Query 046900
Match_columns 442
No_of_seqs 241 out of 2905
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 09:27:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046900.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046900hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3piu_A 1-aminocyclopropane-1-c 100.0 6.8E-59 2.3E-63 463.9 41.9 425 14-438 4-433 (435)
2 1iay_A ACC synthase 2, 1-amino 100.0 3.2E-56 1.1E-60 443.7 44.4 424 13-436 1-426 (428)
3 1b5p_A Protein (aspartate amin 100.0 6.6E-51 2.3E-55 399.7 29.8 351 47-435 30-383 (385)
4 3tcm_A Alanine aminotransferas 100.0 6.7E-49 2.3E-53 397.7 39.7 349 88-440 127-497 (500)
5 3aow_A Putative uncharacterize 100.0 1.1E-48 3.7E-53 391.1 35.8 361 48-439 76-447 (448)
6 3b46_A Aminotransferase BNA3; 100.0 4.1E-49 1.4E-53 394.5 29.2 360 47-433 56-443 (447)
7 3jtx_A Aminotransferase; NP_28 100.0 6.4E-48 2.2E-52 379.7 36.4 353 45-434 27-395 (396)
8 3ihj_A Alanine aminotransferas 100.0 1.3E-47 4.3E-52 387.8 36.8 349 88-440 122-496 (498)
9 3k7y_A Aspartate aminotransfer 100.0 1.7E-48 5.8E-53 383.2 29.5 342 48-435 29-403 (405)
10 2o1b_A Aminotransferase, class 100.0 2.5E-48 8.5E-53 383.8 30.4 353 47-436 46-402 (404)
11 2x5d_A Probable aminotransfera 100.0 2.6E-48 8.9E-53 384.7 30.3 360 47-438 36-399 (412)
12 1gd9_A Aspartate aminotransfer 100.0 7.1E-48 2.4E-52 378.5 32.7 357 48-437 26-386 (389)
13 3dyd_A Tyrosine aminotransfera 100.0 5.1E-48 1.7E-52 384.3 28.6 360 47-438 53-425 (427)
14 3fvs_A Kynurenine--oxoglutarat 100.0 2.9E-48 9.9E-53 385.4 26.2 364 48-436 28-421 (422)
15 3ezs_A Aminotransferase ASPB; 100.0 3.8E-47 1.3E-51 371.5 33.5 345 49-437 24-375 (376)
16 3e2y_A Kynurenine-oxoglutarate 100.0 5.7E-48 2E-52 381.8 27.9 360 47-432 22-408 (410)
17 2dou_A Probable N-succinyldiam 100.0 1.8E-47 6.3E-52 373.9 31.0 348 47-434 24-375 (376)
18 3h14_A Aminotransferase, class 100.0 1.9E-47 6.6E-52 375.7 30.9 351 47-440 30-385 (391)
19 1c7n_A Cystalysin; transferase 100.0 1.3E-47 4.4E-52 377.9 29.5 361 47-441 30-397 (399)
20 3ele_A Amino transferase; RER0 100.0 3.3E-47 1.1E-51 374.9 31.7 348 47-438 34-397 (398)
21 1u08_A Hypothetical aminotrans 100.0 2.9E-47 9.9E-52 373.8 31.0 350 48-432 30-385 (386)
22 3fdb_A Beta C-S lyase, putativ 100.0 1.2E-47 4E-52 375.2 27.8 348 47-436 22-375 (377)
23 2r2n_A Kynurenine/alpha-aminoa 100.0 3.8E-47 1.3E-51 377.8 31.4 328 89-437 72-424 (425)
24 1j32_A Aspartate aminotransfer 100.0 6.9E-47 2.4E-51 371.4 31.3 355 47-437 29-387 (388)
25 1yiz_A Kynurenine aminotransfe 100.0 3.3E-47 1.1E-51 378.8 29.3 363 48-435 37-427 (429)
26 3kax_A Aminotransferase, class 100.0 8.1E-47 2.8E-51 369.9 30.9 353 47-434 23-382 (383)
27 1bw0_A TAT, protein (tyrosine 100.0 5.9E-47 2E-51 375.4 30.1 364 46-438 31-414 (416)
28 1vp4_A Aminotransferase, putat 100.0 2.5E-46 8.5E-51 372.0 34.6 364 48-441 43-422 (425)
29 1o4s_A Aspartate aminotransfer 100.0 1.7E-46 6E-51 368.8 33.0 345 47-435 40-387 (389)
30 3dzz_A Putative pyridoxal 5'-p 100.0 9.3E-47 3.2E-51 370.5 30.0 357 47-437 26-389 (391)
31 1xi9_A Putative transaminase; 100.0 2.1E-46 7.1E-51 370.3 31.1 355 47-437 37-403 (406)
32 3qgu_A LL-diaminopimelate amin 100.0 6.3E-47 2.1E-51 379.0 27.6 354 47-438 68-441 (449)
33 2o0r_A RV0858C (N-succinyldiam 100.0 6.8E-47 2.3E-51 374.4 26.3 356 49-438 26-397 (411)
34 3nra_A Aspartate aminotransfer 100.0 2.3E-46 7.9E-51 369.8 29.4 359 47-438 38-406 (407)
35 1d2f_A MALY protein; aminotran 100.0 2.5E-46 8.4E-51 367.7 29.1 353 47-437 27-389 (390)
36 2x5f_A Aspartate_tyrosine_phen 100.0 1.2E-45 4.1E-50 367.6 33.7 355 48-437 47-429 (430)
37 4dq6_A Putative pyridoxal phos 100.0 1.1E-45 3.9E-50 362.8 32.5 352 47-434 31-390 (391)
38 3get_A Histidinol-phosphate am 100.0 1.7E-45 5.7E-50 358.5 33.1 332 48-434 30-364 (365)
39 3rq1_A Aminotransferase class 100.0 1.4E-45 4.7E-50 365.8 33.0 352 48-438 38-416 (418)
40 3g0t_A Putative aminotransfera 100.0 2.6E-46 8.7E-51 373.1 26.6 357 47-436 43-436 (437)
41 2zyj_A Alpha-aminodipate amino 100.0 5.4E-45 1.9E-49 359.0 33.9 353 48-439 32-395 (397)
42 2zy4_A L-aspartate beta-decarb 100.0 6.2E-46 2.1E-50 378.4 27.5 356 50-439 106-524 (546)
43 2z61_A Probable aspartate amin 100.0 1.8E-45 6.1E-50 359.0 28.9 339 47-435 28-369 (370)
44 3ly1_A Putative histidinol-pho 100.0 2.5E-44 8.6E-49 348.6 36.8 337 46-436 14-351 (354)
45 2zc0_A Alanine glyoxylate tran 100.0 6.8E-45 2.3E-49 359.4 33.2 360 49-438 35-405 (407)
46 2gb3_A Aspartate aminotransfer 100.0 5.1E-45 1.8E-49 360.7 32.3 353 47-440 42-405 (409)
47 3ppl_A Aspartate aminotransfer 100.0 6.6E-45 2.2E-49 362.0 33.1 325 87-440 70-423 (427)
48 3ei9_A LL-diaminopimelate amin 100.0 5.5E-46 1.9E-50 370.3 24.9 350 47-435 55-426 (432)
49 3t18_A Aminotransferase class 100.0 5.8E-45 2E-49 360.7 31.9 350 48-439 37-412 (413)
50 3l8a_A METC, putative aminotra 100.0 1.6E-45 5.4E-50 365.7 27.6 355 47-435 60-420 (421)
51 3ffh_A Histidinol-phosphate am 100.0 3.6E-44 1.2E-48 348.9 34.4 330 48-434 32-363 (363)
52 3d6k_A Putative aminotransfera 100.0 7.9E-45 2.7E-49 360.8 30.2 355 49-439 33-420 (422)
53 1v2d_A Glutamine aminotransfer 100.0 6.7E-45 2.3E-49 356.4 29.2 342 48-439 25-373 (381)
54 1fg7_A Histidinol phosphate am 100.0 3.8E-44 1.3E-48 347.8 32.4 322 48-433 29-354 (356)
55 4f4e_A Aromatic-amino-acid ami 100.0 1.4E-44 4.8E-49 358.8 28.7 345 48-434 49-419 (420)
56 7aat_A Aspartate aminotransfer 100.0 9.2E-45 3.1E-49 357.9 26.2 345 48-434 28-400 (401)
57 3asa_A LL-diaminopimelate amin 100.0 2.1E-45 7.3E-50 362.3 21.6 351 47-438 32-394 (400)
58 3euc_A Histidinol-phosphate am 100.0 3.5E-43 1.2E-47 342.3 36.9 339 40-435 23-366 (367)
59 3f6t_A Aspartate aminotransfer 100.0 1.4E-44 4.7E-49 368.4 26.1 358 49-440 104-528 (533)
60 3op7_A Aminotransferase class 100.0 7.4E-44 2.5E-48 348.1 28.6 313 89-438 57-372 (375)
61 1lc5_A COBD, L-threonine-O-3-p 100.0 1.9E-43 6.4E-48 344.0 31.2 336 46-437 22-360 (364)
62 3fsl_A Aromatic-amino-acid ami 100.0 5.5E-44 1.9E-48 351.7 27.4 345 47-433 25-396 (397)
63 3ez1_A Aminotransferase MOCR f 100.0 1.5E-43 5.2E-48 351.7 29.2 325 88-440 62-418 (423)
64 3b1d_A Betac-S lyase; HET: PLP 100.0 2.1E-47 7.3E-52 375.6 0.0 354 48-435 31-391 (392)
65 3g7q_A Valine-pyruvate aminotr 100.0 2.1E-43 7.1E-48 349.9 27.3 357 48-439 31-415 (417)
66 4eu1_A Mitochondrial aspartate 100.0 1.9E-43 6.4E-48 349.5 26.8 344 48-434 41-408 (409)
67 3ftb_A Histidinol-phosphate am 100.0 1.7E-42 5.8E-47 336.6 32.4 333 46-435 24-359 (361)
68 1yaa_A Aspartate aminotransfer 100.0 1.4E-42 4.9E-47 343.5 30.1 348 47-436 28-410 (412)
69 1ajs_A Aspartate aminotransfer 100.0 1.1E-42 3.8E-47 344.2 29.3 349 47-436 29-410 (412)
70 3if2_A Aminotransferase; YP_26 100.0 2.3E-42 7.9E-47 345.3 31.5 393 13-439 3-442 (444)
71 3p1t_A Putative histidinol-pho 100.0 4E-42 1.4E-46 330.8 31.5 322 45-435 13-335 (337)
72 2hox_A ALLIIN lyase 1; cystein 100.0 1.1E-44 3.9E-49 359.5 13.7 355 21-436 21-424 (427)
73 2q7w_A Aspartate aminotransfer 100.0 4.7E-43 1.6E-47 344.9 24.3 345 48-434 26-396 (396)
74 3fkd_A L-threonine-O-3-phospha 100.0 3.4E-42 1.2E-46 333.3 28.8 326 48-438 15-343 (350)
75 3meb_A Aspartate aminotransfer 100.0 4E-42 1.4E-46 343.8 29.7 345 49-437 50-444 (448)
76 3bwn_A AT1G70560, L-tryptophan 100.0 3.7E-43 1.3E-47 345.1 19.0 334 46-437 20-387 (391)
77 3cq5_A Histidinol-phosphate am 100.0 5.1E-41 1.8E-45 327.4 33.8 332 51-435 33-366 (369)
78 4h51_A Aspartate aminotransfer 100.0 2E-41 7E-46 332.9 28.9 346 50-439 46-419 (420)
79 3hdo_A Histidinol-phosphate am 100.0 8.6E-41 2.9E-45 324.7 32.9 330 47-437 25-355 (360)
80 2ay1_A Aroat, aromatic amino a 100.0 7.1E-42 2.4E-46 336.3 23.9 341 48-433 26-392 (394)
81 1uu1_A Histidinol-phosphate am 100.0 1.1E-40 3.6E-45 320.9 26.2 316 47-433 18-334 (335)
82 3a2b_A Serine palmitoyltransfe 100.0 1.1E-37 3.8E-42 306.9 30.3 344 46-438 41-393 (398)
83 3tqx_A 2-amino-3-ketobutyrate 100.0 3.8E-35 1.3E-39 288.6 30.6 346 47-437 42-396 (399)
84 2dr1_A PH1308 protein, 386AA l 100.0 4.5E-34 1.5E-38 279.6 33.6 305 97-441 51-383 (386)
85 1fc4_A 2-amino-3-ketobutyrate 100.0 6.9E-35 2.4E-39 287.2 26.3 342 46-438 43-398 (401)
86 1vjo_A Alanine--glyoxylate ami 100.0 1.7E-34 5.7E-39 283.6 28.9 298 97-434 65-392 (393)
87 1eg5_A Aminotransferase; PLP-d 100.0 5.4E-35 1.9E-39 285.8 22.5 302 91-438 40-377 (384)
88 1bs0_A Protein (8-amino-7-oxon 100.0 4.2E-34 1.4E-38 279.9 26.5 335 47-433 38-383 (384)
89 1t3i_A Probable cysteine desul 100.0 4.6E-34 1.6E-38 282.7 27.1 341 48-439 27-415 (420)
90 1kmj_A Selenocysteine lyase; p 100.0 1.7E-33 5.7E-38 277.3 27.7 341 48-437 22-405 (406)
91 2bwn_A 5-aminolevulinate synth 100.0 2.4E-33 8.2E-38 276.2 26.0 306 90-436 86-399 (401)
92 3f9t_A TDC, L-tyrosine decarbo 100.0 6.7E-33 2.3E-37 271.9 28.4 303 96-435 66-396 (397)
93 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 5.3E-34 1.8E-38 277.6 20.1 338 48-437 7-370 (371)
94 2ch1_A 3-hydroxykynurenine tra 100.0 4.3E-33 1.5E-37 273.7 26.4 298 97-438 53-384 (396)
95 1elu_A L-cysteine/L-cystine C- 100.0 3.4E-34 1.2E-38 280.8 17.9 297 90-433 53-388 (390)
96 2z9v_A Aspartate aminotransfer 100.0 1.5E-32 5E-37 269.5 29.1 299 95-438 42-372 (392)
97 1svv_A Threonine aldolase; str 100.0 8E-33 2.7E-37 267.9 26.1 336 48-436 13-357 (359)
98 2w8t_A SPT, serine palmitoyltr 100.0 1.3E-32 4.5E-37 273.2 28.0 348 46-440 62-418 (427)
99 1jg8_A L-ALLO-threonine aldola 100.0 5.9E-33 2E-37 267.9 24.0 331 47-437 2-346 (347)
100 4eb5_A Probable cysteine desul 100.0 1.1E-32 3.8E-37 269.3 26.1 298 96-439 44-375 (382)
101 1e5e_A MGL, methionine gamma-l 100.0 2.7E-32 9.1E-37 268.8 28.5 287 89-438 54-396 (404)
102 2huf_A Alanine glyoxylate amin 100.0 3.6E-32 1.2E-36 266.9 28.9 300 95-439 52-385 (393)
103 3kki_A CAI-1 autoinducer synth 100.0 3E-32 1E-36 269.1 28.5 295 95-437 104-404 (409)
104 1iug_A Putative aspartate amin 100.0 9.4E-33 3.2E-37 266.7 24.0 293 95-437 34-348 (352)
105 4hvk_A Probable cysteine desul 100.0 1.6E-32 5.4E-37 267.8 25.7 298 98-440 42-376 (382)
106 1m32_A 2-aminoethylphosphonate 100.0 1.9E-32 6.4E-37 265.8 26.0 298 95-436 37-364 (366)
107 3zrp_A Serine-pyruvate aminotr 100.0 9.5E-32 3.3E-36 262.7 30.6 295 96-439 36-365 (384)
108 1sff_A 4-aminobutyrate aminotr 100.0 1E-32 3.6E-37 273.8 22.9 350 46-437 39-424 (426)
109 3nnk_A Ureidoglycine-glyoxylat 100.0 2.4E-31 8.4E-36 262.4 32.4 299 99-438 46-391 (411)
110 2yrr_A Aminotransferase, class 100.0 9.7E-32 3.3E-36 259.5 27.5 294 95-435 33-351 (353)
111 3lvm_A Cysteine desulfurase; s 100.0 2.8E-32 9.5E-37 270.4 23.9 345 46-439 19-401 (423)
112 2dkj_A Serine hydroxymethyltra 100.0 3.8E-32 1.3E-36 268.0 24.6 340 48-436 23-387 (407)
113 3cai_A Possible aminotransfera 100.0 8.2E-32 2.8E-36 265.6 26.8 294 95-432 69-404 (406)
114 3kgw_A Alanine-glyoxylate amin 100.0 1.6E-31 5.5E-36 261.9 27.4 300 97-440 58-391 (393)
115 2ez2_A Beta-tyrosinase, tyrosi 100.0 3.8E-31 1.3E-35 264.9 30.5 319 90-438 70-432 (456)
116 3isl_A Purine catabolism prote 100.0 1.2E-30 4E-35 258.0 33.4 300 98-438 43-391 (416)
117 1v72_A Aldolase; PLP-dependent 100.0 1.4E-31 4.8E-36 258.9 22.8 335 48-439 7-355 (356)
118 2eh6_A Acoat, acetylornithine 100.0 4.3E-32 1.5E-36 264.7 19.1 322 46-434 26-375 (375)
119 3i4j_A Aminotransferase, class 100.0 6.4E-31 2.2E-35 261.3 26.2 358 46-437 27-428 (430)
120 3f0h_A Aminotransferase; RER07 100.0 4.8E-30 1.7E-34 250.2 29.3 298 96-436 49-373 (376)
121 2ord_A Acoat, acetylornithine 100.0 2.7E-31 9.1E-36 261.3 19.7 286 99-435 82-395 (397)
122 2aeu_A Hypothetical protein MJ 100.0 2E-30 6.8E-35 252.8 25.7 299 98-438 57-372 (374)
123 2bkw_A Alanine-glyoxylate amin 100.0 2.1E-30 7.1E-35 253.4 25.7 297 96-436 39-383 (385)
124 3vax_A Putative uncharacterize 100.0 5.2E-32 1.8E-36 266.4 13.3 295 99-436 63-399 (400)
125 4adb_A Succinylornithine trans 100.0 3.6E-30 1.2E-34 253.8 26.5 334 45-439 36-402 (406)
126 2eo5_A 419AA long hypothetical 100.0 5.7E-30 1.9E-34 253.6 27.0 338 46-436 40-417 (419)
127 3ruy_A Ornithine aminotransfer 100.0 1.3E-30 4.5E-35 255.8 21.8 325 45-434 33-391 (392)
128 3a9z_A Selenocysteine lyase; P 100.0 2.5E-30 8.6E-35 257.1 23.5 339 48-439 17-430 (432)
129 2pb2_A Acetylornithine/succiny 100.0 6.7E-30 2.3E-34 253.1 23.8 332 45-437 54-418 (420)
130 1vef_A Acetylornithine/acetyl- 100.0 1.8E-30 6.2E-35 255.1 18.9 326 46-434 43-394 (395)
131 4ffc_A 4-aminobutyrate aminotr 100.0 1.2E-29 4E-34 253.7 24.1 363 44-439 60-451 (453)
132 3nx3_A Acoat, acetylornithine 100.0 2.6E-29 8.9E-34 246.9 25.9 332 46-436 34-394 (395)
133 3pj0_A LMO0305 protein; struct 100.0 3.7E-30 1.3E-34 249.5 19.3 301 89-433 42-358 (359)
134 2oga_A Transaminase; PLP-depen 100.0 6.4E-30 2.2E-34 251.6 21.1 325 48-437 30-396 (399)
135 1zod_A DGD, 2,2-dialkylglycine 100.0 2.4E-29 8.2E-34 250.2 25.3 311 99-437 85-432 (433)
136 3lws_A Aromatic amino acid bet 100.0 5.9E-30 2E-34 247.9 20.2 324 53-434 15-356 (357)
137 3n5m_A Adenosylmethionine-8-am 100.0 4.5E-29 1.5E-33 249.6 27.0 356 44-435 45-450 (452)
138 3gju_A Putative aminotransfera 100.0 5.4E-29 1.8E-33 249.5 27.6 359 44-439 47-458 (460)
139 3ffr_A Phosphoserine aminotran 100.0 2.8E-29 9.6E-34 243.2 24.5 290 96-434 40-361 (362)
140 1wyu_B Glycine dehydrogenase s 100.0 3.6E-29 1.2E-33 251.6 25.0 303 94-436 102-440 (474)
141 3dxv_A Alpha-amino-epsilon-cap 100.0 6.4E-30 2.2E-34 254.8 19.2 353 45-437 40-425 (439)
142 1ax4_A Tryptophanase; tryptoph 100.0 8.6E-29 3E-33 248.6 27.5 322 90-438 71-442 (467)
143 3mad_A Sphingosine-1-phosphate 100.0 5.3E-29 1.8E-33 253.1 25.4 310 90-440 130-472 (514)
144 1mdo_A ARNB aminotransferase; 100.0 9.7E-29 3.3E-33 242.5 26.3 292 93-438 37-387 (393)
145 1b9h_A AHBA synthase, protein 100.0 1.9E-29 6.4E-34 247.2 21.0 298 90-436 33-387 (388)
146 2rfv_A Methionine gamma-lyase; 100.0 3.1E-28 1.1E-32 239.5 29.6 283 95-432 64-395 (398)
147 1s0a_A Adenosylmethionine-8-am 100.0 7.2E-29 2.5E-33 246.4 25.3 339 47-437 42-424 (429)
148 1w23_A Phosphoserine aminotran 100.0 1.4E-29 4.9E-34 245.3 19.2 288 96-436 45-359 (360)
149 4a6r_A Omega transaminase; tra 100.0 1.2E-28 4E-33 247.0 25.3 355 45-439 47-451 (459)
150 3l44_A Glutamate-1-semialdehyd 100.0 6.7E-29 2.3E-33 247.0 22.9 350 45-440 52-433 (434)
151 2po3_A 4-dehydrase; external a 100.0 8E-29 2.7E-33 245.7 23.4 327 52-439 20-388 (424)
152 1ibj_A CBL, cystathionine beta 100.0 1.5E-28 5.3E-33 245.3 24.6 295 89-436 125-461 (464)
153 3n0l_A Serine hydroxymethyltra 100.0 3.7E-28 1.3E-32 240.1 27.2 345 49-436 26-388 (417)
154 1qz9_A Kynureninase; kynurenin 100.0 6.7E-29 2.3E-33 245.5 21.7 283 96-437 72-402 (416)
155 2c0r_A PSAT, phosphoserine ami 100.0 9.7E-29 3.3E-33 239.9 21.7 288 96-437 46-361 (362)
156 3ecd_A Serine hydroxymethyltra 100.0 6.2E-28 2.1E-32 239.1 27.0 345 49-437 33-397 (425)
157 3mc6_A Sphingosine-1-phosphate 100.0 4.8E-29 1.7E-33 252.4 18.1 310 90-439 98-439 (497)
158 3dod_A Adenosylmethionine-8-am 100.0 3.1E-28 1.1E-32 243.2 23.2 353 44-439 40-445 (448)
159 3oks_A 4-aminobutyrate transam 100.0 3.8E-28 1.3E-32 242.6 23.5 358 44-436 57-450 (451)
160 1z7d_A Ornithine aminotransfer 100.0 6.8E-28 2.3E-32 239.6 24.7 334 45-440 62-432 (433)
161 2oat_A Ornithine aminotransfer 100.0 6.1E-28 2.1E-32 240.3 23.3 330 46-436 74-438 (439)
162 1rv3_A Serine hydroxymethyltra 100.0 1.8E-27 6E-32 239.6 26.6 344 49-436 45-430 (483)
163 3k28_A Glutamate-1-semialdehyd 100.0 7.7E-28 2.6E-32 239.0 23.6 342 44-437 49-427 (429)
164 3a8u_X Omega-amino acid--pyruv 100.0 2.1E-27 7.1E-32 237.3 26.5 344 46-436 48-446 (449)
165 3fq8_A Glutamate-1-semialdehyd 100.0 8.8E-28 3E-32 238.5 23.0 340 45-436 49-426 (427)
166 3ndn_A O-succinylhomoserine su 100.0 3.2E-27 1.1E-31 232.7 26.5 287 100-434 82-413 (414)
167 3tfu_A Adenosylmethionine-8-am 100.0 1.8E-27 6.2E-32 237.8 24.7 341 46-438 71-454 (457)
168 3gbx_A Serine hydroxymethyltra 100.0 7.9E-28 2.7E-32 237.9 21.4 343 49-436 31-395 (420)
169 1cs1_A CGS, protein (cystathio 100.0 1.2E-26 4.1E-31 227.2 29.3 285 90-437 48-383 (386)
170 3dr4_A Putative perosamine syn 100.0 6.8E-28 2.3E-32 236.4 19.7 324 46-434 20-390 (391)
171 3cog_A Cystathionine gamma-lya 100.0 5.4E-27 1.8E-31 230.7 26.2 192 90-324 63-262 (403)
172 2vi8_A Serine hydroxymethyltra 100.0 2.4E-27 8.1E-32 233.5 23.1 302 97-437 67-387 (405)
173 3qhx_A Cystathionine gamma-syn 100.0 2E-26 6.7E-31 226.0 28.4 282 96-434 67-391 (392)
174 3e9k_A Kynureninase; kynurenin 100.0 8.4E-28 2.9E-32 241.3 18.7 292 98-438 114-462 (465)
175 3uwc_A Nucleotide-sugar aminot 100.0 1.7E-27 5.9E-32 232.0 20.3 322 49-437 7-371 (374)
176 2fyf_A PSAT, phosphoserine ami 100.0 7.7E-27 2.6E-31 229.5 25.1 284 99-436 78-397 (398)
177 3i5t_A Aminotransferase; pyrid 100.0 6.4E-27 2.2E-31 235.1 24.7 352 44-439 50-456 (476)
178 2epj_A Glutamate-1-semialdehyd 100.0 1.2E-26 4E-31 230.9 24.8 336 45-438 53-432 (434)
179 3h7f_A Serine hydroxymethyltra 100.0 2.7E-26 9.2E-31 229.0 27.2 339 49-437 46-414 (447)
180 2cy8_A D-phgat, D-phenylglycin 100.0 1.3E-26 4.5E-31 231.8 24.6 333 46-439 55-437 (453)
181 2dgk_A GAD-beta, GADB, glutama 100.0 2.5E-26 8.6E-31 229.6 26.6 316 90-440 72-437 (452)
182 2e7u_A Glutamate-1-semialdehyd 100.0 7.6E-27 2.6E-31 231.5 22.6 332 45-434 49-424 (424)
183 1pff_A Methionine gamma-lyase; 99.9 1.2E-26 4E-31 222.4 22.8 277 99-432 2-329 (331)
184 3hmu_A Aminotransferase, class 99.9 1.7E-26 5.9E-31 231.6 24.3 352 44-438 51-453 (472)
185 2c81_A Glutamine-2-deoxy-scyll 99.9 3.1E-26 1.1E-30 226.7 25.6 302 91-437 34-414 (418)
186 2fnu_A Aminotransferase; prote 99.9 7.3E-26 2.5E-30 220.4 27.3 290 94-437 31-372 (375)
187 2oqx_A Tryptophanase; lyase, p 99.9 6.3E-27 2.2E-31 235.0 20.1 319 90-438 69-443 (467)
188 1gc0_A Methionine gamma-lyase; 99.9 9.9E-26 3.4E-30 221.6 27.4 280 95-432 65-396 (398)
189 1n8p_A Cystathionine gamma-lya 99.9 3.1E-26 1E-30 224.6 23.1 282 95-432 55-390 (393)
190 1qgn_A Protein (cystathionine 99.9 3E-25 1E-29 219.9 29.8 283 96-436 115-444 (445)
191 1o69_A Aminotransferase; struc 99.9 5.1E-25 1.7E-29 216.2 29.7 302 91-436 26-386 (394)
192 4e77_A Glutamate-1-semialdehyd 99.9 4.2E-26 1.4E-30 226.5 22.2 345 44-436 49-428 (429)
193 3nyt_A Aminotransferase WBPE; 99.9 6.2E-26 2.1E-30 220.6 22.5 289 90-433 30-360 (367)
194 2cb1_A O-acetyl homoserine sul 99.9 7.6E-25 2.6E-29 216.2 30.2 283 90-431 49-410 (412)
195 3acz_A Methionine gamma-lyase; 99.9 6.4E-25 2.2E-29 215.1 29.1 279 95-435 59-387 (389)
196 2cjg_A L-lysine-epsilon aminot 99.9 8.7E-26 3E-30 225.4 23.0 297 99-437 101-448 (449)
197 3frk_A QDTB; aminotransferase, 99.9 1.8E-26 6.3E-31 224.8 17.0 296 91-437 32-368 (373)
198 2okj_A Glutamate decarboxylase 99.9 3.7E-25 1.3E-29 224.1 26.5 323 90-436 123-501 (504)
199 3ri6_A O-acetylhomoserine sulf 99.9 1.8E-25 6.1E-30 220.9 21.2 281 96-434 83-429 (430)
200 1js3_A DDC;, DOPA decarboxylas 99.9 9.6E-25 3.3E-29 220.2 26.1 321 90-439 104-476 (486)
201 3hbx_A GAD 1, glutamate decarb 99.9 5.9E-25 2E-29 222.1 24.3 317 91-440 87-447 (502)
202 2z67_A O-phosphoseryl-tRNA(SEC 99.9 7.6E-25 2.6E-29 219.0 24.7 301 97-434 131-455 (456)
203 3ke3_A Putative serine-pyruvat 99.9 7.6E-24 2.6E-28 206.7 30.4 302 97-438 33-377 (379)
204 2x3l_A ORN/Lys/Arg decarboxyla 99.9 2.4E-26 8.2E-31 229.0 12.5 287 93-437 55-353 (446)
205 3vp6_A Glutamate decarboxylase 99.9 4.9E-24 1.7E-28 215.8 28.7 325 89-436 125-504 (511)
206 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 4.6E-24 1.6E-28 212.3 24.8 293 91-435 58-434 (437)
207 2qma_A Diaminobutyrate-pyruvat 99.9 6.1E-24 2.1E-28 214.8 24.8 317 90-436 131-495 (497)
208 3nmy_A Xometc, cystathionine g 99.9 1.5E-23 5.2E-28 205.5 26.2 283 96-435 68-397 (400)
209 2jis_A Cysteine sulfinic acid 99.9 4.8E-23 1.7E-27 209.1 27.6 320 90-435 139-513 (515)
210 2fq6_A Cystathionine beta-lyas 99.9 1.5E-23 5.3E-28 206.3 22.1 283 96-431 83-412 (415)
211 4e1o_A HDC, histidine decarbox 99.9 5.7E-23 1.9E-27 206.6 25.6 323 89-438 108-479 (481)
212 3k40_A Aromatic-L-amino-acid d 99.9 5.7E-23 1.9E-27 206.2 23.5 322 90-439 104-473 (475)
213 3ju7_A Putative PLP-dependent 99.9 1.9E-22 6.6E-27 196.4 26.4 291 96-437 37-375 (377)
214 2a7v_A Serine hydroxymethyltra 99.9 2.4E-22 8.3E-27 200.6 27.1 302 98-436 99-440 (490)
215 1wyu_A Glycine dehydrogenase ( 99.9 3.7E-23 1.2E-27 205.8 20.6 291 94-434 103-437 (438)
216 3b8x_A WBDK, pyridoxamine 5-ph 99.9 3.6E-22 1.2E-26 195.5 26.4 288 91-430 30-389 (390)
217 3jzl_A Putative cystathionine 99.9 1.7E-22 5.7E-27 198.0 22.7 254 89-392 54-338 (409)
218 2ctz_A O-acetyl-L-homoserine s 99.9 2E-22 7E-27 199.3 23.1 281 97-434 60-420 (421)
219 3i16_A Aluminum resistance pro 99.9 1.6E-22 5.5E-27 198.8 21.6 255 90-392 69-355 (427)
220 3hvy_A Cystathionine beta-lyas 99.9 3.3E-22 1.1E-26 196.6 22.0 253 90-391 70-354 (427)
221 1ohv_A 4-aminobutyrate aminotr 99.9 1.5E-22 5.3E-27 202.9 19.9 347 44-436 59-470 (472)
222 2yky_A Beta-transaminase; tran 99.8 5.6E-25 1.9E-29 218.4 0.0 336 44-438 96-461 (465)
223 1c4k_A Protein (ornithine deca 99.9 3.9E-22 1.3E-26 207.7 19.4 311 96-438 174-567 (730)
224 3ht4_A Aluminum resistance pro 99.9 7.9E-21 2.7E-25 187.6 24.3 254 101-392 67-344 (431)
225 2vyc_A Biodegradative arginine 99.9 1.9E-20 6.4E-25 196.8 24.0 177 97-295 207-402 (755)
226 3n75_A LDC, lysine decarboxyla 99.8 5.3E-19 1.8E-23 182.7 17.0 175 97-295 197-383 (715)
227 3e77_A Phosphoserine aminotran 99.8 9.1E-18 3.1E-22 162.0 17.2 289 97-437 60-375 (377)
228 3m5u_A Phosphoserine aminotran 99.8 5.5E-17 1.9E-21 156.0 20.5 330 46-437 2-360 (361)
229 3qm2_A Phosphoserine aminotran 99.7 2.1E-17 7.2E-22 160.3 15.9 287 96-437 73-385 (386)
230 4ao9_A Beta-phenylalanine amin 99.7 2.1E-16 7.3E-21 155.8 22.1 280 120-438 143-447 (454)
231 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 7E-15 2.4E-19 141.6 28.5 301 120-441 134-465 (501)
232 3ou5_A Serine hydroxymethyltra 99.6 4.2E-14 1.4E-18 135.7 22.3 310 91-435 92-439 (490)
233 4atq_A 4-aminobutyrate transam 99.6 2.5E-14 8.6E-19 141.5 21.3 365 40-437 56-455 (456)
234 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 3.1E-12 1.1E-16 124.8 30.4 322 97-441 96-447 (450)
235 4e3q_A Pyruvate transaminase; 99.6 6.2E-13 2.1E-17 132.1 25.1 308 99-439 111-470 (473)
236 4a0g_A Adenosylmethionine-8-am 99.5 1.6E-13 5.6E-18 145.2 16.7 231 185-437 577-828 (831)
237 4fgs_A Probable dehydrogenase 83.1 5.3 0.00018 35.9 9.0 100 122-228 31-133 (273)
238 3rwb_A TPLDH, pyridoxal 4-dehy 77.1 12 0.0004 32.7 9.2 102 120-227 6-109 (247)
239 3tpc_A Short chain alcohol deh 75.4 17 0.00059 31.7 9.9 101 120-227 7-114 (257)
240 3gh5_A HEX1, beta-hexosaminida 75.1 7.8 0.00027 38.3 8.0 114 116-241 126-276 (525)
241 3h7a_A Short chain dehydrogena 74.9 40 0.0014 29.3 12.2 100 120-227 7-112 (252)
242 4dqx_A Probable oxidoreductase 74.5 17 0.0006 32.3 9.8 101 120-227 27-130 (277)
243 4g81_D Putative hexonate dehyd 73.5 29 0.00098 30.6 10.7 101 121-228 10-116 (255)
244 4e6p_A Probable sorbitol dehyd 73.3 21 0.00072 31.3 9.9 102 120-227 8-111 (259)
245 2o23_A HADH2 protein; HSD17B10 72.4 38 0.0013 29.4 11.5 82 120-207 12-93 (265)
246 3ppi_A 3-hydroxyacyl-COA dehyd 71.9 25 0.00085 31.2 10.2 100 121-227 31-138 (281)
247 3m1a_A Putative dehydrogenase; 70.9 18 0.00063 32.0 9.1 99 122-227 7-108 (281)
248 4eso_A Putative oxidoreductase 70.8 22 0.00076 31.1 9.4 101 120-227 8-111 (255)
249 3l6e_A Oxidoreductase, short-c 70.4 20 0.00067 31.0 8.9 100 122-227 5-106 (235)
250 3gem_A Short chain dehydrogena 70.2 28 0.00096 30.6 10.0 99 120-227 27-127 (260)
251 3gvc_A Oxidoreductase, probabl 70.2 17 0.00059 32.3 8.7 100 121-227 30-132 (277)
252 2gjx_A Beta-hexosaminidase alp 69.6 12 0.00042 36.8 8.0 108 116-238 96-233 (507)
253 3ged_A Short-chain dehydrogena 69.3 24 0.00083 30.9 9.2 99 122-228 4-105 (247)
254 3grp_A 3-oxoacyl-(acyl carrier 69.0 20 0.00068 31.7 8.8 101 120-227 27-130 (266)
255 3pxx_A Carveol dehydrogenase; 68.9 18 0.00061 32.2 8.5 100 121-227 11-126 (287)
256 3n74_A 3-ketoacyl-(acyl-carrie 68.7 28 0.00095 30.4 9.7 102 120-227 9-113 (261)
257 3tzq_B Short-chain type dehydr 68.7 37 0.0013 29.9 10.6 101 120-227 11-116 (271)
258 3sc4_A Short chain dehydrogena 68.4 63 0.0022 28.6 12.1 102 120-227 9-122 (285)
259 3lyl_A 3-oxoacyl-(acyl-carrier 68.3 38 0.0013 29.2 10.4 101 121-227 6-111 (247)
260 2ew8_A (S)-1-phenylethanol deh 68.0 43 0.0015 28.9 10.7 100 121-227 8-111 (249)
261 1jak_A Beta-N-acetylhexosamini 67.7 16 0.00054 36.1 8.3 26 213-238 224-249 (512)
262 4ibo_A Gluconate dehydrogenase 64.8 41 0.0014 29.6 10.0 102 120-227 26-132 (271)
263 3rih_A Short chain dehydrogena 64.2 58 0.002 29.1 11.0 103 120-228 41-149 (293)
264 3op4_A 3-oxoacyl-[acyl-carrier 64.1 28 0.00095 30.2 8.6 101 120-227 9-112 (248)
265 4fc7_A Peroxisomal 2,4-dienoyl 63.9 47 0.0016 29.3 10.3 101 121-227 28-134 (277)
266 1now_A Beta-hexosaminidase bet 62.6 12 0.00042 36.8 6.4 107 116-238 102-238 (507)
267 3ksu_A 3-oxoacyl-acyl carrier 62.3 51 0.0018 28.8 10.1 102 119-227 10-120 (262)
268 1vl8_A Gluconate 5-dehydrogena 61.5 49 0.0017 29.0 9.9 102 120-227 21-128 (267)
269 1hxh_A 3BETA/17BETA-hydroxyste 61.5 46 0.0016 28.9 9.6 100 121-227 7-109 (253)
270 3tfo_A Putative 3-oxoacyl-(acy 61.4 52 0.0018 28.9 10.0 99 122-227 6-110 (264)
271 3t7c_A Carveol dehydrogenase; 60.7 58 0.002 29.1 10.4 101 120-227 28-147 (299)
272 3sju_A Keto reductase; short-c 60.4 42 0.0014 29.7 9.3 99 122-227 26-130 (279)
273 4fn4_A Short chain dehydrogena 60.2 59 0.002 28.5 10.0 100 122-228 9-115 (254)
274 4gkb_A 3-oxoacyl-[acyl-carrier 60.0 89 0.0031 27.4 11.2 100 122-228 8-112 (258)
275 3e03_A Short chain dehydrogena 59.5 91 0.0031 27.3 12.3 102 119-227 5-119 (274)
276 4dyv_A Short-chain dehydrogena 59.4 38 0.0013 30.0 8.7 98 123-227 31-132 (272)
277 3rkr_A Short chain oxidoreduct 59.3 61 0.0021 28.2 10.1 101 121-227 30-136 (262)
278 3gaf_A 7-alpha-hydroxysteroid 59.0 47 0.0016 28.9 9.2 101 120-227 12-117 (256)
279 1uls_A Putative 3-oxoacyl-acyl 59.0 53 0.0018 28.3 9.5 98 121-227 6-106 (245)
280 3kvo_A Hydroxysteroid dehydrog 58.8 1.1E+02 0.0038 28.1 13.1 100 121-227 46-158 (346)
281 3ucx_A Short chain dehydrogena 58.6 60 0.0021 28.3 9.9 101 120-227 11-118 (264)
282 2c07_A 3-oxoacyl-(acyl-carrier 58.5 96 0.0033 27.3 11.8 101 121-227 45-150 (285)
283 1hdc_A 3-alpha, 20 beta-hydrox 58.2 50 0.0017 28.6 9.3 100 121-227 6-108 (254)
284 3edm_A Short chain dehydrogena 58.2 87 0.003 27.2 10.9 101 120-227 8-116 (259)
285 3uve_A Carveol dehydrogenase ( 58.1 36 0.0012 30.2 8.4 101 120-227 11-134 (286)
286 3v2h_A D-beta-hydroxybutyrate 58.1 96 0.0033 27.3 11.3 102 120-227 25-133 (281)
287 3tjr_A Short chain dehydrogena 57.9 56 0.0019 29.3 9.7 101 120-227 31-137 (301)
288 3sx2_A Putative 3-ketoacyl-(ac 57.8 37 0.0013 30.0 8.4 99 120-227 13-127 (278)
289 2jah_A Clavulanic acid dehydro 57.7 67 0.0023 27.6 10.0 101 121-227 8-113 (247)
290 4dmm_A 3-oxoacyl-[acyl-carrier 57.6 36 0.0012 30.0 8.2 101 120-227 28-135 (269)
291 1geg_A Acetoin reductase; SDR 57.5 63 0.0022 27.9 9.8 98 123-227 5-108 (256)
292 3r1i_A Short-chain type dehydr 57.4 82 0.0028 27.7 10.7 102 119-227 31-138 (276)
293 3tsc_A Putative oxidoreductase 57.0 42 0.0014 29.6 8.7 100 121-227 12-130 (277)
294 3qiv_A Short-chain dehydrogena 56.9 67 0.0023 27.6 9.9 101 120-227 9-118 (253)
295 3l77_A Short-chain alcohol deh 56.8 34 0.0012 29.2 7.8 100 122-227 4-109 (235)
296 3gdg_A Probable NADP-dependent 56.7 96 0.0033 26.9 11.0 104 119-227 19-130 (267)
297 3is3_A 17BETA-hydroxysteroid d 56.5 34 0.0011 30.1 7.9 100 121-227 19-125 (270)
298 1x1t_A D(-)-3-hydroxybutyrate 55.7 75 0.0026 27.5 10.0 100 122-227 6-112 (260)
299 2rhc_B Actinorhodin polyketide 55.5 84 0.0029 27.6 10.4 100 121-227 23-128 (277)
300 4imr_A 3-oxoacyl-(acyl-carrier 55.4 1E+02 0.0035 27.1 10.9 101 119-227 32-138 (275)
301 1yb1_A 17-beta-hydroxysteroid 55.4 71 0.0024 27.9 9.9 83 119-207 30-115 (272)
302 3ezl_A Acetoacetyl-COA reducta 55.2 62 0.0021 27.9 9.4 99 122-227 15-120 (256)
303 3ijr_A Oxidoreductase, short c 55.2 91 0.0031 27.7 10.6 101 120-227 47-155 (291)
304 1y80_A Predicted cobalamin bin 55.1 86 0.0029 26.3 9.9 60 164-239 114-177 (210)
305 3s55_A Putative short-chain de 54.5 86 0.0029 27.5 10.3 101 120-227 10-128 (281)
306 1iv0_A Hypothetical protein; r 54.5 22 0.00074 26.2 5.1 58 181-243 37-96 (98)
307 1w6u_A 2,4-dienoyl-COA reducta 54.5 86 0.0029 27.8 10.4 102 121-227 27-133 (302)
308 3v2g_A 3-oxoacyl-[acyl-carrier 54.3 49 0.0017 29.1 8.6 103 118-227 29-138 (271)
309 3dii_A Short-chain dehydrogena 54.3 51 0.0017 28.5 8.6 97 123-227 5-104 (247)
310 1c7s_A Beta-N-acetylhexosamini 54.1 15 0.00053 38.5 5.7 119 118-238 266-418 (858)
311 3ai3_A NADPH-sorbose reductase 53.9 90 0.0031 27.0 10.3 102 120-227 7-114 (263)
312 3lf2_A Short chain oxidoreduct 53.7 93 0.0032 27.1 10.3 104 119-228 7-117 (265)
313 3oid_A Enoyl-[acyl-carrier-pro 53.4 68 0.0023 27.9 9.3 99 122-227 6-111 (258)
314 3qlj_A Short chain dehydrogena 53.3 53 0.0018 29.7 8.9 99 122-227 29-143 (322)
315 1nff_A Putative oxidoreductase 53.2 78 0.0027 27.5 9.7 100 121-227 8-110 (260)
316 3pgx_A Carveol dehydrogenase; 52.8 50 0.0017 29.1 8.4 101 120-227 15-134 (280)
317 3imf_A Short chain dehydrogena 52.7 77 0.0026 27.5 9.5 102 121-228 7-113 (257)
318 3o38_A Short chain dehydrogena 52.6 65 0.0022 28.0 9.1 102 120-227 22-130 (266)
319 2cfc_A 2-(R)-hydroxypropyl-COM 52.2 58 0.002 27.9 8.6 80 123-207 5-87 (250)
320 3oec_A Carveol dehydrogenase ( 52.0 53 0.0018 29.7 8.6 100 121-227 47-164 (317)
321 4iin_A 3-ketoacyl-acyl carrier 51.9 1.1E+02 0.0037 26.7 10.5 104 118-227 27-136 (271)
322 3awd_A GOX2181, putative polyo 51.8 1E+02 0.0034 26.5 10.2 102 120-227 13-120 (260)
323 4egf_A L-xylulose reductase; s 51.7 68 0.0023 28.0 9.1 102 121-227 21-127 (266)
324 2yxg_A DHDPS, dihydrodipicolin 51.4 65 0.0022 28.8 8.9 97 98-226 52-151 (289)
325 3osu_A 3-oxoacyl-[acyl-carrier 51.4 60 0.002 27.9 8.5 99 122-227 6-111 (246)
326 2a4k_A 3-oxoacyl-[acyl carrier 51.4 61 0.0021 28.3 8.7 100 121-227 7-109 (263)
327 3a28_C L-2.3-butanediol dehydr 51.3 66 0.0022 27.9 8.9 98 123-227 5-110 (258)
328 3zv4_A CIS-2,3-dihydrobiphenyl 50.8 56 0.0019 28.9 8.4 83 120-209 5-87 (281)
329 1ae1_A Tropinone reductase-I; 50.6 1.3E+02 0.0043 26.3 10.8 101 120-227 21-128 (273)
330 2wkj_A N-acetylneuraminate lya 50.6 72 0.0025 28.8 9.1 108 99-241 64-175 (303)
331 1iy8_A Levodione reductase; ox 50.5 90 0.0031 27.1 9.7 101 121-227 14-122 (267)
332 2vc6_A MOSA, dihydrodipicolina 50.5 84 0.0029 28.1 9.5 108 98-239 52-162 (292)
333 2pnf_A 3-oxoacyl-[acyl-carrier 50.1 1.1E+02 0.0039 25.8 10.3 103 120-227 7-114 (248)
334 2ehh_A DHDPS, dihydrodipicolin 50.0 86 0.0029 28.1 9.5 96 99-226 53-151 (294)
335 3ak4_A NADH-dependent quinucli 49.8 81 0.0028 27.3 9.2 101 120-227 12-115 (263)
336 4b79_A PA4098, probable short- 49.1 74 0.0025 27.7 8.6 93 122-228 13-106 (242)
337 2wsb_A Galactitol dehydrogenas 48.6 1E+02 0.0035 26.3 9.7 101 120-227 11-114 (254)
338 3v8b_A Putative dehydrogenase, 48.6 1E+02 0.0036 27.1 9.9 102 120-227 28-135 (283)
339 2uvd_A 3-oxoacyl-(acyl-carrier 48.3 98 0.0033 26.5 9.5 99 122-227 6-111 (246)
340 1h5q_A NADP-dependent mannitol 48.3 1.3E+02 0.0045 25.8 11.3 100 122-227 16-121 (265)
341 2q2v_A Beta-D-hydroxybutyrate 48.0 1.3E+02 0.0045 25.8 10.9 99 122-227 6-108 (255)
342 1xky_A Dihydrodipicolinate syn 47.9 76 0.0026 28.6 8.8 107 99-241 65-175 (301)
343 3nyw_A Putative oxidoreductase 47.9 69 0.0024 27.7 8.4 101 121-227 8-115 (250)
344 1f6k_A N-acetylneuraminate lya 47.8 85 0.0029 28.1 9.1 107 99-240 57-166 (293)
345 3rd5_A Mypaa.01249.C; ssgcid, 47.6 44 0.0015 29.7 7.2 68 120-193 16-83 (291)
346 2rfg_A Dihydrodipicolinate syn 47.4 68 0.0023 28.9 8.4 107 99-240 53-162 (297)
347 3u9l_A 3-oxoacyl-[acyl-carrier 47.4 97 0.0033 28.1 9.6 99 122-227 7-116 (324)
348 2r8w_A AGR_C_1641P; APC7498, d 47.3 58 0.002 29.9 8.0 90 122-241 105-197 (332)
349 3cxt_A Dehydrogenase with diff 46.9 1.1E+02 0.0038 27.1 9.8 101 120-227 34-140 (291)
350 2ae2_A Protein (tropinone redu 46.8 1.4E+02 0.0048 25.7 10.8 101 120-227 9-116 (260)
351 1fmc_A 7 alpha-hydroxysteroid 46.8 1.4E+02 0.0046 25.5 10.5 102 120-227 11-116 (255)
352 1vhx_A Putative holliday junct 46.5 40 0.0014 27.0 5.9 59 180-243 40-101 (150)
353 1zem_A Xylitol dehydrogenase; 46.0 1.2E+02 0.0042 26.2 9.8 100 121-227 8-114 (262)
354 1zk4_A R-specific alcohol dehy 45.9 1.2E+02 0.004 25.9 9.6 101 121-227 7-111 (251)
355 3u5t_A 3-oxoacyl-[acyl-carrier 45.9 1.4E+02 0.0047 26.0 10.1 100 121-227 28-134 (267)
356 3ftp_A 3-oxoacyl-[acyl-carrier 45.6 98 0.0033 27.1 9.1 100 121-227 29-134 (270)
357 3i1j_A Oxidoreductase, short c 45.0 1.4E+02 0.0048 25.3 10.0 101 121-227 15-124 (247)
358 2b4q_A Rhamnolipids biosynthes 44.8 1.3E+02 0.0046 26.3 9.9 100 121-227 30-134 (276)
359 3pk0_A Short-chain dehydrogena 44.8 1.3E+02 0.0044 26.0 9.8 102 120-227 10-117 (262)
360 1o5k_A DHDPS, dihydrodipicolin 44.7 74 0.0025 28.8 8.2 110 98-241 64-176 (306)
361 3afn_B Carbonyl reductase; alp 44.6 1.5E+02 0.005 25.3 11.3 102 121-227 8-115 (258)
362 3ek2_A Enoyl-(acyl-carrier-pro 44.6 1.1E+02 0.0036 26.5 9.2 101 119-227 13-126 (271)
363 3rjz_A N-type ATP pyrophosphat 44.4 96 0.0033 26.9 8.4 100 122-237 7-120 (237)
364 2ojp_A DHDPS, dihydrodipicolin 43.7 81 0.0028 28.2 8.3 96 99-227 54-153 (292)
365 4a29_A Engineered retro-aldol 43.7 44 0.0015 29.4 6.1 81 146-242 81-161 (258)
366 3r3s_A Oxidoreductase; structu 43.6 1.2E+02 0.004 27.0 9.4 102 120-228 49-159 (294)
367 2x9g_A PTR1, pteridine reducta 43.5 1E+02 0.0034 27.2 9.0 82 122-209 25-114 (288)
368 3tox_A Short chain dehydrogena 43.1 1.3E+02 0.0044 26.5 9.6 101 121-227 9-115 (280)
369 2bd0_A Sepiapterin reductase; 42.9 1.3E+02 0.0045 25.4 9.4 100 123-227 5-115 (244)
370 3ioy_A Short-chain dehydrogena 42.6 1.1E+02 0.0039 27.5 9.2 102 121-228 9-117 (319)
371 3ic5_A Putative saccharopine d 41.7 70 0.0024 23.3 6.5 90 122-237 7-97 (118)
372 1edo_A Beta-keto acyl carrier 41.5 1.6E+02 0.0055 24.8 10.2 99 123-227 4-108 (244)
373 1bqc_A Protein (beta-mannanase 41.2 61 0.0021 29.0 7.1 40 157-197 37-77 (302)
374 2z1n_A Dehydrogenase; reductas 41.2 1.7E+02 0.0059 25.1 10.6 101 121-227 8-114 (260)
375 4e3z_A Putative oxidoreductase 41.1 1.6E+02 0.0055 25.5 9.9 98 123-227 29-134 (272)
376 3gk3_A Acetoacetyl-COA reducta 41.1 1.6E+02 0.0056 25.4 9.9 99 123-227 28-132 (269)
377 1xkq_A Short-chain reductase f 40.8 1.3E+02 0.0044 26.3 9.2 83 121-209 7-94 (280)
378 3guy_A Short-chain dehydrogena 40.5 65 0.0022 27.3 6.9 95 123-227 4-101 (230)
379 3nrc_A Enoyl-[acyl-carrier-pro 40.4 1.9E+02 0.0064 25.3 10.6 82 120-207 26-110 (280)
380 3qze_A DHDPS, dihydrodipicolin 40.0 1.4E+02 0.0047 27.1 9.3 89 122-240 94-185 (314)
381 1spx_A Short-chain reductase f 40.0 97 0.0033 27.1 8.2 82 122-209 8-94 (278)
382 1xhl_A Short-chain dehydrogena 39.5 1.3E+02 0.0046 26.6 9.1 101 121-227 27-137 (297)
383 2epl_X N-acetyl-beta-D-glucosa 39.3 1.5E+02 0.0051 29.9 10.1 110 116-238 41-163 (627)
384 3svt_A Short-chain type dehydr 39.2 1.9E+02 0.0066 25.1 10.3 102 120-227 11-121 (281)
385 1yxm_A Pecra, peroxisomal tran 39.0 1.7E+02 0.0059 25.7 9.9 101 121-227 19-129 (303)
386 1u83_A Phosphosulfolactate syn 38.9 1.4E+02 0.0047 26.5 8.5 109 100-241 82-193 (276)
387 1nu0_A Hypothetical protein YQ 38.7 50 0.0017 26.0 5.2 59 181-244 39-100 (138)
388 2ehd_A Oxidoreductase, oxidore 38.4 1.2E+02 0.0041 25.5 8.4 99 122-227 7-107 (234)
389 1yde_A Retinal dehydrogenase/r 38.4 1.6E+02 0.0055 25.6 9.4 100 120-227 9-112 (270)
390 3tl3_A Short-chain type dehydr 38.1 77 0.0026 27.4 7.1 96 121-227 10-112 (257)
391 3cpr_A Dihydrodipicolinate syn 37.9 1.3E+02 0.0043 27.2 8.6 108 98-241 68-179 (304)
392 3si9_A DHDPS, dihydrodipicolin 37.7 1.8E+02 0.0062 26.3 9.7 95 101-227 77-174 (315)
393 3asu_A Short-chain dehydrogena 37.7 86 0.0029 27.0 7.3 98 123-227 3-104 (248)
394 3rku_A Oxidoreductase YMR226C; 37.6 79 0.0027 28.1 7.2 102 121-228 34-146 (287)
395 3zu3_A Putative reductase YPO4 37.5 2.7E+02 0.0091 26.3 14.2 106 94-209 23-145 (405)
396 1ja9_A 4HNR, 1,3,6,8-tetrahydr 37.5 1.6E+02 0.0056 25.3 9.3 79 121-205 22-104 (274)
397 2hmc_A AGR_L_411P, dihydrodipi 37.0 1.1E+02 0.0037 28.2 8.1 90 122-241 94-188 (344)
398 2dtx_A Glucose 1-dehydrogenase 36.9 2.1E+02 0.007 24.8 9.9 93 120-227 8-103 (264)
399 1pjq_A CYSG, siroheme synthase 36.8 38 0.0013 32.7 5.2 96 118-241 10-106 (457)
400 3f1l_A Uncharacterized oxidore 36.6 2E+02 0.0069 24.6 10.7 103 121-227 13-122 (252)
401 1xq1_A Putative tropinone redu 36.5 1.7E+02 0.0059 25.1 9.3 101 121-227 15-121 (266)
402 3na8_A Putative dihydrodipicol 36.5 2E+02 0.0068 26.0 9.8 109 98-240 76-187 (315)
403 2yxb_A Coenzyme B12-dependent 36.3 99 0.0034 24.8 6.9 56 161-233 42-97 (161)
404 4iiu_A 3-oxoacyl-[acyl-carrier 36.3 1.7E+02 0.0058 25.3 9.2 99 122-227 28-133 (267)
405 1gee_A Glucose 1-dehydrogenase 36.3 2E+02 0.0069 24.5 9.7 101 121-227 8-114 (261)
406 3h5d_A DHDPS, dihydrodipicolin 36.2 2.4E+02 0.0083 25.4 10.4 95 101-227 62-160 (311)
407 3ctm_A Carbonyl reductase; alc 36.1 1.3E+02 0.0044 26.2 8.4 82 120-207 34-118 (279)
408 1qwg_A PSL synthase;, (2R)-pho 35.4 2.2E+02 0.0077 24.8 9.5 113 98-242 55-170 (251)
409 2ph3_A 3-oxoacyl-[acyl carrier 35.1 1.7E+02 0.006 24.5 8.9 99 123-227 4-109 (245)
410 3ruf_A WBGU; rossmann fold, UD 35.0 1.6E+02 0.0056 26.4 9.2 102 119-234 24-143 (351)
411 2bgk_A Rhizome secoisolaricire 35.0 2.2E+02 0.0075 24.5 9.9 80 121-206 17-98 (278)
412 2yl5_A Beta-N-acetylhexosamini 34.8 30 0.001 33.3 4.0 28 211-238 86-113 (442)
413 2nly_A BH1492 protein, diverge 34.4 1.2E+02 0.004 26.5 7.4 55 181-241 79-135 (245)
414 2v9d_A YAGE; dihydrodipicolini 34.4 1.5E+02 0.0053 27.1 8.7 95 101-227 86-184 (343)
415 2q5c_A NTRC family transcripti 34.4 2E+02 0.0068 23.9 13.0 94 97-213 13-107 (196)
416 3ozo_A N-acetylglucosaminidase 34.0 58 0.002 32.5 6.0 24 214-237 250-273 (572)
417 3qfe_A Putative dihydrodipicol 33.9 2.7E+02 0.0091 25.2 11.5 110 98-240 63-177 (318)
418 3m5v_A DHDPS, dihydrodipicolin 33.4 2.6E+02 0.009 24.9 10.9 107 101-241 62-172 (301)
419 3e48_A Putative nucleoside-dip 33.4 82 0.0028 27.6 6.6 102 123-243 3-108 (289)
420 3daq_A DHDPS, dihydrodipicolin 33.1 2.1E+02 0.0073 25.4 9.3 107 98-240 54-164 (292)
421 1i4n_A Indole-3-glycerol phosp 33.1 93 0.0032 27.2 6.6 24 216-239 133-156 (251)
422 2zcu_A Uncharacterized oxidore 33.0 1.5E+02 0.0052 25.6 8.4 93 123-234 2-96 (286)
423 3un1_A Probable oxidoreductase 32.9 2.2E+02 0.0075 24.5 9.3 95 120-227 28-125 (260)
424 2jl1_A Triphenylmethane reduct 32.9 1.5E+02 0.0051 25.7 8.3 95 123-234 3-99 (287)
425 3f9i_A 3-oxoacyl-[acyl-carrier 32.9 1.3E+02 0.0044 25.6 7.7 68 120-193 14-81 (249)
426 3kzv_A Uncharacterized oxidore 32.9 1.5E+02 0.0053 25.4 8.2 98 123-227 5-108 (254)
427 3flu_A DHDPS, dihydrodipicolin 32.8 1.9E+02 0.0066 25.8 9.0 108 98-240 59-169 (297)
428 1xg5_A ARPG836; short chain de 32.8 2.4E+02 0.0083 24.4 10.6 101 121-227 33-140 (279)
429 3eb2_A Putative dihydrodipicol 32.7 1.6E+02 0.0053 26.5 8.3 108 98-240 56-166 (300)
430 2qq5_A DHRS1, dehydrogenase/re 32.6 1.4E+02 0.0048 25.7 7.9 82 122-209 7-91 (260)
431 2zat_A Dehydrogenase/reductase 32.4 2.4E+02 0.0081 24.1 9.9 100 121-227 15-121 (260)
432 3qvo_A NMRA family protein; st 32.3 1.5E+02 0.0053 24.9 8.0 70 122-207 25-95 (236)
433 1mxh_A Pteridine reductase 2; 32.3 1.6E+02 0.0055 25.5 8.3 82 122-209 13-102 (276)
434 1oaa_A Sepiapterin reductase; 32.0 2.4E+02 0.0082 24.1 11.3 101 122-227 8-124 (259)
435 2hq1_A Glucose/ribitol dehydro 31.8 1.6E+02 0.0054 24.9 8.1 80 121-206 6-89 (247)
436 2pd6_A Estradiol 17-beta-dehyd 31.6 2E+02 0.0068 24.5 8.8 102 120-227 7-121 (264)
437 2yl6_A Beta-N-acetylhexosamini 31.4 29 0.001 33.3 3.3 28 211-238 83-110 (434)
438 2h7i_A Enoyl-[acyl-carrier-pro 31.2 2.2E+02 0.0076 24.5 9.1 82 121-209 8-95 (269)
439 3l21_A DHDPS, dihydrodipicolin 31.0 1.6E+02 0.0056 26.4 8.2 55 181-238 32-89 (304)
440 1g0o_A Trihydroxynaphthalene r 30.8 2.7E+02 0.0091 24.2 10.3 99 122-227 31-136 (283)
441 2nu8_A Succinyl-COA ligase [AD 30.7 60 0.0021 29.1 5.1 76 151-243 50-125 (288)
442 4dzz_A Plasmid partitioning pr 30.7 1.1E+02 0.0036 25.1 6.5 60 129-193 61-120 (206)
443 1wma_A Carbonyl reductase [NAD 30.6 2.1E+02 0.0073 24.4 8.9 80 122-207 6-89 (276)
444 3uf0_A Short-chain dehydrogena 30.4 2.7E+02 0.0092 24.2 10.5 101 118-227 29-135 (273)
445 3i4f_A 3-oxoacyl-[acyl-carrier 30.1 1.9E+02 0.0065 24.8 8.4 99 122-227 9-116 (264)
446 2d1y_A Hypothetical protein TT 30.0 2.6E+02 0.0089 23.9 10.7 97 121-227 7-106 (256)
447 3qp9_A Type I polyketide synth 29.8 2.1E+02 0.0071 28.0 9.3 103 118-227 248-371 (525)
448 3cpr_A Dihydrodipicolinate syn 29.8 2.1E+02 0.0071 25.7 8.6 54 181-237 33-89 (304)
449 3bzy_B ESCU; auto cleavage pro 29.6 29 0.00098 24.7 2.1 22 221-242 28-49 (83)
450 3t4x_A Oxidoreductase, short c 29.5 2.7E+02 0.0093 23.9 9.4 98 120-227 10-114 (267)
451 4h0c_A Phospholipase/carboxyle 28.8 2.5E+02 0.0084 23.2 8.8 107 118-230 97-209 (210)
452 4dry_A 3-oxoacyl-[acyl-carrier 28.7 2.5E+02 0.0084 24.6 9.0 100 122-227 35-141 (281)
453 3mje_A AMPHB; rossmann fold, o 28.6 3E+02 0.01 26.7 10.1 98 122-227 241-349 (496)
454 3tak_A DHDPS, dihydrodipicolin 28.6 2.1E+02 0.0071 25.5 8.4 37 200-240 127-163 (291)
455 3dhn_A NAD-dependent epimerase 28.0 2.5E+02 0.0086 23.1 8.6 70 121-207 5-74 (227)
456 1yo6_A Putative carbonyl reduc 28.0 2.7E+02 0.0091 23.3 10.6 100 122-227 5-111 (250)
457 3dfz_A SIRC, precorrin-2 dehyd 28.0 1.5E+02 0.0053 25.2 7.0 100 118-247 29-131 (223)
458 3ndz_A Endoglucanase D; cellot 27.6 1.1E+02 0.0036 28.2 6.4 28 336-363 247-274 (345)
459 3flu_A DHDPS, dihydrodipicolin 27.5 1.8E+02 0.006 26.1 7.7 55 181-238 24-81 (297)
460 3p19_A BFPVVD8, putative blue 27.5 3E+02 0.01 23.7 10.8 97 121-227 17-116 (266)
461 3icc_A Putative 3-oxoacyl-(acy 27.5 2.3E+02 0.0079 24.0 8.4 100 121-227 8-120 (255)
462 1iuk_A Hypothetical protein TT 27.4 1.4E+02 0.0047 23.2 6.2 21 223-243 107-127 (140)
463 2gjh_A Designed protein; oblig 27.4 1.1E+02 0.0039 18.9 4.3 28 410-437 3-30 (62)
464 1hjs_A Beta-1,4-galactanase; 4 27.4 1.4E+02 0.0047 27.3 7.0 37 209-245 49-85 (332)
465 3r6d_A NAD-dependent epimerase 27.3 1.8E+02 0.0063 24.0 7.6 63 123-192 8-72 (221)
466 3dqp_A Oxidoreductase YLBE; al 27.2 2.2E+02 0.0074 23.5 8.0 68 123-208 3-71 (219)
467 3i6i_A Putative leucoanthocyan 27.2 2.5E+02 0.0085 25.2 9.0 102 121-243 11-121 (346)
468 2wkj_A N-acetylneuraminate lya 27.2 2.1E+02 0.007 25.7 8.1 56 180-238 27-85 (303)
469 1tqj_A Ribulose-phosphate 3-ep 27.1 2.9E+02 0.0099 23.5 9.2 7 233-239 173-179 (230)
470 1ccw_A Protein (glutamate muta 27.0 2.2E+02 0.0074 22.0 7.3 55 161-232 27-81 (137)
471 3ecs_A Translation initiation 26.7 2.1E+02 0.0073 25.9 8.0 104 118-239 119-229 (315)
472 1vb5_A Translation initiation 26.4 2.9E+02 0.0098 24.4 8.8 117 98-238 93-216 (276)
473 3bk2_A RNAse J, metal dependen 26.4 1.5E+02 0.005 29.4 7.5 98 123-234 309-423 (562)
474 2yv1_A Succinyl-COA ligase [AD 26.4 55 0.0019 29.4 4.1 76 151-243 56-131 (294)
475 2qv5_A AGR_C_5032P, uncharacte 26.2 1.6E+02 0.0054 25.9 6.8 54 182-241 107-162 (261)
476 1ydn_A Hydroxymethylglutaryl-C 26.2 3.4E+02 0.012 24.0 9.8 55 185-239 120-176 (295)
477 3icg_A Endoglucanase D; cellul 25.9 1.1E+02 0.0038 29.9 6.5 24 220-243 86-109 (515)
478 1ry2_A Acetyl-coenzyme A synth 25.8 1.8E+02 0.0062 29.3 8.3 65 142-218 137-204 (663)
479 3dzv_A 4-methyl-5-(beta-hydrox 25.4 1.2E+02 0.0042 26.9 6.0 58 164-242 38-97 (273)
480 3tsm_A IGPS, indole-3-glycerol 25.3 1.4E+02 0.0046 26.5 6.3 50 179-240 127-176 (272)
481 1fob_A Beta-1,4-galactanase; B 25.3 79 0.0027 29.0 5.0 36 210-245 50-85 (334)
482 3vup_A Beta-1,4-mannanase; TIM 25.3 95 0.0033 27.6 5.6 23 219-241 89-111 (351)
483 1xky_A Dihydrodipicolinate syn 25.2 2E+02 0.0069 25.7 7.6 48 181-231 29-76 (301)
484 3tak_A DHDPS, dihydrodipicolin 24.9 1.9E+02 0.0066 25.7 7.4 55 181-238 18-75 (291)
485 3oig_A Enoyl-[acyl-carrier-pro 24.8 2.5E+02 0.0085 24.1 8.1 84 119-209 6-95 (266)
