sum_probs=201.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
...|.+.+|++.+ .+..++.+++.-|++..+..|.+ ||=.|.-+.-.+......++. .++.-.-+..
T Consensus 218 hv~LE~eLA~LHq----------K~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrn-s~v~K~IFrH 286 (570)
T KOG1360|consen 218 HVRLEAELADLHQ----------KEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRN-SRVPKHIFRH 286 (570)
T ss_pred hhhHHHHHHHHhc----------CcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhh-cCCcceeecc
Confidence 4688888988865 34455555555555555544422 776677777778888888885 6665433332
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s 254 (442)
-|++.|++.|+...+. .+|+|-+...+..+|.+.| +++|++++.+||.+-++||+++-..|+... ..
T Consensus 287 -------ND~~hL~~lL~~~~~s--vPKivAFEtVhSM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~rG-aG 353 (570)
T KOG1360|consen 287 -------NDLDHLEQLLQSSPKS--VPKIVAFETVHSMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGPRG-AG 353 (570)
T ss_pred -------CCHHHHHHHHHhCCCC--CCceEEEeeeeccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccCCC-CC
Confidence 3789999999875432 5678888899999999999 788899999999999999999876665321 11
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc----CCCcHHHHHHHHHHhcCchhHHH
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF----TLISSQTQYLLASMLSNKKFTEN 330 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~~~~~~~ 330 (442)
+.+.+ ..+...-|+.+++.|+||+-| |||.+ ...+.+.++.+..- ...++.....+....+-..- +
T Consensus 354 vgerd----Gvm~kvDiIsGTLgKafGcVG---GYIAa-t~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~-~- 423 (570)
T KOG1360|consen 354 VGERD----GVMHKVDIISGTLGKAFGCVG---GYIAA-TRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKS-E- 423 (570)
T ss_pred ccccC----Ccchhhhhcccchhhhccccc---ceehh-hhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhh-h-
Confidence 11110 112344577899999999888 99998 67788888875432 22333333333322221110 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC--CC
Q 046900 331 YIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS--EP 408 (442)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~--~~ 408 (442)
.-...|+.-+++-.++.+.|.+.|+.+.+.+.- .+-+.+.+.. -..++++.|+.++||.|-.-. |... +.
T Consensus 424 eg~~lR~~hqrnv~~~kq~l~~~GiPVi~~pSH-IiPv~vgda~------l~~~~sd~Li~~h~iYvQaIN-yPTV~rG~ 495 (570)
T KOG1360|consen 424 EGRVLRRQHQRNVKYVKQLLMELGIPVIPNPSH-IIPVRVGDAA------LAKQASDILISKHNIYVQAIN-YPTVARGT 495 (570)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCcccCCCcc-eeeeeccCHH------HHHHHHHHHHHhcCeEEEecc-CCcccccc
Confidence 113456666777888999999999999876654 5555554432 256788999999999998643 3322 23
Q ss_pred CEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 409 GWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 409 ~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
..+||... ..+.+.++.+++.|..++.+..
T Consensus 496 E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 496 ERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred eeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 45888765 2378888999999998887643
No 300
>PRK07678 aminotransferase; Validated
Probab=99.66 E-value=1.6e-13 Score=136.95 Aligned_cols=314 Identities=11% Similarity=0.092 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC-------CC-CeEEEcCCCCcChHHhHhhhcCc---
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD-------PG-DALLVPTPYYPGFDRDLRWRTGI--- 167 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~~G~--- 167 (442)
+....+|+.+.+..+ ..+.+++++++++|++.+++.... +| ..|+...-+|.+....+....|.
T Consensus 89 ~~~~~lae~l~~~~~-----~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~ 163 (451)
T PRK07678 89 EPAIKLAEKLNEWLG-----GEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQR 163 (451)
T ss_pred HHHHHHHHHHHHhCC-----CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCccc
Confidence 334456666654322 135799999999999988776421 23 57888888887754332211111
Q ss_pred ---------EEEEEecCCCCC--Cc-----CC---HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHH
Q 046900 168 ---------KIVPIHCDSSNN--FQ-----IT---PQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLD 227 (442)
Q Consensus 168 ---------~v~~v~~~~~~~--~~-----~d---~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~ 227 (442)
.+..+|...... |. .| .+.+++.+... ...++.+|++.....-.|.+. +.+-++++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~ 241 (451)
T PRK07678 164 KYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQDYMKAVKE 241 (451)
T ss_pred ccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHH
Confidence 112222111000 10 01 12345555421 123565655554344467664 5666999999
Q ss_pred HHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH---
Q 046900 228 FATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR--- 303 (442)
Q Consensus 228 ~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~--- 303 (442)
+|++||+++|.||++..|...|..+ ....+.- .+| +-+++|.+| .| +.+|.+++ .+++.+.+..
T Consensus 242 lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~gv-----~PD----ivt~gK~lg-gG~~Pi~av~~-~~~i~~~~~~~~~ 309 (451)
T PRK07678 242 ICQKHGALLISDEVICGFGRTGKAF-GFMNYGV-----KPD----IITMAKGIT-SAYLPLSATAV-KKEIYEAFKGKGE 309 (451)
T ss_pred HHHHcCCEEEEeehhhcCCcCchhH-HHHhcCC-----CCC----EEEeecccc-cCCcceeEEEE-cHHHHHHHhccCc
Confidence 9999999999999998765444321 1111111 122 236899998 77 69999999 5666666542
Q ss_pred -----ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHH----HhCCCeeecCCceEEEEEecCCcc
Q 046900 304 -----MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGL----RSAGIECLKGNAGLFCWMNLSPLL 374 (442)
Q Consensus 304 -----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L----~~~g~~~~~~~~g~~~~~~~~~~~ 374 (442)
....+..++++.+++.+.|+... + ....++.++.-+++.+.| .++++......-|+++-+.+....
T Consensus 310 ~~~~~h~~T~~gnp~~~aaa~a~l~~l~---~--~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~ 384 (451)
T PRK07678 310 YEHFRHVNTFGGNPAACALALKNLEIME---N--ENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDK 384 (451)
T ss_pred ccccccCCCCCcCHHHHHHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCC
Confidence 12234556777777666665211 1 012222333333333333 334433323344556666663211
Q ss_pred ccc---ChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 375 EEQ---TREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 375 ~~~---~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
... .......++..++++ ||++.+...........+|++.. .++++++++++++|.+++.++
T Consensus 385 ~~~~~~~~~~a~~i~~~l~~~-Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 385 ETKEPADNDKVASVVAACKEK-GLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred cccCcCchHHHHHHHHHHHHC-CcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 100 112246777788776 99997632111122357999876 458999999999999998764
No 301
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.65 E-value=1e-13 Score=130.93 Aligned_cols=170 Identities=19% Similarity=0.209 Sum_probs=125.0
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
....++++++..|+..++..|+..|++|+.....|.+....++. ..|++...++++ |++.+++++.+
T Consensus 92 a~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~-------~~~~~~~~i~~--- 161 (409)
T KOG0053|consen 92 AAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD-------DLKKILKAIKE--- 161 (409)
T ss_pred CceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh-------hHHHHHHhhcc---
Confidence 55689999999999999999999999999999999887665432 378887777654 46777777765
Q ss_pred cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecC
Q 046900 197 KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSL 276 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~ 276 (442)
++++|++.+|+||+..+.+ +++|.++|++++++||+|+.++... +.....+..+ |+++|.
T Consensus 162 ---~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~-----~~~pL~lGAD---------IV~hSa 221 (409)
T KOG0053|consen 162 ---NTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPY-----NQDPLPLGAD---------IVVHSA 221 (409)
T ss_pred ---CceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccc-----ccChhhcCCC---------EEEEee
Confidence 7999999999999999987 7777888889999999999998542 3334444333 889999
Q ss_pred cccCCC-CCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHH
Q 046900 277 SKDLGL-PGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLA 319 (442)
Q Consensus 277 SK~~g~-~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~ 319 (442)
+|.+|- .-+=.|.++...+.+...++..... +..++.......
T Consensus 222 TKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~ 267 (409)
T KOG0053|consen 222 TKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLS 267 (409)
T ss_pred eeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHh
Confidence 999852 3344566666446665555543332 444554444333
No 302
>PRK12403 putative aminotransferase; Provisional
Probab=99.64 E-value=5.9e-13 Score=133.09 Aligned_cols=309 Identities=13% Similarity=0.103 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc-------CCCCe-EEEcCCCCcChHH-hHhhhcCcE
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA-------DPGDA-LLVPTPYYPGFDR-DLRWRTGIK 168 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~-------~~gd~-Vl~~~p~y~~~~~-~~~~~~G~~ 168 (442)
.+....+++.+.+..+ -..+.+++++++++|+..+++... ++++. |+...-+|.+... .+.. .|.+
T Consensus 97 ~~~~~~lae~L~~~~p----~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~-s~~~ 171 (460)
T PRK12403 97 HPAVIELSELLFSLLP----GHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATAL-GGMK 171 (460)
T ss_pred CHHHHHHHHHHHHhCC----CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhc-CCCc
Confidence 4455556666654322 123689999999999999988763 23333 4444556766432 2221 2221
Q ss_pred -----------EEEEecCCC--CCCcCC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHH
Q 046900 169 -----------IVPIHCDSS--NNFQIT--------PQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELL 226 (442)
Q Consensus 169 -----------v~~v~~~~~--~~~~~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~ 226 (442)
+..+|.... ..+... .+.+++.+.+. ...++.+|++..-....|.+. +.+-+++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr 249 (460)
T PRK12403 172 FMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL--GAENVAGFVAEPFQGAGGMIFPPESYWPEIQ 249 (460)
T ss_pred cccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh--CCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 222221100 001111 24455554321 113455555543355567755 566699999
Q ss_pred HHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc-eeEEEeecCHHHHHHHHH--
Q 046900 227 DFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARR-- 303 (442)
Q Consensus 227 ~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~-RiG~i~~~~~~~~~~~~~-- 303 (442)
++|++||+++|.||++..+...|..+. ...+.- .+.++ +++|.+| .|. .+|.+++ .+.+.+.+..
T Consensus 250 ~lc~~~g~lLI~DEV~tGfGRtG~~~a-~e~~gv------~PDiv---~~gK~lg-gG~~Piga~v~-~~~i~~~~~~~~ 317 (460)
T PRK12403 250 RICRQYDVLLCADEVIGGFGRTGEWFA-HEHFGF------EPDTL---SIAKGLT-SGYVPMGGLVL-SKRIAEALVEQG 317 (460)
T ss_pred HHHHHcCCEEEEeccccCCCcCchhhh-hhhcCC------CCCeE---EEccccc-ccccceEEEEE-CHHHHHHHhcCC
Confidence 999999999999999987644443221 111111 12222 4899998 784 8999888 5667666542
Q ss_pred ----ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHH-HHHHHHHHHH----HhCCCeeecCCceEEEEEecCCcc
Q 046900 304 ----MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQ-KRYQMIIEGL----RSAGIECLKGNAGLFCWMNLSPLL 374 (442)
Q Consensus 304 ----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~l~~~L----~~~g~~~~~~~~g~~~~~~~~~~~ 374 (442)
....+..++++.+++.+.|+-.+ ++ ...+..+ +.-+++.+.| .++++......-|+++.+++....
T Consensus 318 ~~~~~~~T~~gnPl~~Aaala~L~~i~--~~---~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~ 392 (460)
T PRK12403 318 GVFAHGLTYSGHPVAAAVAIANLKALR--DE---GVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDK 392 (460)
T ss_pred CccccCCCCCCCHHHHHHHHHHHHHHH--hc---cHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCc
Confidence 11223456777666666664211 10 1122222 2233333333 333433333455667777774311
Q ss_pred cc-cCh----hhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 375 EE-QTR----EGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 375 ~~-~~~----~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
.. ... .....+...++++ ||.+.+. .+.+|++.. .+++++++++++++.+++.+..
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~-------~~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 393 ATRKRFANENDLAWRCRTIGFEE-GVIIRST-------LGRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred cccccccchhHHHHHHHHHHHhC-CEEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 10 000 0123345556666 9999752 134888876 4599999999999999998865
No 303
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.64 E-value=5.6e-13 Score=134.12 Aligned_cols=352 Identities=10% Similarity=0.098 Sum_probs=194.8
Q ss_pred CCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCC-CcchHHHHHHHHHHHHHHhCCCCcc
Q 046900 44 STNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQD-YHGLKSFRQAMASFMEQIRGGRAKF 118 (442)
Q Consensus 44 ~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~ 118 (442)
+.....+|||..+ .+.++ ++.+.+.+.+..... ..+.. ..+..+....+|+.+.+... +.
T Consensus 85 D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~------------~~~~~~~~~~~~~~~~lae~L~~~~~---~~ 149 (504)
T PLN02760 85 DINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKL------------PFYHSFWNRTTKPSLDLAKELLEMFT---AR 149 (504)
T ss_pred ECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhc------------cceecccccCcHHHHHHHHHHHhhcC---CC
Confidence 3456678898764 23333 355555555443210 00111 11234556667776654321 11
Q ss_pred CCCcEEEecChHHHHHHHHHhhc-------CCC-CeEEEcCCCCcChHH-hHhhhcCcE------------EEEEecCCC
Q 046900 119 DLNRIVVTAGATAANELLTFILA-------DPG-DALLVPTPYYPGFDR-DLRWRTGIK------------IVPIHCDSS 177 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~-~~~~~~G~~------------v~~v~~~~~ 177 (442)
+-+.+++++++++|+..+++... .++ ..|+..+-+|.+... .+.. .|.. +..++.+.
T Consensus 150 ~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~sl-sg~~~~~~~~~~~~~~~~~~~~p~- 227 (504)
T PLN02760 150 KMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASL-SGLPALHQKFDLPAPFVLHTDCPH- 227 (504)
T ss_pred CCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhc-cCChhhccCCCCCCCCcEEeCCCc-
Confidence 23579999999999999988763 122 578877777776533 2221 2321 11122110
Q ss_pred CCCc-------------CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 178 NNFQ-------------ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 178 ~~~~-------------~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
.|. ...+.|++.+... ...++.+|++..-....|.+. +.+-+++|.++|++||+++|.||++.
T Consensus 228 -~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~T 304 (504)
T PLN02760 228 -YWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVIC 304 (504)
T ss_pred -ccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhh
Confidence 011 0123466655421 112454554443355667665 56669999999999999999999997
Q ss_pred cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH---------ccccCCCcHH
Q 046900 244 GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR---------MSSFTLISSQ 313 (442)
Q Consensus 244 ~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~---------~~~~~~~s~~ 313 (442)
.|...|..+. ...+.- .+| +.+|+|.+| .| +.+|.+++ ++.+.+.+.. ....+..+++
T Consensus 305 GfGRtG~~~a-~e~~gv-----~PD----ivtlgK~lg-gG~~PigAv~~-~~~i~d~~~~~~~~~~~~~h~~T~~gnPl 372 (504)
T PLN02760 305 AFGRLGTMFG-CDKYNI-----KPD----LVSLAKALS-SAYMPIGAVLV-SPEISDVIHSQSNKLGSFAHGFTYSGHPV 372 (504)
T ss_pred CCcccchhhH-HHhcCC-----CCc----EEEeccccc-CCccccceEee-cHHHHhhhhcccccccCcccCCCCCCCHH
Confidence 6544443211 111110 122 467899997 67 48999988 5667666542 1122445677
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh---CCCeeecCCceEEEEEecCCccccc-C----hhhHHHH
Q 046900 314 TQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS---AGIECLKGNAGLFCWMNLSPLLEEQ-T----REGELAL 385 (442)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~g~~~~~~~~g~~~~~~~~~~~~~~-~----~~~~~~l 385 (442)
+.+++.+.|+-.. + ....+..++.-+++.+.|++ .++......-|+++-+++....... . ..-...+
T Consensus 373 ~~Aaala~Le~i~---~--~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i 447 (504)
T PLN02760 373 SCAVALEALKIYK---E--RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYF 447 (504)
T ss_pred HHHHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHH
Confidence 7777666665211 1 11233333333444444433 3332222344567777664321100 0 0114556
Q ss_pred HHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 386 WDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 386 ~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
...++++ ||.+.++. ..+|++.. .+++++++++++++.+++.+...+
T Consensus 448 ~~~~~~~-Gvl~~~~g-------~~lrl~Ppl~it~eeid~~~~~l~~al~~~~~~ 495 (504)
T PLN02760 448 GAECKKR-GMLVRVAG-------DNIMMSPPLIITPEEVDELISIYGKALKATEER 495 (504)
T ss_pred HHHHHhC-CcEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 7777776 99997631 35899876 349999999999999999876543
No 304
>PRK05965 hypothetical protein; Provisional
Probab=99.64 E-value=4.4e-13 Score=133.93 Aligned_cols=311 Identities=15% Similarity=0.095 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC-------C-CCeEEEcCCCCcChHHhHhhhcCc---
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD-------P-GDALLVPTPYYPGFDRDLRWRTGI--- 167 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~~G~--- 167 (442)
+.+..+|+.+.+... -..+.+++++++++|++.+++.... + ..+|+...-+|.+.........|.
T Consensus 90 ~~~~~lae~L~~~~p----~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~ 165 (459)
T PRK05965 90 EPAIRLAAKLAERAP----GSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAF 165 (459)
T ss_pred HHHHHHHHHHHhhCC----CCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchh
Confidence 444556666654321 1246899999999999998876421 2 357888888887764321101111
Q ss_pred ---------EEEEEecCC--CCCCcCCH--------HHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHH
Q 046900 168 ---------KIVPIHCDS--SNNFQITP--------QALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLD 227 (442)
Q Consensus 168 ---------~v~~v~~~~--~~~~~~d~--------~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~ 227 (442)
.+..++... ...+.-|. +.+++.+.+. ...++.+|++...+...|.+. |.+-+++|.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~ 243 (459)
T PRK05965 166 HRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGWLKAMRE 243 (459)
T ss_pred hcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHHHHHHHH
Confidence 012222111 00011122 4566666532 113566666664466667754 6666999999
Q ss_pred HHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH---
Q 046900 228 FATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR--- 303 (442)
Q Consensus 228 ~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~--- 303 (442)
+|++||+++|.||+...|...|..+ ....+.- .+. +-+++|.++ .| +.+|.+++ ++.+.+.+..
T Consensus 244 lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv------~PD---iv~~gKgl~-gG~~Pi~av~~-~~~i~~~~~~~~~ 311 (459)
T PRK05965 244 ACRELGILFVADEVITGFGRTGPLF-ACEAEGV------VPD---LMTVAKGLT-SGYVPMGAVLM-SDHVYQGIADGAG 311 (459)
T ss_pred HHHHcCCEEEEechhccCccCchhh-hHhhcCC------CCC---eEEechhhc-cCCcceeEEEE-cHHHHHHHhcccc
Confidence 9999999999999999865555322 1111111 122 235799998 89 49999999 5666655531
Q ss_pred ------ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh---CCCeeecCCceEEEEEecCCcc
Q 046900 304 ------MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS---AGIECLKGNAGLFCWMNLSPLL 374 (442)
Q Consensus 304 ------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~g~~~~~~~~g~~~~~~~~~~~ 374 (442)
....+..++++.+++.+.|+-. ++ ....+..++.-+++.+.|++ ..+-.....-|+++-+++....
T Consensus 312 ~~~~~~h~~T~~gnpl~~Aaa~a~L~~l---~~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~ 386 (459)
T PRK05965 312 AAAPVGHGYTYSAHPVSAAVGLEVLRLY---HE--GGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADK 386 (459)
T ss_pred ccccccccCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccc
Confidence 1123456777766666665421 11 11222333333444444443 2221122345566667664211
Q ss_pred ccc-----ChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 375 EEQ-----TREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 375 ~~~-----~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
... .......+...++++ ||++.+. +...+|+... .++++++++++++|.+++.+...
T Consensus 387 ~~~~~~~~~~~~~~~i~~~~~~~-Gll~~~~------g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 387 ATKTPFDAALDPADRIFDRAYAN-GLVFRAF------GDGVLGFAPALCCTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred cccCCCCchhHHHHHHHHHHHhC-CeEEEec------CCcEEEEECCCcCCHHHHHHHHHHHHHHHHHHhc
Confidence 000 001245677777776 9999762 2356888865 44899999999999999987643
No 305
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.63 E-value=4.9e-14 Score=136.61 Aligned_cols=286 Identities=13% Similarity=0.131 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHhCCCCcc-CCCcEEEe-cChHHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEEEec
Q 046900 99 SFRQAMASFMEQIRGGRAKF-DLNRIVVT-AGATAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~-~~~~i~~t-~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~v~~ 174 (442)
++-+.+.+.+.+.++ . +..+|+++ ++++.+++.++..++.+||++++..-+..+ +.+.++ +.|.. ..+..
T Consensus 48 ~~~~~~~~~l~~l~~----~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r~~~~a~-~~g~~-~~~~~ 121 (360)
T PRK05355 48 AVAEEAEADLRELLN----IPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKKAIKEAK-KYGEV-NVAAS 121 (360)
T ss_pred HHHHHHHHHHHHHhC----CCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHH-HhCCc-eEEec
Confidence 444444444444433 3 23456666 558889999999999999998887765543 344556 47865 55554
Q ss_pred CCCCCCcCCHHHHHH-HHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 175 DSSNNFQITPQALEA-AYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~-~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
++..++ .+..++++ .+++ ++++|.++...+.||...+ .+.+| +++++|+|.+.+- +.. ..
T Consensus 122 ~~~~g~-~~~~~~~~~~l~~------~~~~V~~th~eTstGv~~~--~i~~i------~g~l~vVDavss~---g~~-~i 182 (360)
T PRK05355 122 SEDDGF-TYIPPLDEWQLSD------DAAYVHYTSNETIDGTEFH--ELPDT------GDVPLVADMSSDI---LSR-PI 182 (360)
T ss_pred ccccCC-CCCCChhhccCCC------CCCEEEEccCCCcceEecC--ccccc------CCCcEEEEcCccc---cCc-cC
Confidence 431233 23333333 5533 6789999999999999984 24444 7999999999883 332 23
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--------------ccccCCCcHHHHHHHH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--------------MSSFTLISSQTQYLLA 319 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--------------~~~~~~~s~~~q~~~~ 319 (442)
.+.++ + +++.|..|.+|.+| +|+++++++.+ +.+.. ...+++.+.....++.
T Consensus 183 dv~~~---------d--~~~~ssqK~lgP~G--lg~l~~s~~~l-~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~ 248 (360)
T PRK05355 183 DVSKF---------G--LIYAGAQKNIGPAG--LTIVIVREDLL-GRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAG 248 (360)
T ss_pred CHHHc---------c--EEEEeccccccCCc--eEEEEECHHHH-hhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHH
Confidence 33322 3 67788999999777 68888854433 22221 1112334444445555
Q ss_pred HHhcCchhHHH--HHHHHHHHHHHHHHHHHHHHHhCCCe-e-ec--CCceEEEEEecCCcccccChhhHHHHHHHHHHcC
Q 046900 320 SMLSNKKFTEN--YIKTNRERLQKRYQMIIEGLRSAGIE-C-LK--GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEV 393 (442)
Q Consensus 320 ~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~-~-~~--~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 393 (442)
+.|+ ++.+ -++...++.++..+++.+.|++.++. . .. ...+..+.+.++... ...++...+.++
T Consensus 249 ~aL~---~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~------~~~~~~~~~~~~- 318 (360)
T PRK05355 249 LVFK---WLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEE------LDKKFLAEAKAA- 318 (360)
T ss_pred HHHH---HHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChH------HHHHHHHHHHHC-
Confidence 5554 2222 26777888888999999999988642 2 11 123334555666531 234555666555
Q ss_pred cEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHH
Q 046900 394 KLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 394 gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~ 437 (442)
|+.+.+|.. ..+.+|+|+.. .+.++++++++.|+++++++
T Consensus 319 Gi~~~~~~~----~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~~ 359 (360)
T PRK05355 319 GLVGLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFERRH 359 (360)
T ss_pred CCcccCCCC----ccCcEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 999877653 24689999862 27999999999999988764
No 306
>PRK04311 selenocysteine synthase; Provisional
Probab=99.63 E-value=6.5e-13 Score=131.70 Aligned_cols=298 Identities=16% Similarity=0.182 Sum_probs=178.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC------hHHhHhhhcCcEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPG------FDRDLRWRTGIKIV 170 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~------~~~~~~~~~G~~v~ 170 (442)
+..+++.+|++++ .+..+++++++.++.+++.++ .+||.|+++...+.. +...+. ..|++++
T Consensus 129 ~~~~e~~lA~l~G----------ae~a~vv~sgtaAl~l~l~~l-~~GdeVIvs~~e~~~~ggs~~i~~~~~-~~G~~l~ 196 (464)
T PRK04311 129 DRALAALLCALTG----------AEDALVVNNNAAAVLLALNAL-AAGKEVIVSRGELVEIGGAFRIPDVMR-QAGARLV 196 (464)
T ss_pred HHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHh-CCCCEEEEcchhhhhcCcchhhHHHHH-HCCcEEE
Confidence 3577777777764 446788888889999988665 799999998764431 223455 4899999
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCC--CC--cCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNP--LG--ATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NP--tG--~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
.++.+. ..+++++++++++ ++++|++++++|| +| ...+ +++|+++|++||+++++|...+.+.
T Consensus 197 ~v~~~~----~t~~~dle~aI~~------~TklV~~vh~sN~~i~G~~~~~d---l~eI~~lak~~gi~vivD~gsG~l~ 263 (464)
T PRK04311 197 EVGTTN----RTHLRDYEQAINE------NTALLLKVHTSNYRIEGFTKEVS---LAELAALGKEHGLPVVYDLGSGSLV 263 (464)
T ss_pred EECCCC----CCCHHHHHHhcCc------cCeEEEEEcCCCccccccCCcCC---HHHHHHHHHHcCCeEEEECCCcccc
Confidence 987643 2468999999875 7899999999998 35 4445 8889999999999999999654321
Q ss_pred ----CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHH
Q 046900 247 ----FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLAS 320 (442)
Q Consensus 247 ----~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~ 320 (442)
|+-...+.+..... .+--+++.|.+|.+|-| ..|++++ ++.+.+.+++ ......+......+..+
T Consensus 264 ~~~~~gl~~~p~~~~~l~------~GaDiv~fSg~K~LgGp--~~G~i~g-~~~li~~l~~~~~~r~lr~dk~~l~~l~~ 334 (464)
T PRK04311 264 DLSQYGLPDEPTVQELLA------AGVDLVTFSGDKLLGGP--QAGIIVG-KKELIARLKKHPLKRALRVDKLTLAALEA 334 (464)
T ss_pred cchhccCCCCCchhhHHh------cCCcEEEecCcccccCC--ceEEEEE-cHHHHHHHhhchhHHHHhcchHHHHHHHH
Confidence 11001112222222 13448889999998634 5899998 4555554442 11112222222222222
Q ss_pred ----HhcCch-hH----HHHHHHHHHHHHHHHHHHHHHHHhC---CC--eeecC----CceEEEEEecCCcccc--cChh
Q 046900 321 ----MLSNKK-FT----ENYIKTNRERLQKRYQMIIEGLRSA---GI--ECLKG----NAGLFCWMNLSPLLEE--QTRE 380 (442)
Q Consensus 321 ----~l~~~~-~~----~~~~~~~~~~~~~~~~~l~~~L~~~---g~--~~~~~----~~g~~~~~~~~~~~~~--~~~~ 380 (442)
++...+ +. .+.+....+...++.+.+.+.|++. ++ ++... .||-.--..+|...-. ....
T Consensus 335 ~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~ 414 (464)
T PRK04311 335 TLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDR 414 (464)
T ss_pred HHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCC
Confidence 222211 10 1112233466677888888888764 22 23321 1221111111111000 0001
Q ss_pred hHHHHHHHHHHc-CcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 381 GELALWDSMLHE-VKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 381 ~~~~l~~~l~~~-~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
...++.+.|.+- ..|..+ -.++.+.+-+.++.+++++..+++|++++.
T Consensus 415 ~~~~l~~~lr~~~~~i~~r-------~~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 415 SLEALAARLRLLPPPVIGR-------IEDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred CHHHHHHHHhcCCCCEEEE-------EECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 256777666432 124443 235678898888888999999999998753
No 307
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.63 E-value=6.6e-13 Score=132.46 Aligned_cols=342 Identities=14% Similarity=0.179 Sum_probs=189.9
Q ss_pred CCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+...+.+||+..+- +.+ .++.+.+.+.+.... ...+.. ..++...+|+.+.+... .
T Consensus 95 D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~------------~~~~~~---~~~~~~~lAe~l~~~~p-----~ 154 (474)
T PLN02482 95 DVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKK------------GTSFGA---PCLLENVLAEMVIDAVP-----S 154 (474)
T ss_pred ECCCCEEEEecccccccccCCCCHHHHHHHHHHHhh------------CCCCCC---CCHHHHHHHHHHHHhCC-----C
Confidence 34456778886543 223 235555555544321 111211 23556677777765422 1
Q ss_pred CCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhh--cCcEEE------EEecCC-C----CCCcCCH
Q 046900 120 LNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWR--TGIKIV------PIHCDS-S----NNFQITP 184 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~--~G~~v~------~v~~~~-~----~~~~~d~ 184 (442)
.+.+.+++++++++..+++... ...++|+...-+|.+....+... .|.... .+|... . -.| -|+
T Consensus 155 ~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~ 233 (474)
T PLN02482 155 VEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDL 233 (474)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CCh
Confidence 4789999999999998877542 23367888888888754321100 011000 000000 0 011 168
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC-HHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhc
Q 046900 185 QALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ-RSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQ 263 (442)
Q Consensus 185 ~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~-~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~ 263 (442)
+.+++.+.++ +.++.+|++.......|.+.+ .+-+++|.++|++||+++|.||++..+ ..+.. ...+...
T Consensus 234 ~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~--ga~~~~g--- 304 (474)
T PLN02482 234 EAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYG--GAQEYFG--- 304 (474)
T ss_pred HHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcc--hHhHHhC---
Confidence 8899888642 234555554433566787665 566999999999999999999999765 33321 1111111
Q ss_pred CCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc-----ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 046900 264 YKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS-----SFTLISSQTQYLLASMLSNKKFTENYIKTNRER 338 (442)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~-----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 338 (442)
..++ +.+|+|.+| .|+.+|.+++ ++++.+.+.... ..+..++++..++.+.|+... + ....++
T Consensus 305 -v~PD----i~t~gK~lg-gG~Pigav~g-~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~---~--~~~~~~ 372 (474)
T PLN02482 305 -ITPD----LTTLGKVIG-GGLPVGAYGG-RREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQ---Q--PGTYEY 372 (474)
T ss_pred -CCCC----EEEecchhh-CCCceEEEEE-cHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHh---c--cCHHHH
Confidence 0112 347899998 8999999988 667777664211 122345666555555544211 0 112333
Q ss_pred HHHHHHHHHHHHHh----CCCeee-cCCceEEEEEecCC-cc----c--ccChhhHHHHHHHHHHcCcEEEeCCCCCCCC
Q 046900 339 LQKRYQMIIEGLRS----AGIECL-KGNAGLFCWMNLSP-LL----E--EQTREGELALWDSMLHEVKLNISPGSSCHCS 406 (442)
Q Consensus 339 ~~~~~~~l~~~L~~----~g~~~~-~~~~g~~~~~~~~~-~~----~--~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~ 406 (442)
+.++-+++.+.|++ .|+.+. ...++++- +.+.. .. + ..+......++..|+++ ||++.|.. +.
T Consensus 373 ~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~g-i~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-Gv~~~~~~-~~-- 447 (474)
T PLN02482 373 LDKITKKLIQGILEAGKKAGHEMCGGYISGMFG-FFFTEGPVYNFADAKKSDTAKFARFHRGMLEE-GVYLAPSQ-FE-- 447 (474)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEcccceEEE-EEEecCCccChhhhccCCHHHHHHHHHHHHHC-CeEEeccC-CC--
Confidence 33444444444433 345544 23345432 22211 10 0 01111245677888776 99998732 11
Q ss_pred CCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 407 EPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 407 ~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
.++ +++.. ++++++++++++.+++.+
T Consensus 448 -~~~--psl~h-t~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 448 -AGF--TSLAH-TEEDIDFTIAAAERVLAR 473 (474)
T ss_pred -CCc--CCCCC-CHHHHHHHHHHHHHHHHh
Confidence 121 45555 899999999999998864
No 308
>PLN02263 serine decarboxylase
Probab=99.63 E-value=7.3e-13 Score=129.80 Aligned_cols=291 Identities=11% Similarity=0.051 Sum_probs=192.9
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCC--cEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLN--RIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~--~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~ 171 (442)
+..++.+.+-+|+.+.++ .+++ .-++|+|+|+++..++.+-.+ +...|+++.-+|..+..++.. +|++++.
T Consensus 130 ~s~~~E~~Vi~wla~L~g----~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~l-lgi~~~~ 204 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWE----IEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARM-YRMECVK 204 (470)
T ss_pred hHHHHHHHHHHHHHHHhC----CCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHh-cCCcceE
Confidence 568999999999999877 3333 368899999999987766533 234788899999999999996 9999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCc-----EEEEeccCCcCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNI-----HLVSDEIYSGSA 246 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~-----~vi~De~y~~~~ 246 (442)
||.++ ++.+|++.|+++|.+. ..++-+|+.+-++.++|.+=+ +++|.++|+++|+ |+.+|.+|+.+.
T Consensus 205 Vp~d~--~g~mD~~aL~~aI~~d---~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~ 276 (470)
T PLN02263 205 VDTLV--SGEIDCADFKAKLLAN---KDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLM 276 (470)
T ss_pred eccCC--CCcCcHHHHHHHHHhC---CCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhH
Confidence 99875 4689999999999752 123445566778899999977 7788888888886 999999998755
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc-------cCCCc-----HHH
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS-------FTLIS-----SQT 314 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~-------~~~~s-----~~~ 314 (442)
..-....+...+ .. .-.=+..+++|.++ ....+|.++..++.+ ..+..... ....+ .+.
T Consensus 277 lPf~~~~~~~df------~~-~vDSIsvD~HK~l~-~P~~cgvll~R~~~~-~~~~~~~~Yl~~~d~ti~gSR~g~~al~ 347 (470)
T PLN02263 277 MPFVKRAPKVTF------KK-PIGSVSVSGHKFVG-CPMPCGVQITRMEHI-NVLSSNVEYLASRDATIMGSRNGHAPIF 347 (470)
T ss_pred hhhcccccccCC------Cc-CccEEEECCccccC-CCcCEEEEEEehhhH-hhhccChHhhCCCCCCcCCCCCcHHHHH
Confidence 411000000011 00 11123468999886 678999999864433 22221111 11112 222
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-CCceEEEEEecCCcccccChhhHHHHHHHHHHcC
Q 046900 315 QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK-GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEV 393 (442)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 393 (442)
.++....+. .+-+++..+...+..+++.+.|++.|+.... |... .+.+..|. ... ..+
T Consensus 348 lW~~L~~~G-----~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~-~V~f~~p~---------~~~-----~~~- 406 (470)
T PLN02263 348 LWYTLNRKG-----YRGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSS-TVVFERPK---------DEE-----FVR- 406 (470)
T ss_pred HHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCce-EEEEecCc---------hHH-----hhc-
Confidence 233333222 2335666677777888999999988877544 5544 44444332 111 133
Q ss_pred cEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHH
Q 046900 394 KLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 394 gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~ 436 (442)
|..+.+- +..++|++.. .+.+.++++++.|++....
T Consensus 407 gW~L~~~-------~~~~Hivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 407 RWQLACQ-------GNIAHVVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred ceEEccC-------CCcEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 7766641 2458888863 4789999999999887664
No 309
>PRK07482 hypothetical protein; Provisional
Probab=99.62 E-value=7.4e-13 Score=132.39 Aligned_cols=356 Identities=10% Similarity=0.018 Sum_probs=198.9
Q ss_pred CCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCC-cchHHHHHHHHHHHHHHhCCC
Q 046900 41 YEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDY-HGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 41 ~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~ 115 (442)
|..+...+.+||+..+- ..+ .++.+.+.+.++.+.. ..+... .-..+.+..+|+.+.+...
T Consensus 43 ~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~------------~~~~~~~~~~~~~~~~lAe~L~~~~p-- 108 (461)
T PRK07482 43 RITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKEL------------AYYHTYVGHGTEASITLSKRIIDRAP-- 108 (461)
T ss_pred EEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhc------------CccccccccCCHHHHHHHHHHHHhCC--
Confidence 33345567788887653 222 3355555555443211 001111 1124556667777765321
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhc------C-C-CCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecC
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILA------D-P-GDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCD 175 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~ 175 (442)
-.-+.+++++++++|++.+++... . + ..+|+...-+|.+....+....|. .+..++..
T Consensus 109 --~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p 186 (461)
T PRK07482 109 --AGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAP 186 (461)
T ss_pred --CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCC
Confidence 124689999999999999887653 1 1 357888888887753221100110 11112111
Q ss_pred CCCC---Cc--------CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 176 SSNN---FQ--------ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 176 ~~~~---~~--------~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
.... +. -+++.+++.+.+. ...++.+|++.......|.+. +.+-+++|.++|++||+++|.||+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~t 264 (461)
T PRK07482 187 HYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVT 264 (461)
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc
Confidence 0000 00 0346667666421 123565655554355567764 56679999999999999999999999
Q ss_pred cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc-eeEEEeecCHHHHHHHHH---------ccccCCCcHH
Q 046900 244 GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARR---------MSSFTLISSQ 313 (442)
Q Consensus 244 ~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~-RiG~i~~~~~~~~~~~~~---------~~~~~~~s~~ 313 (442)
.|...+..+.. ..+.- .+.++ +++|.++ .|+ .+|.+++ .+.+.+.+.. ....+..+++
T Consensus 265 GfGRtG~~~a~-~~~gv------~PDiv---~~gKgl~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~h~~T~~gnpl 332 (461)
T PRK07482 265 GFGRLGSMFGS-DHYGI------EPDLI---TVAKGLT-SAYAPLSGSIV-GEKVWDVLEQGSDEHGAIGHGWTYSGHPI 332 (461)
T ss_pred CCCcCcchhhH-HhcCC------CCCEE---EEccccc-cCccccceeee-cHHHHHHHhcccccCCccccCCCCCcCHH
Confidence 87555543221 11111 12232 4799997 785 8999888 5666665542 1123446777
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHH----hCCCeeecCCceEEEEEecCCcccc-cCh----hhHHH
Q 046900 314 TQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLR----SAGIECLKGNAGLFCWMNLSPLLEE-QTR----EGELA 384 (442)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~g~~~~~~~~g~~~~~~~~~~~~~-~~~----~~~~~ 384 (442)
+.+++.+.|+-.. + ....+..++.-+++.+.|+ ++++......-|+++.+++...... ..+ .....
T Consensus 333 ~~Aaa~a~L~~~~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~ 407 (461)
T PRK07482 333 CAAAALANLDILE--R---ENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQ 407 (461)
T ss_pred HHHHHHHHHHHHH--h---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHH
Confidence 7777766665211 1 0122223333344444443 3343333345566777777532110 000 11356
Q ss_pred HHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 385 LWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 385 l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
++..++++ ||++.++. ....+|+..+ .++++++++++++|.+++++.
T Consensus 408 i~~~~~~~-Gvl~~~~~-----~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 408 VSAAALER-GVIARAMP-----HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred HHHHHHHC-CcEEecCC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 77778776 99986532 1246888755 459999999999999999875
No 310
>PRK07046 aminotransferase; Validated
Probab=99.62 E-value=8.4e-13 Score=131.49 Aligned_cols=295 Identities=16% Similarity=0.137 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhh--cC-------
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWR--TG------- 166 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~--~G------- 166 (442)
.+....+|+.+.+.. ..+.+.+++++++|...+++... ...++|+...-+|.+........ .+
T Consensus 114 ~~~~~~lAe~l~~~~------~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~ 187 (453)
T PRK07046 114 SEDAAWVGEELARRF------GLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPG 187 (453)
T ss_pred CHHHHHHHHHHHHHh------CCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCC
Confidence 355556677666542 25789999999999998877642 23467888888888764322100 01
Q ss_pred ---c------EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEE
Q 046900 167 ---I------KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 167 ---~------~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~v 236 (442)
. .+..+ .|. |++.+++.+.. .++.+|++..-....|.+. +.+-++++.++|++||+++
T Consensus 188 ~~g~~~~~~~~~~~~------~~n-d~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~ll 255 (453)
T PRK07046 188 LLGQVHDLTATTRVV------EFN-DLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLL 255 (453)
T ss_pred CCCCCccccCceEee------CCC-CHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEE
Confidence 0 01111 121 78888888742 2555555543244446554 4566999999999999999
Q ss_pred EEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-----------cc
Q 046900 237 VSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-----------MS 305 (442)
Q Consensus 237 i~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-----------~~ 305 (442)
|.||+.. +..+-........+. +| +-+++|.+| .|+.+|.+++ ++++.+.+.. ..
T Consensus 256 I~DEV~t-fr~g~Gg~~~~~gv~-------PD----i~t~gK~lg-gG~Pi~av~g-~~~i~~~~~~~~~~~~~~~~~~~ 321 (453)
T PRK07046 256 VIDETHT-ISSGPGGYTRAHGLE-------PD----FLVVGKPIA-GGVPCAVYGF-SAELAERAQAAKASAPPGHSGIG 321 (453)
T ss_pred EEEcccc-CccCCcchhHHhCCC-------cc----ceeehhhhc-CCCcceeeee-hHHHHHHHhhccccCCCCCceeC
Confidence 9999986 322111111111111 12 236899998 8999999988 5666666542 11
Q ss_pred ccCCCcHHHHHHHHHHhc---CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCC-cccc-----
Q 046900 306 SFTLISSQTQYLLASMLS---NKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSP-LLEE----- 376 (442)
Q Consensus 306 ~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~-~~~~----- 376 (442)
..+..++++..++.+.|+ ..+. .+++.++-+.+ ++.|.+.+.+.++.+....-|..+.+.+.. ....
T Consensus 322 ~T~~gnpl~~aa~~a~L~~l~~~~~-~~~~~~~g~~l---~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~ 397 (453)
T PRK07046 322 TTLSANALAMAAMRATLAEVMTEAA-YAHMLALAARL---AAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAA 397 (453)
T ss_pred CCCcccHHHHHHHHHHHHHHhcccH-HHHHHHHHHHH---HHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHh
Confidence 223456776666666554 2222 12222222333 233333334455443322222233343321 1100
Q ss_pred --cChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 377 --QTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 377 --~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
....-...++..++++ ||.+.|. ...++++... ++++++++++++.+++++.
T Consensus 398 ~~~~~~~~~~~~~~~~~~-Gv~~~~~-------~~~~~~~p~~-t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 398 AALDPELEAALHLYLLNR-GVLITPF-------HNMMLVCPAT-TAADVDRLVAAFDACLGEL 451 (453)
T ss_pred cccCHHHHHHHHHHHHHC-CCEEecc-------cCcEEEeCCC-CHHHHHHHHHHHHHHHHHH
Confidence 0111234566777776 9998862 1347888864 9999999999999998765
No 311
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.62 E-value=1.3e-12 Score=130.13 Aligned_cols=349 Identities=12% Similarity=0.076 Sum_probs=195.8
Q ss_pred CCCCCCceeeeecc--cccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCcc
Q 046900 43 ESTNPSGVIQMGLA--ENQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKF 118 (442)
Q Consensus 43 ~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~ 118 (442)
.+.....+||+..+ ...+ .++.+.+.+.++...... .....+ ..+....+|+.+.+..+ .
T Consensus 49 ~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-------~~~~~~-----~~~~~~~lAe~L~~~~p----~ 112 (453)
T PRK06943 49 YDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEH-------AMLAGC-----THEPAIELAERLAALTG----G 112 (453)
T ss_pred EeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCC-------cccccc-----CCHHHHHHHHHHHHhCC----C
Confidence 34556778888655 2333 335555555544321000 000011 13445566666665322 1
Q ss_pred CCCcEEEecChHHHHHHHHHhhc-------CC-CCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCCCC
Q 046900 119 DLNRIVVTAGATAANELLTFILA-------DP-GDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDSSN 178 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~-------~~-gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~~~ 178 (442)
.-+.++++++++++++.+++... .+ ..+|+...-+|.+....+....|- .+..++.....
T Consensus 113 ~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~ 192 (453)
T PRK06943 113 TLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDAR 192 (453)
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcc
Confidence 22589999999999999887652 12 357888888887754221101111 11222221110
Q ss_pred C--Cc--------CCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 179 N--FQ--------ITPQALEAAYKEAESKDMRVRGVLITN-PSNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 179 ~--~~--------~d~~~l~~~l~~~~~~~~~~~~v~l~~-P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
+ +. -+++.+++.+.+ .+.++.+|++.. ...-.|.+ .+.+-+++|.++|++||+++|.||+...+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~G 269 (453)
T PRK06943 193 GARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCG 269 (453)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCC
Confidence 0 00 124666666653 234666666654 25666764 566779999999999999999999998865
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--------ccccCCCcHHHHHH
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR--------MSSFTLISSQTQYL 317 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~--------~~~~~~~s~~~q~~ 317 (442)
..|..+ ....+.- .+.+ -+++|.++ .| +.+|.+++ ++++.+.+.. ....+..++++.++
T Consensus 270 RtG~~f-a~~~~gv------~PDi---vt~gKgl~-gG~~Pi~av~~-~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aa 337 (453)
T PRK06943 270 RTGTFF-ACEQAGV------WPDF---LCLSKGIS-GGYLPLSLVLS-RDAIFAAFYDDDVTRGFLHSHSYTGNPLACRA 337 (453)
T ss_pred CCcchh-HHHhCCC------CCCe---Eeeehhhc-cCcccceEEEE-cHHHHHhhcccCccCCccCCCCCCCCHHHHHH
Confidence 444322 1111111 1223 35699998 88 59999999 5666666542 12234457777666
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcC
Q 046900 318 LASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEV 393 (442)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 393 (442)
+.+.|+-.+ + ....++.++.-+++.+.|+++ ++. ....-|+++-+++.... .........+...++++
T Consensus 338 a~a~L~~i~---~--~~l~~~~~~~G~~l~~~L~~l~~~~~v~-~vrG~Gl~~gvel~~~~-~~~~~~~~~i~~~~~~~- 409 (453)
T PRK06943 338 ALATLDLFA---E--DDVLARNARKSARLRAALAPLAAHPQVR-HLRQRGTIFAFDVALDG-DAARTFSRRFFEAALER- 409 (453)
T ss_pred HHHHHHHHH---h--cCHHHHHHHHHHHHHHHHHHHhcCCCEE-eEeccccEEEEEEccCC-CcchHHHHHHHHHHHHC-
Confidence 666655211 1 112223333333444444332 232 22345567777764211 11111245677777776
Q ss_pred cEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 394 KLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 394 gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
||++.+.. ..+|++.. .++++++++++++|.+++++.
T Consensus 410 Gll~~~~g-------~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 410 ELLLRPIG-------TTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred CcEEEecC-------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 99997631 35899854 349999999999999999875
No 312
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.62 E-value=1.3e-12 Score=130.36 Aligned_cols=309 Identities=16% Similarity=0.129 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHH-hHhhhcCcE-------
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDR-DLRWRTGIK------- 168 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~-~~~~~~G~~------- 168 (442)
+.+..+++.+.+..+ -..+.+++++++++++..+++... .....|+...-+|.+... .+.. .|..
T Consensus 113 ~~~~~lae~L~~~~p----~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~-~~~~~~~~~~~ 187 (459)
T PRK06082 113 ETAIECAEKLTEIAG----GELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISV-GGEACFRQGMG 187 (459)
T ss_pred HHHHHHHHHHHHhCC----CCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhh-cCCcccccCCC
Confidence 455566666665422 123689999999999999877542 223678877777776543 2221 2211
Q ss_pred -----EEEEecCCC--CCCc-CC------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCc
Q 046900 169 -----IVPIHCDSS--NNFQ-IT------PQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNI 234 (442)
Q Consensus 169 -----v~~v~~~~~--~~~~-~d------~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~ 234 (442)
+..+|.... ..|. .| ++.+++.+.+ ..++.+|++....+..+.+.+.+-+++|.++|++||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~----~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~ 263 (459)
T PRK06082 188 PLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK----EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNV 263 (459)
T ss_pred CCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc----CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 122221110 0011 11 2446666642 1245555554335544456677789999999999999
Q ss_pred EEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--ccccCCCc
Q 046900 235 HLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR--MSSFTLIS 311 (442)
Q Consensus 235 ~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~--~~~~~~~s 311 (442)
++|.||++..+...|..+. ...+.- .+| ++ +++|.+| .| +.+|.+++ .+.+...... ....+..+
T Consensus 264 llI~DEV~tG~GRtG~~fa-~e~~gv-----~PD-iv---~~gKgl~-gG~~P~~av~~-~~~i~~~~~~~~~~~T~~gn 331 (459)
T PRK06082 264 LLIIDEIPNGMGRTGEWFT-HQAYGI-----EPD-IL---CIGKGLG-GGLVPIAAMIT-KDKYNTAAQISLGHYTHEKS 331 (459)
T ss_pred EEEEechhhCCCccchhhH-hHhhCC-----CCC-EE---Eeccccc-CCCCcceEEEE-cHHHHhhccCCCCCCCCCcC
Confidence 9999999987544443211 111111 122 22 4899998 77 59999998 4555543321 11234456
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCCcccc--cChhhHHHH
Q 046900 312 SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSPLLEE--QTREGELAL 385 (442)
Q Consensus 312 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l 385 (442)
+++.+++.+.|+-. ++ ....+..+++-+++.+.|++ +++......-|+++.+++...... ........+
T Consensus 332 pl~~aaa~a~L~~l---~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~ 406 (459)
T PRK06082 332 PLGCAAALATIEVI---EQ--EGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAV 406 (459)
T ss_pred HHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHH
Confidence 77666666655421 11 11233334444444444433 333222234456777777431110 111124567
Q ss_pred HHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 386 WDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 386 ~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
...++++ ||++.+. ....+|++.. .+++++++++++++.+++.+..+.
T Consensus 407 ~~~~~~~-Gvl~~~~------~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~~ 455 (459)
T PRK06082 407 LYRCLNN-GLSFKVS------QGNVIQLSPPLIITREELTQALAILEEAIAKICQD 455 (459)
T ss_pred HHHHHhC-CCEEEec------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhhh
Confidence 7777776 9998763 1357999876 458999999999999999887554
No 313
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.62 E-value=5.7e-13 Score=131.81 Aligned_cols=346 Identities=13% Similarity=0.098 Sum_probs=191.6
Q ss_pred CCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCc
Q 046900 42 EESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK 117 (442)
Q Consensus 42 ~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~ 117 (442)
..+.....+||+..+. ..+ .++.+.+.+.+.... ...+. -..+.+..+|+.+.+..+
T Consensus 47 l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~------------~~~~~---~~~~~~~~la~~L~~~~~---- 107 (433)
T PRK00615 47 FIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAER------------GTSYG---LTSEQEILFAEELFSYLG---- 107 (433)
T ss_pred EEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHh------------CCCCC---CCCHHHHHHHHHHHHhCC----
Confidence 3344566788886553 223 335555555544321 01111 112345556666654322
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHh----HhhhcCcEEEE----EecCC--CC----CCc
Q 046900 118 FDLNRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRD----LRWRTGIKIVP----IHCDS--SN----NFQ 181 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~----~~~~~G~~v~~----v~~~~--~~----~~~ 181 (442)
...+.+.+++++++|++.+++.... ....|+...-+|.+.... ... .+-.... ..... .. .|
T Consensus 108 ~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 185 (433)
T PRK00615 108 LEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISF-SETSLDTLTHLVDTDLAHPLTLSLPY- 185 (433)
T ss_pred CCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCccccc-CCCCcCcCCCCCCCCCCCCCeEeCCC-
Confidence 1235899999999999998876522 235788778888775421 110 1100000 00000 00 01
Q ss_pred CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC-HHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHh
Q 046900 182 ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ-RSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILE 260 (442)
Q Consensus 182 ~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~-~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~ 260 (442)
-|.+.+++.+.+. +.++.+|++.......|...+ .+-+++|.++|++||+++|.||++..+ ..+..+ ..+...
T Consensus 186 ~d~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~g--a~~~~g 259 (433)
T PRK00615 186 NDFQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGG--AAAIYH 259 (433)
T ss_pred CCHHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhH--HHHhcC
Confidence 2678888888643 234555444433555677664 566999999999999999999999765 333211 111100
Q ss_pred hhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc-----ccCCCcHHHHHHHHHHhcCchhHHHHHHHH
Q 046900 261 ARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS-----SFTLISSQTQYLLASMLSNKKFTENYIKTN 335 (442)
Q Consensus 261 ~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~-----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 335 (442)
..++ + .+|+|++| .|+.+|++++ ++.+.+.+.... ..+..+++..+++.+.|+-.. + ...
T Consensus 260 ----v~PD-i---~~~gK~lg-gG~p~~av~~-~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~---~--~~~ 324 (433)
T PRK00615 260 ----VKPD-I---TVYGKILG-GGLPAAAVVA-HKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCR---E--QGF 324 (433)
T ss_pred ----CCCC-e---EEEccccc-CCcceeeeee-cHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHh---c--ccH
Confidence 0122 2 25899998 7888999999 566776664211 123346666666555554211 1 112
Q ss_pred HHHHHHHHHHH----HHHHHhCCCeeecCCceEEEEEecCCcccc-------cChhhHHHHHHHHHHcCcEEEeCCCCCC
Q 046900 336 RERLQKRYQMI----IEGLRSAGIECLKGNAGLFCWMNLSPLLEE-------QTREGELALWDSMLHEVKLNISPGSSCH 404 (442)
Q Consensus 336 ~~~~~~~~~~l----~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~l~~~l~~~~gi~v~pg~~f~ 404 (442)
.+.++++-+++ .+.+.+.|+.+.....|.++.+.+...... ........++..|+++ ||.+.|... .
T Consensus 325 ~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~-~ 402 (433)
T PRK00615 325 YTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSK-GVYLSPSPF-E 402 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHC-CeeecCccc-c
Confidence 23333333333 344444455433222566777777532110 0112245778888777 999987532 1
Q ss_pred CCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 405 CSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 405 ~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.+ =++... ++++++++++++.+++++.
T Consensus 403 ----~~-~ls~~h-t~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 403 ----AS-FLSSAH-SMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred ----cc-ceecCC-CHHHHHHHHHHHHHHHHHH
Confidence 11 256666 8999999999999998874
No 314
>PRK06917 hypothetical protein; Provisional
Probab=99.61 E-value=2.6e-12 Score=127.96 Aligned_cols=364 Identities=13% Similarity=0.143 Sum_probs=199.5
Q ss_pred CCCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+...+.+||+..+. ..+ .++.+.+.+.++..... ..+.. .-..+.+..+|+.+.+...
T Consensus 23 ~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~-----------~~~~~-~~~~~~~~~lae~L~~~~p-- 88 (447)
T PRK06917 23 VYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVS-----------FVYRS-QFTSEPAEKLAKKLSDLSP-- 88 (447)
T ss_pred eEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCc-----------Ccccc-ccCCHHHHHHHHHHHHhCC--
Confidence 344445567788986552 223 33555555554432110 00100 0113555567777665321
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhcC-------C-CCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecC
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILAD-------P-GDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCD 175 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~ 175 (442)
-..+.+++++++++|++.+++.... + ..+|+...-+|.+....+....|. .+..++..
T Consensus 89 --~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p 166 (447)
T PRK06917 89 --GDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAP 166 (447)
T ss_pred --CCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCC
Confidence 1235799999999999998876521 2 367888888887765432211221 11112211
Q ss_pred CCCC--CcC--------CHHHHHHHHHHHHhcCCceeEEEEeCCC-CCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 176 SSNN--FQI--------TPQALEAAYKEAESKDMRVRGVLITNPS-NPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 176 ~~~~--~~~--------d~~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
.... +.- +.+.+++.+.+.. ..++.+|++..-. +-.|.+ .+.+-+++|.++|++||+++|.||++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t 244 (447)
T PRK06917 167 YCYRCPVQKVYPTCQLACATELETAIERIG--AEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT 244 (447)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 1000 001 2355666665321 1256566655323 344554 467779999999999999999999998
Q ss_pred cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc-eeEEEeecCHHHHHHHHHc------cccCCCcHHHHH
Q 046900 244 GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARRM------SSFTLISSQTQY 316 (442)
Q Consensus 244 ~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~-RiG~i~~~~~~~~~~~~~~------~~~~~~s~~~q~ 316 (442)
.+...+..+. ...+.- .++ +-+++|.+| .|+ .+|.+++ .+.+.+.+... ...+..++++.+
T Consensus 245 GfGRtG~~~a-~~~~gv-----~PD----i~~~gK~l~-~G~~Pi~a~~~-~~~i~~~~~~~~~~~~~~~T~~gnpl~~a 312 (447)
T PRK06917 245 GLGRTGAMFA-MEHWGV-----EPD----IMTLGKGLG-AGYTPIAATVV-SDRVMEPILRGSRSIMSGHTLSANPLSAA 312 (447)
T ss_pred CcCcccchhh-HHhcCC-----CCC----EEEeeehhc-cCCcceEEEEE-cHHHHHHHhccCcccccccCCCCCHHHHH
Confidence 7543343211 111111 122 247799998 785 8999999 56666665421 122345677777
Q ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCCcccc-----cChhhHHHHHH
Q 046900 317 LLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSPLLEE-----QTREGELALWD 387 (442)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~l~~ 387 (442)
++.+.|+... + ....+.+++.-++|.+.|++ .++......-|+++.+++...... ........++.