486 1tks_A 3,4-dihydroxy-2-butanon 24.7 1.3E+02 0.0043 25.4 5.6 39 197-238 156-194 (204)
487 2yv2_A Succinyl-COA synthetase 24.7 1.1E+02 0.0038 27.4 5.8 76 151-243 56-132 (297)
488 3b4u_A Dihydrodipicolinate syn 24.6 2E+02 0.0068 25.7 7.4 49 181-232 20-68 (294)
489 2nm0_A Probable 3-oxacyl-(acyl 24.5 3.2E+02 0.011 23.3 8.8 73 121-207 22-94 (253)
490 2jwk_A Protein TOLR; periplasm 24.4 1.6E+02 0.0054 19.5 5.4 47 182-234 27-73 (74)
491 2vt1_B Surface presentation of 24.4 40 0.0014 24.5 2.1 23 220-242 27-49 (93)
492 2nwq_A Probable short-chain de 24.3 1.9E+02 0.0067 25.1 7.3 99 122-227 23-127 (272)
493 1hdo_A Biliverdin IX beta redu 24.3 2.6E+02 0.0089 22.4 7.9 71 122-208 5-75 (206)
494 4gqr_A Pancreatic alpha-amylas 24.1 52 0.0018 31.7 3.7 27 218-244 75-101 (496)
495 2ojp_A DHDPS, dihydrodipicolin 23.9 2.1E+02 0.007 25.5 7.4 48 181-231 18-65 (292)
496 3dz1_A Dihydrodipicolinate syn 23.9 2E+02 0.0068 26.0 7.4 56 180-238 24-81 (313)
497 3h74_A Pyridoxal kinase; PSI-I 23.9 1.3E+02 0.0044 26.6 6.1 39 198-243 72-111 (282)
498 3s5o_A 4-hydroxy-2-oxoglutarat 23.7 2E+02 0.0068 25.9 7.3 55 181-238 31-88 (307)
499 2r8w_A AGR_C_1641P; APC7498, d 23.7 2.4E+02 0.0081 25.7 7.9 21 411-431 303-323 (332)
500 2zci_A Phosphoenolpyruvate car 23.7 3.7E+02 0.013 26.6 9.3 112 98-218 18-141 (610)
No 1
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=6.8e-59 Score=463.90 Aligned_cols=425 Identities=60% Similarity=1.059 Sum_probs=355.4
Q ss_pred cchhhhhcccCCCCcchhhhhhhhcCCCCCCCCCCceeeeecccccccHHHHHHHHHhCCCCcccC-CCCCCCCcccccC
Q 046900 14 LSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLEQQPEASTWG-KGAPGFRENALFQ 92 (442)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Y~ 92 (442)
+|+|+.+..++++++++.+|+.+.+++|+++.||.++|+|++++|+++.+.+.+++.+......+. +|....+....|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~p~~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~ 83 (435)
T 3piu_A 4 LSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQ 83 (435)
T ss_dssp --------------CTTHHHHHHHHSBCBTTTBTTSBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCC
T ss_pred cchhhhhcccccCcchhhHHHHhhcCCCCcccCCCCeEEeccccccccHHHHHHHHHhCccccccccccccccccccccC
Confidence 689999999999999999999999999999999999999999999999999999998876432211 1222223446799
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEE
Q 046900 93 DYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPI 172 (442)
Q Consensus 93 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v 172 (442)
+..|..+||+++|+++++.++.++++++++|++|+|+++++..++.+++++||.|+++.|+|..+...+....|++++.+
T Consensus 84 ~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~ 163 (435)
T 3piu_A 84 DYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPI 163 (435)
T ss_dssp CTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEE
T ss_pred CCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEe
Confidence 99999999999999999877766778899999999999999999999999999999999999999887762389999999
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+++++++|.+|++.|++++++....+.++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.|++..+
T Consensus 164 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~ 243 (435)
T 3piu_A 164 HCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSF 243 (435)
T ss_dssp ECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCC
T ss_pred eCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Confidence 99887789999999999998866666688999999999999999999999999999999999999999999998888777
Q ss_pred ccHHHHHhhhcCC----CCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhH
Q 046900 253 VSIAEILEARQYK----DSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFT 328 (442)
Q Consensus 253 ~s~~~~~~~~~~~----~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 328 (442)
.++..+..+.+.+ ..+++++++||||.||++|+|+||++++++.+.+.+++...++..+++.|.++.+++.+.+++
T Consensus 244 ~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 323 (435)
T 3piu_A 244 ISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLT 323 (435)
T ss_dssp CCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHH
T ss_pred cCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcChHHH
Confidence 7887776521000 037889999999999999999999999778888888877777778999999999999988877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCC
Q 046900 329 ENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEP 408 (442)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~ 408 (442)
+++++++++.++++++.+.+.|++.|+++..+.+|+|+|++++.........+..++++.|++++||.+.||+.|+...+
T Consensus 324 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 403 (435)
T 3piu_A 324 KNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEP 403 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCC
Confidence 77888999999999999999999999999999999999999986543333334678889998888999999999987778
Q ss_pred CEEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 409 GWFRVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 409 ~~iRls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
+++||+++..+++++++++++|++++++.+
T Consensus 404 ~~iRi~~~~~~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 404 GWFRVCFANLPERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp TEEEEECSSSCHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEeeCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999986689999999999999998764
No 2
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=3.2e-56 Score=443.66 Aligned_cols=424 Identities=57% Similarity=1.064 Sum_probs=346.0
Q ss_pred ccchhhhhcccCCCCcchhhhhhhhcCCCCCCCCCCceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccC
Q 046900 13 GLSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQ 92 (442)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 92 (442)
+||+|+.........+++..|+.+..++|++..++.++|+|+.++|+++++.+.+++...+......++...+.....|+
T Consensus 1 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 80 (428)
T 1iay_A 1 ILSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQ 80 (428)
T ss_dssp CCCTTGGGC-----CCTTHHHHHHHHSBCCSSSSTTSBEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCC
T ss_pred CcccccccccCcccccccchhhhhccCCCCcccCCCceeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCC
Confidence 48999988876667788999999999999998888899999999999998888888886653221111111112346799
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEE
Q 046900 93 DYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPI 172 (442)
Q Consensus 93 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v 172 (442)
++.|..+||+++|+++++.+|...++++++|++|+|+++++..++.+++++||.|+++.|+|..+...+....|++++.+
T Consensus 81 ~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v 160 (428)
T 1iay_A 81 DYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPI 160 (428)
T ss_dssp CTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEE
T ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEe
Confidence 88899999999999999887754447789999999999999999999999999999999999999875532379999999
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
|++.+++|.+|++.|++++++....+.++++|++++|+||||.+++.+++++|+++|+++|++||+||+|.++.|++..+
T Consensus 161 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~ 240 (428)
T 1iay_A 161 HCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQF 240 (428)
T ss_dssp CCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCC
T ss_pred ecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCc
Confidence 98766678899999999998654444578999999999999999999999999999999999999999999988876556
Q ss_pred ccHHHHHhhh--cCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHH
Q 046900 253 VSIAEILEAR--QYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTEN 330 (442)
Q Consensus 253 ~s~~~~~~~~--~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~ 330 (442)
.++..+.... .....++++++.||||.||++|+|+||++++++.+.+.+++...++.+++++|.++..++++.++.++
T Consensus 241 ~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 320 (428)
T 1iay_A 241 VSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDN 320 (428)
T ss_dssp CCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHH
T ss_pred cCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHHHHH
Confidence 6776665320 00013789999999999999999999999977777777776666677899999999999998776677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCE
Q 046900 331 YIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGW 410 (442)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~ 410 (442)
++++.++.++++++++.+.|++.|+++.++.+|+|+|++++............++++.|++++||.+.||..|+...+++
T Consensus 321 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~ 400 (428)
T 1iay_A 321 FLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGW 400 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCE
Confidence 88899999999999999999988988888878999999987532111122356788888877799999999887655689
Q ss_pred EEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 411 FRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 411 iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
+||+++..+++++++++++|++++++
T Consensus 401 iRis~~~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 401 FRVCFANMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp EEEECSSSCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 99999844899999999999998865
No 3
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=6.6e-51 Score=399.69 Aligned_cols=351 Identities=23% Similarity=0.416 Sum_probs=288.9
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.++++++ ++.+.+.+.+.... ....|++..|..+||+++++|+++.+| ..+++++|++
T Consensus 30 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~ 96 (385)
T 1b5p_A 30 GVDLVALTAGEPDFDTPEHVKEAARRALAQ-----------GKTKYAPPAGIPELREALAEKFRRENG--LSVTPEETIV 96 (385)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHHT-----------TCCSCCCTTCCHHHHHHHHHHHHHTTC--CCCCGGGEEE
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCChHHEEE
Confidence 356899999988764 34444444332110 124688888999999999999998766 4567899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++.+++++||.|++++|+|+.+...++. .|++++.++++++++|.+|+++|++++++ ++++|+
T Consensus 97 t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 169 (385)
T 1b5p_A 97 TVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRF-AGGVVVEVETLPEEGFVPDPERVRRAITP------RTKALV 169 (385)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHH-TTCEEEEEECCGGGTTCCCHHHHHTTCCT------TEEEEE
T ss_pred cCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH-cCCEEEEeecCcccCCCCCHHHHHHhcCC------CCEEEE
Confidence 99999999999999999999999999999999999885 89999999998656788999999988754 689999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++||||||.++|.+++++|+++|++||++||+||+|+++.+++ .+.++.++. .+++++++||||.+|++|+
T Consensus 170 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~-------~~~~i~~~s~SK~~~~~G~ 241 (385)
T 1b5p_A 170 VNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVA-------PEHTLTVNGAAKAFAMTGW 241 (385)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTC-------TTTEEEEEESTTTTTCGGG
T ss_pred EeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcC-------CCCEEEEEechhhcCCccc
Confidence 99999999999999999999999999999999999999988866 444554441 1679999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||+++ ++.+.+.+...... +.++.+.|.++.++++......+++++.++.++++++++.+.|++.|+++..++++
T Consensus 242 RiG~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 320 (385)
T 1b5p_A 242 RIGYACG-PKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGA 320 (385)
T ss_dssp CCEEEEC-CHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBT
T ss_pred ceEEEEe-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCee
Confidence 9999999 56666666554332 46788999999888875211135688889999999999999998888898889999
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|+|++++... .+..++++.|+++ ||.+.||+.|+. ++++|||++. +++++++++++|+++++
T Consensus 321 ~~~~~~~~~~~-----~~~~~l~~~l~~~-gv~v~~g~~f~~--~~~iRis~~~-~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 321 FYVLMDTSPIA-----PDEVRAAERLLEA-GVAVVPGTDFAA--FGHVRLSYAT-SEENLRKALERFARVLG 383 (385)
T ss_dssp TEEEEECTTTC-----SSHHHHHHHHHHT-TEECEESGGGTC--TTEEEEECCS-CHHHHHHHHHHGGGGC-
T ss_pred EEEEEecCCCC-----CCHHHHHHHHHHC-CeEEecccccCC--CCeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 99999987311 1367888888854 999999999864 6799999996 89999999999988764
No 4
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=6.7e-49 Score=397.72 Aligned_cols=349 Identities=19% Similarity=0.321 Sum_probs=288.5
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc-CCCCeEEEcCCCCcChHHhHhhhcC
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA-DPGDALLVPTPYYPGFDRDLRWRTG 166 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~~G 166 (442)
...|++..|..++|+++++++.+++| +++++++|++|+|+++++.+++.+++ ++||.|+++.|+|+.+...++. .|
T Consensus 127 ~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~-~g 203 (500)
T 3tcm_A 127 TGAYSHSQGIHGLRDAIASGIASRDG--FPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIAL-HG 203 (500)
T ss_dssp SSSCCCTTCCHHHHHHHHHHHHHHHS--SCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHH-TT
T ss_pred CCCcCCCcChHHHHHHHHHHHHhhcC--CCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHH-cC
Confidence 46799999999999999999998877 55789999999999999999999998 8999999999999999999985 99
Q ss_pred cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 167 IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 167 ~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
++++.++++++++|.+|++.|++++++...++.++++|+++||+||||.++|.+++++|+++|+++++++|+||+|+++.
T Consensus 204 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~ 283 (500)
T 3tcm_A 204 GALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENI 283 (500)
T ss_dssp CEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred CEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccc
Confidence 99999999988889999999999999876666688999999999999999999999999999999999999999999999
Q ss_pred CCC-CCcccHHHHHhhhcC-CCCCcEEEEecCcccC-CCCCceeEEEeec--CHHHHHHHHHccc-cCCCcHHHHHHHHH
Q 046900 247 FSS-SEFVSIAEILEARQY-KDSERVHIVYSLSKDL-GLPGFRVGTIYSY--NDKVVTTARRMSS-FTLISSQTQYLLAS 320 (442)
Q Consensus 247 ~~~-~~~~s~~~~~~~~~~-~~~~~vi~~~S~SK~~-g~~G~RiG~i~~~--~~~~~~~~~~~~~-~~~~s~~~q~~~~~ 320 (442)
|++ ..+.++..+..+.+. ....++++++||||.| |++|+|+||+++. ++.+.+.+.+... .+..+.+.|.++..
T Consensus 284 ~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~ 363 (500)
T 3tcm_A 284 YVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASL 363 (500)
T ss_dssp CCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred cCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhcccCCCHHHHHHHHH
Confidence 864 467788776554211 1234689999999999 8999999999872 4455555554433 45678899999999
Q ss_pred HhcCch-------hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCCccc------ccChhhHHHHH
Q 046900 321 MLSNKK-------FTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSPLLE------EQTREGELALW 386 (442)
Q Consensus 321 ~l~~~~-------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~l~ 386 (442)
++.... ...+++.++++.++++++++.+.|++. |+++.++++|+|+|+++..... ..+..+...++
T Consensus 364 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~ 443 (500)
T 3tcm_A 364 VMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYA 443 (500)
T ss_dssp HHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHH
T ss_pred HhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHH
Confidence 987532 124557788899999999999999998 9999999999999966542110 00111234455
Q ss_pred HHHHHcCcEEEeCCCCCCC-CCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 387 DSMLHEVKLNISPGSSCHC-SEPGWFRVCFANMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 387 ~~l~~~~gi~v~pg~~f~~-~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
..+++++||.+.||+.|+. .+.++||++++. +++++++++++|++++++..++
T Consensus 444 ~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~-~~e~i~~~i~~l~~~~~~~~~~ 497 (500)
T 3tcm_A 444 LRLLESTGIVVVPGSGFGQVPGTWHFRCTILP-QEDKIPAVISRFTVFHEAFMSE 497 (500)
T ss_dssp HHHHHHHCEECEESTTTCCCTTCCBEEEESCS-CTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEEeCcccCCCCCCCEEEEEECC-CHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777999999999985 456789999994 8999999999999999887654
No 5
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.1e-48 Score=391.08 Aligned_cols=361 Identities=19% Similarity=0.320 Sum_probs=294.6
Q ss_pred Cceeeeeccccc---ccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 48 SGVIQMGLAENQ---VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 48 ~~~i~l~~~~n~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
+++|+|+.+.+. ++++.+.+.+.+...... ....+|++..|..+||+++++++.+.+| .+ ++++|+
T Consensus 76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~--------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~-~~~~v~ 144 (448)
T 3aow_A 76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEKYA--------DKALQYGTTKGFTPLRETLMKWLGKRYG--IS-QDNDIM 144 (448)
T ss_dssp SSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSH--------HHHHSCCCTTCCHHHHHHHHHHHHHHHC--CC-TTSEEE
T ss_pred CCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhh--------HHHhCCCCCCCcHHHHHHHHHHHHHhcC--cC-ChhhEE
Confidence 368999877543 356666655544321100 0135798888999999999999977766 33 789999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++.+++++++++||.|+++.|+|..+...++. .|++++.+|++++ .+|++.|++.++.....+.++++|
T Consensus 145 ~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~---g~d~~~L~~~l~~~~~~~~~~k~v 220 (448)
T 3aow_A 145 ITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNF-YEPQYIQIPLDDE---GMKVEILEEKLKELKSQGKKVKVV 220 (448)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHT-TCCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEE
T ss_pred EeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHH-cCCEEEEeccCCC---CCCHHHHHHHHhhhhccCCCCeEE
Confidence 999999999999999999999999999999999999885 8999999999764 389999999987221122368887
Q ss_pred -EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 205 -LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 205 -~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
++++|+||||.+++.+++++|+++|++||++||+||+|+++.+++..+.++.++.. .+++++++||||.++ +
T Consensus 221 ~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~------~~~vi~~~S~SK~~~-~ 293 (448)
T 3aow_A 221 YTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDN------EGRVIYLGTFSKILA-P 293 (448)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCT------TSCEEEEEESTTTTC-G
T ss_pred EECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCC------CCCEEEEccchhhcc-c
Confidence 46899999999999999999999999999999999999999987765566665533 378999999999999 9
Q ss_pred CceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC---CCeee
Q 046900 284 GFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA---GIECL 358 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~ 358 (442)
|+|+||++++ +.+.+.+..... .+..++++|.++.++|+...+ .+++++.++.++++++.+.+.|++. |+++.
T Consensus 294 GlriG~v~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~ 371 (448)
T 3aow_A 294 GFRIGWMVGD-PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYL-EKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWT 371 (448)
T ss_dssp GGCCEEEEEC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEC
T ss_pred cccEEEEEeC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Confidence 9999999994 666666654332 245688999999999987643 6788999999999999999999875 78888
Q ss_pred cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC--CCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 359 KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS--EPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 359 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~--~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
.|.+|+|+|++++... +..++++.|+++ ||.+.||+.|+.. .++++||+++..+++++++++++|++++++
T Consensus 372 ~p~~g~~~~v~~~~~~------~~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 372 KPEGGMFIWVTLPDGI------DSKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKE 444 (448)
T ss_dssp CCSBSSEEEEECSTTC------CHHHHHHHHHHT-TEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHH
T ss_pred CCCccEEEEEEcCCCC------CHHHHHHHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 8899999999997632 267889999888 9999999988653 357999999865789999999999999987
Q ss_pred HHh
Q 046900 437 RER 439 (442)
Q Consensus 437 ~~~ 439 (442)
..+
T Consensus 445 ~~~ 447 (448)
T 3aow_A 445 ELK 447 (448)
T ss_dssp HHC
T ss_pred HHh
Confidence 643
No 6
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-49 Score=394.49 Aligned_cols=360 Identities=18% Similarity=0.292 Sum_probs=293.0
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|||+.+.+.++ ++.+.+.+.+.... ....+|++..|.++||+++++++.+.+| .++++++|++
T Consensus 56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~v~~ 123 (447)
T 3b46_A 56 GRELINLGQGFFSYSPPQFAIKEAQKALDI----------PMVNQYSPTRGRPSLINSLIKLYSPIYN--TELKAENVTV 123 (447)
T ss_dssp TSCCEECCCCSCSSCCCHHHHHHHHHHTTS----------GGGGSCCCTTCCHHHHHHHHHHHTTTTT--SCCCGGGEEE
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhC----------cCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEEE
Confidence 457899999987653 35566665554321 0245798888999999999999987665 4467889999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCC----------CCcCCHHHHHHHHHHHH
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSN----------NFQITPQALEAAYKEAE 195 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~----------~~~~d~~~l~~~l~~~~ 195 (442)
|+|+++++.+++.+++++||.|++++|+|+.+...++. .|++++.+|+++++ +|.+|++.|++.+++
T Consensus 124 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-- 200 (447)
T 3b46_A 124 TTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIEL-CGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITS-- 200 (447)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHH-TTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCT--
T ss_pred eCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHH-cCCEEEEEeCCCccccccccccccCcccCHHHHHHhhcc--
Confidence 99999999999999999999999999999999999885 89999999987653 688999999988753
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHH-HhhhcCCCCCcEEEEe
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEI-LEARQYKDSERVHIVY 274 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~-~~~~~~~~~~~vi~~~ 274 (442)
++++|++++|+||||.++|.+++++|+++|++||++||+||+|.++.|++ .+.++..+ ... .+++++++
T Consensus 201 ----~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~-----~~~~i~i~ 270 (447)
T 3b46_A 201 ----KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEI-----GQLTLTVG 270 (447)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHH-----HTTEEEEE
T ss_pred ----CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCC-----CCcEEEEe
Confidence 78999999999999999999999999999999999999999999998876 33444444 211 36889999
Q ss_pred cCcccCCCCCceeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046900 275 SLSKDLGLPGFRVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS 352 (442)
Q Consensus 275 S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 352 (442)
|+||.||++|+|+||+++.++.+.+.+.... ..+..+++.|.++.++|+.... +.+++++++.++++++++.+.|++
T Consensus 271 S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 349 (447)
T 3b46_A 271 SAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALK-IGYFEKMRQEYINKFKIFTSIFDE 349 (447)
T ss_dssp EHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcc-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999994456666655432 3456788999998888875422 556888999999999999999998
Q ss_pred CCCeeecCCceEEEEEecCCcccccC---------hhhHHHHHHHHHHcCcEEEeCCCCCCCC-----CCCEEEEEeecC
Q 046900 353 AGIECLKGNAGLFCWMNLSPLLEEQT---------REGELALWDSMLHEVKLNISPGSSCHCS-----EPGWFRVCFANM 418 (442)
Q Consensus 353 ~g~~~~~~~~g~~~~~~~~~~~~~~~---------~~~~~~l~~~l~~~~gi~v~pg~~f~~~-----~~~~iRls~~~~ 418 (442)
.|+++..|++|+|+|++++....... ..++.++++.|++++||.+.||+.|+.. .++++||+++.
T Consensus 350 ~g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~- 428 (447)
T 3b46_A 350 LGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK- 428 (447)
T ss_dssp HTCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS-
T ss_pred CCCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC-
Confidence 89998889999999999975310000 1146688888887679999999988743 25799999997
Q ss_pred CHHHHHHHHHHHHHH
Q 046900 419 SEQTLEVALKRIHNF 433 (442)
Q Consensus 419 ~~e~i~~~l~~l~~~ 433 (442)
+++++++++++|+++
T Consensus 429 ~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 429 DDAYLENAVERLKLL 443 (447)
T ss_dssp CHHHHHHHHHHGGGG
T ss_pred CHHHHHHHHHHHHHH
Confidence 899999999999873
No 7
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=6.4e-48 Score=379.69 Aligned_cols=353 Identities=18% Similarity=0.293 Sum_probs=293.2
Q ss_pred CCCCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCc-cCCC-
Q 046900 45 TNPSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK-FDLN- 121 (442)
Q Consensus 45 ~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~~- 121 (442)
....++|||+.+++.++ ++.+.+.+.+... ....|++..|..++|+++++|+.+.++ .. ++++
T Consensus 27 ~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~~ 92 (396)
T 3jtx_A 27 PEGMEAVPLHIGEPKHPTPKVITDALTASLH------------ELEKYPLTAGLPELRQACANWLKRRYD--GLTVDADN 92 (396)
T ss_dssp CTTCCCEECSCCSCCSCCCHHHHHHHHHTGG------------GGGSCCCTTCCHHHHHHHHHHHHHHTT--TCCCCTTT
T ss_pred ccCCCeEEeCCcCCCCCCCHHHHHHHHHHhh------------hccCCCCCCCcHHHHHHHHHHHHHhcC--CCCCCCCC
Confidence 34567899999998875 3666666665531 246798888999999999999998876 33 5688
Q ss_pred cEEEecChHHHHHHHHHhhcCCC-----CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 122 RIVVTAGATAANELLTFILADPG-----DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~g-----d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
+|++|+|+++++.+++.+++++| |.|+++.|+|..+...++. .|++++.++++ +++|.+|++.|++++.+
T Consensus 93 ~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~-~g~~~~~v~~~-~~g~~~d~~~l~~~~~~--- 167 (396)
T 3jtx_A 93 EILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLL-GGGEIHFANCP-APSFNPDWRSISEEVWK--- 167 (396)
T ss_dssp SEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHH-TTCEEEEEECC-TTTCCCCGGGSCHHHHH---
T ss_pred eEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHH-cCCEEEEeecC-CCCCccCHHHHHHhhcc---
Confidence 99999999999999999999997 7999999999999998884 99999999994 45788999999999986
Q ss_pred cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecC
Q 046900 197 KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSL 276 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~ 276 (442)
+++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++..+.+......... ...+++++++||
T Consensus 168 ---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~ 243 (396)
T 3jtx_A 168 ---RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLG-RSRQKLLMFTSL 243 (396)
T ss_dssp ---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTT-CCCTTEEEEEES
T ss_pred ---CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcc-cccCcEEEEecc
Confidence 7899999999999999999999999999999999999999999999887744445444321100 014789999999
Q ss_pred cccCCCCCceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 046900 277 SKDLGLPGFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG 354 (442)
Q Consensus 277 SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 354 (442)
||.|+++|+|+||+++ ++.+.+.+..... .+.++++.|.++.+++... +++++.++.++++++.+.+.|++.
T Consensus 244 sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~- 317 (396)
T 3jtx_A 244 SKRSNVPGLRSGFVAG-DAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDE----QHVIDNRRLYQEKFERVIPILQQV- 317 (396)
T ss_dssp TTTSSCGGGCCEEEEE-CHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred ccccCCcccceEEEEe-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9999999999999998 5667666655433 3567899999999988864 357788899999999999999876
Q ss_pred CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC------CCCCEEEEEeecCCHHHHHHHHH
Q 046900 355 IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC------SEPGWFRVCFANMSEQTLEVALK 428 (442)
Q Consensus 355 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~------~~~~~iRls~~~~~~e~i~~~l~ 428 (442)
+.+..+.+|+|+|++++.. +..+++..|++++||.+.||+.|+. ...+++||+++. ++++++++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~~~i~~~l~ 389 (396)
T 3jtx_A 318 FDVKLPDASFYIWLKVPDG-------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DVATCVKAAE 389 (396)
T ss_dssp SCCCCCSSSSEEEEECTTS-------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CHHHHHHHHH
T ss_pred CCccCCCeeEEEEEECCCC-------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CHHHHHHHHH
Confidence 5667788999999999862 2678888887767999999999875 246899999998 9999999999
Q ss_pred HHHHHH
Q 046900 429 RIHNFM 434 (442)
Q Consensus 429 ~l~~~l 434 (442)
+|++++
T Consensus 390 ~l~~~l 395 (396)
T 3jtx_A 390 DIVSLY 395 (396)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 999875
No 8
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-47 Score=387.82 Aligned_cols=349 Identities=19% Similarity=0.293 Sum_probs=280.0
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCC----eEEEcCCCCcChHHhHhh
Q 046900 88 NALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGD----ALLVPTPYYPGFDRDLRW 163 (442)
Q Consensus 88 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~ 163 (442)
...|++..|.+++|++||+|+.+++| ++++++++|++|+|+++++.+++.+|+++|| .|+++.|+|+.|...+..
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~g-G~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~ 200 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDG-GVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISE 200 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTT-TCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcC-CCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHH
Confidence 45799999999999999999998763 2557899999999999999999999999875 999999999999999985
Q ss_pred hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 164 RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 164 ~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
.|++++.++++++++|.+|+++|++.+++... +.++++|+++||+||||.++|.+++++|+++|++|+++||+||+|+
T Consensus 201 -~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~ 278 (498)
T 3ihj_A 201 -LDAIQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQ 278 (498)
T ss_dssp -TTCEEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred -cCCEEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcc
Confidence 89999999999888899999999999987422 1358999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-CcccHHHHHhhhcC--CCCCcEEEEecCcccC-CCCCceeEEEee--cCHHHHHHHHHccc-cCCCcHHHHH
Q 046900 244 GSAFSSS-EFVSIAEILEARQY--KDSERVHIVYSLSKDL-GLPGFRVGTIYS--YNDKVVTTARRMSS-FTLISSQTQY 316 (442)
Q Consensus 244 ~~~~~~~-~~~s~~~~~~~~~~--~~~~~vi~~~S~SK~~-g~~G~RiG~i~~--~~~~~~~~~~~~~~-~~~~s~~~q~ 316 (442)
++.|++. .+.++.++..+.+. ....++++++||||.| |++|+|+||++. .++.+.+.+.+... ....+.+.|.
T Consensus 279 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~ 358 (498)
T 3ihj_A 279 DNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQA 358 (498)
T ss_dssp TCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHH
T ss_pred ccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHH
Confidence 9999764 67788877543110 0124589999999999 899999999983 36777776665433 3556789999
Q ss_pred HHHHHhcCc----hhHH---HHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCCccc------ccChhhH
Q 046900 317 LLASMLSNK----KFTE---NYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSPLLE------EQTREGE 382 (442)
Q Consensus 317 ~~~~~l~~~----~~~~---~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~------~~~~~~~ 382 (442)
++..++++. ..+. ++.++.++.++++++++.+.|++. |+++.+|++|+|+|++++.... ..+....
T Consensus 359 a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~ 438 (498)
T 3ihj_A 359 AMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPD 438 (498)
T ss_dssp HHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHH
T ss_pred HHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcH
Confidence 999998752 1112 334677889999999999999987 9999999999999987642110 0011122
Q ss_pred HHHHHHHHHcCcEEEeCCCCCCC-CCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 383 LALWDSMLHEVKLNISPGSSCHC-SEPGWFRVCFANMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 383 ~~l~~~l~~~~gi~v~pg~~f~~-~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
..++..+++++||.+.||+.|+. .+++++|++++. +++++++++++|+++++++.++
T Consensus 439 ~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~-~~e~l~~~i~~L~~~~~~~~~~ 496 (498)
T 3ihj_A 439 MFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILP-PVEKLKTVLQKVKDFHINFLEK 496 (498)
T ss_dssp HHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHHHHHHH
Confidence 33366777767999999999985 446799999985 8999999999999999987654
No 9
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=1.7e-48 Score=383.19 Aligned_cols=342 Identities=15% Similarity=0.202 Sum_probs=268.7
Q ss_pred Cceeeeecccc------cccHHHHHHHHHhCC-CCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 48 SGVIQMGLAEN------QVSFDLLEEYLEQQP-EASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 48 ~~~i~l~~~~n------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
.++|||++++. +.+++.+.+... .. .. ....+|++..|.++||+++++|+.+..+ ..+++
T Consensus 29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~----------~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~ 95 (405)
T 3k7y_A 29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTEN----------YKEKPYLLGNGTEDFSTLTQNLIFGNNS--KYIED 95 (405)
T ss_dssp SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHH----------CCCCCCCTTSSCHHHHHHHHHHHHCSSC--TTTTT
T ss_pred cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCC----------CCCCCCCCCCCcHHHHHHHHHHHcCCCC--ccccc
Confidence 47899999862 223466666543 21 00 1246799999999999999999975433 23456
Q ss_pred Cc--EEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 121 NR--IVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 121 ~~--i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
++ |++|+|+++++.+++.++++ + |.|++++|+|+.|...++. .|++++.+|+.++++|.+|++.|++.+++.
T Consensus 96 ~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-- 171 (405)
T 3k7y_A 96 KKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIES-RGFNLKYINFFDYNLIDINYDLFLNDLRNI-- 171 (405)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHT-TTCEEEEECCEETTTTEECHHHHHHHHHHS--
T ss_pred cceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHH-cCCeEEEEeccccccCCcCHHHHHHHHHhC--
Confidence 64 69999999999999999987 8 9999999999999999995 999999999854557899999999999752
Q ss_pred cCCceeEEEEeCC-CCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC--CcccHHHHHhhhcCCCCCcEEEE
Q 046900 197 KDMRVRGVLITNP-SNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS--EFVSIAEILEARQYKDSERVHIV 273 (442)
Q Consensus 197 ~~~~~~~v~l~~P-~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~--~~~s~~~~~~~~~~~~~~~vi~~ 273 (442)
.+++++++++| |||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+... .+++|++
T Consensus 172 --~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~-----~~~~i~~ 244 (405)
T 3k7y_A 172 --PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEK-----NIAFSVC 244 (405)
T ss_dssp --CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTT-----TCCEEEE
T ss_pred --CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhc-----CCcEEEE
Confidence 24567787765 89999999999999999999999999999999999988642 22344444432 4789999
Q ss_pred ecCcccCCCCCceeEEEee--cCHHHHHHH----HHc--cccCCCcHHHHHHHHHHhcCchhH---HHHHHHHHHHHHHH
Q 046900 274 YSLSKDLGLPGFRVGTIYS--YNDKVVTTA----RRM--SSFTLISSQTQYLLASMLSNKKFT---ENYIKTNRERLQKR 342 (442)
Q Consensus 274 ~S~SK~~g~~G~RiG~i~~--~~~~~~~~~----~~~--~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~ 342 (442)
+||||+||++|||+||+++ +++.+.+.+ +.. ......+.+.|.++..++.+..+. .++++++++.|+++
T Consensus 245 ~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~ 324 (405)
T 3k7y_A 245 QSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNN 324 (405)
T ss_dssp EECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999864 455544333 222 122345678999999999885322 45567788899999
Q ss_pred HHHHHHHHH----hCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEE
Q 046900 343 YQMIIEGLR----SAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVC 414 (442)
Q Consensus 343 ~~~l~~~L~----~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls 414 (442)
|+.+.+.|+ +.| +++.+|+||||+|+.++. +++++| +++||.+.||. |||
T Consensus 325 R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~-----------~~~~~L-~~~gV~v~p~~----------Ris 382 (405)
T 3k7y_A 325 RILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA-----------KIAEHL-KTHHIYIINNG----------RIN 382 (405)
T ss_dssp HHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG-----------GGTTTT-TTTTEECCTTS----------EEE
T ss_pred HHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH-----------HHHHHH-HHCCEeecCCC----------eEE
Confidence 999999999 776 578889999999988753 234566 67799999952 999
Q ss_pred eecCCHHHHHHHHHHHHHHHH
Q 046900 415 FANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 415 ~~~~~~e~i~~~l~~l~~~l~ 435 (442)
++.++++++++++++|+++++
T Consensus 383 ~a~~~~~~i~~~~~~i~~~~~ 403 (405)
T 3k7y_A 383 VSGITKNNVDYIADKICLSLS 403 (405)
T ss_dssp GGGCCTTHHHHHHHHHHHHHH
T ss_pred EeccCHHHHHHHHHHHHHHHh
Confidence 987788999999999999875
No 10
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=2.5e-48 Score=383.81 Aligned_cols=353 Identities=18% Similarity=0.331 Sum_probs=291.9
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC-CcEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i~ 124 (442)
..++|||+.+++.++ ++.+.+.+.+.... .....|++..|..++|+++|+|+.+.+| .++++ ++|+
T Consensus 46 g~~~idl~~g~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~v~ 113 (404)
T 2o1b_A 46 PLPLINMAVGIPDGPTPQGIIDHFQKALTI----------PENQKYGAFHGKEAFKQAIVDFYQRQYN--VTLDKEDEVC 113 (404)
T ss_dssp SSCCEECCCCSCSSCCCHHHHHHHHHHTTC----------HHHHSCCCTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEE
T ss_pred CCCEEecCCcCCCCCCCHHHHHHHHHHHhC----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCcccEE
Confidence 345899999998764 45566666554321 0134688878999999999999988776 34566 7999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++.+++.+++++||.|+++.|+|..+...++. .|++++.+++++ ++|.+|++.|++.++. ++++|
T Consensus 114 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v 185 (404)
T 2o1b_A 114 ILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLL-ADGKPVPLNLEP-PHYLPDWSKVDSQIID------KTKLI 185 (404)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHH-TTCEEEEEECCT-TTCCCCGGGSCHHHHH------HEEEE
T ss_pred EcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH-CCCEEEEeccCc-ccCcCCHHHHHHhhcc------CceEE
Confidence 999999999999999999999999999999999999884 899999999876 5688999999999865 78999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.++|.+++++|+++|+++|++||+||+|+++.+++ .+.++..+... .+++++++|+||.+|++|
T Consensus 186 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~-----~~~~i~~~s~sK~~g~~G 259 (404)
T 2o1b_A 186 YLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENG-----KDVAIEIYSLSKGYNMSG 259 (404)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTH-----HHHEEEEEESTTTTTCGG
T ss_pred EEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCC-----CCCEEEEEecchhccCch
Confidence 999999999999999999999999999999999999999988865 33344443211 257899999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||+++ ++.+.+.+..... .+..+++.|.++.++++.. .+++++.++.++++++++.+.|++.|+++..+++
T Consensus 260 ~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 335 (404)
T 2o1b_A 260 FRVGFAVG-NKDMIQALKKYQTHTNAGMFGALQDAAIYALNHY---DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKG 335 (404)
T ss_dssp GCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCCB
T ss_pred hheEeEec-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCc
Confidence 99999998 5666666654332 3567889999998888753 4568888999999999999999988998888899
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
|+|+|++++... +..++++.|++++||.+.||+.|+...++++||+++. +++++++++++|++++++
T Consensus 336 g~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 336 GIYVWLETPPGY------DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp SSEEEEECCTTC------CHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHHHHHHHHHHGGGGG
T ss_pred ceEEEEeCCCCC------CHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 999999997532 2567888888655999999998865456899999998 888999999999988754
No 11
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.6e-48 Score=384.67 Aligned_cols=360 Identities=19% Similarity=0.309 Sum_probs=291.7
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC-CcEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i~ 124 (442)
+.++|||+.+.+.++ ++.+.+.+.+..... ....|++..|..++|+++|+|+.+.+| .++++ ++|+
T Consensus 36 g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~----------~~~~y~~~~g~~~l~~~ia~~~~~~~g--~~~~~~~~v~ 103 (412)
T 2x5d_A 36 GEDIIDLSMGNPDGPTPPHIVEKLCTVAQRE----------DTHGYSTSRGIPRLRRAISHWYRDRYD--VQIDPESEAI 103 (412)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHTC-------------------CTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEE
T ss_pred CCCEEecCCCCCCCCCCHHHHHHHHHHHhCC----------CCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCcCEE
Confidence 457899999988763 466666666654210 134688778999999999999988776 34577 7999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++.+++.+++++||.|+++.|+|+.+...++. .|++++.+|++++++|.+|++.|++.+++ ++++|
T Consensus 104 ~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~i~~------~~~~v 176 (412)
T 2x5d_A 104 VTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVI-AGAQVRSVPLVPGIDFFNELERAIRESIP------KPRMM 176 (412)
T ss_dssp EESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHH-HTCEEEEEECSTTSCHHHHHHHHHHTEES------CCSEE
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHH-cCCEEEEeecCCccCCCCCHHHHHHhccc------CceEE
Confidence 999999999999999999999999999999999998884 89999999998765677889999887753 78899
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.+++.+++++|+++|++||++||+||+|+.+.+++..+.++..+... .+++++++|+||.+|++|
T Consensus 177 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-----~~~~i~~~s~sK~~~~~G 251 (412)
T 2x5d_A 177 ILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGA-----KDIAVEFFTLSKSYNMAG 251 (412)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTG-----GGTEEEEEECC-CCSCTT
T ss_pred EECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCc-----cCcEEEEecCccccCCcc
Confidence 999999999999999999999999999999999999999998866545555544221 367899999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||+++ ++.+.+.+..... .+..+++.|.++.++++... +++++.++.++++++++.+.|++.|+++..+++
T Consensus 252 ~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 327 (412)
T 2x5d_A 252 WRIGFMVG-NPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQ---QCVRDIARQYQQRRDVLVKGLREAGWMVENPKA 327 (412)
T ss_dssp SCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCS---HHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCSB
T ss_pred cceEEEEc-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCe
Confidence 99999999 5666666654333 36678899999999887642 457888899999999999999888888888899
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
|+|+|++++..... .+..++++.|++++||.+.||+.|+...++++||+++. +++++++++++|++++++..