T Consensus 313 aa~a~l~~l~---~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~ 387 (447)
T PRK06917 313 TALAVLEYME---K--HNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELIS 387 (447)
T ss_pred HHHHHHHHHH---H--CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHH
Confidence 6666665211 1 11223333333444444433 333222334556666666321100 00112456777
Q ss_pred HHHHcCcEEEeCCCC-CCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 388 SMLHEVKLNISPGSS-CHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 388 ~l~~~~gi~v~pg~~-f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.++++ ||++.|+.. ......+.+|++.. .++++++++++++|.+++++..+
T Consensus 388 ~~~~~-Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 388 VAAKN-GLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred HHHhC-CcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 77776 999987421 11112357999876 34999999999999999987643
No 315
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.61 E-value=2.4e-13 Score=131.42 Aligned_cols=265 Identities=15% Similarity=0.122 Sum_probs=165.3
Q ss_pred CCcEEEecChHHHHHHHHHhhc-CCC-CeEEEcCCCCcChHHhHhhhcC-------cE-----EEEEecCCCCCCcCCHH
Q 046900 120 LNRIVVTAGATAANELLTFILA-DPG-DALLVPTPYYPGFDRDLRWRTG-------IK-----IVPIHCDSSNNFQITPQ 185 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~~G-------~~-----v~~v~~~~~~~~~~d~~ 185 (442)
.+.+++++++++|++.+++... .+| +.|+...-+|.+....+....+ .. +..+| | .|++
T Consensus 81 ~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~------~-~d~~ 153 (364)
T PRK04013 81 YEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP------F-NDVE 153 (364)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec------C-CCHH
Confidence 4689999999999999987663 234 7899998888775433221111 11 11121 1 1577
Q ss_pred HHHHHHHHHHhcCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcC
Q 046900 186 ALEAAYKEAESKDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQY 264 (442)
Q Consensus 186 ~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~ 264 (442)
.+++.+.+ ++.+|++.......|.. .+.+-++++.++|++||+++|+||++..+ ..|..+ ....+.
T Consensus 154 ~l~~~i~~------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~-a~~~~g----- 220 (364)
T PRK04013 154 AAKEAITK------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFL-AIEHYK----- 220 (364)
T ss_pred HHHHHhcC------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchh-HHHhcC-----
Confidence 88877753 67777766555555654 45667999999999999999999999876 444321 211111
Q ss_pred CCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Q 046900 265 KDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQ 344 (442)
Q Consensus 265 ~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (442)
..+. +-+++|.+| .|+.+|.++...+ +.. ....+.+..++++.+++.+.|+-.+- +..+++.++.
T Consensus 221 -v~PD---iv~~gK~lg-gG~P~~a~~~~~~-~~~--~~~~~T~~gnp~~~aaa~a~l~~i~~-~~l~~~~~~~------ 285 (364)
T PRK04013 221 -VEPD---IVTMGKGIG-NGVPVSLTLTNFD-VER--GKHGSTFGGNPLACKAVAVTLRILRR-ERLVEKAGEK------ 285 (364)
T ss_pred -CCCC---EEEeccccc-CCceeEEEEeccc-ccC--CCcCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHH------
Confidence 1122 335799998 7899999998433 321 11223345677777776666653210 1112222221
Q ss_pred HHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHH
Q 046900 345 MIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTL 423 (442)
Q Consensus 345 ~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i 423 (442)
+ +.+.. .+-.....-|+++-+++... ...+...++++ |+++.+. +...+|+... .++++++
T Consensus 286 -l-~~l~~-~~v~~vRG~Gl~~gve~~~~--------~~~i~~~~~~~-Gll~~~~------g~~vlr~~Ppl~it~~~i 347 (364)
T PRK04013 286 -F-IEIKG-ERVVTTRGRGLMIGIVLKKP--------VGKYVEELQNR-GYLVHTA------GQRVIRLLPPLIISKDTM 347 (364)
T ss_pred -H-HHhcc-CcceeeeeCcEEEEEEeCCc--------HHHHHHHHHhC-CcEEeeC------CCCEEEEeCCcccCHHHH
Confidence 2 22221 11111234567888888531 44677777776 9998763 2357999886 4589999
Q ss_pred HHHHHHHHHHHHHH
Q 046900 424 EVALKRIHNFMQKR 437 (442)
Q Consensus 424 ~~~l~~l~~~l~~~ 437 (442)
++++++|.+++.+.
T Consensus 348 ~~~~~~l~~~l~~~ 361 (364)
T PRK04013 348 EEAKSAIEGVINDI 361 (364)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999764
No 316
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.61 E-value=1e-12 Score=130.71 Aligned_cols=307 Identities=14% Similarity=0.130 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC-------C-CCeEEEcCCCCcChHHhHhhhcC----
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD-------P-GDALLVPTPYYPGFDRDLRWRTG---- 166 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~~G---- 166 (442)
+....+|+.+.+... -..+.++++++++++++.+++.... + ..+|+...-+|.+....+....|
T Consensus 89 ~~~~~la~~l~~~~p----~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~ 164 (442)
T PRK13360 89 PKAFELANRIAEIAP----GGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPN 164 (442)
T ss_pred HHHHHHHHHHHHhCC----CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhh
Confidence 445566666654321 1235899999999999998775421 1 35788888888775432110011
Q ss_pred --------cEEEEEecCC---CCCCcC--------CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHH
Q 046900 167 --------IKIVPIHCDS---SNNFQI--------TPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELL 226 (442)
Q Consensus 167 --------~~v~~v~~~~---~~~~~~--------d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~ 226 (442)
..+..+|... ...|.. ..+.|++.+... ...++.+|++.......|.+. +.+-+++|.
T Consensus 165 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~fl~~lr 242 (442)
T PRK13360 165 RKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGYLQRLR 242 (442)
T ss_pred hhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHH
Confidence 1122233211 001111 135677776532 113454444443356677764 566699999
Q ss_pred HHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--
Q 046900 227 DFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR-- 303 (442)
Q Consensus 227 ~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~-- 303 (442)
++|++|++++|+||++..+...|..+. .+.. . ..++ +.+|+|.++ .| +.+|.+++ ++.+.+.+..
T Consensus 243 ~lc~~~g~llI~DEv~tG~GrtG~~~a--~~~~-g---v~PD----ivt~gK~l~-gG~~P~gav~~-~~~i~~~~~~~~ 310 (442)
T PRK13360 243 EICDKHGILLIFDEVITGFGRLGAPFA--AQYF-G---VTPD----LLTCAKGLT-NGAIPMGAVFV-SSEIHDAFMQGP 310 (442)
T ss_pred HHHHHcCCEEEEechhhCCCCCccchh--hhhc-C---CCCc----eeeeeeccc-cCccceEEEEE-cHHHHHHhhcCC
Confidence 999999999999999976543343211 1110 0 0122 237899997 67 78999988 5666665532
Q ss_pred -------ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-Ceee--cCCceEEEEEecCCc
Q 046900 304 -------MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECL--KGNAGLFCWMNLSPL 373 (442)
Q Consensus 304 -------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~--~~~~g~~~~~~~~~~ 373 (442)
....+..++++..++.+.|+- +++ ....+..++.-+++.+.|+++. .... ....|++.-+.+...
T Consensus 311 ~~~~~~~~~~T~~g~pl~~aaa~a~L~~---l~~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~ 385 (442)
T PRK13360 311 EAGIEFFHGYTYSGHPLACAAALATLDL---YER--EGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPR 385 (442)
T ss_pred ccccccccCCCCCCCHHHHHHHHHHHHH---HHh--CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecC
Confidence 111234566666666665542 111 1233444444455555555431 1111 122344544555321
Q ss_pred ccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 374 LEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 374 ~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.... ...+.+++..++++ ||++.++ ...+|++.. .++++++++++++|.+++++.
T Consensus 386 ~~~~-~~~~~~~~~~l~~~-Gvl~~~~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 386 DGKP-GKRAYEVFLKCFEK-GLMIRYT-------GDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CCCc-chhHHHHHHHHHHC-CcEEEec-------CCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 1111 11346777888776 9999763 246999965 348999999999999998653
No 317
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.61 E-value=1.7e-12 Score=128.95 Aligned_cols=347 Identities=14% Similarity=0.140 Sum_probs=192.1
Q ss_pred CCCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+.....+||+..+. ..+ ..+.+.+.+.++.... ..+.- ..+....+|+.+.+...
T Consensus 45 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~------------~~~~~---~~~~~~~la~~l~~~~p-- 107 (428)
T PRK12389 45 AYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENG------------VLYGT---PTELEIEFAKMLKEAIP-- 107 (428)
T ss_pred CEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhC------------CccCC---CCHHHHHHHHHHHHhCC--
Confidence 333445567788886553 223 3355555555443210 01111 12445566666654321
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcEEEE--------EecCC-CCCC---c
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIKIVP--------IHCDS-SNNF---Q 181 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~--------v~~~~-~~~~---~ 181 (442)
..+.+++++++++|++.+++.... ....|+...-+|.+....+....|..... ++... .+-. .
T Consensus 108 ---~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (428)
T PRK12389 108 ---SLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF 184 (428)
T ss_pred ---CCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC
Confidence 246899999999999998875422 23678888888877654332112211110 00000 0000 1
Q ss_pred CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHh
Q 046900 182 ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILE 260 (442)
Q Consensus 182 ~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~ 260 (442)
.|++.+++.+.++ +.++.+|++..-....|.+. +.+-+++|.++|++||+++|.||++..+ ..+.. ...+...
T Consensus 185 ~d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~--~a~~~~g 258 (428)
T PRK12389 185 NDIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYG--GAQDLLG 258 (428)
T ss_pred CCHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcc--hhhHHhC
Confidence 2688898888643 23555555554466678765 5666999999999999999999999876 22211 1111110
Q ss_pred hhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-----ccccCCCcHHHHHHHHHHhcCchhHHHHHHHH
Q 046900 261 ARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-----MSSFTLISSQTQYLLASMLSNKKFTENYIKTN 335 (442)
Q Consensus 261 ~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 335 (442)
..++ +-+++|.+| .|+.+|.+++ ++.+.+.+.. ....+..++++.+++.+.|+... + ...
T Consensus 259 ----v~PD----ivt~gK~lg-gG~Pi~av~~-~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~---~--~~l 323 (428)
T PRK12389 259 ----VEPD----LTALGKIIG-GGLPIGAYGG-RKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQ---Q--EGV 323 (428)
T ss_pred ----CCCC----eeeechhhc-CCCceeEEeE-HHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHh---c--ccH
Confidence 0122 247899998 8899999988 5667766642 11224557777666666655211 0 012
Q ss_pred HHHHHHHHHHHHHHHHh----CCCeeec-CCceEEEEEecCCcccc-------cChhhHHHHHHHHHHcCcEEEeCCCCC
Q 046900 336 RERLQKRYQMIIEGLRS----AGIECLK-GNAGLFCWMNLSPLLEE-------QTREGELALWDSMLHEVKLNISPGSSC 403 (442)
Q Consensus 336 ~~~~~~~~~~l~~~L~~----~g~~~~~-~~~g~~~~~~~~~~~~~-------~~~~~~~~l~~~l~~~~gi~v~pg~~f 403 (442)
.+++++.-+++.+.|++ +++.... ..+|++ -+.+...... ........+...++++ ||.+.+..
T Consensus 324 ~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~-- 399 (428)
T PRK12389 324 YEKLDRLGAMLEEGILEAAEKHGITITINRLKGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQ-GINLAPSK-- 399 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHHHC-CcEeecCC--
Confidence 22333333444444432 3432221 233433 2443221000 0111245677777776 99998742
Q ss_pred CCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 404 HCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 404 ~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
.+.+.+++.. ++++++++++++.+++++
T Consensus 400 ----~~~~~~~l~~-t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 400 ----YEAWFLTTAH-TEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred ----CCCeeecCCC-CHHHHHHHHHHHHHHHHh
Confidence 1224566555 899999999999998864
No 318
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.61 E-value=1.6e-12 Score=129.45 Aligned_cols=307 Identities=13% Similarity=0.135 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC-------C-CCeEEEcCCCCcChHHhHhhhcCc---
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD-------P-GDALLVPTPYYPGFDRDLRWRTGI--- 167 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~~G~--- 167 (442)
+....+|+.+.+... ...+.|+++++++++++.+++.... + ..+|+...-+|.+....+....|.
T Consensus 92 ~~~~~la~~L~~~~p----~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~ 167 (445)
T PRK09221 92 PLAFELAERLAELAP----GGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNN 167 (445)
T ss_pred HHHHHHHHHHHHhCC----CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhh
Confidence 344456666654321 1236899999999999998875431 1 257888888887653221100110
Q ss_pred ---------EEEEEecCC---CCCCcC--------CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHH
Q 046900 168 ---------KIVPIHCDS---SNNFQI--------TPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELL 226 (442)
Q Consensus 168 ---------~v~~v~~~~---~~~~~~--------d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~ 226 (442)
.+..+|... ...+.. ..+.+++.++... ..++.+|++..-....|... +.+-+++|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~Epv~g~~G~~~~~~~yl~~l~ 245 (445)
T PRK09221 168 RKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHD--ASTIAAVIVEPMAGSAGVLVPPKGYLQRLR 245 (445)
T ss_pred hhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcC--CCcEEEEEEecccCCCCcccCCHHHHHHHH
Confidence 112222110 000111 1346666665321 13555556554466678765 455699999
Q ss_pred HHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--
Q 046900 227 DFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR-- 303 (442)
Q Consensus 227 ~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~-- 303 (442)
++|++||+++|.||++..+...|..+ ....+.- .++ +.+++|.++ .| +.+|.+++ ++.+.+.+..
T Consensus 246 ~lc~~~g~llI~DEV~tG~GRtG~~~-~~~~~gv-----~PD----i~~~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~~ 313 (445)
T PRK09221 246 EICDKHGILLIFDEVITGFGRLGAAF-AAERFGV-----TPD----IITFAKGLT-NGAIPMGAVIA-SDEIYDAFMQGP 313 (445)
T ss_pred HHHHHcCCEEEEeehhhCCCcCchhh-HHHhcCC-----CCC----EEEeccccc-cCcccceeeEE-cHHHHHhhccCc
Confidence 99999999999999997654334321 1111110 122 347899997 66 67999988 5666665432
Q ss_pred -------ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCee--ecCCceEEEEEecCCc
Q 046900 304 -------MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIEC--LKGNAGLFCWMNLSPL 373 (442)
Q Consensus 304 -------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~~~~g~~~~~~~~~~ 373 (442)
....+..++++..++.+.|+.. ++ ....++.++.-+++.+.|+++ +... ....-|++.-+++...
T Consensus 314 ~~~~~~~~~~T~~~~pl~~aaa~a~L~~i---~~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~ 388 (445)
T PRK09221 314 EYAIEFFHGYTYSAHPVACAAGLATLDIY---RE--EDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPR 388 (445)
T ss_pred ccccccccccCCCcCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecc
Confidence 1112345666665555555421 11 123344555555666666543 2111 1123345555665431
Q ss_pred ccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 374 LEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 374 ~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.... ......+.+.++++ ||.+.++ ...+|++.. .++++++++++++|.+++.+.
T Consensus 389 ~~~~-~~~~~~~~~~~~~~-Gv~~~~~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 389 PGAP-GARGYEAFMKCFEK-GLLVRYT-------GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred cccc-cchHHHHHHHHHHC-CeEEeec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 1100 01245677888776 9999763 246999865 448999999999999998753
No 319
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.61 E-value=2.2e-12 Score=123.80 Aligned_cols=348 Identities=14% Similarity=0.190 Sum_probs=216.5
Q ss_pred ceeeeeccccc-ccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 49 GVIQMGLAENQ-VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 49 ~~i~l~~~~n~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
=+|||-+..-. .|.+.....+... -..|.....+..|.+++++.++ .+.++.|.
T Consensus 42 V~IDLrSDTgT~apS~~m~aAM~~G---------------DD~Y~gdpSv~~Lee~vael~G----------~E~alpth 96 (467)
T TIGR02617 42 VFIDLLTDSGTGAVTQSMQAAMMRG---------------DEAYSGSRSYYALAESVKNIFG----------YQYTIPTH 96 (467)
T ss_pred eEEECccCCCCCCCCHHHHHHHHcC---------------CcccccCchHHHHHHHHHHHhC----------CceEEECC
Confidence 34888766544 2444444444431 1347766778899999999886 44578887
Q ss_pred ChHHHHHHHHHhhcC-CCCeEEEcCC-------C-CcChHHhHhhhcCcEEEEEecCC------CC--CCcCCHHHHHHH
Q 046900 128 GATAANELLTFILAD-PGDALLVPTP-------Y-YPGFDRDLRWRTGIKIVPIHCDS------SN--NFQITPQALEAA 190 (442)
Q Consensus 128 G~~~ai~~~~~~l~~-~gd~Vl~~~p-------~-y~~~~~~~~~~~G~~v~~v~~~~------~~--~~~~d~~~l~~~ 190 (442)
.+..+-.+++..+++ +||.+++..+ . |......+. ..|+.++.++.++ .+ +-.+|++.|++.
T Consensus 97 qGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~-l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~ 175 (467)
T TIGR02617 97 QGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQ-INGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERG 175 (467)
T ss_pred CCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHH-HcCceeecccchhhcccccCCCCCCCcCHHHHHHH
Confidence 778999999999988 7887776553 1 221223344 3788887764331 11 235899999999
Q ss_pred HHHHHhcCCceeEEEEeCCCCC-CCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc-CCC------CCCCcccHHHHHhhh
Q 046900 191 YKEAESKDMRVRGVLITNPSNP-LGATIQRSVLEELLDFATRKNIHLVSDEIYSG-SAF------SSSEFVSIAEILEAR 262 (442)
Q Consensus 191 l~~~~~~~~~~~~v~l~~P~NP-tG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~-~~~------~~~~~~s~~~~~~~~ 262 (442)
|++... .++..+...--+|- -|+++|.+.++++.++|++||+.++.|.+-.. ..+ .+..-.|+.++..++
T Consensus 176 I~~~g~--~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~ 253 (467)
T TIGR02617 176 IEEVGP--NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRET 253 (467)
T ss_pred HhhcCC--CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHh
Confidence 986311 12222222212343 58899999999999999999999999987321 011 011234666654321
Q ss_pred cCCCCCcEEEEecCcccCCCC-CceeEEEeecCH---HHHHHHHH-------ccccCCCcHHHHHHHHHHhcCchhHHHH
Q 046900 263 QYKDSERVHIVYSLSKDLGLP-GFRVGTIYSYND---KVVTTARR-------MSSFTLISSQTQYLLASMLSNKKFTENY 331 (442)
Q Consensus 263 ~~~~~~~vi~~~S~SK~~g~~-G~RiG~i~~~~~---~~~~~~~~-------~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 331 (442)
. .+-. .+.-|+||.+|.| | |+++++++ .+.+.++. +.++++++.-...+++.-|... ...++
T Consensus 254 ~--~~aD-svt~slsKglgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~-~~~~y 326 (467)
T TIGR02617 254 Y--KYAD-MLAMSAKKDAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDG-MNLDW 326 (467)
T ss_pred h--ccCC-EEEEEcCCCCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhc-ccHHH
Confidence 0 0112 3456999999866 4 67777776 33344333 3344566665566665555543 22445
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCccccc--ChhhHHHHHHHHHHcCcEEEe-CCCCCCCC--
Q 046900 332 IKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQ--TREGELALWDSMLHEVKLNIS-PGSSCHCS-- 406 (442)
Q Consensus 332 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~gi~v~-pg~~f~~~-- 406 (442)
+.....+ -++|.+.|.+.|+.+.. .||.-++++....+..- ....+..++.+|..+.||--. -|+.....
T Consensus 327 l~~ri~q----v~yl~~~L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~ 401 (467)
T TIGR02617 327 LAYRINQ----VQYLVNGLEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDP 401 (467)
T ss_pred HHHHHHH----HHHHHHHHHhCCCcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCC
Confidence 5544443 36888999999999988 88878888754432211 112478889999888898733 33331110
Q ss_pred ------C--CCEEEEEee--cCCHHHHHHHHHHHHHHHHH
Q 046900 407 ------E--PGWFRVCFA--NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 407 ------~--~~~iRls~~--~~~~e~i~~~l~~l~~~l~~ 436 (442)
. -..+||++. .-+.+.++-..++|..+.++
T Consensus 402 ~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 402 KTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred CCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 0 146999986 22788899999988887664
No 320
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=1.4e-12 Score=130.26 Aligned_cols=311 Identities=12% Similarity=0.076 Sum_probs=177.8
Q ss_pred HHHHHHHHHHHHHhCCCC-ccCCCcEEEecChHHHHHHHHHhhcC-------C-CCeEEEcCCCCcChHHhHhhhcCc--
Q 046900 99 SFRQAMASFMEQIRGGRA-KFDLNRIVVTAGATAANELLTFILAD-------P-GDALLVPTPYYPGFDRDLRWRTGI-- 167 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~-~~~~~~i~~t~G~~~ai~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~~G~-- 167 (442)
+.+..+|+.+.+...... .-..+.+++++++++|++.+++.... + ..+|+...-+|.+....+....|.
T Consensus 107 ~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~ 186 (472)
T PRK08742 107 EPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPL 186 (472)
T ss_pred HHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcc
Confidence 445567776665421000 00235899999999999998876521 2 357888888887765332211121
Q ss_pred ----------EEEEEecCCCC--CCcC--------CHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCCcC-CCHHHHHHH
Q 046900 168 ----------KIVPIHCDSSN--NFQI--------TPQALEAAYKEAESKDMRVRGVLITN-PSNPLGAT-IQRSVLEEL 225 (442)
Q Consensus 168 ----------~v~~v~~~~~~--~~~~--------d~~~l~~~l~~~~~~~~~~~~v~l~~-P~NPtG~~-~~~~~l~~l 225 (442)
.+..+|..... .+.. +++.+++.+.+ ...++.+|++.. ..+-.|.+ .+.+-++++
T Consensus 187 ~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p~~fl~~l 263 (472)
T PRK08742 187 YRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHHPAYLRRA 263 (472)
T ss_pred cccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCCHHHHHHH
Confidence 11222221100 0111 24556666642 223565555543 25666764 566779999
Q ss_pred HHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc-eeEEEeecCHHHHHHHHH-
Q 046900 226 LDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARR- 303 (442)
Q Consensus 226 ~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~-RiG~i~~~~~~~~~~~~~- 303 (442)
.++|++||+++|.||+...|...|..+. ...+.- .+.+ -+++|.+| .|+ .+|.+++ ++++.+.+..
T Consensus 264 r~lc~~~gillI~DEV~TGfGRtG~~~a-~e~~gv------~PDi---v~~gKgl~-gG~~Plaav~~-~~ei~~~~~~~ 331 (472)
T PRK08742 264 RELCDAHGAFLIADEIATGFGRTGTLFA-CEQAGV------MPDL---LCLSKGLT-GGFLPLSAVLA-TQQLYDAFLDD 331 (472)
T ss_pred HHHHHHcCCEEEEechhhCCCCCccchH-HHhcCC------CCCE---EEEccccc-CCCCCcceeec-cHHHHHHhhcc
Confidence 9999999999999999988755554221 111111 1222 35699998 884 8999998 5666665532
Q ss_pred -------ccccCCCcHHHHHHHHHHhcC---chhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCc
Q 046900 304 -------MSSFTLISSQTQYLLASMLSN---KKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPL 373 (442)
Q Consensus 304 -------~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~ 373 (442)
....+..++++-+++.+.|+- .+. .+...++-+.+ ..+.+.+.++.+-.....-|+++-+++...
T Consensus 332 ~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l-~~~~~~~g~~l----~~~~~~~~~~~~i~dvRG~Gl~~giel~~~ 406 (472)
T PRK08742 332 SRERAFLHSHSYTGNPLACAAALATLDIFADDDV-IARNQPTAARM----TQLAAQIGEHPHVADVRQAGMVVAFELTRG 406 (472)
T ss_pred CccCccCcCCCCCccHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHH----HHHHHHHhcCCCeeeEeccceEEEEEeccC
Confidence 122344567776666666552 221 12222222222 223333444432222234566777777432
Q ss_pred cccc-C--h--hhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 374 LEEQ-T--R--EGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 374 ~~~~-~--~--~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.... . . .-...+.+.++++ ||++.+. .+.||+... .++++++++++++|.+++++.
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~-------g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 407 GNKRTPFPPAARVGLHAYRAALAR-GVVLRPL-------GDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred ccccccCCchhHHHHHHHHHHHHC-CeEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1111 0 0 1124567777776 9999862 146999886 558999999999999999864
No 321
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=1.3e-12 Score=129.43 Aligned_cols=347 Identities=11% Similarity=0.045 Sum_probs=195.1
Q ss_pred CCCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+...+..||+..+- ..+ ..+.+.+.+.++.... ..+....-..+.+..+|+.+.....
T Consensus 36 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~------------~~~~~~~~~~~~~~~lae~L~~~~p-- 101 (429)
T PRK06173 36 VMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKM------------SHIMFGGFTHEPAVELAQKLLEILP-- 101 (429)
T ss_pred eEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhc------------CCccccccCCHHHHHHHHHHHhhCC--
Confidence 334455567788886542 222 3355555554443210 0000000012344455555554321
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhcC-------C-CCeEEEcCCCCcChHHhHhhhcCc-------------EEEEEec
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILAD-------P-GDALLVPTPYYPGFDRDLRWRTGI-------------KIVPIHC 174 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~~G~-------------~v~~v~~ 174 (442)
-..+.+++++++++|++.+++.... + ..+|+...-+|.+.........|- .+..+|.
T Consensus 102 --~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~ 179 (429)
T PRK06173 102 --PSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQ 179 (429)
T ss_pred --CCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCC
Confidence 1246899999999999998776431 2 357888888887742111100110 0112221
Q ss_pred CCCCCCc-----CCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCC
Q 046900 175 DSSNNFQ-----ITPQALEAAYKEAESKDMRVRGVLITNP-SNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAF 247 (442)
Q Consensus 175 ~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~ 247 (442)
... .+. -+++.|++.+.+ .+.++.++++..- +.-.|.. .+.+-+++|.++|++||+++|+||++..+..
T Consensus 180 p~~-~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~Gr 255 (429)
T PRK06173 180 PSI-KFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGR 255 (429)
T ss_pred CCc-ccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCc
Confidence 100 010 135556666653 2345666666542 5666766 5777799999999999999999999976433
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH-------ccccCCCcHHHHHHHH
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR-------MSSFTLISSQTQYLLA 319 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~-------~~~~~~~s~~~q~~~~ 319 (442)
.|..+ ......- .++ |+ +|+|+++ .| +.+|.+++ ++++.+.+.. ..+.+..++++.+++.
T Consensus 256 tG~~~-a~~~~gv-----~PD--iv--~~gK~l~-gG~~p~~a~~~-~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~ 323 (429)
T PRK06173 256 TGKLF-ALEHAGV-----VPD--IM--CIGKALT-GGYLTLSATIT-TEAIAQTICSGEAKCFMHGPTFMANPLACAIAA 323 (429)
T ss_pred CCcch-HHHhcCC-----CCC--EE--Eeehhhh-CCccccceEEe-cHHHHHHHhcCCCCccccCCCCCcCHHHHHHHH
Confidence 33321 1111110 122 32 4899997 78 47888888 5666666532 1122345666666666
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec--CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEE
Q 046900 320 SMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK--GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLN 396 (442)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~ 396 (442)
+.|+- +++ ...++.++++-+++.+.|++. +..... -..|+++-+.+.... ....+.+.|+++ ||.
T Consensus 324 a~l~~---i~~--~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~------~~~~i~~~l~e~-Gi~ 391 (429)
T PRK06173 324 ESIRL---LLE--SPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV------NMATLQPRFVEH-GIW 391 (429)
T ss_pred HHHHH---HHh--CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc------cHHHHHHHHHHC-CeE
Confidence 55542 111 123444555555666666543 333221 134567767775421 245677788776 999
Q ss_pred EeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 397 ISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 397 v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+.+. + ..+|+... .++++++++++++|.+++.+.
T Consensus 392 v~~~------g-~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 392 VRPF------G-KLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred EEec------C-CEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 9773 1 37999887 558999999999999998763
No 322
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.60 E-value=1.9e-12 Score=138.02 Aligned_cols=346 Identities=14% Similarity=0.143 Sum_probs=204.2
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCC---CcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQD---YHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
..+|.|+.....+.+......+.. + ++...+-|.+ .+|+.++...+.+++.+..| .+++-
T Consensus 499 ~~~i~lGsct~~~~p~~~~~~~~~-~----------~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG------~d~~s 561 (954)
T PRK05367 499 RSMIPLGSCTMKLNAAAEMIPITW-P----------EFANLHPFAPAEQAAGYRELIDQLEAWLAEITG------YDAVS 561 (954)
T ss_pred cceeeCCcCCCcCCHHHHHHHHhC-c----------cccccCCCChHHHHHHHHHHHHHHHHHHHHHHC------CCCEE
Confidence 456778876666554333332222 1 1222344544 25788999999999998877 23455
Q ss_pred Eec-ChHHHHHH---HHHhh-cCCCC----eEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 125 VTA-GATAANEL---LTFIL-ADPGD----ALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 125 ~t~-G~~~ai~~---~~~~l-~~~gd----~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
+.. |++++... +++.+ .++|+ +|+++.-.|......+.. .|++++.++++.++ .+|+++|++.+.+.
T Consensus 562 l~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~-~G~~vv~v~~d~~G--~iD~~~L~~~i~~~- 637 (954)
T PRK05367 562 LQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVM-AGMKVVVVACDENG--NIDLDDLRAKAEEH- 637 (954)
T ss_pred ECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHH-CCCEEEEECCCCCC--CcCHHHHHHHHhcc-
Confidence 555 45554433 23332 34565 699999999888777874 89999999987644 68999999998652
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEec
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYS 275 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S 275 (442)
+.++.+|++++|++-.+...+ +++|+++|+++|+++++|.++...... +.+...+ +--++..|
T Consensus 638 --~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~al~~---l~~pg~~---------GADi~~~s 700 (954)
T PRK05367 638 --ADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMNAQVG---LARPGDI---------GADVSHLN 700 (954)
T ss_pred --CCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhhccC---CCChhhc---------CCCEEEec
Confidence 225778888998876443445 889999999999999999999632221 1122222 22367789
Q ss_pred CcccCC----CCCceeEEEeecCHHHHHHHHHcc--------ccCCCc--HHHHHHH----HHHhcCchhHHHHHHHHHH
Q 046900 276 LSKDLG----LPGFRVGTIYSYNDKVVTTARRMS--------SFTLIS--SQTQYLL----ASMLSNKKFTENYIKTNRE 337 (442)
Q Consensus 276 ~SK~~g----~~G~RiG~i~~~~~~~~~~~~~~~--------~~~~~s--~~~q~~~----~~~l~~~~~~~~~~~~~~~ 337 (442)
++|+|+ ..|-.+|++.+. +.+...+.... ..+.++ ...|..+ ..++...+ .+.+++..+
T Consensus 701 ~HK~f~~P~G~GGPg~G~l~vr-~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G--~~Glr~~a~ 777 (954)
T PRK05367 701 LHKTFCIPHGGGGPGVGPIGVK-AHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMG--AEGLRQATE 777 (954)
T ss_pred CcccCCCCcCCCCCceEEEeec-ccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHC--HHHHHHHHH
Confidence 999974 234447888873 33332221100 011122 2222211 11121111 233455555
Q ss_pred HHHHHHHHHHHHHHhC-CCeeecCCceEE--EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEE
Q 046900 338 RLQKRYQMIIEGLRSA-GIECLKGNAGLF--CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVC 414 (442)
Q Consensus 338 ~~~~~~~~l~~~L~~~-g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls 414 (442)
..-.+.+++.+.|.+. .+.+..+.+..+ +.++++......+ ....++.++|.+. |+.... ..|. ..+.+||+
T Consensus 778 ~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g-~~~~di~krL~d~-G~~~~t-~~~p--v~~~l~i~ 852 (954)
T PRK05367 778 VAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTG-ITVDDIAKRLIDY-GFHAPT-MSFP--VAGTLMVE 852 (954)
T ss_pred HHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCC-CCHHHHHHHHHHC-CCeEee-cCCc--cCCEEEEE
Confidence 5556778888888663 333332221111 2223322111101 1357888998555 998654 3343 36778888
Q ss_pred ee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 415 FA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 415 ~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+. .-++++++++++.|+++..+...
T Consensus 853 ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 853 PTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred eeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 76 22899999999999988776543
No 323
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.60 E-value=1.3e-14 Score=140.00 Aligned_cols=182 Identities=23% Similarity=0.325 Sum_probs=123.1
Q ss_pred CCcc-hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEE
Q 046900 93 DYHG-LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVP 171 (442)
Q Consensus 93 ~~~g-~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~ 171 (442)
.+.| ..+..+..|+.++ .....+++||+|.++..++.+++++||.|+++..+|.+...++.+ .|+++++
T Consensus 63 ~p~G~I~eAe~~aA~~fG---------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil-~ga~Pvy 132 (417)
T PF01276_consen 63 DPEGIIKEAEELAARAFG---------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALIL-SGAIPVY 132 (417)
T ss_dssp TTBTHHHHHHHHHHHHHT---------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHH-HTEEEEE
T ss_pred CCccHHHHHHHHHHHhcC---------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHH-cCCeEEE
Confidence 4445 4566666666665 244689999999999999999999999999999999999998885 8999999
Q ss_pred EecCCCCCC----cCCH-----HHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccC
Q 046900 172 IHCDSSNNF----QITP-----QALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242 (442)
Q Consensus 172 v~~~~~~~~----~~d~-----~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y 242 (442)
++.. .+.+ .+++ +.+++++++..... .++++++++|+. -|.+++ +++|+++|.++++.|++||+|
T Consensus 133 i~p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k-~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAh 206 (417)
T PF01276_consen 133 IPPE-DNEYGIIGGISPDEFNEEDIEEALKEHPDAK-APRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAH 206 (417)
T ss_dssp EEEE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCH-CESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT
T ss_pred ecCC-ccccCCccCCChhhhhHHHHHHHHHhCcccc-CceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccc
Confidence 9765 3333 2455 89999998753211 145599999987 688888 888999999999999999998
Q ss_pred CcC-CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce-eEEEeecCH
Q 046900 243 SGS-AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR-VGTIYSYND 295 (442)
Q Consensus 243 ~~~-~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R-iG~i~~~~~ 295 (442)
+.. .|. +-+.+...+..+ ......++++.|.+|.+ +++. .+++.....
T Consensus 207 Gah~~F~-~lp~~a~~~gad--~~~~~~~~vvqS~HKtL--~altQts~lh~~~~ 256 (417)
T PF01276_consen 207 GAHFGFH-PLPRSALALGAD--RPNDPGIIVVQSTHKTL--PALTQTSMLHVKGD 256 (417)
T ss_dssp -TTGGCS-GGGTTCSSTTSS---CTSBEEEEEEEHHHHS--SS-TT-EEEEEETC
T ss_pred cccccCC-CCccchhhccCc--cccccceeeeechhhcc--cccccceEEEecCC
Confidence 852 232 111111111111 01235678899999998 4443 456665433
No 324
>PRK06062 hypothetical protein; Provisional
Probab=99.60 E-value=1.1e-12 Score=130.75 Aligned_cols=356 Identities=14% Similarity=0.122 Sum_probs=194.6
Q ss_pred CCCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+...+.+||+..+. ..+ .++.+.+.+.+..... ..+... -..+.+..+|+.+.+...
T Consensus 45 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~------------~~~~~~-~~~~~~~~lae~L~~~~p-- 109 (451)
T PRK06062 45 SYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARL------------CTVAPA-HANDARSEAARLIAERAP-- 109 (451)
T ss_pred eEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhc------------CCcCCc-cCCHHHHHHHHHHHHhCC--
Confidence 334455667888986543 323 2344444444433210 111111 123455566666665321
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCc-----------EEEEEecCCC--CCC
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGI-----------KIVPIHCDSS--NNF 180 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~-----------~v~~v~~~~~--~~~ 180 (442)
-..+.|++++++++|++.+++... ....+|+...-+|.+....+....|. .+..++.... ..|
T Consensus 110 --~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 187 (451)
T PRK06062 110 --GDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEF 187 (451)
T ss_pred --CCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCcccccc
Confidence 123689999999999999887642 23357888888887765332211221 1122221110 011
Q ss_pred c--CC-------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 181 Q--IT-------PQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 181 ~--~d-------~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
. -| ++.+++.++.. ...++.+|++..-....|.+. +.+-+++|.++|++||+++|.||++..|...|.
T Consensus 188 ~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~ 265 (451)
T PRK06062 188 HATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGK 265 (451)
T ss_pred CCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcH
Confidence 0 12 56677776531 113455555543355567765 566699999999999999999999987533332
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc-eeEEEeecCHHHHHHHHHc----cccCCCcHHHHHHHHHHhcCc
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARRM----SSFTLISSQTQYLLASMLSNK 325 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~-RiG~i~~~~~~~~~~~~~~----~~~~~~s~~~q~~~~~~l~~~ 325 (442)
.+ ....+.- .++ +.+|+|.+| .|+ .+|.+++ .+.+.+.+... ...+..++++.+++.+.|+..
T Consensus 266 ~~-a~~~~gv-----~PD----i~t~gK~lg-gG~~Pigav~~-~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l 333 (451)
T PRK06062 266 WF-AIEHFGV-----VPD----LITFAKGVN-SGYVPLGGVAI-SEAIAATFADRPYPGGLTYSGHPLACAAAVATINAM 333 (451)
T ss_pred HH-HHHhcCC-----CCC----eeeechhhh-cCCcCcEEEEE-cHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 11 1111110 122 347899998 784 8999998 45677666421 112445677666666666421
Q ss_pred hhHHHHHHHHHHHHHHHH-HHHHHHHHh----CCCeeecCCceEEEEEecCCccccc----C----hhhHHHHHHHHHHc
Q 046900 326 KFTENYIKTNRERLQKRY-QMIIEGLRS----AGIECLKGNAGLFCWMNLSPLLEEQ----T----REGELALWDSMLHE 392 (442)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~-~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~~~----~----~~~~~~l~~~l~~~ 392 (442)
. ++ ...+..++.- +++.+.|++ .+.......-|+++-+++....... . ......+...++++
T Consensus 334 ~--~~---~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 408 (451)
T PRK06062 334 E--EE---GIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKER 408 (451)
T ss_pred H--hc---CHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHC
Confidence 1 10 1222222222 233333333 2321122234556666653211000 0 01245677777776
Q ss_pred CcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 393 VKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 393 ~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
||++.+. .+.+|++.. .+++++++++++++.++++....
T Consensus 409 -Gvl~~~~-------~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 409 -GLLPFVN-------GNRIHVVPPCTVTEDEVREGLAILDAALAVADA 448 (451)
T ss_pred -CcEEeec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 9998652 246899875 34999999999999999987643
No 325
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.59 E-value=1.8e-12 Score=128.22 Aligned_cols=341 Identities=12% Similarity=0.069 Sum_probs=193.7
Q ss_pred CCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCC-cchHHHHHHHHHHHHHHhCCCCcc
Q 046900 44 STNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDY-HGLKSFRQAMASFMEQIRGGRAKF 118 (442)
Q Consensus 44 ~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~ 118 (442)
+...+.+||+..+- +.+ .++.+.+.+.++.... .|... .-..+.+..+|+.+.+... .
T Consensus 39 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~-------------~~~~~~~~~~~~~~~la~~L~~~~p----~ 101 (428)
T PRK07986 39 LADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAM-------------SHVMFGGITHPPAIELCRKLVAMTP----Q 101 (428)
T ss_pred eCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhc-------------CCccccccCCHHHHHHHHHHHhhCC----C
Confidence 44566788886542 333 3355555555443211 01000 0123455666776665321 1
Q ss_pred CCCcEEEecChHHHHHHHHHhhcC-------CCCeEEEcCCCCcChHHhHhhhcCc-------------EEEEEecCCCC
Q 046900 119 DLNRIVVTAGATAANELLTFILAD-------PGDALLVPTPYYPGFDRDLRWRTGI-------------KIVPIHCDSSN 178 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~-------~gd~Vl~~~p~y~~~~~~~~~~~G~-------------~v~~v~~~~~~ 178 (442)
..+.+++++++++|++.+++.... ...+|+...-+|.+....+....+- .++.+|.....
T Consensus 102 ~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 181 (428)
T PRK07986 102 PLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSR 181 (428)
T ss_pred CcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcc
Confidence 236899999999999998875431 2367888888887643221101121 11122211000
Q ss_pred ---CC-cCCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 179 ---NF-QITPQALEAAYKEAESKDMRVRGVLITNP-SNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 179 ---~~-~~d~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
.| .-|.+.+++.+++. +.++.+|++... +.-.|.. .+.+-+++|.++|++|++++|+||++..+...|..+
T Consensus 182 ~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~f 258 (428)
T PRK07986 182 FDGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLF 258 (428)
T ss_pred cchhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCee
Confidence 01 12456777777532 234555555432 4445654 466789999999999999999999997653344322
Q ss_pred cc-HHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHc-------cccCCCcHHHHHHHHHHhc
Q 046900 253 VS-IAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRM-------SSFTLISSQTQYLLASMLS 323 (442)
Q Consensus 253 ~s-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~-------~~~~~~s~~~q~~~~~~l~ 323 (442)
.. ...+. ++ ++ +++|+++ .| +.+|.+++ .+.+.+.+... ...+..++++.+++.+.|+
T Consensus 259 a~~~~gv~-------PD--i~--t~gK~l~-gG~~p~~av~~-~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~ 325 (428)
T PRK07986 259 ACEHAGIA-------PD--IL--CLGKALT-GGTMTLSATLT-TREVAETISNGEAGCFMHGPTFMGNPLACAVANASLS 325 (428)
T ss_pred eecccCCC-------CC--EE--Eechhhh-CCcccCcchhc-hHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence 11 11111 12 22 5899997 78 58888888 56677666431 1223456666666666555
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee--cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCC
Q 046900 324 NKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECL--KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPG 400 (442)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg 400 (442)
.. ++ ....+..+++-+++.+.|+++ ..... .-..|+++-+.+.... ....+...++++ ||.+.+.
T Consensus 326 ~i---~~--~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~------~~~~~~~~l~~~-Gl~~~~~ 393 (428)
T PRK07986 326 LL---ES--GDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPV------NMAALQRFFVEQ-GVWIRPF 393 (428)
T ss_pred HH---Hh--CCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcc------cHHHHHHHHHHC-CcEEEec
Confidence 21 11 012334444444555555443 11111 1234566667765421 245677787776 9999873
Q ss_pred CCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 401 SSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 401 ~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
...+|+... .++++++++++++|.+++.+
T Consensus 394 -------g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 394 -------GKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 146999766 45999999999999999865
No 326
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.59 E-value=1.8e-12 Score=130.38 Aligned_cols=318 Identities=14% Similarity=0.179 Sum_probs=190.6
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCC--------cc-CCCcEEEecChHHHHHHHHHhhcC-------------------
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRA--------KF-DLNRIVVTAGATAANELLTFILAD------------------- 142 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~--------~~-~~~~i~~t~G~~~ai~~~~~~l~~------------------- 142 (442)
|.......++.+.+.+|+.+..+... .. +...-++|+|+|+++..++.+-.+
T Consensus 121 ~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~ 200 (522)
T TIGR03799 121 IETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFA 200 (522)
T ss_pred eecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchh
Confidence 33445668999999999998753100 00 112367899999988876544211
Q ss_pred -------CCCeEEEcCCCCcChHHhHhhhcCc---EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCC
Q 046900 143 -------PGDALLVPTPYYPGFDRDLRWRTGI---KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNP 212 (442)
Q Consensus 143 -------~gd~Vl~~~p~y~~~~~~~~~~~G~---~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NP 212 (442)
++..|++..-.|..+..++.. .|+ +++.+|.++ ++.+|++.|++.+++...++.++-+|+-+..++.
T Consensus 201 ~~~~~~~~~~~v~~S~~~H~S~~kaa~~-lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~ 277 (522)
T TIGR03799 201 ALKHYGYDGLAILVSERGHYSLGKAADV-LGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTE 277 (522)
T ss_pred hhhhccCCceEEEECCCchHHHHHHHHH-cCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcC
Confidence 234688888889999888885 787 789999876 4579999999999865444433333344456779
Q ss_pred CCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEee
Q 046900 213 LGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYS 292 (442)
Q Consensus 213 tG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~ 292 (442)
||.+-| +++|+++|+++|+++++|.+|+....-.. ....+... ...--.+..|.+|.++ ....+|.++.
T Consensus 278 tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~---~~r~~l~g----le~aDSit~d~HK~l~-~P~g~G~llv 346 (522)
T TIGR03799 278 TGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSN---TYRHLLKG----IERADSVTIDAHKQLY-VPMGAGMVLF 346 (522)
T ss_pred CCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCH---HHHHHhcC----chhCCEEEEChhhcCC-cCcccEEEEE
Confidence 999988 78888999999999999999985332111 11111111 0011245679999764 4466899988
Q ss_pred cCHHHHHHHHHcccc-------------CCCcH----HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 046900 293 YNDKVVTTARRMSSF-------------TLISS----QTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-G 354 (442)
Q Consensus 293 ~~~~~~~~~~~~~~~-------------~~~s~----~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 354 (442)
.++...+.+.....+ ...+. +...++...+.. .-++++.++..+..+++.+.|++. +
T Consensus 347 r~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~-----~G~~~ii~~~~~la~~l~~~L~~~~~ 421 (522)
T TIGR03799 347 KDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGR-----KGYELLIDQSIEKAKYFADLIQQQPD 421 (522)
T ss_pred eCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 665554443321111 01111 122233333332 335667777788888999999876 8
Q ss_pred CeeecC-CceEEEEEec-CCccccc----C-------hh--h--HHHHHHHHHHcCcEEEeC-C----CCCCCCCCCEEE
Q 046900 355 IECLKG-NAGLFCWMNL-SPLLEEQ----T-------RE--G--ELALWDSMLHEVKLNISP-G----SSCHCSEPGWFR 412 (442)
Q Consensus 355 ~~~~~~-~~g~~~~~~~-~~~~~~~----~-------~~--~--~~~l~~~l~~~~gi~v~p-g----~~f~~~~~~~iR 412 (442)
+++..+ .-+..+ +++ |...... . .. + ...+.+++.+. |..... . ..+...+...+|
T Consensus 422 ~el~~~p~l~iv~-Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~-G~~~vs~t~l~~~~~~g~~~~~lR 499 (522)
T TIGR03799 422 FELVTEPELCLLT-YRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREA-GKSFVSRTRLTPAQYDHQPTVVFR 499 (522)
T ss_pred eEEecCCCccEEE-EEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhc-CCEEEEEEEecccccCCCCcEEEE
Confidence 887664 444333 343 3221100 0 00 0 13555566555 544332 2 112112234699
Q ss_pred EEeecC--CHHHHHHHHHH
Q 046900 413 VCFANM--SEQTLEVALKR 429 (442)
Q Consensus 413 ls~~~~--~~e~i~~~l~~ 429 (442)
+++.+. ++++++..++.
T Consensus 500 ~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 500 VVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEecCCCCCHHHHHHHHHH
Confidence 999743 67777776553
No 327
>PRK06105 aminotransferase; Provisional
Probab=99.59 E-value=2e-12 Score=129.35 Aligned_cols=355 Identities=13% Similarity=0.087 Sum_probs=194.7
Q ss_pred CCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCcc
Q 046900 43 ESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKF 118 (442)
Q Consensus 43 ~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~ 118 (442)
-+.....+||+..+. ..+ .++.+.+.+.+...... -.... .....+.+..+|+.+.+... -
T Consensus 43 ~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~---------~~~~~--~~~~~~~~~~lae~L~~~~p----~ 107 (460)
T PRK06105 43 YDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLP---------FYHTF--SHKSHGPVIDLAEKLVAMAP----V 107 (460)
T ss_pred EECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCC---------Ceecc--cccCCHHHHHHHHHHHHhCC----C
Confidence 345567789987653 333 33555555444432100 00011 01123445556666665421 1
Q ss_pred CCCcEEEecChHHHHHHHHHhhc------C-C-CCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCCCC
Q 046900 119 DLNRIVVTAGATAANELLTFILA------D-P-GDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDSSN 178 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~~~ 178 (442)
.-+.+++++++++|++.+++... . + ...|+...-+|.+.........|. .+..+|.....
T Consensus 108 ~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~ 187 (460)
T PRK06105 108 PMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYY 187 (460)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCccc
Confidence 23689999999999999988742 1 2 357887777776654322101111 11112211100
Q ss_pred CCc-----------CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 179 NFQ-----------ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 179 ~~~-----------~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
.+. ...+++++.+... ...++.+|++..-....|.. .+.+-+++|.++|++||+++|.||++..+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~G 265 (460)
T PRK06105 188 RFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFG 265 (460)
T ss_pred ccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCC
Confidence 000 0135566666421 11345555554335566765 467779999999999999999999997764
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHc---------cccCCCcHHHHH
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRM---------SSFTLISSQTQY 316 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~---------~~~~~~s~~~q~ 316 (442)
..|..+ ....+.- .+| +.+++|.++ .| +.+|.+++ ++.+.+.+... ...+..++++..
T Consensus 266 RtG~~f-~~~~~~v-----~PD----i~~~gK~lg-gG~~P~~av~~-~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~a 333 (460)
T PRK06105 266 RTGNMF-GCETFGI-----KPD----ILVMSKQLS-SSYQPLSAVLM-NEKVYDPIADESGKIGTFGHGFTASGHPVAAA 333 (460)
T ss_pred cCchhh-hHHhcCC-----CCC----eeeeecccc-cCcccceEEEE-cHHHHHHHhcccccCcccccCCCCCCCHHHHH
Confidence 444322 1111111 122 347899998 66 58999999 56666665431 123455677766
Q ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh---CCCeeecCCceEEEEEecCCcccc-cC----hhhHHHHHHH
Q 046900 317 LLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS---AGIECLKGNAGLFCWMNLSPLLEE-QT----REGELALWDS 388 (442)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~g~~~~~~~~g~~~~~~~~~~~~~-~~----~~~~~~l~~~ 388 (442)
++.+.|+-. ++ ....+..++.-++|.+.|++ +.+-.....-|+++-+++...... .. ...+..+...
T Consensus 334 aa~a~L~~i---~~--~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~ 408 (460)
T PRK06105 334 VALENLAII---EE--RDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAA 408 (460)
T ss_pred HHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHH
Confidence 665555421 11 11223333334444444433 332222234456666666321110 00 0113567777
Q ss_pred HHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 389 MLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 389 l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
++++ ||++.+. ...+|++.. .+++++++++++++.+++++...
T Consensus 409 ~~~~-Gvl~~~~-------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 409 AHEH-GVISRAM-------GDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred HHHC-CeEEEec-------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 7766 9999873 136999876 35899999999999999987643
No 328
>PRK07481 hypothetical protein; Provisional
Probab=99.58 E-value=4e-12 Score=126.86 Aligned_cols=312 Identities=12% Similarity=0.092 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC-------CC-CeEEEcCCCCcChHHhHhhhcCc--
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD-------PG-DALLVPTPYYPGFDRDLRWRTGI-- 167 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~~G~-- 167 (442)
.+.+..+|+.+.+..+ +-..+.+++++++++|++.+++.... +| .+|+...-+|.+....+....|-
T Consensus 85 ~~~~~~lae~L~~~~~---~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~ 161 (449)
T PRK07481 85 HPRAIELSYELIDMFA---PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTV 161 (449)
T ss_pred CHHHHHHHHHHHHhcC---CCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcc
Confidence 3555566666665421 01235899999999999998876431 23 57888888887754322111111
Q ss_pred ----------EEEEEecCCC--CCCc-CCHHHHHHHHH----HHH--hcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHH
Q 046900 168 ----------KIVPIHCDSS--NNFQ-ITPQALEAAYK----EAE--SKDMRVRGVLITNPSNPLGATI-QRSVLEELLD 227 (442)
Q Consensus 168 ----------~v~~v~~~~~--~~~~-~d~~~l~~~l~----~~~--~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~ 227 (442)
.+..++.+.. ..|. -|++.+++.+. +.- ....++.+|++.....-.|.+. +.+-+++|.+
T Consensus 162 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~ 241 (449)
T PRK07481 162 FRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVRE 241 (449)
T ss_pred cccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHH
Confidence 1222221110 0111 14444433322 110 1123566666554455567654 6666999999
Q ss_pred HHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH---
Q 046900 228 FATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR--- 303 (442)
Q Consensus 228 ~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~--- 303 (442)
+|++||+++|.||+...+...+..+. ...+. ..+. +-+++|.++ .| +.+|.+++ .+.+.+.+..
T Consensus 242 lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~g------v~PD---iv~~gKgl~-gG~~Pi~av~~-~~~i~~~~~~~~~ 309 (449)
T PRK07481 242 VCDRHGILLIADEVVTGFGRTGSWFG-SRGWG------VKPD---IMCLAKGIT-SGYVPLGATMV-NARIADAFEANAD 309 (449)
T ss_pred HHHHcCCEEEEeehhhCcCcCchhhH-hhhcC------CCCC---EEEEeeccc-CCCcCceEEEE-cHHHHHHHhccCc
Confidence 99999999999999987644443211 11111 1122 235799997 78 59999999 5666666542
Q ss_pred ------ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCCc
Q 046900 304 ------MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSPL 373 (442)
Q Consensus 304 ------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~ 373 (442)
....+..++++.+++.+.|+... + ....+..++.-+++.+.|++ +++......-|+++.+++...
T Consensus 310 ~~~~~~h~~T~~gnpl~~aaa~a~L~~l~---~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~ 384 (449)
T PRK07481 310 FGGAIMHGYTYSGHPVACAAALATLDIVV---R--EDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVAD 384 (449)
T ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHH---h--hhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEeccc
Confidence 11224456777666666665211 1 11223333333444444433 233222334456777776421
Q ss_pred cccc-----ChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 374 LEEQ-----TREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 374 ~~~~-----~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.... .......+...++++ ||++.+.. ..+||+.. .++++++++++++|.+++++.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~g-------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 385 KATREPIDPSKGYANAVADVAREN-GVLVRPSG-------TKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred ccccCCCCchhHHHHHHHHHHHhC-CeEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 1000 011245677777776 99998731 24888866 358999999999999998764
No 329
>PRK07036 hypothetical protein; Provisional
Probab=99.58 E-value=3e-12 Score=128.09 Aligned_cols=356 Identities=10% Similarity=0.059 Sum_probs=194.8
Q ss_pred CCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCC
Q 046900 41 YEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRA 116 (442)
Q Consensus 41 ~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 116 (442)
|..+...+.+||+..+. ..+ .++.+.+.+.+...... ....+.. ...+.+..+|+.+.....
T Consensus 44 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~---------~~~~~~~--~~~~~~~~lae~L~~~~p--- 109 (466)
T PRK07036 44 YVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLP---------YYTPFGD--MTNAPAAELAAKLAELAP--- 109 (466)
T ss_pred EEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCc---------ccccccc--cCCHHHHHHHHHHHHhCC---
Confidence 33445567788886553 223 23555555554432100 0011110 123555667776665321
Q ss_pred ccCCCcEEEecChHHHHHHHHHhhc------C-C-CCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCC
Q 046900 117 KFDLNRIVVTAGATAANELLTFILA------D-P-GDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDS 176 (442)
Q Consensus 117 ~~~~~~i~~t~G~~~ai~~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~ 176 (442)
-.-+.+++++++++|++.+++... . + ..+|+...-+|.+....+....|- .+..++...
T Consensus 110 -~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~ 188 (466)
T PRK07036 110 -GDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPN 188 (466)
T ss_pred -CCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCc
Confidence 123589999999999999887642 1 1 257888888887754322111111 122222211
Q ss_pred C--CCCcCC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 177 S--NNFQIT--------PQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 177 ~--~~~~~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
. ..+..+ .+.+++.+.. ....++.+|++.......|... +.+-+++|.++|++||+++|.||+...+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGf 266 (466)
T PRK07036 189 PYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGF 266 (466)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCC
Confidence 0 011111 2334444432 1123565666654456667755 5666999999999999999999999876
Q ss_pred CCCCCCcccHH-HHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHc---------cccCCCcHHH
Q 046900 246 AFSSSEFVSIA-EILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRM---------SSFTLISSQT 314 (442)
Q Consensus 246 ~~~~~~~~s~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~---------~~~~~~s~~~ 314 (442)
...|..+ ... .+.- .++ +-+++|.++ .| +.+|.+++ .+.+.+.+... ...+..++++
T Consensus 267 GRtG~~~-~~~~~~gv-----~PD----ivt~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~ 334 (466)
T PRK07036 267 GRLGHFF-ASEAVFGI-----QPD----IITFAKGLT-SGYQPLGAVII-SERLLDVISGPNAKGNVFTHGFTYSGHPVA 334 (466)
T ss_pred CcCchhh-hhhhhcCC-----CCC----EEEEccccc-cCccccEEEEE-cHHHHHHHhcccCcCcccccCCCCCCCHHH
Confidence 4444211 111 1111 122 336799998 78 48999998 56666665421 1123456777
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHH---hCCCeeecCCceEEEEEecCCccccc-----ChhhHHHHH
Q 046900 315 QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLR---SAGIECLKGNAGLFCWMNLSPLLEEQ-----TREGELALW 386 (442)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~---~~g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~l~ 386 (442)
.+++.+.|+.. ++ ....+..++.-++|.+.|+ ++++......-|+++.+++....... .......+.
T Consensus 335 ~aaa~a~Le~i---~~--~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~ 409 (466)
T PRK07036 335 CAAALKNIEIM---ER--EGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRID 409 (466)
T ss_pred HHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHH
Confidence 66666665421 10 1122233333333334433 33332223345667777774321100 011245677
Q ss_pred HHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 387 DSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 387 ~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
..++++ ||++.+.. +.+|++.. .++++++++++++|.+++++..
T Consensus 410 ~~~~~~-Gvl~~~~~-------~~~~l~Ppl~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 410 RHCQER-GLLVRPLE-------HLCVLSPPLIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred HHHHHC-CcEEeecC-------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 777776 99998631 35788865 4589999999999999988763
No 330
>PRK06149 hypothetical protein; Provisional
Probab=99.58 E-value=6.5e-12 Score=136.36 Aligned_cols=353 Identities=12% Similarity=0.137 Sum_probs=194.7
Q ss_pred CCCCCceeeeeccccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 44 STNPSGVIQMGLAENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 44 ~~~~~~~i~l~~~~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
+.....+||+..+...++ ++.+.+.+.+..... .....| ..+....+++.+.+... -..+
T Consensus 581 D~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l---------~~~~~~-----~~~~~~elae~L~~~~p----~~~~ 642 (972)
T PRK06149 581 DMAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLL---------NTNSRF-----HYAAVAEFSERLAALAP----DGLD 642 (972)
T ss_pred eCCCCEEEECCCCccccCCCCHHHHHHHHHHHHhc---------cccccc-----cCHHHHHHHHHHHHhCC----CCcC
Confidence 345667888876543343 355555544432210 001112 12344455555554321 1236
Q ss_pred cEEEecChHHHHHHHHH---hhcCCCCeEEEcCCCCcChHHhH-hhhc----Cc--------EEEEEecCCC--CCCc-C
Q 046900 122 RIVVTAGATAANELLTF---ILADPGDALLVPTPYYPGFDRDL-RWRT----GI--------KIVPIHCDSS--NNFQ-I 182 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~---~l~~~gd~Vl~~~p~y~~~~~~~-~~~~----G~--------~v~~v~~~~~--~~~~-~ 182 (442)
.+++++++++|+..+++ .... ...|+...-+|.+....+ .... +. .+..++.... ..|. .