T Consensus 328 g~~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 328 SMYVWAKIPEPYAH---LGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp SSEEEEECCTTTGG---GCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHTT
T ss_pred eeEEEEEcCCccCC---CCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhcC
Confidence 99999999753210 12567888887756999999998865456899999998 89999999999999988643
No 12
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=7.1e-48 Score=378.52 Aligned_cols=357 Identities=22% Similarity=0.386 Sum_probs=293.1
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCc-EEE
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNR-IVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~-i~~ 125 (442)
.++|+|+.+++.++ ++.+.+.+.+.... ....|++..|..++|+++|+|+.+.+| .++++++ |++
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~~v~~ 92 (389)
T 1gd9_A 26 KDVISLGIGEPDFDTPQHIKEYAKEALDK-----------GLTHYGPNIGLLELREAIAEKLKKQNG--IEADPKTEIMV 92 (389)
T ss_dssp SSCEECCCCSCSSCCCHHHHHHHHHHHHT-----------TCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEEE
T ss_pred cCeEecCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCeEEE
Confidence 46799999988763 35555544433211 124688878999999999999988776 4467889 999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++.+++++||.|++++|+|+.+...++. .|++++.+|++++++|.+|++.|++.+++ ++++|+
T Consensus 93 ~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 165 (389)
T 1gd9_A 93 LLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVIL-AGGKPVEVPTYEEDEFRLNVDELKKYVTD------KTRALI 165 (389)
T ss_dssp ESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHH-HTCEEEEEECCGGGTTCCCHHHHHHHCCT------TEEEEE
T ss_pred cCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHH-CCCEEEEeccCCccCCCCCHHHHHHhcCc------CceEEE
Confidence 99999999999999999999999999999999998885 89999999987655688999999998864 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++..+.++..+.. ..+++++++|+||.+|++|+
T Consensus 166 ~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G~ 240 (389)
T 1gd9_A 166 INSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDG-----MFERTITVNGFSKTFAMTGW 240 (389)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTT-----CGGGEEEEEESTTTTTCGGG
T ss_pred EECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccC-----CCCCEEEEecChhhcCCccc
Confidence 9999999999999999999999999999999999999998887653445544321 13678999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||+++ ++.+.+.+..... .+..+++.|.++.++++.... .+++++.++.++++++++.+.|++.|+++..+++|
T Consensus 241 r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 318 (389)
T 1gd9_A 241 RLGFVAA-PSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERS-WKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGA 318 (389)
T ss_dssp CCEEEEC-CHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBT
T ss_pred ceEEEEE-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCee
Confidence 9999999 4666666654333 356788999999999986432 23688889999999999999999889888888999
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+|+|++++.... +..++++.|++++||.+.||..|+...++++||+++. +++++++++++|++++++.
T Consensus 319 ~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 319 FYIFPRIRDTGL-----TSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERVLKER 386 (389)
T ss_dssp TEECCBCGGGTC-----CHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEeccCCCC-----CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 999998864100 2568888888555999999998875456899999998 8999999999999998753
No 13
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=5.1e-48 Score=384.31 Aligned_cols=360 Identities=19% Similarity=0.324 Sum_probs=295.3
Q ss_pred CCceeeeeccccc-----ccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 47 PSGVIQMGLAENQ-----VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 47 ~~~~i~l~~~~n~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
..++|+|+.+.+. .+++.+.+.+.+.... .....|++..|+.++|+++|+++++. + .+++++
T Consensus 53 ~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~lr~~la~~~~~~-~--~~~~~~ 119 (427)
T 3dyd_A 53 NKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDS----------GKYNGYAPSIGFLSSREEIASYYHCP-E--APLEAK 119 (427)
T ss_dssp TSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHH----------CCSSSCCCTTCCHHHHHHHHHHHCBT-T--BCCCGG
T ss_pred CCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhc----------CcCCCCCCCCCcHHHHHHHHHHHhhc-C--CCCChH
Confidence 4578999998743 2445555555543211 01347888889999999999999754 3 457789
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
+|++|+|+++++.+++.+++++||.|+++.|+|..+...++. .|++++.++++++++|.+|++.+++.+++ ++
T Consensus 120 ~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~ 192 (427)
T 3dyd_A 120 DVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAES-MGIEVKLYNLLPEKSWEIDLKQLEYLIDE------KT 192 (427)
T ss_dssp GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHH-TTCEEEEEEEEGGGTTEECHHHHHSSCCT------TE
T ss_pred HEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH-cCCEEEEEecccccCCCCCHHHHHHHhcc------CC
Confidence 999999999999999999999999999999999999998884 99999999998767889999999998864 68
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
+++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++..+.++..+.. ..++++++||||.|+
T Consensus 193 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~------~~~vi~~~S~sK~~~ 266 (427)
T 3dyd_A 193 ACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLST------DVPILSCGGLAKRWL 266 (427)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCS------SCCEEEEEESTTTSS
T ss_pred CEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCC------CCcEEEEeeccccCC
Confidence 89999999999999999999999999999999999999999999988766666655543 356899999999999
Q ss_pred CCCceeEEEeecC------HHHHHHHHHcc-ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 046900 282 LPGFRVGTIYSYN------DKVVTTARRMS-SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA- 353 (442)
Q Consensus 282 ~~G~RiG~i~~~~------~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 353 (442)
++|+|+||+++++ +.+.+.+.... ..+..+++.|.++.++++... .+++++++++++++++.+.+.|++.
T Consensus 267 ~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~ 344 (427)
T 3dyd_A 267 VPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRTP--GEFYHNTLSFLKSNADLCYGALAAIP 344 (427)
T ss_dssp CGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred CcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999965 45665555432 246778999999999998432 4567788899999999999999988
Q ss_pred CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 354 GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 354 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
|+++..|.+|+|+|+.++.... ....+..++++.|++++||.+.||+.|+. ++++||+++. +++++++++++|.++
T Consensus 345 g~~~~~p~~g~~~~~~l~~~~~-~~~~~~~~~~~~l~~~~gV~v~~g~~~~~--~~~iRis~~~-~~e~i~~~l~~l~~~ 420 (427)
T 3dyd_A 345 GLRPVRPSGAMYLMVGIEMEHF-PEFENDVEFTERLVAEQSVHCLPATCFEY--PNFIRVVITV-PEVMMLEACSRIQEF 420 (427)
T ss_dssp TEEEECCSBTTEEEEEECGGGC-TTCSSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEESCS-CHHHHHHHHHHHHHH
T ss_pred CceecCCCeeEEEEEecCHhhc-CCCCCHHHHHHHHHHHCCEEEECCcccCC--CCeEEEEECC-CHHHHHHHHHHHHHH
Confidence 8888889999999998863210 00013578888888666999999998863 6899999986 899999999999999
Q ss_pred HHHHH
Q 046900 434 MQKRE 438 (442)
Q Consensus 434 l~~~~ 438 (442)
+++++
T Consensus 421 l~~~~ 425 (427)
T 3dyd_A 421 CEQHY 425 (427)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 98765
No 14
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=2.9e-48 Score=385.43 Aligned_cols=364 Identities=20% Similarity=0.333 Sum_probs=296.5
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC-CcEEE
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRIVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i~~ 125 (442)
.++|+|+.+.+.++ ++.+.+.+.+..... .....|++..|..++|+++++++++.++ .++++ ++|++
T Consensus 28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~---------~~~~~y~~~~g~~~lr~~la~~~~~~~g--~~~~~~~~i~~ 96 (422)
T 3fvs_A 28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSGD---------FMLNQYTKTFGYPPLTKILASFFGELLG--QEIDPLRNVLV 96 (422)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSC---------GGGGSCCCTTCCHHHHHHHHHHHHHHHT--CCCCHHHHEEE
T ss_pred CCceEeCCCCCCCCCCHHHHHHHHHHHhCC---------CccCCCCCCCCCHHHHHHHHHHHHHhhC--CCCCCCCcEEE
Confidence 47899999998764 355555555432110 0135798888999999999999998877 45677 69999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC----C------CCCcCCHHHHHHHHHHHH
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS----S------NNFQITPQALEAAYKEAE 195 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~----~------~~~~~d~~~l~~~l~~~~ 195 (442)
|+|+++++..++.+++++||+|+++.|+|..+...++. .|++++.++++. + .+|.+|++.|++.+++
T Consensus 97 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~-- 173 (422)
T 3fvs_A 97 TVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMM-AGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS-- 173 (422)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHH-TTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT--
T ss_pred ECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHH-cCCEEEEEecccccccccccccccCCCCCHHHHHhhcCC--
Confidence 99999999999999999999999999999999998885 999999999876 2 3678999999988764
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEec
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYS 275 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S 275 (442)
++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++..+.++..+... .+++++++|
T Consensus 174 ----~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~S 244 (422)
T 3fvs_A 174 ----RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGM-----WERTLTIGS 244 (422)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTT-----GGGEEEEEE
T ss_pred ----CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccc-----cCcEEEEec
Confidence 78999999999999999999999999999999999999999999999887666666555432 478999999
Q ss_pred CcccCCCCCceeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHHHhcCc----hhHHHHHHHHHHHHHHHHHHHHHH
Q 046900 276 LSKDLGLPGFRVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLASMLSNK----KFTENYIKTNRERLQKRYQMIIEG 349 (442)
Q Consensus 276 ~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~l~~~ 349 (442)
+||.||++|+|+||+++ ++.+.+.+.... ..+.++++.|.++.+++... ....+++++.++.++++++.+.+.
T Consensus 245 ~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 323 (422)
T 3fvs_A 245 AGKTFSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRS 323 (422)
T ss_dssp HHHHHTCGGGCCEEEEC-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred chhccCCccceEEEEEe-CHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 456666655433 24667889999998888741 011456788899999999999999
Q ss_pred HHhCCCeeecCCceEEEEEecCCccccc-------ChhhHHHHHHHHHHcCcEEEeCCCCCCC-----CCCCEEEEEeec
Q 046900 350 LRSAGIECLKGNAGLFCWMNLSPLLEEQ-------TREGELALWDSMLHEVKLNISPGSSCHC-----SEPGWFRVCFAN 417 (442)
Q Consensus 350 L~~~g~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~~l~~~l~~~~gi~v~pg~~f~~-----~~~~~iRls~~~ 417 (442)
|++.|+++..|++|+|+|++++...... ......+++..+++++||.+.||+.|+. ...+++||+++.
T Consensus 324 L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~ 403 (422)
T 3fvs_A 324 LQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK 403 (422)
T ss_dssp HHTTTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC
T ss_pred HHHcCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC
Confidence 9999999889999999999986521100 0001457888888877999999999864 346899999998
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 046900 418 MSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 418 ~~~e~i~~~l~~l~~~l~~ 436 (442)
+++++++++++|++++++
T Consensus 404 -~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 404 -DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp -CHHHHHHHHHHHHHHHHC
T ss_pred -CHHHHHHHHHHHHHHHhh
Confidence 999999999999998753
No 15
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=3.8e-47 Score=371.50 Aligned_cols=345 Identities=15% Similarity=0.212 Sum_probs=286.0
Q ss_pred ceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 49 GVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 49 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
++|||+.++++++ ++.+.+.+.+.. .....|++..|..++|+++|+++.+.+| .++++++|++|+
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~------------~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~i~~t~ 89 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHT------------HSLNIYPKSAFEESLRAAQRGFFKRRFK--IELKENELISTL 89 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTG------------GGGGSCCCTTCCHHHHHHHHHHHHHHHS--CCCCGGGEEEES
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhh------------hhcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCHHHEEECc
Confidence 8899999998874 366666666543 1346798888999999999999998877 345789999999
Q ss_pred ChHHHHHHHHHhhcCC--CCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 128 GATAANELLTFILADP--GDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~--gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+++++.+++.+++++ ||+|+++.|+|..+...++. .|++++.+|+++++++.+ .+++.+.+ ++++++
T Consensus 90 g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~---~l~~~~~~------~~~~v~ 159 (376)
T 3ezs_A 90 GSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKF-IKAKSLLMPLTKENDFTP---SLNEKELQ------EVDLVI 159 (376)
T ss_dssp SSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHH-TTCEEEEEECCGGGTSCC---CCCHHHHH------HCSEEE
T ss_pred CcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHH-cCCEEEEcccCCCCCcch---hHHhhhcc------CCCEEE
Confidence 9999999999999999 99999999999999999884 999999999987655544 56666665 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++ .+.++.......+.+..+++++++|+||.+|++|+
T Consensus 160 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~ 238 (376)
T 3ezs_A 160 LNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENT-PPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGL 238 (376)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS-CCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGG
T ss_pred EcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC-CCCCHHHccccccccccCcEEEEecchhccCCccc
Confidence 99999999999999999999999999999999999999998877 34555554331000025889999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||+++ ++.+.+.+..... .+..+++.|.++.++++..+ ++++.++.++++++.+.+.|+ ++. .+.+|
T Consensus 239 r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~--~~~--~~~~~ 309 (376)
T 3ezs_A 239 RSGFIAG-DSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDR----HAEFFRNIYANNLKLARKIFK--NTL--IYPYS 309 (376)
T ss_dssp CCEEEEE-CHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSH----HHHHHHHHHHHHHHHHHHHST--TCC--CCSBS
T ss_pred eeEEEee-CHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcH----HHHHHHHHHHHHHHHHHHHhc--CCC--CCCcc
Confidence 9999998 6677777665443 35678899999999998744 467888999999999999998 554 67889
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCC--CCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCH--CSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~--~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+|+|++++. ..++++.|++++||.+.||+.|+ ...++++||+++. +++++++++++|+++++++
T Consensus 310 ~~~~~~~~~---------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~~ 375 (376)
T 3ezs_A 310 FYVYLPVQN---------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLLEKPLEIIETYRENH 375 (376)
T ss_dssp SEEEEECSC---------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHHHHHHHHHHHHHCC-
T ss_pred eEEEEECCC---------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHhc
Confidence 999999872 56888888884599999999997 3456899999987 9999999999999988653
No 16
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=5.7e-48 Score=381.76 Aligned_cols=360 Identities=21% Similarity=0.325 Sum_probs=293.5
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC-CcEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i~ 124 (442)
..++|+|+.+++.++ ++.+.+.+.+.... .....|++..|..++|+++|+++++.++ ..+++ ++|+
T Consensus 22 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~l~~~la~~~~~~~~--~~~~~~~~i~ 89 (410)
T 3e2y_A 22 DPSVVNLGQGFPDISPPSYVKEELSKAAFI----------DNMNQYTRGFGHPALVKALSCLYGKIYQ--RQIDPNEEIL 89 (410)
T ss_dssp STTSEECSSCCCCSCCCHHHHHHHHHHHTC----------GGGGSCCCTTCCHHHHHHHHHHHHHHHT--SCCCTTTSEE
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHHhC----------ccccCCCCCCChHHHHHHHHHHHHHHhC--CCCCCCCCEE
Confidence 357899999998764 45566655544321 1245788888999999999999998877 45677 7999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC---------CCCCcCCHHHHHHHHHHHH
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS---------SNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~---------~~~~~~d~~~l~~~l~~~~ 195 (442)
+|+|+++++..++.+++++||.|+++.|+|..+...+.. .|++++.++++. +.+|.+|++++++++++
T Consensus 90 ~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~-- 166 (410)
T 3e2y_A 90 VAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRM-AGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS-- 166 (410)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHH-TTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT--
T ss_pred EeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHH-cCCEEEEEeccccccccccccccCCcCCHHHHHhhcCC--
Confidence 999999999999999999999999999999999999885 899999999863 24577899999988754
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEec
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYS 275 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S 275 (442)
++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++..+.++..+... .+++++++|
T Consensus 167 ----~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~S 237 (410)
T 3e2y_A 167 ----KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGM-----WERTITIGS 237 (410)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTC-----GGGEEEEEE
T ss_pred ----CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCc-----cCeEEEEec
Confidence 78999999999999999999999999999999999999999999999887666666555332 478999999
Q ss_pred CcccCCCCCceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCc----hhHHHHHHHHHHHHHHHHHHHHHH
Q 046900 276 LSKDLGLPGFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNK----KFTENYIKTNRERLQKRYQMIIEG 349 (442)
Q Consensus 276 ~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~l~~~ 349 (442)
|||.+|++|+|+||+++ ++.+.+.+..... .+.++++.|.++..++.+. ....+++++.++.++++++.+.+.
T Consensus 238 ~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 316 (410)
T 3e2y_A 238 AGKTFSVTGWKLGWSIG-PAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRL 316 (410)
T ss_dssp HHHHSSCGGGCCEEEEC-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCCCceEEEEEE-CHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 5566666554332 4667889999998888631 011446788899999999999999
Q ss_pred HHhCCCeeecCCceEEEEEecCCccccc-----ChhhHHHHHHHHHHcCcEEEeCCCCCCCC-----CCCEEEEEeecCC
Q 046900 350 LRSAGIECLKGNAGLFCWMNLSPLLEEQ-----TREGELALWDSMLHEVKLNISPGSSCHCS-----EPGWFRVCFANMS 419 (442)
Q Consensus 350 L~~~g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~gi~v~pg~~f~~~-----~~~~iRls~~~~~ 419 (442)
|++.|+++..+++|+|+|++++...... ...+..+++..+++++||.+.||+.|+.. ..+++||+++. +
T Consensus 317 L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~ 395 (410)
T 3e2y_A 317 LNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK-K 395 (410)
T ss_dssp HHTTTCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC-C
T ss_pred HHHCCCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC-C
Confidence 9999999999999999999986532110 01124578888877779999999998653 25899999998 9
Q ss_pred HHHHHHHHHHHHH
Q 046900 420 EQTLEVALKRIHN 432 (442)
Q Consensus 420 ~e~i~~~l~~l~~ 432 (442)
++++++++++|++
T Consensus 396 ~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 396 DSTLDAAEEIFRA 408 (410)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999975
No 17
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.8e-47 Score=373.90 Aligned_cols=348 Identities=19% Similarity=0.287 Sum_probs=287.1
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~ 124 (442)
..++|||+.++++++ ++.+.+.+.+.... .....|++..|..++|+++|+++.+.+| .+++++ +|+
T Consensus 24 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~~~~~l~~~ia~~~~~~~g--~~~~~~~~v~ 91 (376)
T 2dou_A 24 GVGLIDLSIGSTDLPPPEAPLKALAEALND----------PTTYGYCLKSCTLPFLEEAARWYEGRYG--VGLDPRREAL 91 (376)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHTTC----------GGGSSCCCHHHHHHHHHHHHHHHHHHHS--CCCCTTTSEE
T ss_pred CCCEEeccCCCCCCCCCHHHHHHHHHHHhC----------CCcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCccEE
Confidence 356799999988763 35566666554321 1245688767899999999999988776 345666 999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++.+++++++++||+|+++.|+|+.+...++. .|++++.+|+ +++|.+|++.|++.+++ ++++|
T Consensus 92 ~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~-~g~~~~~~~~--~~~~~~d~~~l~~~l~~------~~~~v 162 (376)
T 2dou_A 92 ALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARV-ASLRTFLIPL--REDGLADLKAVPEGVWR------EAKVL 162 (376)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHH-TTCEEEEECB--CTTSSBCGGGSCHHHHH------HEEEE
T ss_pred EcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHH-cCCEEEEeeC--CCCCCCCHHHHHHhhcc------CceEE
Confidence 999999999999999999999999999999999998884 8999999998 35688999999999865 78999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.+++.+++++|+++|++||++||+||+|+++.+++. ..++..+... .+++++++||||.+|++|
T Consensus 163 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~-----~~~~i~~~s~sK~~~~~G 236 (376)
T 2dou_A 163 LLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGE-APSPLALPGA-----KERVVELFSLSKSYNLAG 236 (376)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC-CCCGGGSTTG-----GGTEEEEEEHHHHHTCGG
T ss_pred EECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCCC-----CCcEEEEecchhhcCChh
Confidence 9999999999999999999999999999999999999999887653 3333333211 367899999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||+++ ++.+.+.+...... +..+++.|.++.++++.. .+++++.++.++++++.+.+.|++. +++..+.+
T Consensus 237 ~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~ 311 (376)
T 2dou_A 237 FRLGFALG-SEEALARLERVKGVIDFNQYAGVLRMGVEALKTP---KEVVRGYARVYRERALGMAEALKGV-LSLLPPRA 311 (376)
T ss_dssp GCCEEEEE-CHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC---HHHHHHHHHHHHHHHHHHHHHHTTT-SEECCCCB
T ss_pred heeEEEec-CHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHh-cCccCCCe
Confidence 99999998 56666666543332 456889999999999863 4567888999999999999999988 88888889
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
|+|+|++++... +..++++.|+++ ||.+.||+.|+...++++||+++. +++++++++++|++++
T Consensus 312 ~~~~~~~~~~~~------~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 312 TMYLWGRLPEGV------DDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREAL 375 (376)
T ss_dssp SSEEEEECCTTC------CHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHTC
T ss_pred eEEEEEECCCCC------CHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 999999997532 256788899888 999999998865456899999987 8999999999998764
No 18
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=1.9e-47 Score=375.75 Aligned_cols=351 Identities=23% Similarity=0.394 Sum_probs=284.1
Q ss_pred CCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|||+.++++++. +.+.+.+.+.... ....|++..|..++|+++++++++.++ +++++++|++
T Consensus 30 g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~v~~ 96 (391)
T 3h14_A 30 GRRIIHMEVGQPGTGAPRGAVEALAKSLET-----------DALGYTVALGLPALRQRIARLYGEWYG--VDLDPGRVVI 96 (391)
T ss_dssp TCCCEECCCSSCSSCSCHHHHHHHHHHHC---------------------CCHHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCChHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 4578999999988753 5555555543211 135788888999999999999998877 4578899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++.+++++||+|+++.|+|..+...++. .|++++.++++++++|.+|++.|++. ++++|+
T Consensus 97 t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~---------~~~~v~ 166 (391)
T 3h14_A 97 TPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRA-LGLVPVDLPTAPENRLQPVPADFAGL---------DLAGLM 166 (391)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHH-TTCEEEEEECCGGGTTSCCHHHHTTS---------CCSEEE
T ss_pred ecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHH-cCCEEEEeecCcccCCCCCHHHHHhc---------CCeEEE
Confidence 99999999999999999999999999999999998885 99999999998777889999998864 578999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++. ..+...+ .+++++++|+||.+|++|+
T Consensus 167 i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~--------~~~~i~~~s~sK~~g~~G~ 237 (391)
T 3h14_A 167 VASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK-AVTALEL--------TDECYVINSFSKYFSMTGW 237 (391)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCGGGT--------CSSSEEEEESSSTTCCTTS
T ss_pred ECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC-CcChhhc--------CCCEEEEEechhccCCccc
Confidence 999999999999999999999999999999999999999888764 2333222 3678999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCee-ecCCc
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIEC-LKGNA 362 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~ 362 (442)
|+||++++ +.+.+.+..... .+..+++.|.++.+.+.. .+++++.++.++++++.+.+.|++.++.. ..+.+
T Consensus 238 r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 312 (391)
T 3h14_A 238 RVGWMVVP-EDQVRVVERIAQNMFICAPHASQVAALAALDC----DAELQANLDVYKANRKLMLERLPKAGFTRIAPPDG 312 (391)
T ss_dssp CCEEEECC-GGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCB
T ss_pred eeEEEEeC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHhCC----hHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCe
Confidence 99999995 455555554333 246788899988888873 35678889999999999999999886654 57888
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC-CCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC-SEPGWFRVCFANMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~-~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
++++|++++.... +..++++.|++++||.+.||+.|+. ..++++||+++. +++++++++++|+++++++...
T Consensus 313 ~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~~~~~~~~ 385 (391)
T 3h14_A 313 AFYVYADVSDLTD-----DSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEAFMQARGEG 385 (391)
T ss_dssp TTEEEEECTTTCS-----CHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHHC---
T ss_pred eEEEEEecCccCC-----CHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhccc
Confidence 8999999875211 3678888888877999999999976 346899999998 8999999999999999876543
No 19
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=1.3e-47 Score=377.95 Aligned_cols=361 Identities=16% Similarity=0.224 Sum_probs=291.4
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.+++.++ ++.+.+.+.+.... ....|++. ..++|+++++++.+.+| +++++++|++
T Consensus 30 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~--~~~l~~~la~~l~~~~g--~~~~~~~v~~ 94 (399)
T 1c7n_A 30 GNEVVPLSVADMEFKNPPELIEGLKKYLDE-----------TVLGYTGP--TEEYKKTVKKWMKDRHQ--WDIQTDWIIN 94 (399)
T ss_dssp CTTCCCCCSSSCSSCCCHHHHHHHHHHHHH-----------CCCSSBCC--CHHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCCceeeeecCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCC--cHHHHHHHHHHHHHHhC--CCCChhhEEE
Confidence 357899999988664 45555555443210 12457664 79999999999988766 4467889999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC-CCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD-SSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
|+|+++++.+++.+++++||.|+++.|+|+.+...+.. .|++++.+|++ ++++|.+|++.|++.+++ .++++|
T Consensus 95 t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~-----~~~~~v 168 (399)
T 1c7n_A 95 TAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKN-QERKIIECELLEKDGYYTIDFQKLEKLSKD-----KNNKAL 168 (399)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHT-TTCEEEECCCEEETTEEECCHHHHHHHHTC-----TTEEEE
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHH-cCCEEEecccccCCCCEEEcHHHHHHHhcc-----CCCcEE
Confidence 99999999999999999999999999999999998884 89999999986 334578999999999862 278999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++..+.++..+..+ ..+++++++|+||.+|++|
T Consensus 169 ~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G 244 (399)
T 1c7n_A 169 LFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQ----LADKTITFTAPSKTFNIAG 244 (399)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHH----HHTTEEEEECSHHHHTCGG
T ss_pred EEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCcc----ccCcEEEEEeChhhccccc
Confidence 999999999999999999999999999999999999999988876545555444221 0267899999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHcccc---CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeeec
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSF---TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS-A-GIECLK 359 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~ 359 (442)
+|+||++++++.+.+.++..... ...+++.|.++.++++.. .+++++.++.++++++++.+.|++ . |+++..
T Consensus 245 ~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 321 (399)
T 1c7n_A 245 MGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKEC---GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPL 321 (399)
T ss_dssp GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCC
T ss_pred hheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEec
Confidence 99999999666666666543332 256888999888888642 456788899999999999999988 5 888888
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+.+++++|++++.... +..++++.|++++||.+.||+.|+...++++||+++. +++++++++++|++++++.++
T Consensus 322 ~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 322 IEGTYLQWIDFRALKM-----DHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp CSBSSEEEEECGGGCC-----CHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHHC-
T ss_pred CCceEEEEEEcccCCC-----CHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc-CHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999874200 2567888887666999999998875456899999997 688999999999999998776
Q ss_pred hc
Q 046900 440 RR 441 (442)
Q Consensus 440 ~~ 441 (442)
|.
T Consensus 396 ~~ 397 (399)
T 1c7n_A 396 RH 397 (399)
T ss_dssp --
T ss_pred cC
Confidence 54
No 20
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=3.3e-47 Score=374.91 Aligned_cols=348 Identities=19% Similarity=0.383 Sum_probs=281.7
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|||+.+.+.++ ++.+.+.+.+...... ......|++..|..++|+++++++.+.+| +++++++|++
T Consensus 34 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-------~~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~i~~ 104 (398)
T 3ele_A 34 KENVYDFSIGNPSIPAPQIVNDTIKELVTDYD-------SVALHGYTSAQGDVETRAAIAEFLNNTHG--THFNADNLYM 104 (398)
T ss_dssp GGGCEECCSCCCCSCCCHHHHHHHHHHHHHSC-------HHHHHSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCCeEEeecCCCCCCCCHHHHHHHHHHHhcCC-------ccccCCcCCCCCcHHHHHHHHHHHHHHhC--CCCChHHEEE
Confidence 357899999876553 3555555444321100 00145788888999999999999998877 4578999999
Q ss_pred ecChHHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 126 TAGATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
|+|+++++..++.+++++| |.|+++.|+|..+...++. .|++++.+|++++ +|.+|+++|++++++ +++++
T Consensus 105 ~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~-~g~~~~~v~~~~~-~~~~d~~~l~~~l~~------~~~~v 176 (398)
T 3ele_A 105 TMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNA-AGARLVEVPADTE-HFQIDFDALEERINA------HTRGV 176 (398)
T ss_dssp ESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHH-TTCEEEEECCCTT-TSSCCHHHHHHTCCT------TEEEE
T ss_pred ccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHH-cCCEEEEEecCCc-CCcCCHHHHHHHhCc------CCCEE
Confidence 9999999999999999999 9999999999999999885 9999999999754 688999999998864 78999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHh------cCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcc
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATR------KNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSK 278 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~------~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK 278 (442)
++++|+||||.+++.+++++|+++|++ ||++||+||+|+++.+++........ ..+++++++|+||
T Consensus 177 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--------~~~~~i~~~s~sK 248 (398)
T 3ele_A 177 IINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTK--------YYDNTLVCYSYSK 248 (398)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGG--------TCSSEEEEEESTT
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHh--------hcCCeEEEEehhh
Confidence 999999999999999999999999999 99999999999999887644333221 1478999999999
Q ss_pred cCCCCCceeEEEeecCHH-----HHHHHHH---ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 046900 279 DLGLPGFRVGTIYSYNDK-----VVTTARR---MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGL 350 (442)
Q Consensus 279 ~~g~~G~RiG~i~~~~~~-----~~~~~~~---~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 350 (442)
.+|++|+|+||++++++. +...+.. .......+.+.|.++..++++.. .++.++++++++.+.|
T Consensus 249 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--------~~~~~~~~~~~l~~~L 320 (398)
T 3ele_A 249 SLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG--------DINAYKENRDLLYEGL 320 (398)
T ss_dssp TSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC--------CHHHHHHHHHHHHHHH
T ss_pred cCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH--------HHHHHHHHHHHHHHHH
Confidence 999999999999996652 3333322 22234567788998888887654 2456778888899999
Q ss_pred HhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHH
Q 046900 351 RSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRI 430 (442)
Q Consensus 351 ~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l 430 (442)
++.|+++..+.+++|+|++++.. +..++++.|.+ +||.+.||+.|+. ++++||+++. +++++++++++|
T Consensus 321 ~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~-~gi~v~~g~~~~~--~~~iRis~~~-~~e~i~~~l~~l 389 (398)
T 3ele_A 321 TRIGYHCFKPDGAFYMFVKALED-------DSNAFCEKAKE-EDVLIVAADGFGC--PGWVRISYCV-DREMIKHSMPAF 389 (398)
T ss_dssp HHHTCCEECCSBSSEEEEECSSS-------CHHHHHHHHHT-TTEECEESGGGTC--TTEEEEECCS-CHHHHHHHHHHH
T ss_pred HHcCCeecCCCeeEEEEEEcCCC-------CHHHHHHHHHH-CCEEEeCccccCC--CCeEEEEecC-CHHHHHHHHHHH
Confidence 88899999999999999998753 25677777755 5999999999864 5799999986 999999999999
Q ss_pred HHHHHHHH
Q 046900 431 HNFMQKRE 438 (442)
Q Consensus 431 ~~~l~~~~ 438 (442)
++++++++
T Consensus 390 ~~~l~~~~ 397 (398)
T 3ele_A 390 EKIYKKYN 397 (398)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhh
Confidence 99998764
No 21
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=2.9e-47 Score=373.84 Aligned_cols=350 Identities=22% Similarity=0.311 Sum_probs=287.2
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEEE
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~ 125 (442)
.++|+|+.+.+.++ ++.+.+.+.+.... ....|++..|..++|+++++++.+.+| .+++++ +|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~~g~~~l~~~la~~l~~~~g--~~~~~~~~v~~ 96 (386)
T 1u08_A 30 HQAINLSQGFPDFDGPRYLQERLAHHVAQ-----------GANQYAPMTGVQALREAIAQKTERLYG--YQPDADSDITV 96 (386)
T ss_dssp TTCEECCCSSCSSCCCHHHHHHHHHHHHT-----------TCCSCCCTTCCHHHHHHHHHHHHHHHS--CCCCTTTTEEE
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHHh-----------hccCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCCEEE
Confidence 36789999887653 35555555443211 134688878899999999999988776 446788 9999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++.+++++||.|+++.|+|+.+...++. .|++++.+|++.+ +|.+|++.|++.+.+ ++++|+
T Consensus 97 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~v~~~~~-~~~~d~~~l~~~l~~------~~~~v~ 168 (386)
T 1u08_A 97 TAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIAL-SGGIVKRMALQPP-HFRVDWQEFAALLSE------RTRLVI 168 (386)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHH-TTCEEEEEECCTT-TCCCCHHHHHHHCCT------TEEEEE
T ss_pred cCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHH-cCCEEEEeecCcc-cCcCCHHHHHHhhcc------cCEEEE
Confidence 99999999999999999999999999999999998884 8999999998754 578999999998853 789999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.++|.+++++|+++|++||++||+||+|+++.+++..+.++..+... .+++++++|+||.+|++|+
T Consensus 169 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-----~~~~i~~~s~sK~~~~~G~ 243 (386)
T 1u08_A 169 LNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQL-----RERAVAVSSFGKTYHMTGW 243 (386)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHH-----HTTEEEEEEHHHHTTCGGG
T ss_pred EeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCc-----cCcEEEEecchhhcCCccc
Confidence 99999999999999999999999999999999999999998876555555444321 2678999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||+++ ++.+.+.++... ..+..+++.|.++..+++.. .+++++.++.++++++++.+.|++.|+++..+++|
T Consensus 244 r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 319 (386)
T 1u08_A 244 KVGYCVA-PAPISAEIRKVHQYLTFSVNTPAQLALADMLRAE---PEHYLALPDFYRQKRDILVNALNESRLEILPCEGT 319 (386)
T ss_dssp CCEEEEC-CHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC---THHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBS
T ss_pred ceEEEEc-CHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCce
Confidence 9999999 466666665433 23567888999888888753 34678889999999999999999889998888889
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC--CCCCEEEEEeecCCHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC--SEPGWFRVCFANMSEQTLEVALKRIHN 432 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~--~~~~~iRls~~~~~~e~i~~~l~~l~~ 432 (442)
+|+|++++.... .+..++++.|++++||.+.||+.|+. ..++++||+++. +++++++++++|++
T Consensus 320 ~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 320 YFLLVDYSAVST----LDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLRQ 385 (386)
T ss_dssp SEEEEECTTTCC----SCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHTT
T ss_pred EEEEEecCCCCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-CHHHHHHHHHHHhh
Confidence 999999875310 02567888888666999999998864 246799999997 89999999999864
No 22
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.2e-47 Score=375.24 Aligned_cols=348 Identities=20% Similarity=0.257 Sum_probs=292.3
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|||+.++++++ ++.+.+.+.+.... ....|++ .| .++|+++++++++.++ ..+++++|++
T Consensus 22 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~-~~-~~lr~~la~~~~~~~~--~~~~~~~i~~ 86 (377)
T 3fdb_A 22 GQGVLPLWVAESDFSTCPAVLQAITDAVQR-----------EAFGYQP-DG-SLLSQATAEFYADRYG--YQARPEWIFP 86 (377)
T ss_dssp CTTSEECCSSCCCSCCCHHHHHHHHHHHHT-----------TCCSSCC-SS-CCHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCCeeeecccCCCCCCCHHHHHHHHHHHHc-----------CCCCCCC-CC-HHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 567899999998774 35555555443211 1356888 77 8999999999998877 4577899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++.+++++||+|+++.|+|..+...++. .|++++.+|++++ +|++.|++.+++ ++++++
T Consensus 87 t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~~~~~~~----~d~~~l~~~l~~------~~~~v~ 155 (377)
T 3fdb_A 87 IPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSA-TQREGIFIDATGG----INLHDVEKGFQA------GARSIL 155 (377)
T ss_dssp ESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHHH-HTCCEEEEECTTS----CCHHHHHHHHHT------TCCEEE
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHH-cCCEEEEccCCCC----CCHHHHHHHhcc------CCCEEE
Confidence 99999999999999999999999999999999998885 8999999998763 899999999975 678999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC-CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS-SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~-~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++ ..+.++..+... +++++++|+||.+|++|
T Consensus 156 i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~------~~~i~~~s~sK~~g~~G 229 (377)
T 3fdb_A 156 LCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAA------SVCITITAPSKAWNIAG 229 (377)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHH------HHEEEEECSTTTTTCGG
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCC------CcEEEEEeChHhccCcc
Confidence 99999999999999999999999999999999999999998877 445555444332 67899999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeecC
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA--GIECLKG 360 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~ 360 (442)
+|+||++++++.+.+.++..... +..+++.|.++.+++... .+++++.++.++++++++.+.|++. |+++..+
T Consensus 230 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 306 (377)
T 3fdb_A 230 LKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYG---TDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPM 306 (377)
T ss_dssp GCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCC
T ss_pred hhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC
Confidence 99999988677777777665432 567889999988888743 4567888999999999999999985 8999999
Q ss_pred CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 361 NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 361 ~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
++++++|++++.... ..+++..+++++||.+.||+.|+...++++||+++. +++++++++++|++++++
T Consensus 307 ~~~~~~~~~~~~~~~------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 307 QATYLMWIDFRDTTI------EGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp SBCSEEEEECTTSCC------CSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHTT
T ss_pred CeeEEEEEECcccCC------CHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhh
Confidence 999999999986321 135677777777999999999986667899999998 899999999999998764
No 23
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=3.8e-47 Score=377.79 Aligned_cols=328 Identities=16% Similarity=0.263 Sum_probs=268.8
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccC-------CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFD-------LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL 161 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-------~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~ 161 (442)
.+|++..|+++||+++++++.+.+| ...+ +++|++|+|+++++.+++.+++++||.|++++|+|+.+...+
T Consensus 72 ~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~ 149 (425)
T 2r2n_A 72 LQYSPSAGIPELLSWLKQLQIKLHN--PPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSL 149 (425)
T ss_dssp TSCCCTTCCHHHHHHHHHHHHHHHC--CTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhcC--CCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHH
Confidence 5799999999999999999998877 3332 369999999999999999999999999999999999999998
Q ss_pred hhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh------cCCceeEEEE-eCCCCCCCcCCCHHHHHHHHHHHHhcCc
Q 046900 162 RWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES------KDMRVRGVLI-TNPSNPLGATIQRSVLEELLDFATRKNI 234 (442)
Q Consensus 162 ~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~------~~~~~~~v~l-~~P~NPtG~~~~~~~l~~l~~~~~~~~~ 234 (442)
+. .|++++.+|++++ .+|++.|++.++++.. .+.++++|++ ++||||||.+++.+++++|+++|++||+
T Consensus 150 ~~-~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~ 225 (425)
T 2r2n_A 150 HP-LGCNIINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225 (425)
T ss_dssp GG-GTCEEEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HH-cCCEEEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCC
Confidence 84 8999999998753 3899999999863210 0135787766 5899999999999999999999999999
Q ss_pred EEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc--cCCCcH
Q 046900 235 HLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS--FTLISS 312 (442)
Q Consensus 235 ~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~ 312 (442)
+||+||+|+++.|++..+.++.++.. .+++++++||||.++ +|+|+||++++ +.+.+.+..... .+..++
T Consensus 226 ~li~De~~~~~~~~g~~~~~~~~~~~------~~~~i~~~s~SK~~~-~GlRiG~~~~~-~~l~~~l~~~~~~~~~~~~~ 297 (425)
T 2r2n_A 226 LIIEDDPYYFLQFNKFRVPTFLSMDV------DGRVIRADSFSKIIS-SGLRIGFLTGP-KPLIERVILHIQVSTLHPST 297 (425)
T ss_dssp EEEEECTTGGGBSSSSCCCCTGGGCT------TSCEEEEEESTTTTC-STTCCEEEEEE-HHHHHHHHHHHHTTTCSSCH
T ss_pred EEEEECCcccccCCCCCCCCccccCC------CCCEEEEccchhhcc-CccceEEEecC-HHHHHHHHHHHHHhcCCCCH
Confidence 99999999999887765666665533 378999999999998 99999999995 556666554332 366789
Q ss_pred HHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHHHHHHHhC--CC-eeecCCceEEEEEecCCcccccChhhHHH-HH
Q 046900 313 QTQYLLASMLSNK--KFTENYIKTNRERLQKRYQMIIEGLRSA--GI-ECLKGNAGLFCWMNLSPLLEEQTREGELA-LW 386 (442)
Q Consensus 313 ~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-l~ 386 (442)
+.|.++.++++.. +...++++++++.++++++.+.+.|++. |+ .+..|.+|+|+|++++.... ..+ +.
T Consensus 298 ~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~------~~~~~~ 371 (425)
T 2r2n_A 298 FNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGIND------VKELIE 371 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSC------CHHHHH
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCC------HHHHHH
Confidence 9999999998862 1235778899999999999999999884 66 46678999999999986422 234 45
Q ss_pred HHHHHcCcEEEeCCCCCCCC---CCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 387 DSMLHEVKLNISPGSSCHCS---EPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 387 ~~l~~~~gi~v~pg~~f~~~---~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+.|. ++||.+.||+.|+.. ..+++||+++..+++++++++++|++++++.
T Consensus 372 ~~l~-~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 372 EKAV-KMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp THHH-HTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 5554 459999999998753 2579999998448999999999999998653
No 24
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=6.9e-47 Score=371.35 Aligned_cols=355 Identities=18% Similarity=0.357 Sum_probs=289.7
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.+++.++ ++.+.+.+.+.... ....|++..|..++|+++++++++.+| .++++++|++
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~v~~ 95 (388)
T 1j32_A 29 GIDVCSFSAGEPDFNTPKHIVEAAKAALEQ-----------GKTRYGPAAGEPRLREAIAQKLQRDNG--LCYGADNILV 95 (388)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHHT-----------TCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEEE
Confidence 456799999988663 34455444433210 124688888999999999999998776 4467889999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++++++++||+|++++|+|+.+...++. .|++++.++++++++|.+|++.|++.+++ ++++|+
T Consensus 96 ~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 168 (388)
T 1j32_A 96 TNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKL-AEGTPVILPTTVETQFKVSPEQIRQAITP------KTKLLV 168 (388)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHH-TTCEEEEECCCGGGTTCCCHHHHHHHCCT------TEEEEE
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH-cCCEEEEecCCcccCCCCCHHHHHHhcCc------CceEEE
Confidence 99999999999999999999999999999999998885 89999999987655688999999998864 789999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++..+.++..+..+. .+++++++|+||.+|++|+
T Consensus 169 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~sK~~~~~G~ 244 (388)
T 1j32_A 169 FNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEA----YERSVVCSGFAKTYAMTGW 244 (388)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHH----HHTEEEEEESTTTTTCTTT
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccc----cCCEEEEeechhccCCccc
Confidence 999999999999999999999999999999999999999988765555554442210 2568999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNA 362 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 362 (442)
|+||+++ ++.+.+.+..... .+..+++.|.++.++++.. .+++++.++.++++++++.+.|++. |+++..+.+
T Consensus 245 r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 320 (388)
T 1j32_A 245 RVGFLAG-PVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENS---QDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDG 320 (388)
T ss_dssp CCEEEEC-CHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCB
T ss_pred ceEEEEe-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCe
Confidence 9999998 5666666654332 3567788998888888743 3457788899999999999999987 888888899
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
++++|++++... .+..++++.|++++||.+.||..|+. ++++||+++. +++++++++++|++++++.
T Consensus 321 ~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~-~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 321 AFYMFPSIAKTG-----RSSLDFCSELLDQHQVATVPGAAFGA--DDCIRLSYAT-DLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp TTEECCBCGGGT-----CCHHHHHHHHHHHHCEECEEGGGGTC--TTBEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCC-----CCHHHHHHHHHHhCCEEEeChhhhCC--CCcEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 999999886410 02567888888745999999998864 5789999997 8999999999999998764
No 25
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=3.3e-47 Score=378.77 Aligned_cols=363 Identities=19% Similarity=0.275 Sum_probs=292.9
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEEE
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIVV 125 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~ 125 (442)
.++|+|+.+.+.++ ++.+.+.+.+...... .....|++..|..++|+++++++.+.+| .+++++ +|++
T Consensus 37 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~~~y~~~~g~~~l~~~la~~l~~~~g--~~~~~~~~v~~ 106 (429)
T 1yiz_A 37 YKPLNLGQGFPDYHAPKYALNALAAAANSPD--------PLANQYTRGFGHPRLVQALSKLYSQLVD--RTINPMTEVLV 106 (429)
T ss_dssp HCCEECCSSSCSSCCCHHHHHHHHHHHTCSC--------GGGGSCCCSSCCHHHHHHHHHHHHHHHT--SCCCTTTSEEE
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhccc--------cCccCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCcCCEEE
Confidence 46799999987653 3555555544321100 1245788888899999999999988776 446788 9999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCC--------CCcCCHHHHHHHHHHHHhc
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSN--------NFQITPQALEAAYKEAESK 197 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~--------~~~~d~~~l~~~l~~~~~~ 197 (442)
|+|+++++..++++++++||.|+++.|+|+.+...++. .|++++.+|++.++ +|.+|++.|++.+++
T Consensus 107 ~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~---- 181 (429)
T 1yiz_A 107 TVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKA-AGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE---- 181 (429)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHH-TTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCT----
T ss_pred ecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH-cCCEEEEEeCCcccccccccccCcccCHHHHHHHhcc----
Confidence 99999999999999999999999999999999998884 89999999987653 578999999998853
Q ss_pred CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCc
Q 046900 198 DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLS 277 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~S 277 (442)
++++|++++|+||||.++|.+++++|+++|++||++||+||+|.++.+++..+.++..+.. ..++++++.|+|
T Consensus 182 --~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~s~s 254 (429)
T 1yiz_A 182 --KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG-----MWERTITIGSAG 254 (429)
T ss_dssp --TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTT-----TGGGEEEEEEHH
T ss_pred --CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccC-----CcCceEEEecch
Confidence 7899999999999999999999999999999999999999999999887655555544421 136789999999
Q ss_pred ccCCCCCceeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHHHhcC-----chhHHHHHHHHHHHHHHHHHHHHHHH
Q 046900 278 KDLGLPGFRVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLASMLSN-----KKFTENYIKTNRERLQKRYQMIIEGL 350 (442)
Q Consensus 278 K~~g~~G~RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~l~~~L 350 (442)
|.+|++|+|+||+++ ++.+.+.+.... ..+..+++.|.++.++++. ..+ .+++++.++.++++++.+.+.|
T Consensus 255 K~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L 332 (429)
T 1yiz_A 255 KTFSLTGWKIGWAYG-PEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSP-ECYFNSISGELMAKRDYMASFL 332 (429)
T ss_dssp HHHTCGGGCCEEEES-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTST-TSHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCCCcceEEEEe-CHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccch-HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 466666665432 2456788999998888876 322 4567888999999999999999
Q ss_pred HhCCCeeecCCceEEEEEecCCccc------ccChhhHHHHHHHHHHcCcEEEeCCCCCCCC-----CCCEEEEEeecCC
Q 046900 351 RSAGIECLKGNAGLFCWMNLSPLLE------EQTREGELALWDSMLHEVKLNISPGSSCHCS-----EPGWFRVCFANMS 419 (442)
Q Consensus 351 ~~~g~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~-----~~~~iRls~~~~~ 419 (442)
++.|+++..+.+|+|+|++++.... .....+..++++.|++++||.+.||+.|+.. .++++||+++. +
T Consensus 333 ~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~ 411 (429)
T 1yiz_A 333 AEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK-K 411 (429)
T ss_dssp HHHTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCS-C
T ss_pred HhCCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecC-C
Confidence 9889998888899999999976310 0000135678888886669999999888642 25799999997 8
Q ss_pred HHHHHHHHHHHHHHHH
Q 046900 420 EQTLEVALKRIHNFMQ 435 (442)
Q Consensus 420 ~e~i~~~l~~l~~~l~ 435 (442)
++++++++++|+++++
T Consensus 412 ~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 412 DENLQKAAEILRKWKG 427 (429)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999998764
No 26
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=8.1e-47 Score=369.94 Aligned_cols=353 Identities=16% Similarity=0.238 Sum_probs=293.6
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|+|+.+++.++ ++.+.+.+.+.... ....|++. ..++++++++++.+.++ .++++++|++
T Consensus 23 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~--~~~~~~~l~~~l~~~~g--~~~~~~~v~~ 87 (383)
T 3kax_A 23 NEELIHAWIADMDFEVPQPIQTALKKRIEH-----------PIFGYTLP--PENIGDIICNWTKKQYN--WDIQKEWIVF 87 (383)
T ss_dssp SSCCEECCCSSCSSCCCHHHHHHHHHHHHS-----------CCCCCCCC--CTTHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCCeeecccccCCCCCCHHHHHHHHHHHhc-----------CCCCCCCC--CHHHHHHHHHHHHHHhC--CCCChhhEEE
Confidence 357899999988774 35555555543211 13456654 57999999999998876 4467899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCC-CCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS-NNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
|+|+++++.+++.+++++||+|+++.|+|..+...++. .|++++.++++.+ +.|.+|++.|++.+.. +++++
T Consensus 88 ~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v 160 (383)
T 3kax_A 88 SAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEMVTT-NNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ------GVKLM 160 (383)
T ss_dssp ESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHHHHH-TTCEEEECCCEEETTEEECCHHHHHHHHTT------TCCEE
T ss_pred cCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHH-cCCEEEeccceecCCcEEEcHHHHHHHhCc------CCeEE
Confidence 99999999999999999999999999999999998884 9999999998753 3488999999999843 78999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++..+.++..+..+. .+++++++|+||.+|++|
T Consensus 161 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~----~~~~i~~~s~sK~~~~~G 236 (383)
T 3kax_A 161 LLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEEL----AARTITCMAPSKTFNIAG 236 (383)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHH----HTTEEEEECSHHHHTCGG
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccc----cCcEEEEEEChhhccCcc
Confidence 9999999999999999999999999999999999999999988776555665553320 278899999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccc---cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeec
Q 046900 285 FRVGTIYSYNDKVVTTARRMSS---FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA--GIECLK 359 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~ 359 (442)
+|+||++++++.+.+.++.... .+..+++.|.++.+++... .+++++.++.++++++++.+.|++. |+++..
T Consensus 237 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 313 (383)
T 3kax_A 237 LQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTEC---NDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMK 313 (383)
T ss_dssp GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTC---HHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECC
T ss_pred hhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEec
Confidence 9999999866777776654432 3467889999998888863 4567888999999999999999884 899999
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+.+++++|++++.... +..++++.|++++||.+.||+.|+...++++||+++. +++++++++++|++++
T Consensus 314 ~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 314 PEGSFLLWIDCSALNL-----SQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGC-PRSVLEEILNRLRHTF 382 (383)
T ss_dssp CSBSSEEEEECGGGCC-----CHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSS-CHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEccccCC-----CHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 9999999999875211 3678889998666999999999987667999999997 8999999999999876
No 27
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=5.9e-47 Score=375.38 Aligned_cols=364 Identities=19% Similarity=0.350 Sum_probs=287.8
Q ss_pred CCCceeeeecccc----cc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHh----CCCC
Q 046900 46 NPSGVIQMGLAEN----QV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIR----GGRA 116 (442)
Q Consensus 46 ~~~~~i~l~~~~n----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~----~~~~ 116 (442)
++.++|+|+.+.+ .+ +++.+.+.+.+.... .....|++..|..++|+++|+++++.+ ..++
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~ 100 (416)
T 1bw0_A 31 SPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDS----------QECNGYFPTVGSPEAREAVATWWRNSFVHKEELKS 100 (416)
T ss_dssp SCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHT----------TCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGG
T ss_pred cCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhC----------CccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCC
Confidence 3467899999864 22 345555555443211 013568887899999999999998422 1124
Q ss_pred ccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 117 KFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 117 ~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
++++++|++|+|+++++.+++.+++++||.|+++.|+|+.+...++. .|++++.++++++++|.+|++.|++.+++
T Consensus 101 ~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--- 176 (416)
T 1bw0_A 101 TIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKA-YGIGMHFYNCRPENDWEADLDEIRRLKDD--- 176 (416)
T ss_dssp GCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHH-TTCEEEEEEEEGGGTTEECHHHHHHHCCT---
T ss_pred CCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHH-cCcEEEEeecCcccCCCCCHHHHHHHhcc---
Confidence 56789999999999999999999999999999999999999998884 89999999987655688999999998864
Q ss_pred cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC----CcccHHHHHhhhcCCCCCcEEE
Q 046900 197 KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS----EFVSIAEILEARQYKDSERVHI 272 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~----~~~s~~~~~~~~~~~~~~~vi~ 272 (442)
+++++++++|+||||.+++.+++++|+++|++||++||+||+|.++.+++. .+.++..+.. .+++++
T Consensus 177 ---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~------~~~~i~ 247 (416)
T 1bw0_A 177 ---KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFET------TVPRVI 247 (416)
T ss_dssp ---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCC------SCCEEE
T ss_pred ---CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccC------CCcEEE
Confidence 678999999999999999999999999999999999999999999888765 3444433322 356899
Q ss_pred EecCcccCCCCCceeEEEeecCH-----HHHHHHHHcc-ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH
Q 046900 273 VYSLSKDLGLPGFRVGTIYSYND-----KVVTTARRMS-SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMI 346 (442)
Q Consensus 273 ~~S~SK~~g~~G~RiG~i~~~~~-----~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 346 (442)
++|+||.|+++|+|+||++++++ .+...++... ..+..+++.|.++.++++... ..++++.++.++++++++
T Consensus 248 ~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l 325 (416)
T 1bw0_A 248 LGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTP--QEHLDQIVAKIEESAMYL 325 (416)
T ss_dssp EEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSC--HHHHHHHHHHHHHHHHHH
T ss_pred EecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHH
Confidence 99999999899999999998664 2332333322 245678999999999988532 456778888999999999
Q ss_pred HHHHHhC-CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHH
Q 046900 347 IEGLRSA-GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEV 425 (442)
Q Consensus 347 ~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~ 425 (442)
.+.|++. |+.+..+.+|+|+|++++...- ....+..+++..|++++||.+.||+.|+. ++++||+++. +++++++
T Consensus 326 ~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~iRis~~~-~~e~l~~ 401 (416)
T 1bw0_A 326 YNHIGECIGLAPTMPRGAMYLMSRIDLEKY-RDIKTDVEFFEKLLEEENVQVLPGTIFHA--PGFTRLTTTR-PVEVYRE 401 (416)
T ss_dssp HHHHTTSTTEEECCCCBTTEEEEEECGGGB-SSCCSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECCS-CHHHHHH
T ss_pred HHHHHhCCCCcccCCCeeEEEEEeCCHHHc-CCCCCHHHHHHHHHHHCCEEEecccccCC--CCeEEEEecC-CHHHHHH
Confidence 9999987 8888778889999998863100 00013567888887555999999998863 5799999986 8999999
Q ss_pred HHHHHHHHHHHHH
Q 046900 426 ALKRIHNFMQKRE 438 (442)
Q Consensus 426 ~l~~l~~~l~~~~ 438 (442)
++++|.+++++++
T Consensus 402 ~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 402 AVERIKAFCQRHA 414 (416)
T ss_dssp HHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998754
No 28
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.5e-46 Score=371.97 Aligned_cols=364 Identities=18% Similarity=0.306 Sum_probs=294.0
Q ss_pred Cceeeeeccccc---ccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCc-cCCCcE
Q 046900 48 SGVIQMGLAENQ---VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK-FDLNRI 123 (442)
Q Consensus 48 ~~~i~l~~~~n~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~~~i 123 (442)
+++|||+.+.+. ++++.+.+.+.+...... .....|++..|..++|+++|+++.+++| .+ +++++|
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~--------~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~~v 112 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEY--------HYTLQYSTTEGDPVLKQQILKLLERMYG--ITGLDEDNL 112 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSH--------HHHTSCCCTTCCHHHHHHHHHHHHHHHC--CCSCCGGGE
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcc--------hhhcCCCCCCCCHHHHHHHHHHHHhccC--CCCCCcccE
Confidence 468999887542 255666655544321100 0135688888999999999999977655 44 568899
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc--CCce
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK--DMRV 201 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~--~~~~ 201 (442)
++|+|+++++.+++.+++++||.|+++.|+|..+...+.. .|++++.+|++++ .+|++.|++.+++...+ +.++
T Consensus 113 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~ 188 (425)
T 1vp4_A 113 IFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQ-YLANFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQV 188 (425)
T ss_dssp EEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHT-TTCEEEEEEEETT---EECHHHHHHHHHHHHHTTCGGGE
T ss_pred EEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHH-cCCEEEEeccCCC---CCCHHHHHHHHHhhhhcccCCCc
Confidence 9999999999999999999999999999999999998884 8999999998764 28999999999753211 1267
Q ss_pred eEE-EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccC
Q 046900 202 RGV-LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDL 280 (442)
Q Consensus 202 ~~v-~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~ 280 (442)
++| ++++|+||||.+++.+++++|+++|+++|++||+||+|+++.+++..+.++..+.. .+++++++||||.+
T Consensus 189 ~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~------~~~~i~~~s~sK~~ 262 (425)
T 1vp4_A 189 KFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGG------PERVVLLNTFSKVL 262 (425)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHC------TTTEEEEEESTTTT
T ss_pred eEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCC------CCCEEEEecccccc
Confidence 887 57899999999999999999999999999999999999999887766667777653 36889999999999
Q ss_pred CCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-----
Q 046900 281 GLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA----- 353 (442)
Q Consensus 281 g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----- 353 (442)
| +|+|+||++++ +.+.+.+...... +..+++.|.++.++++...+ ++++++.++.++++++.+.+.|++.
T Consensus 263 ~-~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 339 (425)
T 1vp4_A 263 A-PGLRIGMVAGS-KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDL-LEQLKPTIELYRRKRTVMLNALEEYFSDIP 339 (425)
T ss_dssp C-GGGCEEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCH-HHHTHHHHHHHHHHHHHHHHHHHHHSTTST
T ss_pred c-cccceEEEeeC-HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9 99999999995 6666666543322 45688999999999986533 5678888999999999999999875
Q ss_pred CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC--CCCEEEEEeecCCHHHHHHHHHHHH
Q 046900 354 GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS--EPGWFRVCFANMSEQTLEVALKRIH 431 (442)
Q Consensus 354 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~--~~~~iRls~~~~~~e~i~~~l~~l~ 431 (442)
|+++..+.+|+|+|++++...+ ..++++.|+++ ||.+.||+.|+.. .++++||+++..+++++++++++|+
T Consensus 340 g~~~~~~~~g~~~~~~~~~~~~------~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~ 412 (425)
T 1vp4_A 340 GVKWVKSEGGLFIWLTLPEGFD------TWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLR 412 (425)
T ss_dssp TCEECCCSBSSEEEEECCTTCC------TTTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHH
T ss_pred ceEEecCCccEEEEEEcCCCCC------HHHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHH
Confidence 6888778889999999985322 34678888888 9999999988643 3579999998657899999999999
Q ss_pred HHHHHHHhhc
Q 046900 432 NFMQKRERRR 441 (442)
Q Consensus 432 ~~l~~~~~~~ 441 (442)
+++++..+.+
T Consensus 413 ~~l~~~~~~~ 422 (425)
T 1vp4_A 413 EVVLEYGKEK 422 (425)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhhc
Confidence 9998876653
No 29
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.7e-46 Score=368.76 Aligned_cols=345 Identities=25% Similarity=0.432 Sum_probs=285.9
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.+++.++ ++.+.+.+.+.... ....|++..|..++|+++|+|+.+.+| +++++++|++
T Consensus 40 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~~g~~~lr~~la~~~~~~~g--~~~~~~~v~~ 106 (389)
T 1o4s_A 40 GEDVINLTAGEPDFPTPEPVVEEAVRFLQK-----------GEVKYTDPRGIYELREGIAKRIGERYK--KDISPDQVVV 106 (389)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHTT-----------CCCCCCCTTCCHHHHHHHHHHHHHHHT--CCCCGGGEEE
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 356799999988754 35555555443211 124688778899999999999988776 4457899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++..++.+++++||.|+++.|+|+.+...++. .|++++.+|++++++|.+|+++|++.+++ ++++|+
T Consensus 107 ~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 179 (389)
T 1o4s_A 107 TNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIIL-AGGTVNVVETFMSKNFQPSLEEVEGLLVG------KTKAVL 179 (389)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHH-TTCEEEEEECCGGGTTCCCHHHHHHTCCT------TEEEEE
T ss_pred ecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHH-cCCEEEEEecCCccCCCCCHHHHHHhccc------CceEEE
Confidence 99999999999999999999999999999999998885 89999999987655788999999998764 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++ .+.++..+.. ..+++++++|+||.+|++|+
T Consensus 180 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G~ 253 (389)
T 1o4s_A 180 INSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSE-----GFDRIVYINGFSKSHSMTGW 253 (389)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCS-----SSTTEEEEEESTTTTTCGGG
T ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCC-----CCCcEEEEeechhhcCCccc
Confidence 99999999999999999999999999999999999999988865 3456666532 13678999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||+++ ++.+.+.+..... .+..+++.|.++.++++.. +++.++.++++++++.+.|++.|+++..+.+|
T Consensus 254 r~G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 326 (389)
T 1o4s_A 254 RVGYLIS-SEKVATAVSKIQSHTTSCINTVAQYAALKALEVD------NSYMVQTFKERKNFVVERLKKMGVKFVEPEGA 326 (389)
T ss_dssp CCEEEEC-CHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC------CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBS
T ss_pred ceEEEEe-CHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhcCCeeecCCcc
Confidence 9999999 5666666654432 3567888999988888764 35677888899999999999888888888899
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|+|++++ . +..++++.|++++||.+.||+.|+. ++++||+++. +++++++++++|.++++
T Consensus 327 ~~~~~~~~--~------~~~~l~~~l~~~~gi~v~~g~~f~~--~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 327 FYLFFKVR--G------DDVKFCERLLEEKKVALVPGSAFLK--PGFVRLSFAT-SIERLTEALDRIEDFLN 387 (389)
T ss_dssp SEEEEECS--S------CHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCC--C------CHHHHHHHHHHHCCEEEeCchhcCC--CCeEEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 99999987 1 2568888888444999999998864 4699999997 89999999999998874
No 30
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=9.3e-47 Score=370.53 Aligned_cols=357 Identities=16% Similarity=0.227 Sum_probs=296.0
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|||+.+++.++ ++.+.+.+.+.... ....|++. ..++++++++++.+.++ .++++++|++
T Consensus 26 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~--~~~l~~~la~~l~~~~g--~~~~~~~i~~ 90 (391)
T 3dzz_A 26 KEKELPMWIAEMDFKIAPEIMASMEEKLKV-----------AAFGYESV--PAEYYKAVADWEEIEHR--ARPKEDWCVF 90 (391)
T ss_dssp CTTCEECCSSCCSSCCCHHHHHHHHHHHTT-----------CCCCCBCC--CHHHHHHHHHHHHHHHS--CCCCGGGEEE
T ss_pred CCCceeccccCCCCCCCHHHHHHHHHHHhc-----------CcCCCCCC--CHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 347899999987764 35555555544321 13457655 58999999999999877 4467899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC-CCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD-SSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
|+|+++++.+++.+++++||+|+++.|+|..+...++. .|++++.+|++ +++.|.+|++.|++++++ .++++|
T Consensus 91 ~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~~v 164 (391)
T 3dzz_A 91 ASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEG-NGRRVISSDLIYENSKYSVNWADLEEKLAT-----PSVRMM 164 (391)
T ss_dssp ESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHHH-TTCEEEECCCEEETTEEECCHHHHHHHHTS-----TTEEEE
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHHH-cCCEEEEeeeeecCCceeecHHHHHHHHhc-----cCceEE
Confidence 99999999999999999999999999999999999884 99999999986 456688999999999862 278999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++..+.++..+... ..++++++.|+||.+|++|
T Consensus 165 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~----~~d~~i~~~s~sK~~g~~G 240 (391)
T 3dzz_A 165 VFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWD----AKNWVVSLISPSKTFNLAA 240 (391)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTT----TGGGEEEEECSHHHHTCTT
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCcc----ccCcEEEEEeChhhccccc
Confidence 999999999999999999999999999999999999999998877656666555321 1368999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHc---cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeec
Q 046900 285 FRVGTIYSYNDKVVTTARRM---SSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA--GIECLK 359 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~---~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~ 359 (442)
+|+||++++++.+.+.+... ...+..+++.|.++..++... .+++++.++.++++++++.+.|++. |+++..
T Consensus 241 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 317 (391)
T 3dzz_A 241 LHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG---HDWLRELKQVLRDNFAYAREFLAKEVPEVKVLD 317 (391)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECC
T ss_pred hhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec
Confidence 99999999657777776654 234567888888888877642 4567888999999999999999984 899999
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+.+++++|++++.... +..++++.|++++||.+.||+.|+...++++||+++. +++++++++++|+++++++
T Consensus 318 ~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 318 SNASYLAWVDISALGM-----NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLAC-PKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp CCBSSEEEEECGGGCS-----CHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHTC
T ss_pred cCceEEEEEehhhcCC-----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 9999999999875211 2678889987445999999999987667899999997 8999999999999998764
No 31
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=2.1e-46 Score=370.30 Aligned_cols=355 Identities=24% Similarity=0.388 Sum_probs=287.9
Q ss_pred CCceeeeecccc---ccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCc
Q 046900 47 PSGVIQMGLAEN---QVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNR 122 (442)
Q Consensus 47 ~~~~i~l~~~~n---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~ 122 (442)
+.++|+|+.+.+ .++ ++.+.+.+.+.... ....|++..|..++|+++++|+++.++ +++++++
T Consensus 37 g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~~g~~~l~~~la~~l~~~~g--~~~~~~~ 103 (406)
T 1xi9_A 37 GIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKE-----------GHNYYGDSEGLPELRKAIVEREKRKNG--VDITPDD 103 (406)
T ss_dssp TCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHT-----------TCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGG
T ss_pred CCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCcHHHHHHHHHHHHHhcC--CCCCHHH
Confidence 456799999988 443 24444444332210 123688878899999999999998776 4577899
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
|++|+|+++++.+++.+++++||.|++++|+|+.+...++. .|++++.+|++++++|.+|++.|++.+++ +++
T Consensus 104 v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~ 176 (406)
T 1xi9_A 104 VRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKF-YGGKPVEYRTIEEEDWQPDIDDIRKKITD------RTK 176 (406)
T ss_dssp EEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHH-TTCEEEEEEEEGGGTSEECHHHHHHHCCT------TEE
T ss_pred EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHH-cCCEEEEeecCCCcCCcCCHHHHHHhhCc------Cce
Confidence 99999999999999999999999999999999999998884 89999999987655788999999998864 789
Q ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCc-EEEEecCcccCC
Q 046900 203 GVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSER-VHIVYSLSKDLG 281 (442)
Q Consensus 203 ~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~-vi~~~S~SK~~g 281 (442)
+|++++|+||||.+++.+++++|+++|+++|++||+||+|+++.+++ .+.++..+. .++ +++++|+||.+|
T Consensus 177 ~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-------~~~~~i~~~s~sK~~~ 248 (406)
T 1xi9_A 177 AIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-------KDVPVIVMNGLSKVYF 248 (406)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-------SSSCEEEEEESTTTTC
T ss_pred EEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-------CCceEEEEeccccccC
Confidence 99999999999999999999999999999999999999999988843 345665552 267 899999999999
Q ss_pred CCCceeEEEe--ecCH---HHHHHHHHcccc-CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 046900 282 LPGFRVGTIY--SYND---KVVTTARRMSSF-TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-G 354 (442)
Q Consensus 282 ~~G~RiG~i~--~~~~---~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 354 (442)
++|+|+||++ ++++ .+.+.+...... +..+++.|.++.++++.. .+++++.++.++++++++.+.|++. |
T Consensus 249 ~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~ 325 (406)
T 1xi9_A 249 ATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGP---MDYLKEYMKKLKERRDYIYKRLNEIPG 325 (406)
T ss_dssp CGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC---CHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred CCccEEEEEEEecCchhHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999 7541 555555543322 667888999999888643 2246778899999999999999987 8
Q ss_pred CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 355 IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 355 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+++..+.+|+|+|++++.... .+..++++.|++++||.+.||..|+...++++||+++. +++++++++++|++++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~-~~~~i~~~~~~l~~~l 400 (406)
T 1xi9_A 326 ISTTKPQGAFYIFPKIEVGPW----KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLP-PIEILEEAMDRFEKFM 400 (406)
T ss_dssp EECCCCCBSSEECCEECSCSC----SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred CeeecCCeeEEEEEecCccCC----CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecC-CHHHHHHHHHHHHHHH
Confidence 888888899999998874110 12568888888445999999998875446799999995 9999999999999998
Q ss_pred HHH
Q 046900 435 QKR 437 (442)
Q Consensus 435 ~~~ 437 (442)
++.
T Consensus 401 ~~~ 403 (406)
T 1xi9_A 401 KER 403 (406)
T ss_dssp HHC
T ss_pred HHH
Confidence 764
No 32
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=6.3e-47 Score=378.97 Aligned_cols=354 Identities=19% Similarity=0.254 Sum_probs=285.0
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|+|+++++.++ ++.+.+.+.+....... ......|++..|..+||+++++|+. ++ +.+++++|++
T Consensus 68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~------~~~~~~y~~~~g~~~lr~~ia~~~~--~g--~~~~~~~i~~ 137 (449)
T 3qgu_A 68 DAKIISLGIGDTTEPLPKYIADAMAKAAAGLAT------REGYSGYGAEQGQGALREAVASTFY--GH--AGRAADEIFI 137 (449)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGG------SCCCCCSTTTTCCHHHHHHHHHHHH--TT--TTCCGGGEEE
T ss_pred CCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhcc------ccCCCCCCCCCCcHHHHHHHHHHHH--cC--CCCCHHHEEE
Confidence 457899999988764 34444444433211000 0123578888899999999999997 44 4578899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcE----------EEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIK----------IVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~----------v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
|+|+++++..+ .+++++||.|++++|+|..+...++. .|++ ++.++++.++++..|++.+
T Consensus 138 t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 207 (449)
T 3qgu_A 138 SDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVM-MGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-------- 207 (449)
T ss_dssp ESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHH-HTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC--------
T ss_pred ccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHH-cCCcccccccccceeEEEecccccCCcCChhHc--------
Confidence 99999999999 88889999999999999999999885 8988 9999998776777776432
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEec
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYS 275 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S 275 (442)
.++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++..+.++..+... .++++++.|
T Consensus 208 ---~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~s 279 (449)
T 3qgu_A 208 ---KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGA-----DEVAIETCS 279 (449)
T ss_dssp ---CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTG-----GGTEEEEEE
T ss_pred ---CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCC-----CCcEEEEec
Confidence 278899999999999999999999999999999999999999999998876555555554322 367899999
Q ss_pred CcccCCCCCceeEEEeecCHHHH-------HHHHHc--cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH
Q 046900 276 LSKDLGLPGFRVGTIYSYNDKVV-------TTARRM--SSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMI 346 (442)
Q Consensus 276 ~SK~~g~~G~RiG~i~~~~~~~~-------~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 346 (442)
|||.+|++|+|+||++++++.+. ..+... ..++..+++.|.++.+++.+.. .++++++++.++++++++
T Consensus 280 ~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l 357 (449)
T 3qgu_A 280 FSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEG--LKEMNAMIKFYKENAQIL 357 (449)
T ss_dssp CSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHH--HHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999654332 123222 2334678899999999888632 356888999999999999
Q ss_pred HHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHH
Q 046900 347 IEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVA 426 (442)
Q Consensus 347 ~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~ 426 (442)
.+.|++.|+++..+++++|+|++++ .. +..++++.|++++||.+.||+.|+..+++++||++.. ++++++++
T Consensus 358 ~~~L~~~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~ 429 (449)
T 3qgu_A 358 KTTFTEMGFSVYGGDDAPYIWVGFP-GK------PSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEA 429 (449)
T ss_dssp HHHHHHTTCCEEESSSSSEEEEECT-TS------CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHH
T ss_pred HHHHHHCCCeeeCCCCeeEEEEECC-CC------CHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHH
Confidence 9999999999999999999999998 22 2678888888877999999999987667899999987 89999999
Q ss_pred HHHHHHHHHHHH
Q 046900 427 LKRIHNFMQKRE 438 (442)
Q Consensus 427 l~~l~~~l~~~~ 438 (442)
+++|++++++..
T Consensus 430 l~~l~~~~~~~~ 441 (449)
T 3qgu_A 430 VRRFKEAYGKRN 441 (449)
T ss_dssp HHHHHHHHC---
T ss_pred HHHHHHHHHhcC
Confidence 999999987643
No 33
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.8e-47 Score=374.38 Aligned_cols=356 Identities=20% Similarity=0.319 Sum_probs=288.0
Q ss_pred ceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC-cEEEe
Q 046900 49 GVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN-RIVVT 126 (442)
Q Consensus 49 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~t 126 (442)
++|+|+.+.+.++ ++.+.+.+.+.... ....|++..|..++|+++++++.+.+| .+++++ +|++|
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~~v~~t 92 (411)
T 2o0r_A 26 GAVNLGQGFPDEDGPPKMLQAAQDAIAG-----------GVNQYPPGPGSAPLRRAIAAQRRRHFG--VDYDPETEVLVT 92 (411)
T ss_dssp TCEESSCSSCSSCCCHHHHHHHHHHHHT-----------TCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEEEE
T ss_pred CeeeccCcCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCCHHHHHHHHHHHHHHcC--CCCCCCceEEEe
Confidence 5789999887653 35555555443211 134688888899999999999998776 446787 99999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCC-CCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS-NNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
+|+++++.+++.+++++||.|+++.|+|+.+...+.. .|++++.+|++++ ++|.+|++.|++.+++ ++++|+
T Consensus 93 ~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 165 (411)
T 2o0r_A 93 VGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAM-AGAHRVTVPLVPDGRGFALDADALRRAVTP------RTRALI 165 (411)
T ss_dssp EHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHH-TTCEEEEEECEEETTEEECCHHHHHHHCCT------TEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHH-cCCEEEEeeccccccCCCCCHHHHHHhhcc------CceEEE
Confidence 9999999999999999999999999999999998884 8999999998754 3577999999998864 789999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.+++++|+++|+++|++||+||+|+++.+++..+.++..+... .++++++.|+||.+|++|+
T Consensus 166 l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-----~~~~i~~~s~sK~~~~~G~ 240 (411)
T 2o0r_A 166 INSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGM-----AERTITISSAAKMFNCTGW 240 (411)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTT-----GGGEEEEEEHHHHTTCTTT
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCC-----CCCEEEEeechhhcCCccc
Confidence 99999999999999999999999999999999999999988876555555444221 3678999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||+++ ++.+.+.+..... .+..+++.|.++..+++.. .+++++.++.++++++++.+.|++.|+++..+++|
T Consensus 241 r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 316 (411)
T 2o0r_A 241 KIGWACG-PAELIAGVRAAKQYLSYVGGAPFQPAVALALDTE---DAWVAALRNSLRARRDRLAAGLTEIGFAVHDSYGT 316 (411)
T ss_dssp CEEEEEC-CHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCCBS
T ss_pred eEEEEee-CHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHHcCCEecCCCee
Confidence 9999999 5666666654332 3556778888888888642 45678889999999999999998889998888999
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC-----------CCCEEEEEeecCCHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS-----------EPGWFRVCFANMSEQTLEVALKRIHN 432 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~-----------~~~~iRls~~~~~~e~i~~~l~~l~~ 432 (442)
+|+|++++.... .+..++++.|++++||.+.||+.|... .++++||+++. +++++++++++|++
T Consensus 317 ~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~~~~l~~ 391 (411)
T 2o0r_A 317 YFLCADPRPLGY----DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK-RDDTLDEAIRRLSV 391 (411)
T ss_dssp SEEEEECGGGTC----CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS-CHHHHHHHHHHHGG
T ss_pred EEEEEecCCCCC----CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 999999875210 125678888876559999999988432 35789999997 89999999999999
Q ss_pred HHHHHH
Q 046900 433 FMQKRE 438 (442)
Q Consensus 433 ~l~~~~ 438 (442)
++++.+
T Consensus 392 ~~~~~~ 397 (411)
T 2o0r_A 392 LAERPA 397 (411)
T ss_dssp GGC---
T ss_pred HHhccC
Confidence 876543
No 34
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2.3e-46 Score=369.80 Aligned_cols=359 Identities=17% Similarity=0.301 Sum_probs=291.3
Q ss_pred CCceeeeeccc-cccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC-CcE
Q 046900 47 PSGVIQMGLAE-NQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRI 123 (442)
Q Consensus 47 ~~~~i~l~~~~-n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i 123 (442)
+..+|||+++. ++++ ++.+.+.+.+.... .....|++..|..++++++++++.+.+| .++++ ++|
T Consensus 38 ~~~~id~~~g~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~l~~~l~~~l~~~~g--~~~~~~~~i 105 (407)
T 3nra_A 38 EGRPVDFSHGDVDAHEPTPGAFDLFSAGVQS----------GGVQAYTEYRGDLGIRDLLAPRLAAFTG--APVDARDGL 105 (407)
T ss_dssp CSCCEETTSCCTTTSCCCTTHHHHHHHHHHH----------THHHHSCCTTCCHHHHHHHHHHHHHHHT--SCCCTTTSE
T ss_pred CCceeeecCcCCCCCCCcHHHHHHHHHHHhc----------CCCCCcCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcE
Confidence 44689999864 4342 34444444433211 0123588888999999999999999877 34555 799
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC----CCCCcCCHHHHHHHHHHHHhcCC
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS----SNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~----~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
++|+|+++++..++.+++++||.|+++.|+|..+...++. .|++++.++++. +.++.+|++.|++.+++
T Consensus 106 ~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------ 178 (407)
T 3nra_A 106 IITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEF-FEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA------ 178 (407)
T ss_dssp EEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHHHHH-TTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT------
T ss_pred EEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHHHHH-cCCEEEEeecccccccCcCCCcCHHHHHHHHhh------
Confidence 9999999999999999999999999999999999999885 999999999842 24678999999999975
Q ss_pred ceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCccc
Q 046900 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKD 279 (442)
Q Consensus 200 ~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~ 279 (442)
+++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++..+.++..+... ..+++++++||||.
T Consensus 179 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~----~~~~~i~~~s~sK~ 254 (407)
T 3nra_A 179 GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAV----DAENVVTIMGPSKT 254 (407)
T ss_dssp TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTS----CGGGEEEEECSSST
T ss_pred CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcc----cCCcEEEEeCcccc
Confidence 78899999999999999999999999999999999999999999999887666665544311 14788999999999
Q ss_pred CCCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 046900 280 LGLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIE 356 (442)
Q Consensus 280 ~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 356 (442)
+|++|+|+||+++ ++.+.+.++..... ...+++.|.++..++.... +++++.+++++++++.+.+.|+++ ++.
T Consensus 255 ~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 330 (407)
T 3nra_A 255 ESLSGYRLGVAFG-SRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAP---GWMEDRIARHQAIRDELLHVLRGCEGVF 330 (407)
T ss_dssp TCCGGGCCEEEEE-CHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCT---THHHHHHHHHHHHHHHHHHHHHTSTTCB
T ss_pred cCCCeeeEEEEEc-CHHHHHHHHHHHhhhccCCChHHHHHHHHHHhccc---hHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 9999999999999 56676666544332 4456788888888887532 245677788899999999999987 888
Q ss_pred eecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 357 CLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 357 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
+..+.+++|+|++++.... +..++++.|++++||.+.||+.|+...++++||+++. +++++++++++|++++++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~~~~ 404 (407)
T 3nra_A 331 ARTPQAGSYLFPRLPKLAV-----APAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAVAAARRIVTLVER 404 (407)
T ss_dssp CCCCSBSSEECCBCCCBSS-----CHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHHHHHHHHHHHHHH
T ss_pred eccCCeeEEEEEeCCCCCC-----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHHH
Confidence 8888999999999876211 3678888887766999999999987677899999998 999999999999999987
Q ss_pred HH
Q 046900 437 RE 438 (442)
Q Consensus 437 ~~ 438 (442)
++
T Consensus 405 ~~ 406 (407)
T 3nra_A 405 YR 406 (407)
T ss_dssp HB
T ss_pred hh
Confidence 54
No 35
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=2.5e-46 Score=367.72 Aligned_cols=353 Identities=16% Similarity=0.231 Sum_probs=285.2
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHH-HHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKS-FRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~-lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
+.++|||+.+.+.++ ++.+.+.+.+.... ....|++. ..+ +|+++|+++++.+| +++++++|+
T Consensus 27 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~--~~~~lr~~la~~l~~~~g--~~~~~~~v~ 91 (390)
T 1d2f_A 27 TADLLPFTISDMDFATAPCIIEALNQRLMH-----------GVFGYSRW--KNDEFLAAIAHWFSTQHY--TAIDSQTVV 91 (390)
T ss_dssp ---CEECCSSSCSSCCCHHHHHHHHHHHTT-----------CCCCCCCS--CCHHHHHHHHHHHHHHSC--CCCCGGGEE
T ss_pred CCCeeEeeecCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCC--ChHHHHHHHHHHHHHhcC--CCCCHHHEE
Confidence 357899999988664 35566655544211 13457664 678 99999999998766 446789999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCC-CCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSN-NFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
+|+|+++++.+++.+++++||.|+++.|+|+.+...++. .|++++.+|++.++ .|.+|++.|++.+++ .++++
T Consensus 92 ~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-----~~~~~ 165 (390)
T 1d2f_A 92 YGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEG-NQRTVMPVALEKQADGWFCDMGKLEAVLAK-----PECKI 165 (390)
T ss_dssp EESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHH-TTCEEEEEECEECSSSEECCHHHHHHHHTS-----TTEEE
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHH-CCCEEEEeecccCCCccccCHHHHHHHhcc-----CCCeE
Confidence 999999999999999999999999999999999998884 89999999987553 678999999998863 26889
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
|++++|+||||.+++.+++++|+++|++||++||+||+|+++.+++..+.++..+..+ ... . +.|+||.+|++
T Consensus 166 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-----~~d-~-~~s~sK~~~~~ 238 (390)
T 1d2f_A 166 MLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARG-----DWA-L-LTSGSKSFNIP 238 (390)
T ss_dssp EEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCS-----SEE-E-EECSHHHHTCG
T ss_pred EEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchh-----hHh-h-ccCccHhhccc
Confidence 9999999999999999999999999999999999999999988876555555444221 102 2 89999999999
Q ss_pred CceeEEEeecCHHHHHHHHHcc----ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCee
Q 046900 284 GFRVGTIYSYNDKVVTTARRMS----SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS-A-GIEC 357 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~ 357 (442)
|+|+||++++++.+.+.+.... .++..+++.|.++.++++.. .+++++.++.++++++.+.+.|++ . |+++
T Consensus 239 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 315 (390)
T 1d2f_A 239 ALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG---APWLDALRIYLKDNLTYIADKMNAAFPELNW 315 (390)
T ss_dssp GGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC
T ss_pred ChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEE
Confidence 9999999996667766665433 23467888888888877642 456788899999999999999988 5 8888
Q ss_pred ecCCceEEEEEecCCc-ccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 358 LKGNAGLFCWMNLSPL-LEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 358 ~~~~~g~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
..+.+++++|++++.. . +..++++.|++++||.+.||+.|+...++++||+++. +++++++++++|++++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 316 QIPQSTYLAWLDLRPLNI------DDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINAIRA 388 (390)
T ss_dssp CCCSBCSEEEEECGGGCC------CHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHH
T ss_pred ecCCccEEEEEEccccCC------CHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 8899999999998752 1 2567888888666999999998864456899999998 789999999999999876
Q ss_pred H
Q 046900 437 R 437 (442)
Q Consensus 437 ~ 437 (442)
.
T Consensus 389 ~ 389 (390)
T 1d2f_A 389 V 389 (390)
T ss_dssp H
T ss_pred h
Confidence 4
No 36
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=1.2e-45 Score=367.58 Aligned_cols=355 Identities=15% Similarity=0.190 Sum_probs=288.0
Q ss_pred Cceeeeecccc-cccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCc---
Q 046900 48 SGVIQMGLAEN-QVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNR--- 122 (442)
Q Consensus 48 ~~~i~l~~~~n-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~--- 122 (442)
+++|||+.+.+ .++. +.+ .+++....... . .....|++..|..++|+++|+++.+.. +++++++
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~-~~~~a~~~~~~------~-~~~~~y~~~~g~~~lr~~ia~~~~~~~---~~~~~~~~~~ 115 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFA-SSLDAMFNDLT------P-DEIFPYAPPQGIEELRDLWQQKMLRDN---PELSIDNMSR 115 (430)
T ss_dssp TCSEECCCSSCEETTEECCC-HHHHTTBSSCC------G-GGTSSCCCTTCCHHHHHHHHHHHHHHC---TTCCGGGBCC
T ss_pred CCcEEeeeeeccCCCCchhh-HHHHHHHHhcC------c-ccccccCCCCCCHHHHHHHHHHHhccC---cccCCCccce
Confidence 46799999988 6542 222 12222221110 0 124679888899999999999998763 3467889
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhh-cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWR-TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
|++|+|+++++.+++.+++++||+|+++.|+|+.+...++ . .|++++.+++++++ |.+|++.|++.+++. +.++
T Consensus 116 i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~---~~~~ 190 (430)
T 2x5f_A 116 PIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFN-TRNGANLQTYPIFDKD-GHYTTDSLVEALQSY---NKDK 190 (430)
T ss_dssp CEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHT-TTTCCEEEEECCBCTT-SCBCSHHHHHHHHHC---CSSE
T ss_pred EEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHH-HhcCCeEEEEeccCcc-CCcCHHHHHHHHHhc---CCCC
Confidence 9999999999999999999999999999999999998887 6 89999999987644 779999999998752 2367
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHh-----cCcEEEEeccCCcCCCCCCCcccHH-HHHhhhcCCCCCc---EEE
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATR-----KNIHLVSDEIYSGSAFSSSEFVSIA-EILEARQYKDSER---VHI 272 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~-----~~~~vi~De~y~~~~~~~~~~~s~~-~~~~~~~~~~~~~---vi~ 272 (442)
+++++++|+||||.+++.+++++|+++|++ +|++||+||+|+++.+++..+.++. .+... .++ +++
T Consensus 191 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~ 265 (430)
T 2x5f_A 191 VIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNL-----HSNAILPIR 265 (430)
T ss_dssp EEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTT-----CCTTEEEEE
T ss_pred EEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhc-----cCCcceEEE
Confidence 899999999999999999999999999999 9999999999999988775556666 56431 367 899
Q ss_pred EecCcccCCCCCceeEEEee--cCHHHHHHHHHcc------ccCCCcHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHH
Q 046900 273 VYSLSKDLGLPGFRVGTIYS--YNDKVVTTARRMS------SFTLISSQTQYLLASMLS-NKKFTENYIKTNRERLQKRY 343 (442)
Q Consensus 273 ~~S~SK~~g~~G~RiG~i~~--~~~~~~~~~~~~~------~~~~~s~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~ 343 (442)
++||||.||++|+|+||+++ +++.+.+.+.... ..+..+++.|.++.++++ +.++ .+++++.++.+++++
T Consensus 266 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~ 344 (430)
T 2x5f_A 266 LDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQF-DKEIEQNIQTLKERY 344 (430)
T ss_dssp EEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHH-HHHHHHHHHHHHHHH
T ss_pred EEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHH-HHHHHHHHHHHHHHH
Confidence 99999999999999999998 3455666554432 235688999999999998 8655 445666899999999
Q ss_pred HHHHHHHH----hCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCC
Q 046900 344 QMIIEGLR----SAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMS 419 (442)
Q Consensus 344 ~~l~~~L~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~ 419 (442)
+.+.+.|+ +.|+++..+++|+|+|++++ .. +..++++.|++++||.+.|| .++++||+++..+
T Consensus 345 ~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~-~~------~~~~~~~~l~~~~gi~v~~g------~~~~iRis~~~~~ 411 (430)
T 2x5f_A 345 EVTKEVVYADQYHSHWQAYDFNSGYFMAIKVH-DV------DPEALRKHLIDKYSIGVIAL------NATDIRIAFSCVE 411 (430)
T ss_dssp HHHHHHHTCGGGTTTEEECCCCBSSEEEEEES-SS------CHHHHHHHHHHHHCEECEEC------SSSEEEEEGGGSC
T ss_pred HHHHHHHHhhCCCCCceeeCCCceEEEEeCCC-CC------CHHHHHHHHHHhCCEEEecC------CCCeEEEEEecCC
Confidence 99999998 66888888999999999997 22 26788899988349999997 3578999999338
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 046900 420 EQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 420 ~e~i~~~l~~l~~~l~~~ 437 (442)
++++++++++|++++++.
T Consensus 412 ~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 412 KDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp GGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999998765
No 37
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.1e-45 Score=362.80 Aligned_cols=352 Identities=18% Similarity=0.279 Sum_probs=291.7
Q ss_pred CCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.+++.++. +.+.+.+.+.... ....|++ +..++++++++++.+.++ ..+++++|++
T Consensus 31 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~--~~~~~~~~l~~~l~~~~g--~~~~~~~v~~ 95 (391)
T 4dq6_A 31 TNDLLPMWVADMDFKAAPCIIDSLKNRLEQ-----------EIYGYTT--RPDSYNESIVNWLYRRHN--WKIKSEWLIY 95 (391)
T ss_dssp CSCSEECCSSSCSSCCCHHHHHHHHHHHTT-----------CCCCCBC--CCHHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCCceeccccCCCCCCCHHHHHHHHHHHhC-----------CCCCCCC--CCHHHHHHHHHHHHHHhC--CCCcHHHeEE
Confidence 3578999999887653 5555555544321 1234654 558999999999999876 4467899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC--CCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD--SSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~--~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
|+|+++++.+++.+++++||+|+++.|+|..+...++. .|++++.+|++ ++++|.+|+++|+++++ ++++
T Consensus 96 ~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~~~ 167 (391)
T 4dq6_A 96 SPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKN-NNRELIISPLQKLENGNYIMDYEDIENKIK-------DVKL 167 (391)
T ss_dssp ESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHH-TTCEEEECCCEECTTSCEECCHHHHHHHCT-------TEEE
T ss_pred cCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHH-cCCeEEeeeeeecCCCceEeeHHHHHHHhh-------cCCE
Confidence 99999999999999999999999999999999999884 99999999988 56678899999999875 2789
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
+++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++..+.++..+..+. .+++++++|+||.+|++
T Consensus 168 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~----~~~~i~~~s~sK~~g~~ 243 (391)
T 4dq6_A 168 FILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEF----EKNTITCMAPTKTFNIA 243 (391)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHH----HHTEEEEECSHHHHTCG
T ss_pred EEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccc----cCcEEEEEechhhccCc
Confidence 99999999999999999999999999999999999999999988776555655543310 26789999999999999
Q ss_pred CceeEEEeecCHHHHHHHHHcc---ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeee
Q 046900 284 GFRVGTIYSYNDKVVTTARRMS---SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA--GIECL 358 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 358 (442)
|+|+||++++++.+.+.+.... ..+..+++.|.++.+.+... ++++++.++.++++++++.+.|++. |+++.
T Consensus 244 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 320 (391)
T 4dq6_A 244 GLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG---ESWLESFLEYLESNIDFAIKYINENMPKLKVR 320 (391)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEC
T ss_pred ccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEec
Confidence 9999999997657776665442 33467888888888877742 4567888999999999999999883 89999
Q ss_pred cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 359 KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 359 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
.+++++++|++++.... +..++++.|++++||.+.||+.|+....+++||+++. +++++++++++|++++
T Consensus 321 ~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 321 KPEGTYLLWVDFSALGL-----SDEELESILVQKGKVALNQGNSFGIGGSGYQRINLAC-PRSMLEEALIRIKNAI 390 (391)
T ss_dssp CCSBSSEEEEECGGGCC-----CHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred CCCccEEEEEEhhhcCC-----CHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 99999999999875211 3678888988877999999999987667899999996 8999999999999876
No 38
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.7e-45 Score=358.50 Aligned_cols=332 Identities=16% Similarity=0.211 Sum_probs=280.6
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|+|+.++|+++ ++.+.+.+.+... ....|++..+ .++|+++|++++ +++++|++|
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~y~~~~~-~~lr~~la~~~~--------~~~~~v~~~ 88 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNAN------------KAHLYPDDSM-IELKSTLAQKYK--------VQNENIIIG 88 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGG------------GTTSCCCTTC-HHHHHHHHHHHT--------CCGGGEEEE
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHH------------hhccCCCCCh-HHHHHHHHHHhC--------CCcceEEEC
Confidence 57899999999885 3556665554431 2456877766 899999999985 578999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++.+++.+++++||+|+++.|+|..+...++. .|++++.+++ .+.++ +|+++|++++++ ++++|++
T Consensus 89 ~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~v~~-~~~~~-~d~~~l~~~l~~------~~~~v~~ 159 (365)
T 3get_A 89 AGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQ-CGAKCYKTQS-ITHNL-DEFKKLYETHKD------EIKLIFL 159 (365)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHH-HTCEEEECSS-SSCCH-HHHHHHHHHTTT------TEEEEEE
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHH-cCCEEEEEec-CCCCC-CCHHHHHHHhCC------CCCEEEE
Confidence 9999999999999999999999999999999998885 8999999998 23467 999999998864 8899999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCC--CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAF--SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~--~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++|+||||.+++.+++.+|+++| ++|+++|+||+|+++.| .+..+.+....... .+++++++|+||.+|++|
T Consensus 160 ~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~s~sK~~~~~G 233 (365)
T 3get_A 160 CLPNNPLGECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKE-----FDNVLYLGTFSKLYGLGG 233 (365)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHH-----CTTEEEEEESSSTTSCTT
T ss_pred cCCCCCCCCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhcc-----CCCEEEEeecchHhcCcc
Confidence 99999999999999999999999 57999999999998875 44344455555433 478999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceE
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGL 364 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~ 364 (442)
+|+||+++ ++.+.+.+......+..+++.|.++.+++++. +++++.++.++++++++.+.|++.|+++.++.++
T Consensus 234 ~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~- 307 (365)
T 3get_A 234 LRIGYGIA-NANIISAFYKLRAPFNVSNLALKAAVAAMDDD----EFTEKTLENNFSQMELYKEFAKKHNIKIIDSYTN- 307 (365)
T ss_dssp TCCEEEEE-CHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCH----HHHHHHHHHHHHHHHHHHHHHHHTTCEECCCSSS-
T ss_pred hheEEEEc-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHhCCCEECCCCCe-
Confidence 99999999 67788887777767778999999999999864 4578888999999999999999999988776665
Q ss_pred EEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 365 FCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
|+|++++.. +..++++.|.++ ||.+.||+.|+ ++++||+++ ++++++++++.|++++
T Consensus 308 ~~~~~~~~~-------~~~~~~~~l~~~-gi~v~~g~~~~---~~~iRis~~--~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 308 FITYFFDEK-------NSTDLSEKLLKK-GIIIRNLKSYG---LNAIRITIG--TSYENEKFFTEFDKIL 364 (365)
T ss_dssp EEEEECSSS-------CHHHHHHHHHTT-TEECEECGGGT---CSEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCC-------CHHHHHHHHHHC-CEEEEECccCC---CCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 689998763 267888888776 99999999886 689999998 5888999999999875
No 39
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1.4e-45 Score=365.79 Aligned_cols=352 Identities=17% Similarity=0.215 Sum_probs=277.9
Q ss_pred Cceeeeecccc-----cc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 48 SGVIQMGLAEN-----QV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 48 ~~~i~l~~~~n-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
.++|+|+.+++ ++ +++.+.+.+.+... .....|++..|.++||+++++++.+..+. . .++
T Consensus 38 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~--~-~~~ 103 (418)
T 3rq1_A 38 ENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSD-----------SEHVGYAPIAGIPDFLCAAEKECFGNFRP--E-GHI 103 (418)
T ss_dssp GGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCH-----------HHHHSCCCTTCCHHHHHHHHHHHHGGGCC--S-SEE
T ss_pred CCeEECCCCcccCCCCCccccHHHHHHHHHhcc-----------cccCCCCCCCChHHHHHHHHHHHhcccCc--c-ccc
Confidence 47899999863 33 34666766665431 12357988889999999999999765431 1 133
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
+|++|+|+++++..++.+++++||.|+++.|+|+.+...++. .|++++.+|+++++ |.+|++.|++.+++.... ++
T Consensus 104 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~v~~~~~~-~~~d~~~l~~~l~~~~~~--~~ 179 (418)
T 3rq1_A 104 RSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSD-TGRTLVTYSLFDEH-NNFNHEAFQNRVNELAAK--QT 179 (418)
T ss_dssp EEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHH-TTCEEEEECSBCTT-SSBCHHHHHHHHHHHHHH--CS
T ss_pred cEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHH-cCCEEEEEeeeCCC-CCcCHHHHHHHHHHhhcc--CC
Confidence 999999999999999999999999999999999999999885 99999999986544 789999999999753211 34
Q ss_pred e-EEEEeCC-CCCCCcCCCHHHHHHHHHHHH------hcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCc--EE
Q 046900 202 R-GVLITNP-SNPLGATIQRSVLEELLDFAT------RKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSER--VH 271 (442)
Q Consensus 202 ~-~v~l~~P-~NPtG~~~~~~~l~~l~~~~~------~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~--vi 271 (442)
+ ++++++| |||||.+++.+++++|+++|+ +|+++||+||+|.++.+++....++.....+ ..++ ++
T Consensus 180 ~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~----~~~~~~~i 255 (418)
T 3rq1_A 180 NVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSH----LPKEILTC 255 (418)
T ss_dssp EEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTT----CCTTEEEE
T ss_pred CEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHh----cCCCceEE
Confidence 4 7889999 999999999999999999999 8999999999999987654322222222111 1234 58
Q ss_pred EEecCcccCCCCCceeEEEee--cCHHHHHHHHHccc------cCCCcHHHHHHHHHHhcCchhH---HHHHHHHHHHHH
Q 046900 272 IVYSLSKDLGLPGFRVGTIYS--YNDKVVTTARRMSS------FTLISSQTQYLLASMLSNKKFT---ENYIKTNRERLQ 340 (442)
Q Consensus 272 ~~~S~SK~~g~~G~RiG~i~~--~~~~~~~~~~~~~~------~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~ 340 (442)
+++||||.+|++|+|+||+++ +++.+.+.+..... +..++.++|.++..++++.++. .++++++++.++
T Consensus 256 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 335 (418)
T 3rq1_A 256 VCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIR 335 (418)
T ss_dssp EEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999988 35666666554321 2357889999999999987532 334556788999
Q ss_pred HHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCH
Q 046900 341 KRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSE 420 (442)
Q Consensus 341 ~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~ 420 (442)
++++++.+.|++.|+++..+++|+|+|++++. ..++++.|.+ +||.+.|| ++++||+++.+++
T Consensus 336 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~-~gi~v~~g-------~~~iRis~~~~~~ 398 (418)
T 3rq1_A 336 DRADIFKQEAAQVGLPMLPYRGGFFITIPTDS---------ANAICEELKK-EHIYVIAL-------ANGIRIAACGIPK 398 (418)
T ss_dssp HHHHHHHHHHHHHTCCCCCCCSSSEEEEECTT---------HHHHHHHHHH-TTEECEEC-------SSEEEEEGGGSCH
T ss_pred HHHHHHHHHHHhcCCCCCCCCceEEEEcCCCC---------HHHHHHHHHh-CCEEEecC-------CCCeEEEEecCCH
Confidence 99999999999889999999999999998753 5677776654 59999997 3679999985589
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 046900 421 QTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 421 e~i~~~l~~l~~~l~~~~ 438 (442)
+++++++++|+++++++.
T Consensus 399 ~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 399 CQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp HHHTTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998754
No 40
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.6e-46 Score=373.11 Aligned_cols=357 Identities=13% Similarity=0.154 Sum_probs=289.6
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|+|+.++++++ ++.+.+.+.+.... .....|++..|..++|+++|+++++.++ +++++++|++
T Consensus 43 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~lr~~la~~~~~~~g--~~~~~~~i~~ 110 (437)
T 3g0t_A 43 GTKFCRMEMGVPGLPAPQIGIETEIQKLRE----------GVASIYPNLDGLPELKQEASRFAKLFVN--IDIPARACVP 110 (437)
T ss_dssp TCCCEECCCCSCCSCCCHHHHHHHHHHHHH----------TGGGSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCCEEeccCcCCCCCCCHHHHHHHHHHHhC----------CcCcCCCCCCChHHHHHHHHHHHHHhhC--CCCCcccEEE
Confidence 357899999998875 35555554443211 0125788888999999999999998877 4578899999
Q ss_pred ecChHHHHHHHHHhhc--CCCC--eEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 126 TAGATAANELLTFILA--DPGD--ALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~--~~gd--~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
|+|+++++.+++.+++ ++|| +|+++.|+|..+...++. .|++++.++++ +++|.+|++.|++++++ .++
T Consensus 111 t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~-~g~~~~~v~~~-~~~~~~d~~~l~~~l~~-----~~~ 183 (437)
T 3g0t_A 111 TVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRI-LGQKFESFDLF-EYRGEKLREKLESYLQT-----GQF 183 (437)
T ss_dssp ESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHH-HTCCCEEEEGG-GGCTTHHHHHHHHHHTT-----TCC
T ss_pred eCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHH-cCCEEEEEeec-CCCCccCHHHHHHHHhc-----CCc
Confidence 9999999999999998 9999 999999999999999885 89999999997 45688999999999832 278
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc----cH-HHHHhhhcCCCCCcEEEEecC
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV----SI-AEILEARQYKDSERVHIVYSL 276 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~----s~-~~~~~~~~~~~~~~vi~~~S~ 276 (442)
++|++++|+||||.+++.+++++|+++|++||++||+||+|+++.+++.... ++ ..+.. ..+++++++|+
T Consensus 184 ~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~ 258 (437)
T 3g0t_A 184 CSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVAN-----YTDNYILALSS 258 (437)
T ss_dssp CEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGG-----TCSCEEEEEES
T ss_pred eEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCC-----CCCcEEEEEcC
Confidence 9999999999999999999999999999999999999999999887632111 00 22222 14789999999
Q ss_pred cccCCCCCceeEEEeecCHHHHH-H-----------------HHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHH
Q 046900 277 SKDLGLPGFRVGTIYSYNDKVVT-T-----------------ARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNR 336 (442)
Q Consensus 277 SK~~g~~G~RiG~i~~~~~~~~~-~-----------------~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 336 (442)
||.+|++|+|+||++++ +.+.+ . +..... .+..+++.|.++..+++......+++++.+
T Consensus 259 sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 337 (437)
T 3g0t_A 259 SKAFSYAGQRIGVLMIS-GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSV 337 (437)
T ss_dssp TTTTSCGGGCCEEEEEC-HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHH
T ss_pred ccCCCCccceeEEEEEC-HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHH
Confidence 99999999999999995 55555 4 443322 367889999999998876432122267888
Q ss_pred HHHHHHHHHHHHHHHhCCCeee-------cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCC
Q 046900 337 ERLQKRYQMIIEGLRSAGIECL-------KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPG 409 (442)
Q Consensus 337 ~~~~~~~~~l~~~L~~~g~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~ 409 (442)
+.++++++.+.+.|++.|+++. ++.+++|+|++++. . +..++++.|+++ ||.+.||..|+...++
T Consensus 338 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~l~~~L~~~-gi~v~~~~~~~~~~~~ 409 (437)
T 3g0t_A 338 IEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYKG-M------DSSKLIEKFVRY-GMCAITLKTTGSKRNE 409 (437)
T ss_dssp HHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEETT-C------CHHHHHHHHHHT-TEECEESTTTTCCCTT
T ss_pred HHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecCC-C------CHHHHHHHHHHc-CeEEeeccccCCCCCC
Confidence 9999999999999999898887 43889999999982 1 367888998877 9999999998765557
Q ss_pred EEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 410 WFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 410 ~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
++||+++..+++++++++++|++++++
T Consensus 410 ~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 410 AMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp CEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 899999966899999999999998753
No 41
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=5.4e-45 Score=359.05 Aligned_cols=353 Identities=18% Similarity=0.293 Sum_probs=286.3
Q ss_pred Cceeeeeccccc---ccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 48 SGVIQMGLAENQ---VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 48 ~~~i~l~~~~n~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
+++|||+.+.+. ++++.+.+.+.+...... .....|++..|..++|++++++++ +++++|+
T Consensus 32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~--------~~~~~y~~~~~~~~l~~~la~~~g--------~~~~~v~ 95 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILREKG--------EVALQYSPTEGYAPLRAFVAEWIG--------VRPEEVL 95 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHH--------HHHTSCCCTTCCHHHHHHHHHHHT--------SCGGGEE
T ss_pred CCceecCCCCCCchhCCHHHHHHHHHHHHHhcc--------hhhhCCCCCCCCHHHHHHHHHHhC--------CChhhEE
Confidence 367899876532 255666655544321100 013468877899999999999984 5688999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++.+++.+++++||+|+++.|+|+.+...++. .|++++.+|++++ .+|+++|++.+++ .++++|
T Consensus 96 ~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~---~~d~~~l~~~l~~-----~~~~~v 166 (397)
T 2zyj_A 96 ITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRL-QGPRFLTVPAGEE---GPDLDALEEVLKR-----ERPRFL 166 (397)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHT-TCCEEEEEEEETT---EECHHHHHHHHHH-----CCCSCE
T ss_pred EeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHH-cCCEEEecCcCCC---CCCHHHHHHHHhh-----cCCeEE
Confidence 999999999999999999999999999999999998884 8999999998754 2899999999875 156777
Q ss_pred -EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 205 -LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 205 -~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
++++|+||||.+++.+++++|+++|++||++||+||+|+++.+++..+.++..+..+. ..+++++++|+||.+| +
T Consensus 167 ~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~---~~~~~i~~~s~sK~~~-~ 242 (397)
T 2zyj_A 167 YLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREA---GYPGVIYLGSFSKVLS-P 242 (397)
T ss_dssp EECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHH---TCCCEEEEEESTTTTC-G
T ss_pred EECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCccc---CCCeEEEEeccccccc-c
Confidence 4689999999999999999999999999999999999999988776566777765420 0167899999999999 9
Q ss_pred CceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC---CCeee
Q 046900 284 GFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA---GIECL 358 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~ 358 (442)
|+|+||++++ +.+.+.+..... .+..+++.|.++.++++...+ +++++.++.++++++.+.+.|++. |+++.