T Consensus 643 ~v~f~~SGsEA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~ 721 (972)
T PRK06149 643 TVFLVNSGSEANDLAIRLAWAASG-RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGA 721 (972)
T ss_pred EEEEeCCchHHHHHHHHHHHHhcC-CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCc
Confidence 89999999999999887 3433 356777777776543221 1000 00 1122222111 1121 1
Q ss_pred C-----HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 183 T-----PQALEAAYKEAESKDMRVRGVLITNPSNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 183 d-----~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
+ .+.+++.++.....+.++.+|++..-....|. ..+.+-+++|.++|++||+++|.||++..|...|..+..+.
T Consensus 722 ~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e 801 (972)
T PRK06149 722 DSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFE 801 (972)
T ss_pred ccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhh
Confidence 1 24555555443323345555555433444454 55667799999999999999999999976544443222222
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH---ccccCCCcHHHHHHHHHHhcCchhHHHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR---MSSFTLISSQTQYLLASMLSNKKFTENYIK 333 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~---~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 333 (442)
...- ...+ -+++|.+| .|+.+|.+++ .+.+.+.+.. ..+.++.++++.+++.+.|+-.+ ++
T Consensus 802 ~~gv------~PDi---vt~gK~lg-~G~Pl~av~~-~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~--~e--- 865 (972)
T PRK06149 802 QQGV------VPDI---ITMAKGMG-NGHPLGAVIT-RREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLR--EE--- 865 (972)
T ss_pred hcCC------CCCE---EEeccccc-CCeeeEEEEE-cHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHH--hc---
Confidence 1111 1222 37899998 8999999999 5677766643 11223457777777666665211 11
Q ss_pred HHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCCcccc--cChhhHHHHHHHHHHcCcEEEeCCCCCCCCC
Q 046900 334 TNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSPLLEE--QTREGELALWDSMLHEVKLNISPGSSCHCSE 407 (442)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~ 407 (442)
...+..++.-+++.+.|++ +++......-|+++-+++...... ........++..++++ ||++.+.. ..
T Consensus 866 ~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~-Gvl~~~~g----~~ 940 (972)
T PRK06149 866 KLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLEL-GVIMQPTG----DH 940 (972)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhC-CeEEeecC----CC
Confidence 1222233333333344433 333222334566777776321110 1112356778888777 99998742 12
Q ss_pred CCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 408 PGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 408 ~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
...+|+... .++++++++++++|.+++.+
T Consensus 941 ~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 941 LNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 357898776 45999999999999999864
No 331
>PRK15029 arginine decarboxylase; Provisional
Probab=99.58 E-value=5.5e-13 Score=137.82 Aligned_cols=181 Identities=18% Similarity=0.174 Sum_probs=125.8
Q ss_pred Ccc-hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEE
Q 046900 94 YHG-LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPI 172 (442)
Q Consensus 94 ~~g-~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v 172 (442)
+.| ..+..+..|+.++ .....+++||+|.++.+++.+++++||.|+++..||-+...++.+ .|++++++
T Consensus 203 p~G~I~eAq~~aA~~fg---------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L-~ga~Pvyl 272 (755)
T PRK15029 203 HTGAFGESEKYAARVFG---------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLIL-TGAKPVYM 272 (755)
T ss_pred CCcHHHHHHHHHHHHhC---------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHH-cCCeEEEe
Confidence 344 3455555555554 245699999999999999999999999999999999999998885 99999998
Q ss_pred ecCCCCCCc----CC-----HHHHHHHHHHHHh----cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEe
Q 046900 173 HCDSSNNFQ----IT-----PQALEAAYKEAES----KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSD 239 (442)
Q Consensus 173 ~~~~~~~~~----~d-----~~~l~~~l~~~~~----~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~D 239 (442)
+... +.|+ ++ ++.++++++++.. .+.+++++++++|+. -|.+++ +++|++.|.++++.|++|
T Consensus 273 ~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvD 347 (755)
T PRK15029 273 VPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFD 347 (755)
T ss_pred cccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEE
Confidence 6443 2222 33 8899999976531 123556999999987 688888 788899999999999999
Q ss_pred ccCCc-CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEee
Q 046900 240 EIYSG-SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYS 292 (442)
Q Consensus 240 e~y~~-~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~ 292 (442)
|+|+. +.|.. .++....+..+........++++.|.+|.+ |++.- +++..
T Consensus 348 EAhGah~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv 399 (755)
T PRK15029 348 EAWYGYARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHV 399 (755)
T ss_pred CccccccccCc-cccccccccccccccCCCceEEEEchhhcc--cchhhhhhhee
Confidence 99975 33332 222111110000000012348889999998 44444 45555
No 332
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.57 E-value=1.7e-12 Score=128.75 Aligned_cols=280 Identities=13% Similarity=0.110 Sum_probs=166.8
Q ss_pred CcEEEecChHHHHHHHHHhhcC-------C-CCeEEEcCCCCcChHHhHhhhcCcE-------------EEEEecCCCCC
Q 046900 121 NRIVVTAGATAANELLTFILAD-------P-GDALLVPTPYYPGFDRDLRWRTGIK-------------IVPIHCDSSNN 179 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~~G~~-------------v~~v~~~~~~~ 179 (442)
+.+++++++++++..+++.... + ..+|+...-+|.+....+....|-. +..++... ..
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~-~~ 184 (427)
T TIGR00508 106 DCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQ-NR 184 (427)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCC-cc
Confidence 6899999999999988775431 2 2578888888877543322112211 11111110 01
Q ss_pred Cc-----CCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 180 FQ-----ITPQALEAAYKEAESKDMRVRGVLITNP-SNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 180 ~~-----~d~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+. -|.+++++.+.++ +.++.+|++..- ++-.|. ..+.+.+++|.++|++|++++|+||++..+...+..+
T Consensus 185 ~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~ 261 (427)
T TIGR00508 185 FDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLF 261 (427)
T ss_pred ccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccc
Confidence 11 1356677777542 234545444432 555565 4478889999999999999999999997654444322
Q ss_pred cc-HHHHHhhhcCCCCCcEEEEecCcccCCCCCc-eeEEEeecCHHHHHHHHHc-------cccCCCcHHHHHHHHHHhc
Q 046900 253 VS-IAEILEARQYKDSERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARRM-------SSFTLISSQTQYLLASMLS 323 (442)
Q Consensus 253 ~s-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~-RiG~i~~~~~~~~~~~~~~-------~~~~~~s~~~q~~~~~~l~ 323 (442)
.. ...+. ++ |+ +++|+++ .|+ .++.+++ ++.+.+.++.. ...+..++++..++.+.|+
T Consensus 262 ~~~~~~v~-------pD--i~--~~gK~l~-gG~~p~~a~~~-~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~ 328 (427)
T TIGR00508 262 ACEHAGVV-------PD--IL--CVGKALT-GGYMTLSATVT-TDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLA 328 (427)
T ss_pred hhhhcCCC-------CC--EE--Eechhhh-cCcccceEEEE-cHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence 11 11111 22 22 4799996 785 6787777 56777766531 1223456777666666665
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCe-eec--CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCC
Q 046900 324 NKKFTENYIKTNRERLQKRYQMIIEGLRSAGIE-CLK--GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPG 400 (442)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~--~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg 400 (442)
-. ++ ....+.++++-++|.+.|++++.. ... ..-|.++-+.+.... ....+...|+++ ||.+.+.
T Consensus 329 ~l---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~------~~~~~~~~l~~~-Gv~~~~~ 396 (427)
T TIGR00508 329 IL---LE--GEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPV------NVEELQKKFVEQ-GVWIRPF 396 (427)
T ss_pred HH---Hh--CCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCcc------CHHHHHHHHHHC-CeEEEec
Confidence 21 11 122344555556666666554211 111 122556666664311 246778888777 9999763
Q ss_pred CCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 401 SSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 401 ~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
. ..+|++.. .+++++++++++++.+++++
T Consensus 397 ~-------~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 397 G-------KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred C-------CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 1 35899876 34899999999999998864
No 333
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.57 E-value=1.1e-12 Score=120.51 Aligned_cols=155 Identities=22% Similarity=0.300 Sum_probs=123.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----HhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~~G~~v~~v 172 (442)
...|.+.||..-+- ---+.+++++.|+..++..++++||.|+-..--|.+.... ++ ..|.++..+
T Consensus 64 ~~vlE~RiAaLEGG----------~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~-~~Gi~v~fv 132 (426)
T COG2873 64 TDVLEERIAALEGG----------VAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLK-RLGIEVRFV 132 (426)
T ss_pred HHHHHHHHHHhhcc----------hhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHH-hcCcEEEEe
Confidence 46788888887651 1245677789999999999999999999988888775444 45 489999998
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
.. .|++.+++++++ ++|+|++..-.||.+.+.+ +++|+++|+++++++|+|...+.-. .
T Consensus 133 d~-------~d~~~~~~aI~~------nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpy-----l 191 (426)
T COG2873 133 DP-------DDPENFEAAIDE------NTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPY-----L 191 (426)
T ss_pred CC-------CCHHHHHHHhCc------ccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcce-----e
Confidence 63 368999999987 9999999999999999988 8899999999999999999987421 1
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEee
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYS 292 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~ 292 (442)
....+. +--|+++|+||..|-.|--+|-++.
T Consensus 192 ~rP~~h---------GADIVvHS~TK~igGhGt~iGG~iV 222 (426)
T COG2873 192 CRPIEH---------GADIVVHSATKYIGGHGTAIGGVIV 222 (426)
T ss_pred cchhhc---------CCCEEEEeecccccCCccccceEEE
Confidence 112222 3348899999999888888887776
No 334
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.57 E-value=2.6e-12 Score=127.05 Aligned_cols=342 Identities=12% Similarity=0.100 Sum_probs=188.3
Q ss_pred CCCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+.....+||+..+. ..+ ..+.+.+.+.+...... ...+.. -..+....+|+.+.+...
T Consensus 32 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~----------~~~~~~--~~~~~~~~lae~L~~~~p-- 97 (422)
T PRK05630 32 VFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMS----------HVMFGG--LTHEPAIKLTRKLLNLTD-- 97 (422)
T ss_pred eEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCC----------CcccCC--cCCHHHHHHHHHHHhhCC--
Confidence 344455667888986542 223 33555555554432100 000100 012344556666654321
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhcC-------CC-CeEEEcCCCCcChHHhHhhhcCc-------------EEEEEec
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILAD-------PG-DALLVPTPYYPGFDRDLRWRTGI-------------KIVPIHC 174 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~~G~-------------~v~~v~~ 174 (442)
-.-+.+++++++++|++.+++.... ++ .+|+...-+|.+....+....+- .+..+|.
T Consensus 98 --~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~ 175 (422)
T PRK05630 98 --NGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPA 175 (422)
T ss_pred --CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCC
Confidence 1236899999999999988875421 22 57888888887743322111110 1122222
Q ss_pred CCCCCCcCCH-------HHHHHHHHHHHhcCCceeEEEEeC-CCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 175 DSSNNFQITP-------QALEAAYKEAESKDMRVRGVLITN-PSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 175 ~~~~~~~~d~-------~~l~~~l~~~~~~~~~~~~v~l~~-P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
... ...+. +.+++.+.+ ++.+|++.. ...-.|... +.+-+++|.++|++|++++|.||++..+
T Consensus 176 ~~~--~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~ 247 (422)
T PRK05630 176 PPV--RGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGF 247 (422)
T ss_pred Ccc--cCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCC
Confidence 210 01111 233333322 566666654 266677754 5667999999999999999999999765
Q ss_pred CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--------ccccCCCcHHHHH
Q 046900 246 AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR--------MSSFTLISSQTQY 316 (442)
Q Consensus 246 ~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~--------~~~~~~~s~~~q~ 316 (442)
...|..+ ......- .+| | -+|+|.++ .| ..+|++++ ++.+.+.+.. ....+..+++...
T Consensus 248 GrtG~~~-a~~~~gv-----~PD--i--~t~gK~l~-gG~~p~~av~~-~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~a 315 (422)
T PRK05630 248 GRTGELF-ATLAAGV-----TPD--I--MCVGKALT-GGFMSFAATLC-TDKVAQLISTPNGGGALMHGPTFMANPLACA 315 (422)
T ss_pred CcCchhh-HHHhcCC-----CCC--e--eeeechhh-cCccccceeec-cHHHHHHHhccCCCCccccCCCCcCCHHHHH
Confidence 4333211 1111100 112 2 27899986 67 48899998 5666666542 1223445666666
Q ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee--cCCceEEEEEecCCcccccChhhHHHHHHHHHHcC
Q 046900 317 LLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECL--KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEV 393 (442)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 393 (442)
++.+.|+... + ...++.+++.-+++.+.|+++ ..... ...-|+++-+++.... ....+...++++
T Consensus 316 aa~aaL~~l~---~--~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~------~~~~~~~~~~~~- 383 (422)
T PRK05630 316 VAHASLEIIE---T--GMWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPV------DMEEATQAAVDH- 383 (422)
T ss_pred HHHHHHHHHH---h--CcHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcc------cHHHHHHHHHHC-
Confidence 6665554211 1 011223333333444444322 11111 1233667777775421 145677777776
Q ss_pred cEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 394 KLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 394 gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
||.+.+. + ..+|+..+ .++++++++++++|.+++..
T Consensus 384 Gl~~~~~------g-~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 384 GVWLRPF------G-RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CeEEEec------C-CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 9999763 1 47898876 45899999999999999864
No 335
>PRK07483 hypothetical protein; Provisional
Probab=99.57 E-value=4e-12 Score=126.53 Aligned_cols=360 Identities=13% Similarity=0.095 Sum_probs=193.7
Q ss_pred CCCCCCCCceeeeecc--cccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCC
Q 046900 41 YEESTNPSGVIQMGLA--ENQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRA 116 (442)
Q Consensus 41 ~~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 116 (442)
|..+.....+||+..+ ...+ .++.+.+.+.+..... ..+....-..+....+|+.+.+...
T Consensus 23 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~------------~~~~~~~~~~~~~~~lae~L~~~~p--- 87 (443)
T PRK07483 23 YLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRL------------AYAHTSFFTTEPAEALADRLVAAAP--- 87 (443)
T ss_pred EEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhc------------cCccccccCCHHHHHHHHHHHHhCC---
Confidence 3334556778898654 3333 2355555555443211 0000000113445566666664321
Q ss_pred ccCCCcEEEecChHHHHHHHHHhhcC-------CC-CeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCC
Q 046900 117 KFDLNRIVVTAGATAANELLTFILAD-------PG-DALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDS 176 (442)
Q Consensus 117 ~~~~~~i~~t~G~~~ai~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~ 176 (442)
-..+.++++++++++++.+++.... +| .+|+...-+|.+....+....|- .+..++...
T Consensus 88 -~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~ 166 (443)
T PRK07483 88 -AGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCY 166 (443)
T ss_pred -CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCc
Confidence 1236899999999999998875431 23 46888787887654322111111 111222110
Q ss_pred CCCCcC-----C--------HHHHHHHHHHHHhcCCceeEEEEeCCCC-CCCc-CCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 177 SNNFQI-----T--------PQALEAAYKEAESKDMRVRGVLITNPSN-PLGA-TIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 177 ~~~~~~-----d--------~~~l~~~l~~~~~~~~~~~~v~l~~P~N-PtG~-~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
.|.. + ++.+++.+... ...++.+|++..-.. -.|. ..+.+-+++|.++|++||+++|.||+
T Consensus 167 --~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV 242 (443)
T PRK07483 167 --AYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEV 242 (443)
T ss_pred --cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecc
Confidence 0110 0 24555545321 123555555553332 3465 45667799999999999999999999
Q ss_pred CCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc-eeEEEeecCHHHHHHHHH------ccccCCCcHHH
Q 046900 242 YSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARR------MSSFTLISSQT 314 (442)
Q Consensus 242 y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~-RiG~i~~~~~~~~~~~~~------~~~~~~~s~~~ 314 (442)
...+...|..+ ....+.- .+. +-+++|.++ .|+ .+|.+++ .+.+.+.+.. ....+..++++
T Consensus 243 ~tGfGRtG~~~-a~~~~gv------~PD---iv~~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~h~~T~~gnpl~ 310 (443)
T PRK07483 243 MCGMGRTGTLF-ACEEDGV------APD---LVTIAKGLG-AGYQPIGAVLA-SDRIYDAIADGSGFFQHGHTYLGHATA 310 (443)
T ss_pred eeCcccCcHHH-HHhhcCC------CCC---eeeehhhhc-cCccccEEEEE-cHHHHHHHhcCCCccccCCCCCCCHHH
Confidence 98764444311 1111111 122 235799998 886 9999999 5666666542 11234457777
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHH----hCCCeeecCCceEEEEEecCCcccc-----cChhhHHHH
Q 046900 315 QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLR----SAGIECLKGNAGLFCWMNLSPLLEE-----QTREGELAL 385 (442)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~g~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~l 385 (442)
..++.+.|+-.+ + ....+..++.-++|.+.|+ +++.......-|+++-+++...... ........+
T Consensus 311 ~aaa~a~l~~i~---~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~ 385 (443)
T PRK07483 311 CAAALAVQRVIA---E--DGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARI 385 (443)
T ss_pred HHHHHHHHHHHH---h--cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHH
Confidence 666666664211 1 1122223333333334433 2332222234556666666321100 001123567
Q ss_pred HHHHHHcCcEEEeCCCC-CCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 386 WDSMLHEVKLNISPGSS-CHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 386 ~~~l~~~~gi~v~pg~~-f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
...++++ ||++.+... ........+|+... .++++++++++++|.+++.+..
T Consensus 386 ~~~~~~~-Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 386 KREAMAR-GLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred HHHHHHC-CcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7788777 999987421 11111357999876 4589999999999999998654
No 336
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.57 E-value=2.5e-12 Score=127.08 Aligned_cols=253 Identities=17% Similarity=0.136 Sum_probs=176.7
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCC--------C------CeEEEcCCCCcChHHhH
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADP--------G------DALLVPTPYYPGFDRDL 161 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~--------g------d~Vl~~~p~y~~~~~~~ 161 (442)
+...+.+.+.+++.+.++.+ ..-.-.+|+|+|+++.+.+.+.... + ..|+++.-.|..+..++
T Consensus 98 ~a~~~E~~~v~~l~~l~~~~---~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa 174 (460)
T COG0076 98 AAAELEERVVNMLSDLLGAP---EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAA 174 (460)
T ss_pred hHHHHHHHHHHHHHHHhCCC---CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHH
Confidence 67899999999999987732 3446889999999999776554211 1 16899999999999999
Q ss_pred hhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 162 RWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 162 ~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
.. +|+++..++++.. .+.+|++++++.+.+....+ +|+.+-++.+||.+=+ +++|.++|+++++++.+|.+
T Consensus 175 ~~-lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDd---i~~ia~ia~~~~i~lHVDAA 245 (460)
T COG0076 175 RY-LGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDD---IEELADIAEEYGIWLHVDAA 245 (460)
T ss_pred HH-hCCCceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCC---HHHHHHHHHHcCCcEEEEcc
Confidence 95 9999999999875 78999999999999742111 3777788999999866 88889999999999999999
Q ss_pred CCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCH-HHHHHHHHccccCC----------C
Q 046900 242 YSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYND-KVVTTARRMSSFTL----------I 310 (442)
Q Consensus 242 y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~-~~~~~~~~~~~~~~----------~ 310 (442)
|+.+...-...... ++-. .....-+.-+++|.. ++-..+||++..++ .+.+.+.....++. .
T Consensus 246 ~GG~~~pf~~~~~~--~~f~----l~~vdSIt~d~HK~g-~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~ 318 (460)
T COG0076 246 FGGFLLPFLEPDGR--WDFG----LEGVDSITVDGHKYG-LAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILG 318 (460)
T ss_pred ccceeecccCccch--hhcC----CCCceEEEECccccc-CCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEee
Confidence 99866421111111 1111 112223356999965 57788999999877 45554432221111 1
Q ss_pred cH-----HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCceEEEEEecCC
Q 046900 311 SS-----QTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECLKGNAGLFCWMNLSP 372 (442)
Q Consensus 311 s~-----~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~ 372 (442)
+. +.+++....+. .+-++++.++..+..+++.+.|++.| +++..+.....+.++.++
T Consensus 319 sr~~~~~~~~~~~l~~lG-----~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~ 381 (460)
T COG0076 319 SRPGRQALALYANLRRLG-----REGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD 381 (460)
T ss_pred ccchHHHHHHHHHHHHhC-----HhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence 11 22333333332 23356777788889999999999986 888764455567777755
No 337
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.56 E-value=9.4e-12 Score=124.45 Aligned_cols=307 Identities=12% Similarity=0.072 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC-------C-CCeEEEcCCCCcChHHhHhhhcCc---
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD-------P-GDALLVPTPYYPGFDRDLRWRTGI--- 167 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~~G~--- 167 (442)
+.+..+|+.+.+... ...+.+++++++++|++.+++.... + ..+|+...-+|.+....+....|.
T Consensus 90 ~~~~~lae~L~~~~p----~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 165 (466)
T PRK07030 90 EPVIELSERLVKITP----PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALF 165 (466)
T ss_pred HHHHHHHHHHHHhCC----CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccc
Confidence 445556666654321 1236899999999999998876521 2 357888888887754332211121
Q ss_pred ---------EEEEEecCCCC--CCcC--------CHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCCcC-CCHHHHHHHH
Q 046900 168 ---------KIVPIHCDSSN--NFQI--------TPQALEAAYKEAESKDMRVRGVLITN-PSNPLGAT-IQRSVLEELL 226 (442)
Q Consensus 168 ---------~v~~v~~~~~~--~~~~--------d~~~l~~~l~~~~~~~~~~~~v~l~~-P~NPtG~~-~~~~~l~~l~ 226 (442)
.+..+|..... .+.. +++.+++.+.+ .+.++.+|++.. ...-.|.+ .+.+-+++|.
T Consensus 166 ~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr 242 (466)
T PRK07030 166 TETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLR 242 (466)
T ss_pred cccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHHHHHHHH
Confidence 12222211100 0011 24556666653 234566666553 25556764 4566799999
Q ss_pred HHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--
Q 046900 227 DFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR-- 303 (442)
Q Consensus 227 ~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~-- 303 (442)
++|++||+++|.||+...+...+..+ ....+.- .+.+ -+++|.++ .| +.+|.+++ ++++.+.+..
T Consensus 243 ~lc~~~g~llI~DEV~TGfGRtG~~~-a~~~~gv------~PDi---v~~gKgl~-gG~~Pi~av~~-~~ei~~~~~~~~ 310 (466)
T PRK07030 243 EACDRYGVHLIHDEIAVGFGRTGTMF-ACEQAGI------RPDF---LCLSKALT-GGYLPLAAVLT-TDTVYQAFYDDY 310 (466)
T ss_pred HHHHHcCCEEEEeehhhCcCccccch-HHHhcCC------CCCE---Eeeehhcc-CCcccceEEEe-cHHHHHHHhccc
Confidence 99999999999999998765445322 1111111 1222 35699998 89 49999999 5666665531
Q ss_pred -------ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh---CCCeeecCCceEEEEEecCCc
Q 046900 304 -------MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS---AGIECLKGNAGLFCWMNLSPL 373 (442)
Q Consensus 304 -------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~g~~~~~~~~g~~~~~~~~~~ 373 (442)
....+..++++.+++.+.|+-.. + ....++.++.-+++.+.|++ +..-.....-|+++-+++...
T Consensus 311 ~~~~~~~h~~T~~gnpla~aaa~a~L~~i~---~--~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~ 385 (466)
T PRK07030 311 PTLRAFLHSHSYTGNPLACAAALATLDIFE---Q--DNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQD 385 (466)
T ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHHH---h--cCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccC
Confidence 12224457777777666665211 1 11222333333344444433 222111234566777776431
Q ss_pred ccc-----cChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 374 LEE-----QTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 374 ~~~-----~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
... ........+...++++ ||++.+. ...+|+..+ .++++++++++++|.+++++.
T Consensus 386 ~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~-------g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 386 KASKTPYPWQERRGLKVYQHALER-GALLRPL-------GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred ccccccCcchhHHHHHHHHHHHHC-CeEEEec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 110 0001124677777776 9999762 136888755 459999999999999999875
No 338
>PRK06148 hypothetical protein; Provisional
Probab=99.56 E-value=9e-12 Score=135.35 Aligned_cols=355 Identities=10% Similarity=0.047 Sum_probs=198.5
Q ss_pred CCCCCceeeeeccccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 44 STNPSGVIQMGLAENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 44 ~~~~~~~i~l~~~~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
+.....+||+..+...++ ++.+.+.+.++.... .....|. .+....+|+.+..... -.-+
T Consensus 620 D~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l---------~~~~~~~-----~~~~~~lAe~L~~~~p----~~~~ 681 (1013)
T PRK06148 620 DNRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARL---------NTNTRYL-----HDAIVAYAERLTATLP----DGLT 681 (1013)
T ss_pred ECCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhc---------CCcCCcC-----CHHHHHHHHHHHHhCC----CCcC
Confidence 445667888876654443 355665555543210 0111221 3445556666654321 1236
Q ss_pred cEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcC------------cEEEEEecC--CCCCCcC-C-
Q 046900 122 RIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTG------------IKIVPIHCD--SSNNFQI-T- 183 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G------------~~v~~v~~~--~~~~~~~-d- 183 (442)
.+++++++++|++.+++... .....|+...-+|.+....+....| -.+..++.. ....|.. +
T Consensus 682 ~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 761 (1013)
T PRK06148 682 VAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDA 761 (1013)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChh
Confidence 79999999999999887652 2235788888888765432110011 011111111 0011211 1
Q ss_pred ------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 184 ------PQALEAAYKEAESKDMRVRGVLITNPSNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 184 ------~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
.+.+++.+......+.++.++++..-..-.|. ..+.+-++++.++|++||+++|.||+...|...|..+....
T Consensus 762 ~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e 841 (1013)
T PRK06148 762 EHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFE 841 (1013)
T ss_pred hhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhh
Confidence 13455555432222345655555433444455 45667799999999999999999999987654443221211
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH---ccccCCCcHHHHHHHHHHhcCchhHHHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR---MSSFTLISSQTQYLLASMLSNKKFTENYIK 333 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~---~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 333 (442)
...- .++ +-+++|.+| .|+.+|.+++ .+++.+.+.. ..+.+..++++.+++.+.|+-.. + +
T Consensus 842 ~~gv-----~PD----ivt~gK~lg-gG~Plgav~~-~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~--~---e 905 (1013)
T PRK06148 842 TQGV-----VPD----IVTMGKPIG-NGHPMGAVVT-TREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIE--D---E 905 (1013)
T ss_pred hcCC-----Ccc----eeeeccccc-CCcceEEEEE-cHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHh--h---c
Confidence 1111 112 346799998 8999999999 5677666542 22334557777776666655211 1 0
Q ss_pred HHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCCcccc--cChhhHHHHHHHHHHcCcEEEeCCCCCCCCC
Q 046900 334 TNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSPLLEE--QTREGELALWDSMLHEVKLNISPGSSCHCSE 407 (442)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~ 407 (442)
...+..++.-++|.+.|++ +++......-|+++-+++...... ........++..++++ ||++.+... .
T Consensus 906 ~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~g~----~ 980 (1013)
T PRK06148 906 DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARER-GILIGTEGP----H 980 (1013)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhC-CeEEeccCC----C
Confidence 1222233333344444433 333222234566777776432111 1112245677788776 999987421 2
Q ss_pred CCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 408 PGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 408 ~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
...+||... .++++++++++++|.+++.+.
T Consensus 981 ~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 981 DNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 367888876 459999999999999999764
No 339
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.56 E-value=7.7e-12 Score=125.11 Aligned_cols=353 Identities=12% Similarity=0.081 Sum_probs=194.5
Q ss_pred CCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCcc
Q 046900 43 ESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKF 118 (442)
Q Consensus 43 ~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~ 118 (442)
.+...+.+||+..+- ..+ .++.+.+.+.++...... .....+ ..+.+..+|+.+.+... .
T Consensus 51 ~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~-------~~~~~~-----~~~~~~~lae~L~~~~p----~ 114 (460)
T PRK06916 51 YDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAH-------STLLGL-----ANVPSILLAEKLIEVVP----E 114 (460)
T ss_pred EeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCC-------cccccc-----CCHHHHHHHHHHHHhCC----C
Confidence 345567788886542 222 345555555544321100 000011 12444556666654321 1
Q ss_pred CCCcEEEecChHHHHHHHHHhhcC-------C-CCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCCCC
Q 046900 119 DLNRIVVTAGATAANELLTFILAD-------P-GDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDSSN 178 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~~~ 178 (442)
..+.+++++++++|++.+++.... + ..+|+...-+|.+....+....|. .+..+|.....
T Consensus 115 ~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~ 194 (460)
T PRK06916 115 GLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTY 194 (460)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCccc
Confidence 236899999999999998876532 3 357888888887754322211121 12222221000
Q ss_pred --CCc--------CCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 179 --NFQ--------ITPQALEAAYKEAESKDMRVRGVLITN-PSNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 179 --~~~--------~d~~~l~~~l~~~~~~~~~~~~v~l~~-P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
.+. -+++.+++.+++ .+.++.+|++.. ...-.|.+ .+.+-+++|.++|++||+++|.||++..+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~G 271 (460)
T PRK06916 195 RSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFG 271 (460)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCC
Confidence 011 124556666653 234666666654 35666765 477779999999999999999999998754
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH---------ccccCCCcHHHHH
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR---------MSSFTLISSQTQY 316 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~---------~~~~~~~s~~~q~ 316 (442)
..|..+ ....+. ....+ -+++|.++ .| +.+|.+++ .+++.+.+.. ....+..++++..
T Consensus 272 RtG~~~-a~~~~g------v~PDi---v~~gK~l~-gG~~Pi~av~~-~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~a 339 (460)
T PRK06916 272 RTGKMF-ACEHEN------VTPDI---MTAGKGLT-GGYLPIAITVT-TDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCA 339 (460)
T ss_pred cCchhh-HHHhcC------CCCCe---eeeehhhh-cCccccceeee-cHHHHHHhhccccccCccccCCCCCCCHHHHH
Confidence 444321 111111 11222 36799998 88 59999999 5566655431 1112345677766
Q ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC---CCeeecCCceEEEEEecCCccccc-----ChhhHHHHHHH
Q 046900 317 LLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA---GIECLKGNAGLFCWMNLSPLLEEQ-----TREGELALWDS 388 (442)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~l~~~ 388 (442)
++.+.|+.. ++ ....+.+++.-+++.+.|+++ ........-|+++-+++....... .......+...
T Consensus 340 aa~a~l~~l---~~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~ 414 (460)
T PRK06916 340 VALANLELY---EK--TNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKR 414 (460)
T ss_pred HHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHH
Confidence 666665421 11 112233344444444444432 211122234456666664211100 00113467777
Q ss_pred HHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 389 MLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 389 l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
++++ ||++.|. ...+|+..+ .++++++++++++|.+++++...
T Consensus 415 ~~~~-Gvl~~~~-------g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06916 415 SREL-GMLTRPL-------GNTIVFMPPLASTIDELDEMLRILYKAISDVTE 458 (460)
T ss_pred HHHC-CeEEEec-------CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhcc
Confidence 7776 9999873 136888754 45999999999999999987644
No 340
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.56 E-value=2.1e-11 Score=121.97 Aligned_cols=314 Identities=15% Similarity=0.058 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHhCCCCccC-CCcEEEe-cChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCc-------
Q 046900 99 SFRQAMASFMEQIRGGRAKFD-LNRIVVT-AGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGI------- 167 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~-~~~i~~t-~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~------- 167 (442)
+.+..+|+.+...... ... .+.++++ +++++|++.+++... ....+|+...-+|.+....+....|.
T Consensus 106 ~~~~~la~~L~~~~p~--~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~ 183 (464)
T PRK06938 106 PVKDQFVQDLFASLPE--AFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPL 183 (464)
T ss_pred HHHHHHHHHHHHhCcc--cccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccC
Confidence 4445566655543210 011 1356665 789999998887642 22367888888887754332211110
Q ss_pred -----EEEEEecCCCC--CCc--------CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHh
Q 046900 168 -----KIVPIHCDSSN--NFQ--------ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATR 231 (442)
Q Consensus 168 -----~v~~v~~~~~~--~~~--------~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~ 231 (442)
.+..+|..... .+. .+.+.+++.+.+......++.+|++..-..-.|.+. +.+-++++.++|++
T Consensus 184 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~ 263 (464)
T PRK06938 184 GALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEE 263 (464)
T ss_pred CCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 12233322110 011 125667777754211112455555543344457654 57779999999999
Q ss_pred cCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCC
Q 046900 232 KNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTL 309 (442)
Q Consensus 232 ~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~ 309 (442)
||+++|.||+...|...|. +...... +..+.+ -+++|.+| .|+.+|.+++. +.+ +.+.. ..+.+.
T Consensus 264 ~giLlI~DEV~tGfGRtG~----~~a~e~~---gv~PDi---v~~gKglg-gG~PlsAv~~~-~~~-~~~~~~~~~~T~~ 330 (464)
T PRK06938 264 AGIPLIVDEIQSGFGRTGK----MFAFEHA---GIIPDV---VVLSKAIG-GSLPLAVVVYR-EWL-DTWQPGAHAGTFR 330 (464)
T ss_pred cCCEEEEeccccCCCcCcH----HHHHHhc---CCCCCE---EEeecccc-CCCceEEEeeh-hHh-hccCCCCCCCCCC
Confidence 9999999999988644443 1111110 011222 35699998 89999999984 444 33321 223345
Q ss_pred CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCCcccc------c--
Q 046900 310 ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSPLLEE------Q-- 377 (442)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~~------~-- 377 (442)
.++++.+++.+.|+... ++ ...+..++.-+++.+.|++ +++......-|+++.+++...... .
T Consensus 331 gnpla~Aaa~a~L~~l~--~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~ 405 (464)
T PRK06938 331 GNQMAMAAGSATLRYIK--EH---RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPA 405 (464)
T ss_pred cCHHHHHHHHHHHHHHH--Hh---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCc
Confidence 67777777666665211 11 1122222333333333332 333233345567777777432110 0
Q ss_pred ChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 378 TREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 378 ~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.......++..++++ ||.+.++..+ ...+|+..+ .+++++++++++++.+++.+.
T Consensus 406 ~~~~~~~~~~~~~~~-Gll~~~~g~~----~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 406 NGELASLIQRECLRR-GLILELGGRH----GSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred cHHHHHHHHHHHHHC-CeEEeecCCC----CCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 011245667777776 9999875322 256898755 459999999999999998764
No 341
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.56 E-value=3.8e-12 Score=132.80 Aligned_cols=318 Identities=15% Similarity=0.166 Sum_probs=194.1
Q ss_pred CCcccccCC---CcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh----cCC----CCeEEEcCCC
Q 046900 85 FRENALFQD---YHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL----ADP----GDALLVPTPY 153 (442)
Q Consensus 85 ~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l----~~~----gd~Vl~~~p~ 153 (442)
|...+-|.| .+|+.++...+.+++.+..| .+.-.+.-.+| .++....+.++ ..+ .+.|+++.-.
T Consensus 526 F~t~hPyqp~e~sQG~lq~i~elq~~l~eLtG----md~~Sl~p~sG-A~gE~A~Lmair~yh~~~Ge~~r~~vLIp~sa 600 (954)
T PRK12566 526 FAQLHPFAPREQAEGYRAMIDELEAWLCAITG----FDAICMQPNSG-AQGEYAGLLAIRRYHRSRGQSQRDICLIPSSA 600 (954)
T ss_pred hhcCCCCCchhhhcCHHHHHHHHHHHHHHHHC----CCeEeecCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEecccc
Confidence 344566777 68999999999999998876 23333433344 33332333332 222 3578888877
Q ss_pred CcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcC
Q 046900 154 YPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN 233 (442)
Q Consensus 154 y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~ 233 (442)
|......+.. .|++++.++.++++ .+|+++|++.+.+. ..++.+|++++|++-++. .+.+++|+++|+++|
T Consensus 601 HgtNpasa~~-~GieVv~Vp~D~~G--~iDle~L~a~I~~~---~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~G 671 (954)
T PRK12566 601 HGTNPASAQM-AGMRVVIVECDPDG--NVDLDDLKAKAAAA---GDRLSCLMITYPSTHGVY---EEGIREICEVVHQHG 671 (954)
T ss_pred cccCHHHHHH-CCCEEEEeccCCCC--CcCHHHHHHHhhcc---CCCEEEEEEEecCcCcee---cchHHHHHHHHHHcC
Confidence 7555555664 89999999998654 69999999998732 237777888888775543 355999999999999
Q ss_pred cEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC----CCceeEEEeecCHHHHHHHHHcc----
Q 046900 234 IHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL----PGFRVGTIYSYNDKVVTTARRMS---- 305 (442)
Q Consensus 234 ~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~----~G~RiG~i~~~~~~~~~~~~~~~---- 305 (442)
+++++|.++.... .......++. --++.++++|+|+. .|.-+|.+.+ .+.+...+....
T Consensus 672 alv~vDgA~~~a~---~~l~~Pg~~G---------ADi~~~s~HKtf~~P~G~GGP~vG~iav-~~~L~pfLp~~P~~d~ 738 (954)
T PRK12566 672 GQVYMDGANLNAQ---VGLARPADIG---------ADVSHMNLHKTFCIPHGGGGPGMGPIGV-RAHLAPFVANHPVVPV 738 (954)
T ss_pred CEEEEEeeChhhc---cCCCChhhcC---------CCEEEecCCcccCcCccCCCCccchhhh-hhhhhhhccCCCCcCC
Confidence 9999999986311 1222233343 33788999998852 2344566555 343444433221
Q ss_pred -----ccCCC------cHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEE--EEEecC
Q 046900 306 -----SFTLI------SSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLF--CWMNLS 371 (442)
Q Consensus 306 -----~~~~~------s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~--~~~~~~ 371 (442)
..... +.....++..++...+. + +++....-..+..++.+.|.+. ++.+.++.+.+| +.++++
T Consensus 739 ~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~--e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~ 815 (954)
T PRK12566 739 EGPDPNNGAVSAAPWGSASILPISWMYIAMMGP--Q-LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLR 815 (954)
T ss_pred CCCCCCCCceeecccchHHHHHHHHHHHHHHCH--H-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEcc
Confidence 01111 11222333344443222 2 4555555566778888888663 444432222222 223333
Q ss_pred CcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee--cCCHHHHHHHHHHHHHHHHHHH
Q 046900 372 PLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA--NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 372 ~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
...+..+ .+..++.++|++ +||...- ..|. ..+++|++.. . +++++++++++|+++.++..
T Consensus 816 ~l~~~~g-~~~~dvakRL~d-~Gihapt-~~fP--v~~~LmIepTE~e-skeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 816 PLKAQTG-ISEEDVAKRLMD-YGFHAPT-MSFP--VPGTLMVEPTESE-SKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred ccccccC-CCHHHHHHHHHH-CCcEEeE-Eeec--cCCEEEEEeeeeC-CHHHHHHHHHHHHHHHHHHH
Confidence 2221111 135779999984 5987543 3343 3678999986 4 89999999999999887743
No 342
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.56 E-value=4.1e-12 Score=133.37 Aligned_cols=311 Identities=13% Similarity=0.128 Sum_probs=189.7
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHH---HHHhhc-----CCCCeEEEcCCCCcChHHhHhhhcC
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANEL---LTFILA-----DPGDALLVPTPYYPGFDRDLRWRTG 166 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~---~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~~G 166 (442)
+|+.++...+.+|+.+..| ++.-.+...+| .++-.. +++... ...+.|+++.-.|......+.. .|
T Consensus 526 qG~lq~i~elq~~l~eltG----md~~Sl~p~aG-A~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~-~G 599 (939)
T TIGR00461 526 EGYQELIAQLEKWLCSITG----FDAISLQPNSG-AQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAM-AG 599 (939)
T ss_pred HHHHHHHHHHHHHHHHHHC----CCCcccCCchH-HHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHH-CC
Confidence 6788899999999998877 44333433444 433332 223211 1235789999999777777774 89
Q ss_pred cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 167 ~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
++++.++.++++ .+|+++|++.+.+ .+.++++|++++|+| +|.+-+ .+++|+++|+++|.++++|.++....
T Consensus 600 ~~Vv~V~~d~~G--~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgAq~~al 671 (939)
T TIGR00461 600 MQVVPVNCDQDG--NIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGANMNAQ 671 (939)
T ss_pred CEEEEeccCCCC--CcCHHHHHHHHhh---cCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEecChhhC
Confidence 999999987544 6999999999975 234889999999999 787743 38899999999999999999985311
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC----CCCceeEEEeecCHHHHHHHH-H-c----------cccCCC
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG----LPGFRVGTIYSYNDKVVTTAR-R-M----------SSFTLI 310 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g----~~G~RiG~i~~~~~~~~~~~~-~-~----------~~~~~~ 310 (442)
. . ..+...+ +--+++.|.+|+|+ ..|-.+|++.+. +.+...+- . . .....+
T Consensus 672 ~-~--l~~Pg~~---------GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr-~~L~~~lPg~~v~~t~d~~greq~Iga~ 738 (939)
T TIGR00461 672 V-G--LTSPGDL---------GADVCHLNLHKTFCIPHGGGGPGMGPIGVK-SHLIPFLPKHDVVSMITGIGGSKSIGSV 738 (939)
T ss_pred C-C--CCCcccc---------CCCEEEecCCccCCCCCCCCCCCeEEEEEh-hhchhhcCCCcccccccCCCCccccccc
Confidence 1 1 1121222 33377889999764 345557999884 33333321 0 0 000111
Q ss_pred c------HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-CceE-E--EEEecCCcccccChh
Q 046900 311 S------SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKG-NAGL-F--CWMNLSPLLEEQTRE 380 (442)
Q Consensus 311 s------~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~-~--~~~~~~~~~~~~~~~ 380 (442)
+ ......+..++...+ .+-+++..+.--.+..++.+.|.+ ++++.-+ ..+. + +.++++......+ .
T Consensus 739 s~~~~g~a~~~l~a~~yi~~lG--~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g-~ 814 (939)
T TIGR00461 739 SAAPYGSASILPISWMYIKMMG--NEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTG-I 814 (939)
T ss_pred cccccCcHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcC-C
Confidence 1 111111122222111 233566666666678888888876 4443322 1222 2 3345553211111 1
Q ss_pred hHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 381 GELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 381 ~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
...++.++|++. |+.-.. ..|...+.-.|+.+-.. ++++||++++.|.++-++..+
T Consensus 815 ~~~dIakrL~d~-G~hapt-~~~pv~g~lmiepTE~e-skeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 815 EAIDVAKRLQDY-GFHAPT-LSFPVPGTLMVEPTESE-SLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred CHHHHHHHHHhC-Ceeccc-cCCccCCeEEEEeeccC-CHHHHHHHHHHHHHHHHHHHH
Confidence 367899999887 997433 33433222235566666 899999999999888766543
No 343
>PRK07480 putative aminotransferase; Validated
Probab=99.55 E-value=4.2e-12 Score=126.71 Aligned_cols=356 Identities=13% Similarity=0.105 Sum_probs=191.3
Q ss_pred CCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCc
Q 046900 42 EESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK 117 (442)
Q Consensus 42 ~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~ 117 (442)
..+...+.+||+..+. ..+ ..+.+.+.+.++..... ....+ .....+.+..+|+.+.+...
T Consensus 44 l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~---------~~~~~--~~~~~~~~~~lae~L~~~~p---- 108 (456)
T PRK07480 44 LWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELP---------YYNTF--FKTTHPPAIELAAKLAEVAP---- 108 (456)
T ss_pred EEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcC---------Ccccc--cccCCHHHHHHHHHHHHhCC----
Confidence 3345567788886542 223 23555555554432100 00000 01224555666666665422
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcC-------CC-CeEEEcCCCCcChHHhHhhhcCcE------------EEEEecCC-
Q 046900 118 FDLNRIVVTAGATAANELLTFILAD-------PG-DALLVPTPYYPGFDRDLRWRTGIK------------IVPIHCDS- 176 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~~G~~------------v~~v~~~~- 176 (442)
...+.++++++++++++.+++.... +| .+|+...-+|.+.........|.. +..++...
T Consensus 109 ~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~ 188 (456)
T PRK07480 109 PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYW 188 (456)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcc
Confidence 1246899999999999998875421 22 467777777776432211011211 11111100
Q ss_pred -CCCCcCC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 177 -SNNFQIT--------PQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 177 -~~~~~~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
...+..+ .+.+++.+.+. ...++.+|++.....-.|.+. +.+-+++|.++|++||+++|.||++..|.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfG 266 (456)
T PRK07480 189 FGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFG 266 (456)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 0000011 24454444321 123566666654455567755 55569999999999999999999998764
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc-eeEEEeecCHHHHHHHHH------ccccCCCcHHHHHHHH
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARR------MSSFTLISSQTQYLLA 319 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~-RiG~i~~~~~~~~~~~~~------~~~~~~~s~~~q~~~~ 319 (442)
..|..+ ....+.- .++ +-+|+|.++ .|+ .+|.+++ ++.+.+.+.. ....+..++++.+++.
T Consensus 267 RtG~~~-a~~~~gv-----~PD----iv~~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~ 334 (456)
T PRK07480 267 RTGEWF-GSQHFGI-----KPD----LMTIAKGLT-SGYIPMGAVGV-GDRVAEVLIEEGGEFNHGFTYSGHPVAAAVAL 334 (456)
T ss_pred cCcchh-hhhhcCC-----CCC----eeeeehhhc-cCCccceEEEE-cHHHHHHHhcCCCCcccCCCCCcCHHHHHHHH
Confidence 444322 1111111 122 346899997 784 8999999 5666666521 1223456777777777
Q ss_pred HHhcCchhHHHHHHHHHHHH-HHHHHHHHHHH---HhCCCeeecCCceEEEEEecCCcccc-cCh----hhHHHHHHHHH
Q 046900 320 SMLSNKKFTENYIKTNRERL-QKRYQMIIEGL---RSAGIECLKGNAGLFCWMNLSPLLEE-QTR----EGELALWDSML 390 (442)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~-~~~~~~l~~~L---~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~----~~~~~l~~~l~ 390 (442)
+.|+-.. + ....+.. ++.-+++.+.| .++++......-|+++-+++...... ..+ .....+...++
T Consensus 335 a~L~~l~---~--~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (456)
T PRK07480 335 ANLRILR---D--EGIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCF 409 (456)
T ss_pred HHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHH
Confidence 6665211 1 0111222 12223333333 33332222234456777776321110 000 01245566676
Q ss_pred HcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 391 HEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 391 ~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
++ ||++.+. ...+|++.. .++++++++++++|.+++.+..+
T Consensus 410 ~~-Gll~~~~-------~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 410 AN-GLIMRAV-------GDRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred HC-CcEEeec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 66 9999752 146899876 45899999999999999987643
No 344
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.55 E-value=9.3e-14 Score=129.60 Aligned_cols=186 Identities=21% Similarity=0.308 Sum_probs=131.0
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH--hHhhhcCc
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR--DLRWRTGI 167 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~--~~~~~~G~ 167 (442)
.|+......+|++.+++.++ .+..+++.+++.+..++++++++|++.|++..++|..... ......|+
T Consensus 24 ~Yg~D~~~~~l~~~i~~l~g----------~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ga~~~~~G~ 93 (290)
T PF01212_consen 24 AYGEDPTTARLEERIAELFG----------KEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETGAIEELSGA 93 (290)
T ss_dssp CTTSSHHHHHHHHHHHHHHT----------SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTTHHHHHTTC
T ss_pred ccCCChhHHHHHHHHHHHcC----------CCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccchhhHhcCc
Confidence 47766667788888888775 4566789999999999999999999999999997653322 22224899
Q ss_pred EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCC-CCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 168 KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNP-LGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 168 ~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NP-tG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
++++++.++.+ .+|+++|++.+.....+..++++|++++|+|- -|.++|.+++++|.++|++||+.++.|.+-....
T Consensus 94 ~~~~l~~~~~G--~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a 171 (290)
T PF01212_consen 94 KLIPLPSDDDG--KLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANA 171 (290)
T ss_dssp EEEEEBECTGT--BB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHH
T ss_pred EEEECCCcccC--CCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHh
Confidence 99999976523 58999999999875434457899999999996 4899999999999999999999999999943111
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHH
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVV 298 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~ 298 (442)
. .....++.++... -. ++.-|++|.+|+++ |-+++-++.++
T Consensus 172 ~-~~~~~~~~e~~~~------~D-~v~~~~tK~~g~~~---Gavl~~~~~~i 212 (290)
T PF01212_consen 172 A-AALGVSLAEIAAG------AD-SVSFGGTKNGGAPG---GAVLAGNKEFI 212 (290)
T ss_dssp H-CHHHHHHHHHHTT------SS-EEEEETTSTT-SSS---EEEEEESHHHH
T ss_pred h-hcccccHHHHhhh------CC-EEEEEEEccccccc---ceEEEechHHH
Confidence 0 0112244455432 22 34468999988766 55544455533
No 345
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.53 E-value=1.2e-11 Score=122.54 Aligned_cols=292 Identities=16% Similarity=0.189 Sum_probs=169.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC------hHHhHhhhcCcEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPG------FDRDLRWRTGIKIV 170 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~------~~~~~~~~~G~~v~ 170 (442)
+..+++.+|++++ .+..+++++++.++.+++.+ +.+||+|++....|.. +...++ ..|++++
T Consensus 124 ~~~le~~lA~l~g----------ae~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e~v~~ggs~~i~~~~~-~~G~~~~ 191 (454)
T TIGR00474 124 YSHVEGLLCELTG----------AEDALVVNNNAAAVLLALNT-LAKGKEVIVSRGELVEIGGSFRIPDVME-QSGAKLV 191 (454)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHH-hCCcCEEEECCChhhhhcchhhHHHHHH-HcCCEEE
Confidence 4677888888765 33456777888889888855 5799999999866432 223455 3899999
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC--C--cCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPL--G--ATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPt--G--~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
.++.+. ..|++++++++.+ ++++|++.+++|++ | .+.+ +++|+++|+++|+++++|...+.+.
T Consensus 192 ~v~~~~----~~~l~dle~aI~~------~T~lv~~~h~sN~~~~G~~~~~d---l~~I~~la~~~g~~vivD~~sG~l~ 258 (454)
T TIGR00474 192 EVGTTN----RTHLKDYEDAITE------NTALLLKVHTSNYRIVGFTEEVS---IAELVALGREHGLPVMEDLGSGSLV 258 (454)
T ss_pred EeCCCC----CCCHHHHHHhcCc------CCEEEEEEccCcccccCCCCCCC---HHHHHHHHHHcCCeEEEECCCcccc
Confidence 987643 1478999998865 88999999999995 6 3556 8889999999999999998644321
Q ss_pred ----CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc--cCCCcHHH----HH
Q 046900 247 ----FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS--FTLISSQT----QY 316 (442)
Q Consensus 247 ----~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~----q~ 316 (442)
|+-...+.+..... .+--+++.|.+|.+|-| ..|++++. +.+.+.+++..- ...+.... +.
T Consensus 259 ~~~~~gl~~~p~~~~~~~------~GaDiv~fSg~K~LgGp--~~G~i~g~-~~~i~~l~~~~l~r~lr~~k~~la~l~~ 329 (454)
T TIGR00474 259 DLSRYGLPDEPTVQEVIA------AGVDLVTFSGDKLLGGP--QAGIIVGK-KELIERLKKNPLTRALRVDKLTLAALEA 329 (454)
T ss_pred cchhccCCCCcccccHhH------cCCCEEEecCccccCCC--eEEEEEEC-HHHHHhhhhchhHHHHhhChHHHHHHHH
Confidence 10000111112211 13347889999998534 48999985 444444332110 01122222 22
Q ss_pred HHHHHhcCch-hH----HHHHHHHHHHHHHHHHHHHHHHHhC---CC--eeecCC----ceEEEEEecCCcccc--cChh
Q 046900 317 LLASMLSNKK-FT----ENYIKTNRERLQKRYQMIIEGLRSA---GI--ECLKGN----AGLFCWMNLSPLLEE--QTRE 380 (442)
Q Consensus 317 ~~~~~l~~~~-~~----~~~~~~~~~~~~~~~~~l~~~L~~~---g~--~~~~~~----~g~~~~~~~~~~~~~--~~~~ 380 (442)
.+..++...+ |. .+.+....+...++...+.+.|++. ++ ++.+.. ||-+--..+|...-. ....
T Consensus 330 ~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~ 409 (454)
T TIGR00474 330 TLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGL 409 (454)
T ss_pred HHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCC
Confidence 2223333211 11 1222333456666777888888662 22 222221 221111112211000 0001
Q ss_pred hHHHHHHHHHHcCc--EEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHH
Q 046900 381 GELALWDSMLHEVK--LNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRI 430 (442)
Q Consensus 381 ~~~~l~~~l~~~~g--i~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l 430 (442)
.+.++.+.|. +.. |..+ -.++.+.|-+.++.+++++..+++|
T Consensus 410 ~~~~l~~~lr-~~~~~ii~r-------~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 410 SAEKLEARLR-ELPPPIIGR-------IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred CHHHHHHHHh-cCCCCEEEE-------EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 2567776664 424 3333 2356788888888888888887765
No 346
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.53 E-value=3.8e-12 Score=123.70 Aligned_cols=283 Identities=12% Similarity=0.099 Sum_probs=168.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCC-CcEEEe-cChHHHHHHHHHhhcCCCCeEEEcCCCCcC-hHHhHhhh-cCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDL-NRIVVT-AGATAANELLTFILADPGDALLVPTPYYPG-FDRDLRWR-TGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~-~~i~~t-~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~~-~G~~v~~v 172 (442)
+.+.|+.++++++ ++. .+|+++ +++|.+++.++..++.+ +.+++..-.|.. +...+..+ .+.++..+
T Consensus 43 ~~~~r~~l~~l~~--------~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~ 113 (361)
T TIGR01366 43 VGRVREGLAELFS--------LPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIV 113 (361)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccCCceEE
Confidence 4667777777765 433 478886 55999999999998743 333333333432 22333311 12355566
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+.+.. ..++.+ + ..++++|.++..+|.||.+.|.++ | ++++|+++|+|.+.+- +. ..
T Consensus 114 ~~~~~--~~~~~~-----~------~~~~~lV~~~h~et~tG~~~pi~~---I---~~~~g~~~iVDavqs~---g~-~~ 170 (361)
T TIGR01366 114 TADPG--SAPEPQ-----A------DPGVDVIAWAHNETSTGVAVPVRR---P---EGSDDALVVIDATSGA---GG-LP 170 (361)
T ss_pred ecCCC--CCCCCc-----c------CCCCCEEEEcccCCccceeccccc---c---cccCCCeEEEEcCccc---cC-CC
Confidence 55432 123321 1 237899999999999999999544 3 4789999999999883 32 23
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc-----------------------cccCC
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM-----------------------SSFTL 309 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~-----------------------~~~~~ 309 (442)
..+.. -+ +++.|..|.+|.+|- ++.++++++.+ +.++.. .+++.
T Consensus 171 idv~~--~D---------~~~~s~~K~lg~~~G-l~~~~~s~~~~-~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~t 237 (361)
T TIGR01366 171 VDIAE--TD---------VYYFAPQKNFASDGG-LWLAIMSPAAL-ERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNT 237 (361)
T ss_pred CCHHH--CC---------EEEEEchhhcCCCCc-eEEEEECHHHH-hhhhcccCCCCCCchhhhHHHHHhccccCCCCCC
Confidence 34433 12 577899999987752 56656644333 222210 11122
Q ss_pred CcHHHHHHHHHHhcCchhHHHH--HHHHHHHHHHHHHHHHHHHHhCC-Ceeec-CC---ceEEEEEecCCcccccChhhH
Q 046900 310 ISSQTQYLLASMLSNKKFTENY--IKTNRERLQKRYQMIIEGLRSAG-IECLK-GN---AGLFCWMNLSPLLEEQTREGE 382 (442)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~g-~~~~~-~~---~g~~~~~~~~~~~~~~~~~~~ 382 (442)
.+.....++.++++ ++.+. ++...++.++..+++.+.+.+.+ ++... .. ......+.+++.. +.