T Consensus 243 G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~ 319 (397)
T 2zyj_A 243 GLRVAFAVAH-PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFS--ERLERVRRVYREKAQAMLHALDREVPKEVRYT 319 (397)
T ss_dssp GGCCEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTSEEC
T ss_pred cceeEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEc
Confidence 9999999994 666666654332 245688999999999987643 668888999999999999999875 78887
Q ss_pred cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC--CCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 359 KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS--EPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 359 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~--~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
.+.+|+|+|++++... +..++++.|+++ ||.+.||..|+.. .++++||+++..+++++++++++|++++++
T Consensus 320 ~~~~g~~~~~~~~~~~------~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 320 RPKGGMFVWMELPKGL------SAEGLFRRALEE-NVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKG 392 (397)
T ss_dssp CCSBSSEEEEECSTTC------CHHHHHHHHHHT-TEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred cCCccEEEEEEcCCCC------CHHHHHHHHHHC-CCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 8888999999997532 256888898888 9999999988643 458999999875799999999999999987
Q ss_pred HHh
Q 046900 437 RER 439 (442)
Q Consensus 437 ~~~ 439 (442)
..+
T Consensus 393 ~~~ 395 (397)
T 2zyj_A 393 LLA 395 (397)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 42
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=6.2e-46 Score=378.38 Aligned_cols=356 Identities=16% Similarity=0.210 Sum_probs=271.9
Q ss_pred eeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHH-HHHhCCCC-ccCCCcEEEec
Q 046900 50 VIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFM-EQIRGGRA-KFDLNRIVVTA 127 (442)
Q Consensus 50 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l-~~~~~~~~-~~~~~~i~~t~ 127 (442)
+|+|+++++.++++.+...+.+.. ....|+++.|..++|+++++++ .++.+.+. ..++++|++|+
T Consensus 106 ~i~l~~g~~~~~~~~~~~al~~~~-------------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~ 172 (546)
T 2zy4_A 106 SLSYVRDQLGLDPAAFLHEMVDGI-------------LGCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVE 172 (546)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHH-------------HTCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEE
T ss_pred hhecccCCCCCCChHHHHHHHHhh-------------hcCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEEC
Confidence 789999988887655444443321 1247999989999999987765 44433222 12578999999
Q ss_pred ChHHHHHHHHHh-----hcCCCCeEEEcCCCCcChHHhHhh-hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 128 GATAANELLTFI-----LADPGDALLVPTPYYPGFDRDLRW-RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 128 G~~~ai~~~~~~-----l~~~gd~Vl~~~p~y~~~~~~~~~-~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
|+++++..++.+ ++++||.|++++|+|+.|...+.. ..|++++.++++++++|.+|++.|++.+. .++
T Consensus 173 G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~------~~~ 246 (546)
T 2zy4_A 173 GGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD------PAI 246 (546)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS------TTE
T ss_pred CHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC------CCC
Confidence 999999999987 578999999999999999887542 24799999999888889999999988753 278
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHH--HhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCccc
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFA--TRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKD 279 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~--~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~ 279 (442)
++|++||||||||.+++.+++++|+++| ++++++||+||+|+++.++ +.++.... .+++++++||||.
T Consensus 247 k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-------~~~~i~~~S~SK~ 316 (546)
T 2zy4_A 247 KIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-------PENTLLVYSFSKY 316 (546)
T ss_dssp EEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-------GGGEEEEEESTTT
T ss_pred eEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-------CCCEEEEEeCccc
Confidence 9999999999999999999999999999 7899999999999998753 44565542 2689999999999
Q ss_pred CCCCCceeEEEeecCHHHHHHHHH-------------c-------------------------cccCCCcHHHHHHH---
Q 046900 280 LGLPGFRVGTIYSYNDKVVTTARR-------------M-------------------------SSFTLISSQTQYLL--- 318 (442)
Q Consensus 280 ~g~~G~RiG~i~~~~~~~~~~~~~-------------~-------------------------~~~~~~s~~~q~~~--- 318 (442)
+|++|+|+||++++++.+.+.+.. . .....++.+.|.++
T Consensus 317 ~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~ 396 (546)
T 2zy4_A 317 FGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALF 396 (546)
T ss_dssp TTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHH
T ss_pred cCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHH
Confidence 999999999999976534444311 1 11135677888764
Q ss_pred --HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCccc---ccCh-------hhHHHHH
Q 046900 319 --ASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLE---EQTR-------EGELALW 386 (442)
Q Consensus 319 --~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~---~~~~-------~~~~~l~ 386 (442)
++++++. +.|++++++.|+++++.+.+.|. .++.+.++++|||+|++++.+.. ...+ .+..+++
T Consensus 397 a~~all~~~---~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l 472 (546)
T 2zy4_A 397 SLFALMDEA---DEYKHTLKQLIRRRETTLYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDML 472 (546)
T ss_dssp HHHHHHCTT---CHHHHHHHHHHHHHHHHHHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHH
Confidence 3455543 34678889999999999999996 56666778999999999864210 0000 0123334
Q ss_pred HHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 387 DSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 387 ~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.++++++||.+.||+.|+. .++++||+++..+++++++++++|+++++++.+
T Consensus 473 ~~ll~~~gV~v~pG~~F~~-~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~ 524 (546)
T 2zy4_A 473 FRIADETGIVLLPGRGFGS-NRPSGRASLANLNEYEYAAIGRALRKMADELYA 524 (546)
T ss_dssp HHHHHHHSCCCEESSCTTC-SSCEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEeCccccCC-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4455555999999999975 468999999976899999999999999887653
No 43
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=1.8e-45 Score=359.05 Aligned_cols=339 Identities=22% Similarity=0.411 Sum_probs=277.4
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.+++.++ ++.+.+.+.+.... ....|++..|..++|+++|+|+++.+| +.+++++|++
T Consensus 28 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~~~~~~l~~~la~~~~~~~g--~~~~~~~v~~ 94 (370)
T 2z61_A 28 GKKVIHLEIGEPDFNTPKPIVDEGIKSLKE-----------GKTHYTDSRGILELREKISELYKDKYK--ADIIPDNIII 94 (370)
T ss_dssp TCCCEECCCCSCSSCCCHHHHHHHHHHHHT-----------TCCSCCCTTCCHHHHHHHHHHHHHHSS--CCCCGGGEEE
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHHc-----------CccCCCCCCCCHHHHHHHHHHHHHHhC--CCCChhhEEE
Confidence 456899999988763 34455544433211 134688878999999999999998776 4577899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++.+++++||.|++++|+|+.+...++. .|++++.++ +|+++|++.+++ ++++|+
T Consensus 95 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~v~--------~d~~~l~~~l~~------~~~~v~ 159 (370)
T 2z61_A 95 TGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRF-LGAKPVFCD--------FTVESLEEALSD------KTKAII 159 (370)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHH-TTCEEEEEC--------SSHHHHHHHCCS------SEEEEE
T ss_pred CCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHH-cCCEEEEeC--------CCHHHHHHhccc------CceEEE
Confidence 99999999999999999999999999999999998885 899999887 588999988754 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.+ |+++|++||++||+||+|+++.+++. +.++..+.. ..+++++++|+||.+|++|+
T Consensus 160 ~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G~ 229 (370)
T 2z61_A 160 INSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDE-----NLEKTILINGFSKLYAMTGW 229 (370)
T ss_dssp EESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCT-----TCSSEEEEEESTTTTTCGGG
T ss_pred EcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccC-----CCCcEEEEecChhccCCccc
Confidence 999999999999976 88999999999999999999888653 334443321 24789999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+||+++ ++.+.+.++.... .+..+++.|.++.++++.. ..+++++.++.++++++++.+.|++.|+++..+++|
T Consensus 230 r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 306 (370)
T 2z61_A 230 RIGYVIS-NDEIIEAILKLQQNLFISAPTISQYAALKAFEKE--TEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGA 306 (370)
T ss_dssp CCEEEEC-CHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHH--HHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCBT
T ss_pred eEEEEEE-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCcc
Confidence 9999999 4566666654433 2467889999888888741 145678889999999999999999888888888899
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|+|++++. +..++++.|++++||.+.||+.|+...++++||+++. +++++++++++|+++++
T Consensus 307 ~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~-~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 307 YYVFPNIGE--------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYAN-SYENIKEGLERIKEFLN 369 (370)
T ss_dssp TEECCBCSS--------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCS-CHHHHHHHHHHHHHHHC
T ss_pred eEEEEecCC--------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 999999875 1567888888445999999998864346799999996 99999999999998874
No 44
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=2.5e-44 Score=348.63 Aligned_cols=337 Identities=17% Similarity=0.234 Sum_probs=281.0
Q ss_pred CCCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 46 NPSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
.+.++|||++++|+++ ++.+.+.+.+... ....|++ .+..++|+++|++++ +++++|+
T Consensus 14 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~y~~-~~~~~l~~~la~~~~--------~~~~~i~ 72 (354)
T 3ly1_A 14 STDNPIRINFNENPLGMSPKAQAAARDAVV------------KANRYAK-NEILMLGNKLAAHHQ--------VEAPSIL 72 (354)
T ss_dssp CSSSCEECSSCCCSSCCCHHHHHHHHHTGG------------GTTSCCH-HHHHHHHHHHHHHTT--------SCGGGEE
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHHHh------------hCcCCCC-CchHHHHHHHHHHhC--------CChHHEE
Confidence 4567899999999884 4666666665532 2356754 578999999999974 6789999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++.+++.+++++||+|+++.|+|..+...++. .|++++.+++++ ++.+|++.|++.+++ ..++++|
T Consensus 73 ~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~~~~~~--~~~~d~~~l~~~l~~----~~~~~~v 145 (354)
T 3ly1_A 73 LTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKI-AGMKVTKVKMLD--NWAFDIEGLKAAVAA----YSGPSIV 145 (354)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHH-TTCEEEEECCCT--TSCCCHHHHHHHHHT----CSSCEEE
T ss_pred EeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHHHHHH-cCCEEEEecCCC--CCCCCHHHHHHHhcc----CCCCCEE
Confidence 999999999999999999999999999999999998885 999999999875 478999999999973 1278999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.+++.+++.+|+++| ++|+++|+||+|+++.+++... +....... ..+++++++|+||.+|++|
T Consensus 146 ~l~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~-~~~~~~~~----~~~~~i~~~s~sK~~g~~G 219 (354)
T 3ly1_A 146 YLVNPNNPTGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFR-SISPMITQ----GAENIILLKTFSKIHAMAG 219 (354)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCC-CSHHHHHT----TCSSEEEEEESSSTTCCGG
T ss_pred EEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccC-CHHHHhhh----cCCCEEEEeeChhhccChh
Confidence 9999999999999999999999999 8999999999999988766433 33333332 1278999999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceE
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGL 364 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~ 364 (442)
+|+||+++ ++.+.+.++.....+..+++.|.++.++++.. +++++.++.++++++++.+.|++.|+.+.++. |+
T Consensus 220 ~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~ 293 (354)
T 3ly1_A 220 MRVGYAVA-HPTVIALMGRYVAGEKINFSGVDAALASMNDS----AFITYSKKSNDVSRQILLKALEDLKLPYLPSE-GN 293 (354)
T ss_dssp GCCEEEEC-CHHHHHHHGGGTTCSCCCHHHHHHHHHHTTCH----HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCC-SS
T ss_pred hhheeeec-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHHCCCeECCCC-ce
Confidence 99999999 67788888777777888999999999999865 45778889999999999999998888877655 45
Q ss_pred EEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 365 FCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
|+|++++. +..++.+.|.++ ||.+. |+.++ .++++||+++ +++++++++++|++++++
T Consensus 294 ~~~~~~~~--------~~~~~~~~l~~~-gi~v~-g~~~~--~~~~iRis~~--~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 294 FVFHQLVV--------PLKDYQTHMADA-GVLIG-RAFPP--ADNWCRISLG--TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp EEEEECSS--------CHHHHHHHHHHT-TEECC-CCCTT--CTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCC--------CHHHHHHHHHHC-CEEEe-ecCCC--CCCEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 79999875 256788888765 99999 76543 5689999997 588899999999998864
No 45
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=6.8e-45 Score=359.42 Aligned_cols=360 Identities=21% Similarity=0.354 Sum_probs=288.4
Q ss_pred ceeeeeccccc---ccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 49 GVIQMGLAENQ---VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 49 ~~i~l~~~~n~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
++|||+.+.+. ++.+.+.+.+.+...... .... |++..|..++|+++|+++.+.+| .++++++|++
T Consensus 35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~--------~~~~-y~~~~~~~~l~~~la~~~~~~~g--~~~~~~~v~~ 103 (407)
T 2zc0_A 35 KLISLAAGDPDPELIPRAVLGEIAKEVLEKEP--------KSVM-YTPANGIPELREELAAFLKKYDH--LEVSPENIVI 103 (407)
T ss_dssp CCEECCSCCCCTTTSCHHHHHHHHHHHHHHCG--------GGGS-CCCTTCCHHHHHHHHHHHHHHSC--CCCCGGGEEE
T ss_pred ceEeCCCCCCCchhCCHHHHHHHHHHHHhhcc--------cccc-CCCCCCCHHHHHHHHHHHHHhcC--CCCCcceEEE
Confidence 67899877643 255666555543321100 1234 88888999999999999987665 4467899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE-
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV- 204 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v- 204 (442)
|+|+++++.+++.+++++||.|+++.|+|..+...+.. .|++++.+|++++ .+|++.|++.+++....+.++++|
T Consensus 104 t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~v~ 179 (407)
T 2zc0_A 104 TIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQ-LGAKIEGVPVDND---GMRVDLLEEKIKELKAKGQKVKLIY 179 (407)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHT-TTCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHH-cCCEEEEcccCCC---CCCHHHHHHHHHhhhcccCCceEEE
Confidence 99999999999999999999999999999999998884 8999999998754 289999999987322122367887
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.+++.+++++|+++|++||++||+||+|+.+.+++..+.++..+.. .+++++++||||.+| +|
T Consensus 180 ~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~------~~~~i~~~s~sK~~~-~G 252 (407)
T 2zc0_A 180 TIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDN------EGRVIVAGTLSKVLG-TG 252 (407)
T ss_dssp ECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCS------SCCEEEEEESTTTTC-TT
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCC------CCCEEEEcccccccC-CC
Confidence 46799999999999999999999999999999999999998887655555544422 368899999999999 99
Q ss_pred ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHH-HHHHHHHHHHHHHHHHHHHHHHhC--CCeeec
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTE-NYIKTNRERLQKRYQMIIEGLRSA--GIECLK 359 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~ 359 (442)
+|+||+++ ++.+.+.+...... +..+++.|.++.++++...+ + +++++.++.++++++++.+.|++. ++++..
T Consensus 253 ~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 330 (407)
T 2zc0_A 253 FRIGWIIA-EGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYF-EKYHLEGALLGYKEKRDIMLKALENHLPNAEFTK 330 (407)
T ss_dssp SCCEEEEC-CHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHH-HHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCC
T ss_pred cceEEEec-CHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEec
Confidence 99999999 46677666654333 44688999999999987633 4 567788899999999999999874 677777
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC--CCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS--EPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~--~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+.+|+|+|++++... +..++++.|++++||.+.||..|+.. .++++||+++..+++++++++++|++++++.
T Consensus 331 ~~~~~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 331 PIAGMFVMFFLPEGA------DGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp CSBSSEEEEECSTTC------CHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEcCCCC------CHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 888999999997532 25688888888779999999988643 3579999998657899999999999998765
Q ss_pred H
Q 046900 438 E 438 (442)
Q Consensus 438 ~ 438 (442)
.
T Consensus 405 ~ 405 (407)
T 2zc0_A 405 F 405 (407)
T ss_dssp C
T ss_pred h
Confidence 3
No 46
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=5.1e-45 Score=360.68 Aligned_cols=353 Identities=21% Similarity=0.366 Sum_probs=288.4
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.+++.++ ++.+.+.+ +.... ....|++..|..++|+++++|+++.++ +++++++|++
T Consensus 42 g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~-----------~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~v~~ 107 (409)
T 2gb3_A 42 GVRIHHLNIGQPDLKTPEVFFERI-YENKP-----------EVVYYSHSAGIWELREAFASYYKRRQR--VDVKPENVLV 107 (409)
T ss_dssp TCEEEECSSCCCCSCCCTHHHHHH-HHTCC-----------SSCCCCCTTCCHHHHHHHHHHHHHTSC--CCCCGGGEEE
T ss_pred CCCEEeccCCCCCCCCCHHHHHHH-HHHhc-----------CCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 457899999988653 34455555 33211 124688888899999999999998765 4567899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++.+++++||.|+++.|+|+.+...++. .|++++.+|++++++|.+ ++.|++.+++ ++++|+
T Consensus 108 ~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~-~~~l~~~l~~------~~~~v~ 179 (409)
T 2gb3_A 108 TNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKI-AGVKLIPVTRRMEEGFAI-PQNLESFINE------RTKGIV 179 (409)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHH-HTCEEEEEECCGGGTSCC-CTTGGGGCCT------TEEEEE
T ss_pred eCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHH-cCCEEEEeccCCCCCCcc-HHHHHHhhCc------CCeEEE
Confidence 99999999999999999999999999999999998885 899999999875456666 7888887754 789999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.+++++|+++|+++|++||+||+|+.+.+++. +.++ + .+ ..+++++++|+||.+|++|+
T Consensus 180 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~--~-~~----~~~~~i~~~s~sK~~g~~G~ 251 (409)
T 2gb3_A 180 LSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASA--L-SI----ESDKVVVIDSVSKKFSACGA 251 (409)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCG--G-GS----CCTTEEEEEESTTTTTCGGG
T ss_pred ECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCc--c-cc----CCCCEEEEecchhccCCccc
Confidence 999999999999999999999999999999999999999887663 3333 1 11 13678999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccccC-CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCee-ecCCce
Q 046900 286 RVGTIYSYNDKVVTTARRMSSFT-LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIEC-LKGNAG 363 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~g 363 (442)
|+||++++++.+.+.++.....+ ..+++.|.++.++++.. .+++++.++.++++++++.+.|++.|+++ ..+.+|
T Consensus 252 r~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 328 (409)
T 2gb3_A 252 RVGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLD---DSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGA 328 (409)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBS
T ss_pred eEEEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCCCee
Confidence 99999997636666665544333 67889999999998753 45678888999999999999999888888 778899
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHc-----CcEEEeCCCCCCC---CCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHE-----VKLNISPGSSCHC---SEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~gi~v~pg~~f~~---~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+|+|++++. . +..++++.|+++ +||.+.||..|+. ..++++||+++. +++++++++++|+++++
T Consensus 329 ~~~~~~~~~-~------~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~-~~e~i~~~~~~l~~~l~ 400 (409)
T 2gb3_A 329 FYITAELPV-E------DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVL-EKDLLSRAIDVLMEGLK 400 (409)
T ss_dssp SEEEEECSS-S------CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCC-C------CHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHH
Confidence 999999872 1 266788888776 5999999988864 236799999995 99999999999999998
Q ss_pred HHHhh
Q 046900 436 KRERR 440 (442)
Q Consensus 436 ~~~~~ 440 (442)
+.+..
T Consensus 401 ~~~~~ 405 (409)
T 2gb3_A 401 MFCSS 405 (409)
T ss_dssp HHHC-
T ss_pred Hhhhc
Confidence 87654
No 47
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=6.6e-45 Score=361.96 Aligned_cols=325 Identities=16% Similarity=0.183 Sum_probs=267.2
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHH--HHHHHhhcC--C----------CCeEEEcCC
Q 046900 87 ENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAAN--ELLTFILAD--P----------GDALLVPTP 152 (442)
Q Consensus 87 ~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai--~~~~~~l~~--~----------gd~Vl~~~p 152 (442)
...+|++..|.++||++||+|++ +++++|++|+|+++++ .+++.++++ + ||+|++++|
T Consensus 70 ~~~~Y~~~~g~~~lr~~ia~~~~--------~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p 141 (427)
T 3ppl_A 70 DVRNYGGLDGIVDIRQIWADLLG--------VPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVP 141 (427)
T ss_dssp BTTSSCCSSCCHHHHHHHHHHHT--------SCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEES
T ss_pred hhcCCCCCCCcHHHHHHHHHHhC--------CCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCC
Confidence 35689998999999999999984 6789999999999999 588888877 6 899999999
Q ss_pred CCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCCcCCCHHHHHHHHHHH-H
Q 046900 153 YYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT-NPSNPLGATIQRSVLEELLDFA-T 230 (442)
Q Consensus 153 ~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~-~P~NPtG~~~~~~~l~~l~~~~-~ 230 (442)
+|..+...++. .|++++.+|+++++ +|++.|+++++. .++++|+++ +||||||.+++.+++++|+++| +
T Consensus 142 ~y~~~~~~~~~-~g~~~~~v~~~~~g---~d~~~l~~~l~~-----~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~ 212 (427)
T 3ppl_A 142 GYDRHFSITER-FGFEMISVPMNEDG---PDMDAVEELVKN-----PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETA 212 (427)
T ss_dssp CCHHHHHHHHH-TTCEEEEEEEETTE---ECHHHHHHHTTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCS
T ss_pred CcHHHHHHHHH-cCCEEEEeCCCCCC---CCHHHHHHHHhc-----CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhh
Confidence 99999999985 99999999998643 899999998842 378887765 7799999999999999999999 9
Q ss_pred hcCcEEEEeccCCcCCCCCCC--cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc--
Q 046900 231 RKNIHLVSDEIYSGSAFSSSE--FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS-- 306 (442)
Q Consensus 231 ~~~~~vi~De~y~~~~~~~~~--~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~-- 306 (442)
+||++||+||+|+++.|++.. +.++.++... .+..+++++++||||. +++|+|+||+++ ++.+.+.+.....
T Consensus 213 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~-~~~G~r~G~~~~-~~~l~~~~~~~~~~~ 288 (427)
T 3ppl_A 213 APDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEA--AGNPNRFWAFTSTSKI-TLAGAGVSFFLT-SAENRKWYTGHAGIR 288 (427)
T ss_dssp STTCEEEEECTTTTCBSSSCCCCCCCHHHHHHH--TTCTTSEEEEEESTTT-SCTTSSCEEEEC-CHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccccCCCCCCccchhhhhhc--cCCCCcEEEEechhhc-cCcCccEEEEEc-CHHHHHHHHHHhhcc
Confidence 999999999999998886543 4466665321 0125789999999999 579999999999 5666666654432
Q ss_pred cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeeecCCceEEEEEecCCcccccChhh
Q 046900 307 FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-----GIECLKGNAGLFCWMNLSPLLEEQTREG 381 (442)
Q Consensus 307 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~g~~~~~~~~~~~~~~~~~~ 381 (442)
.+..+++.|.++..++.+.+...+++++.++.++++++.+.+.|.+. ++.+..|.+|+|+|++++.. +
T Consensus 289 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-------~ 361 (427)
T 3ppl_A 289 GIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG-------T 361 (427)
T ss_dssp CSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT-------C
T ss_pred cCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc-------h
Confidence 35678999999999999844447788899999999999999888652 57777889999999999863 2
Q ss_pred HHHHHHHHHHcCcEEEeC-CCCCCC---CCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 382 ELALWDSMLHEVKLNISP-GSSCHC---SEPGWFRVCFANMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 382 ~~~l~~~l~~~~gi~v~p-g~~f~~---~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
..++.+.|.++ ||.+.| |..|.. ..++++||+++..+++++++++++|.+++++....
T Consensus 362 ~~~~~~~l~~~-gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~~~~~~ 423 (427)
T 3ppl_A 362 ASRVAELAKEA-GIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCVLLAAAE 423 (427)
T ss_dssp HHHHHHHHHHT-TEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 56677766555 999999 555542 24689999998768899999999999999876543
No 48
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=5.5e-46 Score=370.29 Aligned_cols=350 Identities=19% Similarity=0.276 Sum_probs=276.4
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+++++.++ ++.+.+.+.+...... .......|++..|..+||+++++|+.+. +.+++++|++
T Consensus 55 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~------~~~~~~~y~~~~g~~~l~~~ia~~~~~~----~~~~~~~i~~ 124 (432)
T 3ei9_A 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELS------TIEGYSGYGAEQGAKPLRAAIAKTFYGG----LGIGDDDVFV 124 (432)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHHHHHTT------STTTCCCCCCTTCCHHHHHHHHHHHHTT----TTCCGGGEEE
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhccc------ccCCccCCCCCCCCHHHHHHHHHHHHcc----CCCCcceEEE
Confidence 357899999987764 3444444433221100 0012347888789999999999999742 4467899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcC------------cEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG------------IKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G------------~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
|+|+++++..+ ..++++||.|++++|+|+++...++. .| .+++.++++.++++..|++.
T Consensus 125 t~G~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------- 195 (432)
T 3ei9_A 125 SDGAKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVI-MGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST------- 195 (432)
T ss_dssp ESCHHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHH-HTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-------
T ss_pred CCChHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHH-cCCcccccccccccCceEEeccCcccCCcCChhh-------
Confidence 99999999985 67789999999999999999988874 66 36788888766666666443
Q ss_pred HHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEE
Q 046900 194 AESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIV 273 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~ 273 (442)
..+++++++++|+||||.+++.+++++|+++|++||++||+||+|+++.+++. ..++..+... .++++++
T Consensus 196 ----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~~-----~~~~i~~ 265 (432)
T 3ei9_A 196 ----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN-PRSIFEIPGA-----EEVAMET 265 (432)
T ss_dssp ----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC-CSSGGGSTTG-----GGTEEEE
T ss_pred ----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC-CCChhhcCCC-----CCeEEEE
Confidence 13788999999999999999999999999999999999999999999887653 3344433221 3678999
Q ss_pred ecCcccCCCCCceeEEEeecCHH-------HHHHHHHcc--ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Q 046900 274 YSLSKDLGLPGFRVGTIYSYNDK-------VVTTARRMS--SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQ 344 (442)
Q Consensus 274 ~S~SK~~g~~G~RiG~i~~~~~~-------~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (442)
+||||.||++|+|+||++++++. +.+.+.+.. .++..++++|.++.+++.+.. .++++++++.++++++
T Consensus 266 ~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~ 343 (432)
T 3ei9_A 266 ASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEG--LEAMHKVIGFYKENTN 343 (432)
T ss_dssp EESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHH--HHHHHHHHHHHHHHHH
T ss_pred ecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHH
Confidence 99999999999999999996654 145544332 235578899999888887532 3568889999999999
Q ss_pred HHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHH
Q 046900 345 MIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLE 424 (442)
Q Consensus 345 ~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~ 424 (442)
++.+.|++.|+++..+.+++|+|++++.. +..+++..|++++||.+.||+.|+..+++++||+++. ++++++
T Consensus 344 ~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~l~ 415 (432)
T 3ei9_A 344 IIIDTFTSLGYDVYGGKNAPYVWVHFPNQ-------SSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG-HRENIL 415 (432)
T ss_dssp HHHHHHHHTTCCEEECSSSSEEEEECTTS-------CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHH
T ss_pred HHHHHHHHCCceecCCCcceEEEEECCCC-------CHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC-CHHHHH
Confidence 99999999999988888888999999832 2567888888877999999999986667899999987 899999
Q ss_pred HHHHHHHHHHH
Q 046900 425 VALKRIHNFMQ 435 (442)
Q Consensus 425 ~~l~~l~~~l~ 435 (442)
+++++|++--.
T Consensus 416 ~~l~rl~~~~~ 426 (432)
T 3ei9_A 416 EACRRFKQLYK 426 (432)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999987543
No 49
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=5.8e-45 Score=360.75 Aligned_cols=350 Identities=17% Similarity=0.239 Sum_probs=278.1
Q ss_pred Cceeeeecccc-----cc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 48 SGVIQMGLAEN-----QV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 48 ~~~i~l~~~~n-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
.++|+|+++.. ++ +++.+.+.+.+... .....|++..|.+++|+++++++.+..+ . .+++
T Consensus 37 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-----------~~~~~Y~~~~g~~~lr~~la~~~~~~~~--~-~~~~ 102 (413)
T 3t18_A 37 EAVINAALGTLLDDKGKIIALPSVYDRLDEMDR-----------SHIASYAPIEGEKDYRKIVIDTLFGPYK--P-EGYI 102 (413)
T ss_dssp GGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCH-----------HHHHSCCCTTCCHHHHHHHHHHHHGGGC--C-SSEE
T ss_pred cceEeccccCccCCCCCcCChHHHHHHHHhcCc-----------ccccCcCCCCCCHHHHHHHHHHHhcccC--c-cccC
Confidence 47899999874 43 34666776665421 1235788888999999999999976543 1 1345
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
+|++|+|+++++..++.+++++||.|+++.|+|+.+...++. .|++++.+|+++++ |.+|++.|++.+++.... ++
T Consensus 103 ~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~--~~ 178 (413)
T 3t18_A 103 SAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEE-FGRNFKTFEFFTDD-FAFNIDVYKEAIDEGIRD--SD 178 (413)
T ss_dssp EEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHH-HTCEEEEECCBCTT-SSBCHHHHHHHHHHHHHH--CS
T ss_pred cEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHH-hCCeEEEeeccCCC-CCcCHHHHHHHHHHHhhc--CC
Confidence 999999999999999999999999999999999999999985 99999999985443 789999999999753211 34
Q ss_pred e-EEEEeCC-CCCCCcCCCHHHHHHHHHHHH------hcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCc--EE
Q 046900 202 R-GVLITNP-SNPLGATIQRSVLEELLDFAT------RKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSER--VH 271 (442)
Q Consensus 202 ~-~v~l~~P-~NPtG~~~~~~~l~~l~~~~~------~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~--vi 271 (442)
+ ++++++| |||||.+++.+++++|+++|+ +|+++||+||+|.++.+++....++...... ..++ ++
T Consensus 179 ~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~----~~~~~~~i 254 (413)
T 3t18_A 179 RIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSN----LPRNLFVV 254 (413)
T ss_dssp EEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTT----CCTTEEEE
T ss_pred CEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhh----cCCCeeEE
Confidence 5 7888899 999999999999999999999 8999999999999998877544444333221 1234 58
Q ss_pred EEecCcccCCCCCceeEEEeec--CHHHHHHHHHcc------ccCCCcHHHHHHHHHHhcCchh--HHHHHHHHHHHHHH
Q 046900 272 IVYSLSKDLGLPGFRVGTIYSY--NDKVVTTARRMS------SFTLISSQTQYLLASMLSNKKF--TENYIKTNRERLQK 341 (442)
Q Consensus 272 ~~~S~SK~~g~~G~RiG~i~~~--~~~~~~~~~~~~------~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~ 341 (442)
+++||||.||++|+|+||++++ ++.+.+.+.... .+..++.++|.++..++++.++ ..++++++++.+++
T Consensus 255 ~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 334 (413)
T 3t18_A 255 VAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKS 334 (413)
T ss_dssp EEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999983 566666655432 1235788999999999987652 24556778899999
Q ss_pred HHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHH
Q 046900 342 RYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQ 421 (442)
Q Consensus 342 ~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e 421 (442)
+++++.+.|++.|+++..+++|+|+|+++.. ..++++.|.+ +||.+.|| ++++||+++..+++
T Consensus 335 ~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~-~gv~v~~g-------~~~iRis~~~~~~~ 397 (413)
T 3t18_A 335 RADVFVTAAKENKLTMIPYFGGFFTFIPTDK---------AFDIVKDLEK-ENIFTIPS-------AKGIRVAICGVGEE 397 (413)
T ss_dssp HHHHHHHHHHHTTCCCBCCCSSSCEEEECSC---------HHHHHHHHHH-TTEECEEC-------SSEEEECTTTSCGG
T ss_pred HHHHHHHHHHHcCCCccCCCceEEEEeCCCC---------HHHHHHHHHh-CCEEEecC-------CCceEEEEeeCCHH
Confidence 9999999999999999999999999998743 5677877755 59999997 46899999865666
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 046900 422 TLEVALKRIHNFMQKRER 439 (442)
Q Consensus 422 ~i~~~l~~l~~~l~~~~~ 439 (442)
++ +++|.+++++.++
T Consensus 398 ~~---l~~l~~~l~~~~~ 412 (413)
T 3t18_A 398 KI---PKLVQRLAFYTNK 412 (413)
T ss_dssp GH---HHHHHHHHHHHHC
T ss_pred HH---HHHHHHHHHHHhc
Confidence 66 9999999887654
No 50
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=1.6e-45 Score=365.73 Aligned_cols=355 Identities=17% Similarity=0.244 Sum_probs=294.5
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|||+++.+.++ ++.+.+.+.+.... ....|++.. .++++++++++.+.++ +++++++|++
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~~--~~l~~~l~~~l~~~~g--~~~~~~~v~~ 124 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGRE-----------HIFGYNYFN--DDLYQAVIDWERKEHD--YAVVKEDILF 124 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHHH-----------CCSSCBCCC--HHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHhc-----------CCcCCCCCC--HHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 568899999987764 35555555443211 124565543 8999999999999877 4467899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC-CCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD-SSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
|+|+++++..++++++++||.|+++.|+|.++...+.. .|.+++.+|++ .+++|.+|++.|++++++ .++++|
T Consensus 125 ~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~d~~~le~~i~~-----~~~~~v 198 (421)
T 3l8a_A 125 IDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRL-NDHRLVENSLQIINGRFEIDFEQLEKDIID-----NNVKIY 198 (421)
T ss_dssp ESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHHH-TTEEEEEEECEEETTEEECCHHHHHHHHHH-----TTEEEE
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHH-CCCEEEeccccccCCCeeeCHHHHHHHhhc-----cCCeEE
Confidence 99999999999999999999999999999999998884 89999999987 566788999999999974 278999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++..+.++..+..+ ..++++++.|+||.+|++|
T Consensus 199 il~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~----~~~~~i~~~s~sK~~g~~G 274 (421)
T 3l8a_A 199 LLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDAS----YKDFTIILSSATKTFNIAG 274 (421)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTT----GGGTEEEEECSHHHHTCGG
T ss_pred EECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCch----hcCcEEEEEeChhhccCch
Confidence 999999999999999999999999999999999999999999887666666555432 1378899999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHcc---ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC
Q 046900 285 FRVGTIYSYNDKVVTTARRMS---SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKG 360 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 360 (442)
+|+||++++++.+.+.+.... .++..+++.+.++.+++... ++++++.++.++++++++.+.|++. ++.+..+
T Consensus 275 ~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~ 351 (421)
T 3l8a_A 275 TKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG---KPWLEELKTVIEGNIKLVIKELEAKTKIKVMEP 351 (421)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECC
T ss_pred hheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCC
Confidence 999999996577777765433 33467888999888888732 4568888999999999999999885 8999999
Q ss_pred CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 361 NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 361 ~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
.+++++|++++.... +..++++.|++++||.+.||+.|+..+++++||+++. +++++++++++|+++++
T Consensus 352 ~~~~~~~v~~~~~~~-----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 352 EGTYLVWLDFSAYAI-----AQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVAT-PKNTVQEALSRIISVFG 420 (421)
T ss_dssp SBSSEEEEECGGGTC-----CTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHC-
T ss_pred CeeEEEEEeccccCC-----CHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 999999999875211 2457888888777999999999976667899999997 89999999999998865
No 51
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=3.6e-44 Score=348.86 Aligned_cols=330 Identities=17% Similarity=0.243 Sum_probs=276.3
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|+|+.++|+++ ++.+.+.+.+... ....|++ .+..++|++++++++ +++++|++|
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~y~~-~~~~~lr~~la~~~~--------~~~~~v~~~ 90 (363)
T 3ffh_A 32 TKITKLSSNENPLGTSKKVAAIQANSSV------------ETEIYPD-GWASSLRKEVADFYQ--------LEEEELIFT 90 (363)
T ss_dssp SCCEECSSCSCTTCCCHHHHHHHHTCBS------------CCCBC-----CHHHHHHHHHHHT--------CCGGGEEEE
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHH------------HhhcCCC-cchHHHHHHHHHHhC--------CChhhEEEe
Confidence 57899999999885 4667776665431 2456754 478999999999986 578999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
+|+++++..++.+++++||+|+++.|+|..+...++. .|++++.+|+++ ++.+|++++++.+++ ++++|++
T Consensus 91 ~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~ 161 (363)
T 3ffh_A 91 AGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALI-EGAEVREIPLLQ--DGEHDLEGMLNAIDE------KTTIVWI 161 (363)
T ss_dssp SSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHH-HTCEEEEEECCT--TSCCCHHHHHHHCCT------TEEEEEE
T ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHH-cCCEEEEecCCC--CCCcCHHHHHHhccc------CCCEEEE
Confidence 9999999999999999999999999999999999885 899999999875 467999999998864 7899999
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR 286 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R 286 (442)
++|+||||.+++.+++.+|++.|++ |+++|+||+|+++.+ +.. .+....... .+++++++|+||.+|++|+|
T Consensus 162 ~~p~nptG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~-~~~~~~~~~-----~~~~i~~~s~sK~~g~~G~r 233 (363)
T 3ffh_A 162 CNPNNPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQP-EKHEKLVRT-----YKNLIITRTFSKIYGLASAR 233 (363)
T ss_dssp ESSCTTTCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCC-CCCGGGGGT-----CTTEEEEEESSSTTCCSSCC
T ss_pred eCCCCCcCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccc-cCHHHHhhc-----CCCEEEEeechhhhcCchhc
Confidence 9999999999999999999998887 999999999998877 432 222223222 57899999999999999999
Q ss_pred eEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh-CCCeeecCCceEE
Q 046900 287 VGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS-AGIECLKGNAGLF 365 (442)
Q Consensus 287 iG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~g~~ 365 (442)
+||+++ ++.+.+.++.....+..+++.|.++.+++++. +++++.++.++++++++.+.|++ .|+++.++.+ +|
T Consensus 234 ~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~~ 307 (363)
T 3ffh_A 234 VGYGIA-DKEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQ----AFIGECRTSNANGIKQYEAFAKRFEKVKLYPANG-NF 307 (363)
T ss_dssp CEEEEE-CHHHHHHHHHTCCSCCCBHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCS-SE
T ss_pred eeeeec-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHhhCCCceECCCCC-eE
Confidence 999999 67788888777777888999999999999864 45778889999999999999999 6888876665 57
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+|++++. +..++++.|.++ ||.+.||+.|+. ++++||+++ +++++++++++|++++
T Consensus 308 ~~~~~~~--------~~~~~~~~l~~~-gi~v~~g~~~~~--~~~iRis~~--~~~~i~~~~~~l~~~l 363 (363)
T 3ffh_A 308 VLIDLGI--------EAGTIFSYLEKN-GYITRSGAALGF--PTAVRITIG--KEEDNSAVIALLEKLL 363 (363)
T ss_dssp EEEECSS--------CHHHHHHHHHHT-TEECEETTTTTC--TTEEEEECC--CHHHHHHHHHHHHHHC
T ss_pred EEEECCC--------CHHHHHHHHHHC-CeEEEeCccCCC--CCeEEEECC--CHHHHHHHHHHHHHhC
Confidence 8999875 267888888776 999999999864 689999998 5889999999998763
No 52
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=7.9e-45 Score=360.78 Aligned_cols=355 Identities=15% Similarity=0.143 Sum_probs=272.3
Q ss_pred ceeeeeccccc---ccHH-HHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 49 GVIQMGLAENQ---VSFD-LLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 49 ~~i~l~~~~n~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
++|+|+.++++ ++.+ .+.+.+.+.. .. .......+|++..|.++||+++|+|++ +++++|+
T Consensus 33 ~~i~l~~g~~~~~~~~~~~~~~~a~~~~~---~~----~~~~~~~~Y~~~~G~~~lr~~ia~~~~--------~~~~~i~ 97 (422)
T 3d6k_A 33 LSLDLTRGKPSAEQLDLSNDLLSLPGGDF---RT----KDGVDCRNYGGLLGIADIRELWAEALG--------LPADLVV 97 (422)
T ss_dssp CCEECCCCSCCHHHHHTTGGGGGCSTTCC---BC----TTCCBTTSSCCSSCCHHHHHHHHHHHT--------CCGGGEE
T ss_pred CeEeCCCCCCChhhCCCcHHHHHHHHHHH---hh----ccchhhhCCCCCCCCHHHHHHHHHHhC--------CChhHEE
Confidence 47999999886 3321 2222221110 00 000134589999999999999999984 6789999
Q ss_pred EecChHHHH--HHHHHhhcCC------------CCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHH
Q 046900 125 VTAGATAAN--ELLTFILADP------------GDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAA 190 (442)
Q Consensus 125 ~t~G~~~ai--~~~~~~l~~~------------gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~ 190 (442)
+|+|+++++ .+++.++..+ +|+|++++|+|+.+...++. .|++++.+|+++++ +|++.|++.
T Consensus 98 ~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~g---~d~~~l~~~ 173 (422)
T 3d6k_A 98 AQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEH-FGFEMINVPMTDEG---PDMGVVREL 173 (422)
T ss_dssp ECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHH-HTCEEEEEEEETTE---ECHHHHHHH
T ss_pred EecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHH-cCCEEEecCCCCCC---CCHHHHHHH
Confidence 999999997 6777888665 34799999999999999985 89999999998643 899999998
Q ss_pred HHHHHhcCCceeEEE-EeCCCCCCCcCCCHHHHHHHHHHHH-hcCcEEEEeccCCc--CCCCCCCcccHHHHHhhhcCCC
Q 046900 191 YKEAESKDMRVRGVL-ITNPSNPLGATIQRSVLEELLDFAT-RKNIHLVSDEIYSG--SAFSSSEFVSIAEILEARQYKD 266 (442)
Q Consensus 191 l~~~~~~~~~~~~v~-l~~P~NPtG~~~~~~~l~~l~~~~~-~~~~~vi~De~y~~--~~~~~~~~~s~~~~~~~~~~~~ 266 (442)
+++ .++++|+ +++||||||.+++.+++++|+++|+ +++++||+||+|.+ +.+++..+.++.++.... +.
T Consensus 174 l~~-----~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~--~~ 246 (422)
T 3d6k_A 174 VKD-----PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAA--GN 246 (422)
T ss_dssp HTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT--TC
T ss_pred Hhc-----CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhcc--CC
Confidence 853 2678887 6899999999999999999999999 99999999999986 444433455665553110 12
Q ss_pred CCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Q 046900 267 SERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQ 344 (442)
Q Consensus 267 ~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (442)
.+++++++||||. +++|+|+||++++ +.+.+.+...... +.+++++|.++..++++.+...+++++.++.++++++
T Consensus 247 ~~~~i~~~S~SK~-~~~GlriG~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 324 (422)
T 3d6k_A 247 PNRFWFMSSTSKI-THAGSGVSFFASS-KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFE 324 (422)
T ss_dssp TTCEEEEEESTTT-SCTTSSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcChhhh-cCcccceEEEEeC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHH
Confidence 4789999999999 5799999999994 6666666554332 5678999999999999833336788889999999999
Q ss_pred HHHHHHHh----CC-CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeC-CCCCCC---CCCCEEEEEe
Q 046900 345 MIIEGLRS----AG-IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISP-GSSCHC---SEPGWFRVCF 415 (442)
Q Consensus 345 ~l~~~L~~----~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~p-g~~f~~---~~~~~iRls~ 415 (442)
.+.+.|.+ .| +.+..|.+|+|+|++++.. +...+...+ +++||.+.| |..|.. ..++++|||+
T Consensus 325 ~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-------~~~~~~~~l-~~~gV~v~~~g~~f~~~~~~~~~~iRis~ 396 (422)
T 3d6k_A 325 RVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG-------TASRVVELA-KEAGIALTGAGSSFPLHNDPNNENIRLAP 396 (422)
T ss_dssp HHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT-------CHHHHHHHH-HHTTEECCCTTTTSGGGCCTTSCEEEECC
T ss_pred HHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC-------CHHHHHHHH-HHCCeEEEcCccccCCCCCCCCCeEEEec
Confidence 99888865 33 6777788999999999753 144566655 455999999 455641 1357999999
Q ss_pred ecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 416 ANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 416 ~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+..+++++++++++|++++++...
T Consensus 397 ~~~~~e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 397 SLPPVAELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 844899999999999999887643
No 53
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=6.7e-45 Score=356.38 Aligned_cols=342 Identities=25% Similarity=0.363 Sum_probs=277.5
Q ss_pred Cceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|||+.+.+.++ ++.+.+.+.+.... ...|++..|..++|++++++++ +++++|++|
T Consensus 25 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~------------~~~y~~~~~~~~l~~~la~~~~--------~~~~~v~~~ 84 (381)
T 1v2d_A 25 LGAVNLGQGFPSNPPPPFLLEAVRRALGR------------QDQYAPPAGLPALREALAEEFA--------VEPESVVVT 84 (381)
T ss_dssp HTCEECCCCSCSSCCCHHHHHHHHHHTTT------------SCSCCCTTCCHHHHHHHHHHHT--------SCGGGEEEE
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHHH------------hcCCCCCCCCHHHHHHHHHhcC--------CChhhEEEc
Confidence 36799999988764 45556555544321 2358877789999999999965 568899999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC--CCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD--SSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~--~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+++++.+++.+++++||+|+++.|+|+.+...++. .|++++.++++ ++ ++.+|++.|++.+.+ ++++|
T Consensus 85 ~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~-~~~~d~~~l~~~l~~------~~~~v 156 (381)
T 1v2d_A 85 SGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFL-AGAKARLVRLDLTPE-GFRLDLSALEKALTP------RTRAL 156 (381)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHH-TTCEEEEEECEEETT-EEECCHHHHHTTCCT------TEEEE
T ss_pred CChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHH-cCCEEEEEeCCCCCc-cCCcCHHHHHHhcCc------CCEEE
Confidence 9999999999999999999999999999999998884 89999999986 32 377999999988753 78999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+ +....++..+ . .++++++.|+||.+|++|
T Consensus 157 ~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~------~~~~~~~~s~sK~~~~~G 228 (381)
T 1v2d_A 157 LLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-A------PERTFTVGSAGKRLEATG 228 (381)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-C------TTTEEEEEEHHHHTTCGG
T ss_pred EECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-c------CCCEEEEeechhhcCCcc
Confidence 9999999999999999999999999999999999999999887 5445566655 2 378899999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 362 (442)
+|+||++++ +.+.+.++.... .+..+++.|.++..+++...+ .+++++.++.++++++++.+.|++.|+++..+.+
T Consensus 229 ~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 306 (381)
T 1v2d_A 229 YRVGWIVGP-KEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARR-EGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEG 306 (381)
T ss_dssp GCCEEEECC-TTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSB
T ss_pred cceEEEEeC-HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCccc-HHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCc
Confidence 999999995 445555543322 456788899988888874321 3467788899999999999999998999988888
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC--CCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC--SEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~--~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
|+|+|++++.. + ...+++++||.+.||+.|+. ..++++||+++. +++++++++++|++++++.+.
T Consensus 307 ~~~~~~~~~~~----------~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 307 TYFLMAELPGW----------D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp SSEEEEECTTC----------C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHHC-----
T ss_pred ceEEEEecChH----------h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhhccc
Confidence 99999998752 1 33444556999999998864 246799999998 999999999999999887654
No 54
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=3.8e-44 Score=347.85 Aligned_cols=322 Identities=18% Similarity=0.292 Sum_probs=263.9
Q ss_pred CceeeeecccccccHH-HHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVSFD-LLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|+|+.++|+++++ .+ .. ....+|++. +..++|+++|++++ +++++|++|
T Consensus 29 ~~~i~l~~~~~~~~~~~~v------a~------------~~~~~Y~~~-~~~~lr~~la~~~~--------~~~~~v~~~ 81 (356)
T 1fg7_A 29 NGDVWLNANEYPTAVEFQL------TQ------------QTLNRYPEC-QPKAVIENYAQYAG--------VKPEQVLVS 81 (356)
T ss_dssp TCSEECSSCCCSSCCCCCC------CC------------CCTTSCCCS-SCHHHHHHHHHHHT--------SCGGGEEEE
T ss_pred CceEEeeCCCCCCCCCHhH------hh------------hhhccCCCc-cHHHHHHHHHHHhC--------CChHHEEEc
Confidence 4689999999988642 11 10 134679876 48999999999984 578899999
Q ss_pred cChHHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 127 AGATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
+|+++++..++++++++| |+|+++.|+|+.+...++. .|++++.+|+++ +|.+|++++++.++ ++++++
T Consensus 82 ~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~~i~-------~~~~v~ 151 (356)
T 1fg7_A 82 RGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAET-IGVECRTVPTLD--NWQLDLQGISDKLD-------GVKVVY 151 (356)
T ss_dssp SHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHH-HTCEEEECCCCT--TSCCCHHHHHTSCT-------TEEEEE
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHH-cCCEEEEeeCCC--CCCCCHHHHHHHhc-------CCCEEE
Confidence 999999999999999999 9999999999999999885 899999999874 57799999987663 578999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++||||||.+++.+++++|+++|+ +++++|+||+|.++.. + .++.++.. ..+++++++||||.||++|+
T Consensus 152 l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~-~---~~~~~~~~-----~~~~~i~~~s~sK~~g~~G~ 221 (356)
T 1fg7_A 152 VCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCP-Q---ASLAGWLA-----EYPHLAILRTLSKAFALAGL 221 (356)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSG-G---GCSGGGTT-----TCTTEEEEEESSSTTCCGGG
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcC-C---CcHHHHHh-----hCCCEEEEecchHhhcCchh
Confidence 9999999999999999999999999 9999999999998652 1 22222222 14789999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCceE
Q 046900 286 RVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECLKGNAGL 364 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~ 364 (442)
|+||+++ ++.+.+.++.....+.+++++|.++.+++++.++ +++++.++.++++++++.+.|++.+ +....+.+++
T Consensus 222 r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 298 (356)
T 1fg7_A 222 RCGFTLA-NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGI--VAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETN 298 (356)
T ss_dssp CCEEEEE-CHHHHHHHHHHSCSSCSCHHHHHHHHHHTSHHHH--HHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSS
T ss_pred hhEEEEe-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCccH--HHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCe
Confidence 9999999 6777777777666678899999999999986443 2478888999999999999999875 2233455677
Q ss_pred EEEEecCCcccccChhhHHHHHHHHHHcCcEEEeC-CCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 365 FCWMNLSPLLEEQTREGELALWDSMLHEVKLNISP-GSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~p-g~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
|+|++++. ..++++.|.++ ||.++| |+.|+. ++++||+++. ++++++++++|+++
T Consensus 299 ~~~~~~~~---------~~~l~~~L~~~-gI~v~~~g~~~~~--~~~iRis~~~--~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 299 YILARFKA---------SSAVFKSLWDQ-GIILRDQNKQPSL--SGCLRITVGT--REESQRVIDALRAE 354 (356)
T ss_dssp EEEEEETT---------HHHHHHHHHHT-TEECEECTTSTTC--TTEEEEECCC--HHHHHHHHHHHHTC
T ss_pred EEEEECCC---------HHHHHHHHHHC-CEEEEECCCCCCC--CCeEEEEeCC--HHHHHHHHHHHHhh
Confidence 99999862 56788888555 999999 887763 4699999985 78899999998754
No 55
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=1.4e-44 Score=358.81 Aligned_cols=345 Identities=15% Similarity=0.236 Sum_probs=270.1
Q ss_pred Cceeeeecc---cccc---cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 48 SGVIQMGLA---ENQV---SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 48 ~~~i~l~~~---~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
+++|||+.+ ++.. +++.+.+.+.+.... .....|++..|.+++|+++++++....+ ..++++
T Consensus 49 ~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~ 116 (420)
T 4f4e_A 49 PTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEA----------GLPRGYLPIDGIAAYDASVQKLLLGDDS--PLIAAG 116 (420)
T ss_dssp SSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHT----------CCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHTT
T ss_pred CCcEEeeeeeeECCCCCccCcHHHHHHHHHHhcc----------CCCCCCCCCCCcHHHHHHHHHHhcCCCc--cccccC
Confidence 478999998 3332 225555555443211 1235798889999999999999975432 223688
Q ss_pred --cEEEecChHHHHHHHH--HhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 --RIVVTAGATAANELLT--FILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 --~i~~t~G~~~ai~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
+|++|+|+++++.+++ .+++++||.|++++|+|..+...++. .|++++.+|+.++.++.+|++.|++.+++.
T Consensus 117 ~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~--- 192 (420)
T 4f4e_A 117 RVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDM-AGFEVVAYPYYDAKTNGVNFDGMLAALNGY--- 192 (420)
T ss_dssp CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHH-TTCCEEEEECEETTTTEECHHHHHHHHTTC---
T ss_pred ceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHH-cCCeEEEeeeeccccCccCHHHHHHHHHhC---
Confidence 9999999999999994 46689999999999999999999985 999999999844456889999999998732
Q ss_pred CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC-CcccHHHHHhhhcCCCCCcEEEEecC
Q 046900 198 DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS-EFVSIAEILEARQYKDSERVHIVYSL 276 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~S~ 276 (442)
..+++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++. ...++..+... .+++++++||
T Consensus 193 ~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~S~ 267 (420)
T 4f4e_A 193 EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAA-----NLNVFVSSSF 267 (420)
T ss_dssp CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHT-----TCCEEEEEEC
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhc-----CCCEEEEEeC
Confidence 23678899999999999999999999999999999999999999999998752 34555555432 5889999999
Q ss_pred cccCCCCCceeEEEee--cCHHHHHH----HHHc--cccCCCcHHHHHHHHHHhcCchhH---HHHHHHHHHHHHHHHHH
Q 046900 277 SKDLGLPGFRVGTIYS--YNDKVVTT----ARRM--SSFTLISSQTQYLLASMLSNKKFT---ENYIKTNRERLQKRYQM 345 (442)
Q Consensus 277 SK~~g~~G~RiG~i~~--~~~~~~~~----~~~~--~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~ 345 (442)
||.||++|+|+||+++ +++.+.+. ++.. ......+.+.|.+++.++.+..+. +++++++++.++++++.
T Consensus 268 SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (420)
T 4f4e_A 268 SKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNG 347 (420)
T ss_dssp TTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999864 44544332 2222 223456788999999999876421 46688899999999999
Q ss_pred HHHHHHhC----CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHH
Q 046900 346 IIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQ 421 (442)
Q Consensus 346 l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e 421 (442)
+.+.|++. |+++..+++|+|+|+.++. .. +..+++++||.+.|+ .||+++.++++
T Consensus 348 l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~-~~~~l~~~gI~v~~~----------~Ris~~~~~~~ 406 (420)
T 4f4e_A 348 LVERLKAAGIERDFSFINAQRGMFSYSGLTS----------AQ-VDRLREEFGIYAVST----------GRICVAALNTR 406 (420)
T ss_dssp HHHHHHHTTCSSCCTHHHHSCSSEEECCCCH----------HH-HHHHHHHHCEECCTT----------SEEEGGGCCTT
T ss_pred HHHHHHhcCCCCCceeECCCccEEEEeCCCH----------HH-HHHHHHhCCEEecCC----------CeEEEecCCHH
Confidence 99999986 7788889999999987742 23 344445559999984 29999876788
Q ss_pred HHHHHHHHHHHHH
Q 046900 422 TLEVALKRIHNFM 434 (442)
Q Consensus 422 ~i~~~l~~l~~~l 434 (442)
++++++++|++++
T Consensus 407 ~i~~~~~~l~~~l 419 (420)
T 4f4e_A 407 NLDVVANAIAAVL 419 (420)
T ss_dssp THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8999999999876
No 56
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=9.2e-45 Score=357.86 Aligned_cols=345 Identities=15% Similarity=0.232 Sum_probs=268.1
Q ss_pred Cceeeeecccc-cc-c----HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 48 SGVIQMGLAEN-QV-S----FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 48 ~~~i~l~~~~n-~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
+++|+|+++.+ .. + .+.+.+.+...... .....|++..|.+++|+++|+++++.++ ..++++
T Consensus 28 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~----------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~ 95 (401)
T 7aat_A 28 SKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAK----------KMDKEYLPIAGLADFTRASAELALGENS--EAFKSG 95 (401)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHT----------TCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHTT
T ss_pred CCceeeeeeeEECCCCCEechHHHHHHHHHhccc----------ccccCCCCCCCCHHHHHHHHHHhcCCCc--cccccC
Confidence 35789998874 22 1 13455444332110 1245798888999999999999987655 456799
Q ss_pred cEEE--ecChHHHHHHHHHhhc---CCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 122 RIVV--TAGATAANELLTFILA---DPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 122 ~i~~--t~G~~~ai~~~~~~l~---~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
+|++ |+|+++++.+++.++. ++||.|++++|+|..+...++. .|++++.+|++.+.++.+|++.+++.+++.
T Consensus 96 ~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-- 172 (401)
T 7aat_A 96 RYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRD-AGLQLQAYRYYDPKTCSLDFTGAMEDISKI-- 172 (401)
T ss_dssp CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHH-TTCEEEEEECEETTTTEECHHHHHHHHTTS--
T ss_pred ceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHH-cCCeeEeeeeeccccCccCHHHHHHHHHhC--
Confidence 9977 9999999999887664 8999999999999999999985 999999999875556889999988888642
Q ss_pred cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC--CcccHHHHHhhhcCCCCCcEEEEe
Q 046900 197 KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS--EFVSIAEILEARQYKDSERVHIVY 274 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~--~~~s~~~~~~~~~~~~~~~vi~~~ 274 (442)
..+++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+... .+++++++
T Consensus 173 -~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~ 246 (401)
T 7aat_A 173 -PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQ-----GIDVVLSQ 246 (401)
T ss_dssp -CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT-----TCCCEEEE
T ss_pred -CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhc-----CCcEEEEe
Confidence 23678999999999999999999999999999999999999999999887653 12334443332 47899999
Q ss_pred cCcccCCCCCceeEEEee--cCHH----HHHHHHHccc--cCCCcHHHHHHHHHHhcCchhH---HHHHHHHHHHHHHHH
Q 046900 275 SLSKDLGLPGFRVGTIYS--YNDK----VVTTARRMSS--FTLISSQTQYLLASMLSNKKFT---ENYIKTNRERLQKRY 343 (442)
Q Consensus 275 S~SK~~g~~G~RiG~i~~--~~~~----~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~~ 343 (442)
||||.||++|+|+||+++ .++. +...++.... ....+.+.|.+++.++.++.+. .+++++.+++++++|
T Consensus 247 S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r 326 (401)
T 7aat_A 247 SYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMR 326 (401)
T ss_dssp ECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999886 2444 3333333222 2445677888888888876432 456788899999999
Q ss_pred HHHHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCC
Q 046900 344 QMIIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMS 419 (442)
Q Consensus 344 ~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~ 419 (442)
+++.+.|++.| +++..|++|+|+|++++. +.+..+++++||.+.|+ +||+++..+
T Consensus 327 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ll~~~gi~v~~~----------~Ris~~~~~ 385 (401)
T 7aat_A 327 TQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKP-----------EQVERLTKEFSIYMTKD----------GRISVAGVA 385 (401)
T ss_dssp HHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGGGCC
T ss_pred HHHHHHHHhcCCCCCCceecCCcceEEecCCCH-----------HHHHHHHHhCCEeccCC----------CeEEeccCC
Confidence 99999999875 667789999999987642 33466666669999763 699998667
Q ss_pred HHHHHHHHHHHHHHH
Q 046900 420 EQTLEVALKRIHNFM 434 (442)
Q Consensus 420 ~e~i~~~l~~l~~~l 434 (442)
++++++++++|++++
T Consensus 386 ~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 386 SSNVGYLAHAIHQVT 400 (401)
T ss_dssp TTTHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHh
Confidence 777999999999875
No 57
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=2.1e-45 Score=362.34 Aligned_cols=351 Identities=21% Similarity=0.275 Sum_probs=266.2
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|+|+.+++.++ ++.+.+.+.+....... ......|++..|..+||+++|+++. +| . +++++|++
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~------~~~~~~y~~~~g~~~lr~~la~~l~--~g--~-~~~~~v~~ 100 (400)
T 3asa_A 32 QHTVINLSIGDTTQPLNASVAEAFASSIARLSS------PTTCRGYGPDFGLPALRQKLSEDFY--RG--F-VDAKEIFI 100 (400)
T ss_dssp TSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTS------SSCCCCCCCTTCCHHHHHHHHHTTS--TT--S-SCGGGEEE
T ss_pred CCceEeccCCCCCCCCCHHHHHHHHHHHhcccc------cccccCCCCCCCCHHHHHHHHHHHH--cC--C-CCHHHEEE
Confidence 457899999987653 34444444332110000 0123568777899999999999964 22 3 57899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcE-EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIK-IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~-v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
|+|+++++..++.. +++||.|+++.|+|+.+...++. .|++ ++.+|+++++++..|++.+ .++++|
T Consensus 101 ~~G~~~al~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~v 167 (400)
T 3asa_A 101 SDGAKVDLFRLLSF-FGPNQTVAIQDPSYPAYLDIARL-TGAKEIIALPCLQENAFFPEFPED-----------THIDIL 167 (400)
T ss_dssp ESCHHHHHHHHHHH-HCSSCEEEEEESCCHHHHHHHHH-TTCSEEEEEECCGGGTTCCCCCTT-----------CCCSEE
T ss_pred ccChHHHHHHHHHH-cCCCCEEEECCCCcHHHHHHHHH-cCCcceEecccchhcCcccChhhc-----------cCccEE
Confidence 99999999997654 47999999999999999988884 8998 9999987655666554321 278899
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.++|.+++++|+++|+++|++||+||+|+++.+++..+.++..+... .+++++++||||.||++|
T Consensus 168 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~s~sK~~g~~G 242 (400)
T 3asa_A 168 CLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDA-----RFCAIEINSFSKPLGFAG 242 (400)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTG-----GGTEEEEEECCGGGTTTT
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCC-----CCceEEEecchhhcCCcc
Confidence 999999999999999999999999999999999999999887765433344433211 257899999999999999
Q ss_pred ceeEEEeecCHH-------HHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 046900 285 FRVGTIYSYNDK-------VVTTARR--MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGI 355 (442)
Q Consensus 285 ~RiG~i~~~~~~-------~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 355 (442)
+|+||++++++. +...... ...++..+++.|.++.+++++. ++++.++.++++++++.+.|++.|+
T Consensus 243 lriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~l~~~L~~~g~ 317 (400)
T 3asa_A 243 IRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL-----PQLEAIHYYRENSDLLRKALLATGF 317 (400)
T ss_dssp CCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT-----TTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999999996554 3333322 1223467899999998888754 3567788899999999999998899
Q ss_pred eeecCCceEEEEEe-cCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 356 ECLKGNAGLFCWMN-LSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 356 ~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
++..+.+|+|+|++ ++.... +.+++..|++++||.+.||+.|+...++++||++.. +++++++++++|++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~ 390 (400)
T 3asa_A 318 EVFGGEHAPYLWVKPTQANIS------DRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLG-KREDILAACERLQMAP 390 (400)
T ss_dssp EEEECSSSSEEEEECCCTTCC------TTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCS-CHHHHHHHHHHHHC--
T ss_pred eeeCCCCceEEEEeccCCCCC------HHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeC-CHHHHHHHHHHHHHHH
Confidence 98888888999999 765322 346777887766999999998875456899999765 8999999999999998
Q ss_pred HHHH
Q 046900 435 QKRE 438 (442)
Q Consensus 435 ~~~~ 438 (442)
++.+
T Consensus 391 ~~~~ 394 (400)
T 3asa_A 391 ALQS 394 (400)
T ss_dssp ----
T ss_pred Hhhh
Confidence 8754
No 58
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=3.5e-43 Score=342.33 Aligned_cols=339 Identities=18% Similarity=0.271 Sum_probs=278.4
Q ss_pred CCCCCCCCCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCcc
Q 046900 40 PYEESTNPSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKF 118 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~ 118 (442)
.|.+.. +.++|+|+.++|+++ ++.+.+.+.+.... .....|++ .+..++|+++|++++ +
T Consensus 23 ~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~-~~~~~l~~~la~~~g--------~ 82 (367)
T 3euc_A 23 AYHVPD-SHGLVKLDAMENPYRLPPALRSELAARLGE----------VALNRYPV-PSSEALRAKLKEVMQ--------V 82 (367)
T ss_dssp CSSCCC-CTTCEECCSSCCCCCCCHHHHHHHHHHHHH----------HHTTCSCC-CCHHHHHHHHHHHHT--------C
T ss_pred CCCCCC-CCCeeEccCCCCCCCCCHHHHHHHHHHhhh----------hhhhcCCC-CcHHHHHHHHHHHhC--------C
Confidence 344443 568899999999874 35555554443210 02346766 488999999999985 3
Q ss_pred -CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 119 -DLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 119 -~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
++++|++|+|+++++.+++.+++++||+|+++.|+|..+...++. .|++++.+|+++ +|.+|++.|++.+++.
T Consensus 83 ~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~~l~~~--- 156 (367)
T 3euc_A 83 PAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQF-AGLEFVGVPLRA--DFTLDRGAMLAAMAEH--- 156 (367)
T ss_dssp CTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHT-TTCEEEEEECCT--TSCCCHHHHHHHHHHH---
T ss_pred CCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHH-cCCeEEEecCCC--CCCCCHHHHHHHhhcc---
Confidence 678999999999999999999999999999999999999998884 999999999876 5679999999999863
Q ss_pred CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc--CcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEec
Q 046900 198 DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK--NIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYS 275 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~--~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S 275 (442)
++++|++++|+||||.+++.+++++|+++|++| |+++|+||+|+++...+ ..+. + . ..+++++++|
T Consensus 157 --~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~~~~--~-~-----~~~~~i~~~s 224 (367)
T 3euc_A 157 --QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--WMSR--L-T-----DFGNLLVMRT 224 (367)
T ss_dssp --CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--SGGG--G-G-----TCTTEEEEEE
T ss_pred --CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--hHHH--H-h-----hCCCEEEEec
Confidence 688999999999999999999999999999999 99999999999866332 2221 1 1 2478899999
Q ss_pred CcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 046900 276 LSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-G 354 (442)
Q Consensus 276 ~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 354 (442)
|||. +++|+|+||+++ ++.+.+.+......+..+++.|.++..+++. .+++++.++.++++++++.+.|+++ |
T Consensus 225 ~sK~-~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~g 298 (367)
T 3euc_A 225 VSKL-GLAGIRLGYVAG-DPQWLEQLDKVRPPYNVNVLTEATALFALEH----VAVLDEQAAQLRAERSRVAEGMAAHGG 298 (367)
T ss_dssp CCCT-TSCSCCEEEEEE-CHHHHHHHGGGCCSSCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred chhh-cccccCceeeee-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999 889999999999 6777777777776777899999999999987 3457788889999999999999988 8
Q ss_pred CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 355 IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 355 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+++.+ .+|+|+|++++. ..++.+.|.++ ||.+.||+.|+...++++||+++ +++++++++++|++++
T Consensus 299 ~~~~~-~~~~~~~~~~~~---------~~~l~~~l~~~-gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 299 VTVFP-SAANFLLARVPD---------AAQTFDRLLAR-KVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAASL 365 (367)
T ss_dssp CEECC-CSSSEEEEECSC---------HHHHHHHHHTT-TEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHHT
T ss_pred cEECC-CCCeEEEEECCC---------HHHHHHHHHHC-CeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHHh
Confidence 88554 556689999872 56778877554 99999999887656789999998 5888999999999876
Q ss_pred H
Q 046900 435 Q 435 (442)
Q Consensus 435 ~ 435 (442)
+
T Consensus 366 ~ 366 (367)
T 3euc_A 366 Q 366 (367)
T ss_dssp C
T ss_pred c
Confidence 3
No 59
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.4e-44 Score=368.36 Aligned_cols=358 Identities=18% Similarity=0.309 Sum_probs=279.3
Q ss_pred ceeeeecccccccHH-HHHHHHHhCCCCcccCCCCCCCCcccccC-CCcchHHHHHHHHHHHHHHhCCCCccC-CCcEEE
Q 046900 49 GVIQMGLAENQVSFD-LLEEYLEQQPEASTWGKGAPGFRENALFQ-DYHGLKSFRQAMASFMEQIRGGRAKFD-LNRIVV 125 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~-~~~i~~ 125 (442)
++|+|+.+.+.++++ .+....+... ...|+ +..|.+++|+++++++.+.++.++.++ +++|++
T Consensus 104 ~~i~l~~g~~~~~~~~~v~a~~~~~~--------------~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~ 169 (533)
T 3f6t_A 104 DAVNYCHTELGLNRDKVVAEWVNGAV--------------ANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFP 169 (533)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHH--------------TCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEE
T ss_pred hheeccCCCCCcCCcHHHHHHHHHHH--------------hCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEE
Confidence 568899888777653 3343333321 02344 667999999999999966533112334 479999
Q ss_pred ecChHHHHHHHHHh-----hcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC--CCCCcCCHHHHHHHHHHHHhcC
Q 046900 126 TAGATAANELLTFI-----LADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS--SNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 126 t~G~~~ai~~~~~~-----l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~--~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
|+|+++++.+++.+ ++++||+|+++.|+|..+...+.. .|++++.++++. +++|.+|++.|++.+.+
T Consensus 170 t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~----- 243 (533)
T 3f6t_A 170 TEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPEL-KDYELVEVDLHSYEKNDWEIEPNEIEKLKDP----- 243 (533)
T ss_dssp EEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGG-GGSEEEEECCCEETTTTSEECHHHHHHHSCT-----
T ss_pred ECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHH-cCCeEEEEEecCCcccCCCCCHHHHHHHhCC-----
Confidence 99999999999998 789999999999999999998885 899999998864 56789999999998754
Q ss_pred CceeEEEEeCCCCCCCcCCCHHHHHHHHHHHH-hcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCc
Q 046900 199 MRVRGVLITNPSNPLGATIQRSVLEELLDFAT-RKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLS 277 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~-~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~S 277 (442)
++++|++++|+||||.+++.+++++|+++|+ +|+++||+||+|+++.++ +.++.... .+++++++|||
T Consensus 244 -~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~---~~~~~~~~-------~~~~i~~~S~S 312 (533)
T 3f6t_A 244 -SIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPN---FKSIYSVV-------PYNTMLVYSYS 312 (533)
T ss_dssp -TEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTT---CCCHHHHS-------GGGEEEEEESH
T ss_pred -CCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccC---ccCHhhcC-------CCCEEEEecCc
Confidence 8899999999999999999999999999999 689999999999988764 33555443 26899999999
Q ss_pred ccCCCCCceeEEEeecCHHHHHHH------------------------------------HHcc--ccCCCcHHHHHH--
Q 046900 278 KDLGLPGFRVGTIYSYNDKVVTTA------------------------------------RRMS--SFTLISSQTQYL-- 317 (442)
Q Consensus 278 K~~g~~G~RiG~i~~~~~~~~~~~------------------------------------~~~~--~~~~~s~~~q~~-- 317 (442)
|.+|++|+|+||++++++.+.+.+ ++.. ...+.+++.|.+
T Consensus 313 K~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a 392 (533)
T 3f6t_A 313 KLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEA 392 (533)
T ss_dssp HHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHH
T ss_pred ccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHH
Confidence 999999999999999765222211 1111 124567788887
Q ss_pred --HHHHhcC----chhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCccccc-C---------hhh
Q 046900 318 --LASMLSN----KKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQ-T---------REG 381 (442)
Q Consensus 318 --~~~~l~~----~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~-~---------~~~ 381 (442)
+...+.. ..+ .++++++++.++++++.+.+.|. .++.+..+++++|+|++++...... . ..+
T Consensus 393 ~~a~~~L~~~~g~~~~-~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~ 470 (533)
T 3f6t_A 393 LFSMTHLLTSTNGGSD-DPYIDIARKLVSERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFE 470 (533)
T ss_dssp HHHHHHHTTCBGGGTB-CHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHHhhhccccch-HHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCC
Confidence 3444541 122 56788999999999999999997 7888888999999999986421100 0 002
Q ss_pred HHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 382 ELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 382 ~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
+.+++..+++++||.+.||+.|+. .++++|||++.++++++++++++|+++++++.++
T Consensus 471 ~~~~~~~ll~~~GV~v~pg~~f~~-~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~~ 528 (533)
T 3f6t_A 471 QVDFLLKLAEKNGVVLVDGVGFGA-KPGELRVSQANLPTEDYALIGKQVLELLKEYYEE 528 (533)
T ss_dssp HHHHHHHHHHHTTSSSCTTEEECS-STTEEEEESSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeCCcccCC-CCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457778888888999999999985 4689999999778999999999999999887654
No 60
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=7.4e-44 Score=348.14 Aligned_cols=313 Identities=21% Similarity=0.343 Sum_probs=269.0
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcE
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIK 168 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~ 168 (442)
..|++..|..+||+++++++. .+++++|++|+|+++++..++.+++++||+|+++.|+|..+...+.. .|++
T Consensus 57 ~~y~~~~g~~~l~~~la~~~~-------~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~-~g~~ 128 (375)
T 3op7_A 57 LNYGWIEGSPAFKKSVSQLYT-------GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKS-LGAE 128 (375)
T ss_dssp CSSCCTTCCHHHHHHHHTTSS-------SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHHH-TTCE
T ss_pred cCCCCCCChHHHHHHHHHHhc-------cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHH-cCCE
Confidence 568888899999999999873 26789999999999999999999999999999999999999988884 9999
Q ss_pred EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 169 v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
++.++++.+++|.+|++.|++++++ ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.++
T Consensus 129 ~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~ 202 (375)
T 3op7_A 129 VDLWQIEEENGWLPDLEKLRQLIRP------TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL 202 (375)
T ss_dssp EEEEEEEGGGTTEECHHHHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS
T ss_pred EEEEeccccCCCCCCHHHHHHhhcc------CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc
Confidence 9999998777889999999998864 7899999999999999999999999999999999999999999998765
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCch
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKK 326 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~ 326 (442)
...++.+. .+++++++||||.+|++|+|+||+++ ++.+.+.++..... ...+++.|.++...++.
T Consensus 203 --~~~~~~~~--------~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 269 (375)
T 3op7_A 203 --DVPSIIEV--------YDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVTDILRDYRDYTMICAGVFDDLVAQLALAH-- 269 (375)
T ss_dssp --CCCCHHHH--------CTTEEEEEESSSSSSCGGGCCEEEEC-CHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHT--
T ss_pred --CCCchhhh--------cCCEEEEeEChhhcCCcccceEEEEe-CHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhc--
Confidence 33444433 36789999999999999999999999 77787777655443 44577888888888874
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC
Q 046900 327 FTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC 405 (442)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~ 405 (442)
.++++++.++.++++++.+.+.|++. ++.+..+.+++++|+.++... +..+++..+++++||.+.||+.|+.
T Consensus 270 -~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gi~v~~g~~~~~ 342 (375)
T 3op7_A 270 -YQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDM------PMEDFCLQLLQEHGVLLVPGNRFER 342 (375)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSS------CHHHHHHHHHHHHCEECEEGGGGTC
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCC------CHHHHHHHHHHhCCEEEeChhhhCC
Confidence 25567888899999999999999886 788888889989998887533 2678888887666999999998864
Q ss_pred CCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 406 SEPGWFRVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 406 ~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
++++||+++. +.+++++++++|.+++++..
T Consensus 343 --~~~iRi~~~~-~~~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 343 --DGYVRLGFAC-EQETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp --TTEEEECCCS-CHHHHHHHHHHHHHHHGGGC
T ss_pred --CCeEEEEecC-CHHHHHHHHHHHHHHHHHHh
Confidence 6899999997 67899999999999987654
No 61
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=1.9e-43 Score=344.03 Aligned_cols=336 Identities=17% Similarity=0.256 Sum_probs=267.7
Q ss_pred CCCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 46 NPSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
++.++|||+.++++++ ++.+.+.+.+... ....|++ .|..++|+++|++++ +++++|+
T Consensus 22 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~------------~~~~y~~-~~~~~l~~~la~~~~--------~~~~~v~ 80 (364)
T 1lc5_A 22 SPDQLLDFSANINPLGMPVSVKRALIDNLD------------CIERYPD-ADYFHLHQALARHHQ--------VPASWIL 80 (364)
T ss_dssp CGGGSEECSSCCCTTCCCHHHHHHHHHTGG------------GGGSCCC-TTCHHHHHHHHHHHT--------SCGGGEE
T ss_pred CccceEEeccccCCCCCCHHHHHHHHHHHH------------HhhcCCC-CCHHHHHHHHHHHHC--------cCHHHEE
Confidence 3457899999988763 4556666665431 1356865 478999999999984 5688999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++.+++.++ +||.|+++.|+|..+...++. .|++++.+|++++++|.+ ++.+.+.+. .+++++
T Consensus 81 ~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~-l~~~~~~~~------~~~~~v 150 (364)
T 1lc5_A 81 AGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQ-SGCEIRRWSLREADGWQL-TDAILEALT------PDLDCL 150 (364)
T ss_dssp EESSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHHHH-TTCEEEEEECCGGGTTCC-CTTHHHHCC------TTCCEE
T ss_pred ECCCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHHHH-cCCeEEEEeCCcccccch-hHHHHHhcc------CCCCEE
Confidence 9999999999999998 779999999999999998884 899999999875445554 454444332 367889
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++.... .... ..+++++++|+||.+|++|
T Consensus 151 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~---~~~~-----~~~~~i~~~s~sK~~~~~G 222 (364)
T 1lc5_A 151 FLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFI---PALK-----DNPHIWVLRSLTKFYAIPG 222 (364)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSG---GGCT-----TCTTEEEEEESTTTTTCTT
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchh---hHhc-----cCCCEEEEEECchhhcCCc
Confidence 9999999999999999999999999999999999999998877532221 1111 1478899999999999999
Q ss_pred ceeEEEe-ecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc
Q 046900 285 FRVGTIY-SYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNA 362 (442)
Q Consensus 285 ~RiG~i~-~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 362 (442)
+|+||++ + ++.+.+.++.....+..++++|.++.++++.. +++++.++.++++++++.+.|++. |+++.++.
T Consensus 223 ~r~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~- 296 (364)
T 1lc5_A 223 LRLGYLVNS-DDAAMARMRRQQMPWSVNALAALAGEVALQDS----AWQQATWHWLREEGARFYQALCQLPLLTVYPGR- 296 (364)
T ss_dssp TCCEEEECC-CHHHHHHHHHHSCTTCSCHHHHHHHHHGGGCH----HHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCS-
T ss_pred cceEEEEEC-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCC-
Confidence 9999999 7 67777777766666778999999999999873 357888899999999999999987 88876555
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
|+|+|++++.. ..++++.|+++ ||.+.||+.|+...++++||+++. .++++++++.|+++++++
T Consensus 297 g~~~~~~~~~~--------~~~l~~~l~~~-gi~v~~g~~~~~~~~~~iRis~~~--~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 297 ANYLLLRCERE--------DIDLQRRLLTQ-RILIRSCANYPGLDSRYYRVAIRS--AAQNERLLAALRNVLTGI 360 (364)
T ss_dssp SSEEEEEESCT--------TCCHHHHHHTT-TEECEECTTSTTCCTTEEEEECCC--HHHHHHHHHHHHHHC---
T ss_pred CeEEEEECCCc--------HHHHHHHHHHC-CcEEeeCcccCCCCCCEEEEEeCC--HHHHHHHHHHHHHHhhcc
Confidence 45788888641 23577777766 999999999875556899999975 777999999999887764
No 62
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=5.5e-44 Score=351.69 Aligned_cols=345 Identities=16% Similarity=0.226 Sum_probs=269.9
Q ss_pred CCceeeeeccc---ccc--c-HHHHHHHHHh-CCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 47 PSGVIQMGLAE---NQV--S-FDLLEEYLEQ-QPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 47 ~~~~i~l~~~~---n~~--~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
.+++|||+.+. +.. + ++.+.+.+.+ .... .....|++..|..++|+++++++....+ ..++
T Consensus 25 ~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~----------~~~~~y~~~~g~~~lr~~la~~~~~~~~--~~~~ 92 (397)
T 3fsl_A 25 RSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQP----------HGASLYLPMEGLNCYRHAIAPLLFGADH--PVLK 92 (397)
T ss_dssp CSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSC----------CCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHH
T ss_pred CCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCc----------cccccCCCCCchHHHHHHHHHHHhcCCc--cccc
Confidence 35789999994 322 2 1555555554 3211 1235788888999999999999975432 2236
Q ss_pred CC--cEEEecChHHHHHHHH--HhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 120 LN--RIVVTAGATAANELLT--FILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 120 ~~--~i~~t~G~~~ai~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
++ +|++|+|+++++.+++ .+++++||+|+++.|+|..+...++. .|++++.+++..++++.+|++.|++.+++.
T Consensus 93 ~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~- 170 (397)
T 3fsl_A 93 QQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAG-AGFEVSTYPWYDEATNGVRFNDLLATLKTL- 170 (397)
T ss_dssp TTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHH-TTCCEEEECCEETTTTEECHHHHHHHHTTC-
T ss_pred ccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHH-cCCceEEEeeeeccCCcCcHHHHHHHHHhC-
Confidence 88 9999999999999995 45678999999999999999999885 999999999854456889999999998742
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC-CCcccHHHHHhhhcCCCCCcEEEEe
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS-SEFVSIAEILEARQYKDSERVHIVY 274 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~-~~~~s~~~~~~~~~~~~~~~vi~~~ 274 (442)
..+++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++ ....++..+... .+++++++
T Consensus 171 --~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~ 243 (397)
T 3fsl_A 171 --QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASA-----GLPALVSN 243 (397)
T ss_dssp --CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHT-----TCCEEEEE
T ss_pred --CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhc-----CCCEEEEe
Confidence 2367888999999999999999999999999999999999999999998863 234455555432 58899999
Q ss_pred cCcccCCCCCceeEEEee--cCHHHHH-HHHHc-----cccCCCcHHHHHHHHHHhcCchhH---HHHHHHHHHHHHHHH
Q 046900 275 SLSKDLGLPGFRVGTIYS--YNDKVVT-TARRM-----SSFTLISSQTQYLLASMLSNKKFT---ENYIKTNRERLQKRY 343 (442)
Q Consensus 275 S~SK~~g~~G~RiG~i~~--~~~~~~~-~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~~ 343 (442)
||||.+|++|+|+||+++ +++.+.. ..... ......+.++|.+++.++.+..+. .+++++.++.+++++
T Consensus 244 S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 323 (397)
T 3fsl_A 244 SFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMR 323 (397)
T ss_dssp ECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999975 3444443 22221 223445778999999999875432 456788899999999
Q ss_pred HHHHHHHHhC----CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCC
Q 046900 344 QMIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMS 419 (442)
Q Consensus 344 ~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~ 419 (442)
+++.+.|++. |+++..+++|+|+|++++. +....+++++||.+.||. ||+++..+
T Consensus 324 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gi~v~~g~----------Ris~~~~~ 382 (397)
T 3fsl_A 324 QELVKVLSTEMPERNFDYLLNQRGMFSYTGLSA-----------AQVDRLREEFGVYLIASG----------RMCVAGLN 382 (397)
T ss_dssp HHHHHHHHHHCTTSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHTTCEECCTTC----------EEEGGGCC
T ss_pred HHHHHHHHhcCCCCCceeecCCceEEEecCCCH-----------HHHHHHHHhCCEEECCCC----------eEEEEecC
Confidence 9999999886 6888888999999987742 224455566799999863 99998767
Q ss_pred HHHHHHHHHHHHHH
Q 046900 420 EQTLEVALKRIHNF 433 (442)
Q Consensus 420 ~e~i~~~l~~l~~~ 433 (442)
++++++++++|+++
T Consensus 383 ~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 383 TANVQRVAKAFAAV 396 (397)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHhh
Confidence 88899999999876
No 63
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.5e-43 Score=351.66 Aligned_cols=325 Identities=16% Similarity=0.207 Sum_probs=262.9
Q ss_pred cccc-CCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHH--HHHHhhcC--C---------CCeEEEcCCC
Q 046900 88 NALF-QDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANE--LLTFILAD--P---------GDALLVPTPY 153 (442)
Q Consensus 88 ~~~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~--~~~~~l~~--~---------gd~Vl~~~p~ 153 (442)
...| ++..|.++||+++|++++ +++++|++|+|+++++. +++.++++ + ||.|+++.|+
T Consensus 62 ~~~Yp~~~~g~~~lr~~ia~~~~--------~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~ 133 (423)
T 3ez1_A 62 LRNYPGGVAGLPSARALFAGYLD--------VKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPG 133 (423)
T ss_dssp TTSSCSCTTCCHHHHHHHHHHTT--------SCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESC
T ss_pred hhCCCCCCCChHHHHHHHHHHhC--------CChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCC
Confidence 4679 788899999999999974 67899999999999998 88888887 7 5999999999
Q ss_pred CcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCCcCCCHHHHHHHHHHH-Hh
Q 046900 154 YPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT-NPSNPLGATIQRSVLEELLDFA-TR 231 (442)
Q Consensus 154 y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~-~P~NPtG~~~~~~~l~~l~~~~-~~ 231 (442)
|..+...+.. .|++++.+|++++ .+|++.|++++++ ..++++|+++ +||||||.+++.+++++|+++| ++
T Consensus 134 y~~~~~~~~~-~g~~~~~v~~~~~---g~d~~~l~~~l~~----~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~ 205 (423)
T 3ez1_A 134 YDRHFLLLQT-LGFELLTVDMQSD---GPDVDAVERLAGT----DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAA 205 (423)
T ss_dssp CHHHHHHHHH-HTCEEEEEEEETT---EECHHHHHHHHHS----CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSS
T ss_pred cHHHHHHHHH-cCCEEEeccCCCC---CCCHHHHHHHHhh----CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhc
Confidence 9999999885 8999999999864 3899999999852 2378888654 8899999999999999999999 99
Q ss_pred cCcEEEEeccCCcCCCCC---CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc--
Q 046900 232 KNIHLVSDEIYSGSAFSS---SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS-- 306 (442)
Q Consensus 232 ~~~~vi~De~y~~~~~~~---~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~-- 306 (442)
||++||+||+|..+.|.+ ..+.++.++.... +..+++++++||||.+ ++|+|+||+++ ++.+.+.+.....
T Consensus 206 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~sK~~-~~G~r~G~~~~-~~~~~~~~~~~~~~~ 281 (423)
T 3ez1_A 206 PDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDA--GYPDRAFVFASTSKIT-FAGAGLGFVAS-SEDNIRWLSKYLGAQ 281 (423)
T ss_dssp TTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHH--TCTTSEEEEEESTTTS-CSSSSCEEEEE-CHHHHHHHHHHHHHS
T ss_pred cCCEEEEECCcchhhcCCCCCCCCcchhhhhhcc--CCCCeEEEEeCchhhc-cCCcceEEEEe-CHHHHHHHHHHHhhh
Confidence 999999999999765544 2345666653210 1257899999999994 69999999999 5566666654432
Q ss_pred cCCCcHHHHHHHHHHhcC-chhHHHHHHHHHHHHHHHHHHHHHHHHh----CC--CeeecCCceEEEEEecCCcccccCh
Q 046900 307 FTLISSQTQYLLASMLSN-KKFTENYIKTNRERLQKRYQMIIEGLRS----AG--IECLKGNAGLFCWMNLSPLLEEQTR 379 (442)
Q Consensus 307 ~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g--~~~~~~~~g~~~~~~~~~~~~~~~~ 379 (442)
.+..+++.|.++..++++ ...+.+++++.++.++++++.+.+.|.+ .| +.+..|.+|+|+|++++..
T Consensus 282 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~------ 355 (423)
T 3ez1_A 282 SIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP------ 355 (423)
T ss_dssp CSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS------
T ss_pred ccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC------
Confidence 356788999999999987 2334677888888999998888887765 44 6777889999999999863
Q ss_pred hhHHHHHHHHHHcCcEEEeC-CCCCCC---CCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 380 EGELALWDSMLHEVKLNISP-GSSCHC---SEPGWFRVCFANMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 380 ~~~~~l~~~l~~~~gi~v~p-g~~f~~---~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
+...+...|.++ ||.+.| |+.|+. ..++++||+++..+++++++++++|++++++...+
T Consensus 356 -~~~~~~~~l~~~-gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~~ 418 (423)
T 3ez1_A 356 -VADRVVKLAEAA-GVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRLATEE 418 (423)
T ss_dssp -CHHHHHHHHHHT-TEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cHHHHHHHHHHC-CcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 245666666554 999999 666653 24689999998558999999999999999876543
No 64
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=2.1e-47 Score=375.62 Aligned_cols=354 Identities=20% Similarity=0.255 Sum_probs=286.4
Q ss_pred CceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|+|+++++.++. +.+.+.+.+.... ....|++. ..++|+++++++.+.++ +++++++|++|
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~y~~~--~~~l~~~la~~l~~~~g--~~~~~~~v~~~ 95 (392)
T 3b1d_A 31 PQLLPAWIADMDFEVMPEVKQAIHDYAEQ-----------LVYGYTYA--SDELLQAVLDWEKSEHQ--YSFDKEDIVFV 95 (392)
Confidence 478999999876643 4444444433211 13467664 78999999999987665 44678999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC-CCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS-SNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~-~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
+|+++++.+++.+++++||.|+++.|+|..+...+.. .|++++.+++++ +++|.+|++.|++.+++ .++++++
T Consensus 96 ~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~-----~~~~~v~ 169 (392)
T 3b1d_A 96 EGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRL-NNRKLVSNSLKEENGLFQIDFEQLENDIVE-----NDVKLYL 169 (392)
Confidence 9999999999999999999999999999999988884 899999999853 34588999999998863 1678899
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.+++++|+++|++||++||+||+|.++.+++..+.++..+..+ ..+++++++||||.+|++|+
T Consensus 170 ~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G~ 245 (392)
T 3b1d_A 170 LCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPD----FKDFALVLSSATKTFNIAGT 245 (392)
Confidence 99999999999999999999999999999999999999998876555566555431 13788999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccccC---CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeeecC
Q 046900 286 RVGTIYSYNDKVVTTARRMSSFT---LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS-A-GIECLKG 360 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~ 360 (442)
|+||++++++.+.+.+......+ .+++++|.++.+++... .+++++.++.++++++.+.+.|++ . ++++..+
T Consensus 246 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 322 (392)
T 3b1d_A 246 KNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG---KPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKP 322 (392)
Confidence 99999996665666665544432 45778888888888753 346788889999999999999987 4 8888889
Q ss_pred CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 361 NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 361 ~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
.+++++|++++.... +..++++.|++++||.+.||..|+...++++||+++. +++++++++++|+++++
T Consensus 323 ~~~~~~~i~~~~~~~-----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 323 QGTYLIWLDFSDYGL-----TDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCCLP 391 (392)
Confidence 999999999875210 2567888887556999999999975556899999997 78899999999998875
No 65
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=2.1e-43 Score=349.86 Aligned_cols=357 Identities=20% Similarity=0.258 Sum_probs=268.7
Q ss_pred CceeeeecccccccH---HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 48 SGVIQMGLAENQVSF---DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
.++|+|+.+.+...+ +.+.+.+.+...... .......|++..|..+||+++|+|+.+.+| +.+++++|+
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~ 102 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGK------AADALCNYDGPQGKTALLNALAVLLRETLG--WDIEPQNIA 102 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTH------HHHHHHSTTCTTSHHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhCCc------ccceeeccCCCCCcHHHHHHHHHHHHHHhC--CCCCcccEE
Confidence 578999999876633 344444443211000 000124799999999999999999998877 557899999
Q ss_pred EecChHHHHHHHHHhhcCCCC-----eEEEc-CCCCcChHHhHhh-----hcCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 125 VTAGATAANELLTFILADPGD-----ALLVP-TPYYPGFDRDLRW-----RTGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd-----~Vl~~-~p~y~~~~~~~~~-----~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
+|+|+++++.+++++++++|| .|+++ +|+|+.+...+.. ..+..+..++.+. .+|.+|++.|+ +.
T Consensus 103 ~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~--~~- 178 (417)
T 3g7q_A 103 LTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQ-FKYHVDFEHLH--IG- 178 (417)
T ss_dssp EESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGE-EEEECCGGGCC--CC-
T ss_pred EeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcc-cccccCHHHhc--cc-
Confidence 999999999999999999987 89997 9999998765421 1344555555331 24678988887 33
Q ss_pred HHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEE
Q 046900 194 AESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIV 273 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~ 273 (442)
.+++++++++||||||.+++.+++++|+++|++||++||+||+|+.+.. +..+... .. ...++++++
T Consensus 179 -----~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~-~~~~~~~---~~----~~~~~~i~~ 245 (417)
T 3g7q_A 179 -----EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFP-GIIFSEA---RP----LWNPNIILC 245 (417)
T ss_dssp -----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTT-CCBCSCC---CC----CCCTTEEEE
T ss_pred -----cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccc-ccccccc---cc----CCCCCEEEE
Confidence 3789999999999999999999999999999999999999999986321 1111110 01 124789999
Q ss_pred ecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHHHHH-HHHHHHHHHHHHHHHH
Q 046900 274 YSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENYIKT-NRERLQKRYQMIIEGL 350 (442)
Q Consensus 274 ~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~L 350 (442)
+|||| ++++|+|+||+++ ++.+.+.+...... +..+++.|.++..++++.++ .++..+ +++.++++++.+.+.|
T Consensus 246 ~s~sK-~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 322 (417)
T 3g7q_A 246 MSLSK-LGLPGSRCGIIIA-NDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDL-LRLSETVIKPFYYQRVQQTIAII 322 (417)
T ss_dssp EESGG-GTCTTSCCEEEEC-CHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCH-HHHHHHTHHHHHHHHHHHHHHHH
T ss_pred Eechh-ccCCCcceEEEEe-CHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcch-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 5789999999998 56677666554332 45688999999999998776 444444 7888999999998888
Q ss_pred HhC----CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCC-------CCEEEEEeecCC
Q 046900 351 RSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSE-------PGWFRVCFANMS 419 (442)
Q Consensus 351 ~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~-------~~~iRls~~~~~ 419 (442)
.+. ++.+..+++|+|+|++++.... +..++++.|.++ ||.+.||+.|+... ++++||+++. +
T Consensus 323 ~~~l~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~ 395 (417)
T 3g7q_A 323 RRYLSEERCLIHKPEGAIFLWLWFKDLPI-----TTELLYQRLKAR-GVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-E 395 (417)
T ss_dssp HHHCCTTTCEEECCCBSSEEEEECTTCSS-----CHHHHHHHHHHT-TEECEEGGGGCTTBSSCCGGGGGEEEEESCS-C
T ss_pred HHhcccCCceeeCCCcceEEEEEcCCCCC-----CHHHHHHHHHHC-CEEEECchhhCCCCccccccCCCeEEEEecC-C
Confidence 763 5788889999999999986211 266788888555 99999999886532 4799999998 9
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 046900 420 EQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 420 ~e~i~~~l~~l~~~l~~~~~ 439 (442)
++++++++++|++++++..+
T Consensus 396 ~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 396 PDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988754
No 66
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=1.9e-43 Score=349.49 Aligned_cols=344 Identities=15% Similarity=0.221 Sum_probs=265.5
Q ss_pred Cceeeeecccc-ccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcE--
Q 046900 48 SGVIQMGLAEN-QVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRI-- 123 (442)
Q Consensus 48 ~~~i~l~~~~n-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i-- 123 (442)
+++|+|+++.+ .++ ++.+.+.+.+... .....|++..|.++||+++++|+....+ ..+++++|
T Consensus 41 ~~~i~l~~g~~~d~~~~~~v~~a~~~a~~-----------~~~~~y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~~ 107 (409)
T 4eu1_A 41 KRKVNLSIGVYRDDADQPFVLECVKQATL-----------GTNMDYAPVTGIASFVEEAQKLCFGPTC--AALRDGRIAS 107 (409)
T ss_dssp SSCEECCCSSCCCTTSCCCCCHHHHTCCC-----------CSCCCCCCTTCCHHHHHHHHHHHHCSSC--HHHHTTCEEE
T ss_pred cCceeeeeeEEECCCCCEeecHHHHhcCc-----------cccccCCCCCCcHHHHHHHHHHHcCCCc--hhhccCceee
Confidence 47899999875 332 2233333333311 1245788889999999999999852111 11237788
Q ss_pred EEecChHHHHHHH---HHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 124 VVTAGATAANELL---TFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 124 ~~t~G~~~ai~~~---~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..|.|+++++.++ +.+++++||.|++++|+|..+...++. .|++++.+|++.+++|.+|++.|++.+++. ..+
T Consensus 108 ~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~ 183 (409)
T 4eu1_A 108 CQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAK-AGMELTPYSYYDPATKGLNLAGMLECLDKA---PEG 183 (409)
T ss_dssp EEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHH-TTCEEEEECCEETTTTEECHHHHHHHHHHS---CTT
T ss_pred eecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHH-cCCeEEEEEeecCcCCcCcHHHHHHHHHhC---CCC
Confidence 4589989888865 556778999999999999999999985 999999999865567899999999999752 124
Q ss_pred eeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC--CcccHHHHHhhhcCCCCCcEEEEecCcc
Q 046900 201 VRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS--EFVSIAEILEARQYKDSERVHIVYSLSK 278 (442)
Q Consensus 201 ~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~--~~~s~~~~~~~~~~~~~~~vi~~~S~SK 278 (442)
++++++++||||||.+++.+++++|+++|++||++||+||+|+++.+++. ...++..+... .+++++++||||
T Consensus 184 ~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~S~SK 258 (409)
T 4eu1_A 184 SVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDM-----VPNLIVAQSFSK 258 (409)
T ss_dssp CEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTT-----SSCCEEEEECTT
T ss_pred cEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhh-----CCcEEEEecCcc
Confidence 56677799999999999999999999999999999999999999887652 12344444332 478899999999
Q ss_pred cCCCCCceeEEE--eecCHH----HHHHHHHcc--ccCCCcHHHHHHHHHHhcCchhH---HHHHHHHHHHHHHHHHHHH
Q 046900 279 DLGLPGFRVGTI--YSYNDK----VVTTARRMS--SFTLISSQTQYLLASMLSNKKFT---ENYIKTNRERLQKRYQMII 347 (442)
Q Consensus 279 ~~g~~G~RiG~i--~~~~~~----~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~ 347 (442)
.||++|+|+||+ +++++. +.+.++... .....+++.|.++..++++.... .+++++.++.++++++++.
T Consensus 259 ~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 338 (409)
T 4eu1_A 259 NFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLV 338 (409)
T ss_dssp TSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999997 565666 545544432 23456789999999999886432 3447788999999999999
Q ss_pred HHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHH
Q 046900 348 EGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTL 423 (442)
Q Consensus 348 ~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i 423 (442)
+.|++.| +++..+++|+|+|++++. +++..+++++||.+.|| .||+++..+++++
T Consensus 339 ~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ll~~~gv~v~p~----------~Ri~~~~~~~~~i 397 (409)
T 4eu1_A 339 SELKACGSVHDWSHIERQVGMMAYTGLTR-----------EQVELLRSEYHIYMTLN----------GRAAVSGLNSTNV 397 (409)
T ss_dssp HHHHHTTCCSCCHHHHHSCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGGGCCTTTH
T ss_pred HHHHhcCCCCCcceecCCceEEEEeCCCH-----------HHHHHHHHcCCEEEcCC----------CEEEEEecCHhhH
Confidence 9999987 777789999999976542 45677777669999985 3899987688889
Q ss_pred HHHHHHHHHHH
Q 046900 424 EVALKRIHNFM 434 (442)
Q Consensus 424 ~~~l~~l~~~l 434 (442)
++++++|++++
T Consensus 398 ~~~~~~l~~~l 408 (409)
T 4eu1_A 398 EYVSQAIHNVT 408 (409)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 67
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=1.7e-42 Score=336.57 Aligned_cols=333 Identities=18% Similarity=0.279 Sum_probs=269.2
Q ss_pred CCCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 46 NPSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
++.++|||+.++|+++ ++.+.+.+.+... ....|++ .+..++|+++|++++ +++++|+
T Consensus 24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~------------~~~~y~~-~~~~~l~~~la~~~~--------~~~~~i~ 82 (361)
T 3ftb_A 24 KGRELLDYSSNINPLGIPKSFLNNIDEGIK------------NLGVYPD-VNYRRLNKSIENYLK--------LKDIGIV 82 (361)
T ss_dssp ----CEETTCCCCTTCSCHHHHTTHHHHHH------------GGGSCCC-TTCHHHHHHHHHHHT--------CCSCEEE
T ss_pred CCCCEEEecCCCCCCCCCHHHHHHHHHHHH------------HhcCCCC-ccHHHHHHHHHHHhC--------CCcceEE
Confidence 4568899999998874 3444444443221 1345754 578999999999985 6789999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
+|+|+++++.+++.++ |+|+++.|+|..+...++. .|++++.++++++++ ++++++++.++ +++++
T Consensus 83 ~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~--~~~~~l~~~l~-------~~~~v 148 (361)
T 3ftb_A 83 LGNGASEIIELSISLF----EKILIIVPSYAEYEINAKK-HGVSVVFSYLDENMC--IDYEDIISKID-------DVDSV 148 (361)
T ss_dssp EESSHHHHHHHHHTTC----SEEEEEESCCTHHHHHHHH-TTCEEEEEECCTTSC--CCHHHHHHHTT-------TCSEE
T ss_pred EcCCHHHHHHHHHHHc----CcEEEecCChHHHHHHHHH-cCCeEEEeecCcccC--CCHHHHHHhcc-------CCCEE
Confidence 9999999999999888 8999999999999999885 899999999987654 56688888775 27899
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||||.+++.+++++|+++|++||+++|+||+|+++.++ . ..+...... ..+++++++|+||.+|++|
T Consensus 149 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~-~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G 221 (361)
T 3ftb_A 149 IIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-P-SSSFVGEIK-----NYSCLFIIRAMTKFFAMPG 221 (361)
T ss_dssp EEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-T-TSSSGGGTT-----TCSSEEEEEESSSTTSCGG
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-c-ccchhHhcc-----cCCCEEEEeeChhhcCCCC
Confidence 99999999999999999999999999999999999999998875 2 223222222 2478899999999999999
Q ss_pred ceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eecCCc
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIE-CLKGNA 362 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~ 362 (442)
+|+||+++.++.+.+.++.....+..+++.|.++.+++++. +++++.++.++++++.+.+.|+++ ++. +.++.+
T Consensus 222 ~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 297 (361)
T 3ftb_A 222 IRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAINCLKDT----NYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHA 297 (361)
T ss_dssp GCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHHTSSCH----HHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSS
T ss_pred cceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCC
Confidence 99999994478888888877777788999999999999863 457888899999999999999988 787 666665
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+ |+|++++.. +..++++.|.++ ||.+.||+.|+...++++||+++. .++++++++.|+++.+
T Consensus 298 ~-~~~~~~~~~-------~~~~l~~~l~~~-gi~v~~g~~~~~~~~~~iRis~~~--~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 298 N-FVLCRLENI-------SGEKLYDSLLKE-DIVIRRCCNFIGLDDSFVRFAIKD--EKKNTKFLRALKGVEN 359 (361)
T ss_dssp S-EEEEEESSS-------CHHHHHHHHHTT-TEECEECTTSTTCCTTEEEEECCC--HHHHHHHHHHHHHHHH
T ss_pred e-EEEEEcCCC-------CHHHHHHHHHHC-CeEEeeCccCCCCCCCEEEEEcCC--HHHHHHHHHHHHHHHh
Confidence 5 788888761 267888888877 999999999986667899999984 6677777777777654
No 68
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=1.4e-42 Score=343.47 Aligned_cols=348 Identities=16% Similarity=0.201 Sum_probs=267.9
Q ss_pred CCceeeeecccc------cccHHHHHHHHHh-CCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 47 PSGVIQMGLAEN------QVSFDLLEEYLEQ-QPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 47 ~~~~i~l~~~~n------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
..++|||+.+.. ..+++.+.+.+.+ .... .....|++..|..++|+++++++.+.++ +.++
T Consensus 28 ~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~----------~~~~~y~~~~g~~~lr~~ia~~~~~~~~--~~~~ 95 (412)
T 1yaa_A 28 RATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDS----------SYNHEYLGITGLPSLTSNAAKIIFGTQS--DALQ 95 (412)
T ss_dssp CSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCT----------TCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHH
T ss_pred CCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCc----------ccccCCCCCCCcHHHHHHHHHHHhcCCC--CCCC
Confidence 356789998763 1344666666655 4321 1235688888999999999999975433 3457
Q ss_pred CCcEEE--ecChHHHHHHHH--HhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 120 LNRIVV--TAGATAANELLT--FILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 120 ~~~i~~--t~G~~~ai~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
+++|++ |+|+++++.+++ ..++.+||+|+++.|+|+.+...++. .|++++.+++.++.++.+|++.|++.+++.