T Consensus 238 p~i~~i~~l~~al~---~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~------~~ 308 (361)
T TIGR01366 238 PAIATLALLAEQID---WMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDI------DA 308 (361)
T ss_pred chHHHHHHHHHHHH---HHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCcc------CH
Confidence 22222223333333 22221 45556777888888999998875 44432 11 1111223333322 25
Q ss_pred HHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 383 LALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 383 ~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
.++.+.|.++ ||.+.+|... ...+.+|+|+. ..+.++++++++.|++++++
T Consensus 309 ~~v~~~L~~~-gI~i~~~~~~--l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 309 ATVAKILRAN-GIVDTEPYRK--LGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred HHHHHHHHHC-CCeeccCccc--cCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 6677777555 9999876422 23468999986 33899999999999998765
No 347
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.53 E-value=2.4e-11 Score=121.43 Aligned_cols=316 Identities=12% Similarity=0.072 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHHhCCCCccCC--CcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcC-------
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDL--NRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTG------- 166 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~--~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G------- 166 (442)
.+.+..+|+.+.+.... ... ..+++++++++|++.+++... ...+.|+...-+|.+....+....|
T Consensus 100 ~~~~~~lAe~L~~~~p~---~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~ 176 (459)
T PRK06931 100 TPLKDAFSEYLLSLLPG---QGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNA 176 (459)
T ss_pred CHHHHHHHHHHHHhCCC---ccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccC
Confidence 46666777777654210 011 124666899999998877542 2346788888888776543321111
Q ss_pred -----cEEEEEecCCCC--CCc----CCHHHHHHHHHHHHh----cCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHH
Q 046900 167 -----IKIVPIHCDSSN--NFQ----ITPQALEAAYKEAES----KDMRVRGVLITNPSNPLGATI-QRSVLEELLDFAT 230 (442)
Q Consensus 167 -----~~v~~v~~~~~~--~~~----~d~~~l~~~l~~~~~----~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~ 230 (442)
..+..+|..... .|. -+.+.+++.+.+... ...++.++++..-..-.|.+. +.+-++++.++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~ 256 (459)
T PRK06931 177 VNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQ 256 (459)
T ss_pred CCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 112223221110 011 123444333332221 123455555543344456654 6677999999999
Q ss_pred hcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccC
Q 046900 231 RKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFT 308 (442)
Q Consensus 231 ~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~ 308 (442)
+||+++|.||+...+...|..+ ....+. ..+. +-+++|.+| .|+.+|.+++. +.+ +.+.. ....+
T Consensus 257 ~~g~LlI~DEV~tGfGRtG~~~-a~~~~g------v~PD---ivt~gK~l~-gG~Pi~av~~~-~~~-~~~~~~~~~~T~ 323 (459)
T PRK06931 257 KHGILLIVDEVQAGFARTGKMF-AFEHAG------IEPD---IIVMSKAVG-GGLPLAVLGIK-KEF-DAWQPGGHTGTF 323 (459)
T ss_pred HcCCEEEEecchhcCCcCchHH-HhhhcC------CCCC---EEEeccccc-CCcceeeeeeH-HHH-hhccCCCCCCCC
Confidence 9999999999998765444311 111111 1122 346799998 88999988874 444 33321 22234
Q ss_pred CCcHHHHHHHHHHhcC---chhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccc--------c
Q 046900 309 LISSQTQYLLASMLSN---KKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEE--------Q 377 (442)
Q Consensus 309 ~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~--------~ 377 (442)
..++++.+++.+.|+. .+. .++.+++-+.+++.. .+...++++......-|+++.+++...... .
T Consensus 324 ~gnpla~aaala~L~~l~~~~l-~~~~~~~G~~l~~~L---~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~ 399 (459)
T PRK06931 324 RGNQLAMATGLTTLKILKEENL-AQNAAERGEWLKAQL---AELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPA 399 (459)
T ss_pred CCCHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHH---HHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCc
Confidence 5677777766666652 221 222333333332222 222223343223334566777776421100 0
Q ss_pred ChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 378 TREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 378 ~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
...-...+...++++ ||++.++..+ ...+|+..+ .++++++++++++|.+++.+.-
T Consensus 400 ~~~~~~~~~~~~~~~-Gvl~~~~~~~----~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 400 DGELAAAIQKACFEN-GLLLERGGRN----GNVVRLLPPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred cHHHHHHHHHHHHHC-CcEEeecCCC----CCEEEEECCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 111245677777766 9999874321 356888776 4499999999999999998754
No 348
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.53 E-value=7e-11 Score=106.08 Aligned_cols=281 Identities=16% Similarity=0.188 Sum_probs=189.4
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCC-CcC-hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPY-YPG-FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~-y~~-~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
.++...++.+++.++..++.|||.|++-.-+ |.. +.+..+ +.|++|..++.+. +-...++.+.+.+.++ +
T Consensus 71 f~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~-r~ga~V~~v~~~~--G~~~~le~i~~~lsqh-----~ 142 (385)
T KOG2862|consen 71 FVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCAR-RYGAEVDVVEADI--GQAVPLEEITEKLSQH-----K 142 (385)
T ss_pred EEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHH-hhCceeeEEecCc--ccCccHHHHHHHHHhc-----C
Confidence 4555558889999999999999999976654 443 345555 6999999998775 4458899999999874 8
Q ss_pred eeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccC
Q 046900 201 VRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDL 280 (442)
Q Consensus 201 ~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~ 280 (442)
+++++++.-...||+.-+ -+..+-++|++|++++++|.+-+ .++.+|. ++. .+.-+....--|++
T Consensus 143 p~~vfv~hgdsSTgV~q~--~~~~~g~lc~k~~~lllVD~VaS---lggt~F~----mDe------wgVDvaytgSQKaL 207 (385)
T KOG2862|consen 143 PKAVFVTHGDSSTGVLQD--LLAISGELCHKHEALLLVDTVAS---LGGTEFE----MDE------WGVDVAYTGSQKAL 207 (385)
T ss_pred CceEEEEecCccccccch--HHHHHHHHhhcCCeEEEEechhh---cCCccce----ehh------hcccEEEecchhhc
Confidence 899999998899999865 24455677889999999999977 3444331 222 23334445556888
Q ss_pred CCCCceeEEEeecCHHHHHHHHHc--------------cccCC-----------CcHHHHHHHHHHhcCchhHHHHHHHH
Q 046900 281 GLPGFRVGTIYSYNDKVVTTARRM--------------SSFTL-----------ISSQTQYLLASMLSNKKFTENYIKTN 335 (442)
Q Consensus 281 g~~G~RiG~i~~~~~~~~~~~~~~--------------~~~~~-----------~s~~~q~~~~~~l~~~~~~~~~~~~~ 335 (442)
|.|. .++-+.. .+...+.++.. ..+|. .+....+.+.++|+. ..++-+++.
T Consensus 208 ~aP~-GLsiisf-S~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~--I~eeGL~~~ 283 (385)
T KOG2862|consen 208 GAPA-GLSIISF-SDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALAL--IAEEGLENS 283 (385)
T ss_pred CCCC-Ccceeec-CHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHH--HHHHHHHHH
Confidence 7442 3455655 44444444431 12222 233444555555553 335567778
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeecC----CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEE
Q 046900 336 RERLQKRYQMIIEGLRSAGIECLKG----NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWF 411 (442)
Q Consensus 336 ~~~~~~~~~~l~~~L~~~g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~i 411 (442)
.++-++..+++...|+++|++.... .-...-.+.+|... |..+++.++..++++.+.-|- +...+..+
T Consensus 284 ~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gv------Dw~dVv~~~~~~~~vei~ggl--g~~~gKv~ 355 (385)
T KOG2862|consen 284 WRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGV------DWKDVVAYAMSHYVVEIGGGL--GPTVGKVF 355 (385)
T ss_pred HHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCC------CHHHHHHHHHHhcCEEecccc--CCCcccEE
Confidence 8888888999999999988775431 11112234556544 367888888899788776543 33345789
Q ss_pred EEEee--cCCHHHHHHHHHHHHHHHHHHH
Q 046900 412 RVCFA--NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 412 Rls~~--~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
||++- +.+.|.++..++.|+..+.+.+
T Consensus 356 RIGl~gcna~~e~i~~v~~ll~~alq~~~ 384 (385)
T KOG2862|consen 356 RIGLLGCNANVEYIDNVVELLKLALQRKK 384 (385)
T ss_pred EEEEeeccCCcHHHHHHHHHHHHHHhhcc
Confidence 99873 3477889999999998887643
No 349
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.52 E-value=4.3e-12 Score=130.00 Aligned_cols=160 Identities=20% Similarity=0.249 Sum_probs=112.4
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh-HhhhcCcEEEEEecCCCCCCc----CCH-----HHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD-LRWRTGIKIVPIHCDSSNNFQ----ITP-----QALEA 189 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~~G~~v~~v~~~~~~~~~----~d~-----~~l~~ 189 (442)
...-+++||+|.++..++.+++.+||.||++..||-+.... +.+ .|+.+++++... +.|+ +++ +.+++
T Consensus 190 d~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiL-sGa~PVYl~P~~-n~~Gi~g~I~~~~~~~~~i~~ 267 (720)
T PRK13578 190 DKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQ-AGATPVYLETAR-NPFGFIGGIDAHCFDEEYLRE 267 (720)
T ss_pred CceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHH-cCCeEEEeeccc-cccCCcCCCChHHccHHHHHH
Confidence 35689999999999999999999999999999999998875 664 899999987554 2343 344 45888
Q ss_pred HHHHHH-h--cC-CceeEEEEeCCCCCCCcCCCHHHHHHHHHH-HHhcCcEEEEeccCCcCC-CCCC--Ccc-cHHHHHh
Q 046900 190 AYKEAE-S--KD-MRVRGVLITNPSNPLGATIQRSVLEELLDF-ATRKNIHLVSDEIYSGSA-FSSS--EFV-SIAEILE 260 (442)
Q Consensus 190 ~l~~~~-~--~~-~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~-~~~~~~~vi~De~y~~~~-~~~~--~~~-s~~~~~~ 260 (442)
+++++. + .. ...+++++++|+. .|.+++ +++|++. ++.++ .|++||+|+... |... .++ +..+...
T Consensus 268 ~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~Ga 342 (720)
T PRK13578 268 QIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNE 342 (720)
T ss_pred HHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCC
Confidence 887651 1 01 1258899999887 699988 6777777 56667 899999998532 3221 011 1122222
Q ss_pred hhcCCCCCcEEEEecCcccCCCCCce-eEEEeec
Q 046900 261 ARQYKDSERVHIVYSLSKDLGLPGFR-VGTIYSY 293 (442)
Q Consensus 261 ~~~~~~~~~vi~~~S~SK~~g~~G~R-iG~i~~~ 293 (442)
+ ...++++.|.+|.+ +++- .+++...
T Consensus 343 D-----~p~i~v~QStHKtL--~alTQaS~LHvk 369 (720)
T PRK13578 343 N-----DPGIFVTQSVHKQQ--AGFSQTSQIHKK 369 (720)
T ss_pred C-----CCCeEEEEChhhcc--hhhhhHhhhhcC
Confidence 1 24578899999987 4443 3456553
No 350
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=5.2e-13 Score=125.26 Aligned_cols=298 Identities=18% Similarity=0.187 Sum_probs=192.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS 176 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~ 176 (442)
+.++.+.+|+|++ .++-+++..| -......+.+|+.||.-|+-..-.+..+...+++ .|+.+..+..+
T Consensus 184 hkelE~l~A~f~g---------~e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRL-SgAtiRVfkHN- 251 (519)
T KOG1357|consen 184 HKELEELVARFLG---------VEDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHASLITGARL-SGATTRVFRHN- 251 (519)
T ss_pred HHHHHHHHHHhcC---------CcceEEEecc-ccccccCcceeecCCcceeeccccchheeccccc-cCceEEEEecC-
Confidence 4566777777765 3566777777 5556677788999999999999999999988886 89988877654
Q ss_pred CCCCcCCHHHHHHHHHHHHhcC----C-ceeEEEEe--CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 177 SNNFQITPQALEAAYKEAESKD----M-RVRGVLIT--NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 177 ~~~~~~d~~~l~~~l~~~~~~~----~-~~~~v~l~--~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
|+..||+.|++.-..+ + ..|.++++ .-...-|.+.. +.+++.+++++..+++.||+++-...+.
T Consensus 252 ------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~g~ 322 (519)
T KOG1357|consen 252 ------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAMGA 322 (519)
T ss_pred ------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccccEEEEeeccccccccCC
Confidence 6788999888764322 1 22333333 22346666655 7888999999999999999999655431
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc-----CCCcHHHHHHHHHH--h
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF-----TLISSQTQYLLASM--L 322 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~-----~~~s~~~q~~~~~~--l 322 (442)
. -..+..+. +.+..+..|.+++|.|.||.+| ||+.+ ++.+.+.++..... ...++++|.....+ +
T Consensus 323 t-Grgvce~~---g~d~~dvDImMGtftKSfga~G---Gyiag-sk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i 394 (519)
T KOG1357|consen 323 T-GRGVCEYF---GVDPEDVDIMMGTFTKSFGAAG---GYIAG-SKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHI 394 (519)
T ss_pred C-Ccceeecc---CCCchhheeecceehhhccccc---ceecC-cHHHHhhhccCCCceeecccCChHHHHHHHHHHHhh
Confidence 1 11111111 1122356678899999999777 89888 66777776653322 22234555554333 2
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEe--cCCcccccChhhHHHHHHHHHHcCcEEEeCC
Q 046900 323 SNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMN--LSPLLEEQTREGELALWDSMLHEVKLNISPG 400 (442)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg 400 (442)
...+. .+..++..+++++++.++...|++.|+-+...+....+-+- .+.- -..+-++|+++ +|.+.-+
T Consensus 395 ~G~dg-t~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpVvplll~~~~k--------~~~f~r~~l~~-nigvVvv 464 (519)
T KOG1357|consen 395 MGEDG-TNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPVVPLLLYGPAK--------IVAFSREMLER-NIGVVVV 464 (519)
T ss_pred cCCCc-ccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCcceeeecCccc--------ccHHHHHHHhc-CceEEEE
Confidence 21111 23356677889999999999999988887765544222221 1211 23455677776 6665533
Q ss_pred CCCCC--CCCCEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 401 SSCHC--SEPGWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 401 ~~f~~--~~~~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
. |.. -..+.+|++.+ ..+.|+++++++.+.++-
T Consensus 465 g-fPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 465 G-FPATPLLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred e-CCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 2 332 12356788776 337899999998887654
No 351
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.48 E-value=1.2e-11 Score=126.72 Aligned_cols=167 Identities=16% Similarity=0.162 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCC
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS 177 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~ 177 (442)
.+..+..|+.++ ....-+++||+|.++..++.+++.+||.|+++..||-+...++.+ .|+.+++++...
T Consensus 198 ~eAe~~AA~~fg---------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLil-sga~PVYl~P~r- 266 (714)
T PRK15400 198 KEAEEYIARVFN---------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMM-SDVTPIYFRPTR- 266 (714)
T ss_pred HHHHHHHHHHhC---------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHH-cCCeEEEecccc-
Confidence 444455555543 234689999999999999999999999999999999998888885 999999987543
Q ss_pred CCCc----CC-----HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC-C
Q 046900 178 NNFQ----IT-----PQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA-F 247 (442)
Q Consensus 178 ~~~~----~d-----~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~-~ 247 (442)
+.|+ ++ .+.+++.+++.... .+++++++++|+. .|.+++ +++|++.|..++ |++||+|+... |
T Consensus 267 n~~Gi~g~I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F 339 (714)
T PRK15400 267 NAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNF 339 (714)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCccc-cCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEEccchhhhcc
Confidence 2332 34 78999999865321 2334789998865 799998 566777776776 68999998632 3
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV 287 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri 287 (442)
.. .+.....+... .+..+.++++.|.+|.+ +|+.-
T Consensus 340 ~p-~~~~~sam~~g--a~~~~~i~vtQStHKtL--~alTQ 374 (714)
T PRK15400 340 SP-IYEGKCGMSGG--RVEGKVIYETQSTHKLL--AAFSQ 374 (714)
T ss_pred Cc-ccCCcChhhcC--CCCCCceEEEEchhhcc--cchhH
Confidence 22 12111112110 01125568899999987 44433
No 352
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.46 E-value=3.7e-11 Score=119.43 Aligned_cols=335 Identities=12% Similarity=0.164 Sum_probs=172.7
Q ss_pred CCCCCCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|..+.....+||+..+. ..+ ..+.+.+.+.+..+. ...|.. ....+-.+|+.+.+...
T Consensus 40 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~------------~~~~~~---~~~~~~~la~~l~~~~p-- 102 (431)
T PRK06209 40 AHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQD------------GCNFTR---PSAIELDAAESFLELID-- 102 (431)
T ss_pred CEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHh------------CcCCCC---CCHHHHHHHHHHHHhCC--
Confidence 344445567788887543 233 235555555544321 111221 12333345555554321
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhcC-CC-CeEEEc-CCCCcChHHhH----hhhcCc------EEEEEecCCCCCCcC
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILAD-PG-DALLVP-TPYYPGFDRDL----RWRTGI------KIVPIHCDSSNNFQI 182 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~~-~g-d~Vl~~-~p~y~~~~~~~----~~~~G~------~v~~v~~~~~~~~~~ 182 (442)
..+.+++++++++|++.+++.... .| ..|+.. .-+|..+.... ....|. .+..++ + -
T Consensus 103 ---~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~-~ 172 (431)
T PRK06209 103 ---GADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR------Y-N 172 (431)
T ss_pred ---ccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC------C-C
Confidence 136899999999999998875421 23 345443 22222211100 000111 011111 1 2
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhh
Q 046900 183 TPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEAR 262 (442)
Q Consensus 183 d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~ 262 (442)
|++.+++.+++. ..++.+ ++.-|- .|...+.+.+++|.++|++||+++|+||++..+.+.+ ........
T Consensus 173 d~~~l~~~l~~~---~~~~aa-vi~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~---~g~~~~~g-- 241 (431)
T PRK06209 173 DIASLEALFEDH---PGRIAC-VILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM---RGAQKLYG-- 241 (431)
T ss_pred CHHHHHHHHHhC---CCCEEE-EEEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc---chhhHHhC--
Confidence 789999988642 224444 444553 2346678889999999999999999999987654321 11111110
Q ss_pred cCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHH--HHH--------ccccCCCcHHHHHHHHHHhcCchhHHHHH
Q 046900 263 QYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTT--ARR--------MSSFTLISSQTQYLLASMLSNKKFTENYI 332 (442)
Q Consensus 263 ~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~--~~~--------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~ 332 (442)
. .++ +.+++|++| .|+.+|++++ ++.+.+. +.. ..+.+..++++..++.+.|+.. ++
T Consensus 242 -v-~PD----i~t~gK~lg-gG~p~~av~~-~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i---~~-- 308 (431)
T PRK06209 242 -I-VPD----LSCFGKALG-NGFAVSALAG-KREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIY---RD-- 308 (431)
T ss_pred -C-Ccc----eeeehhhhc-CCcccEEEEE-HHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHH---hc--
Confidence 0 112 367899998 7899999999 5566654 211 1112333445544444444321 11
Q ss_pred HHHHHHHHHHHHHHHHHH----HhCCCeeec-CCceEEEEEecCCcc-cccChhhHHHHHHHHHHcCcEEEeCCCCCCCC
Q 046900 333 KTNRERLQKRYQMIIEGL----RSAGIECLK-GNAGLFCWMNLSPLL-EEQTREGELALWDSMLHEVKLNISPGSSCHCS 406 (442)
Q Consensus 333 ~~~~~~~~~~~~~l~~~L----~~~g~~~~~-~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~ 406 (442)
....+.++++-+++.+.| .++++.... ..|.+....-+.... ......-...+...++++ ||.+.|
T Consensus 309 ~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~p~------- 380 (431)
T PRK06209 309 EDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRR-GVLMPS------- 380 (431)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHC-Cccccc-------
Confidence 012223333333333433 334544221 122222222111110 001111123667777776 997622
Q ss_pred CCCEEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 407 EPGWFRVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 407 ~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
++|+... +++++++++++|.+++...+
T Consensus 381 ----l~is~~h-t~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 381 ----LVVSYAH-GDADIERTIDAVHGALGVYR 407 (431)
T ss_pred ----ccccccC-CHHHHHHHHHHHHHHHHHHH
Confidence 5677555 89999999999999998764
No 353
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.45 E-value=6.4e-11 Score=121.34 Aligned_cols=158 Identities=15% Similarity=0.144 Sum_probs=108.9
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCc----CCH-----HHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQ----ITP-----QALEAA 190 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~----~d~-----~~l~~~ 190 (442)
...-+++||+|.++..++.+++.+||.|+++..||-+...++.+ .|+.+++++... +.|+ +++ +.+++.
T Consensus 211 d~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLil-sga~PVYl~P~~-n~~Gi~g~I~~~~~~~e~I~~~ 288 (713)
T PRK15399 211 EQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMM-SDVVPIWLKPTR-NALGILGGIPRREFTRDSIEEK 288 (713)
T ss_pred CcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHH-cCCeeEEecccc-cccCCcCCCChhhccHHHHHHH
Confidence 34689999999999999999999999999999999998888885 999999987543 2333 344 889999
Q ss_pred HHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE-EEeccCCcCC-CCCCCcccHHHHHhhhcCCCCC
Q 046900 191 YKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL-VSDEIYSGSA-FSSSEFVSIAEILEARQYKDSE 268 (442)
Q Consensus 191 l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v-i~De~y~~~~-~~~~~~~s~~~~~~~~~~~~~~ 268 (442)
+++... ..+++++++++|+. .|.+++ +++|++.| ++.+ ++||+|+... |.. .+.+...+... .....
T Consensus 289 i~~~p~-~~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~p-~~~~~sam~~~--~~aD~ 357 (713)
T PRK15399 289 VAATTQ-AQWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFHP-IYQGKSGMSGE--RVPGK 357 (713)
T ss_pred HHhCCC-cCCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccchhhhhcCc-ccCCcChhhCC--CCCCe
Confidence 987532 12457899999965 799998 55566666 4555 6999998632 322 12211122110 00123
Q ss_pred cEEEEecCcccCCCCCce-eEEEee
Q 046900 269 RVHIVYSLSKDLGLPGFR-VGTIYS 292 (442)
Q Consensus 269 ~vi~~~S~SK~~g~~G~R-iG~i~~ 292 (442)
.++++.|.+|.+ +|+. .+++..
T Consensus 358 ~i~~tQStHKtL--~alTQaS~iHv 380 (713)
T PRK15399 358 VIFETQSTHKML--AAFSQASLIHI 380 (713)
T ss_pred eeeeeeehhccc--cccchheeeee
Confidence 345588999987 4443 456655
No 354
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.40 E-value=2.6e-10 Score=110.20 Aligned_cols=295 Identities=13% Similarity=0.108 Sum_probs=179.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc-CCCCeEEEcCCCCcCh-H-HhHhhhcCc-EEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA-DPGDALLVPTPYYPGF-D-RDLRWRTGI-KIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~Vl~~~p~y~~~-~-~~~~~~~G~-~v~~v 172 (442)
..++-+.+.+.+.+.++ .+.+.+-++++.|+|.+++.++..|+ ++|+.|++.. .|..- . +.++ +.|+ ++..+
T Consensus 37 F~~i~~e~~~~L~~l~~--~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~-~~g~~~v~~l 112 (374)
T TIGR01365 37 GKEKLAEAIKKTREMLG--VPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTK-QLKLPDVRVL 112 (374)
T ss_pred HHHHHHHHHHHHHHHhC--CCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHH-hcCCCCcEEE
Confidence 35666666666666654 11112235668889999999999998 5898898865 45443 4 5666 4888 46666
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
..+. +-.+|+++++. + +.|+++..-..||+..+. ++++..+ ++.++|+|.+-+ +++.++
T Consensus 113 ~~~~--g~~~~~~~ve~----------~-~~v~~vhnETSTGv~npv---~~i~~~~--~~~lliVDavSs---~g~~~l 171 (374)
T TIGR01365 113 EAEY--GKLPDLKKVDF----------K-NDVVFTWNGTTSGVRVPN---GDFIPAD--REGLTICDATSA---AFAQDL 171 (374)
T ss_pred cCCC--CCCCCHHHcCC----------C-CCEEEecCCCchheeccc---ccccccc--CCCcEEEEccch---hcCCCC
Confidence 5433 33578888872 1 125677777789999985 3433211 488999999987 444332
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc----------------------cccCCC
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM----------------------SSFTLI 310 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~----------------------~~~~~~ 310 (442)
.+..+ -+++.|.-|.+++|+ .+|+++++++.+.+ .+.. ......
T Consensus 172 -~~d~i-----------Dv~~tgsQK~L~~pp-Gls~v~vs~~Al~~-~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~ 237 (374)
T TIGR01365 172 -DYHKL-----------DVVTFSWQKVLGGEG-AHGMLILSPRAVAR-LESYTPAWPLPKIFRLTKGGKLNKKIFEGSTI 237 (374)
T ss_pred -ChhHC-----------cEEEEechhccCCCC-ceEEEEECHHHHHH-HhhcCCCCCChhhhccccccchhhhhhcCCCC
Confidence 33221 266788899998665 36788885444432 2210 001112
Q ss_pred cHHHHHHHHHHhcCchhHHH--HHHHHHHHHHHHHHHHHHHHHhCC-CeeecC----CceEEEEEecCCc-cc----ccC
Q 046900 311 SSQTQYLLASMLSNKKFTEN--YIKTNRERLQKRYQMIIEGLRSAG-IECLKG----NAGLFCWMNLSPL-LE----EQT 378 (442)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~----~~g~~~~~~~~~~-~~----~~~ 378 (442)
+++...++.+++....++.+ -++...++.+++.+.+.+.+++.| +..... .+.....+.++.. .+ ...
T Consensus 238 ~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~ 317 (374)
T TIGR01365 238 NTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQ 317 (374)
T ss_pred CChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchh
Confidence 23333333333332223222 267788888999999999999998 665542 2333344555332 10 001
Q ss_pred hhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEe-ecCCHHHHHHHHHHHHHH
Q 046900 379 REGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCF-ANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 379 ~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~-~~~~~e~i~~~l~~l~~~ 433 (442)
.+-..++.+.|.++ ||.+.+|..- .....|||+. +.++.++++.+++.|.=+
T Consensus 318 ~~~~~~~~~~l~~~-gi~i~~G~~~--~~~~~fRIg~~G~i~~~di~~l~~~l~~~ 370 (374)
T TIGR01365 318 ADFAKELISTLEKE-GVAYDIGSYR--DAPSGLRIWCGATVEKSDLECLCPWLDWA 370 (374)
T ss_pred hHHHHHHHHHHHHC-CEEEeccccc--cCCCceEEecCCcCCHHHHHHHHHHHHHH
Confidence 11145677777666 9999987642 2346799975 567899999999888644
No 355
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.40 E-value=4.2e-12 Score=117.15 Aligned_cols=320 Identities=15% Similarity=0.150 Sum_probs=193.6
Q ss_pred CCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH
Q 046900 80 KGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR 159 (442)
Q Consensus 80 ~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~ 159 (442)
+|+..+....-|+...=+.+|.+.||+|++ ..+.|+...| -.++..++.+++++||.|.+..-.......
T Consensus 124 yGvGsCGPrGFYGt~DvHldlE~~iakF~G---------~E~aivYs~g-F~ti~S~ipafsKrGDIi~~de~~nfaIq~ 193 (467)
T KOG1358|consen 124 YGVGSCGPRGFYGTIDVHLDLEKRIAKFMG---------TEDAIVYSYG-FSTIESAIPAFSKRGDIIFVDEAVNFAIQK 193 (467)
T ss_pred hCCCCcCCCcccccceeecccHHHHHHhhC---------Ccceeeeccc-cchhhhcchhhhccCcEEEEehhhhHHHHH
Confidence 566677777778887777899999999987 3455666555 556777889999999999998887777777
Q ss_pred hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH---hcCC---ceeEEEEe-CCCCCCCcCCCHHHHHHHHHHHHhc
Q 046900 160 DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE---SKDM---RVRGVLIT-NPSNPLGATIQRSVLEELLDFATRK 232 (442)
Q Consensus 160 ~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~---~~~~v~l~-~P~NPtG~~~~~~~l~~l~~~~~~~ 232 (442)
.++. ..-.++++.. .|++.++..+.+-. .+.+ .++..++. --.-+||.+.+ +.+|+++..+|
T Consensus 194 Glql-SRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Ky 262 (467)
T KOG1358|consen 194 GLQL-SRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP---LPEIVKLKNKY 262 (467)
T ss_pred HHhh-hhheeEEecC-------CCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc---cHHHHHHHhhh
Confidence 7664 5556666653 36677776664311 1111 22333333 33567999999 77778888899
Q ss_pred CcEEEEeccCCcCCCCC--CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc---
Q 046900 233 NIHLVSDEIYSGSAFSS--SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--- 307 (442)
Q Consensus 233 ~~~vi~De~y~~~~~~~--~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--- 307 (442)
...||.||.|+..+.+. .......... ..+.-++++|++-+++..| ||+++ +..+... +++...
T Consensus 263 k~RvildEs~SfG~lg~~GrGvteH~~v~------~~~iDiv~~sm~~alas~G---gFc~G-~~~i~~h-QrLSg~~Y~ 331 (467)
T KOG1358|consen 263 KFRVILDESLSFGVLGKTGRGVTEHFGVP------ITDIDIVTASMETALASGG---GFCAG-KSFIADH-QRLSGSGYC 331 (467)
T ss_pred eEEEEEecccccccccccCccccccCCCC------ccceeeeeecccccccccC---ceeec-ceeeEee-eecccccee
Confidence 99999999998554432 2111111111 1244577899999887666 88877 4443332 232222
Q ss_pred CC--CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCCccccc--ChhhH
Q 046900 308 TL--ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSPLLEEQ--TREGE 382 (442)
Q Consensus 308 ~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~--~~~~~ 382 (442)
+. .++....++...+.-.++ -..+.+.++..-..+...|... ++.+....-+..+.+.+....... ...--
T Consensus 332 fSAslPp~la~aa~~ai~i~~~----~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL 407 (467)
T KOG1358|consen 332 FSASLPPYLAGAAIKAILIEEW----NPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEKLL 407 (467)
T ss_pred eeccCchhhhhhHHHHHHHHhh----CcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchHHHHHHH
Confidence 11 122233333333332222 2334445555556666777654 566655444445555554422111 11123
Q ss_pred HHHHHHHHHcCcEEEeCCCCCCC----CCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 383 LALWDSMLHEVKLNISPGSSCHC----SEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 383 ~~l~~~l~~~~gi~v~pg~~f~~----~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
.++++..+.+ |+++.-...--. .-+..+||++. .+++|+++++.+.|+++...
T Consensus 408 ~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 408 EEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred HHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 5566666677 887764332211 11235999996 45999999999999987654
No 356
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.40 E-value=8e-10 Score=110.10 Aligned_cols=281 Identities=13% Similarity=0.146 Sum_probs=155.2
Q ss_pred CCcEEEecChHHHHHHHHHhhcC--------C------CCeEEEcCCCCcChHHhHhhhcCcEEE-----------EEec
Q 046900 120 LNRIVVTAGATAANELLTFILAD--------P------GDALLVPTPYYPGFDRDLRWRTGIKIV-----------PIHC 174 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~--------~------gd~Vl~~~p~y~~~~~~~~~~~G~~v~-----------~v~~ 174 (442)
.+.|+++++++++++.+++.... . ..+|+...-+|.+....+....|.... .++.
T Consensus 110 ~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08297 110 LPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDN 189 (443)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCC
Confidence 36899999999999999876520 1 257888888887765433211221100 0110
Q ss_pred CCCC-CC---c---C------CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEec
Q 046900 175 DSSN-NF---Q---I------TPQALEAAYKEAESKDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 175 ~~~~-~~---~---~------d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
.... .+ . . +++.+++.+.+ ...++.++++..-....|.+ .+.+-+++|.++|++||+++|.||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DE 266 (443)
T PRK08297 190 PKLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDE 266 (443)
T ss_pred CCCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 0000 00 0 0 23444555543 23456665555334445654 677779999999999999999999
Q ss_pred cCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHH-------HccccCCCcHH
Q 046900 241 IYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR-------RMSSFTLISSQ 313 (442)
Q Consensus 241 ~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~-------~~~~~~~~s~~ 313 (442)
++..+...|..+ ....+. ....++ +|+|.++ .| |.+.. + .+...+. ...+.+..+++
T Consensus 267 V~tGfGRtG~~~-a~~~~g------v~PDiv---~~gK~l~-~~---a~l~~-~-~i~~~~~~~~~~~~~~~~T~~gnpl 330 (443)
T PRK08297 267 VQTGVGLTGTAW-AYQQLG------VRPDIV---AFGKKTQ-VC---GIMAG-R-RVDEVEDNVFAVSSRINSTWGGNLV 330 (443)
T ss_pred hhhccCccchHH-HHHhcC------CCCCEE---Eeccccc-cc---ceecc-h-HHHHhhhhhccCccccCCCCCccHH
Confidence 998765444321 111111 012222 5799874 22 44443 3 2222211 12223445777
Q ss_pred HHHHHHHHhcC---chhHHHHHHHHHHHHHHHHHHHHHHHHhCC-Ce-eecCCceEEEEEecCCcccccChhhHHHHHHH
Q 046900 314 TQYLLASMLSN---KKFTENYIKTNRERLQKRYQMIIEGLRSAG-IE-CLKGNAGLFCWMNLSPLLEEQTREGELALWDS 388 (442)
Q Consensus 314 ~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (442)
+..++.+.|+- .+. .+...++-+.+++. +.+...+.. +. .... -|+++.++++.. .....++..
T Consensus 331 ~~aaa~a~L~~l~~~~l-~~~~~~~g~~l~~~---L~~l~~~~~~~~~~vrg-~G~~~~i~~~~~------~~~~~~~~~ 399 (443)
T PRK08297 331 DMVRARRILEVIEEDGL-VENAARQGEYLLAR---LEELAAEFPAVVSNVRG-RGLMCAFDLPTT------ADRDEVIRR 399 (443)
T ss_pred HHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHH---HHHHHHHCCCcceeeec-cceEEEEEecCH------HHHHHHHHH
Confidence 77766666652 221 12222222333222 222222232 21 2223 366777887542 124578888
Q ss_pred HHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 389 MLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 389 l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
++++ ||++.|+. ...+|++.+ .++++++++++++|.+++.++
T Consensus 400 l~~~-Gvl~~~~~------~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 400 LWEE-GVLVLPCG------ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred HHHC-CEEEecCC------CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 8766 99998742 245888654 348999999999999998754
No 357
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.37 E-value=1.6e-10 Score=112.38 Aligned_cols=258 Identities=19% Similarity=0.202 Sum_probs=161.9
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCcc---CCCcEEEecChHHHHHHHHHhhcC--------CC-----C-eEEEcCCC
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKF---DLNRIVVTAGATAANELLTFILAD--------PG-----D-ALLVPTPY 153 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~---~~~~i~~t~G~~~ai~~~~~~l~~--------~g-----d-~Vl~~~p~ 153 (442)
|.......++.+.+.+|+.+.+|.+... ....-++|+|+++++..++.+..+ .| . .|++.+-+
T Consensus 71 ~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a 150 (373)
T PF00282_consen 71 WEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA 150 (373)
T ss_dssp TTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS
T ss_pred cccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc
Confidence 4344567899999999999988743111 124688999999999877644321 12 2 46666768
Q ss_pred CcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcC
Q 046900 154 YPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN 233 (442)
Q Consensus 154 y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~ 233 (442)
|..+..++.. +|+.++.||+++ ++.+|+++|++.+.+...+|..+-+|+.+-.+..||.+=+ +++|+++|++++
T Consensus 151 H~S~~Kaa~~-lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~---l~~i~~i~~~~~ 224 (373)
T PF00282_consen 151 HYSIEKAARI-LGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP---LEEIADICEKYN 224 (373)
T ss_dssp -THHHHHHHH-TTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S---HHHHHHHHHHCT
T ss_pred ccHHHHhcce-eeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccC---HHHHhhhccccc
Confidence 9989999995 999999999987 5679999999999887665554545666777889999855 888899999999
Q ss_pred cEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHH-HHHHcccc-----
Q 046900 234 IHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVT-TARRMSSF----- 307 (442)
Q Consensus 234 ~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~-~~~~~~~~----- 307 (442)
+|+.+|.+|+...+-.+.......-.+ .-.=+..+++|.++ ....+|+++..++.... .+.....+
T Consensus 225 ~wlHVDaA~gg~~~~~~~~~~~~~gi~-------~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~ 296 (373)
T PF00282_consen 225 IWLHVDAAYGGSALLSPEYRHLLFGIE-------RADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGNDD 296 (373)
T ss_dssp -EEEEEETTGGGGGGHCTTGGGGTTGG-------GESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S-
T ss_pred eeeeecccccccccccccccccccccc-------cccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhcccc
Confidence 999999999973332222222111111 11123458999987 66789999987765432 22110111
Q ss_pred -------------CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec-CCce
Q 046900 308 -------------TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK-GNAG 363 (442)
Q Consensus 308 -------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~g 363 (442)
...|. ...++..++.-..+-.+.+++..+...+..+++.+.|++. ++++.. +.-+
T Consensus 297 ~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~ 366 (373)
T PF00282_consen 297 RESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLN 366 (373)
T ss_dssp SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSS
T ss_pred cccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCce
Confidence 11232 2222222222111223445666777778888999999887 577654 4444
No 358
>PLN02452 phosphoserine transaminase
Probab=99.36 E-value=3.1e-09 Score=102.77 Aligned_cols=330 Identities=14% Similarity=0.117 Sum_probs=192.8
Q ss_pred eeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecCh
Q 046900 50 VIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGA 129 (442)
Q Consensus 50 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~ 129 (442)
+++|+-+--.+|.+.++...+...+-.. .|.+-. .+.+. ..-..++-+.+.+.+.+.++ ++-+.+-+++..|+
T Consensus 8 ~~~f~pGP~~lp~~Vl~~~~~~~~~~~~--~g~s~~-~~sHR--s~~f~~i~~~~~~~L~~l~~--~p~~y~v~~l~Gsg 80 (365)
T PLN02452 8 VFNFSAGPATLPANVLAKAQAELYNWEG--SGMSVM-EMSHR--GKEFLSIIQKAEADLRELLD--IPDNYEVLFLQGGA 80 (365)
T ss_pred eEeeeCCCCCCCHHHHHHHHHHHhcccc--cCcccc-ccCCC--chHHHHHHHHHHHHHHHHhC--CCCCceEEEEeCcc
Confidence 5678777666666665555444321110 011000 11112 12234555566666666554 21112235566779
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEEEecCCCCCC--cCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 130 TAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVPIHCDSSNNF--QITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 130 ~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~v~~~~~~~~--~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
+.+++.+...|+.+|+++++..-++.+ +...++ ++|...+.... +.++| .+++++++. ..+.+.|.
T Consensus 81 t~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~-~~g~~~~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~v~ 150 (365)
T PLN02452 81 STQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAK-KYCKTNVIASG-KDEKYTKIPSVSEWEL--------TPDAKFVH 150 (365)
T ss_pred HHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHH-HhCCCcEEEec-CCCCCCCCCChHHcCC--------CCCCcEEE
Confidence 999999999999999999988766544 334455 36753333321 12222 345555421 23567777
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+|.....||+.+.. +.++. ++++|+|.+.+- .+. ...+..+ + ++ +.|..|.+|.+|
T Consensus 151 ~~hnETstGv~~~~--~~~i~------~~~lvVDa~Ss~---g~~-pidv~~~---------~-v~-~~saqK~lGP~G- 206 (365)
T PLN02452 151 ICANETIHGVEFKD--YPDVG------NVPLVADMSSNF---LSK-PVDVSKY---------G-VI-YAGAQKNVGPSG- 206 (365)
T ss_pred ECCCCCCCcEecCc--ccccC------CCeEEEECCccc---cCc-ccCHHHc---------C-EE-EEecccccCCCC-
Confidence 77777789996431 33332 379999999873 332 2333322 2 33 469999999888
Q ss_pred eeEEEeecCHHHHHHHHH--------------ccccCCCcHHHHHHHHHHhcCchhHHH--HHHHHHHHHHHHHHHHHHH
Q 046900 286 RVGTIYSYNDKVVTTARR--------------MSSFTLISSQTQYLLASMLSNKKFTEN--YIKTNRERLQKRYQMIIEG 349 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~--------------~~~~~~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~ 349 (442)
+|.+++.++.+ +.+.. ...+++.+.....++...++ |+.+ -++.+.++.+++.+++.+.
T Consensus 207 -l~~v~vr~~~l-~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~---~l~~~gGl~~~~~r~~~~a~~l~~~ 281 (365)
T PLN02452 207 -VTIVIIRKDLI-GNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFE---DLLAQGGLKAMEKRNIRKADLLYDA 281 (365)
T ss_pred -eEEEEEcHHHH-hhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHH---HHHHccCHHHHHHHHHHHHHHHHHH
Confidence 68888854433 22211 01112233334444444443 4333 3677888899999999999
Q ss_pred HHhC-CC-ee-ecC--CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHH
Q 046900 350 LRSA-GI-EC-LKG--NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTL 423 (442)
Q Consensus 350 L~~~-g~-~~-~~~--~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i 423 (442)
|++. |+ .. ..+ ...+.+.+.++... ...+|.+.+.++ |+...+|..-- .+ +|+|+- .++.+++
T Consensus 282 l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~------~~~~f~~~~~~~-g~~~~~G~r~~---gg-~R~s~yna~~~~~v 350 (365)
T PLN02452 282 IDESNGFYVCPVEKSVRSLMNVPFTLGGSE------LEAEFVKEAAKA-GMVQLKGHRSV---GG-MRASIYNAMPLAGV 350 (365)
T ss_pred HHhCCCcccCCCChHHhCCeEEEEEcCCch------hHHHHHHHHHHC-CCcccCCcccc---Cc-eEEECcCCCCHHHH
Confidence 9875 66 11 111 24456666666531 356777777555 99999987632 23 999975 5688989
Q ss_pred HHHHHHHHHHHHH
Q 046900 424 EVALKRIHNFMQK 436 (442)
Q Consensus 424 ~~~l~~l~~~l~~ 436 (442)
+.+++.++++-++
T Consensus 351 ~~L~~~m~~f~~~ 363 (365)
T PLN02452 351 EKLVAFMKDFQAK 363 (365)
T ss_pred HHHHHHHHHHHHh
Confidence 8888888887655
No 359
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.36 E-value=3.6e-10 Score=112.26 Aligned_cols=279 Identities=15% Similarity=0.140 Sum_probs=154.7
Q ss_pred CcEEEecChHHHHHHHHHhhcC--------------------------CC---CeEEEcCCCCcChHHhHhhhcCcE---
Q 046900 121 NRIVVTAGATAANELLTFILAD--------------------------PG---DALLVPTPYYPGFDRDLRWRTGIK--- 168 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~--------------------------~g---d~Vl~~~p~y~~~~~~~~~~~G~~--- 168 (442)
+.+++++++++|++.+++.... +| ..|+...-+|.+....+....|-.
T Consensus 123 ~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~ 202 (464)
T TIGR00699 123 DQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIH 202 (464)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence 6899999999999998876521 11 268888888877543322112211
Q ss_pred --------EEEEecCC-CCCCc-----------CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHH
Q 046900 169 --------IVPIHCDS-SNNFQ-----------ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLD 227 (442)
Q Consensus 169 --------v~~v~~~~-~~~~~-----------~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~ 227 (442)
+..+|... ...+. -+++.+++.+.++ +.++.+|++..-....|.+. +.+-+++|.+
T Consensus 203 ~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~ 279 (464)
T TIGR00699 203 KLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRD 279 (464)
T ss_pred ccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHH
Confidence 11112110 00000 1245566666532 23566666654466668776 5677999999
Q ss_pred HHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHH--Hcc
Q 046900 228 FATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR--RMS 305 (442)
Q Consensus 228 ~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~--~~~ 305 (442)
+|++||+++|.||++..+...|..+ ....+.- ..... +.+++|.+| .| |+++. .+.+.. .. ...
T Consensus 280 lc~~~g~lLI~DEV~tGfGrtG~~f-a~e~~gv----~~~PD---i~t~gK~lg-~g---G~~~~-~~~~~~-~~~~~~~ 345 (464)
T TIGR00699 280 ITKKHNVAFIVDEVQTGVGATGKFW-AHEHWNL----DDPPD---MVTFSKKFQ-TA---GYFFH-DPAFRP-NKPYRQF 345 (464)
T ss_pred HHHHcCCEEEEeeeeeCCCCCcchh-HHHhcCC----CCCCC---EEEehhhhc-cC---Ccccc-chhccC-CCCcccc
Confidence 9999999999999998765444311 1111100 00011 356899985 32 44444 222110 01 112
Q ss_pred ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh----CC--Ceee-cCCceEEEEEecCCcccccC
Q 046900 306 SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS----AG--IECL-KGNAGLFCWMNLSPLLEEQT 378 (442)
Q Consensus 306 ~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g--~~~~-~~~~g~~~~~~~~~~~~~~~ 378 (442)
+.+..++++..++.+.|+... + ....+..++.-+++.+.|++ +. +.-. ...-|+++-++++..
T Consensus 346 ~T~~gnp~~~aaa~a~L~~l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~----- 415 (464)
T TIGR00699 346 NTWMGDPSRALILREIIQEIK--R---KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE----- 415 (464)
T ss_pred cCCCCCHHHHHHHHHHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH-----
Confidence 223445666555554443211 0 11222222223333333333 22 1111 124677887887532
Q ss_pred hhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 379 REGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 379 ~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
.....+.+.++++ ||++.+. +...+||... .++++++++++++|.+++
T Consensus 416 -~~~~~i~~~~~~~-Gvl~~~~------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 416 -AKRDKLLKKARNN-GVNIGGC------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred -HHHHHHHHHHHHC-CcEEecC------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 1256788888777 9999763 2367999886 459999999999998763
No 360
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.35 E-value=8.1e-10 Score=118.21 Aligned_cols=286 Identities=15% Similarity=0.180 Sum_probs=176.9
Q ss_pred ccccCCCc-----chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCC--CCeEEEcCCCCcChHH
Q 046900 88 NALFQDYH-----GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADP--GDALLVPTPYYPGFDR 159 (442)
Q Consensus 88 ~~~Y~~~~-----g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~--gd~Vl~~~p~y~~~~~ 159 (442)
...|.|++ |..+..-.+...+.+..| +++.|+-+..+++++.+.++.++ ..+ +|+|++++-.|+....
T Consensus 105 ~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG----~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~ 180 (954)
T PRK05367 105 YTAYTPYQPEISQGRLEALLNFQTMVADLTG----LEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLD 180 (954)
T ss_pred hhccCCCChHHHHHHHHHHHHHHHHHHHHHC----CChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHH
Confidence 34566654 433333333333333333 78999999999999999888776 344 4899999999998776
Q ss_pred hHhh---hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE
Q 046900 160 DLRW---RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 160 ~~~~---~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v 236 (442)
.++. ..|++++.++.+.+ ++ . .++.++++.+| |-+|.+.+ +++|+++|+++|+++
T Consensus 181 v~~t~a~~~G~ev~~~~~~~d----~~--------~------~~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~ 238 (954)
T PRK05367 181 VLRTRAEPLGIEVVVGDAAKA----LD--------H------DDVFGVLLQYP-GTSGEVRD---YTALIAAAHARGALV 238 (954)
T ss_pred HHHHHHHhCCCEEEEecCccC----CC--------c------ccEEEEEEecC-CCCeeecc---HHHHHHHHHHcCCEE
Confidence 5432 37999999986531 11 0 14555666676 56999986 889999999999999
Q ss_pred EEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCccc-----CCCCCceeEEEeecCHHHHHHHH-Hccc----
Q 046900 237 VSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKD-----LGLPGFRVGTIYSYNDKVVTTAR-RMSS---- 306 (442)
Q Consensus 237 i~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~-----~g~~G~RiG~i~~~~~~~~~~~~-~~~~---- 306 (442)
++|-....+.. ..+..++.. -++++|..|. ||-|| .|++.+. +.+.+.+. +...
T Consensus 239 ~vda~~~Al~~----l~~pge~Ga---------Di~vgs~qkfg~P~g~GGP~--aGflavr-~~~~r~lpgrivG~s~d 302 (954)
T PRK05367 239 AVAADLLALTL----LTPPGEMGA---------DIAVGSAQRFGVPMGFGGPH--AAYFAVR-DAYKRSMPGRIVGVSVD 302 (954)
T ss_pred EEEehhhhccC----CCChhhcCC---------CEEEeeCcccCCCCCCCCCC--EEEEEEC-HHHHhhCCCCeeeeecc
Confidence 99875432221 123333433 3788888987 54454 8999984 44443321 1000
Q ss_pred -------------------c--CC---CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC-
Q 046900 307 -------------------F--TL---ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN- 361 (442)
Q Consensus 307 -------------------~--~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~- 361 (442)
. .+ ++.....++.+.+--..+...-+++..++......++.+.|++.|+++..+.
T Consensus 303 ~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~ 382 (954)
T PRK05367 303 AAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSF 382 (954)
T ss_pred cCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCC
Confidence 0 01 1111111222111000011234667778888888899999987787764332
Q ss_pred ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHH
Q 046900 362 AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIH 431 (442)
Q Consensus 362 ~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~ 431 (442)
.+ -+.++++. +..++.++|+++ ||.+.. . ..+.+|+|+.. -++++++.+++.|.
T Consensus 383 f~-~~~~~~~~--------~~~~i~~~l~~~-gi~~~~---~---~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 383 FD-TLTVEVGG--------DAAAVLARALAA-GINLRR---V---DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred CC-eEEEeCCC--------CHHHHHHHHHHC-Cceecc---c---cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 12 12233321 367888898777 998833 1 14579999872 28899999999997
No 361
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.33 E-value=5e-10 Score=119.30 Aligned_cols=275 Identities=14% Similarity=0.104 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCC--CeEEEcCCCCcChHHhHhh---hcCcEEEE
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPG--DALLVPTPYYPGFDRDLRW---RTGIKIVP 171 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~g--d~Vl~~~p~y~~~~~~~~~---~~G~~v~~ 171 (442)
.++++.||++++ ++++|+-++.++|.+.+.++.++ .++| |+|++++-.|+.+...++. ..|++++.
T Consensus 151 ~~~Qt~ia~LtG--------~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~ 222 (993)
T PLN02414 151 LNYQTMITDLTG--------LPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVV 222 (993)
T ss_pred HHHHHHHHHHhC--------CChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEE
Confidence 455566666654 78999999999999999887666 3444 7899999999998766543 26999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++.+.. + .. +..+-.+++.+|+ .+|.+.+ +++|+++|+++|+++++ .+... +-..
T Consensus 223 v~~~~~-----~------~~------~~~v~~vlvq~P~-~~G~v~d---v~~I~~~ah~~GaL~iV-aad~l---al~~ 277 (993)
T PLN02414 223 ADEKDF-----D------YS------SGDVCGVLVQYPA-TDGEVLD---YAEFVKNAHANGVKVVM-ATDLL---ALTM 277 (993)
T ss_pred ecchhh-----c------cc------cCceEEEEEecCC-CCeEEcC---HHHHHHHHHHcCCEEEE-EECHH---HhcC
Confidence 886431 1 00 0133344554554 4999977 88899999999999999 44332 1112
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccC---CCCCceeEEEeecCHHHHHHHH-Hccc---------------------
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDL---GLPGFRVGTIYSYNDKVVTTAR-RMSS--------------------- 306 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~---g~~G~RiG~i~~~~~~~~~~~~-~~~~--------------------- 306 (442)
..+..++.. -|++++..|.. |..|-+.||+.+.+ .+.+.+- +...
T Consensus 278 l~~pge~GA---------Di~vgsgqKwg~P~G~GGP~aGflavr~-~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqh 347 (993)
T PLN02414 278 LKPPGEWGA---------DIVVGSAQRFGVPMGYGGPHAAFLATSQ-EYKRLMPGRIIGVSVDSSGKPALRMAMQTREQH 347 (993)
T ss_pred CCCHhhccC---------cEEEECCCccccCCCCCCCCeeEEEECH-HHHhhCCCcccCcccCCCCCcccccccccccch
Confidence 223444433 37788888875 33455689999854 3333221 1000
Q ss_pred ----cCCCcHHHHHHHHHHhcCc---hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC-ceEEEEEecCCcccccC
Q 046900 307 ----FTLISSQTQYLLASMLSNK---KFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN-AGLFCWMNLSPLLEEQT 378 (442)
Q Consensus 307 ----~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~g~~~~~~~~~~~~~~~ 378 (442)
.++.+.-+..++.+.+... .+...-+++.+++..+...++.+.|.+.|+++..+. .+ -+.++++.
T Consensus 348 iRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~-~vt~~~~~------ 420 (993)
T PLN02414 348 IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFD-TVKVKCSD------ 420 (993)
T ss_pred hhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcC-eEEEecCC------
Confidence 0111111111222222110 000123566778888888899999988887765432 22 22334432
Q ss_pred hhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecC-CHHHHHHHHHHHHH
Q 046900 379 REGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANM-SEQTLEVALKRIHN 432 (442)
Q Consensus 379 ~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~-~~e~i~~~l~~l~~ 432 (442)
..++.++|.++ ||.++.- ..+.+|+|+... ++++|+.+++.|..
T Consensus 421 ---~~~v~~~L~~~-gI~l~~~------~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 421 ---ADAIADAAAKV-GINLRVV------DANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred ---HHHHHHHHHHC-CCeeEEe------cCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 46788888776 9977642 135699998722 88999999999963
No 362
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.32 E-value=1.8e-09 Score=104.38 Aligned_cols=292 Identities=14% Similarity=0.136 Sum_probs=167.1
Q ss_pred CCcEEEecChHHHHHHHHHhhc-------CCC-CeEEEcCCCCcChHH-hHhhhcC-------------cEEEEEecCCC
Q 046900 120 LNRIVVTAGATAANELLTFILA-------DPG-DALLVPTPYYPGFDR-DLRWRTG-------------IKIVPIHCDSS 177 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~-~~~~~~G-------------~~v~~v~~~~~ 177 (442)
-+.|++++|++++++.+++... +|. .+++.-..+|.+-.- .+.. .| ..+..+|....
T Consensus 105 l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv-~g~~~~~~~~~~~ll~~~~~~~~P~~ 183 (449)
T COG0161 105 LDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSV-GGPVALRHAFYDPLLPEVLHLPAPYA 183 (449)
T ss_pred ccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheec-cCchhhhhhhccccccCceecCCCcc
Confidence 4689999999999999887642 232 347777888855321 1111 12 11222222210
Q ss_pred ------CCCc----CCHHHHHHHHHHHHhcCCceeEEEEeCC-C-CCCCcCCCHHH-HHHHHHHHHhcCcEEEEeccCCc
Q 046900 178 ------NNFQ----ITPQALEAAYKEAESKDMRVRGVLITNP-S-NPLGATIQRSV-LEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 178 ------~~~~----~d~~~l~~~l~~~~~~~~~~~~v~l~~P-~-NPtG~~~~~~~-l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
+.+. -..++|++.+.+ +++..-+-++.-| . .-+|+.++.+. ++++.++|++||+++|.||+-..
T Consensus 184 y~~~~~~~~~~~~~~~a~~le~~i~~---~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tG 260 (449)
T COG0161 184 YRRGFFGEGDEEFAEAADELEALILE---HGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATG 260 (449)
T ss_pred cccCCCCCChHHHHHHHHHHHHHHHh---cCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeC
Confidence 1111 124566666665 3423334455556 3 44887765555 99999999999999999999988
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--ccc-----CCCcHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSF-----TLISSQTQYL 317 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~-----~~~s~~~q~~ 317 (442)
|..+|..|.. ... +..+. +-+++|.+.-.=+.+|.+++ .+.+.+.+..- ..+ ++.++++.++
T Consensus 261 FGRTG~~FA~----e~~---gi~PD---i~~~aKGLT~GY~Pl~a~l~-~~~I~~~~~~~~~~~f~HG~TYsghPlacAa 329 (449)
T COG0161 261 FGRTGKMFAC----EHA---GIVPD---ILCLAKGLTGGYLPLSAVLT-SDRIYEAFSDGDAGAFMHGHTYSGNPLACAA 329 (449)
T ss_pred CCcCchhhhh----hhc---CCCCC---eeeecccccccchhhHhHhh-hHHHHHHHhcccCCeeccCCccccCHHHHHH
Confidence 7766654321 111 00122 34678987522366777777 45566555432 211 3456666666
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCee--ecCCceEEEEEecCCcccccC---hhhHHHHHHHHH
Q 046900 318 LASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS-A-GIEC--LKGNAGLFCWMNLSPLLEEQT---REGELALWDSML 390 (442)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~--~~~~~g~~~~~~~~~~~~~~~---~~~~~~l~~~l~ 390 (442)
+.+-|+- +++ +...++.++.-.++.+.|++ + +... ..-.-|++.-+++........ ..-...+...++
T Consensus 330 Ala~L~i---~e~--e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~ 404 (449)
T COG0161 330 ALANLDI---LEE--EDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAAL 404 (449)
T ss_pred HHHHHHH---HHh--cCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHH
Confidence 5555442 111 12233334445555666654 1 1112 224567777777755433221 112445666665
Q ss_pred HcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 391 HEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 391 ~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
++ |+.++|.. ..+-++.. .++++++++.++++.+.++....
T Consensus 405 e~-Gl~iRp~g-------~~i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 405 ER-GLLIRPLG-------DVIYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred HC-CeEEeecC-------CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 66 99999951 23445543 34899999999999999987544
No 363
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.31 E-value=1.8e-09 Score=107.52 Aligned_cols=280 Identities=13% Similarity=0.107 Sum_probs=151.4
Q ss_pred CCcEEEecChHHHHHHHHHhhcC--------C------CCeEEEcCCCCcChHHhHhhhcCcE-EE--EEec--------
Q 046900 120 LNRIVVTAGATAANELLTFILAD--------P------GDALLVPTPYYPGFDRDLRWRTGIK-IV--PIHC-------- 174 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~--------~------gd~Vl~~~p~y~~~~~~~~~~~G~~-v~--~v~~-------- 174 (442)
.+.+++++++++|++.+++.... . +.+|+...-+|.+....+....|.. .. ..|.