T Consensus 96 ~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~- 173 (412)
T 1yaa_A 96 EDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFEN-QGLKTATYPYWANETKSLDLNGFLNAIQKA- 173 (412)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHT-TTCCEEEEECEETTTTEECHHHHHHHHHHS-
T ss_pred cceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHH-cCceEEEEeeecCCCCccCHHHHHHHHHhC-
Confidence 899999 999999999883 34456999999999999999999885 899999999822235789999999998752
Q ss_pred hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC--CCcccHHHHHhhhcCCCCC---cE
Q 046900 196 SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS--SEFVSIAEILEARQYKDSE---RV 270 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~--~~~~s~~~~~~~~~~~~~~---~v 270 (442)
...+.++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++ ..+.++..+... .+ ++
T Consensus 174 --~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 246 (412)
T 1yaa_A 174 --PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEK-----LSTVSPV 246 (412)
T ss_dssp --CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHH-----TTTTCCE
T ss_pred --CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhc-----CCCCcce
Confidence 1123455559999999999999999999999999999999999999988764 123344444432 24 89
Q ss_pred EEEecCcccCCCCCceeEEEe--e----cCHH----HHHHHHH-ccc-cCCCcHHHHHHHHHHhcCchhH---HHHHHHH
Q 046900 271 HIVYSLSKDLGLPGFRVGTIY--S----YNDK----VVTTARR-MSS-FTLISSQTQYLLASMLSNKKFT---ENYIKTN 335 (442)
Q Consensus 271 i~~~S~SK~~g~~G~RiG~i~--~----~~~~----~~~~~~~-~~~-~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~ 335 (442)
++++||||.+|++|+|+||++ + .++. +.+.+.. ... ....+++.|.++.+++++..+. .+++++.
T Consensus 247 i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 326 (412)
T 1yaa_A 247 FVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTM 326 (412)
T ss_dssp EEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred EEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999997799999998 6 1444 5555554 222 2345789999999999876421 4578889
Q ss_pred HHHHHHHHHHHHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEE
Q 046900 336 RERLQKRYQMIIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWF 411 (442)
Q Consensus 336 ~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~i 411 (442)
++.++++++++.+.|++.+ +++..+++|+|+|+.++ ...+ ..+++++||.+.| ++
T Consensus 327 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~l~~~gi~v~~----------~~ 385 (412)
T 1yaa_A 327 SSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT----------PQMV-KRLEETHAVYLVA----------SG 385 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC----------HHHH-HHHHHHHCEECCT----------TS
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCC----------HHHH-HHHHHhCCEEecc----------Cc
Confidence 9999999999999998876 88888899999998653 2334 5666555999987 37
Q ss_pred EEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 412 RVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 412 Rls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
||+++..+++++++++++|+++++.
T Consensus 386 Ris~~~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 386 RASIAGLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp EEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred EEEEccCCHhHHHHHHHHHHHHHHh
Confidence 9999855889999999999998764
No 69
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=1.1e-42 Score=344.22 Aligned_cols=349 Identities=16% Similarity=0.204 Sum_probs=272.8
Q ss_pred CCceeeeecccc------cccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 47 PSGVIQMGLAEN------QVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 47 ~~~~i~l~~~~n------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
..++|||+.+.+ +.+.+.+.+.+.+..... .....|++..|..+||+++++++...++ ..+++
T Consensus 29 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~---------~~~~~y~~~~g~~~lr~~la~~~~~~~~--~~~~~ 97 (412)
T 1ajs_A 29 DPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNS---------SLNHEYLPILGLAEFRTCASRLALGDDS--PALQE 97 (412)
T ss_dssp CTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCT---------TCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHT
T ss_pred CCCceeeccceecCCCCCccccHHHHHHHHHhhhCh---------hhccCCCCCCCCHHHHHHHHHHHhcCCC--CccCC
Confidence 356899999873 233466666655432100 1235687788999999999999964433 33478
Q ss_pred CcEEE--ecChHHHHHHHHH--hhcCCC-----CeEEEcCCCCcChHHhHhhhcCcE-EEEEecCCCCCCcCCHHHHHHH
Q 046900 121 NRIVV--TAGATAANELLTF--ILADPG-----DALLVPTPYYPGFDRDLRWRTGIK-IVPIHCDSSNNFQITPQALEAA 190 (442)
Q Consensus 121 ~~i~~--t~G~~~ai~~~~~--~l~~~g-----d~Vl~~~p~y~~~~~~~~~~~G~~-v~~v~~~~~~~~~~d~~~l~~~ 190 (442)
++|++ |+|+++++.++++ .++++| |.|+++.|+|+.+...+.. .|++ ++.++++++++|.+|++.|++.
T Consensus 98 ~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~d~~~l~~~ 176 (412)
T 1ajs_A 98 KRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTT-AGFKDIRSYRYWDTEKRGLDLQGFLSD 176 (412)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHH-TTCSCEEEEECEETTTTEECHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHH-cCCceeEEEeeecCCCCccCHHHHHHH
Confidence 99999 9999999999964 456799 9999999999999998885 8999 9999986445688999999999
Q ss_pred HHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC--CCcccHHHHHhhhcCCCCC
Q 046900 191 YKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS--SEFVSIAEILEARQYKDSE 268 (442)
Q Consensus 191 l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~--~~~~s~~~~~~~~~~~~~~ 268 (442)
+.+. +.+++++++++|+||||.+++.+++++|+++|++||++||+||+|.++.+++ ..+.++..+... .+
T Consensus 177 l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~-----~~ 248 (412)
T 1ajs_A 177 LENA---PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSE-----GF 248 (412)
T ss_dssp HHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT-----TC
T ss_pred HHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhcc-----CC
Confidence 8752 2356778889999999999999999999999999999999999999988764 123355545432 47
Q ss_pred cEEEEecCcccCCCCCceeEEEee--cCHH----HHHHHHH-cccc-CCCcHHHHHHHHHHhcCchhH---HHHHHHHHH
Q 046900 269 RVHIVYSLSKDLGLPGFRVGTIYS--YNDK----VVTTARR-MSSF-TLISSQTQYLLASMLSNKKFT---ENYIKTNRE 337 (442)
Q Consensus 269 ~vi~~~S~SK~~g~~G~RiG~i~~--~~~~----~~~~~~~-~~~~-~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~ 337 (442)
+++++.||||.+|++|+|+||+++ +++. +...+.. .... ...+++.|.++.++|++..+. .+++++.++
T Consensus 249 ~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 328 (412)
T 1ajs_A 249 ELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMAD 328 (412)
T ss_dssp CEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHH
Confidence 899999999999988999999998 2343 3333443 2223 335889999999999876421 456788899
Q ss_pred HHHHHHHHHHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEE
Q 046900 338 RLQKRYQMIIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRV 413 (442)
Q Consensus 338 ~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRl 413 (442)
.++++++++.+.|++.+ +++..+.+|+|+|++++ .+++..+++++||.+.|| +||
T Consensus 329 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gv~v~~~----------~Ri 387 (412)
T 1ajs_A 329 RILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN-----------PKQVEYLINQKHIYLLPS----------GRI 387 (412)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC-----------HHHHHHHHHTTCEECCTT----------SEE
T ss_pred HHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC-----------HHHHHHHHHhCCEEecCC----------cEE
Confidence 99999999999999876 77778899999998664 134556666679999873 599
Q ss_pred EeecCCHHHHHHHHHHHHHHHHH
Q 046900 414 CFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 414 s~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
+++..+++++++++++|++++++
T Consensus 388 s~~~~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 388 NMCGLTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp EGGGCCTTTHHHHHHHHHHHHHH
T ss_pred EeeeCCHHHHHHHHHHHHHHHHh
Confidence 99955889999999999999865
No 70
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=2.3e-42 Score=345.31 Aligned_cols=393 Identities=19% Similarity=0.253 Sum_probs=289.7
Q ss_pred ccchhhhhcccCCCCcchhhhhhhhcCCCCCCCCCCcee-eeecccccccH---HHHHHHHHhCCCCcccCCCCC-C--C
Q 046900 13 GLSKVAVSETHGEDSPYFAGWKAYDENPYEESTNPSGVI-QMGLAENQVSF---DLLEEYLEQQPEASTWGKGAP-G--F 85 (442)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~l~~~~n~~~~---~~~~~~~~~~~~~~~~~~~~~-~--~ 85 (442)
.+|+++.+... .+....-+....+. .+.+++| +|+.+.+..++ +.+.+.+.+...... +|.. . .
T Consensus 3 ~~s~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 73 (444)
T 3if2_A 3 KFSKFGQKFTQ--PTGISQLMDDLGDA-----LKSDQPVNMLGGGNPAKIDAVNELFLETYKALGNDND--TGKANSSAI 73 (444)
T ss_dssp CCCHHHHHHHS--CCHHHHHHHHHHHH-----HHSSSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSC--TTCCCCHHH
T ss_pred CcchhhhhccC--chhHHHHHHHHHhh-----hcCchhhhccCCCCCCcccchHHHHHHHHHHHHhccc--cccccchhh
Confidence 46788877753 23333222222111 1125789 99999877654 334444443221100 0000 0 0
Q ss_pred CcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCC--------------eEEEc-
Q 046900 86 RENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGD--------------ALLVP- 150 (442)
Q Consensus 86 ~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd--------------~Vl~~- 150 (442)
.....|++..|.++||+++|+|+.+.+| +.+++++|++|+|+++++.+++.+++++|| .|+++
T Consensus 74 ~~~~~y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~ 151 (444)
T 3if2_A 74 ISMANYSNPQGDSAFIDALVGFFNRHYD--WNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPL 151 (444)
T ss_dssp HHHHSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESS
T ss_pred hhhhccCCCCCCHHHHHHHHHHHHhhcC--CCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeC
Confidence 1135699889999999999999998877 557899999999999999999999999998 78876
Q ss_pred CCCCcChHHh------HhhhcCcEEEEEecCCCC---CCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHH
Q 046900 151 TPYYPGFDRD------LRWRTGIKIVPIHCDSSN---NFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSV 221 (442)
Q Consensus 151 ~p~y~~~~~~------~~~~~G~~v~~v~~~~~~---~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~ 221 (442)
.|+|+.+... +. ..|..++.++.++++ +|.+|++.|++++++. ..++++|++++|+||||.+++.++
T Consensus 152 ~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~ 227 (444)
T 3if2_A 152 TPEYIGYSDVHVEGQHFA-AVLPHIDEVTHDGEEGFFKYRVDFEALENLPALK---EGRIGAICCSRPTNPTGNVLTDEE 227 (444)
T ss_dssp SSCCGGGTTCCSSSCCEE-ECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHH---TTCEEEEEEESSCTTTCCCCCHHH
T ss_pred CCCccchhhcccccchhh-ccCceEEecccccccCccccCCCHHHHHHHHHhc---CCCceEEEeCCCCCCCCCcCCHHH
Confidence 9999998763 33 368899999887532 3779999999885431 237899999999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHH
Q 046900 222 LEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTA 301 (442)
Q Consensus 222 l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~ 301 (442)
+++|+++|++||++||+||+|+.+.. +..+... .. ...+++++++||||. +++|+|+||+++ ++.+.+.+
T Consensus 228 l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~~---~~----~~~~~~i~~~S~sK~-~~~G~r~G~~~~-~~~l~~~~ 297 (444)
T 3if2_A 228 MAHLAEIAKRYDIPLIIDNAYGMPFP-NIIYSDA---HL----NWDNNTILCFSLSKI-GLPGMRTGIIVA-DAKVIEAV 297 (444)
T ss_dssp HHHHHHHHHHTTCCEEEECTTCTTTT-CCBCSCC---CC----CCCTTEEEEEESTTT-TCGGGCCEEEEC-CHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEECCCCCccc-ccccccc---cc----cCCCCEEEEechhhc-cCCCCceEEEEE-CHHHHHHH
Confidence 99999999999999999999986321 1111110 00 124789999999997 679999999998 56666666
Q ss_pred HHccc--cCCCcHHHHHHHHHHhcCchhHHHHHHH-HHHHHHHHHHHHHHHHHhC----CCeeecCCceEEEEEecCC-c
Q 046900 302 RRMSS--FTLISSQTQYLLASMLSNKKFTENYIKT-NRERLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSP-L 373 (442)
Q Consensus 302 ~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~-~ 373 (442)
..... .+..+++.|.++..++....+ .++..+ .++.++++++.+.+.|.+. ++.+..+.+|+|+|++++. .
T Consensus 298 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~ 376 (444)
T 3if2_A 298 SAMNAVVNLAPTRFGAAIATPLVANDRI-KQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLP 376 (444)
T ss_dssp HHHHHHHHSSCCCHHHHHHHHHHHTSHH-HHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCS
T ss_pred HHHHHhccCCCChHHHHHHHHHHHcCch-hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCC
Confidence 54433 256788999999999998776 344444 7788899999998888763 5677788999999999986 2
Q ss_pred ccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCC--------CCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 374 LEEQTREGELALWDSMLHEVKLNISPGSSCHCSE--------PGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 374 ~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~--------~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
. +..+++..|.++ ||.+.||+.|.... .+++||+++. +++++++++++|++++++..+
T Consensus 377 ~------~~~~l~~~l~~~-gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 377 I------STLDLYERLKAK-GTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp S------CHHHHHHHHHHT-TEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHHHHT
T ss_pred C------CHHHHHHHHHHC-CeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHHHc
Confidence 2 266788888555 99999999986431 2689999998 999999999999999988754
No 71
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=4e-42 Score=330.76 Aligned_cols=322 Identities=15% Similarity=0.252 Sum_probs=255.2
Q ss_pred CCCCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcE
Q 046900 45 TNPSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRI 123 (442)
Q Consensus 45 ~~~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i 123 (442)
.++.++|+|+.++|++++ +.+.+.+.+... ....|++ .|..+||+++|++++ +++++|
T Consensus 13 ~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~------------~~~~y~~-~~~~~lr~~la~~~~--------~~~~~i 71 (337)
T 3p1t_A 13 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAA------------RINRYPF-DAEPRVMRKLAEHFS--------CPEDNL 71 (337)
T ss_dssp -CCCCCEECSSCCCCSCCCHHHHHHHHHHGG------------GTTSCCT-THHHHHHHHHHHHHT--------SCGGGE
T ss_pred cCCCCceEeeCCCCCCCCCHHHHHHHHHhhh------------hhccCCC-CchHHHHHHHHHHhC--------cCHHHE
Confidence 446678999999998853 666666665431 2456854 589999999999985 678899
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
++|+|+++++.+++.++ +||.|+++.|+|..+...++. .|++++.+++++ +|.+|++.+++. .++++
T Consensus 72 ~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~~--------~~~~~ 138 (337)
T 3p1t_A 72 MLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAV-SGLRHFEIGLTD--DLLLDPNDLAQV--------SRDDC 138 (337)
T ss_dssp EEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHHHHTT-SCCEEEEECBCT--TSSBCHHHHTTC--------CTTEE
T ss_pred EEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHHHHHH-cCCEEEEecCCC--CCCCCHHHHHhh--------cCCCE
Confidence 99999999999999988 999999999999999999884 899999999875 477999998865 26789
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
+++++|+||||.+++.+++.+|+ +++++ +|+||+|+++.+.+.... ...+++++++|+||.+|++
T Consensus 139 v~i~~p~nptG~~~~~~~l~~l~---~~~~~-~ivDea~~~~~~~~~~~~-----------~~~~~~i~~~S~sK~~g~~ 203 (337)
T 3p1t_A 139 VVLANPSNPTGQALSAGELDQLR---QRAGK-LLIDETYVDYSSFRARGL-----------AYGENELVFRSFSKSYGLA 203 (337)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHH---HHCSE-EEEECTTGGGSSCSSSCC-----------CCBTTEEEEEESSSTTCCT
T ss_pred EEEeCCCCCCCCCCCHHHHHHHH---HhCCc-EEEECCChhhcccccccc-----------ccCCCEEEEeeCchhccCc
Confidence 99999999999999977766665 46676 566999998665432111 1136789999999999999
Q ss_pred CceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 284 GFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
|+|+||+++ ++.+.+.+++....+..+++.|.++..+++..++ ..+.++++.++++.+.+.|++.|+++.+++++
T Consensus 204 G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 278 (337)
T 3p1t_A 204 GLRLGALFG-PSELIAAMKRKQWFCNVGTLDLHALEAALDNDRA----REAHIAKTLAQRRRVADALRGLGYRVASSEAN 278 (337)
T ss_dssp TTCCEEEEC-CHHHHHHHHTTSCTTCSCHHHHHHHHHHHTCHHH----HHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSS
T ss_pred chheEEEEe-CHHHHHHHHhhcCCCCCCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHHCcCEECCCCCe
Confidence 999999999 5667777777666777889999999999987543 34455566777899999999989988877776
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
|+|+..+. ..++.+.|.+ +||.+.||+.|+. ++++||+++. +++++++++.|+++.+
T Consensus 279 -~~~~~~~~---------~~~~~~~l~~-~gi~v~~g~~~~~--~~~iRis~~~--~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 279 -FVLVENAA---------GERTLRFLRE-RGIQVKDAGQFGL--HHHIRISIGR--EEDNDRLLAALAEYSD 335 (337)
T ss_dssp -EEEEECTT---------THHHHHHHHH-TTEECEEGGGGTC--CSEEEEECCC--HHHHHHHHHHHHHHTC
T ss_pred -EEEEEcCC---------HHHHHHHHHH-CCeEEEECccCCC--CCeEEEecCC--HHHHHHHHHHHHHHhh
Confidence 66666654 2345555544 5999999999864 6799999984 7889999999988753
No 72
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=1.1e-44 Score=359.51 Aligned_cols=355 Identities=13% Similarity=0.158 Sum_probs=274.2
Q ss_pred cccCCCCcchhhhhhhh------cC-----CCCCCCCCCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcc
Q 046900 21 ETHGEDSPYFAGWKAYD------EN-----PYEESTNPSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFREN 88 (442)
Q Consensus 21 ~~~~~~~~~~~~~~~~~------~~-----~~~~~~~~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (442)
..||+ +++.+| .+. .+ ++.+..++.++|+|+.+++.++. +.+.+.+.+..... + ...
T Consensus 21 ~~~g~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~----~----~~~ 89 (427)
T 2hox_A 21 SEHGR--AFLDGI-ISEGSPKCECNTCYTGPDCSEKIQGCSADVASGDGLFLEEYWKQHKEASAVLVS----P----WHR 89 (427)
T ss_dssp GGGEE--CCTTSC-EETTEECCEECTTEESTTSCEECTTCCEECCSCCCGGGHHHHTTSHHHHCEEEC----T----TTT
T ss_pred CcCCc--eeeccc-cccCCcccccccccCCCCCcccCCCceEEecCcCCCCCCCHHHHHhHHhhhhcC----C----ccc
Confidence 45666 677788 555 33 56777788899999999998764 34444444332100 0 012
Q ss_pred cccCCCc-c---hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh--------cCCCCeEEEcCCCCcC
Q 046900 89 ALFQDYH-G---LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL--------ADPGDALLVPTPYYPG 156 (442)
Q Consensus 89 ~~Y~~~~-g---~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l--------~~~gd~Vl~~~p~y~~ 156 (442)
..|++.. | .++||++||+|+++..+ ..+++++|++|+|+++++.+++.+| +++||.|++++|+|+.
T Consensus 90 ~~Y~~~~~G~~~~~~lr~aia~~~~~~~~--~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~ 167 (427)
T 2hox_A 90 MSYFFNPVSNFISFELEKTIKELHEVVGN--AAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPV 167 (427)
T ss_dssp CSSSCSSCCTTCCHHHHHHHHHHHHHHTC--BCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHH
T ss_pred ccCCCCCCCccchHHHHHHHHHHHHHhCC--cCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCccc
Confidence 3498888 8 89999999999997643 4468899999999999999999999 8999999999999999
Q ss_pred hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE
Q 046900 157 FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL 236 (442)
Q Consensus 157 ~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v 236 (442)
+...++. .|++++.+ .+|++.|++.+++ ++++|+++|||||||.+++ +.+ + ++.+
T Consensus 168 ~~~~~~~-~g~~~~~~--------~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~-~~l-------~--~~~~ 222 (427)
T 2hox_A 168 FREQTKY-FDKKGYVW--------AGNAANYVNVSNP------EQYIEMVTSPNNPEGLLRH-AVI-------K--GCKS 222 (427)
T ss_dssp HHHHHHH-SCBTTEEE--------EEEGGGGTTCSCG------GGEEEEEESSCTTTCCCCC-CSS-------T--TCEE
T ss_pred HHHHHHH-cCCeeeee--------cCCHHHHHHhhcC------CceEEEEcCCCCCcccccH-HHH-------c--CCCE
Confidence 9999985 89887643 3677888876653 6789999999999999999 422 2 4567
Q ss_pred EEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHH
Q 046900 237 VSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQT 314 (442)
Q Consensus 237 i~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~ 314 (442)
|.|++|.+ . +.++..+. .+++|+++||||.+|++|+|+||++++++.+.+.+.+.... +.++.++
T Consensus 223 i~d~~~~~----~--~~s~~~~~-------~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 289 (427)
T 2hox_A 223 IYDMVYYW----P--HYTPIKYK-------ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRET 289 (427)
T ss_dssp EEECTTCS----T--TTSCCCSC-------BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHH
T ss_pred EEeecccC----C--CCCccccC-------CCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHHhcCCCCCHHH
Confidence 77777642 1 22222221 37899999999999999999999999667777777665443 5688999
Q ss_pred HHHHHHHhcCc-hh-------HHHHHHHHHHHHHHHHHHHHHHHHhC-CCee--------------ecCCceEEEEEecC
Q 046900 315 QYLLASMLSNK-KF-------TENYIKTNRERLQKRYQMIIEGLRSA-GIEC--------------LKGNAGLFCWMNLS 371 (442)
Q Consensus 315 q~~~~~~l~~~-~~-------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--------------~~~~~g~~~~~~~~ 371 (442)
|.++..+|++. ++ .++++++.++.++++++++.+.|++. |+.+ ..|++|+|+|++++
T Consensus 290 q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~ 369 (427)
T 2hox_A 290 QLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCE 369 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEEC
T ss_pred HHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECC
Confidence 99999988863 21 14567888999999999999999886 5543 35677999999997
Q ss_pred CcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 372 PLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 372 ~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
. ++.+++..+++++||.++||+.|+. .++++|||++. +++++++++++|++++++
T Consensus 370 ~--------~~~~~~~~ll~~~gI~v~pg~~f~~-~~~~~Ris~~~-~~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 370 W--------EEDKDCYQTFQNGRINTQNGVGFEA-SSRYVRLSLIK-TQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp S--------GGGCSHHHHHHHTTEECEEGGGGTS-CTTEEEEECSS-CHHHHHHHHHHHHHHHTC
T ss_pred C--------cHHHHHHHHHHHCCEEEcCCCccCC-CCCEEEEEecC-CHHHHHHHHHHHHHHHhh
Confidence 5 1345777887666999999999975 57899999998 899999999999998754
No 73
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=4.7e-43 Score=344.94 Aligned_cols=345 Identities=17% Similarity=0.216 Sum_probs=264.2
Q ss_pred Cceeeeeccc---cc---ccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 48 SGVIQMGLAE---NQ---VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 48 ~~~i~l~~~~---n~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
.++|||+.+. +. .+++.+.+.+.+.... .....|++..|..+||+++++++....+ ..++++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~lr~~la~~~~~~~~--~~~~~~ 93 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLEN----------ETTKNYLGIDGIPEFGRCTQELLFGKGS--ALINDK 93 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHH----------CCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHTT
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCc----------ccccCCCCCCCCHHHHHHHHHHHhcCCC--Cccccc
Confidence 4679999987 21 2335555555443110 0134687888999999999999964322 224688
Q ss_pred cEEE--ecChHHHHHHHHHhh--cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVV--TAGATAANELLTFIL--ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~--t~G~~~ai~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
+|++ |+|+++++.++++++ +.+||.|+++.|+|+.+...++. .|++++.+++++++++.+|++.|++.+++.
T Consensus 94 ~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 169 (396)
T 2q7w_A 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNS-AGLEVREYAYYDAENHTLDFDALINSLNEA--- 169 (396)
T ss_dssp CEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHH-TTCEEEEEECEETTTTEECHHHHHHHHTTC---
T ss_pred cEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHH-cCCceEEEecccCCCCCcCHHHHHHHHHhC---
Confidence 9998 999999999998766 46999999999999999999885 899999999864456789999999988641
Q ss_pred CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC-CCcccHHHHHhhhcCCCCCcEEEEecC
Q 046900 198 DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS-SEFVSIAEILEARQYKDSERVHIVYSL 276 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~-~~~~s~~~~~~~~~~~~~~~vi~~~S~ 276 (442)
..+++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++ ..+.++..+... .+++++++||
T Consensus 170 ~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~s~ 244 (396)
T 2q7w_A 170 QAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM-----HKELIVASSY 244 (396)
T ss_dssp CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHH-----CSCEEEEEEC
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhc-----CCcEEEEEec
Confidence 1246778889999999999999999999999999999999999999988753 123355545443 4689999999
Q ss_pred cccCCCCCceeEEEee--cCH----HHHHHHHHc--cccCCCcHHHHHHHHHHhcCch---hHHHHHHHHHHHHHHHHHH
Q 046900 277 SKDLGLPGFRVGTIYS--YND----KVVTTARRM--SSFTLISSQTQYLLASMLSNKK---FTENYIKTNRERLQKRYQM 345 (442)
Q Consensus 277 SK~~g~~G~RiG~i~~--~~~----~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~ 345 (442)
||.+|++|+|+||+++ +++ .+...+... ..+...+++.|.++.+++++.. ...+++++.++.++++++.
T Consensus 245 sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 324 (396)
T 2q7w_A 245 SXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQL 324 (396)
T ss_dssp TTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHH
T ss_pred cccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 344 344444332 2233458899999999998751 1245778889999999999
Q ss_pred HHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHH
Q 046900 346 IIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQ 421 (442)
Q Consensus 346 l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e 421 (442)
+.+.|++.+ +++..|++|+|+|++++. +.+..+++++||.+.|| +||+++..+++
T Consensus 325 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gv~v~~~----------~Ris~~~~~~e 383 (396)
T 2q7w_A 325 FVNTLQEKGANRDFSFIIKQNGMFSFSGLTK-----------EQVLRLREEFGVYAVAS----------GRVNVAGMTPD 383 (396)
T ss_dssp HHHHHHHTTCCSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGGGCCTT
T ss_pred HHHHHHhcCCCCCcceecCCCceEEEecCCH-----------HHHHHHHHhcCeeecCC----------ceEEEeecCHH
Confidence 999999886 777788999999987642 23444455559999873 69999855889
Q ss_pred HHHHHHHHHHHHH
Q 046900 422 TLEVALKRIHNFM 434 (442)
Q Consensus 422 ~i~~~l~~l~~~l 434 (442)
++++++++|++++
T Consensus 384 ~i~~~~~~l~~~l 396 (396)
T 2q7w_A 384 NMAPLCEAIVAVL 396 (396)
T ss_dssp THHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999998763
No 74
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.4e-42 Score=333.27 Aligned_cols=326 Identities=20% Similarity=0.255 Sum_probs=262.1
Q ss_pred CceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 48 SGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
.++|||+.++|+++. +.+.+.+.+.. .....|++..+ .+||+++|++++ +++++|++|
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~------------~~~~~y~~~~~-~~lr~~la~~~~--------~~~~~i~~t 73 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENL------------NCIRHYPEPDA-GTLRQMLAKRNS--------VDNNAILVT 73 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTG------------GGGGSCCCTTC-HHHHHHHHHHTT--------CCGGGEEEE
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhH------------hHHhcCCCCcH-HHHHHHHHHHhC--------cCHHHEEEc
Confidence 678999999988753 55666655543 12457887777 899999999974 678999999
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEec-CCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC-DSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~-~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
+|+++++.+++.++. ||+|+++.|+|..+...++. .|++++.+++ ++.+++.+ + ++++|+
T Consensus 74 ~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~~----------~------~~~~v~ 134 (350)
T 3fkd_A 74 NGPTAAFYQIAQAFR--GSRSLIAIPSFAEYEDACRM-YEHEVCFYPSNEDIGEADF----------S------NMDFCW 134 (350)
T ss_dssp SHHHHHHHHHHHHTT--TCEEEEEESCCHHHHHHHHH-TTCEEEEEETTSCGGGSCC----------T------TCSEEE
T ss_pred CCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHHHHHH-cCCeEEEEecCCccccCcc----------C------CCCEEE
Confidence 999999999999997 99999999999999999885 9999999998 65444433 1 788999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.+++.+|++.|.++ +||+||+|+++.+++.... ..+. ..+++++++||||.+|++|+
T Consensus 135 i~~p~nptG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~~--~~~~------~~~~~i~~~S~sK~~~~~G~ 204 (350)
T 3fkd_A 135 LCNPNNPDGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIRP--ADIK------GRKNLVMVYSFSHAYGIPGL 204 (350)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCCG--GGGT------TCSSEEEEEESHHHHSCGGG
T ss_pred EeCCCCCcCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCcchhh--HHhh------cCCCEEEEecCchhccCcch
Confidence 999999999999999999999998765 9999999999887654321 1111 25889999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceE
Q 046900 286 RVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGL 364 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~ 364 (442)
|+||+++ ++.+.+.+......+.++++.|.++..++++.+. +.++.++.. ++++.+.+.|++. |+++.++.+ .
T Consensus 205 r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~-~ 278 (350)
T 3fkd_A 205 RIGYIVA-NKDFMKRVAAFSTPWAVNALAIEAAKFILIHPAQ---FTLPIRKWQ-RNTVDFITALNRLDGVEVHPSGT-T 278 (350)
T ss_dssp CCEEEEC-CHHHHHHHHTTCCTTCSCHHHHHHHHHHHHCTTT---TCCCHHHHH-HHHHHHHHHHHHSTTEEECCCSS-S
T ss_pred heEeEEe-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCHHH---HHHHHHHHH-HHHHHHHHHHhcCCCcEECCCCC-c
Confidence 9999999 7788888887777788899999999999987651 122333333 7888999999887 888866555 4
Q ss_pred EEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 365 FCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
|+|+.++.. +..++++.|++++||.+.||+.|+...++++||+++. +++++++++.|++++++..
T Consensus 279 ~~~~~~~~~-------~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~~~~~~ 343 (350)
T 3fkd_A 279 FFLLRLKKG-------TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQR--PAQNQLFIKALETFLEKYE 343 (350)
T ss_dssp EEEEEESSS-------CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECCC--HHHHHHHHHHHHHHHTC--
T ss_pred EEEEECCCC-------CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcCC--HHHHHHHHHHHHHHHHHhc
Confidence 778888753 2678899998846999999999987667899999984 7778999999988877654
No 75
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=4e-42 Score=343.77 Aligned_cols=345 Identities=17% Similarity=0.245 Sum_probs=268.2
Q ss_pred ceeeeecccc-cc-----cHHHHHHHHHhCC--CCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCc---
Q 046900 49 GVIQMGLAEN-QV-----SFDLLEEYLEQQP--EASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAK--- 117 (442)
Q Consensus 49 ~~i~l~~~~n-~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~--- 117 (442)
.+|||+++.. .. ..+.+.+...... .. .....|.+..|.+++|+++++++. + ..
T Consensus 50 ~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~----------~~~~~Y~~~~G~~~lr~~ia~~l~---g--~~~~~ 114 (448)
T 3meb_A 50 KKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLS----------KYNKEYPPVAGFPLFLEAAQFLMF---G--KDSKA 114 (448)
T ss_dssp TCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTT----------TTCCSCCCTTCCHHHHHHHHHHHH---C--TTCHH
T ss_pred CeEEeecccccCCCCCEechHHHHHHHHHHhhccc----------CCCCCCCCCcchHHHHHHHHHHhc---C--CCccc
Confidence 4689998764 21 2355555532221 00 124578888899999999999983 2 22
Q ss_pred cCCCcEEE--ecChHHHHHH--HHHhhcCCCCeEEEcCCCCcChHHhHh----hhcCcEEEEEecCCCC-CCcCCHHHHH
Q 046900 118 FDLNRIVV--TAGATAANEL--LTFILADPGDALLVPTPYYPGFDRDLR----WRTGIKIVPIHCDSSN-NFQITPQALE 188 (442)
Q Consensus 118 ~~~~~i~~--t~G~~~ai~~--~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~~G~~v~~v~~~~~~-~~~~d~~~l~ 188 (442)
+++++|++ |+|+++++.+ .+.+++.+||+|++++|+|+.+...++ . .|++++.+|+.+++ +|.+|++.++
T Consensus 115 ~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~-~G~~v~~~~~~~~~~~~~~d~e~l~ 193 (448)
T 3meb_A 115 AQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNK-LKVPYKEYTYLRKDGELEIDFSNTK 193 (448)
T ss_dssp HHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCT-TTSCCEEECCBCTTSCSSBCHHHHH
T ss_pred cCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHh-CCCeEEEEeccccccCCCcCHHHHH
Confidence 23689999 9999999988 455677899999999999999998888 6 89999999984444 6889999999
Q ss_pred HHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC--CcccHHHHHhhhcCCC
Q 046900 189 AAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS--EFVSIAEILEARQYKD 266 (442)
Q Consensus 189 ~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~--~~~s~~~~~~~~~~~~ 266 (442)
+.+++. ..+++++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++. ...++..+...
T Consensus 194 ~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~----- 265 (448)
T 3meb_A 194 KDIQSA---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDA----- 265 (448)
T ss_dssp HHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHT-----
T ss_pred HHHHhC---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhc-----
Confidence 999752 12567888899999999999999999999999999999999999999887641 12344444332
Q ss_pred CCcEEEEecCcccCCCCCceeEEE--ee--------cCH----HHHHHHHHc--cccCCCcHHHHHHHHHHhcCchhHH-
Q 046900 267 SERVHIVYSLSKDLGLPGFRVGTI--YS--------YND----KVVTTARRM--SSFTLISSQTQYLLASMLSNKKFTE- 329 (442)
Q Consensus 267 ~~~vi~~~S~SK~~g~~G~RiG~i--~~--------~~~----~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~- 329 (442)
..++++++||||.||++|+|+||+ ++ +++ .+...+... ......+.+.|.++..++.+.++..
T Consensus 266 ~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~ 345 (448)
T 3meb_A 266 GVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQM 345 (448)
T ss_dssp TCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHH
T ss_pred CCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHH
Confidence 478999999999999999999998 66 444 444444432 2234567899999999999865332
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHhC---C------CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEe
Q 046900 330 --NYIKTNRERLQKRYQMIIEGLRSA---G------IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNIS 398 (442)
Q Consensus 330 --~~~~~~~~~~~~~~~~l~~~L~~~---g------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~ 398 (442)
+++++++++++++|+.+.+.|++. + +.+..+++|+|+|+.++ .+++..+++++||.+.
T Consensus 346 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~ll~~~gV~v~ 414 (448)
T 3meb_A 346 FYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT-----------PEHVDYLKEKWSIYLV 414 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC-----------HHHHHHHHHHHCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC-----------HHHHHHHHHhCCEEEe
Confidence 447888999999999999999987 3 55667899999998774 2556677777799999
Q ss_pred CCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 399 PGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 399 pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
||+ + |||++.++++++++++++|+++++++
T Consensus 415 ~G~-------g--Ris~a~~~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 415 KAG-------G--RMSMCGLTESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp SGG-------G--EEEGGGCCTTTHHHHHHHHHHHHHHS
T ss_pred CCC-------c--EEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 975 2 99998767888999999999998743
No 76
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=3.7e-43 Score=345.09 Aligned_cols=334 Identities=18% Similarity=0.238 Sum_probs=249.9
Q ss_pred CCCceeeeecccccccHH-HHHHHHHhCCCCcccCCCCCCCCcccccCCCcch-----HHHHHHHHHHHHHHhCCCCccC
Q 046900 46 NPSGVIQMGLAENQVSFD-LLEEYLEQQPEASTWGKGAPGFRENALFQDYHGL-----KSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~-----~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+..++|+|+.+++.++.+ .+.+.+.+... . .......+|++..|. ++||+++|+|++. +| +.++
T Consensus 20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~---~----~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~-~g--~~~~ 89 (391)
T 3bwn_A 20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTVT---I----RGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGV-VG--NAAT 89 (391)
T ss_dssp TTTSCEECSSCCCGGGHHHHHHTGGGSCEE---E----CTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHH-HC--SBCC
T ss_pred CCCCeeEcCCCCCCCCCCHHHHHhHHHHhh---c----CccchhhcCCCCCCcccccCHHHHHHHHHHHHh-cC--CCCC
Confidence 456789999998876543 22222211110 0 000134679999998 9999999999984 44 5566
Q ss_pred C-CcEEEecChHHHHHHHHHhhcCCCC----eEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHH
Q 046900 120 L-NRIVVTAGATAANELLTFILADPGD----ALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEA 194 (442)
Q Consensus 120 ~-~~i~~t~G~~~ai~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~ 194 (442)
+ ++|++|+|+++++.+++.+|+++|| .|++++|+|+.|...++. .|++++.++++.++ ++ .
T Consensus 90 ~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~-~g~~~~~~~~d~~~---l~--------~-- 155 (391)
T 3bwn_A 90 EDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTY-VRSGMYKWEGDAWG---FD--------K-- 155 (391)
T ss_dssp SSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHT-TCBTTEEEEEESTT---CC--------C--
T ss_pred CCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHH-cCCeEEEecCCHHH---cC--------C--
Confidence 6 5999999999999999999999999 999999999999999985 89999999887532 22 0
Q ss_pred HhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEe
Q 046900 195 ESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVY 274 (442)
Q Consensus 195 ~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~ 274 (442)
.++++|++++||||||.+++ +|++.+..++++||+||+|.+ + .+.++.. ..+++++++
T Consensus 156 ----~~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~--------~~~~~i~~~ 213 (391)
T 3bwn_A 156 ----KGPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR--------RQDHDIMLF 213 (391)
T ss_dssp ----CSCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--------CBCCSEEEE
T ss_pred ----CCCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--------CCCCeEEEE
Confidence 27889999999999999997 344422223399999999973 1 1112111 147899999
Q ss_pred cCcccCCCCCceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCch-h------HHHHHHHHHHHHHHHHHH
Q 046900 275 SLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKK-F------TENYIKTNRERLQKRYQM 345 (442)
Q Consensus 275 S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~-~------~~~~~~~~~~~~~~~~~~ 345 (442)
||||.||++|+|+||++++++.+.+.+..... .+.++++.|.++..++++.. | .+++++++++.++++++.
T Consensus 214 S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (391)
T 3bwn_A 214 TFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEK 293 (391)
T ss_dssp EHHHHHSCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHH
T ss_pred echhhcCCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999755677776665444 36788999999999998642 1 145788899999999999
Q ss_pred HHHHHHhC-CCeeecC-------------CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEE
Q 046900 346 IIEGLRSA-GIECLKG-------------NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWF 411 (442)
Q Consensus 346 l~~~L~~~-g~~~~~~-------------~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~i 411 (442)
+.+.|++. |+++..| ++|+|+|++++.. +.+..+++++||.+.||+.|+. .++++
T Consensus 294 l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~----------~~~~~~l~~~gV~v~pg~~fg~-~~~~i 362 (391)
T 3bwn_A 294 LREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE----------TDLVSELRRHKVMSRAGERCGS-DKKHV 362 (391)
T ss_dssp HHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSS----------CCHHHHHHHTTEECEEGGGGTC-CTTEE
T ss_pred HHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcH----------HHHHHHHHHCCEEEccCCCCCC-CCCEE
Confidence 99999987 5665443 4556999998741 1233445566999999999974 46899
Q ss_pred EEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 412 RVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 412 Rls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
|||++. +++++++++++|++++++.
T Consensus 363 Ris~~~-~~e~i~~~~~~L~~~~~~~ 387 (391)
T 3bwn_A 363 RVSMLS-REDVFNVFLERLANMKLIK 387 (391)
T ss_dssp EEESCS-CHHHHHHHHHHHHSCC---
T ss_pred EEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 999998 8999999999999987654
No 77
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=5.1e-41 Score=327.42 Aligned_cols=332 Identities=16% Similarity=0.217 Sum_probs=263.4
Q ss_pred eeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecCh
Q 046900 51 IQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGA 129 (442)
Q Consensus 51 i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~ 129 (442)
|||+.++|+++ ++.+.+.+.+...... .....|++..+ .++|+++++++++.+| .++++++|++|+|+
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~~~y~~~~~-~~l~~~la~~l~~~~g--~~~~~~~v~~~~G~ 101 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIA--------TELNRYPERDA-VELRDELAAYITKQTG--VAVTRDNLWAANGS 101 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHG--------GGTTSCCCTTC-HHHHHHHHHHHHHHHC--CCCCGGGEEEESHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhcc--------cccccCCCccH-HHHHHHHHHhhhhccc--CCCChHhEEECCCh
Confidence 89999998764 3444444443321100 01356877666 7999999999998876 44678999999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCC
Q 046900 130 TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNP 209 (442)
Q Consensus 130 ~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P 209 (442)
++++..++.+++++||.|+++.|+|+.+...++. .|++++.+|.++ +|.+|++.+++.+++. ++++|++++|
T Consensus 102 ~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~ 173 (369)
T 3cq5_A 102 NEILQQLLQAFGGPGRTALGFQPSYSMHPILAKG-THTEFIAVSRGA--DFRIDMDVALEEIRAK-----QPDIVFVTTP 173 (369)
T ss_dssp HHHHHHHHHHHCSTTCEEEEEESSCTHHHHHHHH-TTCEEEEEECCT--TSSCCHHHHHHHHHHH-----CCSEEEEESS
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHH-cCCEEEEecCCc--CCCCCHHHHHHHhhcc-----CCCEEEEeCC
Confidence 9999999999999999999999999999998884 899999999753 5779999999998752 6789999999
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCC-cEEEEecCcccCCCCCceeE
Q 046900 210 SNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSE-RVHIVYSLSKDLGLPGFRVG 288 (442)
Q Consensus 210 ~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~-~vi~~~S~SK~~g~~G~RiG 288 (442)
+||||.+++.+++.+|++.| ++++|+||+|+++.++ .+...+... .+ ++++++|+||.+|++|+|+|
T Consensus 174 ~nptG~~~~~~~l~~l~~~~---~~~li~De~~~~~~~~----~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G~r~G 241 (369)
T 3cq5_A 174 NNPTGDVTSLDDVERIINVA---PGIVIVDEAYAEFSPS----PSATTLLEK-----YPTKLVVSRTMSKAFDFAGGRLG 241 (369)
T ss_dssp CTTTCCCCCHHHHHHHHHHC---SSEEEEECTTGGGCCS----CCGGGGTTT-----CTTTEEEEEESSSTTSCGGGCCE
T ss_pred CCCCCCCCCHHHHHHHHHhC---CCEEEEECCchhhcCC----cchHHHHhh-----CCCCEEEEEechHhcCCcccceE
Confidence 99999999987777777755 5999999999987653 122222121 35 88999999999999999999
Q ss_pred EEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEE
Q 046900 289 TIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWM 368 (442)
Q Consensus 289 ~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~ 368 (442)
|++++ +.+.+.+......+..+++.|.++.++++.. +++++.++.++++++++.+.|++.|+++.++. |+|+|+
T Consensus 242 ~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~ 315 (369)
T 3cq5_A 242 YFVAN-PAFIDAVMLVRLPYHLSALSQAAAIVALRHS----ADTLGTVEKLSVERVRVAARLEELGYAVVPSE-SNFVFF 315 (369)
T ss_dssp EEEEC-THHHHHHHTTSCTTCSCHHHHHHHHHHHHTH----HHHHTHHHHHHHHHHHHHHHHHHHTCEEECCS-SSEEEE
T ss_pred EEEeC-HHHHHHHHHcCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHhCCCEECCCC-CeEEEE
Confidence 99995 5566666666666678999999999998864 35677888999999999999988888887554 558898
Q ss_pred ecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 369 NLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 369 ~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+++. +..++.+.|.++ ||.+.|| + .++++||+++ +++++++++++|+++++
T Consensus 316 ~~~~--------~~~~l~~~l~~~-gi~v~~~---~--~~~~iRis~~--~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 316 GDFS--------DQHAAWQAFLDR-GVLIRDV---G--IAGHLRTTIG--VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp ECCS--------SHHHHHHHHHHT-TEECBCC---S--CTTEEEEECC--CHHHHHHHHHHHHHHHT
T ss_pred ECCC--------CHHHHHHHHHHC-CEEEEEC---C--CCCeEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 8862 256788888655 9999998 1 2578999998 57889999999998764
No 78
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=2e-41 Score=332.88 Aligned_cols=346 Identities=16% Similarity=0.183 Sum_probs=254.2
Q ss_pred eeeeeccc------ccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcE
Q 046900 50 VIQMGLAE------NQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRI 123 (442)
Q Consensus 50 ~i~l~~~~------n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i 123 (442)
.|||+++. ++..++.++++.....+. .....|.+..|+++||+++++++... .........
T Consensus 46 kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~----------~~~~~Y~p~~G~p~lr~aia~~~~g~---~~~~~~~~~ 112 (420)
T 4h51_A 46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDM----------NLDYEYLPISGYQPFIDEAVKIIYGN---TVELENLVA 112 (420)
T ss_dssp CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHT----------TCCCCCCCTTCCHHHHHHHHHHHHC------CGGGEEE
T ss_pred CEEeecCcccCCCCCCCCCHHHHHHHHHHhcC----------CCCCCCCCcCChHHHHHHHHHHhcCC---Cccccccce
Confidence 58999983 222346676654433211 12346999999999999999987532 111122234
Q ss_pred EEecChHHHHHHHH----HhhcCCCCeEEEcCCCCcChHHhHhhhcCcE-EEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 124 VVTAGATAANELLT----FILADPGDALLVPTPYYPGFDRDLRWRTGIK-IVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 124 ~~t~G~~~ai~~~~----~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~-v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
+.|.|++.++...+ +.+.+|||.|++++|+|+.|...++. .|++ +..++..+++++.+|.+.+.+.+... .
T Consensus 113 ~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~-aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~---~ 188 (420)
T 4h51_A 113 VQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKA-AGWKNICTYAYYDPKTVSLNFEGMKKDILAA---P 188 (420)
T ss_dssp EEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHH-TTCCCEEEEECEEGGGTEECHHHHHHHHHHS---C
T ss_pred eeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHH-cCCeEEEeeccccccccCCCHHHHHHHHhcc---C
Confidence 55788887776554 44567999999999999999999995 8886 44455544556788999999888753 3
Q ss_pred CceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc--HHHHHhhhcCCCCCcEEEEecC
Q 046900 199 MRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS--IAEILEARQYKDSERVHIVYSL 276 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s--~~~~~~~~~~~~~~~vi~~~S~ 276 (442)
.+++++++++||||||.+++.+++++|+++|+++++++|+||+|.+|.+++....+ ....... ..+++++.||
T Consensus 189 ~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~s~ 263 (420)
T 4h51_A 189 DGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARR-----GIEVLLAQSF 263 (420)
T ss_dssp SSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT-----TCCCEEEEEC
T ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhh-----CceEEEEecc
Confidence 46677888899999999999999999999999999999999999999886532222 2222222 4789999999
Q ss_pred cccCCCCCceeEEEeecCHHHHHH------HHH--ccccCCCcHHHHHHHHHHhcCchhH---HHHHHHHHHHHHHHHHH
Q 046900 277 SKDLGLPGFRVGTIYSYNDKVVTT------ARR--MSSFTLISSQTQYLLASMLSNKKFT---ENYIKTNRERLQKRYQM 345 (442)
Q Consensus 277 SK~~g~~G~RiG~i~~~~~~~~~~------~~~--~~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~ 345 (442)
||.|+++|+|+||++++.+..... +.. .......+...|.++..++.++... +++++.++++++++|+.
T Consensus 264 SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~ 343 (420)
T 4h51_A 264 SKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRT 343 (420)
T ss_dssp TTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998855433222 111 1223556778899999999986543 34567789999999999
Q ss_pred HHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHH
Q 046900 346 IIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQ 421 (442)
Q Consensus 346 l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e 421 (442)
+.+.|++.| |.+..+++|||.|+.++. +.++.| +++||.+.||+ |||++.++++
T Consensus 344 l~~~L~~~g~~~~~~~i~~q~GmF~~~gls~-----------e~v~~L-~e~~Vy~~~~g----------Ris~Agl~~~ 401 (420)
T 4h51_A 344 VYDELLRLQTPGSWEHVINQIGMFSFLGLSK-----------AQCEYC-QNHNIFITVSG----------RANMAGLTHE 401 (420)
T ss_dssp HHHHHHHTTCSSCCTHHHHCCSSEEECCCCH-----------HHHHHH-HHTTEECCTTC----------EEEGGGCCHH
T ss_pred HHHHHHHhCCCCCCCeecCCCceEEecCcCH-----------HHHHHH-HhCCEEEcCCC----------EEEeccCCHH
Confidence 999999875 445678899999976642 234444 56699988742 9999988999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 046900 422 TLEVALKRIHNFMQKRER 439 (442)
Q Consensus 422 ~i~~~l~~l~~~l~~~~~ 439 (442)
.++.+.++|.+++++.++
T Consensus 402 ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 402 TALMLAQTINDAVRNVNR 419 (420)
T ss_dssp HHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999987654
No 79
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=8.6e-41 Score=324.71 Aligned_cols=330 Identities=17% Similarity=0.269 Sum_probs=260.0
Q ss_pred CCceeeeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
..++|+|+.++|+++. +.+.+.+.+..... + .....|++. +..++|+++|++++ +++++|++
T Consensus 25 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~----~~~~~y~~~-~~~~lr~~la~~~g--------~~~~~i~~ 87 (360)
T 3hdo_A 25 IASWIKLNTNENPYPPSPEVVKAILEELGPD----G----AALRIYPSA-SSQKLREVAGELYG--------FDPSWIIM 87 (360)
T ss_dssp CTTSEECSSCCCSSCCCHHHHHHHHHHHTTT----C----GGGGSCCCS-SCHHHHHHHHHHHT--------CCGGGEEE
T ss_pred ccceeeccCCCCCCCCCHHHHHHHHHHHhcc----c----chhhcCCCC-chHHHHHHHHHHhC--------cCcceEEE
Confidence 4578999999998853 55565555433210 0 114567665 56999999999985 67899999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.+++.+++++||.|+++.|+|..+...++. .|++++.++++++ +.+ +++++. .++++++
T Consensus 88 t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~v~~~~~--~~~--~~l~~~--------~~~~~v~ 154 (360)
T 3hdo_A 88 ANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEV-QGARVRTFGLTGD--FRI--AGFPER--------YEGKVFF 154 (360)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHH-HTCEEEEECBCTT--SSB--TTCCSS--------BCSSEEE
T ss_pred cCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHH-CCCEEEEeeCCCC--CCH--HHHHhh--------cCCCEEE
Confidence 99999999999999999999999999999999998885 8999999998653 444 444322 2467899
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.+++. ++|+++++++|+||+|+++. +....+. ... .+++++++|+||.+|++|+
T Consensus 155 i~~p~nptG~~~~~~~l~---~l~~~~~~~li~De~~~~~~--~~~~~~~---~~~-----~~~~i~~~s~sK~~g~~G~ 221 (360)
T 3hdo_A 155 LTTPNAPLGPSFPLEYID---ELARRCAGMLVLDETYAEFA--ESNALEL---VRR-----HENVVVTRTLSKSYSLAGM 221 (360)
T ss_dssp EESSCTTTCCCCCHHHHH---HHHHHBSSEEEEECTTGGGS--SCCCTHH---HHH-----CSSEEEEEESTTTTSCTTS
T ss_pred EeCCCCCCCCCcCHHHHH---HHHHHCCCEEEEECChHhhC--CcchhHH---hcc-----CCCEEEEecchHhhcCCcc
Confidence 999999999999976555 55568899999999999853 3323232 222 4789999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEE
Q 046900 286 RVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLF 365 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~ 365 (442)
|+||+++ ++.+.+.+......+..+++.|.++.+++++.+ ++++.++.++++++.+.+.|++.|+.+.++.+ .|
T Consensus 222 r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~ 295 (360)
T 3hdo_A 222 RIGLAIA-RPEVIAALDKIRDHYNLDRLAQAACVAALRDQA----YLSECCRRIRETREWFTTELRSIGYDVIPSQG-NY 295 (360)
T ss_dssp CCEEEEC-CHHHHHHHHHHSCSCCSCHHHHHHHHHHHHCHH----HHHHHHHHHHHHHHHHHHHHHHTTCEECCCSS-SE
T ss_pred ceeeEee-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHCCCEEcCCCc-cE
Confidence 9999999 677888887776777889999999999998643 57788899999999999999988888876655 57
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+|+.++.. +..++.+.|.++ ||.+.||..+ ..++++||+++ ++++++++++.|+++.+.+
T Consensus 296 ~~~~~~~~-------~~~~l~~~l~~~-gi~v~~~~~~--~~~~~iRis~~--~~~e~~~l~~al~~~~~~~ 355 (360)
T 3hdo_A 296 LFATPPDR-------DGKRVYDGLYAR-KVLVRHFSDP--LLAHGMRISIG--TREEMEQTLAALKEIGEGH 355 (360)
T ss_dssp EEEECTTC-------CHHHHHHHHHHT-TEECBCCCST--TTTTSEEEECC--CHHHHHHHHHHHHHHHC--
T ss_pred EEEECCCC-------CHHHHHHHHHHC-CEEEEECCCC--CCCCEEEEEcC--CHHHHHHHHHHHHHHhccc
Confidence 88887642 256788888665 9999998762 34589999998 4888999999999887654
No 80
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=7.1e-42 Score=336.35 Aligned_cols=341 Identities=14% Similarity=0.197 Sum_probs=262.1
Q ss_pred Cceeeeecccc----c--ccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 48 SGVIQMGLAEN----Q--VSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 48 ~~~i~l~~~~n----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
.++|||+.+.. . .+++.+.+.+.+.... .....|++..|..++|+++|+++.. ..++++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~lr~~la~~~~~-----~~~~~~ 90 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLET----------ETTKTYAGLSGEPEFQKAMGELILG-----DGLKSE 90 (394)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHH----------CCCCCCCCSSCCHHHHHHHHHHHHG-----GGCCGG
T ss_pred ccccccccceeeCCCCCccCcHHHHHHHHHhcCC----------cccCCCCCCCCcHHHHHHHHHHHhC-----CCCCcc
Confidence 46799999872 1 3346666655543210 0235688888999999999999852 123688
Q ss_pred cEEE--ecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVV--TAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~--t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
+|++ |+|+++++.+++.++.. +||.|+++.|+|+.+...++. .|++++.++++.++++.+|++.+++.+++.