T Consensus 103 ~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~ 182 (431)
T TIGR03251 103 LPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDN 182 (431)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCC
Confidence 36899999999999998876521 1 3678888888877543322112211 00 0010
Q ss_pred CC-CCCC-----c-------CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEec
Q 046900 175 DS-SNNF-----Q-------ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 175 ~~-~~~~-----~-------~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
.. ..++ . -+++.+++.+.+ ...++.++++..-....|.+ .+.+-+++|.++|++||+++|+||
T Consensus 183 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 259 (431)
T TIGR03251 183 PKLTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDE 259 (431)
T ss_pred CcccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 00 0000 0 013344444442 23466666666446666765 567779999999999999999999
Q ss_pred cCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHH-------HccccCCCcHH
Q 046900 241 IYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR-------RMSSFTLISSQ 313 (442)
Q Consensus 241 ~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~-------~~~~~~~~s~~ 313 (442)
++..+...|..+ ....+.- ...++ +++|.+ +. .|++.. .+ +.+... .....++.+++
T Consensus 260 V~tG~GrtG~~~-a~~~~gv------~PDi~---~~gK~~--~~--~g~~~~-~~-i~~~~~~~~~~~~~~~~T~~gnpl 323 (431)
T TIGR03251 260 VQTGVGLTGTAW-AYQQLGV------QPDIV---AFGKKT--QV--CGIMAG-RR-VDEVADNVFAVPSRLNSTWGGNLV 323 (431)
T ss_pred chhccCccchHH-HHHhcCC------CCCEE---EecccC--cc--ceEEec-ch-HHHhhhhcccCccccCCCCCCCHH
Confidence 999765544211 1111110 12222 578986 22 266654 32 222111 11222445666
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHc
Q 046900 314 TQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHE 392 (442)
Q Consensus 314 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 392 (442)
+..++.+.|+-..- ...+++.++.-+..++.|.+...+.. +......-|+++.++++.. .....++..|+++
T Consensus 324 ~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~------~~~~~~~~~l~~~ 396 (431)
T TIGR03251 324 DMVRATRILEIIEE-ERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPST------ADRDEVIRQLYRE 396 (431)
T ss_pred HHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCH------HHHHHHHHHHHhC
Confidence 66666665552110 01112222222222333333222232 3222223466777777542 1245678888766
Q ss_pred CcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHH
Q 046900 393 VKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHN 432 (442)
Q Consensus 393 ~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~ 432 (442)
||++.|.. ...+|++.+ .++++++++++++|.+
T Consensus 397 -Gvl~~~~g------~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 397 -GVLLLGCG------ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred -CeEEecCC------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 99998742 245888775 3489999999999875
No 364
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.31 E-value=2.3e-09 Score=98.32 Aligned_cols=324 Identities=16% Similarity=0.231 Sum_probs=207.3
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCC-----CeEEEcCCCCcChH-HhHh
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPG-----DALLVPTPYYPGFD-RDLR 162 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~g-----d~Vl~~~p~y~~~~-~~~~ 162 (442)
..|....++..|.+++.+.++ -+-++.|.-+..|=.+++..+++++ .+..+++..|.... ...+
T Consensus 73 EAYagsrs~~~L~~avkdifG----------fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~ 142 (471)
T COG3033 73 EAYAGSRSYYALADAVKDIFG----------FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQ 142 (471)
T ss_pred hhhcccccHHHHHHHHHHhcC----------ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHH
Confidence 358788889999999999876 2446667767777677777676644 44444555554433 3344
Q ss_pred hhcCcEEEEEecCCCCC--------CcCCHHHHHHHHHHHHhcCCceeEEEEeCCCC-CCCcCCCHHHHHHHHHHHHhcC
Q 046900 163 WRTGIKIVPIHCDSSNN--------FQITPQALEAAYKEAESKDMRVRGVLITNPSN-PLGATIQRSVLEELLDFATRKN 233 (442)
Q Consensus 163 ~~~G~~v~~v~~~~~~~--------~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~N-PtG~~~~~~~l~~l~~~~~~~~ 233 (442)
..|+.++.++.++..+ -.+|++.|++.|.+... .++..|+++..+| ..|+..|.+.++++.++|++|+
T Consensus 143 -~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~--~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ 219 (471)
T COG3033 143 -INGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGA--DNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYD 219 (471)
T ss_pred -hcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCc--ccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcC
Confidence 4888888888776432 23789999999987532 2455677665555 6789999999999999999999
Q ss_pred cEEEEecc-CCcCCC------CCCCcccHHHHHhhh-cCCCCCcEEEEecCcccCCCCCceeEEEeecCHH---HHHHHH
Q 046900 234 IHLVSDEI-YSGSAF------SSSEFVSIAEILEAR-QYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDK---VVTTAR 302 (442)
Q Consensus 234 ~~vi~De~-y~~~~~------~~~~~~s~~~~~~~~-~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~---~~~~~~ 302 (442)
+.++.|-+ |.+..| .+-...|+.++..++ ++ .+ - ..-|.-|. |+..+ .|+++..++. +...++
T Consensus 220 ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sY--aD-~-~~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~ 293 (471)
T COG3033 220 IPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSY--AD-G-CTMSAKKD-GLVNM-GGFLCFKDDSFFDVYEECR 293 (471)
T ss_pred CcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhh--hh-h-heeecccc-ceecc-ccEEEecCccHHHHHHHHH
Confidence 99999988 333222 122456777776652 11 11 1 23455564 23322 2677775553 333343
Q ss_pred H-------ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCccc
Q 046900 303 R-------MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLE 375 (442)
Q Consensus 303 ~-------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~ 375 (442)
. +.++++++.-...+++.-|.+.- -..|+.+...++ ++|.+.|.+.|+++..|.||--++++..+.+.
T Consensus 294 ~~~V~~eG~~tYGgl~GrdmealAvGL~e~~-~~~yl~~Rv~Qv----~YL~~~l~~~GVpi~~paGGHavfvda~~~lp 368 (471)
T COG3033 294 TLVVVQEGFPTYGGLAGRDMEALAVGLREGV-NFDYLAHRVAQV----QYLADGLEEAGVPIVQPAGGHAVFVDAGKFLP 368 (471)
T ss_pred hheEeeccccccCcccchhHHHHHHHHHHhc-CcHHHHHHHHHH----HHHHHHHHhcCCeeEecCCCceEEeehhhhcC
Confidence 2 22344455444444444444321 134555554443 68889999999999999999889988765443
Q ss_pred ccCh--hhHHHHHHHHHHcCcEEEeCCCCCCCC-C----------CCEEEEEee--cCCHHHHHHHHHHHHHHHHH
Q 046900 376 EQTR--EGELALWDSMLHEVKLNISPGSSCHCS-E----------PGWFRVCFA--NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 376 ~~~~--~~~~~l~~~l~~~~gi~v~pg~~f~~~-~----------~~~iRls~~--~~~~e~i~~~l~~l~~~l~~ 436 (442)
.-.. ..++.|+.+|..+.||-..--..|... . -..+|+++. .-+.+.++-.++.++++.+.
T Consensus 369 hip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 369 HIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred CCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 2111 137888899999999987643333221 1 135999986 23678888888888877654
No 365
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.30 E-value=3.9e-09 Score=97.99 Aligned_cols=345 Identities=13% Similarity=0.123 Sum_probs=194.4
Q ss_pred CCCCCCCceeeeecccc----cccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCc
Q 046900 42 EESTNPSGVIQMGLAEN----QVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK 117 (442)
Q Consensus 42 ~~~~~~~~~i~l~~~~n----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~ 117 (442)
..+.+.+.++|+-.+.- -.+++.+...+.++.... + .....|..+ -..++-+++++.+-
T Consensus 44 lyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l-~-------H~t~~~~~~-pi~~~Ae~L~s~~P-------- 106 (442)
T KOG1404|consen 44 LYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKL-Y-------HTTSGYLNP-PIHDLAEALVSKLP-------- 106 (442)
T ss_pred EEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhh-E-------EeeccccCC-cHHHHHHHHHHhCC--------
Confidence 34455566677654321 124455555554443211 1 122345433 23566666666532
Q ss_pred cCCCcEEEecChHHHHHHHHHhh---cCCCCeEEEcCCCCcCh-HHhHhhhcCcEEEEEecCCC--------------CC
Q 046900 118 FDLNRIVVTAGATAANELLTFIL---ADPGDALLVPTPYYPGF-DRDLRWRTGIKIVPIHCDSS--------------NN 179 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l---~~~gd~Vl~~~p~y~~~-~~~~~~~~G~~v~~v~~~~~--------------~~ 179 (442)
-+-..++++|+++||+++++... .+.-| ++--.-+|.+. ...+.+ .|......+.+.. +-
T Consensus 107 ~~l~~vfF~nsGsEANelal~mar~Yt~~~d-iIa~r~~YHG~t~~t~gl-t~~~~~k~~~~~~~~~~~~~~~Pdp~r~~ 184 (442)
T KOG1404|consen 107 GDLKVVFFVNSGSEANELALKMARLYTGNLD-IIARRNSYHGNTLYTLGL-TGLSPWKQNFPGVASGVHHTMNPDPYRGI 184 (442)
T ss_pred CCceEEEEecCCchHHHHHHHHHHHhcCCce-EEEeeccccCCchhhccc-ccCCcccccCCCCCCcccccCCCCccccc
Confidence 23446999999999999987654 33334 44444455443 333321 3333322221111 11
Q ss_pred CcCC-----H----HHHHHHHHHHHhcCCceeEEEEeCC-CCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 180 FQIT-----P----QALEAAYKEAESKDMRVRGVLITNP-SNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 180 ~~~d-----~----~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
|.-+ - +++++.+.. .+..+-+-++.-| +.-.|.+ ++.--+++..++|+++|.++|.||+...|...
T Consensus 185 ~~~~~~~e~~d~~a~~l~d~i~~---~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRt 261 (442)
T KOG1404|consen 185 FGGSNEEEASDRYAKELEDLILY---DGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRT 261 (442)
T ss_pred CCCCchhhhHHHHHHHHHHHHHh---cCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccc
Confidence 1111 2 334444432 1223334455544 5555654 45666999999999999999999999987766
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc-cc--CCCcHHHHHHHHHHhcCc
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS-SF--TLISSQTQYLLASMLSNK 325 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~-~~--~~~s~~~q~~~~~~l~~~ 325 (442)
| .+.. +.. .+.+--+-|++|.+| .|+.+|.++. .+++.+.+.+.. .+ +..++++.++..+.|+-.
T Consensus 262 G-~~wg---fe~------h~v~PDIvTmAKgiG-nG~Pl~AVvt-t~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vi 329 (442)
T KOG1404|consen 262 G-HMWG---FES------HGVVPDIVTMAKGIG-NGFPLGAVVT-TPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVI 329 (442)
T ss_pred c-cccc---ccc------cCCCccHHHHHhhcc-CCCcceeeec-CHHHHHHHHhccccccccCCCchhHHHHHHHHHHH
Confidence 6 3333 322 233344679999999 9999999998 678888887654 22 455777777777776642
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeee--cCCceEEEEEecCCcc-cccC--hhhHHHHHHHHHHcCcEEEe
Q 046900 326 KFTENYIKTNRERLQKRYQMIIEGLRSA--GIECL--KGNAGLFCWMNLSPLL-EEQT--REGELALWDSMLHEVKLNIS 398 (442)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~--~~~~g~~~~~~~~~~~-~~~~--~~~~~~l~~~l~~~~gi~v~ 398 (442)
+ ++ ++.+.-++.-.+|.+.|.+. +.+.+ .-..|+++-+++-... +... ......+.+++.+. |++|-
T Consensus 330 k--ee---~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~-Gvlvg 403 (442)
T KOG1404|consen 330 K--EE---NLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKEL-GVLVG 403 (442)
T ss_pred H--HH---hHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHh-Ceeee
Confidence 2 22 23333344445555555443 22322 2456778777764322 1111 11234556666555 99997
Q ss_pred CCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHH
Q 046900 399 PGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRI 430 (442)
Q Consensus 399 pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l 430 (442)
-|..++ ..+||+.. .+++++++.+++..
T Consensus 404 ~g~i~G----~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 404 KGGIHG----NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred cccccc----eEEEecCCeeccHHHHHHHHHHH
Confidence 776654 38999876 55899996666644
No 366
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.30 E-value=4.7e-09 Score=103.65 Aligned_cols=170 Identities=17% Similarity=0.173 Sum_probs=124.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS 176 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~ 176 (442)
..+..+-.|+.++ ....-+++||++.++..++.+++.+||.|+++.++|-+....+-+ .|+..+++....
T Consensus 72 i~eAqe~aA~~fg---------Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glil-aGa~Pvyl~p~~ 141 (557)
T COG1982 72 IKEAQELAARVFG---------ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLIL-AGATPVYLEPSR 141 (557)
T ss_pred HHHHHHHHHHHhC---------CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHH-cCCceEEecCCC
Confidence 3555566666654 234689999999999999999999999999999999998888775 899888876543
Q ss_pred CCCC----cCCHHHHHHHHHHHHhcCCce-eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 177 SNNF----QITPQALEAAYKEAESKDMRV-RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 177 ~~~~----~~d~~~l~~~l~~~~~~~~~~-~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
+..| +++.+.+++++.+.. .. |+++++||+. .|.++. +++|++++..+++++.+|+++....-....
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~~----~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~ 213 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAHP----DAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPM 213 (557)
T ss_pred CccccccCCCCHHHHHHHHHhCh----hhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCccccccccc
Confidence 3222 468999999887643 33 7889998876 699998 677778888999999999998752211111
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeec
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSY 293 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~ 293 (442)
... ... + .+.++++.|.+|.++ +.-..++|...
T Consensus 214 l~~-~~~--~-----~~~~~~tqS~HK~l~-alSQaS~iHv~ 246 (557)
T COG1982 214 LPE-SAL--N-----GGADFVTQSTHKLLA-ALSQASMIHVK 246 (557)
T ss_pred Ccc-hhh--h-----cCceEEEechhhhhh-hhhhhHHHhhC
Confidence 111 111 1 366788999999985 44455566664
No 367
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.28 E-value=5.6e-09 Score=110.01 Aligned_cols=230 Identities=13% Similarity=0.076 Sum_probs=133.0
Q ss_pred HHHHHHHHHHH--hcCCceeEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHh
Q 046900 185 QALEAAYKEAE--SKDMRVRGVLITNP-SNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILE 260 (442)
Q Consensus 185 ~~l~~~l~~~~--~~~~~~~~v~l~~P-~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~ 260 (442)
+.+++.|.+.. ..+.++.++|+... +.-.|.++ +.+-+++|.++|++||+++|.||++..|...|..+. ...+.-
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa-~e~~gv 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESA-WELLGC 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhh-HHhcCC
Confidence 44555554311 11235555555532 57678876 566699999999999999999999998766664321 111111
Q ss_pred hhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--------ccccCCCcHHHHHHHHHHhc---CchhH
Q 046900 261 ARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR--------MSSFTLISSQTQYLLASMLS---NKKFT 328 (442)
Q Consensus 261 ~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~--------~~~~~~~s~~~q~~~~~~l~---~~~~~ 328 (442)
.+. +-+++|.++ .| +.+|.+++ .+.+.+.+.. ....++.++++.+++.+.|+ +.+..
T Consensus 646 ------~PD---Ii~~gKgLt-gG~~Plaa~l~-~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~ 714 (817)
T PLN02974 646 ------KPD---IACYAKLLT-GGLVPLAATLA-TEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTN 714 (817)
T ss_pred ------CCC---EEeeccccc-CCCCccEEEEE-cHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHH
Confidence 112 346899998 89 69999999 5677766631 12234566777666655554 33221
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhCCCeeecCCceEEEEEecCCcccccC--hhhHHHHHHHHHHcCcEEEeCCCCCCC
Q 046900 329 ENYIKTNRERLQKR-YQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQT--REGELALWDSMLHEVKLNISPGSSCHC 405 (442)
Q Consensus 329 ~~~~~~~~~~~~~~-~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~gi~v~pg~~f~~ 405 (442)
. .+.+..+.+.+. ++.+.+.|.++..-...-.-|+++.+++........ ...+..+.+.++.+.||+++|.
T Consensus 715 ~-~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~----- 788 (817)
T PLN02974 715 P-NLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL----- 788 (817)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec-----
Confidence 1 222222222211 223333444432211223445677777753211111 1124567777772449999983
Q ss_pred CCCCEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 406 SEPGWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 406 ~~~~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
.+.+|+... .++++++++++++|.+.+
T Consensus 789 --Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 789 --GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 146887554 448999999999998765
No 368
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.28 E-value=2.1e-09 Score=97.47 Aligned_cols=293 Identities=16% Similarity=0.215 Sum_probs=179.5
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC--------C-CC-eEEEcCCCCcCh-HHhHhh---
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD--------P-GD-ALLVPTPYYPGF-DRDLRW--- 163 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~--------~-gd-~Vl~~~p~y~~~-~~~~~~--- 163 (442)
..+--+.++|+.+.++ -+.|+.++-+.|+.+.++....+ | .. .|+...-+|.+- ..++..
T Consensus 100 nd~~~~f~~~vt~lf~------~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d 173 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFG------YDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTD 173 (427)
T ss_pred hhhHHHHHHHHHHhcC------cceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCC
Confidence 3444466777776654 56788888888888888765531 2 22 344344444331 111110
Q ss_pred -----hcCc----EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHH-HHHHHHHHHhcC
Q 046900 164 -----RTGI----KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSV-LEELLDFATRKN 233 (442)
Q Consensus 164 -----~~G~----~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~-l~~l~~~~~~~~ 233 (442)
..|- .+..+| | -|.++|+.+++. +++.++++..-+...|++.|.+. ++++.++|.+||
T Consensus 174 ~ds~~~fgp~~P~~~~~v~------Y-~d~eale~~l~~-----~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkyn 241 (427)
T KOG1402|consen 174 PDSWDGFGPFLPGVVDKVP------Y-GDAEALEVALKS-----PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYN 241 (427)
T ss_pred cchhhccCCCCCCcceeec------c-CCHHHHHHHhcC-----CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhc
Confidence 0110 011121 1 168999999874 46665555544889998887665 999999999999
Q ss_pred cEEEEeccCCcCCCCCCCcc-cHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--ccccCC
Q 046900 234 IHLVSDEIYSGSAFSSSEFV-SIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR--MSSFTL 309 (442)
Q Consensus 234 ~~vi~De~y~~~~~~~~~~~-s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~--~~~~~~ 309 (442)
+++|.||+...+..+|+-.. .....- ++ +++ |.|+++ .| +.++.+++ ++++.-.++. ..+.++
T Consensus 242 vl~I~DEvQTGl~RTGk~la~d~env~-------PD-ivi---lgKalS-GG~~Pvsavl~-~~~im~~~~pgeHgsTyg 308 (427)
T KOG1402|consen 242 VLLIADEVQTGLARTGKLLACDYENVR-------PD-IVI---LGKALS-GGVYPVSAVLA-DDDIMLNIKPGEHGSTYG 308 (427)
T ss_pred EEEEehhhhhcccccCcEEEeehhhcC-------CC-eEE---Eecccc-CCeeeeEEEEe-cHHHHhccCCCccccccC
Confidence 99999999998877775321 111111 23 332 468886 44 67888888 5555555543 333456
Q ss_pred CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCee-----ecCCceEEEEEecCCcccccChhhHHH
Q 046900 310 ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIEC-----LKGNAGLFCWMNLSPLLEEQTREGELA 384 (442)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~ 384 (442)
.+++..+++.+.|+-.. + +++.++.+..-+.|...|.++.-++ ....-|++..+.+..... ...++++
T Consensus 309 gNpLg~~vaiAalevi~--e---ekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~--~~~~aw~ 381 (427)
T KOG1402|consen 309 GNPLGCAVAIAALEVIV--E---EKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKT--SGQDAWD 381 (427)
T ss_pred CChHHHHHHHHHHHHHH--H---HHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccc--cchhHHH
Confidence 68888887777776321 2 2344444555566777776652111 123456777776653211 1235888
Q ss_pred HHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHH
Q 046900 385 LWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 385 l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~ 435 (442)
+|-.+.+. |++--|-. ..-||+... .+++++++++++.|.+.+.
T Consensus 382 ~cl~lk~~-g~LAkptH------~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 382 VCLALKEN-GLLAKPTH------GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred HHHccccc-ccccCCCC------CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 88888555 99877732 347999876 5699999999999998764
No 369
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.27 E-value=3.9e-08 Score=100.30 Aligned_cols=330 Identities=15% Similarity=0.123 Sum_probs=196.8
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC----------------------------
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD---------------------------- 142 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~---------------------------- 142 (442)
|....+...+.+.+.+++.+..|. +...-.+|+|+|+++...+.+..+
T Consensus 115 ~e~SP~~t~lE~~vi~~la~l~G~----~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~ 190 (608)
T TIGR03811 115 YESSPATSQMEEEVGKEFATLMGY----KNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMP 190 (608)
T ss_pred cccCchHHHHHHHHHHHHHHHhCC----CCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccc
Confidence 434456789999999999999873 344566899999888764433211
Q ss_pred ------------------------CC------CeEEEcCCCCcChHHhHhhhcCc---EEEEEecCCCCCCcCCHHHHHH
Q 046900 143 ------------------------PG------DALLVPTPYYPGFDRDLRWRTGI---KIVPIHCDSSNNFQITPQALEA 189 (442)
Q Consensus 143 ------------------------~g------d~Vl~~~p~y~~~~~~~~~~~G~---~v~~v~~~~~~~~~~d~~~l~~ 189 (442)
+| -+|+++.-.|..+..++.. .|+ +++.||+++ ++.+|++.|++
T Consensus 191 ~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~i-lGlG~~~vv~VpvD~--~~rmd~~~L~~ 267 (608)
T TIGR03811 191 TKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADI-IGIGLDQVIPVPVDS--NYRMDINELEK 267 (608)
T ss_pred cccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHH-cCCCcccEEEeecCC--CCcCCHHHHHH
Confidence 00 0578888889999999885 888 589999875 56899999999
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCc--EEEEeccCCcCC---CCCC--Cccc--------
Q 046900 190 AYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNI--HLVSDEIYSGSA---FSSS--EFVS-------- 254 (442)
Q Consensus 190 ~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~--~vi~De~y~~~~---~~~~--~~~s-------- 254 (442)
.|++...++..+-+|+-+-.+..+|.+=+.+++.+|++.++++|+ ++.+|.+|+.+. +... .+.+
T Consensus 268 ~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~ 347 (608)
T TIGR03811 268 IIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVH 347 (608)
T ss_pred HHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhccc
Confidence 998776666556567777788899999887666666666678887 699999999853 1110 0011
Q ss_pred ----------------HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc-----------
Q 046900 255 ----------------IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF----------- 307 (442)
Q Consensus 255 ----------------~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~----------- 307 (442)
....... ...--=+.-.++|.+. ....+|.++..+..+.+.+.....+
T Consensus 348 ~~~~~f~~~~~~l~~~~~~~l~g----le~ADSItvDpHK~g~-~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~ 422 (608)
T TIGR03811 348 AEYGVFTEKKEYISREVYNAYKA----ISEAESVTIDPHKMGY-IPYSAGGIVIQDIRMRDVISYFATYVFEKGADIPAL 422 (608)
T ss_pred ccccccccccccccHhHHHHHhc----CcCceEEEeCcccccc-cCCCeEEEEEeCHHHHHHHhcCcchhccccccCccc
Confidence 1111111 0111122458999875 6688999888777665544321111
Q ss_pred -----CCCcHH-----HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCee---ecCCceEEEE
Q 046900 308 -----TLISSQ-----TQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-------GIEC---LKGNAGLFCW 367 (442)
Q Consensus 308 -----~~~s~~-----~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~---~~~~~g~~~~ 367 (442)
...+.+ ..+++...+.- ..+-+.++.+..-+..+++.+.|.+. .+++ .+|+-++.++
T Consensus 423 ~g~~~legSR~ga~AlklW~~lr~l~~---G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~F 499 (608)
T TIGR03811 423 LGAYILEGSKAGATAASVWAAHKVLPL---NVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDY 499 (608)
T ss_pred ccccceecCCccHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEE
Confidence 011212 22222222210 12234566666677778888888763 2443 4566665554
Q ss_pred EecCCcccccChhhHHHHHHHHHHcCc----------EEEeCCCCCCC----------------CCC--------CEEEE
Q 046900 368 MNLSPLLEEQTREGELALWDSMLHEVK----------LNISPGSSCHC----------------SEP--------GWFRV 413 (442)
Q Consensus 368 ~~~~~~~~~~~~~~~~~l~~~l~~~~g----------i~v~pg~~f~~----------------~~~--------~~iRl 413 (442)
.-.+.... ..+...++-+++.++.. +.+.. ..|.. ... ..+|-
T Consensus 500 r~~~~g~~--~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~-t~~~~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 576 (608)
T TIGR03811 500 VFNEKGND--DLVKMNKLNHAFYDYASYVKGSIYNNEFITSH-TDFAIPDYGDSPFAFVNSLGFSDEEWQRAGKVTILRA 576 (608)
T ss_pred EEecCCCc--cHHHHHHHHHHHHHhhccccCCCCCcceEeee-cccccchhhhhHHHHHHHcCCChhhhccCCceEEEEE
Confidence 43333211 11223444444444322 11111 11210 101 24777
Q ss_pred EeecC---CHHHHHHHHHHHHHHHHHHH
Q 046900 414 CFANM---SEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 414 s~~~~---~~e~i~~~l~~l~~~l~~~~ 438 (442)
++-++ +.+.+++.+.+|++++.+.-
T Consensus 577 ~~m~p~~~~~~~~~~~~~~~~~~~~~~~ 604 (608)
T TIGR03811 577 SVMTPYMNDKENFDEYAPKIKAAMQEKL 604 (608)
T ss_pred EecCcccCChhhHHHHHHHHHHHHHHHH
Confidence 76432 55778899999998877643
No 370
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.19 E-value=9.3e-09 Score=95.36 Aligned_cols=190 Identities=21% Similarity=0.252 Sum_probs=113.8
Q ss_pred CcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec---ChHHHHHHHHHhhcCCCCeEEEc-CCCCcChHHhH
Q 046900 86 RENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA---GATAANELLTFILADPGDALLVP-TPYYPGFDRDL 161 (442)
Q Consensus 86 ~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~---G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~~~~~ 161 (442)
....+|+.. ..=|+.+-+-+.+.++ .++-++=. ++|+||..++..+++|||+.+.. -.-|......+
T Consensus 44 ~~tTGYGY~---D~GRd~le~iyA~vfg------aE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VI 114 (403)
T PF06838_consen 44 AGTTGYGYD---DIGRDKLERIYADVFG------AEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVI 114 (403)
T ss_dssp S---TT-TT----HHHHHHHHHHHHHCT-------SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHH
T ss_pred CCCCcCCCC---CccHHHHHHHHHHHhC------chhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHh
Confidence 344555432 2334455554544433 55555533 68999999999999999999853 33455444443
Q ss_pred ----------hhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCCcCCCHHHHHHHHHHHH
Q 046900 162 ----------RWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT-NPSNPLGATIQRSVLEELLDFAT 230 (442)
Q Consensus 162 ----------~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~-~P~NPtG~~~~~~~l~~l~~~~~ 230 (442)
+ ..|++...+++.+++ .+|.+.++++++. ++|++++. +...-+=..++.+++++++++++
T Consensus 115 G~~g~~~GSL~-e~Gi~Y~~v~L~~dg--~~D~~~i~~~~~~------~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk 185 (403)
T PF06838_consen 115 GIRGNGPGSLK-EFGIKYREVPLTEDG--TIDWEAIKKALKP------NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVK 185 (403)
T ss_dssp TSSSSSSSSTG-GGT-EEEE--B-TTS--SB-HHHHHHHHHT------TEEEEEEE-S-TTSSS----HHHHHHHHHHHH
T ss_pred CCCCCCCCChH-HhCceeEEEeecCCC--CcCHHHHHHhhcc------CceEEEEecCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4 278999999998765 4899999999985 89998887 44566667799999999999997
Q ss_pred hc--CcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc--eeEEEeecCHHHHHHHHHccc
Q 046900 231 RK--NIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF--RVGTIYSYNDKVVTTARRMSS 306 (442)
Q Consensus 231 ~~--~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~--RiG~i~~~~~~~~~~~~~~~~ 306 (442)
+. ++++++|.+|++|+-...+ + +. +--++.+|+-|..| .|+ --|||++..+.+.....++..
T Consensus 186 ~~~p~~iifVDNCYGEFvE~~EP--~--~v---------GADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~RLTa 251 (403)
T PF06838_consen 186 EINPDVIIFVDNCYGEFVETQEP--T--EV---------GADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYRLTA 251 (403)
T ss_dssp HH-TTSEEEEE-TTTTTTSSS-G--G--GG---------T-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHHHS-
T ss_pred hhCCCeEEEEeCCcceeccccCc--c--cc---------chhheeccceeCCC-CCccCcCCEEechHHHHHHHHhhhcC
Confidence 66 7899999999997743222 1 12 22378999999876 442 238999954444444455554
Q ss_pred c
Q 046900 307 F 307 (442)
Q Consensus 307 ~ 307 (442)
+
T Consensus 252 P 252 (403)
T PF06838_consen 252 P 252 (403)
T ss_dssp T
T ss_pred C
Confidence 4
No 371
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.18 E-value=3.7e-08 Score=94.41 Aligned_cols=328 Identities=13% Similarity=0.101 Sum_probs=185.2
Q ss_pred eeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC-CcEEE-ec
Q 046900 50 VIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRIVV-TA 127 (442)
Q Consensus 50 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i~~-t~ 127 (442)
.++|+.+-..+|.+.+++..++..+.... |.+-. +..+.. .-..++-+.+.+.+++.++ ++. .+|++ ..
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~--g~si~-eisHRs--~~F~~i~~~~~~~Lr~Ll~----~P~~y~Vlfl~G 75 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPET--GLSVL-GMSHRS--SWFSSLLAQAEADLRDLLG----IPDEYGVVFLQG 75 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhccccc--Ccccc-cccccc--HHHHHHHHHHHHHHHHHhC----CCCCCeEEEEec
Confidence 46888887778877777666544332111 11111 122222 2235555666666666655 322 24555 45
Q ss_pred ChHHHHHHHHHhhcCCCCeEE-EcCCCCcC--hHHhHhhhcCcEEEEEecCCCCCC--cCCHHHHHHHHHHHHhcCCcee
Q 046900 128 GATAANELLTFILADPGDALL-VPTPYYPG--FDRDLRWRTGIKIVPIHCDSSNNF--QITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~gd~Vl-~~~p~y~~--~~~~~~~~~G~~v~~v~~~~~~~~--~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
|++.++.++...|+.+||.++ +..-++.+ +...++ .+| ++..+......+| .++++.+.. +.+.+
T Consensus 76 ggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~-~~g-~v~~~~~~~~~~~~~~p~~~~~~~--------~~d~~ 145 (364)
T PRK12462 76 GSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEAS-RVA-AMRVVWDGAASGYRTLPSLAELDW--------DARAP 145 (364)
T ss_pred cHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHH-hcC-CceEecCcCCCCCCcCCCHHHhcc--------CCCCc
Confidence 599999999999999999665 44444433 334444 356 4444432222222 334555421 12456
Q ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC
Q 046900 203 GVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL 282 (442)
Q Consensus 203 ~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 282 (442)
.|.+|.-...||+.++ ++.+.++.++|+|-+-+- .+. +..+..+ -++..+.-|.+|.
T Consensus 146 ~v~~t~NETstGv~~~--------~~~~~~~~llvvD~sS~~---~s~-pid~~~~-----------dvi~agsQKnlgP 202 (364)
T PRK12462 146 FRHYVSNETVEGLQFP--------DAAGLPDSPLIADMSSDF---MSR-PFDVEAY-----------GMVYAHAQKNLGP 202 (364)
T ss_pred EEEEccCCCCceEecC--------cccccCCCeEEEEcCchh---hCC-CCChHHc-----------cEEEeeccccCCC
Confidence 7777766678999886 222236899999999773 232 2344333 1556788999998
Q ss_pred CCceeEEEeecCHHHHHHHHH--------------ccccCCCcHHHHHHHHHHhcCchhH-HH--HHHHHHHHHHHHHHH
Q 046900 283 PGFRVGTIYSYNDKVVTTARR--------------MSSFTLISSQTQYLLASMLSNKKFT-EN--YIKTNRERLQKRYQM 345 (442)
Q Consensus 283 ~G~RiG~i~~~~~~~~~~~~~--------------~~~~~~~s~~~q~~~~~~l~~~~~~-~~--~~~~~~~~~~~~~~~ 345 (442)
|| ++.++.+++.+. .... ...+.+.+...-.++...++ |+ ++ -++.+.++-+++.+.
T Consensus 203 ~G--ltvvivs~~al~-~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~---~i~~e~GGl~~~~~r~~~ka~~ 276 (364)
T PRK12462 203 AG--VTVAIIRRALLE-RVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLR---WIRDEIGGVHAMRDINARKAAM 276 (364)
T ss_pred Cc--eEEEEECHHHHh-hccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHH---HHHHhccCHHHHHHHHHHHHHH
Confidence 87 577777444332 2111 11122333444444444443 22 22 356667777788888
Q ss_pred HHHHHHhCC-Ceeec----CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCC
Q 046900 346 IIEGLRSAG-IECLK----GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMS 419 (442)
Q Consensus 346 l~~~L~~~g-~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~ 419 (442)
+.+.+.+.. +-... ..+-+.+.+++++. +...+|.+.+. +.|+.-.-|..- .|.+|+|+- .++
T Consensus 277 ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~------~l~~~f~~~a~-~~gl~~lkGhr~----vgg~Ras~yna~~ 345 (364)
T PRK12462 277 LYATLDALNEVIDCHAHRAARSTMNVAFRFRQP------RLDTLFKEQST-EAGFCGLSGHRS----IGGIRASLYNAVS 345 (364)
T ss_pred HHHHHHhCCCcccCCCChhhcCcceEEEEcCCH------HHHHHHHHHHH-HCCCccccCCcc----cCceEEEcCCCCC
Confidence 888888763 33221 23445566665542 12456666664 449988776542 355999986 447
Q ss_pred HHHHHHHHHHHHHHHHH
Q 046900 420 EQTLEVALKRIHNFMQK 436 (442)
Q Consensus 420 ~e~i~~~l~~l~~~l~~ 436 (442)
.|.++.+++-++++-++
T Consensus 346 ~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 346 EQAVSRLCAFLKDFAIR 362 (364)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 77777666666665443
No 372
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.15 E-value=3.4e-08 Score=93.12 Aligned_cols=318 Identities=16% Similarity=0.193 Sum_probs=185.5
Q ss_pred cccccCC---CcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHH---HHHHHHHhhcCCC----CeEEEcCCCCcC
Q 046900 87 ENALFQD---YHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATA---ANELLTFILADPG----DALLVPTPYYPG 156 (442)
Q Consensus 87 ~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~---ai~~~~~~l~~~g----d~Vl~~~p~y~~ 156 (442)
.++-|.| .+|+.++...+.+||.+..| .+.-.+-.-+|++. ++.++-...-..| +.||+|+-.|..
T Consensus 94 ~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG----~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGT 169 (496)
T COG1003 94 NIHPFQPEEQVQGYLELIYELQEWLKEITG----MDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGT 169 (496)
T ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHhcC----CceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCC
Confidence 3444544 37999999999999998765 33333444445443 3333322233333 689999999988
Q ss_pred hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE
Q 046900 157 FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 157 ~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v 236 (442)
-...+.. .|++|+.|+.+++|. +|+++|++.+.+ ++.++.++|||. .|.- .+.+++|+++..++|..|
T Consensus 170 NPASAam-~G~~VV~V~~~~~G~--VDlddLk~k~~~------~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~v 237 (496)
T COG1003 170 NPASAAM-AGFKVVVVKCDENGN--VDLDDLRAKAED------NLAALMITNPST-LGVF--EEDIREICEIVHEAGGQV 237 (496)
T ss_pred ChhhHhh-cCceEEEEecCCCCC--ccHHHHHHHhcc------ceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEE
Confidence 8888885 999999999998774 999999999875 888999999875 3443 567999999999999999
Q ss_pred EEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC----CceeEEEeecCHHHHHHHH----------
Q 046900 237 VSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP----GFRVGTIYSYNDKVVTTAR---------- 302 (442)
Q Consensus 237 i~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~----G~RiG~i~~~~~~~~~~~~---------- 302 (442)
..|.+-..-..+-..+ ..+ +--++=-.++|+|+.| |-..|=|.. ...+..++-
T Consensus 238 Y~DGANlNA~vG~~rP---Gd~---------G~DV~HlNLHKTF~iPHGGGGPG~GPvgV-k~~L~pfLP~p~~~~~~~~ 304 (496)
T COG1003 238 YYDGANLNAIVGLARP---GDM---------GFDVVHLNLHKTFCIPHGGGGPGAGPVGV-KAHLAPFLPGPVVYHDVGE 304 (496)
T ss_pred EecCcchhhhhccccc---ccc---------ccceEEeecccccccCCCCCCCCCCceeh-HhhccccCCCCcccCCCcc
Confidence 9999976433322111 111 1112233677877433 223343333 122221110
Q ss_pred ------------HccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC-ceEEEEE
Q 046900 303 ------------RMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGN-AGLFCWM 368 (442)
Q Consensus 303 ------------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~g~~~~~ 368 (442)
+...+++ |......+-.++.. .-.+-+++..+.---+..++...|+.. .+.+.+.. -.-=+.+
T Consensus 305 y~~~~~~~~s~g~~~a~~G-s~~il~~a~~YI~~--mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~il 381 (496)
T COG1003 305 YRLDYDGKKSIGVSAAPYG-SASILPIAWAYIRM--MGADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAHECIL 381 (496)
T ss_pred ccccCCCCccceeeccccC-cchHHHHHHHHHHH--HhHHHHHHHHHHHHHhHHHHHHHhhhcCccccCCCCcceeEEEe
Confidence 0111111 11111111122221 112224444444455677888888763 22222211 0111223
Q ss_pred ecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 369 NLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 369 ~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+........+. .+.+++++|++. |+.- |--.|..--.+.+-|=.. +.+++++++++++|.++.++.++
T Consensus 382 d~r~l~~~~Gv-~~~DvAKrLlD~-GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 382 DARPLKKETGV-RALDVAKRLLDY-GFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred echHhHhhcCC-cHHHHHHHHHhc-CCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 44322221221 478899999887 9874 444554222455666554 23789999999999998776543
No 373
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.13 E-value=1.1e-08 Score=95.81 Aligned_cols=291 Identities=15% Similarity=0.124 Sum_probs=166.0
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCC---C-----CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCC------CCCcCCH
Q 046900 119 DLNRIVVTAGATAANELLTFILADP---G-----DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS------NNFQITP 184 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~---g-----d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~------~~~~~d~ 184 (442)
+++.|++++++|+|+..++..-.+. + ..|+...-+|.+-...+....+......|.++. ..| -|+
T Consensus 115 ~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~y-nd~ 193 (433)
T KOG1401|consen 115 SAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEY-NDS 193 (433)
T ss_pred CccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeeccc-CCH
Confidence 6889999999999999987654321 1 137777777766433222113333333332210 011 268
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhc
Q 046900 185 QALEAAYKEAESKDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQ 263 (442)
Q Consensus 185 ~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~ 263 (442)
..+++.++.+ ...+.+||+..-..-.|.. .+++-+..|.+.|+++++++|.||+...|...+.. ...++..-
T Consensus 194 t~l~k~~~~h---~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~--~a~e~~~~-- 266 (433)
T KOG1401|consen 194 TALEKLFESH---KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYG--WAQEYFGV-- 266 (433)
T ss_pred HHHHHHHHhC---CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchH--HHHHHhCc--
Confidence 8999988863 2235666666446667765 46667999999999999999999999876554432 22222221
Q ss_pred CCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc-----ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 046900 264 YKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS-----SFTLISSQTQYLLASMLSNKKFTENYIKTNRER 338 (442)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~-----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 338 (442)
.+| +.++.|.++ .|+.+|..++ ++.+...+..-. ..++.++++-.++...++...- .++++.....
T Consensus 267 --~PD----I~t~aK~L~-gGlPigA~~v-~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~-~e~~k~vs~~ 337 (433)
T KOG1401|consen 267 --TPD----ITTVAKPLG-GGLPIGATGV-RDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKD-PETLKNVSKI 337 (433)
T ss_pred --CCc----ceeehhhcc-CCceeEEEee-hHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcC-HHHHHHHHHH
Confidence 112 457899998 9999999998 677777765322 2244566666665555442211 2234445555
Q ss_pred HHHHHHHHHHHHHhCCCeeec-CCceEEEEEecCCcccc--cChhhHHH----HHHHHHHcCcEEEeCCCCCCCCCCCEE
Q 046900 339 LQKRYQMIIEGLRSAGIECLK-GNAGLFCWMNLSPLLEE--QTREGELA----LWDSMLHEVKLNISPGSSCHCSEPGWF 411 (442)
Q Consensus 339 ~~~~~~~l~~~L~~~g~~~~~-~~~g~~~~~~~~~~~~~--~~~~~~~~----l~~~l~~~~gi~v~pg~~f~~~~~~~i 411 (442)
=+..|+.+.+.+.+..-.... -..++++.+.+...... +....... +...++++ |+.++| -+
T Consensus 338 ~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~-gv~i~P---------~~- 406 (433)
T KOG1401|consen 338 GKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEE-GVRIAP---------IY- 406 (433)
T ss_pred HHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccc-eEEEec---------cc-
Confidence 555566666777654222221 34455655544332110 00000111 11122222 444444 00
Q ss_pred EEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 412 RVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 412 Rls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
-+++.. ++|.++++++.+.+.+.+..
T Consensus 407 ~l~~~~-~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 407 LLTVEH-TPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred cccccC-cHHHHHHHHHHHHHHHHHhc
Confidence 123333 57889999999998887653
No 374
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.11 E-value=3.1e-09 Score=102.36 Aligned_cols=250 Identities=13% Similarity=0.079 Sum_probs=141.0
Q ss_pred CCCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+||+..+. ..+ ..+.+.+.+.+.... ...........+...++++.+.+..+ -.
T Consensus 12 d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~------------~~~~~~~~~~~~~~~~la~~L~~~~p----~~ 75 (339)
T PF00202_consen 12 DVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANK------------LNYVSFSGFTHPEAAELAEKLAELFP----GG 75 (339)
T ss_dssp ETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHH------------CSSCSTTTSEEHHHHHHHHHHHHHSS----TT
T ss_pred ECCCCEEEECCCCccceecCCCccccchhHHHHhhh------------cccccccceeccchhhhhhhhhhccc----cc
Confidence 34456788987543 333 235555555443211 01111122335667778888777542 13
Q ss_pred CCcEEEecChHHHHHHHHHhhc--------CCCCeEEEcCCCCcChHHhHhhh------------cCcEEEEEecCCCCC
Q 046900 120 LNRIVVTAGATAANELLTFILA--------DPGDALLVPTPYYPGFDRDLRWR------------TGIKIVPIHCDSSNN 179 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~------------~G~~v~~v~~~~~~~ 179 (442)
.+.+++++++++|++.+++... .....|+...-+|.+........ ....+..+|.+....
T Consensus 76 ~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 155 (339)
T PF00202_consen 76 LDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA 155 (339)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH
T ss_pred cceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch
Confidence 5689999999999999987765 13368888888887643221110 111334555432100
Q ss_pred ---CcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccH
Q 046900 180 ---FQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSI 255 (442)
Q Consensus 180 ---~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~ 255 (442)
..-..+.+++.+.+.. ..++.++++..-....|.. .+.+-+++|.++|++||+++|.||++..+...|..+ ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~--~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~ 232 (339)
T PF00202_consen 156 DEEEQACLNALEELIAALN--ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-AS 232 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHH--GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-GH
T ss_pred hhhHHHHHHHHHHHHHhhc--CCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-ce
Confidence 0000122333333322 2356555555334445654 466679999999999999999999999876666533 22
Q ss_pred HHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhc
Q 046900 256 AEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLS 323 (442)
Q Consensus 256 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~ 323 (442)
....- .+.++ +++|.++ .|+.+|.+++ .+.+.+.+.. ..+.+..++++..++.+.|+
T Consensus 233 ~~~gv------~PDiv---~~gK~l~-gG~p~sav~~-~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~ 291 (339)
T PF00202_consen 233 EHYGV------DPDIV---TFGKGLG-GGLPISAVLG-SEEIMEAFQPGSHGSTFGGNPLSCAAALATLE 291 (339)
T ss_dssp HHHTS------SSSEE---EEEGGGG-TTSSEEEEEE-EHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHH
T ss_pred ecccc------cCccc---ccccchh-hhhhcccccc-cchhhccccccccccccccchHhhhhhhhHHH
Confidence 22221 12232 4579998 8899999999 5666655432 22334556777766666665
No 375
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.00 E-value=1.1e-07 Score=86.53 Aligned_cols=272 Identities=17% Similarity=0.133 Sum_probs=167.4
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCC-CcC----hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILAD--PGDALLVPTPY-YPG----FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAA 190 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~-y~~----~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~ 190 (442)
..+.+++++++++-.++.++.+.++ +|+.|++++-. |+. ....+.. .|.. + +- .-.+.+++++++
T Consensus 91 A~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~-~~~~---~--~~--~~~~~P~~~~~~ 162 (407)
T COG3844 91 ARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADL-LGIG---Y--DL--EGVIAPRALEEA 162 (407)
T ss_pred CCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhh-hccc---c--cc--eeeeChHHHHHh
Confidence 6789999999999888887766644 58888887543 332 2223332 3322 1 11 112457789988
Q ss_pred HHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcE
Q 046900 191 YKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERV 270 (442)
Q Consensus 191 l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~v 270 (442)
+.+ ++.+++++..+.-||+.+. +.+|-.++.+++++++-|-+|+-..+ +..+... +.-
T Consensus 163 ~~d------d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGav----p~~Lh~~---------gaD 220 (407)
T COG3844 163 ITD------DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAV----PVDLHAA---------GAD 220 (407)
T ss_pred hcc------ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCc----ceeeccc---------CCC
Confidence 876 7888888888999999998 77778888899999999999985332 2222111 333
Q ss_pred EEEecCcccCC-CCCceeEEEeecCHHHHHHHHHcc----------------------cc--CCCcHHHHHHHHHHhcCc
Q 046900 271 HIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMS----------------------SF--TLISSQTQYLLASMLSNK 325 (442)
Q Consensus 271 i~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~----------------------~~--~~~s~~~q~~~~~~l~~~ 325 (442)
+-+++--|.++ -||-..|..+. +........... .+ +..+..+..++...|+-.
T Consensus 221 faigcsyKYLNgGPGapa~l~v~-~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDif 299 (407)
T COG3844 221 FAIGCSYKYLNGGPGAPAGLFVA-PRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIF 299 (407)
T ss_pred eeeeeeceeccCCCCCceeEEec-cccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhh
Confidence 56788888763 35544343333 221111111100 00 111222333333333321
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCC----ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEE
Q 046900 326 KFTENYIKTNRERLQKRYQMIIEGLRSA----GIECLKGN----AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNI 397 (442)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v 397 (442)
. +-.+.+.|++--...+++.+.++.. ++++..|. .|-.+.+..|. ..++.+.|.++ ||..
T Consensus 300 a--~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~---------~~~V~qaLi~r-GVig 367 (407)
T COG3844 300 A--DVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH---------GYQVMQALIDR-GVIG 367 (407)
T ss_pred h--hcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc---------HHHHHHHHHHc-Cccc
Confidence 1 1125666666666778888877653 55655442 33355555554 67888888777 9873
Q ss_pred eCCCCCCCCCCCEEEEEeecC--CHHHHHHHHHHHHHHHHHHH
Q 046900 398 SPGSSCHCSEPGWFRVCFANM--SEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 398 ~pg~~f~~~~~~~iRls~~~~--~~e~i~~~l~~l~~~l~~~~ 438 (442)
. | ..++-+|+.++.+ +-+++=.+++.|.+++.+..
T Consensus 368 ---D-~--R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 368 ---D-F--REPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred ---c-c--cCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 2 2 3568899998732 78889999999999998754
No 376
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.00 E-value=1.3e-07 Score=84.96 Aligned_cols=299 Identities=11% Similarity=0.178 Sum_probs=173.7
Q ss_pred CcEEEecChHHHHHHHHHhh---cCCCCeEEEcCCCCcChHHh-Hhhh-----cCc-----EEEEE-ecCC--CCCCcC-
Q 046900 121 NRIVVTAGATAANELLTFIL---ADPGDALLVPTPYYPGFDRD-LRWR-----TGI-----KIVPI-HCDS--SNNFQI- 182 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l---~~~gd~Vl~~~p~y~~~~~~-~~~~-----~G~-----~v~~v-~~~~--~~~~~~- 182 (442)
+-++++|+++++.+++++.. .+..|.|.++ -.|.+.... +..+ .|. +.+.+ |..+ .+.|..
T Consensus 103 svc~F~NSGSEANDLALRLAR~ftkhqDvItld-HAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~ 181 (452)
T KOG1403|consen 103 SVCFFVNSGSEANDLALRLARNFTKHQDVITLD-HAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDK 181 (452)
T ss_pred eEEEEecCCchhhHHHHHHHHhhcccCceEEEe-chhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccc
Confidence 46889999999999987654 5566755554 444433221 1110 111 22222 1111 011111
Q ss_pred ----------CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHH-HHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 183 ----------TPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSV-LEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 183 ----------d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~-l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
=.+.+++.+.+...++.++.+.+-.+-+.=.|+++|+.. .+++++..+.+|-+.|.||+.-.|..-|..
T Consensus 182 ~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~h 261 (452)
T KOG1403|consen 182 MYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSH 261 (452)
T ss_pred cCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchh
Confidence 135667777665555555544444444556788877665 889999999999999999999886655655
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-----ccccCCCcHHHHHHHHHHhcCch
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-----MSSFTLISSQTQYLLASMLSNKK 326 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~ 326 (442)
++++.-. +-+--+-++.|.+| .|..++.+++ .+++.+++.. +.+ ++.++.+-++..+.++..+
T Consensus 262 yWafq~y---------~fiPDIVtmgKpmG-NGhPVa~Vat-tkeIA~Af~atgv~YFNT-yGGnPVsCAv~laVm~v~e 329 (452)
T KOG1403|consen 262 YWAFQTY---------NFIPDIVTMGKPMG-NGHPVAAVAT-TKEIAQAFHATGVEYFNT-YGGNPVSCAVGLAVMRVCE 329 (452)
T ss_pred hhhhhhh---------ccccchheecccCC-CCCeeeEEec-cHHHHHHhccccceehhc-cCCCchhHHHHHHHHHHHh
Confidence 5443322 22222457899999 9999999998 6777777754 222 4457777776666665322
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec--CCceEEEEEecCCccc--ccChhhHHHHHHHHHHcCcEEEeCCCC
Q 046900 327 FTENYIKTNRERLQKRYQMIIEGLRSAGIECLK--GNAGLFCWMNLSPLLE--EQTREGELALWDSMLHEVKLNISPGSS 402 (442)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~g~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~gi~v~pg~~ 402 (442)
++.+....++.-+....+...++. ..+++. -..|+|+-+++-..-. ...-..+.-+..+|.+.++|++..-
T Consensus 330 --~E~Lq~ha~~vG~~L~~lL~~~k~-kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaD-- 404 (452)
T KOG1403|consen 330 --DENLQEHAQQVGEKLEVLLRRLKQ-KHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSAD-- 404 (452)
T ss_pred --hhhHHHHHHHHHHHHHHHHHHHhh-hccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecC--
Confidence 222333333333333333333332 233333 3567888888743211 1222345667778888889998741
Q ss_pred CCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 403 CHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 403 f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
++..+-+.|-.. +.+++..++++..|.+++.-...
T Consensus 405 --GPh~NilKiKPPmCFneena~e~v~~ld~iLT~mee 440 (452)
T KOG1403|consen 405 --GPHRNILKIKPPMCFNEENADEFVLGLDEILTVMEE 440 (452)
T ss_pred --CCCCceeecCCCcccChhhHHHHHHHHHHHHHHHHH
Confidence 122334444321 22678888888888887775443
No 377
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.93 E-value=2.1e-07 Score=88.63 Aligned_cols=305 Identities=13% Similarity=0.158 Sum_probs=186.2
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh---cC--CC---CeEEEcCCCCcChHHhHhhhcC
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL---AD--PG---DALLVPTPYYPGFDRDLRWRTG 166 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l---~~--~g---d~Vl~~~p~y~~~~~~~~~~~G 166 (442)
.+...+.+++-+++...++.+ +..-=..|.|+++++.+..... .. .| ..++++.-.+..+...++. .+
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~---~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~y-f~ 191 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP---SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARY-FE 191 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC---ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhh-EE
Confidence 466788888888888776522 2233567888999855544332 11 12 3566666677777777774 89
Q ss_pred cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHh-cCcEEEEeccCCcC
Q 046900 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATR-KNIHLVSDEIYSGS 245 (442)
Q Consensus 167 ~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~-~~~~vi~De~y~~~ 245 (442)
+++..||+++ +.|.+|+..+.+.+.+ ++..++..-|+.|+|.. +..++|.++..+ +++.+.+|.+-+.|
T Consensus 192 v~l~~V~~~~-~~~~~D~~k~~~~i~e------Nti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgF 261 (491)
T KOG1383|consen 192 VELREVPLDE-GDYRVDPGKVVRMIDE------NTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGF 261 (491)
T ss_pred EEEEeeeccc-cceEecHHHHHHHhcc------ceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccc
Confidence 9999999986 6799999999999887 89999999999999987 558888888878 99999999999887
Q ss_pred CCC-CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH---------cccc-CCCc---
Q 046900 246 AFS-SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR---------MSSF-TLIS--- 311 (442)
Q Consensus 246 ~~~-~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~---------~~~~-~~~s--- 311 (442)
+-. +.. ....++ +..+...-.-.+-+| +|+.--..||++-.++.+...--. +.++ ...|
T Consensus 262 i~p~~~~--~~~~fd----Fr~p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g 334 (491)
T KOG1383|consen 262 INPAGYL--NEEEFD----FRVPGVTSISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPG 334 (491)
T ss_pred ccccccc--Cccccc----cCCCCceeEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcc
Confidence 742 110 000111 111122222235566 444444479998765544321100 1111 1112
Q ss_pred --HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC-CceEEEEEecCCcccccChhhHHHHHH
Q 046900 312 --SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKG-NAGLFCWMNLSPLLEEQTREGELALWD 387 (442)
Q Consensus 312 --~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~ 387 (442)
...|++..--+...+ ..+..+.+.+....+.+.+++. ++.+... .-. |+...-.. .+..++.+
T Consensus 335 ~~va~~wa~~~~lG~eG-----Y~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs-~~~~~s~~-------~~i~elsd 401 (491)
T KOG1383|consen 335 SQVAAQWAALMSLGEEG-----YRENTQNIVETARKLREGIENIKGIKIVGKPLVS-FILFGSND-------VNIFELSD 401 (491)
T ss_pred cHHHHHHHHHHHhhHHH-----HHHHHHHHHHHHHHHHHhhhccccceecCCCcEE-EEEccCCc-------cchhhhhH
Confidence 233443333333333 3455666778888888999886 6766553 333 33222221 13566777
Q ss_pred HHHHcCcEEEeCCCCCCCCCCCEEEEEee--cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 388 SMLHEVKLNISPGSSCHCSEPGWFRVCFA--NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 388 ~l~~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.|.+. |..+.. -.|. ..+-+++. ...++--++++.-|+++++++..
T Consensus 402 ~l~~~-GW~lna-lq~P----~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 402 LLRKK-GWILNA-LQFP----AAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred HHHhc-CcCccc-cCCC----CceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 76555 887653 3332 23444443 22455568888888888887654
No 378
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.90 E-value=2.1e-06 Score=91.11 Aligned_cols=285 Identities=13% Similarity=0.148 Sum_probs=168.8
Q ss_pred ccccCCCc-----chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc-C--CCCeEEEcCCCCcChHH
Q 046900 88 NALFQDYH-----GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA-D--PGDALLVPTPYYPGFDR 159 (442)
Q Consensus 88 ~~~Y~~~~-----g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~-~--~gd~Vl~~~p~y~~~~~ 159 (442)
...|.|++ |..+..=.+...+.+..| ++..|.-+..+++.+.++++.+.. . ++++|++++-.||.+..
T Consensus 93 ~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtG----m~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~ 168 (939)
T TIGR00461 93 YTAYTPYQPEISQGRLEALLNFQTVVSDLTG----LPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKS 168 (939)
T ss_pred hhcCCCCChhhhhHHHHHHHHHHHHHHHHHC----CChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHH
Confidence 34566654 433333233333444434 677788888888888887766542 2 34799999999999876
Q ss_pred hHhh---hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE
Q 046900 160 DLRW---RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 160 ~~~~---~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v 236 (442)
.++. ..|++++.++ +++|++.+ ++.++++.+|+. .|.+. ++++|++++++++.++
T Consensus 169 v~~t~a~~~g~~v~~~~----------~~~l~~~~--------~~~~v~~q~Pn~-~G~ie---d~~~i~~~~h~~gal~ 226 (939)
T TIGR00461 169 VLHTRAKPFGIEVIVVD----------CSDIKKAV--------DVFGCLLQYPAT-DGSIL---DYKQLIDALHSHKSLV 226 (939)
T ss_pred HHHHHHHhcCcEEEEEc----------HHHHhhcC--------CEEEEEEECCCC-CeEEe---cHHHHHHHHHHcCCEE
Confidence 6552 3788888764 34444332 456778888875 78875 4889999999999999
Q ss_pred EEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC----CCceeEEEeecCHHHHHHHH-H--------
Q 046900 237 VSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL----PGFRVGTIYSYNDKVVTTAR-R-------- 303 (442)
Q Consensus 237 i~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~----~G~RiG~i~~~~~~~~~~~~-~-------- 303 (442)
+++---..+. -..+..++..+ |+++ .+|.||+ .|--.|++.+. +.+...+- +
T Consensus 227 ~~~ad~~al~----ll~~Pge~GaD---------i~vg-~~q~fg~p~g~GGP~aG~~a~~-~~l~r~lPgrivG~s~D~ 291 (939)
T TIGR00461 227 SVAADLMALT----LLTPPGHYGAD---------IVLG-SSQRFGVPMGYGGPHAAFFAVK-DEYNRKMPGRIVGVSKDA 291 (939)
T ss_pred EEEechHHhC----CcCCHHHcCCc---------EEee-CCCccCCCCCCCCCceeeeeec-HhhHhhCCCCceeEEecC
Confidence 9843322211 12333334332 4444 3444443 25457887773 33332210 0
Q ss_pred -------------------ccccC-CCcHHHHHHHHHH--hcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC
Q 046900 304 -------------------MSSFT-LISSQTQYLLASM--LSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN 361 (442)
Q Consensus 304 -------------------~~~~~-~~s~~~q~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 361 (442)
..... .++.....++.+. +.- +..+-+++..++...+..++.+.|.+.|+++..+
T Consensus 292 ~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~--~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~- 368 (939)
T TIGR00461 292 LGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVY--HGPKGLKNIARRIHSLTSILANGLENDPHELINK- 368 (939)
T ss_pred CCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-
Confidence 00011 1111122221111 111 1134477778888888899999999989887654
Q ss_pred ceEE--EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHH
Q 046900 362 AGLF--CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIH 431 (442)
Q Consensus 362 ~g~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~ 431 (442)
.+| +.++++. . ++.++.+.++++ ||.++.. ..+.+++|+.. -++++++.+++.+.
T Consensus 369 -~fF~~~~v~~~~-~------~~~~i~~~~~~~-gi~l~~~------~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 369 -TWFDTLTVKVGN-G------ISSELLKAAEEF-NINLRAV------DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred -CccceEEEEeCC-C------CHHHHHHHHHHC-CCeeeec------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 334 2334431 0 266788888777 9997752 23579999972 28899999999885
No 379
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.88 E-value=1.1e-06 Score=83.28 Aligned_cols=178 Identities=18% Similarity=0.174 Sum_probs=124.5
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEE-----EcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALL-----VPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl-----~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
..+.++++|..+.++.++..++..++..|+ ++ ++.+.+.+.++. .|++++.+-.... -...+++.+|.+
T Consensus 82 ~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~-gg~~~v~d~~~~-aG~~l~EvG~tn~----t~~~d~~~AIne 155 (395)
T COG1921 82 GAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE-GGAFRVPDIIRL-AGAKLVEVGTTNR----THLKDYELAINE 155 (395)
T ss_pred chhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-CCCCChhHHHHH-cCCEEEEecccCc----CCHHHHHHHhcc
Confidence 368899999999999999999987555443 23 577889999995 9999999875432 467899999987
Q ss_pred HHhcCCceeEEEEeCC-CCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEE
Q 046900 194 AESKDMRVRGVLITNP-SNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHI 272 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P-~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~ 272 (442)
++++++-+.- |.+--..++ +++++++|+++|+++++|.+-+..+-... .+...... +--++
T Consensus 156 ------~ta~llkV~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~~e~---~l~~~la~------GaDLV 217 (395)
T COG1921 156 ------NTALLLKVHSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVDKEP---DLREALAL------GADLV 217 (395)
T ss_pred ------CCeeEEEEeecccccccccc---HHHHHHHHHHcCCCEEEecCCcccccccc---chhHHHhc------CCCEE
Confidence 7777766544 433222344 66788888899999999999887653222 23333332 34477
Q ss_pred EecCcccCCCCCceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhc
Q 046900 273 VYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLS 323 (442)
Q Consensus 273 ~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~ 323 (442)
+.|-.|.|| |.+.|.+++ .++++..+++... .+-+..+...++.+.|+
T Consensus 218 ~~SgdKllg--GPqaGii~G-kKelI~~lq~~~l~Ralrv~K~tla~l~~aLe 267 (395)
T COG1921 218 SFSGDKLLG--GPQAGIIVG-KKELIEKLQSHPLKRALRVDKETLAALEAALE 267 (395)
T ss_pred EEecchhcC--CCccceEec-hHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence 899999885 778999998 5666666554322 24556666666555554
No 380
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.81 E-value=3.1e-06 Score=78.24 Aligned_cols=282 Identities=17% Similarity=0.161 Sum_probs=160.3
Q ss_pred cCCC----cEEEecChHHHHHHHHHhhcCCCCeEEE-cCCC--CcC--hHHhHhhhcC----cEEEEEecCCCCCCcCCH
Q 046900 118 FDLN----RIVVTAGATAANELLTFILADPGDALLV-PTPY--YPG--FDRDLRWRTG----IKIVPIHCDSSNNFQITP 184 (442)
Q Consensus 118 ~~~~----~i~~t~G~~~ai~~~~~~l~~~gd~Vl~-~~p~--y~~--~~~~~~~~~G----~~v~~v~~~~~~~~~~d~ 184 (442)
++|+ ||-.-+| +.|+..+..+++.|+|+|.- .-|. |-. |...-+.-.. ++-.++.++++.+ -+|.
T Consensus 101 ldp~kWGVNVQp~SG-SPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG-~IDY 178 (477)
T KOG2467|consen 101 LDPEKWGVNVQPYSG-SPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG-YIDY 178 (477)
T ss_pred CCHHHCceeeccCCC-CchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC-ceeh
Confidence 5554 4544455 66788899999999999884 3332 211 1111110011 1222444554433 4689
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHH-HHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhc
Q 046900 185 QALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRS-VLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQ 263 (442)
Q Consensus 185 ~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~-~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~ 263 (442)
|.||+....+ ++|+|+- .+..|++. +..++.++|.+.+.+++.|-+|..........++..++..
T Consensus 179 D~Le~~A~~f-----rPk~iia------G~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~D--- 244 (477)
T KOG2467|consen 179 DKLEKTATLF-----RPKLIIA------GTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCD--- 244 (477)
T ss_pred HHHHHHHHhc-----CCcEEEe------ccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccc---
Confidence 9999988775 7776553 34455544 2556666777889999999998753333223344444432
Q ss_pred CCCCCcEEEEecCcccCCCCCceeEEEeecC-----------H---HHHHHHHHcccc---CCCcHHHHHHHHHHhc---
Q 046900 264 YKDSERVHIVYSLSKDLGLPGFRVGTIYSYN-----------D---KVVTTARRMSSF---TLISSQTQYLLASMLS--- 323 (442)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~-----------~---~~~~~~~~~~~~---~~~s~~~q~~~~~~l~--- 323 (442)
|+..+.+|.+ -|-|.|.|.-.. + .+.+.++..--+ ++.......+++-+|.
T Consensus 245 -------iVTTTTHKsL--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~ 315 (477)
T KOG2467|consen 245 -------IVTTTTHKSL--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM 315 (477)
T ss_pred -------eeeccccccc--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhC
Confidence 6788999976 788989887521 1 122222221111 2222223333333333
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCC
Q 046900 324 NKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKG-NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSS 402 (442)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~ 402 (442)
.+++ ++..++..++.+.|.+.|.+.|.+.... .-+-.+.+++....- +..-+++.++.-+|.+.--..
T Consensus 316 tpef-----k~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~------dGarvE~vle~~~I~~NKNtv 384 (477)
T KOG2467|consen 316 TPEF-----KEYQKQVLKNAKALASALISRGYKLVTGGTDNHLVLVDLRPKGV------DGARVEKVLELCHIALNKNTV 384 (477)
T ss_pred CHHH-----HHHHHHHHHHHHHHHHHHHHcCceEecCCccceEEEEeccccCC------chHHHHHHHHHhhhhhcCCcC
Confidence 3343 5566777888899999999999888653 333455667765321 123344555554666543333
Q ss_pred CCC---CCCCEEEEEeecC-----CHHHHHHHHHHHHHHHH
Q 046900 403 CHC---SEPGWFRVCFANM-----SEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 403 f~~---~~~~~iRls~~~~-----~~e~i~~~l~~l~~~l~ 435 (442)
++. -.++.+||+...+ -++++++..+-|.+.++
T Consensus 385 pGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 385 PGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred CCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 321 2356799986533 46777777776666544
No 381
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.80 E-value=4.2e-06 Score=79.51 Aligned_cols=299 Identities=14% Similarity=0.144 Sum_probs=158.3
Q ss_pred CCcEEEecChHH-HHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCC-CCCcCCHHHHHHHHHHHH
Q 046900 120 LNRIVVTAGATA-ANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS-NNFQITPQALEAAYKEAE 195 (442)
Q Consensus 120 ~~~i~~t~G~~~-ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~-~~~~~d~~~l~~~l~~~~ 195 (442)
....++.+.+|. .+.+.+.++. ..++.|+.+.-.+..-..++. ..|++++.||...+ +....|.+.+++.+++.
T Consensus 74 ~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~-~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~- 151 (389)
T PF05889_consen 74 VKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIE-RAGLEPVVVENVLEGDELITDLEAIEAKIEEL- 151 (389)
T ss_dssp HCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHH-HTT-EEEEE-EEEETTEEEEHHHHHHHHHHHH-
T ss_pred ccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHH-hcCCeEEEeeccCCCCeeeccHHHHHHHHHHh-
Confidence 356777776554 3444455553 456888887665544445555 38999999985433 23455788999988653
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEec
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYS 275 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S 275 (442)
|....+.+++.++--.|.. .+++++|+++|++||++.|+..+|+- -. ..-+..+...... ...-+++.|
T Consensus 152 --G~~~iLcvltttscfapr~--~D~i~~IakiC~~~~IPhlvNnAYgv---Q~--~~~~~~i~~a~~~--GRvda~vqS 220 (389)
T PF05889_consen 152 --GADNILCVLTTTSCFAPRL--PDDIEEIAKICKEYDIPHLVNNAYGV---QS--SKCMHLIQQAWRV--GRVDAFVQS 220 (389)
T ss_dssp --CGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTT---T---HHHHHHHHHHHHH--STCSEEEEE
T ss_pred --CCCCeEEEEEecCccCCCC--CccHHHHHHHHHHcCCceEEccchhh---hH--HHHHHHHHHHHhc--CCcceeeee
Confidence 4455667777665444443 34699999999999999999999983 11 1111111111000 122256789
Q ss_pred CcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHh--cCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 276 LSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASML--SNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 276 ~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
.-|.| +-+..-+-+.++++.....+.....--...++.......++ ....| ..-+.++.+.+...++.+.+.-++.
T Consensus 221 ~dkNF-~VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG~~g~-~~ll~~r~~~f~~l~erl~~~aee~ 298 (389)
T PF05889_consen 221 TDKNF-MVPVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLGCTGY-GALLKERKASFPYLKERLKKWAEEV 298 (389)
T ss_dssp HHHHH-CEESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCE-EecCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998 56665667777777666665543332122233333333333 22222 2333344444443344443333444
Q ss_pred CCeeec-CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEE----EeCCCCCCC-----CCCCEEEEEee-cCCHHH
Q 046900 354 GIECLK-GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLN----ISPGSSCHC-----SEPGWFRVCFA-NMSEQT 422 (442)
Q Consensus 354 g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~----v~pg~~f~~-----~~~~~iRls~~-~~~~e~ 422 (442)
+-.+.. |.-..-+.+.++....... .+...|...|..+ ||. |.|+..+.. ..-.|+-++.+ .+++||
T Consensus 299 ~e~ll~~p~N~is~a~tl~~l~~~~~-k~~~~lgs~Lf~R-~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~ee 376 (389)
T PF05889_consen 299 GERLLETPRNHISMAFTLDTLYEISQ-KDGTFLGSMLFKR-GVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREE 376 (389)
T ss_dssp TEEBSSSTT-SSEEEEE-TTCCTCCS-SHHHHHHHHHHHT-TEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHH
T ss_pred hhhhcCCCCCCeeEEEECccchhhcc-chhhhHHHHHHhC-CcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHH
Confidence 533322 3333345556654322111 2456777777666 664 333322211 01257777433 559999
Q ss_pred HHHHHHHHHHHHH
Q 046900 423 LEVALKRIHNFMQ 435 (442)
Q Consensus 423 i~~~l~~l~~~l~ 435 (442)
++.++++|.++++
T Consensus 377 vd~~v~rL~k~i~ 389 (389)
T PF05889_consen 377 VDYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999875
No 382
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.78 E-value=1.9e-06 Score=81.25 Aligned_cols=320 Identities=16% Similarity=0.212 Sum_probs=175.5
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC--C-----C-----CeEE-EcCCCCcChHHhH
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD--P-----G-----DALL-VPTPYYPGFDRDL 161 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~--~-----g-----d~Vl-~~~p~y~~~~~~~ 161 (442)
.+..-..+.+-..+.+..|+. ...|.|+--.|+...+..+.-+--+ | | +-|+ +.+-+|.++..++
T Consensus 137 PvF~lmE~~vl~km~~ivGw~--~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaA 214 (510)
T KOG0629|consen 137 PVFVLMEEEVLAKMREIVGWE--EGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAA 214 (510)
T ss_pred ceEEeehHHHHHHHHHHhCCC--CCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHH
Confidence 343344445555555555532 2245555444455444443322100 1 1 3444 3456777777777
Q ss_pred hhhcC---cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 162 RWRTG---IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 162 ~~~~G---~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
.. +| -+++.|+.++.| ++++++||+.|.+...+|..+-.|-.+.-+.-.|.. +.+..|+++|++|++|+.+
T Consensus 215 a~-lg~gtd~c~~v~t~e~G--km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~lWmHv 288 (510)
T KOG0629|consen 215 AF-LGLGTDHCIKVKTDERG--KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHKLWMHV 288 (510)
T ss_pred HH-hccCCceeEEecccccC--ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcCEEEEe
Confidence 74 77 688899988765 589999999998876655444222222223444555 4588999999999999999
Q ss_pred eccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--------CCC
Q 046900 239 DEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--------TLI 310 (442)
Q Consensus 239 De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--------~~~ 310 (442)
|.+|+...+-+..+........ +-+ -+.++.+|.+| +.+.++..+...+-+.+.+++.... +-+
T Consensus 289 DAAwGGglLmS~k~R~kl~Gie------ra~-SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~Ydv 360 (510)
T KOG0629|consen 289 DAAWGGGLLMSRKHRHKLTGIE------RAN-SVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDV 360 (510)
T ss_pred ecccccccccChhhHhhccCcc------ccC-ceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeec
Confidence 9999863322222211111111 112 24579999998 7799998887555555444332111 111
Q ss_pred c-----HHHHHH-----H--HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCee-ec--CCceEEEEEecCCcc
Q 046900 311 S-----SQTQYL-----L--ASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIEC-LK--GNAGLFCWMNLSPLL 374 (442)
Q Consensus 311 s-----~~~q~~-----~--~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~--~~~g~~~~~~~~~~~ 374 (442)
| -..|-. . =-+++..++ +-.++..+.+-+..+++.+.|++. |+.. .. |+...+.+--+|..+
T Consensus 361 S~DTgdK~iQCGRh~D~FKlWlmwkaKG~--~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~l 438 (510)
T KOG0629|consen 361 SYDTGDKAIQCGRHVDVFKLWLMWKAKGT--QGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSL 438 (510)
T ss_pred ccccccchhhcCccccHHHHHHHHHhccc--ccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHh
Confidence 1 111211 1 111222111 123455677778889999999887 3332 22 553333333344332
Q ss_pred cccC--hh-------hHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecC--CHHHHHHHHHHHHHHH
Q 046900 375 EEQT--RE-------GELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANM--SEQTLEVALKRIHNFM 434 (442)
Q Consensus 375 ~~~~--~~-------~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~--~~e~i~~~l~~l~~~l 434 (442)
.... .+ -+..+...++++ |....- ...-...+.++|+.+++. +.++++-+++.|..+-
T Consensus 439 R~~~~~~e~~~rL~kVaPkIK~~Mm~~-Gt~Mi~-YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlg 507 (510)
T KOG0629|consen 439 RGWQENPERDSRLVKVAPKIKERMMKK-GTTMIG-YQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLG 507 (510)
T ss_pred ccCcccchhhhHHHhhCcHHHHHHHhc-cceeeE-ecccccccchhheecccchhhhhhHHHHHHHHHHhc
Confidence 2111 01 123445666676 655442 111113357899988743 7788888888777653
No 383
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.69 E-value=2.5e-06 Score=76.86 Aligned_cols=185 Identities=22% Similarity=0.243 Sum_probs=120.6
Q ss_pred CCcccccCC-CcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCC-CCcChHHh--
Q 046900 85 FRENALFQD-YHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTP-YYPGFDRD-- 160 (442)
Q Consensus 85 ~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p-~y~~~~~~-- 160 (442)
+....+|+. .-|-..|....|+-++.. ...-..-+.+| +.||..++..+++|||..+...- -|....+.
T Consensus 54 f~~stGYGydD~GRdtLe~vyA~vf~aE------~a~VRpq~isG-THAI~~aLfg~LRpgDell~i~G~PYDTLeevIG 126 (416)
T COG4100 54 FTGSTGYGYDDLGRDTLERVYAQVFGAE------AALVRPQIISG-THAIACALFGILRPGDELLYITGSPYDTLEEVIG 126 (416)
T ss_pred cCCCCCCCccccchhHHHHHHHHHhccc------cceeeeeeecc-hhHHHHHHHhccCCCCeEEEecCCcchhHHHHhc
Confidence 444455542 246666777777766521 11223444554 78899999999999999885432 24333332
Q ss_pred --------HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCCcCCCHHHHHHHHHHHHh
Q 046900 161 --------LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITN-PSNPLGATIQRSVLEELLDFATR 231 (442)
Q Consensus 161 --------~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~-P~NPtG~~~~~~~l~~l~~~~~~ 231 (442)
++. .|++...+|+..++ .+|.+.+...+++ ++|+|.+.- ...----.++.+++++++++.++
T Consensus 127 ~rg~~~gSL~d-fgi~Y~~v~Lt~~g--kiD~~~v~~~i~~------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~ 197 (416)
T COG4100 127 LRGEGQGSLKD-FGIKYKAVPLTADG--KIDIQAVKTAISD------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKE 197 (416)
T ss_pred cCCCCcccHHH-hCcceeecccccCC--cccHHHHHHhcCc------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHh
Confidence 342 68888899988766 5999999999986 889887763 33322234788899999999876
Q ss_pred c--CcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce--eEEEeecCHHHHHH
Q 046900 232 K--NIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR--VGTIYSYNDKVVTT 300 (442)
Q Consensus 232 ~--~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R--iG~i~~~~~~~~~~ 300 (442)
- |+++++|.+|++|+-.-.+.. .. --++.+|+-|.-| .|+- .||+.+. +.+.+.
T Consensus 198 inpn~ivFVDNCYGEFvE~~EPt~----vG---------aDliAGSLIKNpG-GgiaktGGYiaGk-~~~ve~ 255 (416)
T COG4100 198 INPNVIVFVDNCYGEFVEEKEPTH----VG---------ADLIAGSLIKNPG-GGIAKTGGYIAGK-AELVEA 255 (416)
T ss_pred cCCCEEEEEeccchhhhhccCccc----cc---------hhhhccceeeCCC-Cceeeccceeech-HHHHHh
Confidence 5 799999999999874332211 11 1256788988765 4431 2788884 444444
No 384
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.57 E-value=2.9e-05 Score=75.67 Aligned_cols=282 Identities=19% Similarity=0.237 Sum_probs=142.8
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh---cCCCCeEEEcCCCCcChHHhHhh---hcCcE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL---ADPGDALLVPTPYYPGFDRDLRW---RTGIK 168 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~ 168 (442)
+|..+..-.+...+.+..| ++..|.=+-.|++.+-+.+..+. -+.+++|+++.-.|+.+...++. ..|++
T Consensus 106 QG~Lq~lfe~Qs~i~eLTG----mdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~ 181 (429)
T PF02347_consen 106 QGRLQALFEYQSMICELTG----MDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIE 181 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHT----SSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEE
T ss_pred HHHHHHHHHHHHHHHHhhC----CCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeE
Confidence 4554444445555655555 44444556667666665554333 23346999999999998875543 27899
Q ss_pred EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 169 v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
++.++.++.+. .| +.++.+|++.+||. .|.+-+ +++|.++++++|.++++ .+.- +...
T Consensus 182 iv~~~~~~~~~--~d--------------~~~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad~-~aL~ 239 (429)
T PF02347_consen 182 IVEVPLDEDGT--TD--------------DDDTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GADP-NALG 239 (429)
T ss_dssp EEEE-BBTTCS--B---------------STTEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGGC-CGCC
T ss_pred EEEecccccCC--cc--------------ccCeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecCH-HHHh
Confidence 99999876542 22 13888999999986 677744 88999999999988876 4432 1222
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCC----CCCceeEEEeecCHHHHHH------------------------
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLG----LPGFRVGTIYSYNDKVVTT------------------------ 300 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g----~~G~RiG~i~~~~~~~~~~------------------------ 300 (442)
. ..+..++.. -|++++ +|.|| ..|--.|++.+..+.++..
T Consensus 240 ~--l~~Pge~GA---------DI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtR 307 (429)
T PF02347_consen 240 G--LKSPGEYGA---------DIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTR 307 (429)
T ss_dssp T--C--GGGGT----------SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGG
T ss_pred C--cCChhhcCc---------cEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccc
Confidence 2 222223322 255664 66664 3355578888743322211
Q ss_pred ---HHHcccc-CCCcHHHHHH--HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCCc
Q 046900 301 ---ARRMSSF-TLISSQTQYL--LASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSPL 373 (442)
Q Consensus 301 ---~~~~~~~-~~~s~~~q~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~ 373 (442)
+++.... +.++..+..+ +..++.. +-.+-+++..+....+..++.+.|.+. +..+..+.---++....+.
T Consensus 308 EQHIrReKAtSNIctnqaL~A~~a~~Yl~~--~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~- 384 (429)
T PF02347_consen 308 EQHIRREKATSNICTNQALLALAAAIYLAY--LGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKD- 384 (429)
T ss_dssp TCHHHGCCSTT---SS-HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS--
T ss_pred cccccccchhhhhhhhHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCc-
Confidence 1111111 1122222222 2222221 224568888999999999999999985 3333322211122222221
Q ss_pred ccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHH
Q 046900 374 LEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRI 430 (442)
Q Consensus 374 ~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l 430 (442)
....++.++.... |+.... ...+.+-+|+.. -++++|+++++.+
T Consensus 385 ------~~~~~l~~~~~~~-gl~~~~------~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 385 ------KEVEELLKRGIEG-GLNLRY------PDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp ------HHHHHHHHTT-----EEEGG------G-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ------HHHHHHHHHHHhc-CCCccc------cCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 1233455555444 543321 234578888862 2788888887754
No 385
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.49 E-value=0.00012 Score=70.04 Aligned_cols=312 Identities=15% Similarity=0.185 Sum_probs=169.2
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCcc-----CC-CcEEEecChHHHHHHHHHhh-------cCCC-----------C-eE
Q 046900 93 DYHGLKSFRQAMASFMEQIRGGRAKF-----DL-NRIVVTAGATAANELLTFIL-------ADPG-----------D-AL 147 (442)
Q Consensus 93 ~~~g~~~lr~~ia~~l~~~~~~~~~~-----~~-~~i~~t~G~~~ai~~~~~~l-------~~~g-----------d-~V 147 (442)
.....++|.-.+.+|+.+..+.+... .. --|+-++ ++++...++.+- .+.+ + .+
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~t-ases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~ 185 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGT-ASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVA 185 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecC-cchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheE
Confidence 33456899999999999987643111 11 1233333 334433332221 1111 2 34
Q ss_pred EEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHH
Q 046900 148 LVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLD 227 (442)
Q Consensus 148 l~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~ 227 (442)
...+.++.++..++.. .|+++..++.++ +|.++.+.|.+++++...+|--+ .+++.+- .-|| +..-+++.+|..
T Consensus 186 Y~SDqahssveka~~i-~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIP-f~v~at~-GTT~-~ca~D~l~elg~ 259 (511)
T KOG0628|consen 186 YCSDQAHSSVEKACLI-AGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIP-FFVCATL-GTTS-SCAFDELEELGP 259 (511)
T ss_pred EecCcccchHHHhHhh-cceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCcc-EEEEEee-cCcc-ccccccHHHhcc
Confidence 5677888999988884 899999999876 89999999999999876655433 3333222 2233 334578999999
Q ss_pred HHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEe------------ecCH
Q 046900 228 FATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIY------------SYND 295 (442)
Q Consensus 228 ~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~------------~~~~ 295 (442)
+|+++++|+.+|.+|+...+.-+.+..+..-... -+. +-...||.+ +.-+-+.-+- +++-
T Consensus 260 Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~-----aDS--fn~n~hK~~-~vnfDCs~lWvkd~~~~~~~~~vdp~ 331 (511)
T KOG0628|consen 260 VCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEY-----ADS--FNFNPHKWL-LVNFDCSPLWVKDGTKLSRAFNVDPL 331 (511)
T ss_pred hhhhcCEEEEeehhhccccccCHHHHHHhhcchh-----hcc--ccCChhhee-EEeeeeecceeecCceeeeeeecChH
Confidence 9999999999999999765543333332221110 000 112335543 2222222111 1111
Q ss_pred HHHHHH-HHcccc--CCCc------HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeeec-C
Q 046900 296 KVVTTA-RRMSSF--TLIS------SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-----GIECLK-G 360 (442)
Q Consensus 296 ~~~~~~-~~~~~~--~~~s------~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~-~ 360 (442)
.+.... .....+ |.++ ++-.+.....+.... +++++ ++.-.|.+.++++ -+++.. .
T Consensus 332 yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~-lq~~i--------R~h~~La~~fe~lv~~d~~FE~~~~~ 402 (511)
T KOG0628|consen 332 YLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVEN-LQNYI--------REHVRLAKEFETLVRADPRFEIVNKR 402 (511)
T ss_pred hhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHH-HHHHH--------HHHHHHHHHHHHHhhcCCcceeeccc
Confidence 111111 111111 2211 222222222222211 12222 2222333333332 355543 3
Q ss_pred CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecC--CHHHHHHHHHHHHHHHHHH
Q 046900 361 NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANM--SEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 361 ~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~--~~e~i~~~l~~l~~~l~~~ 437 (442)
.-| .+.+++... ...-.++..++-....|.+.|.+. .+.-.+|++++.. ++++++++.+.|.+....+
T Consensus 403 ~lg-LvcFRlk~~-----N~~ne~Ll~~in~~g~i~l~~~~l---~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 403 ILG-LVCFRLKGD-----NEINEALLNRLNSSGRIHLVPASL---HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred ccc-eeEEeecCC-----cHHHHHHHHHHHhcCcEEEEEeee---cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 444 333455442 123567777877777799998664 3345689988732 7889999999998877663
No 386
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.44 E-value=0.00047 Score=65.73 Aligned_cols=270 Identities=19% Similarity=0.244 Sum_probs=154.8
Q ss_pred cCCCcEEEecChHHHHHHHHHhh---cCCCCeEEEcCCCCcChHHhHhhh---cCcEEEEEecCCCCCCcCCHHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFIL---ADPGDALLVPTPYYPGFDRDLRWR---TGIKIVPIHCDSSNNFQITPQALEAAY 191 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~~---~G~~v~~v~~~~~~~~~~d~~~l~~~l 191 (442)
++-.|-=+-.++|.+-+.+..+. -.+..+++++.-+|+.+...++.+ .|.+++.++.+ |.+.|++.
T Consensus 135 m~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~- 206 (450)
T COG0403 135 LDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA- 206 (450)
T ss_pred CCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc-
Confidence 44455556667776666665444 223589999999999998887653 56777777654 56777766
Q ss_pred HHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE-eccCCcCCCCCCCcccHHHHHhhhcCCCCCcE
Q 046900 192 KEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS-DEIYSGSAFSSSEFVSIAEILEARQYKDSERV 270 (442)
Q Consensus 192 ~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~-De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~v 270 (442)
.+ ..+-++++.+|+. .|.. .+++.+|.+.+++++.++++ =|.-+... ..+..++ +--
T Consensus 207 ~~-----~~~~gv~vQyP~~-~G~~--~~d~~~l~~~~h~~~al~~v~aDplaL~L-----L~pPGe~---------GAD 264 (450)
T COG0403 207 DD-----GDVFGVLVQYPNT-FGIV--EEDLRALIEAAHSAGALVIVAADPLALGL-----LKPPGEF---------GAD 264 (450)
T ss_pred cc-----cCeEEEEEecCCC-CCcc--chhHHHHHHHHhhcCCEEEEEechhHhhc-----cCCcccc---------CCc
Confidence 32 2677889998873 5632 34689999999999876654 22211111 1122222 333
Q ss_pred EEEecCcc---cCCCCCceeEEEeecCHHHHHH---------------------------HHHcccc-CCCcHHHHHHHH
Q 046900 271 HIVYSLSK---DLGLPGFRVGTIYSYNDKVVTT---------------------------ARRMSSF-TLISSQTQYLLA 319 (442)
Q Consensus 271 i~~~S~SK---~~g~~G~RiG~i~~~~~~~~~~---------------------------~~~~~~~-~~~s~~~q~~~~ 319 (442)
|++++... -+|..|-.+||..+.++..++. +++-... ..|+.....+.+
T Consensus 265 IvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~ 344 (450)
T COG0403 265 IVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALA 344 (450)
T ss_pred eEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHH
Confidence 77776544 3556677888888743332211 1111111 222322222222
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeecCCceEE--EEEecCCcccccChhhHHHHHHHHHHcCcE
Q 046900 320 SMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA--GIECLKGNAGLF--CWMNLSPLLEEQTREGELALWDSMLHEVKL 395 (442)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi 395 (442)
+.+--.-+-.+-++++.++..+...++.+.|++. |+++... .|| +.++++. +....+.++.... |+
T Consensus 345 As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~-------~~~~~l~~~~~~~-G~ 414 (450)
T COG0403 345 ASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPE-------EVAEALLAAAIAG-GI 414 (450)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecch-------hHHHHHHHHHHhc-CC
Confidence 1111101113457888888899999999999965 5666543 444 3334442 1244555555444 77
Q ss_pred EEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHH
Q 046900 396 NISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNF 433 (442)
Q Consensus 396 ~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~ 433 (442)
-++.- ....+-+++. ..++++++.+++.+...
T Consensus 415 ~L~~~------~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 415 NLRRV------DADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ceeee------cCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 66541 2335666665 22678888888877654
No 387
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.30 E-value=4.8e-07 Score=85.14 Aligned_cols=213 Identities=21% Similarity=0.219 Sum_probs=48.1
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCC---Cc---ChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHH
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALLVPTPY---YP---GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYK 192 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~---y~---~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~ 192 (442)
..+..+++|+...|+.+++.+|. +|..|++..-. +. .+.+.++. .|++++.|-... .-.+++++++|.
T Consensus 61 gAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip~vm~~-sGa~lvEVGttN----~t~~~Dye~AI~ 134 (367)
T PF03841_consen 61 GAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIPDVMRQ-SGARLVEVGTTN----RTHLSDYEKAIT 134 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccc-ccccccccccccccccccccccccccc-cccccccccccc----cccccccccccc
Confidence 36788999999999999998886 45566664321 22 24456664 899999887542 235788999998
Q ss_pred HHHhcCCceeEEEEeCCCCCC--CcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC----CCCCCcccHHHHHhhhcCCC
Q 046900 193 EAESKDMRVRGVLITNPSNPL--GATIQRSVLEELLDFATRKNIHLVSDEIYSGSA----FSSSEFVSIAEILEARQYKD 266 (442)
Q Consensus 193 ~~~~~~~~~~~v~l~~P~NPt--G~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~----~~~~~~~s~~~~~~~~~~~~ 266 (442)
+ +|.+++..+++|-. |..-. -.++++++++++|++++++|-.-+.+. |+-+.-+++.....
T Consensus 135 e------~Ta~ll~Vh~Sn~~i~GFt~~-~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~------ 201 (367)
T PF03841_consen 135 E------NTAALLKVHTSNFRIQGFTGE-VSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLA------ 201 (367)
T ss_dssp ---------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCC------
T ss_pred c------ccccccccccccccccccccc-ccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhh------
Confidence 7 88899899988863 32222 138899999999999999998764221 11111123333322
Q ss_pred CCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--cccCCCcHHHHHHHHHHhcC----chh-----HHHHHHHH
Q 046900 267 SERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSFTLISSQTQYLLASMLSN----KKF-----TENYIKTN 335 (442)
Q Consensus 267 ~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~----~~~-----~~~~~~~~ 335 (442)
.+--+++.|-.|.+| |-+.|.|++ ...+++.+++. ....-+......++.+.|.. ... ..+.+...
T Consensus 202 ~GaDlV~fSGdKlLG--GPQaGiI~G-kk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~ 278 (367)
T PF03841_consen 202 AGADLVTFSGDKLLG--GPQAGIIVG-KKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQS 278 (367)
T ss_dssp CT-SEEEEETTSSSS--S-S-EEEEE-EHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH--------------------
T ss_pred cCCCEEEEECCCcCC--CCCeEEEEe-CHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccc
Confidence 345578889999986 556899999 56666666642 22344555555555444431 110 01223444
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 046900 336 RERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 336 ~~~~~~~~~~l~~~L~~~ 353 (442)
.+.++++.+.+...|...
T Consensus 279 ~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 279 LEELRARAERLAAQLKAA 296 (367)
T ss_dssp ------------------
T ss_pred cccccccccccccccccc
Confidence 566666666676666543
No 388
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.24 E-value=0.00031 Score=69.89 Aligned_cols=312 Identities=14% Similarity=0.183 Sum_probs=178.7
Q ss_pred cccccCC---CcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe--cC---hHHHHHHHHHhhcCCC----CeEEEcCCCC
Q 046900 87 ENALFQD---YHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT--AG---ATAANELLTFILADPG----DALLVPTPYY 154 (442)
Q Consensus 87 ~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t--~G---~~~ai~~~~~~l~~~g----d~Vl~~~p~y 154 (442)
.++-|.| .+|+.++-..+..++....| -|++.+- +| -..++..+-..+...| ...++|.-.+
T Consensus 567 nIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG------~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAH 640 (1001)
T KOG2040|consen 567 NIHPFAPVEQAQGYQQLFTELEKDLCEITG------FDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAH 640 (1001)
T ss_pred cCCCCCchHHHhhHHHHHHHHHHHhheeec------ccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeeccc
Confidence 3444444 36888888888888886544 3444443 33 2345555544444444 3567788888
Q ss_pred cChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCc
Q 046900 155 PGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNI 234 (442)
Q Consensus 155 ~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~ 234 (442)
..-...+.. +|++|++|.++..++ +|..+|.+..+++. .+..++.++.|+. .|+. .+.+++++++..+||-
T Consensus 641 GTNPASA~M-agmkvvpV~~~~~G~--id~~dLk~kaekh~---~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGG 711 (1001)
T KOG2040|consen 641 GTNPASAAM-AGMKVVPVGCDANGN--IDMVDLKAKAEKHK---DNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGG 711 (1001)
T ss_pred CCChhhHHh-cCCEEEEeeccCCCC--ccHHHHHHHHHHhh---hhhheeEEecccc-cccc--cccHHHHHHHHHhcCC
Confidence 877777775 999999999987664 89999998877653 3566788888864 2332 3458999999999999
Q ss_pred EEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC----CceeEEEeecCHHHHHHHHH-------
Q 046900 235 HLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP----GFRVGTIYSYNDKVVTTARR------- 303 (442)
Q Consensus 235 ~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~----G~RiG~i~~~~~~~~~~~~~------- 303 (442)
-|..|.+...-..+ ..+.-.+..+ +.=-.++|+|+.| |-.+|=|.. .+.+...+-.
T Consensus 712 QVYlDGANMNAqVG---lc~pGd~GaD---------V~HLNLHKTFcIPHGGGGPg~gPIgV-K~HLapfLP~HpVvs~~ 778 (1001)
T KOG2040|consen 712 QVYLDGANMNAQVG---LCRPGDIGAD---------VCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSPG 778 (1001)
T ss_pred EEEecCCCccceec---ccCCcccccc---------ceeecccceeeecCCCCCCCCCccch-hhhccccCCCCCccCCC
Confidence 99999997642221 1111111111 2223677877544 222333332 2222222111
Q ss_pred ----cc-------ccCCCcH--HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc--eEEEE
Q 046900 304 ----MS-------SFTLISS--QTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNA--GLFCW 367 (442)
Q Consensus 304 ----~~-------~~~~~s~--~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--g~~~~ 367 (442)
.. .+|+.+. +..++-..+....+. +...+.---+..+|...|+.+ .+-+....+ +-=+.
T Consensus 779 ~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL-----~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFI 853 (1001)
T KOG2040|consen 779 RPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGL-----KDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFI 853 (1001)
T ss_pred CCCCCCCccceeccCCCcceeehhHHHHHHHhccccc-----chhhHHHhhhhHHHHHHHhhccceeEecCCcceeeeee
Confidence 00 1111111 234455555555442 222222333567888888875 333333222 11133
Q ss_pred EecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 368 MNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 368 ~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
+++.++....+. ++.+++++|. .||+.-..-++ +-.+.+-|-.. ..+.+++++++++|..+-++
T Consensus 854 lD~r~fK~~agi-eavDvAKRL~-DYgFHaPTmsw---PV~gtLMIEPTESE~k~ElDRfcdAliSIreE 918 (1001)
T KOG2040|consen 854 LDLRPFKKTAGI-EAVDVAKRLM-DYGFHAPTMSW---PVAGTLMIEPTESEDKAELDRFCDALISIREE 918 (1001)
T ss_pred eechhhccccCC-cHHHHHHHHH-hccCCCCcccc---ccCCceEeccCccccHHHHHHHHHHHHHHHHH
Confidence 566655443333 4778888884 55987544333 23466666554 22678899999988766444
No 389
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.21 E-value=7.2e-05 Score=69.14 Aligned_cols=217 Identities=13% Similarity=0.157 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhh
Q 046900 184 PQALEAAYKEAESKDMRVRGVLITNPSNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEAR 262 (442)
Q Consensus 184 ~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~ 262 (442)
++++|+.|.++.+++..+.++++..-+...|. -.|++-.++|.++|++|++.+|+||+.-...-+|. ++..-...-
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk-~WaHehw~l-- 331 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGK-FWAHEHWNL-- 331 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCc-eeeehhcCC--
Confidence 68889999988766555555555433666664 56888899999999999999999999875333332 211111111
Q ss_pred cCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHH-HHHHccccCCCcHHHHHH---HHHHhcCchhHHHHHHHHHHH
Q 046900 263 QYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVT-TARRMSSFTLISSQTQYL---LASMLSNKKFTENYIKTNRER 338 (442)
Q Consensus 263 ~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~-~~~~~~~~~~~s~~~q~~---~~~~l~~~~~~~~~~~~~~~~ 338 (442)
+.+.. +-+|||-| ..| ||..- .+..-. ..+.+.+ |...+.-... +...+++.+ +.+.
T Consensus 332 --~~PpD---~vTFSKK~-q~g---Gffh~-~~frpn~pYrifNT-WmGdP~k~lll~~vv~~I~~~~--------Ll~n 392 (484)
T KOG1405|consen 332 --DSPPD---VVTFSKKF-QTG---GFFHD-EEFRPNEPYRIFNT-WMGDPSKNLLLEEVVQEIKRED--------LLNN 392 (484)
T ss_pred --CCCcc---ceehhhhh-hcC---ccccC-cccCCCchHHHhhh-hcCChHHHHHHHHHHHHHhHHH--------HHHH
Confidence 11222 34899999 466 67654 221111 2222222 3333322222 223333332 2223
Q ss_pred HHHHHHHHHHHHHhC-----C-CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEE
Q 046900 339 LQKRYQMIIEGLRSA-----G-IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFR 412 (442)
Q Consensus 339 ~~~~~~~l~~~L~~~-----g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iR 412 (442)
.+..-+.|...|.++ | +.-... .|.|+.+++|.... ...++..+ +.+||.+--| +...||
T Consensus 393 ~~~vG~~l~~gL~~Lq~~~p~~~~~~RG-rGTF~a~d~ps~~~------Rdk~i~~~-~~nGv~~GGC------g~~siR 458 (484)
T KOG1405|consen 393 VAHVGKALLKGLLELQAKYPGKINNLRG-RGTFIAWDCPSGSI------RDKLILIA-RLNGVNLGGC------GDKSIR 458 (484)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhhcccc-cceEEEEeCCChHH------HHHHHHHH-HHcCceeccc------ccceee
Confidence 333344444444332 1 222233 45577779887422 34555555 4448876432 234566
Q ss_pred EEeecC-CHHHHHHHHHHHHHHHHH
Q 046900 413 VCFANM-SEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 413 ls~~~~-~~e~i~~~l~~l~~~l~~ 436 (442)
+..+-. .+...+-+++++.+++..
T Consensus 459 fRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 459 FRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred eccceeehhhhHHHHHHHHHHHhcc
Confidence 654411 567788888888887753
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.06 E-value=0.0018 Score=68.93 Aligned_cols=262 Identities=18% Similarity=0.167 Sum_probs=143.6
Q ss_pred cCCCcEEEecChHHHHH---HHHHhhcCCCCeEEEcCCCCcChHHhHhhh---cCcEEEEEecCCCCCCcCCHHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANE---LLTFILADPGDALLVPTPYYPGFDRDLRWR---TGIKIVPIHCDSSNNFQITPQALEAAY 191 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~---~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~---~G~~v~~v~~~~~~~~~~d~~~l~~~l 191 (442)
++..|-=+-.|++.+-+ ++.+.--.+..+|+++.-.+|.+...++.+ .|++++. +++++.+
T Consensus 139 m~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~ 205 (954)
T PRK12566 139 LDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLA 205 (954)
T ss_pred chhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcC
Confidence 34334334446555444 333222122468999999999988776543 5666553 2233322
Q ss_pred HHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEE
Q 046900 192 KEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVH 271 (442)
Q Consensus 192 ~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi 271 (442)
. .++.++++.+|+. .|.+ +++++|.+++++++.++| +.+.- +..+ -..+..++ +--|
T Consensus 206 ~------~~~~~v~vq~P~~-~G~i---~d~~~i~~~~h~~gal~~-~~~d~-laL~--ll~~Pge~---------GADI 262 (954)
T PRK12566 206 A------HAVFGALLQYPDT-HGEI---RDLRPLIDQLHGQQALAC-VAADL-LSLL--VLTPPGEL---------GADV 262 (954)
T ss_pred C------CCEEEEEEECCCC-ceEE---ccHHHHHHHHHHcCCEEE-EEeCH-HHHh--CCCChhhc---------CCcE
Confidence 2 2577888999975 6877 348899999999887755 33311 1111 12222333 2235
Q ss_pred EEe---cCcccCCCCCceeEEEeecCHHHHHHH----------------------------HHcccc-CCCcHHHHHHHH
Q 046900 272 IVY---SLSKDLGLPGFRVGTIYSYNDKVVTTA----------------------------RRMSSF-TLISSQTQYLLA 319 (442)
Q Consensus 272 ~~~---S~SK~~g~~G~RiG~i~~~~~~~~~~~----------------------------~~~~~~-~~~s~~~q~~~~ 319 (442)
+++ +|.=-+|..|--.||+.+.+ .+...+ ++-... +.++..+..+..
T Consensus 263 ~vG~~Q~fGvp~~~GGP~ag~~a~~~-~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~ 341 (954)
T PRK12566 263 VLGSTQRFGVPMGYGGPHAAYFACRD-DYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANI 341 (954)
T ss_pred EeeCCCcCCCCCCCCCCCeeeeeehH-HHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHH
Confidence 565 34444555566678888843 332211 111111 112222222222
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeC
Q 046900 320 SMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISP 399 (442)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~p 399 (442)
+.+----+-.+-+++..++...+..++.+.|.+.|++.... .||=-+.+.-.. .+.++.+..++. ||-++-
T Consensus 342 a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~--~fF~~~~v~~~~------~~~~~~~~a~~~-~~n~r~ 412 (954)
T PRK12566 342 AGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR--HFFDTLTLEVGG------AQAAIIESAEAA-RINLRI 412 (954)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CccceEEEEccC------CHHHHHHHHHHC-CCeeEE
Confidence 21110001134477778888888889999999888876433 445332222110 145666666665 887764
Q ss_pred CCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHH
Q 046900 400 GSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIH 431 (442)
Q Consensus 400 g~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~ 431 (442)
- +++.+.||+. +.+.++++.++..+.
T Consensus 413 ~------~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 413 L------GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred e------CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 2 2456888886 337888888888774
No 391
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.91 E-value=0.0082 Score=56.48 Aligned_cols=332 Identities=13% Similarity=0.136 Sum_probs=165.8
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec-
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA- 127 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~- 127 (442)
.+.||+.+-..+|++.+.++-+....... .|.+-. +..+ ...-...+.+...+.+.+.++ ++-+. .|++..
T Consensus 5 ~~~nFsaGPa~lp~~vL~~a~~e~~~~~g--~g~svm-e~SH--Rsk~~~~v~~~a~~~lreLl~--iPd~Y-~VlflqG 76 (365)
T COG1932 5 RVYNFSAGPAALPPEVLQQAQKELLDWNG--LGMSVM-EISH--RSKEFKNVLEEAEKDLRELLN--IPDDY-KVLFLQG 76 (365)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhhhcc--CCccee-eecc--ccHHHHHHHHHHHHHHHHHhC--CCCCc-eEEEEcC
Confidence 34588988777887766665544332111 011000 0111 111123444444445555544 32222 465555
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH-hHhhhcCc--EEEEEecCCCCCCc--CCHHHHHHHHHHHHhcCCcee
Q 046900 128 GATAANELLTFILADPGDALLVPTPYYPGFDR-DLRWRTGI--KIVPIHCDSSNNFQ--ITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~-~~~~~~G~--~v~~v~~~~~~~~~--~d~~~l~~~l~~~~~~~~~~~ 202 (442)
|++....++...|+.++..-.+..-.|..+.. -++ ..+. ++.... ..+.+|. ++++... +. .+..
T Consensus 77 Gat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~-~~~~~~~~~~~~-~~~~~~~~iP~~~~~~--~~------~~~a 146 (365)
T COG1932 77 GATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAK-KVGKQPKLIDAR-IEEAGYGSIPDLSKWD--FS------DNDA 146 (365)
T ss_pred ccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHH-Hhcccccccccc-eeccCccCCCChhhcc--cC------CCcc
Confidence 58888888888887655321233333443322 223 2343 222222 1222222 3333322 11 1222
Q ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC
Q 046900 203 GVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL 282 (442)
Q Consensus 203 ~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 282 (442)
-|.+|.-..-+|+-++. ...+ .. +.++|.|-.-.-+. ....+..++ ++..|.-|.+|.
T Consensus 147 yv~~~~NeTi~Gv~v~~--~p~~---~~--~~~~v~D~SS~ils----r~iDvsk~d-----------viyagaQKnlGp 204 (365)
T COG1932 147 YVHFCWNETISGVEVPE--LPDI---GS--DGLLVADASSAILS----RPIDVSKYD-----------VIYAGAQKNLGP 204 (365)
T ss_pred EEEEecCCcccceEccC--CCCC---CC--CceEEEecccHHhc----CCCChhHcc-----------eEEEehhhccCc
Confidence 35666444456776651 1111 11 26788887755322 223443332 445789999998
Q ss_pred CCceeEEEeecCHHHHHHHHHc---------------cccCCCcHHHHHHHHHHhcCchhHHHH--HHHHHHHHHHHHHH
Q 046900 283 PGFRVGTIYSYNDKVVTTARRM---------------SSFTLISSQTQYLLASMLSNKKFTENY--IKTNRERLQKRYQM 345 (442)
Q Consensus 283 ~G~RiG~i~~~~~~~~~~~~~~---------------~~~~~~s~~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ 345 (442)
.| ++.++.++ .+.+..+.. ..+.+.++.+-+.+...+ +|+... ++.+.++-.++.+.
T Consensus 205 aG--ltvvIvr~-~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~---~Wlk~~GGl~~~~~rn~~ka~~ 278 (365)
T COG1932 205 AG--LTVVIVRP-DLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVF---KWLKSQGGLEALEARNQAKAQL 278 (365)
T ss_pred cc--eEEEEEcH-HHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHH---HHHHHcCCHHHHHHHHHHHHHH
Confidence 88 78888854 444333322 111222233333222222 232211 45556666777888
Q ss_pred HHHHHHhCCCee---e-cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCH
Q 046900 346 IIEGLRSAGIEC---L-KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSE 420 (442)
Q Consensus 346 l~~~L~~~g~~~---~-~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~ 420 (442)
|.+.+.+.++-- . ...+-+.+.+++... +-+..+..++.++ |+...-|.. ..+.+|+++. +++.
T Consensus 279 LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~------~ld~~fv~eae~~-gl~~lkGhr----~vgGmRasiynA~~~ 347 (365)
T COG1932 279 LYDWIDKSDFYRNLVAKANRSRMNVTFTLVDA------ELDKGFVAEAEAA-GLIYLKGHR----SVGGLRASIYNAVPL 347 (365)
T ss_pred HHHHHHhCCccccccchhhccceeEEEEcCcH------HHHHHHHHHHHHc-CCceecccc----CCCceeeeeecCCCH
Confidence 899988764321 1 234556666666532 1245566666555 888777732 2344999987 4577
Q ss_pred HHHHHHHHHHHHHHHHH
Q 046900 421 QTLEVALKRIHNFMQKR 437 (442)
Q Consensus 421 e~i~~~l~~l~~~l~~~ 437 (442)
|+++.+++-+..+.+++
T Consensus 348 e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 348 EDVEALTDFMDWFEETY 364 (365)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 87777777666665543
No 392
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.51 E-value=0.0055 Score=54.73 Aligned_cols=292 Identities=17% Similarity=0.204 Sum_probs=135.2
Q ss_pred hHHHHHHHHHhhcC--CCC-eEEEcCC-CCcChHHhHhhhcCcEEEEEe-cCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 129 ATAANELLTFILAD--PGD-ALLVPTP-YYPGFDRDLRWRTGIKIVPIH-CDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 129 ~~~ai~~~~~~l~~--~gd-~Vl~~~p-~y~~~~~~~~~~~G~~v~~v~-~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
....+.+.+..+.. |.. .|+-+.- .-..+...+. .|++.+-+. +.+.+...-|++.+++.+++. |+.. .
T Consensus 85 tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~--agfepiiie~i~d~d~l~tdleav~~~iee~---g~dc-i 158 (432)
T KOG3843|consen 85 TGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIH--AGFEPIIIENILDGDELITDLEAVEAIIEEL---GEDC-I 158 (432)
T ss_pred ccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHh--cCCCceeeeccccchHHHHhHHHHHHHHHHh---CCce-E
Confidence 33445566666633 433 3332222 2233333332 788877764 333334555788888888764 3332 2
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC-cccHHHHHhhhcCCCCCcEEEEecCcccCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE-FVSIAEILEARQYKDSERVHIVYSLSKDLGL 282 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~-~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 282 (442)
+++-+. ...=..-+++.+++|..+|..|+++-|+..+|+. .... ..-+... .+. ...-.++.|+-|.|-+
T Consensus 159 lci~st-tscfapr~pd~leaiaaica~~diphivnnaygl---qsee~i~~iaa~-~~~----grida~vqsldknf~v 229 (432)
T KOG3843|consen 159 LCIHST-TSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGL---QSEECIHKIAAA-AEC----GRIDAFVQSLDKNFMV 229 (432)
T ss_pred EEEeec-ccccCCCCCchHHHHHHHHHccCchhhhcccccc---chHHHHHHHHHH-hhh----ccHHHHHHHhhhccee
Confidence 222111 1111123567899999999999999999999983 2211 1111111 110 0112346799999864
Q ss_pred CCceeEEEe-ecCHHHHHHHHHccccCCCcHHHHHHHHHHhc--CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCee-e
Q 046900 283 PGFRVGTIY-SYNDKVVTTARRMSSFTLISSQTQYLLASMLS--NKKFTENYIKTNRERLQKRYQMIIEGLRSAGIEC-L 358 (442)
Q Consensus 283 ~G~RiG~i~-~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~ 358 (442)
| . .|.++ +-++..++.+.++..--..++++.-.+..+|. .-.+ .+-+.+..+.+...|..+...-+.+|-.+ .
T Consensus 230 p-v-ggaiia~fk~n~iq~iak~ypgrasa~ps~dllitll~~gqn~f-~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~ 306 (432)
T KOG3843|consen 230 P-V-GGAIIAAFKDNFIQEIAKMYPGRASASPSLDLLITLLSLGQNAF-KELFGEQKEMFLKLRNKIIKFAEAIGECLLE 306 (432)
T ss_pred e-c-chhHhhHhHHHHHHHHHHhCCCccccCccHHHHHHHHHhchhHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 4 1 13333 22333343333332222223333333333333 2223 23334444444444444444444433222 2
Q ss_pred cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcE---EEeCCCCC------------CC----CCCCEEEEEee-cC
Q 046900 359 KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKL---NISPGSSC------------HC----SEPGWFRVCFA-NM 418 (442)
Q Consensus 359 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi---~v~pg~~f------------~~----~~~~~iRls~~-~~ 418 (442)
.|+...-....+....... +.+..++-.++-..|| .|.|.+.. +. ..-+|+-+..+ .+
T Consensus 307 ~p~n~is~amtl~ti~~~k--~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm 384 (432)
T KOG3843|consen 307 TPENEISLAMTLKTIDEAK--DKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGM 384 (432)
T ss_pred CCCchhhhhhhhccCChHH--hhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCchhHhhHHHhcCC
Confidence 2333222222222211111 0122222222222243 34443321 11 11134444333 34
Q ss_pred CHHHHHHHHHHHHHHHHHHHhh
Q 046900 419 SEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 419 ~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
+..++++++.||.+.+.+.++.
T Consensus 385 ~~hdld~~~~rl~~~~a~~~ke 406 (432)
T KOG3843|consen 385 KDHDLDEFFNRLDRCLAAFRKE 406 (432)
T ss_pred cHhHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999988876654
No 393
>PLN02672 methionine S-methyltransferase
Probab=97.42 E-value=0.0084 Score=65.38 Aligned_cols=191 Identities=16% Similarity=0.136 Sum_probs=123.3
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh------cCCCCeEEEcCCCCcChHHhH
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL------ADPGDALLVPTPYYPGFDRDL 161 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l------~~~gd~Vl~~~p~y~~~~~~~ 161 (442)
..-|.++.|...+|.-||.|++.+++ +++++++|++.++-..+|..+++.+ ++.+.+-.++ ..+...+
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 492 (1082)
T PLN02672 419 YFPCEPPAGSKRFRNLIAGFMRIYHH--IPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP----KKWLTSL 492 (1082)
T ss_pred CCCCCCCccchHHHHHHHHHHHHhcC--CcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC----HHHHhHh
Confidence 34577889999999999999999887 7899999999999999998887765 3333222222 1222222
Q ss_pred hhh-------c--CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc
Q 046900 162 RWR-------T--GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK 232 (442)
Q Consensus 162 ~~~-------~--G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~ 232 (442)
... . .+.|+.-|.. .+.+.+.+++. ++++|+..--. +-..+....+.|++.+++.
T Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 556 (1082)
T PLN02672 493 AIENATSDSKSDDVITVIEAPRQ--------SDLVIELIKKL-----KPQVVVTGMAD---FEMRTSTAFEHLLNVTAEI 556 (1082)
T ss_pred hhhcccccCccCCeEEEEeCCCc--------chHHHHHHHhC-----CCeEEEEeccc---hhhhhHHHHHHHHHHHHhh
Confidence 210 1 1233333322 23555555543 66766654322 3344566799999999999
Q ss_pred CcEEEEeccCC-cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH
Q 046900 233 NIHLVSDEIYS-GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR 303 (442)
Q Consensus 233 ~~~vi~De~y~-~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~ 303 (442)
|.+++.|..-. ++. ..+....+.++... ...+.+..++.++-|.-=.+.+-+.+++..++.+.+.+.+
T Consensus 557 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (1082)
T PLN02672 557 GARLFLDISDHLELS-SLPGSNGVLKYLAG--HPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSK 625 (1082)
T ss_pred CcEEEEehhhheeec-cCCCcccHHHHhcC--CCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHH
Confidence 99999999833 221 12233345555442 2234566667788887445899999999877778777654
No 394
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.26 E-value=0.046 Score=50.16 Aligned_cols=118 Identities=12% Similarity=0.103 Sum_probs=84.0
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCC---CeEEEcCCCCcC----hHHhHhhhcCcEE----EEEecCCCCCCcCCHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPG---DALLVPTPYYPG----FDRDLRWRTGIKI----VPIHCDSSNNFQITPQA 186 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~g---d~Vl~~~p~y~~----~~~~~~~~~G~~v----~~v~~~~~~~~~~d~~~ 186 (442)
...++|.+.|+-+.-+..++.+|.+|. -+|+++.-.|+. +...++. .|..+ +.+... ++.-.+..++
T Consensus 126 A~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~l-hG~~~e~sm~~iePR-EGEetlRteD 203 (465)
T KOG3846|consen 126 AQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKL-HGISPENSMIQIEPR-EGEETLRTED 203 (465)
T ss_pred CCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhh-cCCChHHheEEeccc-ccccchhHHH
Confidence 567889999999999999999997765 378888877765 3445664 67643 233222 2334466777
Q ss_pred HHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 187 LEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 187 l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
+.+.|+. .+....+|+++-.+.=||+.++ +.+|-..-...|++|=.|-+++
T Consensus 204 ILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHA 254 (465)
T KOG3846|consen 204 ILDTIEK---NGDEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHA 254 (465)
T ss_pred HHHHHHh---cCCeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhh
Confidence 7777765 3456666777777899999998 6666655556689888888887
No 395
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=95.53 E-value=1.5 Score=44.71 Aligned_cols=87 Identities=18% Similarity=0.237 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPG 409 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~ 409 (442)
+-++++.+++....-.|...|++.|-++.... ||=.+++.-.. ...++..+.+++ +|-++- -+++
T Consensus 391 ~gL~~IArrvh~~T~~l~~~l~~aghel~~k~--fFDTLkI~~~~------s~~~~l~rA~~~-~iNlr~------~ed~ 455 (1001)
T KOG2040|consen 391 HGLKEIARRVHNLTLILAEGLKNAGHELQHKP--FFDTLKIRCGC------SAEEVLDRAAKR-QINLRL------VEDG 455 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhhcccc--ccceEEEEecC------cHHHHHHHHHhh-cCceEE------eecC
Confidence 34677777788888888899988775554322 55433332211 256777777776 665543 2456
Q ss_pred EEEEEee-cCCHHHHHHHHHHHH
Q 046900 410 WFRVCFA-NMSEQTLEVALKRIH 431 (442)
Q Consensus 410 ~iRls~~-~~~~e~i~~~l~~l~ 431 (442)
.+-+++- +.++++++.++..+.
T Consensus 456 tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 456 TIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred ceEEeecccccHHHHHHHHHHHc
Confidence 7888885 336788888877665
No 396
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=94.65 E-value=3.5 Score=37.84 Aligned_cols=335 Identities=13% Similarity=0.119 Sum_probs=167.4
Q ss_pred CCceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 47 PSGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
|..++||+.+.-.+|.+.+.+..++...--.. |.+-. ++.+ .......+.+.-...+.+.++ ++-+-+-+++-
T Consensus 5 ~~~vvnFaaGPAklp~~VL~e~qkdl~n~~g~--GisV~-EmSH--Rsk~f~kii~~tes~lreLln--iPdn~~vlf~Q 77 (370)
T KOG2790|consen 5 PERVVNFAAGPAKLPESVLLEAQKDLLNFNGS--GISVM-EMSH--RSKDFAKIINDTESLLRELLN--IPDNYKVLFLQ 77 (370)
T ss_pred ccceeecCCCcccCCHHHHHHHHHHhhccCCC--cceEE-Eecc--cchhHHHHHHHHHHHHHHHHc--CCCceeEEEEe
Confidence 56778999887778887777766654432111 11100 1111 111223444444444444433 32222234555
Q ss_pred cChHHHHHHHHHhhc--CCC---CeEEEcCCCCcChHHhHhhhcC-cEEEEEecCCCC-CCcCCHHHHHHHHHHHHhcCC
Q 046900 127 AGATAANELLTFILA--DPG---DALLVPTPYYPGFDRDLRWRTG-IKIVPIHCDSSN-NFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~--~~g---d~Vl~~~p~y~~~~~~~~~~~G-~~v~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~ 199 (442)
.|++.-...+...|+ +.| |.|++-.-+--.+.++-+ +| ...+..++.+.. +--+|.+.++. .+
T Consensus 78 GGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk--~~~~~~V~~~~k~y~ygkvPd~~~w~~--------~~ 147 (370)
T KOG2790|consen 78 GGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKK--YGTPNIVIPKLKSYTYGKVPDPSTWEL--------NP 147 (370)
T ss_pred CCCcccccccchhhhccccCCccceEEeccccHHHHHHHHh--hCCceEEeccccccccCcCCChhhccc--------CC
Confidence 567777777766665 445 566665544444555444 34 334444443221 12244555443 22
Q ss_pred ceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCccc
Q 046900 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKD 279 (442)
Q Consensus 200 ~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~ 279 (442)
+.+.+++|.--.-.|+-++.-- +-.-++.++|.|-.-- |-.. +..+..+ -+++.+.-|.
T Consensus 148 da~yvyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSn---flSr-pvDvsk~-----------gvi~aGAQKN 206 (370)
T KOG2790|consen 148 DASYVYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSN---FLSR-PVDVSKF-----------GVIFAGAQKN 206 (370)
T ss_pred CccEEEEecCceeeceecCCCC------CCCCCCceEEEecccc---hhcC-Cccchhc-----------ceEEeccccc
Confidence 4457788755444566554211 1124577778886643 2222 2222222 2567889999
Q ss_pred CCCCCceeEEEeecCHHHHHHHHH-------------ccccCCCcHH----HHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 046900 280 LGLPGFRVGTIYSYNDKVVTTARR-------------MSSFTLISSQ----TQYLLASMLSNKKFTENYIKTNRERLQKR 342 (442)
Q Consensus 280 ~g~~G~RiG~i~~~~~~~~~~~~~-------------~~~~~~~s~~----~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 342 (442)
+|.+|+ -.++..++.+-..... ...+.+.+.. .-.++..+++.++ +..+.+.-.++
T Consensus 207 ~G~aG~--Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GG-----l~a~e~~n~~K 279 (370)
T KOG2790|consen 207 VGPAGV--TVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGG-----LAAMEKLNQEK 279 (370)
T ss_pred cCcccc--EEEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhccc-----HHHHHHHHHHH
Confidence 998885 3344433332221110 0111111111 2223344444444 34444555667
Q ss_pred HHHHHHHHHhC-CCeeec----CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-
Q 046900 343 YQMIIEGLRSA-GIECLK----GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA- 416 (442)
Q Consensus 343 ~~~l~~~L~~~-g~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~- 416 (442)
.+.+.+.+.+. |+-..+ ..+-|.+.+++... +-+.++.++..++ ++.-.-|.. .-|.||-|+.
T Consensus 280 skllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d------~Le~eFLkeA~~~-~mv~LKGhR----SVGGiRASlYN 348 (370)
T KOG2790|consen 280 SKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKD------ELEAEFLKEAAKE-HMVQLKGHR----SVGGIRASLYN 348 (370)
T ss_pred HHHHHHHHHhcCCeEEcccchhhhhhcccceeecch------HHHHHHHHHHHHh-hhhcccccc----ccccchhhhhc
Confidence 78888998765 543222 12233444444321 1245666666666 554444432 2356999986
Q ss_pred cCCHHHHHHHHHHHHHHHHHH
Q 046900 417 NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 417 ~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.++-++.++++.-++++.+.+
T Consensus 349 Aisv~~~q~L~~~m~~F~k~h 369 (370)
T KOG2790|consen 349 AISVEEVQKLAAFMKEFQKKH 369 (370)
T ss_pred cccHHHHHHHHHHHHHHHHhc
Confidence 457888888887777776654
No 397
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=87.66 E-value=15 Score=34.27 Aligned_cols=142 Identities=15% Similarity=0.216 Sum_probs=81.1
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhh--cCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWR--TGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~--~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
++.+-|++|.|++..=..+..-+.+.|-++++.+-.=.+..+..+.. .| ++..+-+|-. +.|++.+..++..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis-----~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDIS-----DREEIYRLAKKVK 109 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCC-----CHHHHHHHHHHHH
Confidence 56667888888877777777888888987766655544444333321 35 4555554432 4566666555544
Q ss_pred hcCCceeEEEEeCCC---CCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEE
Q 046900 196 SKDMRVRGVLITNPS---NPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHI 272 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~---NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~ 272 (442)
++-..+ -|+++|.. .-...-.+.+++++..++=-- + .+.....+.+.+-....+.++.
T Consensus 110 ~e~G~V-~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~-----------~-------~f~t~kaFLP~M~~~~~GHIV~ 170 (300)
T KOG1201|consen 110 KEVGDV-DILVNNAGIVTGKKLLDCSDEEIQKTFDVNTI-----------A-------HFWTTKAFLPKMLENNNGHIVT 170 (300)
T ss_pred HhcCCc-eEEEeccccccCCCccCCCHHHHHHHHHHhhH-----------H-------HHHHHHHHhHHHHhcCCceEEE
Confidence 443344 36777764 223344688888887764321 1 1333444444432234567777
Q ss_pred EecCcccCCCCC
Q 046900 273 VYSLSKDLGLPG 284 (442)
Q Consensus 273 ~~S~SK~~g~~G 284 (442)
+.|.--.+|.+|
T Consensus 171 IaS~aG~~g~~g 182 (300)
T KOG1201|consen 171 IASVAGLFGPAG 182 (300)
T ss_pred ehhhhcccCCcc
Confidence 777666566665
No 398
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=85.44 E-value=9.3 Score=33.92 Aligned_cols=98 Identities=17% Similarity=0.246 Sum_probs=64.3
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeE---EEc---CC-CC-------cChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHH
Q 046900 123 IVVTAGATAANELLTFILADPGDAL---LVP---TP-YY-------PGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALE 188 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~V---l~~---~p-~y-------~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~ 188 (442)
+.+-+|+..+..++..++- .|..| +.. ++ +| ......+. ..|..++....+.+ ..-..++|.
T Consensus 4 ~aL~SGGKDS~~Al~~a~~-~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae-~~gi~l~~~~~~g~--~e~eve~L~ 79 (223)
T COG2102 4 IALYSGGKDSFYALYLALE-EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAE-AMGIPLVTFDTSGE--EEREVEELK 79 (223)
T ss_pred EEEEecCcHHHHHHHHHHH-cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHH-hcCCceEEEecCcc--chhhHHHHH
Confidence 6778898888888777763 44222 111 11 12 11122334 47888888876542 223578888
Q ss_pred HHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE
Q 046900 189 AAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 189 ~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v 236 (442)
++++.. +..+|+ +|.+++..++.++=.+|++.|+-+
T Consensus 80 ~~l~~l-----~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~ 115 (223)
T COG2102 80 EALRRL-----KVDGIV-------AGAIASEYQKERVERLCEELGLKV 115 (223)
T ss_pred HHHHhC-----cccEEE-------EchhhhHHHHHHHHHHHHHhCCEE
Confidence 888753 444555 799999999999999999998754
No 399
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=81.12 E-value=10 Score=34.09 Aligned_cols=97 Identities=21% Similarity=0.265 Sum_probs=54.3
Q ss_pred EEEecC-hHHHHHHHHHhhcCCCCeEE-EcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 123 IVVTAG-ATAANELLTFILADPGDALL-VPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 123 i~~t~G-~~~ai~~~~~~l~~~gd~Vl-~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
|+|+.+ +..+-. ++.+|..++-.|. +..+.-......++ ..|++++..+.+ |.+.|.++++ .
T Consensus 1 I~V~GatG~~G~~-v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~-------~~~~l~~al~-------g 64 (233)
T PF05368_consen 1 ILVTGATGNQGRS-VVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYD-------DPESLVAALK-------G 64 (233)
T ss_dssp EEEETTTSHHHHH-HHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT--------HHHHHHHHT-------T
T ss_pred CEEECCccHHHHH-HHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccC-------CHHHHHHHHc-------C
Confidence 345554 444433 4455555664443 34433122233345 389998866543 6799999887 4
Q ss_pred eeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 201 VRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 201 ~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
...++++.|.+. .-..+.-..+++.|++.|+-.++
T Consensus 65 ~d~v~~~~~~~~---~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 65 VDAVFSVTPPSH---PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp CSEEEEESSCSC---CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred CceEEeecCcch---hhhhhhhhhHHHhhhccccceEE
Confidence 556776655433 22345677889999888765443
No 400
>PRK08265 short chain dehydrogenase; Provisional
Probab=73.93 E-value=53 Score=29.97 Aligned_cols=100 Identities=18% Similarity=0.034 Sum_probs=52.5
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+...|.+.|..|++..-.-......... .+.++..++.|- -|.+.+++.+++..+...
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g 79 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAAS-LGERARFIATDI-----TDDAAIERAVATVVARFG 79 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hCCeeEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 34566666655444455677778888887765433223333332 455566666554 256777777765543333
Q ss_pred ceeEEEEeCCC--CCCCcCCCHHHHHHHH
Q 046900 200 RVRGVLITNPS--NPLGATIQRSVLEELL 226 (442)
Q Consensus 200 ~~~~v~l~~P~--NPtG~~~~~~~l~~l~ 226 (442)
++..++ .|.. .+.+...+.+++++..
T Consensus 80 ~id~lv-~~ag~~~~~~~~~~~~~~~~~~ 107 (261)
T PRK08265 80 RVDILV-NLACTYLDDGLASSRADWLAAL 107 (261)
T ss_pred CCCEEE-ECCCCCCCCcCcCCHHHHHHHH
Confidence 555544 4432 2223334444454443
No 401
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=71.01 E-value=91 Score=29.53 Aligned_cols=62 Identities=16% Similarity=0.173 Sum_probs=42.7
Q ss_pred CCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 179 NFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 179 ~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
+..++.++++..++.....-.+...|++ +-+=|-| ++.+...+|+++|++.+..++.|-.-.
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~Vvl-sGSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVL-SGSLPPG--VPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEE-eCCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 4667877777777655432223334444 3445555 567889999999999999999997744
No 402
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=70.21 E-value=12 Score=35.74 Aligned_cols=57 Identities=21% Similarity=0.378 Sum_probs=39.0
Q ss_pred CCCeEEEcCCCCc-ChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCCc
Q 046900 143 PGDALLVPTPYYP-GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITN-PSNPLGA 215 (442)
Q Consensus 143 ~gd~Vl~~~p~y~-~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~-P~NPtG~ 215 (442)
++.+|++-+-+.- ...+.+.. .|+++..||.+ .+.+++.+. +++.|+|+| |.+|.-.
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~-rg~~vtVVP~~------t~~eeIl~~---------~pDGiflSNGPGDP~~~ 236 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVK-RGCRVTVVPAD------TSAEEILAL---------NPDGIFLSNGPGDPAPL 236 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHH-CCCeEEEEcCC------CCHHHHHhh---------CCCEEEEeCCCCChhHH
Confidence 3456777665543 44555553 79999999865 356766654 788999998 8999533
No 403
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=69.91 E-value=40 Score=28.03 Aligned_cols=134 Identities=19% Similarity=0.310 Sum_probs=73.1
Q ss_pred EEEecChHHHHHHHHHhhcCCCC-eEEEcCCC--CcChH---HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 123 IVVTAGATAANELLTFILADPGD-ALLVPTPY--YPGFD---RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd-~Vl~~~p~--y~~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
++||.|++..=..+.+.|.+.|+ .|++.... -.... ..+. ..+.++..+++|- -+.+.+++.+++..+
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 76 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELK-APGAKITFIECDL-----SDPESIRALIEEVIK 76 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH-HTTSEEEEEESET-----TSHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccc-ccccccccccccc-----ccccccccccccccc
Confidence 55666555444455667777765 44444443 22222 2233 2578888888764 367888888887765
Q ss_pred cCCceeEEEEeCCCCCCCcC--CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEe
Q 046900 197 KDMRVRGVLITNPSNPLGAT--IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVY 274 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~~--~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~ 274 (442)
.......++.+....+.+.. ++.+++++..+.-- ++ ++.-...+.+. ..+.++.++
T Consensus 77 ~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~-----------~~-------~~~~~~~~~~~----~~g~iv~~s 134 (167)
T PF00106_consen 77 RFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNL-----------FG-------PFLLAKALLPQ----GGGKIVNIS 134 (167)
T ss_dssp HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHT-----------HH-------HHHHHHHHHHH----TTEEEEEEE
T ss_pred ccccccccccccccccccccccccchhhhhcccccc-----------ce-------eeeeeehheec----cccceEEec
Confidence 55567766666544443333 34455655555321 00 01111112221 247788888
Q ss_pred cCcccCCCCC
Q 046900 275 SLSKDLGLPG 284 (442)
Q Consensus 275 S~SK~~g~~G 284 (442)
|.+-..+.+|
T Consensus 135 S~~~~~~~~~ 144 (167)
T PF00106_consen 135 SIAGVRGSPG 144 (167)
T ss_dssp EGGGTSSSTT
T ss_pred chhhccCCCC
Confidence 8888777554
No 404
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=68.07 E-value=1.1e+02 Score=28.75 Aligned_cols=107 Identities=17% Similarity=0.168 Sum_probs=64.5
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCCC--eEEEc--CCCCcChHHhHhh-hcCcEEEEEecCCCCCCcCCHHHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPGD--ALLVP--TPYYPGFDRDLRW-RTGIKIVPIHCDSSNNFQITPQALEAAYK 192 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd--~Vl~~--~p~y~~~~~~~~~-~~G~~v~~v~~~~~~~~~~d~~~l~~~l~ 192 (442)
+-..+|++|.|++..+...+....++|. .|+|. -|.+.+...+..+ ..|++..-++ | .++-+.+.
T Consensus 160 ihsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~Ms 229 (353)
T KOG1465|consen 160 IHSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMS 229 (353)
T ss_pred hccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhh
Confidence 3467899999988888877766666653 45554 4555554333222 1677766655 2 33444444
Q ss_pred HHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 193 EAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 193 ~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
+ -.|+|+-+..--+-|.+....-...++..|++|.+++|+=.
T Consensus 230 r------VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlA 271 (353)
T KOG1465|consen 230 R------VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLA 271 (353)
T ss_pred h------cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEec
Confidence 3 23445544444445555555567788888888888876643
No 405
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=67.13 E-value=23 Score=31.49 Aligned_cols=95 Identities=18% Similarity=0.284 Sum_probs=59.0
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCC-cChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPGDALLVPTPYY-PGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
++...|++..|+..|...+ +.|++.|..|.+-.|.. +.+...+.. .+...+. +. .+.+.+.
T Consensus 10 l~~k~VlvvGgG~va~rKa-~~ll~~ga~v~Vvs~~~~~el~~~~~~-~~i~~~~------~~--~~~~~~~-------- 71 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKA-RLLLKAGADVTVVSPEFEPELKALIEE-GKIKWIE------RE--FDAEDLD-------- 71 (210)
T ss_pred cCCCEEEEECCCHHHHHHH-HHHHhcCCEEEEEcCCccHHHHHHHHh-cCcchhh------cc--cChhhhc--------
Confidence 4556799999999999887 67778999999999888 334444442 3322211 11 3334433
Q ss_pred cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE-EEecc
Q 046900 197 KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL-VSDEI 241 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v-i~De~ 241 (442)
...+++.+ .+|+ +.=+++.+.|+++++++ ++|+.
T Consensus 72 ---~~~lviaA-t~d~-------~ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 72 ---DAFLVIAA-TDDE-------ELNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred ---CceEEEEe-CCCH-------HHHHHHHHHHHHhCCceeccCCc
Confidence 22334443 3332 34578899999998776 55655
No 406
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=66.04 E-value=90 Score=27.79 Aligned_cols=83 Identities=12% Similarity=0.077 Sum_probs=44.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+...|.+.|..|.+............. ..+.++..++.|- -|.+.+++.+.+..+...+
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAA-ELGERVKIFPANL-----SDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-HhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 456666655444444567788888877765544333333223 2344444555443 2567777776654433335
Q ss_pred eeEEEEeCC
Q 046900 201 VRGVLITNP 209 (442)
Q Consensus 201 ~~~v~l~~P 209 (442)
..+++.+..
T Consensus 81 id~vi~~ag 89 (245)
T PRK12936 81 VDILVNNAG 89 (245)
T ss_pred CCEEEECCC
Confidence 666665543
No 407
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=65.97 E-value=36 Score=30.15 Aligned_cols=96 Identities=18% Similarity=0.157 Sum_probs=56.4
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
++...|++..|+..|...+ +.|++.|-.|.+-+|....-...+.. .| ++..+.- .| ..+.+.
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~-~~-~i~~~~~----~~--~~~dl~--------- 68 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAE-QG-GITWLAR----CF--DADILE--------- 68 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHH-cC-CEEEEeC----CC--CHHHhC---------
Confidence 4455788888888888777 56667787788777776543332321 33 3333321 12 223322
Q ss_pred CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE-EEecc
Q 046900 198 DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL-VSDEI 241 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v-i~De~ 241 (442)
.. .+++..|++| +.-.++++.|++.++++ +.|+.
T Consensus 69 --~~-~lVi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 69 --GA-FLVIAATDDE-------ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred --Cc-EEEEECCCCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 22 3455556554 22467889999999877 45554
No 408
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=65.61 E-value=64 Score=30.30 Aligned_cols=111 Identities=22% Similarity=0.284 Sum_probs=62.4
Q ss_pred cEEEecChHHHHHHHHHhhcC-CC-C-eEEEcCCCCcChHHhHhhhcC-cEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGATAANELLTFILAD-PG-D-ALLVPTPYYPGFDRDLRWRTG-IKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~-~g-d-~Vl~~~p~y~~~~~~~~~~~G-~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.+++|.|+--.=...++.+++ .. + .+.+.--+|.+-...+....+ -++..+..|- -|.+.+.+.++++
T Consensus 2 ~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI-----~D~~~v~~~~~~~--- 73 (340)
T COG1088 2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDI-----CDRELVDRLFKEY--- 73 (340)
T ss_pred cEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccc-----cCHHHHHHHHHhc---
Confidence 367787743222333344433 23 3 356788899886665442233 2455554332 3678888888764
Q ss_pred CCceeEEE-----------EeCC-----CCCCCcCCCHHHHHHHHHHHHhcC-----cEEEEeccCCcCCCCC
Q 046900 198 DMRVRGVL-----------ITNP-----SNPLGATIQRSVLEELLDFATRKN-----IHLVSDEIYSGSAFSS 249 (442)
Q Consensus 198 ~~~~~~v~-----------l~~P-----~NPtG~~~~~~~l~~l~~~~~~~~-----~~vi~De~y~~~~~~~ 249 (442)
++.+|+ +..| +|-.| -..|++.++++. ++|=.||+|+++..++
T Consensus 74 --~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~G-------T~~LLEaar~~~~~frf~HISTDEVYG~l~~~~ 137 (340)
T COG1088 74 --QPDAVVHFAAESHVDRSIDGPAPFIQTNVVG-------TYTLLEAARKYWGKFRFHHISTDEVYGDLGLDD 137 (340)
T ss_pred --CCCeEEEechhccccccccChhhhhhcchHH-------HHHHHHHHHHhcccceEEEeccccccccccCCC
Confidence 344443 2222 12222 346777888876 3456799999987653
No 409
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=65.48 E-value=28 Score=28.54 Aligned_cols=59 Identities=15% Similarity=0.281 Sum_probs=42.5
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHH-HHHHHHHHHHhc--CcEE-EEeccCCc
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRS-VLEELLDFATRK--NIHL-VSDEIYSG 244 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~-~l~~l~~~~~~~--~~~v-i~De~y~~ 244 (442)
..+.+.|.+.++++ ++..+|+-.|-|..|..-+.. ..+++++..++. ++.| ++||.|..
T Consensus 37 ~~~~~~l~~li~~~-----~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 37 EKDIEELKKLIEEY-----QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCHHHHHHHHHHC-----CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred chHHHHHHHHHHHh-----CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 46789999999985 788999999998888765433 356666554433 6554 78999874
No 410
>PRK04296 thymidine kinase; Provisional
Probab=63.95 E-value=98 Score=26.85 Aligned_cols=123 Identities=15% Similarity=0.175 Sum_probs=68.9
Q ss_pred hHHHHHHHHHhhcCCCCeEEEcCCCCcC---hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 129 ATAANELLTFILADPGDALLVPTPYYPG---FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 129 ~~~ai~~~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
++.++..+.++. ..|..|++..|.+.. ....+. +.|.++..++. ...+++.+.+.+ ...+..+|+
T Consensus 16 TT~~l~~~~~~~-~~g~~v~i~k~~~d~~~~~~~i~~-~lg~~~~~~~~-------~~~~~~~~~~~~---~~~~~dvvi 83 (190)
T PRK04296 16 STELLQRAYNYE-ERGMKVLVFKPAIDDRYGEGKVVS-RIGLSREAIPV-------SSDTDIFELIEE---EGEKIDCVL 83 (190)
T ss_pred HHHHHHHHHHHH-HcCCeEEEEeccccccccCCcEec-CCCCcccceEe-------CChHHHHHHHHh---hCCCCCEEE
Confidence 456666665554 467788877664321 222333 35544332221 123444444433 123456777
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEec
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYS 275 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S 275 (442)
+..- ..++.+++.++++.++..++.||+=.-..+ |.+.++.....+..- -+.++.+.+
T Consensus 84 IDEa-----q~l~~~~v~~l~~~l~~~g~~vi~tgl~~~--~~~~~f~~~~~L~~~-----aD~V~~l~~ 141 (190)
T PRK04296 84 IDEA-----QFLDKEQVVQLAEVLDDLGIPVICYGLDTD--FRGEPFEGSPYLLAL-----ADKVTELKA 141 (190)
T ss_pred EEcc-----ccCCHHHHHHHHHHHHHcCCeEEEEecCcc--cccCcCchHHHHHHh-----cCeEEEeeE
Confidence 7644 446777788899998888988888766665 335555555555443 355665543
No 411
>PRK06500 short chain dehydrogenase; Provisional
Probab=63.82 E-value=86 Score=28.06 Aligned_cols=81 Identities=14% Similarity=0.104 Sum_probs=43.4
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.++...=..+.+.|.+.|..|++..-.-........ ..|.++..+..|. -|.+.+.+.+....+...+
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARA-ELGESALVIRADA-----GDVAAQKALAQALAEAFGR 80 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHH-HhCCceEEEEecC-----CCHHHHHHHHHHHHHHhCC
Confidence 346666665555555667777888777765433222223333 2466666666553 2456665555543333335
Q ss_pred eeEEEEe
Q 046900 201 VRGVLIT 207 (442)
Q Consensus 201 ~~~v~l~ 207 (442)
+..++.+
T Consensus 81 id~vi~~ 87 (249)
T PRK06500 81 LDAVFIN 87 (249)
T ss_pred CCEEEEC
Confidence 5655544
No 412
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=63.69 E-value=69 Score=28.79 Aligned_cols=98 Identities=13% Similarity=0.198 Sum_probs=61.8
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEE----cCC--CCc----C---hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHH
Q 046900 123 IVVTAGATAANELLTFILADPGDALLV----PTP--YYP----G---FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEA 189 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~----~~p--~y~----~---~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~ 189 (442)
++..+|+..+..++..++-+ -+.+.+ +.. .|. + ....+. +.|+.++.++.+.. +.--.+.|.+
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~-algipl~~~~~~~~--~e~~~e~l~~ 79 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAE-SIGIPLIKLYTEGT--EEDEVEELKG 79 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHH-HcCCCeEEeecCCC--ccHHHHHHHH
Confidence 56778888888888887765 554333 111 121 1 122334 48888877664322 1223566666
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE
Q 046900 190 AYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 190 ~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v 236 (442)
++++. ++.+++ +|.+.+..++..+-.+|.+.|+..
T Consensus 80 ~l~~~-----gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~ 114 (223)
T TIGR00290 80 ILHTL-----DVEAVV-------FGAIYSEYQKTRIERVCRELGLKS 114 (223)
T ss_pred HHHHc-----CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEE
Confidence 66653 445555 799999999999999999988743
No 413
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=63.15 E-value=95 Score=28.07 Aligned_cols=82 Identities=15% Similarity=0.122 Sum_probs=46.2
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCc-ChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYP-GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
..++||.|++..=..+...|.+.|..|++....-. .....+. ..|.++..+..|- -|.+.+++.+++..+...
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADL-----IQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCC-----CCHHHHHHHHHHHHHHcC
Confidence 34666666665556667788889988876532211 1112223 2466666666554 356777777765543334
Q ss_pred ceeEEEEeCC
Q 046900 200 RVRGVLITNP 209 (442)
Q Consensus 200 ~~~~v~l~~P 209 (442)
+...++ +|.
T Consensus 83 ~iD~lv-~~a 91 (251)
T PRK12481 83 HIDILI-NNA 91 (251)
T ss_pred CCCEEE-ECC
Confidence 556544 444
No 414
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=62.51 E-value=16 Score=34.50 Aligned_cols=63 Identities=14% Similarity=0.325 Sum_probs=43.8
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
.++++..+.+.++.+|.+..+...+.-.. +.. .++ .+.|..++.+++++|++.|+++|+-||-
T Consensus 28 ~K~N~lhlHl~D~~~~~le~~~~p~l~~~----g~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 28 YKINTFHWHLTDDQAWRIESKKFPELAEK----GGQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred hCCcEEEEeeecCCCceEeeCccchhhhh----ccc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 78899988888777787765554443221 111 112 2445689999999999999999986653
No 415
>PRK06483 dihydromonapterin reductase; Provisional
Probab=62.36 E-value=1.1e+02 Score=27.08 Aligned_cols=77 Identities=17% Similarity=0.175 Sum_probs=41.1
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.+++|.|+...=..+...|.+.|..|++..-.-......+.. .|+..+..++ -|.+.+++.+.+..+...+.
T Consensus 4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~D~-------~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ-AGAQCIQADF-------STNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH-cCCEEEEcCC-------CCHHHHHHHHHHHHhhCCCc
Confidence 366666655444555667777887777654333223333442 4655443332 25677777776554333345
Q ss_pred eEEEE
Q 046900 202 RGVLI 206 (442)
Q Consensus 202 ~~v~l 206 (442)
..++.
T Consensus 76 d~lv~ 80 (236)
T PRK06483 76 RAIIH 80 (236)
T ss_pred cEEEE
Confidence 54443
No 416
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=60.46 E-value=46 Score=28.29 Aligned_cols=87 Identities=16% Similarity=0.227 Sum_probs=48.2
Q ss_pred EEEecC-hHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 123 IVVTAG-ATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 123 i~~t~G-~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
|+|+.+ +.-+-. +++.|++.|-.|....-.-..... ..+++++..++ .|++.+.+++. +.
T Consensus 1 I~V~GatG~vG~~-l~~~L~~~~~~V~~~~R~~~~~~~----~~~~~~~~~d~-------~d~~~~~~al~-------~~ 61 (183)
T PF13460_consen 1 ILVFGATGFVGRA-LAKQLLRRGHEVTALVRSPSKAED----SPGVEIIQGDL-------FDPDSVKAALK-------GA 61 (183)
T ss_dssp EEEETTTSHHHHH-HHHHHHHTTSEEEEEESSGGGHHH----CTTEEEEESCT-------TCHHHHHHHHT-------TS
T ss_pred eEEECCCChHHHH-HHHHHHHCCCEEEEEecCchhccc----ccccccceeee-------hhhhhhhhhhh-------hc
Confidence 445554 444433 446666666656554433222222 25777665543 36788888886 44
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRK 232 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~ 232 (442)
..++.+.+.++. ..+..+.+++.|++.
T Consensus 62 d~vi~~~~~~~~----~~~~~~~~~~a~~~~ 88 (183)
T PF13460_consen 62 DAVIHAAGPPPK----DVDAAKNIIEAAKKA 88 (183)
T ss_dssp SEEEECCHSTTT----HHHHHHHHHHHHHHT
T ss_pred chhhhhhhhhcc----ccccccccccccccc
Confidence 566666543333 255567777777654
No 417
>PRK05872 short chain dehydrogenase; Provisional
Probab=59.52 E-value=1.2e+02 Score=28.39 Aligned_cols=84 Identities=19% Similarity=0.092 Sum_probs=46.6
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhc--CcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRT--GIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~--G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
+...++||.|+...=..+...|.+.|..|++..-.-......... . +.++..+..|- -|.+.+++.+.+..+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~-l~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAE-LGGDDRVLTVVADV-----TDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hcCCCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 345677777655554556677778888887765433322222221 2 34555555543 356777777765543
Q ss_pred cCCceeEEEEeCC
Q 046900 197 KDMRVRGVLITNP 209 (442)
Q Consensus 197 ~~~~~~~v~l~~P 209 (442)
...+...++ +|.
T Consensus 82 ~~g~id~vI-~nA 93 (296)
T PRK05872 82 RFGGIDVVV-ANA 93 (296)
T ss_pred HcCCCCEEE-ECC
Confidence 333555444 444
No 418
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=59.02 E-value=1.1e+02 Score=30.58 Aligned_cols=132 Identities=16% Similarity=0.174 Sum_probs=79.3
Q ss_pred cchHHHHHHHHHHHHHHhCCC---------CccCCCcEEEecChHHHHHHHHHhhcCCC---CeEEE-cCCCCcChH--H
Q 046900 95 HGLKSFRQAMASFMEQIRGGR---------AKFDLNRIVVTAGATAANELLTFILADPG---DALLV-PTPYYPGFD--R 159 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~---------~~~~~~~i~~t~G~~~ai~~~~~~l~~~g---d~Vl~-~~p~y~~~~--~ 159 (442)
.+-.+|.+.|-+|+....... ..+...++++|-|++..+..++.--.+.| ..|++ ..|.+-+-. .
T Consensus 325 eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~lr 404 (556)
T KOG1467|consen 325 EAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLLR 404 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHHH
Confidence 344566666666666543210 12456789999998888887765443333 23444 356665532 2
Q ss_pred hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE-
Q 046900 160 DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS- 238 (442)
Q Consensus 160 ~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~- 238 (442)
.+. ..|.++.++-++. +.-.+.+ -+++++-++-----|.+|++.--..++-.++.+|++||+
T Consensus 405 ~Lv-~~GinctYv~I~a----------~syim~e------vtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVC 467 (556)
T KOG1467|consen 405 RLV-DRGINCTYVLINA----------ASYIMLE------VTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVC 467 (556)
T ss_pred HHH-HcCCCeEEEEehh----------HHHHHHh------cceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEE
Confidence 333 2788887776542 2222222 445444444434559999988888888899999998754
Q ss_pred eccCC
Q 046900 239 DEIYS 243 (442)
Q Consensus 239 De~y~ 243 (442)
=|+|-
T Consensus 468 CE~yK 472 (556)
T KOG1467|consen 468 CEAYK 472 (556)
T ss_pred echhh
Confidence 45554
No 419
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=58.63 E-value=15 Score=35.15 Aligned_cols=64 Identities=11% Similarity=0.235 Sum_probs=43.7
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
.++++..+.+.++.+|.+..+...+.-.. +.. .....+.|..+|.+++++|++.|+++|+-||-
T Consensus 30 ~KlN~lhlHLtD~~~~rle~~~~P~lt~~----ga~------~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 30 YKLNVLHLHLTDDQGWRIEIKSWPKLTEI----GGS------TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred hCCcEEEEEeecCCcceeeecCccccccc----ccc------cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 78888888887777787765544332110 100 11234567789999999999999999986653
No 420
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=58.56 E-value=1.3e+02 Score=26.88 Aligned_cols=85 Identities=16% Similarity=0.085 Sum_probs=45.6
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhh-cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWR-TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
...++||.|+...=..+...|.+.|..|++..-.-.......... .+.++..+..|- .|.+.+.+.+.+.....
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV-----SDEADVEAAVAAALERF 79 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 345777766544444456677778877766543332222222210 134555555543 46778887776553333
Q ss_pred CceeEEEEeCC
Q 046900 199 MRVRGVLITNP 209 (442)
Q Consensus 199 ~~~~~v~l~~P 209 (442)
.+..+|+.+..
T Consensus 80 ~~~d~vi~~ag 90 (251)
T PRK07231 80 GSVDILVNNAG 90 (251)
T ss_pred CCCCEEEECCC
Confidence 45666665543
No 421
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=58.13 E-value=61 Score=27.65 Aligned_cols=78 Identities=23% Similarity=0.243 Sum_probs=49.2
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEE-EcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 123 IVVTAGATAANELLTFILADPGDALL-VPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl-~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
-++|.|++..=.....-|.+.|..|+ ..-|.-.+ ...++. .|-+++..|.+-. ..+++..++...+.+-.+.
T Consensus 12 alvtggasglg~ataerlakqgasv~lldlp~skg-~~vake-lg~~~vf~padvt-----sekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 12 ALVTGGASGLGKATAERLAKQGASVALLDLPQSKG-ADVAKE-LGGKVVFTPADVT-----SEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred EEeecCcccccHHHHHHHHhcCceEEEEeCCcccc-hHHHHH-hCCceEEeccccC-----cHHHHHHHHHHHHhhccce
Confidence 45666666555556677878886555 55555554 455664 8999999997642 3466777777665444555
Q ss_pred eEEEEe
Q 046900 202 RGVLIT 207 (442)
Q Consensus 202 ~~v~l~ 207 (442)
.+.+=|
T Consensus 85 d~~vnc 90 (260)
T KOG1199|consen 85 DALVNC 90 (260)
T ss_pred eeeeec
Confidence 554433
No 422
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=57.09 E-value=1.5e+02 Score=26.67 Aligned_cols=98 Identities=12% Similarity=0.095 Sum_probs=58.4
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEE--cCCC------Cc-----ChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHH
Q 046900 123 IVVTAGATAANELLTFILADPGDALLV--PTPY------YP-----GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEA 189 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~--~~p~------y~-----~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~ 189 (442)
++..+|+-....++..++-+ .+.+.+ ..|. |. .....+. +.|+.++.+....+ +.-..+++.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~-algiPl~~~~~~~~--~e~~~~~l~~ 79 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAE-AVGIPLIKLYTSGE--EEKEVEDLAG 79 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHH-HcCCCeEEEEcCCc--hhHHHHHHHH
Confidence 45667877777777766654 553332 1221 11 1223344 48888777765431 1112344444
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE
Q 046900 190 AYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 190 ~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v 236 (442)
.+++ . ++.+++ +|.+.+..++..+-.+|.+.|+-.
T Consensus 80 ~l~~---~--gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~ 114 (222)
T TIGR00289 80 QLGE---L--DVEALC-------IGAIESNYQKSRIDKVCRELGLKS 114 (222)
T ss_pred HHHH---c--CCCEEE-------ECccccHHHHHHHHHHHHHcCCEE
Confidence 4433 1 455555 799999999999999999988743
No 423
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=56.92 E-value=1.8e+02 Score=27.62 Aligned_cols=128 Identities=16% Similarity=0.181 Sum_probs=72.3
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEc---CCCCcChHHhHhhhcC
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVP---TPYYPGFDRDLRWRTG 166 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~---~p~y~~~~~~~~~~~G 166 (442)
.|...+|.......+++-+. -+..+++++-++..+-.++ ....+ -.|++. +|-=......+.. -|
T Consensus 66 ~~~na~~~~~~a~~iarql~--------~~~~dviv~i~tp~Aq~~~-s~~~~--iPVV~aavtd~v~a~Lv~~~~~-pg 133 (322)
T COG2984 66 DYQNAQGDLGTAAQIARQLV--------GDKPDVIVAIATPAAQALV-SATKT--IPVVFAAVTDPVGAKLVKSLEQ-PG 133 (322)
T ss_pred EeecCCCChHHHHHHHHHhh--------cCCCcEEEecCCHHHHHHH-HhcCC--CCEEEEccCchhhccCCccccC-CC
Confidence 45566787788888888776 2455677777766554433 33322 234433 2332223333332 45
Q ss_pred cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE-EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccC
Q 046900 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV-LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242 (442)
Q Consensus 167 ~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v-~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y 242 (442)
.++..+. | ..+.++-.+.++.- -++.+-| ++.||+-+ .|...++++.+.+++.|+-|++=-+-
T Consensus 134 ~NvTGvs-D-----~~~v~q~i~lik~~---~Pnak~Igv~Y~p~E~----ns~~l~eelk~~A~~~Gl~vve~~v~ 197 (322)
T COG2984 134 GNVTGVS-D-----LLPVAQQIELIKAL---LPNAKSIGVLYNPGEA----NSVSLVEELKKEARKAGLEVVEAAVT 197 (322)
T ss_pred CceeecC-C-----cchHHHHHHHHHHh---CCCCeeEEEEeCCCCc----ccHHHHHHHHHHHHHCCCEEEEEecC
Confidence 6666653 1 12344444444332 2355555 77787643 34567889999999999988875553
No 424
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=56.49 E-value=47 Score=27.42 Aligned_cols=57 Identities=26% Similarity=0.212 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHH-HHHHHHHHHH-hcCcE-EEEeccCC
Q 046900 182 ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRS-VLEELLDFAT-RKNIH-LVSDEIYS 243 (442)
Q Consensus 182 ~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~-~l~~l~~~~~-~~~~~-vi~De~y~ 243 (442)
.+.+.|.+.++++ ++..|++-.|.|+.|...+.. ..+++++..+ +.++. ++.||-..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERlt 99 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLS 99 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccC
Confidence 4889999999986 777899999999999888754 3666666554 34544 46676654
No 425
>PRK07063 short chain dehydrogenase; Provisional
Probab=56.10 E-value=1.6e+02 Score=26.66 Aligned_cols=83 Identities=17% Similarity=0.136 Sum_probs=44.1
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--h--cCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--R--TGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~--~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
...++||.|+...=..+...|.+.|..|++..-.-......... . .+.++..+..|- -|.+.+++.+.+..
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~ 81 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADV-----TDAASVAAAVAAAE 81 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccC-----CCHHHHHHHHHHHH
Confidence 44577776655544556677888888777654332222222221 0 244555666553 24566666666543
Q ss_pred hcCCceeEEEEe
Q 046900 196 SKDMRVRGVLIT 207 (442)
Q Consensus 196 ~~~~~~~~v~l~ 207 (442)
+...+...++.+
T Consensus 82 ~~~g~id~li~~ 93 (260)
T PRK07063 82 EAFGPLDVLVNN 93 (260)
T ss_pred HHhCCCcEEEEC
Confidence 333355554443
No 426
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=56.09 E-value=1.5e+02 Score=26.64 Aligned_cols=81 Identities=9% Similarity=0.025 Sum_probs=46.3
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|.+|++....-......... .+.++..+..|- -|.+.+++.+.+..+...+
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALE-IGPAAIAVSLDV-----TRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH-hCCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 3467776655544556677778898887765544333333332 344455555543 3567777777655433345
Q ss_pred eeEEEEe
Q 046900 201 VRGVLIT 207 (442)
Q Consensus 201 ~~~v~l~ 207 (442)
+..++.+
T Consensus 81 id~li~~ 87 (257)
T PRK07067 81 IDILFNN 87 (257)
T ss_pred CCEEEEC
Confidence 6655554
No 427
>PRK08862 short chain dehydrogenase; Provisional
Probab=55.78 E-value=1.1e+02 Score=27.20 Aligned_cols=82 Identities=10% Similarity=0.121 Sum_probs=46.6
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..+++|.|+...=..+...|.++|..|++..-.-...... +.. .|.++..+.+|. -|.+.+++.+.+..+.
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSA-LTDNVYSFQLKD-----FSQESIRHLFDAIEQQ 79 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-cCCCeEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 3566666655444556677888998888764433322222 222 366666666654 3567777777655433
Q ss_pred CC-ceeEEEEeCC
Q 046900 198 DM-RVRGVLITNP 209 (442)
Q Consensus 198 ~~-~~~~v~l~~P 209 (442)
-. +... +++|.
T Consensus 80 ~g~~iD~-li~na 91 (227)
T PRK08862 80 FNRAPDV-LVNNW 91 (227)
T ss_pred hCCCCCE-EEECC
Confidence 22 4554 44444
No 428
>PRK06182 short chain dehydrogenase; Validated
Probab=55.44 E-value=1.5e+02 Score=27.16 Aligned_cols=77 Identities=13% Similarity=0.164 Sum_probs=40.0
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-..... +. ..++.++..++. |.+.+++.+++..+...++
T Consensus 5 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-~~-~~~~~~~~~Dv~-------~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 5 VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED-LA-SLGVHPLSLDVT-------DEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH-hCCCeEEEeeCC-------CHHHHHHHHHHHHHhcCCC
Confidence 46666654433344556677788877765433222211 22 135555444432 5677777776554433455
Q ss_pred eEEEEe
Q 046900 202 RGVLIT 207 (442)
Q Consensus 202 ~~v~l~ 207 (442)
..++.+
T Consensus 76 d~li~~ 81 (273)
T PRK06182 76 DVLVNN 81 (273)
T ss_pred CEEEEC
Confidence 655444
No 429
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=55.24 E-value=19 Score=34.80 Aligned_cols=59 Identities=12% Similarity=0.294 Sum_probs=42.4
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
..+++..+.+.++.+|.+..+.+.+.-.. | ....|..|+.+++++|++.|+++|+-||-
T Consensus 30 ~KlN~lh~HltDd~~~rle~~~~P~Lt~~----g-----------a~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 30 NKLNVLHWHITDSQSFPLESPSYPELSKK----G-----------AYSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred hCCcEEEEeEEcCCCceEeeCCCchhhhc----c-----------CcCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 78888888887777788766555443211 1 12346789999999999999999986653
No 430
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=54.47 E-value=29 Score=27.90 Aligned_cols=60 Identities=20% Similarity=0.438 Sum_probs=43.9
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE--eCC---CCCCCcCCCHHHHHHHHHHHHhcCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI--TNP---SNPLGATIQRSVLEELLDFATRKNI 234 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l--~~P---~NPtG~~~~~~~l~~l~~~~~~~~~ 234 (442)
.+++++.+|... .+|+..+.+++.+ ..+.|++ |.| ++..|......+++.+-++..+.|+
T Consensus 27 ~~vriIrvpC~G----rv~~~~il~Af~~------GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 27 PNVRIIRVPCSG----RVDPEFILRAFEK------GADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred CCeEEEEccCCC----ccCHHHHHHHHHc------CCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 346778888754 4899999999986 4455555 444 5689998888888888887776653
No 431
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=54.44 E-value=51 Score=30.98 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=25.5
Q ss_pred ceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 200 ~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
.+|.+++.+-.. +.++-++|.++|+++++.|+==.+.+
T Consensus 89 gvk~avI~s~Gf------~~~~~~~l~~~a~~~girvlGPNc~G 126 (291)
T PRK05678 89 GIDLIVCITEGI------PVLDMLEVKAYLERKKTRLIGPNCPG 126 (291)
T ss_pred CCCEEEEECCCC------CHHHHHHHHHHHHHcCCEEECCCCCc
Confidence 566665554332 34545689999999999888666654
No 432
>PRK05867 short chain dehydrogenase; Provisional
Probab=53.99 E-value=1.7e+02 Score=26.36 Aligned_cols=83 Identities=13% Similarity=0.235 Sum_probs=44.4
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
...++||.|++..=..+...|.+.|..|++..-.-......... ..|.++..+..|- -|.+.+++.+.+..+.
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDV-----SQHQQVTSMLDQVTAE 83 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 34566666655444455677778888887654332222222111 1355666666553 3567777777654433
Q ss_pred CCceeEEEEe
Q 046900 198 DMRVRGVLIT 207 (442)
Q Consensus 198 ~~~~~~v~l~ 207 (442)
..++..++.+
T Consensus 84 ~g~id~lv~~ 93 (253)
T PRK05867 84 LGGIDIAVCN 93 (253)
T ss_pred hCCCCEEEEC
Confidence 3355655443
No 433
>PRK06194 hypothetical protein; Provisional
Probab=53.93 E-value=1.8e+02 Score=26.73 Aligned_cols=82 Identities=18% Similarity=0.139 Sum_probs=43.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
..++||.|+...=..+...|.+.|..|++..-.-......... ..|.++..+..|- -|.+.+++.+....+..
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDV-----SDAAQVEALADAALERF 81 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 4567776654443445567777888777654332222222211 1356666666553 25677777776544333
Q ss_pred CceeEEEEe
Q 046900 199 MRVRGVLIT 207 (442)
Q Consensus 199 ~~~~~v~l~ 207 (442)
.++..|+.+
T Consensus 82 g~id~vi~~ 90 (287)
T PRK06194 82 GAVHLLFNN 90 (287)
T ss_pred CCCCEEEEC
Confidence 345554443
No 434
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=53.38 E-value=2.2e+02 Score=27.49 Aligned_cols=109 Identities=12% Similarity=0.200 Sum_probs=62.1
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeE--EEcCCCCcC------hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDAL--LVPTPYYPG------FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAY 191 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~V--l~~~p~y~~------~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l 191 (442)
.|-|+..+|+-.+..++..+.-.-|..+ +.-++.|.. ....+. ..|+....+. +|++.+.+..
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~-~lgvd~~~i~--------~d~~~~~~l~ 130 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIK-KLGFDLHTIT--------INPETFRKLQ 130 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHH-HcCCCeEEEe--------CCHHHHHHHH
Confidence 5668888888777766533221224333 344566542 223344 3788777665 3556665554
Q ss_pred HHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 192 KEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 192 ~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
... .+ +..+|...+. ......+.++|.++|+.+|+.....+-.|+|
T Consensus 131 ~~~------~~-----~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~~dE~fgG 176 (343)
T TIGR03573 131 RAY------FK-----KVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGENIAEEYGG 176 (343)
T ss_pred HHH------Hh-----ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCCHHHhcCC
Confidence 431 11 2334433322 2335677889999999999988776655544
No 435
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=52.41 E-value=1.9e+02 Score=26.48 Aligned_cols=83 Identities=13% Similarity=0.077 Sum_probs=44.2
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
...++||.|+...=..+...|.+.|..|++....-......... ..|.++..+..|- .|.+.+.+.+.+..+.
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADV-----LDKESLEQARQQILED 84 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 34566666654444566677778888777755432222221111 1355666666553 2566677666654333
Q ss_pred CCceeEEEEe
Q 046900 198 DMRVRGVLIT 207 (442)
Q Consensus 198 ~~~~~~v~l~ 207 (442)
-.+...++.+
T Consensus 85 ~g~id~li~~ 94 (278)
T PRK08277 85 FGPCDILING 94 (278)
T ss_pred cCCCCEEEEC
Confidence 3355555443
No 436
>PRK05717 oxidoreductase; Validated
Probab=52.25 E-value=1.6e+02 Score=26.51 Aligned_cols=81 Identities=14% Similarity=0.014 Sum_probs=42.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+++.|.+.|..|++....-......... .+.++..+..|- -|.+.+.+.+.+..+.-.+
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKA-LGENAWFIAMDV-----ADEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH-cCCceEEEEccC-----CCHHHHHHHHHHHHHHhCC
Confidence 4466666654444455677777887777764333222333332 344555555543 2566776666554333234
Q ss_pred eeEEEEe
Q 046900 201 VRGVLIT 207 (442)
Q Consensus 201 ~~~v~l~ 207 (442)
+..++.+
T Consensus 85 id~li~~ 91 (255)
T PRK05717 85 LDALVCN 91 (255)
T ss_pred CCEEEEC
Confidence 5555544
No 437
>PRK08589 short chain dehydrogenase; Validated
Probab=52.07 E-value=1.9e+02 Score=26.45 Aligned_cols=82 Identities=21% Similarity=0.173 Sum_probs=44.5
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
..++||.|+...=..+...|.+.|..|++.... ......+.. ..+.++..+..|- -|.+.+++.+.+..+..
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDI-----SDEQQVKDFASEIKEQF 80 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeec-----CCHHHHHHHHHHHHHHc
Confidence 346666665544445567778889888876544 333222221 1355566666553 24667777666554333
Q ss_pred CceeEEEEeCC
Q 046900 199 MRVRGVLITNP 209 (442)
Q Consensus 199 ~~~~~v~l~~P 209 (442)
.+... +++|.
T Consensus 81 g~id~-li~~A 90 (272)
T PRK08589 81 GRVDV-LFNNA 90 (272)
T ss_pred CCcCE-EEECC
Confidence 34554 44444
No 438
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=51.70 E-value=2.1e+02 Score=26.72 Aligned_cols=116 Identities=14% Similarity=0.152 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCC--eEEEc--CCCCcChHHh--HhhhcCcEEEEE
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGD--ALLVP--TPYYPGFDRD--LRWRTGIKIVPI 172 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd--~Vl~~--~p~y~~~~~~--~~~~~G~~v~~v 172 (442)
+..+.++++-..+ +...++++|.|.+.....++....+.|. +|++. .|.+.+...+ +. ..|+.+..+
T Consensus 94 ~~~~~I~~~a~~~------I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~eL~-~~GI~vtlI 166 (275)
T PRK08335 94 EAKREIGNIGSEL------IDDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLALANELE-FLGIEFEVI 166 (275)
T ss_pred HHHHHHHHHHHHH------cCCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHHHHHHH-HCCCCEEEE
Confidence 4445555554433 3456678888866555555555544553 55554 3655543322 22 268877766
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT-NPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~-~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
+-. .+...+. ++..+++- .---..|.++.+----.++-.|+.|++++++
T Consensus 167 ~Ds----------a~~~~m~-------~vd~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 167 TDA----------QLGLFAK-------EATLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred ecc----------HHHHHHH-------hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 511 1222232 33444442 2223345555544455777888899988765
No 439
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=51.65 E-value=1.7e+02 Score=26.13 Aligned_cols=86 Identities=20% Similarity=0.150 Sum_probs=45.8
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH---HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFD---RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
++||.|+...=..+.+.|.+.|-.|++..-.-.... ..+. ..|.++..+..|- -|.+.+.+.+....+...
T Consensus 3 ~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dl-----~~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 3 ALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEIN-QAGGKAVAYKLDV-----SDKDQVFSAIDQAAEKFG 76 (254)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCeEEEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 556665544444556667778877765533211111 1222 2455666666553 256777777765544334
Q ss_pred ceeEEEEeCCCCCCC
Q 046900 200 RVRGVLITNPSNPLG 214 (442)
Q Consensus 200 ~~~~v~l~~P~NPtG 214 (442)
++..++.+....+.+
T Consensus 77 ~id~vi~~ag~~~~~ 91 (254)
T TIGR02415 77 GFDVMVNNAGVAPIT 91 (254)
T ss_pred CCCEEEECCCcCCCC
Confidence 566666654444444
No 440
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=51.20 E-value=43 Score=30.65 Aligned_cols=94 Identities=19% Similarity=0.331 Sum_probs=56.2
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCC-CcChHHhHhhhcCcEEEEEecCCCCCCcC-CHHHHHHHHHHHHhcCC
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPY-YPGFDRDLRWRTGIKIVPIHCDSSNNFQI-TPQALEAAYKEAESKDM 199 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~-y~~~~~~~~~~~G~~v~~v~~~~~~~~~~-d~~~l~~~l~~~~~~~~ 199 (442)
+|++..|++++-.++ ..|.+.|. |+++.-+ |..-.. .....+.++ -. ++ + |.+.+++.|++.
T Consensus 2 ~ILvlgGTtE~r~la-~~L~~~g~-v~~sv~t~~g~~~~-~~~~~~~~v---~~---G~--lg~~~~l~~~l~~~----- 65 (249)
T PF02571_consen 2 KILVLGGTTEGRKLA-ERLAEAGY-VIVSVATSYGGELL-KPELPGLEV---RV---GR--LGDEEGLAEFLREN----- 65 (249)
T ss_pred EEEEEechHHHHHHH-HHHHhcCC-EEEEEEhhhhHhhh-ccccCCceE---EE---CC--CCCHHHHHHHHHhC-----
Confidence 589999999998776 56667777 5554422 222111 010012222 21 22 5 889999999863
Q ss_pred ceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEE
Q 046900 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLV 237 (442)
Q Consensus 200 ~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi 237 (442)
+++ ++.+-+.|--..+| +.+.+.|++.|+..+
T Consensus 66 ~i~--~vIDATHPfA~~is----~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 66 GID--AVIDATHPFAAEIS----QNAIEACRELGIPYL 97 (249)
T ss_pred CCc--EEEECCCchHHHHH----HHHHHHHhhcCcceE
Confidence 444 44456677655444 667788888887654
No 441
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=50.30 E-value=23 Score=33.71 Aligned_cols=56 Identities=14% Similarity=0.304 Sum_probs=38.0
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEE
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLV 237 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi 237 (442)
.++++....+.++.+|.+..+.+.+.-. .. ..|..++.+++++|++.|+++|+-||
T Consensus 30 ~KlN~lh~HltDd~~~rle~~~~P~lt~----------------~g-~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 30 VKLNVFHWHLTDDQGFRIESKKYPKLQQ----------------KA-SDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred hCCeEEEEEEecCCCceeecCCCccccc----------------cC-CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 6778888887666667665443322100 00 13567999999999999999998654
No 442
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=49.84 E-value=2.3e+02 Score=26.84 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=60.4
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCC--CeEEEc--CCCCcChH--HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPG--DALLVP--TPYYPGFD--RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAY 191 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~g--d~Vl~~--~p~y~~~~--~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l 191 (442)
+...++++|-|.+.....++....+.| -+|++. .|...+.. ..+. ..|+++..++- ..+-..+
T Consensus 118 i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~-~~GI~vtlI~D----------sav~~~m 186 (310)
T PRK08535 118 IRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGHITAKELA-EYGIPVTLIVD----------SAVRYFM 186 (310)
T ss_pred cCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHHHHHHHHH-HCCCCEEEEeh----------hHHHHHH
Confidence 345668888886666665555554444 345543 34444422 2233 26888777752 2333334
Q ss_pred HHHHhcCCceeEEEEe-CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 192 KEAESKDMRVRGVLIT-NPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 192 ~~~~~~~~~~~~v~l~-~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
. ++..+++. .---+.|.++++----.++-.|+.+++++++
T Consensus 187 ~-------~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 187 K-------DVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred H-------hCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 3 34455553 3335667777766677888889999988765
No 443
>PRK06139 short chain dehydrogenase; Provisional
Probab=49.44 E-value=1.8e+02 Score=27.72 Aligned_cols=82 Identities=15% Similarity=0.169 Sum_probs=44.2
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH---HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD---RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.+++..=..+...|.+.|..|++..-.-.... ..++ ..|.++..++.|- -|.+.+++.+.+..+
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~-~~g~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 80 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECR-ALGAEVLVVPTDV-----TDADQVKALATQAAS 80 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-hcCCcEEEEEeeC-----CCHHHHHHHHHHHHH
Confidence 334566655444334455677788888776543222222 2233 2566766666553 256777777765544
Q ss_pred cCCceeEEEEe
Q 046900 197 KDMRVRGVLIT 207 (442)
Q Consensus 197 ~~~~~~~v~l~ 207 (442)
...++..+|.+
T Consensus 81 ~~g~iD~lVnn 91 (330)
T PRK06139 81 FGGRIDVWVNN 91 (330)
T ss_pred hcCCCCEEEEC
Confidence 33355554433
No 444
>smart00642 Aamy Alpha-amylase domain.
Probab=49.31 E-value=78 Score=26.90 Aligned_cols=27 Identities=22% Similarity=0.338 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 218 QRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 218 ~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
+.++++++++.|+++|+-||.|=+...
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 568999999999999999999998764
No 445
>PRK05876 short chain dehydrogenase; Provisional
Probab=49.27 E-value=2.1e+02 Score=26.24 Aligned_cols=83 Identities=18% Similarity=0.214 Sum_probs=45.6
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
..++||.|++..=..+...|...|..|++..-.-......... ..|.++..+..|- -|.+.+++.+.+..+..
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDV-----RHREEVTHLADEAFRLL 81 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCC-----CCHHHHHHHHHHHHHHc
Confidence 3577776655544556677778888777654322222222211 1466666666553 25677777776654433
Q ss_pred CceeEEEEeCC
Q 046900 199 MRVRGVLITNP 209 (442)
Q Consensus 199 ~~~~~v~l~~P 209 (442)
.++.+ +++|.
T Consensus 82 g~id~-li~nA 91 (275)
T PRK05876 82 GHVDV-VFSNA 91 (275)
T ss_pred CCCCE-EEECC
Confidence 44554 44444
No 446
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=48.91 E-value=80 Score=28.26 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=52.7
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEc--C---C----CC----cChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHH
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVP--T---P----YY----PGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEA 189 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~--~---p----~y----~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~ 189 (442)
++.-+|+..+..++.+++.+ .+.+.+- . . .| ......+. +.|+.++.++++... .--.+++.+
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~-algipl~~~~~~g~~--~~~~~~l~~ 79 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAE-ALGIPLIEIPTSGDE--EDYVEDLKE 79 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHH-HHT--EEEEEE---C--CCHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHH-HCCCCEEEEEccCcc--chhhHHHHH
Confidence 56678888888887777755 4432221 1 1 11 11233445 489999988876321 112566766
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEE
Q 046900 190 AYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLV 237 (442)
Q Consensus 190 ~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi 237 (442)
.+++. ++.+++ +|.+.+...+..+-++|.+.|+-.+
T Consensus 80 ~l~~~-----~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 80 ALKEL-----KVEAVV-------FGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HHCTC-------SEEE---------TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHHc-----CCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 66542 455555 7999999988888889999887543
No 447
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=48.71 E-value=67 Score=30.09 Aligned_cols=76 Identities=5% Similarity=0.094 Sum_probs=41.4
Q ss_pred cCCCCcChHHhHhhh-cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHH
Q 046900 150 PTPYYPGFDRDLRWR-TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDF 228 (442)
Q Consensus 150 ~~p~y~~~~~~~~~~-~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~ 228 (442)
--|+|+...+.-..- -.+-++.+|.+ .-++.++++.+. .+|.+++..... +...-++|.++
T Consensus 48 G~~~y~sv~dlp~~~~~Dlavi~vpa~------~v~~~l~e~~~~------Gvk~avIis~Gf------~e~~~~~l~~~ 109 (286)
T TIGR01019 48 GLPVFDSVKEAVEETGANASVIFVPAP------FAADAIFEAIDA------GIELIVCITEGI------PVHDMLKVKRY 109 (286)
T ss_pred CeeccCCHHHHhhccCCCEEEEecCHH------HHHHHHHHHHHC------CCCEEEEECCCC------CHHHHHHHHHH
Confidence 445566665544310 13334444421 124455554443 566666554332 33345789999
Q ss_pred HHhcCcEEEEeccCC
Q 046900 229 ATRKNIHLVSDEIYS 243 (442)
Q Consensus 229 ~~~~~~~vi~De~y~ 243 (442)
|+++++.|+==.+.+
T Consensus 110 a~~~girilGPNc~G 124 (286)
T TIGR01019 110 MEESGTRLIGPNCPG 124 (286)
T ss_pred HHHcCCEEECCCCce
Confidence 999999888666655
No 448
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=48.64 E-value=2.4e+02 Score=26.61 Aligned_cols=108 Identities=22% Similarity=0.214 Sum_probs=65.1
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCCC--eEEEc--CCCCcChHH--hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPGD--ALLVP--TPYYPGFDR--DLRWRTGIKIVPIHCDSSNNFQITPQALEAAY 191 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd--~Vl~~--~p~y~~~~~--~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l 191 (442)
+...++++|.|.+.+...++....+.|. +|++. .|.+.+... .++. .|.++..+. | ......+
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~-~gI~~~~I~---------D-sa~~~~~ 185 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQ-SGIPVTVIV---------D-SAVGAFM 185 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHH-cCCceEEEe---------c-hHHHHHH
Confidence 4567899999988888877777767764 45543 566665433 3443 787777765 1 2333344
Q ss_pred HHHHhcCCceeEEEEe-CCCCCCCcCCCHHHHHHHHHHHHhcCcEEE-EeccCC
Q 046900 192 KEAESKDMRVRGVLIT-NPSNPLGATIQRSVLEELLDFATRKNIHLV-SDEIYS 243 (442)
Q Consensus 192 ~~~~~~~~~~~~v~l~-~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi-~De~y~ 243 (442)
+ ++..+++- .----.|.++++----.|+..|++.+.+++ +=|.|-
T Consensus 186 ~-------~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~aesyK 232 (301)
T COG1184 186 S-------RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVAESYK 232 (301)
T ss_pred H-------hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEeeeec
Confidence 3 33444443 222234556665556678888888887764 445543
No 449
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=48.45 E-value=2.2e+02 Score=26.14 Aligned_cols=100 Identities=16% Similarity=0.159 Sum_probs=59.7
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcC--CCCcChHHh--HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPT--PYYPGFDRD--LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~--p~y~~~~~~--~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
.+++++|-|.+..+..++... +++.+|++.+ |.+.+...+ +. ..|+++..++ | ..+...+.
T Consensus 86 ~~dvILT~s~S~~v~~~l~~~-~~~~~V~v~ESrP~~eG~~~a~~L~-~~GI~vtli~---------D-sa~~~~m~--- 150 (253)
T PRK06372 86 NDSVIGTISSSQVLKAFISSS-EKIKSVYILESRPMLEGIDMAKLLV-KSGIDVVLLT---------D-ASMCEAVL--- 150 (253)
T ss_pred CCCEEEEeCCcHHHHHHHHhc-CCCCEEEEecCCCchHHHHHHHHHH-HCCCCEEEEe---------h-hHHHHHHH---
Confidence 346999999887877766442 3445666653 555443222 22 2688776664 1 12233333
Q ss_pred hcCCceeEEEEe-CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 196 SKDMRVRGVLIT-NPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 196 ~~~~~~~~v~l~-~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
++..+++. .---..|.++++----.++-.|+.+++++++
T Consensus 151 ----~vd~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 151 ----NVDAVIVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred ----hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 34455553 2224567777766667888889999998876
No 450
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=48.32 E-value=2.1e+02 Score=25.78 Aligned_cols=79 Identities=16% Similarity=0.183 Sum_probs=40.3
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-..-...+.. .++. .++.|- -|.+.+++.+.+..+...+
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~-~~~~--~~~~Dl-----~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE-KGVF--TIKCDV-----GNRDQVKKSKEVVEKEFGR 79 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh-CCCe--EEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 3466666654444455677778887776542111111222221 3443 344432 2567777777655433345
Q ss_pred eeEEEEe
Q 046900 201 VRGVLIT 207 (442)
Q Consensus 201 ~~~v~l~ 207 (442)
...++.+
T Consensus 80 id~li~~ 86 (255)
T PRK06463 80 VDVLVNN 86 (255)
T ss_pred CCEEEEC
Confidence 5655544
No 451
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=47.93 E-value=61 Score=29.54 Aligned_cols=55 Identities=18% Similarity=0.314 Sum_probs=38.1
Q ss_pred CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 182 ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 182 ~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
++.+.+.+.++.+.+ +.++++|. +|.+.+.+.++.|.++.++++..+|.|=+.++
T Consensus 43 ~~~~~~~~ql~~~~~-~~~~~aik-------iG~l~~~~~v~~i~~~l~~~~~~vV~DPVm~~ 97 (246)
T PF08543_consen 43 VDSEMIKAQLDALLE-DMKFDAIK-------IGYLGSAEQVEIIADFLKKPKIPVVLDPVMGD 97 (246)
T ss_dssp --HHHHHHHHHHHHH-TSC-SEEE-------E-S-SSHHHHHHHHHHHHHTTTEEEEE---EE
T ss_pred CCHHHHHHHHHHhcc-cccccEEE-------EcccCCchhhhhHHHHHhccCCCEEEeccccc
Confidence 567888888876653 45677766 69999999999999999888999999977653
No 452
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=47.90 E-value=2e+02 Score=25.59 Aligned_cols=100 Identities=21% Similarity=0.301 Sum_probs=56.6
Q ss_pred EEecChHHHHHHHHHhhcCCCCeE--E-EcCC----CC--c--C---hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHH
Q 046900 124 VVTAGATAANELLTFILADPGDAL--L-VPTP----YY--P--G---FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEA 189 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~V--l-~~~p----~y--~--~---~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~ 189 (442)
++.+|+-.+..++..+.- .|..| + +..+ .| . . ....++ ..|+....++++... ....+.+.+
T Consensus 2 vl~SGGkDS~~al~~a~~-~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~-~lgip~~~i~~~~~~--~~~~~~l~~ 77 (218)
T TIGR03679 2 ALYSGGKDSNYALYKALE-EGHEVRCLITVVPENEESYMFHTPNIELTRLQAE-ALGIPLVKIETSGEK--EKEVEDLKG 77 (218)
T ss_pred eeecCcHHHHHHHHHHHH-cCCEEEEEEEeccCCCCccccCCCCHHHHHHHHH-HhCCCEEEEECCCCC--hHHHHHHHH
Confidence 566777777776655553 56544 2 2222 11 1 1 122344 478887777765211 123455777
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE
Q 046900 190 AYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 190 ~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v 236 (442)
++.+.... ....|+ +|.+.+......+-.+|.+.++.+
T Consensus 78 ~l~~~~~~--g~~~vv-------~G~i~sd~~~~~~e~v~~~~gl~~ 115 (218)
T TIGR03679 78 ALKELKRE--GVEGIV-------TGAIASRYQKSRIERICEELGLKV 115 (218)
T ss_pred HHHHHHHc--CCCEEE-------ECCcccHhHHHHHHHHHHhCCCeE
Confidence 77665443 344455 688888777777778887777643
No 453
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=47.90 E-value=81 Score=25.90 Aligned_cols=57 Identities=21% Similarity=0.153 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHH-HHHHHHHHHHh-cCc-EEEEeccCC
Q 046900 182 ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRS-VLEELLDFATR-KNI-HLVSDEIYS 243 (442)
Q Consensus 182 ~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~-~l~~l~~~~~~-~~~-~vi~De~y~ 243 (442)
.+.+.|.+.++++ ++..+|+--|-|+.|..-+.. ..+++++..++ .++ +...||.|.
T Consensus 41 ~~~~~l~~~i~~~-----~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~T 100 (138)
T PRK00109 41 PDWDRLEKLIKEW-----QPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLS 100 (138)
T ss_pred hHHHHHHHHHHHh-----CCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 3578888888875 677899999999888864433 35555554433 233 457898886
No 454
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=47.58 E-value=1.1e+02 Score=23.13 Aligned_cols=69 Identities=13% Similarity=0.147 Sum_probs=43.1
Q ss_pred cChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCc
Q 046900 155 PGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNI 234 (442)
Q Consensus 155 ~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~ 234 (442)
..|...+.. .|++.+.. ..++++.-....|+..+. ++++|++. |+ ..+-+-...+-+.|+++++
T Consensus 13 ~~~~~~~~~-~G~~~~~h--g~~~~~~~~~~~l~~~i~-------~aD~VIv~-----t~-~vsH~~~~~vk~~akk~~i 76 (97)
T PF10087_consen 13 RRYKRILEK-YGGKLIHH--GRDGGDEKKASRLPSKIK-------KADLVIVF-----TD-YVSHNAMWKVKKAAKKYGI 76 (97)
T ss_pred HHHHHHHHH-cCCEEEEE--ecCCCCccchhHHHHhcC-------CCCEEEEE-----eC-CcChHHHHHHHHHHHHcCC
Confidence 446666774 89988877 222333333344777665 45666553 22 2355667888899999998
Q ss_pred EEEEe
Q 046900 235 HLVSD 239 (442)
Q Consensus 235 ~vi~D 239 (442)
+++.=
T Consensus 77 p~~~~ 81 (97)
T PF10087_consen 77 PIIYS 81 (97)
T ss_pred cEEEE
Confidence 87643
No 455
>PRK07109 short chain dehydrogenase; Provisional
Probab=47.17 E-value=2.2e+02 Score=27.14 Aligned_cols=81 Identities=16% Similarity=0.208 Sum_probs=44.8
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH---HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD---RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+.+.|...|..|++..-.-.... ..++ ..|.++..+..|- -|.+.+++.+....+
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~-~~g~~~~~v~~Dv-----~d~~~v~~~~~~~~~ 81 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIR-AAGGEALAVVADV-----ADAEAVQAAADRAEE 81 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-HcCCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 345666655444444455777788877776543322221 2223 2567777777654 356777777765543
Q ss_pred cCCceeEEEE
Q 046900 197 KDMRVRGVLI 206 (442)
Q Consensus 197 ~~~~~~~v~l 206 (442)
+-.++..++.
T Consensus 82 ~~g~iD~lIn 91 (334)
T PRK07109 82 ELGPIDTWVN 91 (334)
T ss_pred HCCCCCEEEE
Confidence 3335554443
No 456
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=47.13 E-value=2.2e+02 Score=25.69 Aligned_cols=82 Identities=22% Similarity=0.288 Sum_probs=45.3
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
....++||.|+...=..+.+.|.+.|..|++..-. ..... .+. ..+.++..+..|- -|.+.+++.+.+..
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~i~~~~~~~~ 86 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIE-KEGRKVTFVQVDL-----TKPESAEKVVKEAL 86 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHH-hcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 34457777665554455667788889877665433 22222 222 1355555566553 24677777776554
Q ss_pred hcCCceeEEEEe
Q 046900 196 SKDMRVRGVLIT 207 (442)
Q Consensus 196 ~~~~~~~~v~l~ 207 (442)
+...+.+.++.+
T Consensus 87 ~~~g~id~li~~ 98 (258)
T PRK06935 87 EEFGKIDILVNN 98 (258)
T ss_pred HHcCCCCEEEEC
Confidence 433456655544
No 457
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=46.94 E-value=2.6e+02 Score=26.46 Aligned_cols=103 Identities=19% Similarity=0.186 Sum_probs=58.3
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCC--CeEEEc--CCCCcChHH--hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPG--DALLVP--TPYYPGFDR--DLRWRTGIKIVPIHCDSSNNFQITPQALEAAY 191 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~g--d~Vl~~--~p~y~~~~~--~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l 191 (442)
+...++++|-|.+.....++....+.| -+|++. .|.+.+... .+. ..|+++..++- ..+...+
T Consensus 113 i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~-~~gI~vtlI~D----------sa~~~~m 181 (301)
T TIGR00511 113 IRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELR-DYGIPVTLIVD----------SAVRYFM 181 (301)
T ss_pred cCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHH-HCCCCEEEEeh----------hHHHHHH
Confidence 345668888886666555555554444 244443 444444322 223 26888777751 2333334
Q ss_pred HHHHhcCCceeEEEEe-CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 192 KEAESKDMRVRGVLIT-NPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 192 ~~~~~~~~~~~~v~l~-~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
. ++..+++. .---..|.++++----.++-.|+.+++++++
T Consensus 182 ~-------~vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 182 K-------EVDHVVVGADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred H-------hCCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 3 34445443 2234556666666667888889999988765
No 458
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=46.77 E-value=1.8e+02 Score=26.50 Aligned_cols=99 Identities=17% Similarity=0.236 Sum_probs=60.1
Q ss_pred cEEEecChHHHHHH-HHHhhcCCCCeEEEcCCCCcChHHhHhhhcC-cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 122 RIVVTAGATAANEL-LTFILADPGDALLVPTPYYPGFDRDLRWRTG-IKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 122 ~i~~t~G~~~ai~~-~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G-~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
.|++.+|++.+|=. +.+.|.+.|-+|++..---......+.. .+ .++..+.+|- -|.+.+++.+....++-.
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~-~~~~~~~~~~~DV-----tD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADE-IGAGAALALALDV-----TDRAAVEAAIEALPEEFG 80 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHh-hccCceEEEeecc-----CCHHHHHHHHHHHHHhhC
Confidence 56777777777754 5678889998888776555555555553 66 3555555553 367777777776555445
Q ss_pred ceeEEEEeCCCCCCCcCC---CHHHHHHHHH
Q 046900 200 RVRGVLITNPSNPLGATI---QRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~NPtG~~~---~~~~l~~l~~ 227 (442)
++. ++++|-.-..|.-+ ..++++..++
T Consensus 81 ~iD-iLvNNAGl~~g~~~~~~~~~dw~~Mid 110 (246)
T COG4221 81 RID-ILVNNAGLALGDPLDEADLDDWDRMID 110 (246)
T ss_pred ccc-EEEecCCCCcCChhhhCCHHHHHHHHH
Confidence 666 45666543333433 3444544444
No 459
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=46.48 E-value=2.2e+02 Score=25.56 Aligned_cols=82 Identities=17% Similarity=0.137 Sum_probs=46.1
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH---HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD---RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+...|.+.|-.|++..-.-.... ..+.. .|.++..+..|- -|.+.+++.+.+..+
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKG-QGLSAHALAFDV-----TDHDAVRAAIDAFEA 83 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-cCceEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 345777776555445556777778887776543322211 22232 456666666554 356777777766544
Q ss_pred cCCceeEEEEe
Q 046900 197 KDMRVRGVLIT 207 (442)
Q Consensus 197 ~~~~~~~v~l~ 207 (442)
...+...++.+
T Consensus 84 ~~~~~d~li~~ 94 (255)
T PRK07523 84 EIGPIDILVNN 94 (255)
T ss_pred hcCCCCEEEEC
Confidence 33345555443
No 460
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=46.41 E-value=2.2e+02 Score=25.57 Aligned_cols=94 Identities=11% Similarity=0.079 Sum_probs=56.7
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
.-.|++..|+.-|...+ ..|++.|..|.+-.|....-...+.....++++.= . ++.+.+.
T Consensus 25 ~~~VLVVGGG~VA~RK~-~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r------~--~~~~dl~----------- 84 (223)
T PRK05562 25 KIKVLIIGGGKAAFIKG-KTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKG------N--YDKEFIK----------- 84 (223)
T ss_pred CCEEEEECCCHHHHHHH-HHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeC------C--CChHHhC-----------
Confidence 44799999999998887 56667888888888887544333321123333321 1 2334442
Q ss_pred ceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE-EEecc
Q 046900 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL-VSDEI 241 (442)
Q Consensus 200 ~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v-i~De~ 241 (442)
...+|+.+ .+ +.+-=++|.+.|++.++++ ++|+.
T Consensus 85 g~~LViaA-Td-------D~~vN~~I~~~a~~~~~lvn~vd~p 119 (223)
T PRK05562 85 DKHLIVIA-TD-------DEKLNNKIRKHCDRLYKLYIDCSDY 119 (223)
T ss_pred CCcEEEEC-CC-------CHHHHHHHHHHHHHcCCeEEEcCCc
Confidence 33445544 22 3445678899998877554 45654
No 461
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=46.38 E-value=2.2e+02 Score=25.43 Aligned_cols=81 Identities=11% Similarity=0.167 Sum_probs=44.0
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEc-CCCCcCh---HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVP-TPYYPGF---DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~---~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.+++|.|+...=..+.+.|.+.|..|++. ...-... ...++ ..+.++..+..|- -|.+.+.+.+++..+.
T Consensus 6 ~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 6 VALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIE-ALGRKALAVKANV-----GDVEKIKEMFAQIDEE 79 (250)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH-hcCCeEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 46666665544444567777888776642 2111111 11223 2466777776654 3677788777765433
Q ss_pred CCceeEEEEeC
Q 046900 198 DMRVRGVLITN 208 (442)
Q Consensus 198 ~~~~~~v~l~~ 208 (442)
..++++++.+.
T Consensus 80 ~~~id~vi~~a 90 (250)
T PRK08063 80 FGRLDVFVNNA 90 (250)
T ss_pred cCCCCEEEECC
Confidence 33456555543
No 462
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=46.17 E-value=40 Score=33.83 Aligned_cols=76 Identities=16% Similarity=0.292 Sum_probs=46.0
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee--EEEE----eCCC--CCCCcCCCHHHHHHHHHHHHhcCcEE
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR--GVLI----TNPS--NPLGATIQRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~--~v~l----~~P~--NPtG~~~~~~~l~~l~~~~~~~~~~v 236 (442)
..+++..+.+.++.+|.+..+.+.+.-+.-..++.... -.++ ..|. .+.|..|+.+++++|++.|+++++-|
T Consensus 34 ~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~~rgI~V 113 (445)
T cd06569 34 YKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAKARHIEV 113 (445)
T ss_pred hCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHHHcCCEE
Confidence 78899999988777888876665543221000000000 0011 1121 24466899999999999999999875
Q ss_pred EEecc
Q 046900 237 VSDEI 241 (442)
Q Consensus 237 i~De~ 241 (442)
| =|+
T Consensus 114 I-PEI 117 (445)
T cd06569 114 I-PEI 117 (445)
T ss_pred E-Ecc
Confidence 4 444
No 463
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=46.09 E-value=44 Score=31.95 Aligned_cols=73 Identities=14% Similarity=0.257 Sum_probs=49.6
Q ss_pred CCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc
Q 046900 153 YYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK 232 (442)
Q Consensus 153 ~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~ 232 (442)
.|++|...++ .-.++++++++...- ..+.+-.++. +-|.|++.-| .+++.++.++|++.|+++
T Consensus 60 ~y~syEeLak-d~~vDvVyi~~~~~q----H~evv~l~l~-------~~K~VL~EKP-----la~n~~e~~~iveaA~~r 122 (351)
T KOG2741|consen 60 AYGSYEELAK-DPEVDVVYISTPNPQ----HYEVVMLALN-------KGKHVLCEKP-----LAMNVAEAEEIVEAAEAR 122 (351)
T ss_pred cccCHHHHhc-CCCcCEEEeCCCCcc----HHHHHHHHHH-------cCCcEEeccc-----ccCCHHHHHHHHHHHHHc
Confidence 5899999888 478899998865321 1233333333 3345665533 356788999999999988
Q ss_pred CcEEEEeccCC
Q 046900 233 NIHLVSDEIYS 243 (442)
Q Consensus 233 ~~~vi~De~y~ 243 (442)
+ +.+.|..|.
T Consensus 123 g-v~~meg~~~ 132 (351)
T KOG2741|consen 123 G-VFFMEGLWW 132 (351)
T ss_pred C-cEEEeeeee
Confidence 8 677787765
No 464
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=45.93 E-value=1.1e+02 Score=28.76 Aligned_cols=94 Identities=20% Similarity=0.293 Sum_probs=53.7
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.|++|.|+--.=.-....|++.|-.|++-+....+....+.. .-.+++.-++ .|-+.|.+.+.+. ++
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~-~~~~f~~gDi-------~D~~~L~~vf~~~-----~i 68 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK-LQFKFYEGDL-------LDRALLTAVFEEN-----KI 68 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh-ccCceEEecc-------ccHHHHHHHHHhc-----CC
Confidence 478888865544555566777885555554444444444432 2133333332 4678888888874 55
Q ss_pred eEEE-----------EeCC-----CCCCCcCCCHHHHHHHHHHHHhcCcE
Q 046900 202 RGVL-----------ITNP-----SNPLGATIQRSVLEELLDFATRKNIH 235 (442)
Q Consensus 202 ~~v~-----------l~~P-----~NPtG~~~~~~~l~~l~~~~~~~~~~ 235 (442)
.+|+ +.+| ||-.| -..|++.|.++++.
T Consensus 69 daViHFAa~~~VgESv~~Pl~Yy~NNv~g-------Tl~Ll~am~~~gv~ 111 (329)
T COG1087 69 DAVVHFAASISVGESVQNPLKYYDNNVVG-------TLNLIEAMLQTGVK 111 (329)
T ss_pred CEEEECccccccchhhhCHHHHHhhchHh-------HHHHHHHHHHhCCC
Confidence 5554 2234 23333 34677888888753
No 465
>PRK06841 short chain dehydrogenase; Provisional
Probab=45.58 E-value=2.3e+02 Score=25.43 Aligned_cols=83 Identities=19% Similarity=0.109 Sum_probs=42.3
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.++...=..+...|.+.|..|++....... ........+.++..++.|- -|.+.+++.+.+..+...
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLLGGNAKGLVCDV-----SDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhhCCceEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 3456666554443344556677788877765443222 1111111233444555543 256777777665443333
Q ss_pred ceeEEEEeC
Q 046900 200 RVRGVLITN 208 (442)
Q Consensus 200 ~~~~v~l~~ 208 (442)
+..+++.+.
T Consensus 89 ~~d~vi~~a 97 (255)
T PRK06841 89 RIDILVNSA 97 (255)
T ss_pred CCCEEEECC
Confidence 456555543
No 466
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=45.51 E-value=2.2e+02 Score=25.34 Aligned_cols=83 Identities=14% Similarity=0.147 Sum_probs=45.1
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCc-ChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALLVPTPYYP-GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
+...++||.++...=..+...|.+.|..|++....-. .....+. ..+.++..++.|- -|.+.+++.+++..+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADL-----SDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 3445777776555444556777888877776543211 1122223 2455566666553 2567777777654433
Q ss_pred CCceeEEEEe
Q 046900 198 DMRVRGVLIT 207 (442)
Q Consensus 198 ~~~~~~v~l~ 207 (442)
..++..++.+
T Consensus 78 ~~~~d~li~~ 87 (248)
T TIGR01832 78 FGHIDILVNN 87 (248)
T ss_pred cCCCCEEEEC
Confidence 3356655443
No 467
>PRK08263 short chain dehydrogenase; Provisional
Probab=45.21 E-value=2.3e+02 Score=25.94 Aligned_cols=80 Identities=16% Similarity=0.116 Sum_probs=40.0
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.+++|.|+...=..+...|.+.|..|++..-.-........ ..+-.+..+..|- -|.+.+++.+....+....+
T Consensus 5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAE-KYGDRLLPLALDV-----TDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hccCCeeEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 46666554433344556677788777665432222222222 1333444555443 25677777666543333345
Q ss_pred eEEEEe
Q 046900 202 RGVLIT 207 (442)
Q Consensus 202 ~~v~l~ 207 (442)
.+++.+
T Consensus 79 d~vi~~ 84 (275)
T PRK08263 79 DIVVNN 84 (275)
T ss_pred CEEEEC
Confidence 555544
No 468
>PRK07478 short chain dehydrogenase; Provisional
Probab=44.91 E-value=2.3e+02 Score=25.39 Aligned_cols=81 Identities=14% Similarity=0.096 Sum_probs=43.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-...... ++ ..|.++..++.|- -|.+.+++.+++..++
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIR-AEGGEAVALAGDV-----RDEAYAKALVALAVER 80 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCcEEEEEcCC-----CCHHHHHHHHHHHHHh
Confidence 3466665544333445567778888877654332222222 22 1355666666553 2567777777665443
Q ss_pred CCceeEEEEe
Q 046900 198 DMRVRGVLIT 207 (442)
Q Consensus 198 ~~~~~~v~l~ 207 (442)
..++..++.+
T Consensus 81 ~~~id~li~~ 90 (254)
T PRK07478 81 FGGLDIAFNN 90 (254)
T ss_pred cCCCCEEEEC
Confidence 3355655444
No 469
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=44.33 E-value=18 Score=34.95 Aligned_cols=62 Identities=15% Similarity=0.417 Sum_probs=37.7
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
.++++..+.+.+..+|.+....+.+.-... . . .++.+ |..|+.+++++|++.|+++|+-||-
T Consensus 30 ~k~N~lhlhl~D~~~~~~~~~~~p~l~~~g-----a----~--~~~~~-~~~yT~~di~~lv~yA~~~gI~VIP 91 (351)
T PF00728_consen 30 YKLNVLHLHLSDDQGFRLESKSYPELTEKG-----A----Y--RPSDA-GGYYTKEDIRELVAYAKERGIEVIP 91 (351)
T ss_dssp TT-SEEEEEEESSTCB-BEBSTSTHHHHTT-----T----E--STTCT-ESEBEHHHHHHHHHHHHHTT-EEEE
T ss_pred cCCcEEEEEEecCCCCccccCCCccccccC-----c----c--ccccc-cccCCHHHHHHHHHHHHHcCCceee
Confidence 678888888877667776554443332110 0 0 01113 4499999999999999999986653
No 470
>PRK06196 oxidoreductase; Provisional
Probab=43.64 E-value=2.3e+02 Score=26.68 Aligned_cols=82 Identities=17% Similarity=0.141 Sum_probs=39.8
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
+...|+||.|+...=..+.+.|...|..|++..-.-...........++.+ +..|- -|.+.+++.+.+..+..
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~--~~~Dl-----~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEV--VMLDL-----ADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeE--EEccC-----CCHHHHHHHHHHHHhcC
Confidence 334566666544333344566777887777654222222222221122333 33332 25677777776654433
Q ss_pred CceeEEEEe
Q 046900 199 MRVRGVLIT 207 (442)
Q Consensus 199 ~~~~~v~l~ 207 (442)
.++..++.+
T Consensus 98 ~~iD~li~n 106 (315)
T PRK06196 98 RRIDILINN 106 (315)
T ss_pred CCCCEEEEC
Confidence 455554443
No 471
>PRK07825 short chain dehydrogenase; Provisional
Probab=43.50 E-value=2.6e+02 Score=25.47 Aligned_cols=81 Identities=16% Similarity=0.091 Sum_probs=39.0
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|-.|++..-.-......... .+ ++..+..|- -|.+.+++.+.+..+...+
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-~~-~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 78 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAE-LG-LVVGGPLDV-----TDPASFAAFLDAVEADLGP 78 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-hc-cceEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 3566665544333445566777887777654322222222221 33 233333332 2567777777655433234
Q ss_pred eeEEEEeCC
Q 046900 201 VRGVLITNP 209 (442)
Q Consensus 201 ~~~v~l~~P 209 (442)
...+ ++|.
T Consensus 79 id~l-i~~a 86 (273)
T PRK07825 79 IDVL-VNNA 86 (273)
T ss_pred CCEE-EECC
Confidence 4544 4444
No 472
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=43.47 E-value=35 Score=33.11 Aligned_cols=70 Identities=13% Similarity=0.251 Sum_probs=44.2
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCC-----CCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNP-----SNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P-----~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
.++++..+.+.++.+|.+..+.+.+.-.. |.....=...+| ..|.|..|+.+++++|++.|+++|+-||-
T Consensus 30 ~K~N~lhlHltDdq~~rle~~~~P~Lt~~----ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VIP 104 (357)
T cd06563 30 YKLNVFHWHLTDDQGWRIEIKKYPKLTEV----GAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVIP 104 (357)
T ss_pred hccceEEEeeecCCCceecccCcchhhhc----ccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEEE
Confidence 78888888887777788766554442111 000000000012 13557789999999999999999987654
No 473
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=42.97 E-value=2.4e+02 Score=25.06 Aligned_cols=82 Identities=17% Similarity=0.209 Sum_probs=45.3
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEc-CCCCcChH---HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVP-TPYYPGFD---RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
..++||.|+...=..+...|...|..|++. ...-.... ..+.. .|.++..++.|- -|.+.+.+.+++...
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 80 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGK-EGHDVYAVQADV-----SKVEDANRLVEEAVN 80 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHh-cCCeEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 456666665444445566677788887653 21111111 12221 456677777664 256777777776544
Q ss_pred cCCceeEEEEeC
Q 046900 197 KDMRVRGVLITN 208 (442)
Q Consensus 197 ~~~~~~~v~l~~ 208 (442)
...+++.++.+.
T Consensus 81 ~~~~id~vi~~a 92 (247)
T PRK12935 81 HFGKVDILVNNA 92 (247)
T ss_pred HcCCCCEEEECC
Confidence 334566666553
No 474
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=42.69 E-value=1.3e+02 Score=24.37 Aligned_cols=57 Identities=18% Similarity=0.085 Sum_probs=38.7
Q ss_pred CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHH-HHHHHHHH-HhcCc-EEEEeccCC
Q 046900 182 ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSV-LEELLDFA-TRKNI-HLVSDEIYS 243 (442)
Q Consensus 182 ~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~-l~~l~~~~-~~~~~-~vi~De~y~ 243 (442)
.+.+.|.+.++++ ++..+++--|-|+.|..-+... .+++++.. ++.++ +.++||-|.
T Consensus 35 ~~~~~l~~~i~~~-----~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 35 PDWSRIEELLKEW-----TPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred HHHHHHHHHHHHc-----CCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 4578888888875 6778999999998888754332 44444433 23344 457888876
No 475
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=42.60 E-value=79 Score=28.92 Aligned_cols=93 Identities=17% Similarity=0.201 Sum_probs=58.5
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCC-CcChHHhHhhhcCcEEEEEecCCCCCCcC-CHHHHHHHHHHHHhcC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPY-YPGFDRDLRWRTGIKIVPIHCDSSNNFQI-TPQALEAAYKEAESKD 198 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~-y~~~~~~~~~~~G~~v~~v~~~~~~~~~~-d~~~l~~~l~~~~~~~ 198 (442)
..|++..|++++-.++ ..|.+.|..|++..-+ |.. .. ..+..+.. ++ + |.+.+++.+++.
T Consensus 3 ~~IlvlgGT~egr~la-~~L~~~g~~v~~Svat~~g~----~~-~~~~~v~~------G~--l~~~~~l~~~l~~~---- 64 (248)
T PRK08057 3 PRILLLGGTSEARALA-RALAAAGVDIVLSLAGRTGG----PA-DLPGPVRV------GG--FGGAEGLAAYLREE---- 64 (248)
T ss_pred ceEEEEechHHHHHHH-HHHHhCCCeEEEEEccCCCC----cc-cCCceEEE------CC--CCCHHHHHHHHHHC----
Confidence 4599999999998776 4555667666655433 443 22 13443322 22 5 789999999863
Q ss_pred CceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 199 MRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
++++ +.+-+.|--..+| +.+.+.|++.|+..+-
T Consensus 65 -~i~~--VIDATHPfA~~is----~~a~~ac~~~~ipyiR 97 (248)
T PRK08057 65 -GIDL--VIDATHPYAAQIS----ANAAAACRALGIPYLR 97 (248)
T ss_pred -CCCE--EEECCCccHHHHH----HHHHHHHHHhCCcEEE
Confidence 5553 4456666554444 6667788888876553
No 476
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=42.55 E-value=2.9e+02 Score=25.84 Aligned_cols=104 Identities=18% Similarity=0.266 Sum_probs=65.5
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc-CCC-CeEEEcCCCC----cC-hHHhH
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA-DPG-DALLVPTPYY----PG-FDRDL 161 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~-~~g-d~Vl~~~p~y----~~-~~~~~ 161 (442)
..|+...+.+...+...+|+.+++......+-+.|++-.|++..-.-+..-++ +-| |.|-|-.-.. .+ ....+
T Consensus 74 paynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~~a~k~s~K~~~d~irV~~l~~nrgKGgAvR~g~ 153 (323)
T KOG2977|consen 74 PAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVEVALKFSRKLGDDNIRVIKLKKNRGKGGAVRKGM 153 (323)
T ss_pred ecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHHHHHHHHHHcCcceEEEeehhccCCCCcceehhh
Confidence 46888889999999999999988763333456678888887776665555554 455 6665543322 11 11112
Q ss_pred hhhcCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 162 RWRTGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 162 ~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
..+.|-.+.....|....| .|.+.|++++.+
T Consensus 154 l~~rG~~ilfadAdGaTkf-~d~ekLe~al~~ 184 (323)
T KOG2977|consen 154 LSSRGQKILFADADGATKF-ADLEKLEKALND 184 (323)
T ss_pred HhccCceEEEEcCCCCccC-CCHHHHHHHHHh
Confidence 2135656656555544334 389999999875
No 477
>PRK05693 short chain dehydrogenase; Provisional
Probab=42.51 E-value=2.7e+02 Score=25.40 Aligned_cols=76 Identities=13% Similarity=0.153 Sum_probs=38.9
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
++||.|+...=..+.+.|.+.|-.|++....-..... +. ..+...+..++ -|.+.+++.+....+...++.
T Consensus 4 vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~-~~~~~~~~~Dl-------~~~~~~~~~~~~~~~~~~~id 74 (274)
T PRK05693 4 VLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LA-AAGFTAVQLDV-------NDGAALARLAEELEAEHGGLD 74 (274)
T ss_pred EEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH-HCCCeEEEeeC-------CCHHHHHHHHHHHHHhcCCCC
Confidence 5566554433344556667778777765433222221 22 14555444433 246777777765544334556
Q ss_pred EEEEe
Q 046900 203 GVLIT 207 (442)
Q Consensus 203 ~v~l~ 207 (442)
.++.+
T Consensus 75 ~vi~~ 79 (274)
T PRK05693 75 VLINN 79 (274)
T ss_pred EEEEC
Confidence 55544
No 478
>PRK06484 short chain dehydrogenase; Validated
Probab=42.34 E-value=2.2e+02 Score=29.08 Aligned_cols=79 Identities=13% Similarity=0.106 Sum_probs=44.1
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.++||.|++..=..+.+.|.+.|..|++..-.-......... .|.++..+.+|- -|.+.+++.+.+..+...+.
T Consensus 7 ~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 7 VVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADS-LGPDHHALAMDV-----SDEAQIREGFEQLHREFGRI 80 (520)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hCCceeEEEecc-----CCHHHHHHHHHHHHHHhCCC
Confidence 456665555444455677888898777654332333333342 566666666553 25677777776654433455
Q ss_pred eEEEE
Q 046900 202 RGVLI 206 (442)
Q Consensus 202 ~~v~l 206 (442)
..++.
T Consensus 81 D~li~ 85 (520)
T PRK06484 81 DVLVN 85 (520)
T ss_pred CEEEE
Confidence 54443
No 479
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=42.33 E-value=2.6e+02 Score=25.28 Aligned_cols=83 Identities=13% Similarity=0.126 Sum_probs=46.3
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+...|...|-.|++..-.-...... +. ..|.++..++.|- -|.+.+++.+.+...
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYR-ELGIEAHGYVCDV-----TDEDGVQAMVSQIEK 83 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH-hcCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 34577776655444456666777887776654332222222 22 1355666676654 356777777766544
Q ss_pred cCCceeEEEEeC
Q 046900 197 KDMRVRGVLITN 208 (442)
Q Consensus 197 ~~~~~~~v~l~~ 208 (442)
.-.+..+++.+.
T Consensus 84 ~~~~id~li~~a 95 (265)
T PRK07097 84 EVGVIDILVNNA 95 (265)
T ss_pred hCCCCCEEEECC
Confidence 333556655553
No 480
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=42.32 E-value=1.5e+02 Score=26.83 Aligned_cols=83 Identities=14% Similarity=0.216 Sum_probs=43.1
Q ss_pred CCcEEEecCh--HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 120 LNRIVVTAGA--TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 120 ~~~i~~t~G~--~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
...+++|.|+ ...=..+.+.|.+.|..|++..-. ......+....+.++..+.+|- -|.+.+++.+++..++
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKLVDEEDLLVECDV-----ASDESIERAFATIKER 80 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhhccCceeEEeCCC-----CCHHHHHHHHHHHHHH
Confidence 3456666665 233345567777889888775432 1122222211233444555543 2567777776655433
Q ss_pred CCceeEEEEeCC
Q 046900 198 DMRVRGVLITNP 209 (442)
Q Consensus 198 ~~~~~~v~l~~P 209 (442)
..+..+ +++|.
T Consensus 81 ~g~iD~-lv~nA 91 (252)
T PRK06079 81 VGKIDG-IVHAI 91 (252)
T ss_pred hCCCCE-EEEcc
Confidence 335554 44444
No 481
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=42.18 E-value=2.4e+02 Score=24.68 Aligned_cols=101 Identities=15% Similarity=0.218 Sum_probs=60.0
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEE---EcCCC-Cc-------Ch---HHhHhhhcCcEEEEEecCCCCCCcCCHHHHH
Q 046900 123 IVVTAGATAANELLTFILADPGDALL---VPTPY-YP-------GF---DRDLRWRTGIKIVPIHCDSSNNFQITPQALE 188 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl---~~~p~-y~-------~~---~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~ 188 (442)
++..+|+..+..++..+.- .|..|. +..|. +. .. ...++ ..|+....++++.+. .--.+.+.
T Consensus 3 ~v~~SGGkDS~~al~~a~~-~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~-~lgipl~~i~~~~~~--e~~~~~l~ 78 (194)
T cd01994 3 VALISGGKDSCYALYRALE-EGHEVVALLNLTPEEGSSMMYHTVNHELLELQAE-AMGIPLIRIEISGEE--EDEVEDLK 78 (194)
T ss_pred EEEecCCHHHHHHHHHHHH-cCCEEEEEEEEecCCCCcccccccCHHHHHHHHH-HcCCcEEEEeCCCCc--hHHHHHHH
Confidence 4567788777777765553 454322 22222 11 11 22344 488888877764321 00136666
Q ss_pred HHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE
Q 046900 189 AAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 189 ~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v 236 (442)
+.+++...+ ....++ +|.+.+...+..+-++|.+.|+-.
T Consensus 79 ~~l~~~~~~--g~~~vv-------~G~i~sd~~~~~~e~~~~~~gl~~ 117 (194)
T cd01994 79 ELLRKLKEE--GVDAVV-------FGAILSEYQRTRVERVCERLGLEP 117 (194)
T ss_pred HHHHHHHHc--CCCEEE-------ECccccHHHHHHHHHHHHHcCCEE
Confidence 666665433 244444 799999999999999999988754
No 482
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=42.17 E-value=2.4e+02 Score=26.01 Aligned_cols=99 Identities=13% Similarity=0.115 Sum_probs=53.8
Q ss_pred CCcEEEecChH----HHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 120 LNRIVVTAGAT----AANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 120 ~~~i~~t~G~~----~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
...|++..|+. .++...+.++.-.-+.|-+..|. .....+. ..+-+++..++++ ..+.+++.+.
T Consensus 24 ~G~vliiaGs~~~~GA~ila~l~~~~~g~~~v~~~~~~--~~~~~i~-~~~pe~~~~~~~~------~~~~~~~~~~--- 91 (272)
T TIGR00196 24 YGRVLIIGGSDDYSGAPLLAALAALRAGAGLVTVAAPE--NVITLIN-SVSPELIVHRLGW------KVDEDEELLE--- 91 (272)
T ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHhCCCeEEEEEch--hhHHHHh-hcCCEEEEecchh------hHHHHHhhhc---
Confidence 44577777752 44444455553333455555544 1122334 2566666655431 2344444432
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
+..++++ +++-|++.. ..++++.+++++..+|+|-
T Consensus 92 ----~~davvi-g~Gl~~~~~-----~~~l~~~~~~~~~pvVlDa 126 (272)
T TIGR00196 92 ----RYDVVVI-GPGLGQDPS-----FKKAVEEVLELDKPVVLDA 126 (272)
T ss_pred ----cCCEEEE-cCCCCCCHH-----HHHHHHHHHhcCCCEEEEh
Confidence 3344444 555444433 7778888888899999994
No 483
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=42.13 E-value=2e+02 Score=25.97 Aligned_cols=102 Identities=14% Similarity=0.116 Sum_probs=51.7
Q ss_pred CCCcEEEecChH--HHHHHHHHhhcCCCCeEEEcCC-------CCcC-------hHHhHhhhcCcEEEEEecCCCCCCcC
Q 046900 119 DLNRIVVTAGAT--AANELLTFILADPGDALLVPTP-------YYPG-------FDRDLRWRTGIKIVPIHCDSSNNFQI 182 (442)
Q Consensus 119 ~~~~i~~t~G~~--~ai~~~~~~l~~~gd~Vl~~~p-------~y~~-------~~~~~~~~~G~~v~~v~~~~~~~~~~ 182 (442)
....++||.|+. ..=..+.+.|...|..|++..- .+.. ....+. ..|.++..++.|- -
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~-----~ 78 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDL-----T 78 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCC-----C
Confidence 344577776652 2223344666678877776421 1111 111223 2577777777653 2
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEeCCCC-CC--CcCCCHHHHHHHHH
Q 046900 183 TPQALEAAYKEAESKDMRVRGVLITNPSN-PL--GATIQRSVLEELLD 227 (442)
Q Consensus 183 d~~~l~~~l~~~~~~~~~~~~v~l~~P~N-Pt--G~~~~~~~l~~l~~ 227 (442)
|.+.+++.+.+..+...++.. ++.|+.. .. -.-.+.+++++..+
T Consensus 79 ~~~~i~~~~~~~~~~~g~id~-li~~ag~~~~~~~~~~~~~~~~~~~~ 125 (256)
T PRK12859 79 QNDAPKELLNKVTEQLGYPHI-LVNNAAYSTNNDFSNLTAEELDKHYM 125 (256)
T ss_pred CHHHHHHHHHHHHHHcCCCcE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 577888887765543334554 4444431 11 12345555555444
No 484
>PRK06482 short chain dehydrogenase; Provisional
Probab=42.13 E-value=2.6e+02 Score=25.49 Aligned_cols=80 Identities=18% Similarity=0.114 Sum_probs=40.5
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.++||.|+...=..+...|.+.|..|++..-.......... ..+.++..+..|- -|.+.+++.+.+..+...++
T Consensus 4 ~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKA-RYGDRLWVLQLDV-----TDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hccCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 36676664433344556777788877765433222222112 1233444444443 25677777776543333345
Q ss_pred eEEEEe
Q 046900 202 RGVLIT 207 (442)
Q Consensus 202 ~~v~l~ 207 (442)
..|+.+
T Consensus 78 d~vi~~ 83 (276)
T PRK06482 78 DVVVSN 83 (276)
T ss_pred CEEEEC
Confidence 555544
No 485
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=41.89 E-value=35 Score=35.62 Aligned_cols=34 Identities=15% Similarity=0.064 Sum_probs=28.8
Q ss_pred CCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 213 LGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 213 tG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
|-..=++++++++++.|.++|+-||.|=+|..|-
T Consensus 207 ~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~ 240 (628)
T COG0296 207 TSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFP 240 (628)
T ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCC
Confidence 3333467999999999999999999999999754
No 486
>PRK07890 short chain dehydrogenase; Provisional
Probab=41.85 E-value=2.1e+02 Score=25.66 Aligned_cols=82 Identities=13% Similarity=0.090 Sum_probs=44.5
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
..++||.|++..=..+...|...|..|++..-.-......... ..+.++..+..|- -|.+.+++.+.+..++-
T Consensus 6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDI-----TDEDQCANLVALALERF 80 (258)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCC-----CCHHHHHHHHHHHHHHc
Confidence 4577777655555556677778898887765332222222111 1245555555543 25677777776543333
Q ss_pred CceeEEEEe
Q 046900 199 MRVRGVLIT 207 (442)
Q Consensus 199 ~~~~~v~l~ 207 (442)
.+++.++.+
T Consensus 81 g~~d~vi~~ 89 (258)
T PRK07890 81 GRVDALVNN 89 (258)
T ss_pred CCccEEEEC
Confidence 355655544
No 487
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=41.78 E-value=1.3e+02 Score=28.63 Aligned_cols=70 Identities=20% Similarity=0.238 Sum_probs=37.2
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH---hhhcC--cEEEEEecCCCCCCcCCHHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL---RWRTG--IKIVPIHCDSSNNFQITPQALEAAYKEA 194 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~~G--~~v~~v~~~~~~~~~~d~~~l~~~l~~~ 194 (442)
+..|++|.|+--.=......|++.|+.|++-+.--..+...+ +...+ -.+..+..|- -|.+.|++.++..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl-----~D~~~L~kvF~~~ 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDL-----NDAEALEKLFSEV 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEecc-----CCHHHHHHHHhhc
Confidence 346888888433223333455678877766544332222222 21133 3344443332 3788999988764
No 488
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=41.64 E-value=2.5e+02 Score=26.06 Aligned_cols=89 Identities=15% Similarity=0.152 Sum_probs=47.4
Q ss_pred HHHhhcCCCCeEEEcCCCCcC-hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCC
Q 046900 136 LTFILADPGDALLVPTPYYPG-FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLG 214 (442)
Q Consensus 136 ~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG 214 (442)
++..|.+.|-.|.+-.-.... ....++. .|.+++.++-. .+|.-|.+++.+.+++. ++.++++.+.
T Consensus 23 LA~~l~~~g~~v~f~~~~~~~~~~~~i~~-~g~~v~~~~~~--~~~~~d~~~~~~~l~~~-----~~d~vV~D~y----- 89 (279)
T TIGR03590 23 LARALHAQGAEVAFACKPLPGDLIDLLLS-AGFPVYELPDE--SSRYDDALELINLLEEE-----KFDILIVDHY----- 89 (279)
T ss_pred HHHHHHHCCCEEEEEeCCCCHHHHHHHHH-cCCeEEEecCC--CchhhhHHHHHHHHHhc-----CCCEEEEcCC-----
Confidence 345554455444433322333 2455553 78888777532 23445677788887753 5667777655
Q ss_pred cCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 215 ATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 215 ~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
-++.+..+.+.+. .-.++++||.
T Consensus 90 -~~~~~~~~~~k~~---~~~l~~iDD~ 112 (279)
T TIGR03590 90 -GLDADWEKLIKEF---GRKILVIDDL 112 (279)
T ss_pred -CCCHHHHHHHHHh---CCeEEEEecC
Confidence 3444434433322 2245677765
No 489
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=41.54 E-value=2.6e+02 Score=24.95 Aligned_cols=76 Identities=9% Similarity=0.093 Sum_probs=43.4
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...+++|.++...=..+...|.+.|..|++..... .. ..+.++..++.|- -|.+.+++.+.+..+...
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LT-QEDYPFATFVLDV-----SDAAAVAQVCQRLLAETG 75 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hh-hcCCceEEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 44577777655444555677778887777654332 22 1344555565553 356777777765443334
Q ss_pred ceeEEEEe
Q 046900 200 RVRGVLIT 207 (442)
Q Consensus 200 ~~~~v~l~ 207 (442)
+..+++.+
T Consensus 76 ~id~vi~~ 83 (252)
T PRK08220 76 PLDVLVNA 83 (252)
T ss_pred CCCEEEEC
Confidence 45555443
No 490
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=40.48 E-value=1.7e+02 Score=22.69 Aligned_cols=66 Identities=21% Similarity=0.248 Sum_probs=43.3
Q ss_pred HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc--CcEEEE
Q 046900 161 LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK--NIHLVS 238 (442)
Q Consensus 161 ~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~--~~~vi~ 238 (442)
++ ..|.++..++.+ .+.+++.+.+.+. ++++|.++.+. ..+.....++++..++. ++.+++
T Consensus 24 l~-~~G~~v~~~d~~------~~~~~l~~~~~~~-----~pd~V~iS~~~-----~~~~~~~~~l~~~~k~~~p~~~iv~ 86 (121)
T PF02310_consen 24 LR-KAGHEVDILDAN------VPPEELVEALRAE-----RPDVVGISVSM-----TPNLPEAKRLARAIKERNPNIPIVV 86 (121)
T ss_dssp HH-HTTBEEEEEESS------B-HHHHHHHHHHT-----TCSEEEEEESS-----STHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred HH-HCCCeEEEECCC------CCHHHHHHHHhcC-----CCcEEEEEccC-----cCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 44 379999888654 3568888877763 67778776432 23345677888877766 677777
Q ss_pred eccCC
Q 046900 239 DEIYS 243 (442)
Q Consensus 239 De~y~ 243 (442)
=..+.
T Consensus 87 GG~~~ 91 (121)
T PF02310_consen 87 GGPHA 91 (121)
T ss_dssp EESSS
T ss_pred ECCch
Confidence 65554
No 491
>PRK06179 short chain dehydrogenase; Provisional
Probab=40.21 E-value=2.9e+02 Score=25.07 Aligned_cols=95 Identities=15% Similarity=0.148 Sum_probs=48.2
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.++||.|+...=..+.+.|.+.|..|++....-... -. ..+++++..++ -|.+.++++++...+...++
T Consensus 6 ~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~---~~-~~~~~~~~~D~-------~d~~~~~~~~~~~~~~~g~~ 74 (270)
T PRK06179 6 VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA---AP-IPGVELLELDV-------TDDASVQAAVDEVIARAGRI 74 (270)
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc---cc-cCCCeeEEeec-------CCHHHHHHHHHHHHHhCCCC
Confidence 466666544433445567777888777654321111 11 13445444433 25678888777654443455
Q ss_pred eEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 202 RGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 202 ~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
..++.+.-..+.|. -.+.++.+++.+
T Consensus 75 d~li~~ag~~~~~~~~~~~~~~~~~~~~ 102 (270)
T PRK06179 75 DVLVNNAGVGLAGAAEESSIAQAQALFD 102 (270)
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 65544432222222 234455555544
No 492
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=40.18 E-value=1.4e+02 Score=27.05 Aligned_cols=81 Identities=11% Similarity=0.035 Sum_probs=41.5
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+...|.+.|..|++..-.-........ ..+.++..++.|- -|.+.+++.+.+..+...
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 79 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQ-RFGDHVLVVEGDV-----TSYADNQRAVDQTVDAFG 79 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhCCcceEEEccC-----CCHHHHHHHHHHHHHhcC
Confidence 3456666655444444566777788777765433222222222 1343444555443 256677777665443333
Q ss_pred ceeEEEE
Q 046900 200 RVRGVLI 206 (442)
Q Consensus 200 ~~~~v~l 206 (442)
++..++-
T Consensus 80 ~id~li~ 86 (263)
T PRK06200 80 KLDCFVG 86 (263)
T ss_pred CCCEEEE
Confidence 5554443
No 493
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=40.08 E-value=1.5e+02 Score=26.82 Aligned_cols=81 Identities=14% Similarity=0.102 Sum_probs=40.5
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...+++|.|+...=..+.+.|.+.|..|++..-.-........ ..+.++..+..|- -|.+.+.+.+++..++-.
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 78 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA-AHGDAVVGVEGDV-----RSLDDHKEAVARCVAAFG 78 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcCCceEEEEecc-----CCHHHHHHHHHHHHHHhC
Confidence 3456666554433344556777889888775432222222222 1344555555443 245666666655433323
Q ss_pred ceeEEEE
Q 046900 200 RVRGVLI 206 (442)
Q Consensus 200 ~~~~v~l 206 (442)
++..++.
T Consensus 79 ~id~li~ 85 (262)
T TIGR03325 79 KIDCLIP 85 (262)
T ss_pred CCCEEEE
Confidence 4554443
No 494
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=39.99 E-value=2.8e+02 Score=24.83 Aligned_cols=79 Identities=11% Similarity=0.090 Sum_probs=39.2
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
|++|.|+...=..+...|.+.|..|++..-.-........ ..+.++..+..|- -|.+.+++.+.+..+...++.
T Consensus 3 vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~Dl-----~~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD-ELGDNLYIAQLDV-----RNRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-HhccceEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 5566543333334456677788777765432111222222 1344555555543 256777776665433333455
Q ss_pred EEEEe
Q 046900 203 GVLIT 207 (442)
Q Consensus 203 ~v~l~ 207 (442)
.++.+
T Consensus 77 ~vi~~ 81 (248)
T PRK10538 77 VLVNN 81 (248)
T ss_pred EEEEC
Confidence 55543
No 495
>PRK02308 uvsE putative UV damage endonuclease; Provisional
Probab=39.83 E-value=3e+02 Score=26.08 Aligned_cols=65 Identities=14% Similarity=0.105 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHH---HhCCCeeecCCceEEEEEecCCc---ccccChhhHHHHHHHHHHcCcEEE
Q 046900 333 KTNRERLQKRYQMIIEGL---RSAGIECLKGNAGLFCWMNLSPL---LEEQTREGELALWDSMLHEVKLNI 397 (442)
Q Consensus 333 ~~~~~~~~~~~~~l~~~L---~~~g~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~gi~v 397 (442)
+...+....+.+.+...| .+.++.++.-.+.++-+...|.. ..........+.+..+++++|+.+
T Consensus 37 ~~l~~~~~~Nl~~l~~~l~~~~~~~I~~~R~sS~l~P~~~h~~~~~w~~~~~~~~~~~~~g~~~~~~~irl 107 (303)
T PRK02308 37 EKLEEIALSNLENLLRILKYNIAHGIGLFRLSSSLIPLATHPELEGWDYIEPFKEELREIGEFIKEHNIRL 107 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEcccCcCCCCCChhhcccCCCCCCHHHHHHHHHHHHHcCCCe
Confidence 334444444444444444 45688877655555444443321 111111234444555666667754
No 496
>PRK07791 short chain dehydrogenase; Provisional
Probab=39.77 E-value=3.1e+02 Score=25.35 Aligned_cols=83 Identities=12% Similarity=0.020 Sum_probs=44.5
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCC---------cChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHH
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYY---------PGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEA 189 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y---------~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~ 189 (442)
..++||.|++..=..+...|.+.|..|++..-.. ......... ..|.++..+..|- -|.+.+++
T Consensus 7 k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~v~~ 81 (286)
T PRK07791 7 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDI-----ADWDGAAN 81 (286)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCC-----CCHHHHHH
Confidence 3466666665555556677888887777653222 111121111 1355666666553 35677777
Q ss_pred HHHHHHhcCCceeEEEEeCC
Q 046900 190 AYKEAESKDMRVRGVLITNP 209 (442)
Q Consensus 190 ~l~~~~~~~~~~~~v~l~~P 209 (442)
.+++..+...++..+ ++|.
T Consensus 82 ~~~~~~~~~g~id~l-v~nA 100 (286)
T PRK07791 82 LVDAAVETFGGLDVL-VNNA 100 (286)
T ss_pred HHHHHHHhcCCCCEE-EECC
Confidence 776654433455554 4443
No 497
>PRK12743 oxidoreductase; Provisional
Probab=39.18 E-value=2.8e+02 Score=24.97 Aligned_cols=80 Identities=15% Similarity=0.118 Sum_probs=43.4
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcC-CCCcCh---HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPT-PYYPGF---DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~-p~y~~~---~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.++||.|++..=..+.+.|.+.|-.|++.. ..-... ...++ ..|.++..+..|- -|.+.+++.+.+..+.
T Consensus 4 ~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 77 (256)
T PRK12743 4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVR-SHGVRAEIRQLDL-----SDLPEGAQALDKLIQR 77 (256)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-hcCCceEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 466666655544556677888898876542 222211 12222 2465666665553 2567777766655433
Q ss_pred CCceeEEEEe
Q 046900 198 DMRVRGVLIT 207 (442)
Q Consensus 198 ~~~~~~v~l~ 207 (442)
..++..++.+
T Consensus 78 ~~~id~li~~ 87 (256)
T PRK12743 78 LGRIDVLVNN 87 (256)
T ss_pred cCCCCEEEEC
Confidence 3355655544
No 498
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=39.13 E-value=1.7e+02 Score=29.06 Aligned_cols=92 Identities=24% Similarity=0.294 Sum_probs=58.7
Q ss_pred EecChHHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 125 VTAGATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
+.-|+.+...+++..|...| ..|.+.+=+|......+.. .|++++ ..+++...+.+ .++
T Consensus 182 lvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~-~~~~~~------------~l~el~~~l~~-------~Dv 241 (414)
T COG0373 182 LVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKK-LGAEAV------------ALEELLEALAE-------ADV 241 (414)
T ss_pred EEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH-hCCeee------------cHHHHHHhhhh-------CCE
Confidence 34455566778888998888 8899999999888888885 785543 34666777664 234
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
|| +.-+-|+ .+++.+.+++....- .+ ++++|=+
T Consensus 242 Vi-ssTsa~~-~ii~~~~ve~a~~~r--~~-~livDia 274 (414)
T COG0373 242 VI-SSTSAPH-PIITREMVERALKIR--KR-LLIVDIA 274 (414)
T ss_pred EE-EecCCCc-cccCHHHHHHHHhcc--cC-eEEEEec
Confidence 44 4333333 245666666555422 23 7888844
No 499
>PRK05650 short chain dehydrogenase; Provisional
Probab=38.96 E-value=3e+02 Score=25.00 Aligned_cols=79 Identities=19% Similarity=0.168 Sum_probs=41.9
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
|++|.|++..=..+...|.+.|..|++....-...... +. ..|.++..+..|- .|.+.+++.+........
T Consensus 3 vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~D~-----~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 3 VMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLR-EAGGDGFYQRCDV-----RDYSQLTALAQACEEKWG 76 (270)
T ss_pred EEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 66666654444455667778887777654332222221 22 1355666666553 256666666654433333
Q ss_pred ceeEEEEe
Q 046900 200 RVRGVLIT 207 (442)
Q Consensus 200 ~~~~v~l~ 207 (442)
+...++.+
T Consensus 77 ~id~lI~~ 84 (270)
T PRK05650 77 GIDVIVNN 84 (270)
T ss_pred CCCEEEEC
Confidence 45555544
No 500
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=38.67 E-value=63 Score=30.90 Aligned_cols=26 Identities=12% Similarity=0.388 Sum_probs=22.7
Q ss_pred CCCcCCCHHHHHHHHHHHHhcCcEEE
Q 046900 212 PLGATIQRSVLEELLDFATRKNIHLV 237 (442)
Q Consensus 212 PtG~~~~~~~l~~l~~~~~~~~~~vi 237 (442)
+.+-.++.+++++|++.|+++|+-||
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 45778999999999999999998664
Done!