T Consensus 91 ~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 166 (394)
T 2ay1_A 91 TTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNF-MGLPVQTYRYFDAETRGVDFEGMKADLAAA--- 166 (394)
T ss_dssp GEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHH-HTCCEEEEECEETTTTEECHHHHHHHHHTC---
T ss_pred cEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH-cCCceEEEecccccCCccCHHHHHHHHHhC---
Confidence 9999 99999999999987754 999999999999999998885 899999999864456789999999998741
Q ss_pred CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC-CcccHHHHHhhhcCCCCCcEEEEecC
Q 046900 198 DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS-EFVSIAEILEARQYKDSERVHIVYSL 276 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~S~ 276 (442)
..+++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++. ...++..+... .+++++++|+
T Consensus 167 ~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~s~ 241 (394)
T 2ay1_A 167 KKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASR-----IPEVLIAASC 241 (394)
T ss_dssp CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHH-----CSSEEEEEEC
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhc-----CCCEEEEEec
Confidence 12356777899999999999999999999999999999999999999877531 22344444432 3678999999
Q ss_pred cccCCCCCceeEEEee--cCHHHH----HHHHHc--cccCCCcHHHHHHHHHHhcCch---hHHHHHHHHHHHHHHHHHH
Q 046900 277 SKDLGLPGFRVGTIYS--YNDKVV----TTARRM--SSFTLISSQTQYLLASMLSNKK---FTENYIKTNRERLQKRYQM 345 (442)
Q Consensus 277 SK~~g~~G~RiG~i~~--~~~~~~----~~~~~~--~~~~~~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~ 345 (442)
||.+|++|+|+||+++ +++.+. ..+... ..+...+++.|.++.+++++.. ...++++++++.+++++++
T Consensus 242 sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T 2ay1_A 242 SKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQ 321 (394)
T ss_dssp TTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 444432 222221 2233458899999999998752 1245788889999999999
Q ss_pred HHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHH
Q 046900 346 IIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQ 421 (442)
Q Consensus 346 l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e 421 (442)
+.+.|++.+ +++..+.+|+|+|++++. ..+ ..+++++||.+.|| +||+++..+++
T Consensus 322 l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~-~~~l~~~gi~v~~~----------~Ris~~~~~~~ 380 (394)
T 2ay1_A 322 LAGELRDLSGSDRFGFVAEHRGMFSRLGATP----------EQV-KRIKEEFGIYMVGD----------SRINIAGLNDN 380 (394)
T ss_dssp HHHHHHHHHTSSTTTHHHHCCSSEEECCCCH----------HHH-HHHHHHHCEECCTT----------CEEEGGGCCTT
T ss_pred HHHHHHhcCCCCCeeEEcCCceEEEeeCCCH----------HHH-HHHHHhCCEEecCC----------CeEEeecCCHh
Confidence 999998764 777778889999987642 234 44444559999874 59999855889
Q ss_pred HHHHHHHHHHHH
Q 046900 422 TLEVALKRIHNF 433 (442)
Q Consensus 422 ~i~~~l~~l~~~ 433 (442)
++++++++|+++
T Consensus 381 ~i~~~~~~l~~~ 392 (394)
T 2ay1_A 381 TIPILARAIIEV 392 (394)
T ss_dssp THHHHHHHHHHH
T ss_pred hHHHHHHHHHHc
Confidence 999999999875
No 81
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=1.1e-40 Score=320.89 Aligned_cols=316 Identities=16% Similarity=0.271 Sum_probs=252.7
Q ss_pred CCceeeeeccccccc-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE
Q 046900 47 PSGVIQMGLAENQVS-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV 125 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 125 (442)
+.++|+|+.++++++ ++.+.+.+.+.... .....|++. +..++|+++|+++++. .+++++|++
T Consensus 18 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~-~~~~lr~~la~~~~~~-----~~~~~~v~~ 81 (335)
T 1uu1_A 18 KRDKTYLALNENPFPFPEDLVDEVFRRLNS----------DALRIYYDS-PDEELIEKILSYLDTD-----FLSKNNVSV 81 (335)
T ss_dssp CCCSEEESSCCCSSCCCHHHHHHHHHTCCG----------GGGGSCCCS-SCHHHHHHHHHHHTCS-----SCCGGGEEE
T ss_pred CCcceECCCCCCCCCCCHHHHHHHHHHhhh----------hhhhcCCCC-chHHHHHHHHHHcCCC-----CCCHHHEEE
Confidence 357899999998764 46666666655421 123568664 6899999999999742 256889999
Q ss_pred ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEE
Q 046900 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVL 205 (442)
Q Consensus 126 t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 205 (442)
|+|+++++.++++++ ||+|+++ |+|+.+...++. .|++++.+|+++ +|.+|+++| + ++++|+
T Consensus 82 ~~G~~~al~~~~~~~---gd~Vl~~-p~y~~~~~~~~~-~g~~~~~v~~~~--~~~~d~~~l-----~------~~~~v~ 143 (335)
T 1uu1_A 82 GNGADEIIYVMMLMF---DRSVFFP-PTYSCYRIFAKA-VGAKFLEVPLTK--DLRIPEVNV-----G------EGDVVF 143 (335)
T ss_dssp ESSHHHHHHHHHHHS---SEEEECS-SSCHHHHHHHHH-HTCEEEECCCCT--TSCCCCCCC-----C------TTEEEE
T ss_pred cCChHHHHHHHHHHh---CCcEEEC-CCcHHHHHHHHH-cCCeEEEeccCC--CCCCCHHHc-----C------CCCEEE
Confidence 999999999999988 8999999 999999988884 899999999864 467887776 1 678999
Q ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCc
Q 046900 206 ITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGF 285 (442)
Q Consensus 206 l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~ 285 (442)
+++|+||||.+++.+++++|+++| + ++|+||+|+++.+. .+.+ .... .+++++++|+||.+|++|+
T Consensus 144 l~~p~nptG~~~~~~~l~~l~~~~---~-~li~De~~~~~~~~--~~~~---~~~~-----~~~~i~~~s~sK~~g~~G~ 209 (335)
T 1uu1_A 144 IPNPNNPTGHVFEREEIERILKTG---A-FVALDEAYYEFHGE--SYVD---FLKK-----YENLAVIRTFSKAFSLAAQ 209 (335)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHTT---C-EEEEECTTHHHHCC--CCGG---GGGT-----CSSEEEEEESTTTTTCGGG
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhC---C-EEEEECcchhhcch--hHHH---Hhhh-----CCCEEEEecchhhcCCccc
Confidence 999999999999999999998877 7 89999999976532 2112 1121 4788999999999999999
Q ss_pred eeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEE
Q 046900 286 RVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLF 365 (442)
Q Consensus 286 RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~ 365 (442)
|+||+++ ++.+.+.++.....+..+++.|.++.++++.. +++++.++.++++++++.+.|++.|+++.+ .+++|
T Consensus 210 r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~ 283 (335)
T 1uu1_A 210 RVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALDHR----EIFEERTKFIVEERERMKSALREMGYRITD-SRGNF 283 (335)
T ss_dssp CCEEEEE-CHHHHHHHHHHSCTTCSCHHHHHHHHHHHHTH----HHHHHHHHHHHHHHHHHHHHHHHHTCCBCC-CCSSE
T ss_pred CeEEEEe-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHCCcEEcC-CCCeE
Confidence 9999999 67777777766666788999999999999863 346777888999999999999887877654 45678
Q ss_pred EEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNF 433 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~ 433 (442)
+|++++. . +..++++.|+++ ||.+.| .++++||+++. ++++++++++|+++
T Consensus 284 ~~~~~~~-~------~~~~~~~~l~~~-gi~v~~-------~~~~iRis~~~--~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 284 VFVFMEK-E------EKERLLEHLRTK-NVAVRS-------FREGVRITIGK--REENDMILRELEVF 334 (335)
T ss_dssp EEEECCT-H------HHHHHHHHHHHH-TEEEEE-------ETTEEEEECCC--HHHHHHHHHHHHCC
T ss_pred EEEECCC-C------CHHHHHHHHHHC-CEEEEE-------CCCeEEEEeCC--HHHHHHHHHHHHhh
Confidence 9999875 1 356788888876 999998 24689999975 57799999998764
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=1.1e-37 Score=306.88 Aligned_cols=344 Identities=12% Similarity=0.063 Sum_probs=262.0
Q ss_pred CCCceeeeecccc-cc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcE
Q 046900 46 NPSGVIQMGLAEN-QV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRI 123 (442)
Q Consensus 46 ~~~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i 123 (442)
++.++|||+.+++ .+ +++.+.+.+.+...... .....|++..|..++++++++++.+.++ .+++
T Consensus 41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~~v 106 (398)
T 3a2b_A 41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYG--------TGCAGSRFLNGTLDIHVELEEKLSAYVG------KEAA 106 (398)
T ss_dssp TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHC--------SCCCSBTTTTCCCHHHHHHHHHHHHHHT------CSEE
T ss_pred CCceEEEeecccccCCCCCHHHHHHHHHHHHHcC--------CCCCCcCcccCCcHHHHHHHHHHHHHhC------CCcE
Confidence 3567899999977 44 44555554443321100 0123466667888999999999998766 3689
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
++|+|+++++..++.+++++||.|+++.|+|+.+...++. .|++++.+|+ +|++.|++.+++... .++++
T Consensus 107 ~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~-~g~~~~~v~~-------~d~~~l~~~l~~~~~--~~~~~ 176 (398)
T 3a2b_A 107 ILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSRL-SFSKVIKYGH-------NNMEDLRAKLSRLPE--DSAKL 176 (398)
T ss_dssp EEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHH-SSSEEEEECT-------TCHHHHHHHHHTSCS--SSCEE
T ss_pred EEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHH-cCCceEEeCC-------CCHHHHHHHHHhhcc--CCceE
Confidence 9999999999999999999999999999999999999885 8999999985 478999998874210 16789
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCc-EEEEecCcccCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSER-VHIVYSLSKDLGL 282 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~-vi~~~S~SK~~g~ 282 (442)
|++++|+||||.+++ +++|+++|++||++||+||+|+.+.++. ...++.+... ..++ +++++||||.+|+
T Consensus 177 v~~~~~~nptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-----~~~~~di~~~s~sK~~~~ 247 (398)
T 3a2b_A 177 ICTDGIFSMEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGH-KGAGTASHFG-----LNDDVDLIMGTFSKSLAS 247 (398)
T ss_dssp EEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSG-GGCCHHHHHT-----CGGGCSEEEEESSSTTCS
T ss_pred EEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCCcccccCC-CCCchHhhcC-----CCcCCeEEEecccccccC
Confidence 999999999999998 7888999999999999999999877642 1234433321 1234 5899999999997
Q ss_pred CCceeEEEeecCHHHHHHHHHc-c--ccCCCcHHHHH-HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 046900 283 PGFRVGTIYSYNDKVVTTARRM-S--SFTLISSQTQY-LLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECL 358 (442)
Q Consensus 283 ~G~RiG~i~~~~~~~~~~~~~~-~--~~~~~s~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 358 (442)
+| ||+++ ++.+.+.+... . .....+++.|. ++..+++.. +++++.++.++++++++.+.|++.|+++.
T Consensus 248 ~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 319 (398)
T 3a2b_A 248 LG---GFVAG-DADVIDFLKHNARSVMFSASMTPASVASTLKALEII----QNEPEHIEKLWKNTDYAKAQLLDHGFDLG 319 (398)
T ss_dssp SC---EEEEE-CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH----HHCTHHHHHHHHHHHHHHHHHHHTTCCBC
T ss_pred CC---cEEEe-CHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH----hhCHHHHHHHHHHHHHHHHHHHhcCCCcC
Confidence 78 99999 56666666542 1 22334556665 445666532 24567888999999999999998888887
Q ss_pred cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC-CCCEEEEEeec-CCHHHHHHHHHHHHHHHHH
Q 046900 359 KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS-EPGWFRVCFAN-MSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 359 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~-~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~ 436 (442)
.+. |+|+|+.++... +..++++.|+++ ||.+.||..|... ..+++||+++. .+++++++++++|++++++
T Consensus 320 ~~~-g~~~~~~~~~~~------~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 320 ATE-SPILPIFIRSNE------KTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp SCC-SSEEEEECCCHH------HHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCC-CCEEEEEcCCHH------HHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 666 578999987521 367888999888 9999999988532 35789999984 4899999999999999876
Q ss_pred HH
Q 046900 437 RE 438 (442)
Q Consensus 437 ~~ 438 (442)
+.
T Consensus 392 ~~ 393 (398)
T 3a2b_A 392 AE 393 (398)
T ss_dssp CC
T ss_pred hC
Confidence 54
No 83
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=3.8e-35 Score=288.57 Aligned_cols=346 Identities=16% Similarity=0.106 Sum_probs=249.1
Q ss_pred CCceeeeeccccccc---HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcE
Q 046900 47 PSGVIQMGLAENQVS---FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRI 123 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i 123 (442)
...+|||+.+ ++++ ++.+.+.+.+....... ........|+...+..++|+.++++++ . ++.|
T Consensus 42 g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~----~~~~~~~~~g~~~~~~~l~~~la~~~~--------~-~~~i 107 (399)
T 3tqx_A 42 EKEVLNFCAN-NYLGLADHPALIKTAQTVVEQYGF----GMASVRFICGTQTIHKELEKDISEFLG--------T-DDTI 107 (399)
T ss_dssp TEEEEECSSC-CTTSCTTCHHHHHHHHHHHHHHCS----CCCSCCCCCCCBHHHHHHHHHHHHHHT--------C-SEEE
T ss_pred CeeEEEeecc-CcccccCCHHHHHHHHHHHHHhCC----CCCCcCccccCchHHHHHHHHHHHHHC--------C-CcEE
Confidence 4578999998 4433 34444444332211000 000011123344557888888888875 2 3466
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
++++| ++++..++.+++++||.|+++.|+|+.+...++. .|++++.++. .|++.|++.+++....+.++++
T Consensus 108 ~~~sG-t~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~-~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~ 178 (399)
T 3tqx_A 108 LYSSC-FDANGGLFETLLGPEDAIISDELNHASIIDGIRL-CKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKL 178 (399)
T ss_dssp EESCH-HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHS-CCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEE
T ss_pred EECch-HHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHH-cCCceeEeCC-------CCHHHHHHHHHhhhccCCCceE
Confidence 66655 7799999999999999999999999999999885 9999999985 4678999999876544447899
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
|++++|+||||.+++ +++|+++|++||+++|+||+|+...++. ...+..+...- ..+..++++|+||.+|
T Consensus 179 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~----~~~~di~~~s~sK~~~-- 248 (399)
T 3tqx_A 179 IATDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGE-NGRGTPEYCGV----ADRVDILTGTLGKALG-- 248 (399)
T ss_dssp EEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSST-TSCCHHHHHTC----TTCCSEEEEESSSSSC--
T ss_pred EEEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCC-CCCchHHhhCC----CCCCcEEEecchHhcc--
Confidence 999999999999999 8899999999999999999997433332 22334433220 1245688999999997
Q ss_pred CceeEEEeecCHHHHHHHHHccc----cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 046900 284 GFRVGTIYSYNDKVVTTARRMSS----FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK 359 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~~----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 359 (442)
|++.||+++ ++.+.+.+..... ....+++.+.++.+.++.. .++.++.++.++++++++.+.|++.|+++.+
T Consensus 249 g~~gG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 324 (399)
T 3tqx_A 249 GASGGYTSG-HKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL---KTEGPQLRKQLQENSRYFRAGMEKLGFQLVP 324 (399)
T ss_dssp SSCCEEEEE-CHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHHHHTCCBCC
T ss_pred cCceEEEEc-CHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHHHcCCCcCC
Confidence 445599999 5566666554321 1245666666666666532 2456788999999999999999998988876
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCC-CCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCH-CSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~-~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+.++ ++|+.++... +..++++.|+++ ||.+.|+..+. ..+.+++||+++ ..+++++++++++|++++++.
T Consensus 325 ~~~~-~~~~~~~~~~------~~~~~~~~l~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 325 GNHP-IIPVMLGDAQ------LATNMADHLLQE-GIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp CSSS-EEEEEEECHH------HHHHHHHHHHHT-TEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCC-EEEEEeCCHH------HHHHHHHHHHHC-CCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 6665 7788876532 367888999886 99999875443 234579999997 448999999999999998764
No 84
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.5e-34 Score=279.56 Aligned_cols=305 Identities=15% Similarity=0.176 Sum_probs=241.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEEEec
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~v~~ 174 (442)
..++++++++++.+.+| .+ ++++|++|+|+++++..++.+++++||.|+++.|+|++ +...+.. .|++++.+++
T Consensus 51 ~~~~~~~~~~~la~~~g--~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~-~g~~~~~v~~ 126 (386)
T 2dr1_A 51 YRKVHMDTVERLREFLE--VE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKRYKEVVES-NGRKAVVLEY 126 (386)
T ss_dssp HHHHHHHHHHHHHHHHT--CS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhC--CC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHHHHHHHHH-hCCceEEEec
Confidence 47889999999988877 22 36789999999999999999999999999999999988 7777774 8999999998
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s 254 (442)
+. ++.+|+++|++.+++ +.++++|++++|+||||.+.+ +++|+++|++||+++|+||+|+.+.+. .+
T Consensus 127 ~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~----~~ 193 (386)
T 2dr1_A 127 EP--GKAVKPEDLDDALRK----NPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDKLVFVDAVSAMGGAD----IK 193 (386)
T ss_dssp CT--TCCCCHHHHHHHHHH----CTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTBTTBC----CC
T ss_pred CC--CCCCCHHHHHHHHhc----CCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCCeEEEEccccccCcc----cc
Confidence 75 467899999999964 237899999999999999988 788899999999999999999965431 12
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHH----------------H----ccccCCCcHHH
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR----------------R----MSSFTLISSQT 314 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~----------------~----~~~~~~~s~~~ 314 (442)
+ . ..+.++++.|+||.++.++ ++||++++ +.+.+.++ . ....+..+++.
T Consensus 194 ~---~------~~~~di~~~s~sK~~~~~~-g~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (386)
T 2dr1_A 194 F---D------KWGLDVVFSSSQKAFGVPP-GLAIGAFS-ERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQ 262 (386)
T ss_dssp T---T------TTTCSEEEEETTSTTCCCS-SCEEEEEC-HHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHH
T ss_pred c---c------ccCCcEEEEeccccccCCC-ceEEEEEC-HHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHH
Confidence 1 1 1255788999999998552 48999995 55554431 1 12235667788
Q ss_pred HHHHHHHhcCchhHHH--HHHHHHHHHHHHHHHHHHHHHhCCCeeecCC---ceEEEEEecCCcccccChhhHHHHHHHH
Q 046900 315 QYLLASMLSNKKFTEN--YIKTNRERLQKRYQMIIEGLRSAGIECLKGN---AGLFCWMNLSPLLEEQTREGELALWDSM 389 (442)
Q Consensus 315 q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~l~~~l 389 (442)
|.++..+++. ..+ .+++.+++++++++++.+.|++.|+++..++ .+.++|+.++... +..++++.|
T Consensus 263 ~~a~~~~l~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l 333 (386)
T 2dr1_A 263 VFGINVALRI---IEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGI------KGDEVYEAM 333 (386)
T ss_dssp HHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTC------CHHHHHHHH
T ss_pred HHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCCC------CHHHHHHHH
Confidence 8888877763 223 2667888999999999999998888877664 3678899987432 267888899
Q ss_pred HHcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHHHhhc
Q 046900 390 LHEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKRERRR 441 (442)
Q Consensus 390 ~~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~~~~~ 441 (442)
+++ ||.+.||..|. ..+++||+++. .+++++++++++|++++++...++
T Consensus 334 ~~~-gi~v~~~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 383 (386)
T 2dr1_A 334 RKR-GFELAKGYGSV--KEKTFRIGHMGYMKFEDIQEMLDNLREVINELKKQK 383 (386)
T ss_dssp HHT-TEECEECCGGG--TTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHC-CeEEecCcccc--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcCCCC
Confidence 888 99999998653 35799999983 489999999999999998876543
No 85
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=6.9e-35 Score=287.17 Aligned_cols=342 Identities=17% Similarity=0.110 Sum_probs=248.8
Q ss_pred CCCceeeeeccccccc---HHHHHHHHHhCCCCcccCCCCCCCCcccccC--CCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 46 NPSGVIQMGLAENQVS---FDLLEEYLEQQPEASTWGKGAPGFRENALFQ--DYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
+...+|||+.+ ++++ ++.+.+.+.+.... . +.. .....|+ ...+..++|++++++++ ++
T Consensus 43 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~--~--~~~--~~~~~~~~g~~~~~~~l~~~la~~~g--------~~- 106 (401)
T 1fc4_A 43 DGSHVINFCAN-NYLGLANHPDLIAAAKAGMDS--H--GFG--MASVRFICGTQDSHKELEQKLAAFLG--------ME- 106 (401)
T ss_dssp TSCEEEECCCS-CTTSCTTCHHHHHHHHHHHHH--H--CSC--CCSCHHHHCCBHHHHHHHHHHHHHHT--------CS-
T ss_pred CCccEEEeecc-CcccccCCHHHHHHHHHHHHH--h--CCC--CCCCCcccCCcHHHHHHHHHHHHHhC--------CC-
Confidence 45678999988 5553 45555544433211 0 000 0011232 24578899999999984 33
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
++|++++| ++++..++++++++||.|+++.|+|+.+...++. .|++++.++. .|++.|++.+++..+.+.+
T Consensus 107 ~~i~~~sG-s~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~-~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~ 177 (401)
T 1fc4_A 107 DAILYSSC-FDANGGLFETLLGAEDAIISDALNHASIIDGVRL-CKAKRYRYAN-------NDMQELEARLKEAREAGAR 177 (401)
T ss_dssp EEEEESCH-HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHT-SCSEEEEECT-------TCHHHHHHHHHHHHHTTCS
T ss_pred cEEEeCCh-HHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHH-cCCceEEECC-------CCHHHHHHHHHHhhccCCC
Confidence 56666665 6688889999999999999999999888888884 8999998872 4789999998764333336
Q ss_pred eeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC-cCCC-CCCCcccHHHHHhhhcCCCCCcEEEEecCcc
Q 046900 201 VRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS-GSAF-SSSEFVSIAEILEARQYKDSERVHIVYSLSK 278 (442)
Q Consensus 201 ~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~-~~~~-~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK 278 (442)
+++|++++|+||||.+++ +++|.++|+++|+++|+||+|+ ++.+ ++..+.+...+ ..+.+++++|+||
T Consensus 178 ~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~-------~~~~di~~~s~sK 247 (401)
T 1fc4_A 178 HVLIATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDV-------MGRVDIITGTLGK 247 (401)
T ss_dssp SEEEEEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTC-------TTCCSEEEEESSS
T ss_pred ceEEEEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCC-------CcCCcEEEecchh
Confidence 789999999999999999 8888999999999999999996 6653 33322111111 1245688999999
Q ss_pred cC-CCCCceeEEEeecCHHHHHHHHHccc----cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 279 DL-GLPGFRVGTIYSYNDKVVTTARRMSS----FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 279 ~~-g~~G~RiG~i~~~~~~~~~~~~~~~~----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
.+ |.+| ||+++ ++.+.+.+..... .+..+++.|.++.+.++... + .++.++.++++++++.+.|++.
T Consensus 248 ~~~~~~g---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~-~~~~~~~~~~~~~~l~~~L~~~ 319 (401)
T 1fc4_A 248 ALGGASG---GYTAA-RKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVE---A-GSELRDRLWANARQFREQMSAA 319 (401)
T ss_dssp TTCSSSC---EEEEE-CHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHH---T-CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hccCCCC---EEEEc-CHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHh---c-CHHHHHHHHHHHHHHHHHHHHc
Confidence 99 5454 99999 5666666654331 23567888888887776321 1 3567788899999999999988
Q ss_pred CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC-CCCEEEEEee-cCCHHHHHHHHHHHH
Q 046900 354 GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS-EPGWFRVCFA-NMSEQTLEVALKRIH 431 (442)
Q Consensus 354 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~-~~~~iRls~~-~~~~e~i~~~l~~l~ 431 (442)
|+++. +..++++|++++... +..++++.|.++ ||.+.||..|+.. ..+++||+++ ..+++++++++++|+
T Consensus 320 g~~~~-~~~~~~~~~~~~~~~------~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 391 (401)
T 1fc4_A 320 GFTLA-GADHAIIPVMLGDAV------VAQKFARELQKE-GIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFT 391 (401)
T ss_dssp TCCBC-CSSSSEEEEEEECHH------HHHHHHHHHHHT-TEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred CCccc-CCCCCEEEEEcCChH------HHHHHHHHHHHC-CcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 88877 455668899886421 366788888777 9999999877543 2468999998 238999999999999
Q ss_pred HHHHHHH
Q 046900 432 NFMQKRE 438 (442)
Q Consensus 432 ~~l~~~~ 438 (442)
+++++.+
T Consensus 392 ~~~~~~~ 398 (401)
T 1fc4_A 392 RIGKQLG 398 (401)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 9988654
No 86
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.7e-34 Score=283.58 Aligned_cols=298 Identities=15% Similarity=0.151 Sum_probs=236.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCC-cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEEEe
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLN-RIVVTAGATAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVPIH 173 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~v~ 173 (442)
..++++++++++.+.+| ++++ +|++|+|+++++..++.+++++||.|++++|+|+. +...++. .|++++.++
T Consensus 65 ~~~~~~~~~~~la~~~g----~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~-~g~~~~~v~ 139 (393)
T 1vjo_A 65 FLALMDEIQSLLRYVWQ----TENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGR-YGADVRTIS 139 (393)
T ss_dssp HHHHHHHHHHHHHHHHT----CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhC----CCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHHHHHHHHH-cCCceEEEe
Confidence 57889999999988876 4677 99999999999999999999999999999999998 8888884 899999999
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
++. ++.+|++.|++.+++. ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|+ ++.. ..
T Consensus 140 ~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~---~g~~-~~ 205 (393)
T 1vjo_A 140 KPW--GEVFSLEELRTALETH-----RPAILALVHAETSTGARQP---LEGVGELCREFGTLLLVDTVTS---LGGV-PI 205 (393)
T ss_dssp CCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTT---TTTS-CC
T ss_pred cCC--CCCCCHHHHHHHHhhC-----CceEEEEeccCCCcceecc---HHHHHHHHHHcCCEEEEECCcc---ccCc-CC
Confidence 875 4678999999999753 5789999999999999998 7788899999999999999998 2221 11
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc---------------------cccC-CCc
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM---------------------SSFT-LIS 311 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~---------------------~~~~-~~s 311 (442)
++ . ..+..+++.|+||.++.+| |+||++++ +.+.+.++.. ...+ ..+
T Consensus 206 ~~---~------~~~~di~~~s~sK~l~~~~-~~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 274 (393)
T 1vjo_A 206 FL---D------AWGVDLAYSCSQKGLGCSP-GASPFTMS-SRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAP 274 (393)
T ss_dssp CT---T------TTTCSEEECCSSSTTCSCS-SCEEEEEC-HHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCC
T ss_pred cc---c------ccCccEEEEcCcccccCCC-ceEEEEEC-HHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCC
Confidence 21 1 1255688999999998777 99999994 5555555321 1112 567
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc---eEEEEEecCCcccccChhhHHHHHHH
Q 046900 312 SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA---GLFCWMNLSPLLEEQTREGELALWDS 388 (442)
Q Consensus 312 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (442)
.+.|.++..+++.. .+.++++.++.++++++++.+.|++.|+++..+.+ +.++|+.++... +..++++.
T Consensus 275 ~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 346 (393)
T 1vjo_A 275 INLYYALREALRLI--AQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGV------DGKAVARR 346 (393)
T ss_dssp HHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTC------CHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCCCC------CHHHHHHH
Confidence 78888888887642 13346788899999999999999988888877654 346788876422 25678888
Q ss_pred HHHcCcEEEeCCCCCCCCCCCEEEEEe-e-cCCHHHHHHHHHHHHHHH
Q 046900 389 MLHEVKLNISPGSSCHCSEPGWFRVCF-A-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 389 l~~~~gi~v~pg~~f~~~~~~~iRls~-~-~~~~e~i~~~l~~l~~~l 434 (442)
|++++||.+.||+.|. .++++||++ + ..+++++++++++|++++
T Consensus 347 l~~~~gi~v~~g~~~~--~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 347 LLNEHNIEVGGGLGEL--AGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp HHHHHCEECEECCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred HHhhCCEEEecCcccc--CCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 8776699999998764 367999994 3 326778999999999876
No 87
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=5.4e-35 Score=285.78 Aligned_cols=302 Identities=15% Similarity=0.152 Sum_probs=228.4
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc----CCCCeEEEcCCCCcChHHhH---hh
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA----DPGDALLVPTPYYPGFDRDL---RW 163 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~---~~ 163 (442)
|....+..++|++++++++ +++++|++|+|+++++.+++.++. ++||.|+++.|+|+.+...+ .
T Consensus 40 ~~~~~~~~~l~~~la~~~g--------~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~- 110 (384)
T 1eg5_A 40 IEANLHMEKAREKVAKVLG--------VSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLS- 110 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHT--------SCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHcC--------CCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHH-
Confidence 4445677899999999885 567899999999999999999997 79999999999999886655 5
Q ss_pred hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcC--cEEEEecc
Q 046900 164 RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN--IHLVSDEI 241 (442)
Q Consensus 164 ~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~--~~vi~De~ 241 (442)
..|++++.+|+++ ++.+|++.|++.+++ ++++|++++|+||||.+++ +++|.++|++++ ++||+||+
T Consensus 111 ~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~li~Dea 179 (384)
T 1eg5_A 111 MKGFKVKYVPVDS--RGVVKLEELEKLVDE------DTFLVSIMAANNEVGTIQP---VEDVTRIVKKKNKETLVHVDAV 179 (384)
T ss_dssp HTTCEEEECCBCT--TSCBCHHHHHHHCCT------TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHCTTCEEEEECT
T ss_pred hcCCEEEEEccCC--CCccCHHHHHHHhCC------CCeEEEEECCCCCcccccC---HHHHHHHHHhcCCceEEEEEhh
Confidence 3799999999875 467899999998864 7899999999999999999 678888899999 99999999
Q ss_pred CCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHH-HHHHHHHc-----cccCCCcHHHH
Q 046900 242 YSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDK-VVTTARRM-----SSFTLISSQTQ 315 (442)
Q Consensus 242 y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~-~~~~~~~~-----~~~~~~s~~~q 315 (442)
|+ ++... .++. . .+..+++.|+||.+|++| +||++++++. +...+... ...+..+.+.|
T Consensus 180 ~~---~~~~~-~~~~----~-----~~~di~~~s~sK~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (384)
T 1eg5_A 180 QT---IGKIP-FSLE----K-----LEVDYASFSAHKFHGPKG--VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGI 244 (384)
T ss_dssp TT---TTTSC-CCCT----T-----TCCSEEEEEGGGGTSCTT--CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHH
T ss_pred hh---cCCcc-cCch----h-----cCCCEEEecHHHhcCCCc--eEEEEEcCCCccccccccCcccccccCCCCChHHH
Confidence 98 33221 1211 1 245688999999999878 7999996542 12221110 12356778888
Q ss_pred HHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC---ceEEEEEecCCcccccChhhHHHHHHHHHHc
Q 046900 316 YLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN---AGLFCWMNLSPLLEEQTREGELALWDSMLHE 392 (442)
Q Consensus 316 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 392 (442)
.++.++++.. .+++++.++.++++++++.+.|++.|+++..+. .+.++++.++.. +..++.+.|.++
T Consensus 245 ~a~~~al~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~ 314 (384)
T 1eg5_A 245 VGAARAMEIA---VEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNI-------RGSTLQNLLSGY 314 (384)
T ss_dssp HHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHHHHT
T ss_pred HHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHHhhC
Confidence 8888777642 345778889999999999999988888876542 124666766532 256788887655
Q ss_pred CcEEEeCCCCCCCC-----------------CCCEEEEEeec-CCHHHHHHHHHHHHHHHHHHH
Q 046900 393 VKLNISPGSSCHCS-----------------EPGWFRVCFAN-MSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 393 ~gi~v~pg~~f~~~-----------------~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~~ 438 (442)
||.+.||..|+.. ..+++||+++. .+++++++++++|++++++.+
T Consensus 315 -gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 377 (384)
T 1eg5_A 315 -GIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLD 377 (384)
T ss_dssp -TEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred -CeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999877532 13789999982 389999999999999988654
No 88
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=4.2e-34 Score=279.93 Aligned_cols=335 Identities=10% Similarity=0.088 Sum_probs=242.1
Q ss_pred CCceeeeecccc-cc-cHHHHHHHHHhCCCCcccCCCCCCCCccccc--CCCcchHHHHHHHHHHHHHHhCCCCccCCCc
Q 046900 47 PSGVIQMGLAEN-QV-SFDLLEEYLEQQPEASTWGKGAPGFRENALF--QDYHGLKSFRQAMASFMEQIRGGRAKFDLNR 122 (442)
Q Consensus 47 ~~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~ 122 (442)
+..+|||+.+++ .+ +++.+.+.+.+..... +.. .....| +...+..++|++++++++ ++ +.
T Consensus 38 g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~--~~~~~~~~g~~~~~~~l~~~la~~~g--------~~-~~ 102 (384)
T 1bs0_A 38 DRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQF----GIG--SGGSGHVSGYSVVHQALEEELAEWLG--------YS-RA 102 (384)
T ss_dssp TEEEEECSCCCTTSGGGCHHHHHHHHHHHHHH----CSC--CCSBTTTTCCCHHHHHHHHHHHHHHT--------CS-EE
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHh----CCC--CCCcCcccCChHHHHHHHHHHHHHhC--------CC-cE
Confidence 456899999876 32 3344554444332110 000 001223 345678999999999984 32 55
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
|++++| ++++..++.+++++||.|+++.|+|+.+...++. .|++++.+|. .|++.|++.+++. ..+++
T Consensus 103 i~~~sG-t~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~-~g~~~~~~~~-------~d~~~l~~~l~~~---~~~~~ 170 (384)
T 1bs0_A 103 LLFISG-FAANQAVIAAMMAKEDRIAADRLSHASLLEAASL-SPSQLRRFAH-------NDVTHLARLLASP---CPGQQ 170 (384)
T ss_dssp EEESCH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHT-SSSEEEEECT-------TCHHHHHHHHHSC---CSSCE
T ss_pred EEeCCc-HHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHH-cCCCEEEeCC-------CCHHHHHHHHHhc---CCCCe
Confidence 666666 8999999999999999999999999999988885 8999999873 4789999988741 11367
Q ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC
Q 046900 203 GVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL 282 (442)
Q Consensus 203 ~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 282 (442)
++++++|+||||.+++ +++|+++|++||++||+||+|+.+.++.. ..++..... ....++++|+||.+|+
T Consensus 171 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~------~~~di~~~s~sK~~~~ 240 (384)
T 1bs0_A 171 MVVTEGVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQ-GRGSCWLQK------VKPELLVVTFGKGFGV 240 (384)
T ss_dssp EEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGG-GCCHHHHTT------CCCSEEEEESSSTTSS
T ss_pred EEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCC-CCchHHhcC------CCCcEEEeeccchhhc
Confidence 8899999999999999 77889999999999999999987655311 112222211 1233889999999997
Q ss_pred CCceeEEEeecCHHHHHHHHHcc-cc---CCCcHHHHHHHHHHhcCchhHHH-HHHHHHHHHHHHHHHHHHHHHhCCCee
Q 046900 283 PGFRVGTIYSYNDKVVTTARRMS-SF---TLISSQTQYLLASMLSNKKFTEN-YIKTNRERLQKRYQMIIEGLRSAGIEC 357 (442)
Q Consensus 283 ~G~RiG~i~~~~~~~~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~ 357 (442)
+| ||+++ ++.+.+.+.... .+ ...+++.+.++.+.++.. .+ +.++.+++++++++++.+.|++.|+++
T Consensus 241 ~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 313 (384)
T 1bs0_A 241 SG---AAVLC-SSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVI---RSDEGDARREKLAALITRFRAGVQDLPFTL 313 (384)
T ss_dssp CC---EEEEE-CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH---HSHHHHHHHHHHHHHHHHHHHHHTTSSCEE
T ss_pred cC---cEEEe-CHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 77 99999 566666655432 11 246778887777766532 21 456778889999999999999888887
Q ss_pred ecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC-CCCEEEEEeec-CCHHHHHHHHHHHHHH
Q 046900 358 LKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS-EPGWFRVCFAN-MSEQTLEVALKRIHNF 433 (442)
Q Consensus 358 ~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~-~~~~iRls~~~-~~~e~i~~~l~~l~~~ 433 (442)
.+ .++.++|+.++.. .+..++++.|+++ ||.+.||..|+.. ..+++||+++. .+++++++++++|+++
T Consensus 314 ~~-~~~~~~~~~~~~~------~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 314 AD-SCSAIQPLIVGDN------SRALQLAEKLRQQ-GCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp CS-CCSSBCCEEEESH------HHHHHHHHHHHHT-TEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred cC-CCCCEEEEEeCCH------HHHHHHHHHHHHC-CcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 65 4455778887642 1367888888877 9999999877532 34789999983 3799999999999864
No 89
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=4.6e-34 Score=282.67 Aligned_cols=341 Identities=15% Similarity=0.164 Sum_probs=245.3
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCC--CcchHHHHHHHHHHHHHHhCCCCcc-CCCcEE
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQD--YHGLKSFRQAMASFMEQIRGGRAKF-DLNRIV 124 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~-~~~~i~ 124 (442)
.++|+|+.+++..+++.+.+.+.+...... + ........|++ ..+..++|++++++++ . ++++|+
T Consensus 27 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~---~-~~~~~~~~y~~~~~~~~~~l~~~la~~~~--------~~~~~~v~ 94 (420)
T 1t3i_A 27 HPLVYLDNAATSQKPRAVLEKLMHYYENDN---A-NVHRGAHQLSVRATDAYEAVRNKVAKFIN--------ARSPREIV 94 (420)
T ss_dssp EECEECBTTTCCCCCHHHHHHHHHHHHHTC---C-CC--CCSHHHHHHHHHHHHHHHHHHHHTT--------CSCGGGEE
T ss_pred CceEEecCCccCCCCHHHHHHHHHHHHhcc---C-CCCcccchHHHHHHHHHHHHHHHHHHHcC--------CCCCCeEE
Confidence 457899998876544555444443221000 0 00001234654 4678899999999875 3 578999
Q ss_pred EecChHHHHHHHHHhh----cCCCCeEEEcCCCCcC----hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 125 VTAGATAANELLTFIL----ADPGDALLVPTPYYPG----FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
+|+|+++++.+++.++ +++||.|+++.|+|+. +...++ ..|++++.++++. ++.+|++.|++++++
T Consensus 95 ~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~--~~~~d~~~l~~~l~~--- 168 (420)
T 1t3i_A 95 YTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAA-KTGAVLKFVQLDE--QESFDLEHFKTLLSE--- 168 (420)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHH-HHCCEEEEECBCT--TSSBCHHHHHHHCCT---
T ss_pred EcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHH-hcCcEEEEeccCC--CCCcCHHHHHHhhCC---
Confidence 9999999999999999 8999999999999998 455556 3899999999874 567899999998864
Q ss_pred cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecC
Q 046900 197 KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSL 276 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~ 276 (442)
++++|++++|+||||.+++ +++|.++|+++|++||+||+|+.... ..++..+ +..+++.|+
T Consensus 169 ---~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~---------~~di~~~s~ 229 (420)
T 1t3i_A 169 ---KTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY----PLDVQLI---------DCDWLVASG 229 (420)
T ss_dssp ---TEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHH---------TCSEEEEEG
T ss_pred ---CceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc----cCchhhc---------CCCEEEEeh
Confidence 7899999999999999999 78889999999999999999985332 1233332 345889999
Q ss_pred cccCCCCCceeEEEeecCHHHHHHHHHcccc----------------------CCCcHHHHHHHHH-HhcCchhHHHHHH
Q 046900 277 SKDLGLPGFRVGTIYSYNDKVVTTARRMSSF----------------------TLISSQTQYLLAS-MLSNKKFTENYIK 333 (442)
Q Consensus 277 SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~----------------------~~~s~~~q~~~~~-~l~~~~~~~~~~~ 333 (442)
||.+|.+| +||+++ ++.+.+.++..... .+.+++.|.++.. .++... +.+++
T Consensus 230 sK~~~~~g--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~ 304 (420)
T 1t3i_A 230 HKMCAPTG--IGFLYG-KEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT--DLGME 304 (420)
T ss_dssp GGTTSCTT--CEEEEE-CHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH--HHCHH
T ss_pred hhhcCCCc--eEEEEE-chHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHH--HhHHH
Confidence 99998777 899999 56666555433211 1244555655433 333111 12356
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCeeecCC------ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC-
Q 046900 334 TNRERLQKRYQMIIEGLRSA-GIECLKGN------AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC- 405 (442)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~- 405 (442)
+.+++++++++++.+.|++. |+++..+. ++++ ++.++.. +..++.+.|.+ +||.+.||..|..
T Consensus 305 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~l~~-~gi~v~~~~~~~~~ 375 (420)
T 1t3i_A 305 NIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALA-SFNVAGL-------HASDVATMVDQ-DGIAIRSGHHCTQP 375 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEE-EEEETTB-------CHHHHHHHHHT-TTEECBCSCTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEE-EEEECCC-------CHHHHHHHHHH-CCeEEeeccccchH
Confidence 77888999999999999987 88887664 5544 5567631 24567766654 5999999975521
Q ss_pred -----CCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHHHh
Q 046900 406 -----SEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 406 -----~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
..++++||+++. .+++++++++++|+++++.+++
T Consensus 376 ~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 376 LHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp HHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 115789999983 3899999999999999887543
No 90
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=1.7e-33 Score=277.31 Aligned_cols=341 Identities=14% Similarity=0.154 Sum_probs=243.1
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCcc-CCCcEEEe
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKF-DLNRIVVT 126 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~~~i~~t 126 (442)
.+++.|+.+.+..+++.+.+.+.+........ .........|....+..++|++++++++ . ++++|++|
T Consensus 22 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~la~~~~--------~~~~~~v~~~ 91 (406)
T 1kmj_A 22 LPLAYLDSAASAQKPSQVIDAEAEFYRHGYAA--VHRGIHTLSAQATEKMENVRKRASLFIN--------ARSAEELVFV 91 (406)
T ss_dssp EECEECCTTTCCCCCHHHHHHHHHHHHHTCCC--CSSCSSHHHHHHHHHHHHHHHHHHHHTT--------CSCGGGEEEE
T ss_pred CceEEecCCccCCCCHHHHHHHHHHHHhhcCC--CCCCcchHHHHHHHHHHHHHHHHHHHcC--------CCCCCeEEEe
Confidence 35788888776544444444443321100000 0000001123345678899999999875 3 57899999
Q ss_pred cChHHHHHHHHHhh----cCCCCeEEEcCCCCcChH----HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 127 AGATAANELLTFIL----ADPGDALLVPTPYYPGFD----RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 127 ~G~~~ai~~~~~~l----~~~gd~Vl~~~p~y~~~~----~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
+|+++++.+++.++ +++||.|+++.|+|++.. ..++ ..|++++.+++++ ++.+|++.|++.+.+
T Consensus 92 ~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~--~~~~d~~~l~~~l~~----- 163 (406)
T 1kmj_A 92 RGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCA-RVGAELRVIPLNP--DGTLQLETLPTLFDE----- 163 (406)
T ss_dssp SSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHH-HHTCEEEEECBCT--TSCBCGGGHHHHCCT-----
T ss_pred CChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHH-hCCCEEEEEecCC--CCCcCHHHHHHHhcc-----
Confidence 99999999999999 899999999999997643 3355 3799999999875 467899999998864
Q ss_pred CceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcc
Q 046900 199 MRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSK 278 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK 278 (442)
++++|++++|+||||.+++ +++|+++|++||+++|+||+|+.... ..++... +..+++.|+||
T Consensus 164 -~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~----~~~~~~~---------~~d~~~~s~~K 226 (406)
T 1kmj_A 164 -KTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH----PVDVQAL---------DCDFYVFSGHK 226 (406)
T ss_dssp -TEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHH---------TCSEEEEEGGG
T ss_pred -CCeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC----CCccccc---------CCCEEEEEchh
Confidence 7899999999999999999 88899999999999999999986321 2233222 45688999999
Q ss_pred cCCCCCceeEEEeecCHHHHHHHHHccc----------------------c-CCCcHHHHHHHH-HHhcCchhHHHHHHH
Q 046900 279 DLGLPGFRVGTIYSYNDKVVTTARRMSS----------------------F-TLISSQTQYLLA-SMLSNKKFTENYIKT 334 (442)
Q Consensus 279 ~~g~~G~RiG~i~~~~~~~~~~~~~~~~----------------------~-~~~s~~~q~~~~-~~l~~~~~~~~~~~~ 334 (442)
.+|.+| +||+++ ++.+.+.++.... + .+.+.+.|.++. +.++... ..++++
T Consensus 227 ~~g~~G--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~ 301 (406)
T 1kmj_A 227 LYGPTG--IGILYV-KEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVS--ALGLNN 301 (406)
T ss_dssp TTSCTT--CEEEEE-CHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH--HHCHHH
T ss_pred ccCCCC--cEEEEE-eHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHH--HcCHHH
Confidence 998888 899999 5666655443221 0 123455555443 3443211 124567
Q ss_pred HHHHHHHHHHHHHHHHHhC-CCeeecC--CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC------
Q 046900 335 NRERLQKRYQMIIEGLRSA-GIECLKG--NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC------ 405 (442)
Q Consensus 335 ~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~------ 405 (442)
.+++++++++++.+.|++. |+++..+ .++++.| .++.. +..++.+.|.++ ||.+.||..|..
T Consensus 302 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~ 372 (406)
T 1kmj_A 302 IAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAF-NLGKH-------HAYDVGSFLDNY-GIAVRTGHHCAMPLMAYY 372 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEE-EETTC-------CHHHHHHHHHHT-TEECEEECTTCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEE-EECCC-------CHHHHHHHHhhC-CcEEEeccccchHHHHhc
Confidence 7888899999999999987 8888877 7776655 56531 255677777555 999999986531
Q ss_pred CCCCEEEEEeecC-CHHHHHHHHHHHHHHHHHH
Q 046900 406 SEPGWFRVCFANM-SEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 406 ~~~~~iRls~~~~-~~e~i~~~l~~l~~~l~~~ 437 (442)
..++++||+++.. ++++++++++.|+++++.+
T Consensus 373 g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 373 NVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp TCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 1257999999843 8999999999999988754
No 91
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=2.4e-33 Score=276.20 Aligned_cols=306 Identities=12% Similarity=0.069 Sum_probs=227.1
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCc
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGI 167 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~ 167 (442)
.|+...+..++|+++|++++ . +++|++|+|++ ++..++.++. .+||.|+++.|+|+.+...++. .|+
T Consensus 86 ~~~~~~~~~~l~~~la~~~~--------~-~~~i~~~sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~-~g~ 154 (401)
T 2bwn_A 86 ISGTTAYHRRLEAEIAGLHQ--------K-EAALVFSSAYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKR-NAG 154 (401)
T ss_dssp TBCCBHHHHHHHHHHHHHTT--------C-SEEEEESCHHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHH-SCC
T ss_pred ccCChHHHHHHHHHHHHHhC--------C-CcEEEECCcHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHH-cCC
Confidence 46666788999999999975 2 57888888877 7776666653 5899999999999999988884 899
Q ss_pred EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCC
Q 046900 168 KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAF 247 (442)
Q Consensus 168 ~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~ 247 (442)
+++.++.+ |++.+++.+++.. ..++++|++++|+||||.+++ +++|+++|++||+++|+||+|+...+
T Consensus 155 ~~~~v~~~-------d~~~le~~l~~~~--~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~ 222 (401)
T 2bwn_A 155 PKRIFRHN-------DVAHLRELIAADD--PAAPKLIAFESVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMY 222 (401)
T ss_dssp CEEEECTT-------CHHHHHHHHHHSC--TTSCEEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTS
T ss_pred eEEEEcCC-------CHHHHHHHHHhhc--cCCceEEEEecCcCCCCCcCC---HHHHHHHHHHcCCEEEEecccccccc
Confidence 99999863 6889999887421 126889999999999999999 78889999999999999999996555
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc---c-CCCcHHHHHHHHHHhc
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS---F-TLISSQTQYLLASMLS 323 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~---~-~~~s~~~q~~~~~~l~ 323 (442)
+.. ...+..... . ..+.+++++||||++|++| ||+++ ++.+.+.+..... + ...+++.+.++.+.++
T Consensus 223 ~~~-g~~~~~~~~-~---~~~~~i~~~s~sK~~~~~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~ 293 (401)
T 2bwn_A 223 GPR-GAGVAERDG-L---MHRIDIFNGTLAKAYGVFG---GYIAA-SARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIA 293 (401)
T ss_dssp STT-SCCHHHHHT-C---GGGCSEEEEESSSTTCSCC---EEEEE-CHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHH
T ss_pred CCC-CceeeeccC-c---cccCcEEEeechhhccCCC---CEEec-CHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHH
Confidence 322 122322111 0 0134688999999999888 99998 5666665553221 1 2234566766666654
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCC
Q 046900 324 NKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSC 403 (442)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f 403 (442)
.... ..+++.+++++++++++.+.|++.|+++..+.++ ++|+.++... +..++++.|++++||.+.|+..|
T Consensus 294 ~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~~~------~~~~~~~~L~~~~gi~v~~~~~~ 364 (401)
T 2bwn_A 294 FLKT--AEGQKLRDAQQMHAKVLKMRLKALGMPIIDHGSH-IVPVVIGDPV------HTKAVSDMLLSDYGVYVQPINFP 364 (401)
T ss_dssp HHTS--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSS-CEEEECCCHH------HHHHHHHHHHHHHCEECCEECTT
T ss_pred HHHh--cccHHHHHHHHHHHHHHHHHHHHCCCcccCCCCC-eEEEEeCChH------HHHHHHHHHHhcCCEEEeecCCC
Confidence 2211 1246677888999999999998878888777776 7888887521 35678888874449999999877
Q ss_pred CCC-CCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 404 HCS-EPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 404 ~~~-~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
+.. +.+++|++++ ..+++++++++++|++++++
T Consensus 365 ~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 365 TVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp TSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred CCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 543 3368999998 23899999999999998765
No 92
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=6.7e-33 Score=271.91 Aligned_cols=303 Identities=11% Similarity=0.088 Sum_probs=227.6
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCC-------------CCeEEEcCCCCcChHHhHh
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADP-------------GDALLVPTPYYPGFDRDLR 162 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~-------------gd~Vl~~~p~y~~~~~~~~ 162 (442)
+..++++++++++.+.++ +++++|++|+|+++++..++.++..+ ||.|+++.|+|+.+...++
T Consensus 66 ~~~~~~~~l~~~la~~~~----~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~ 141 (397)
T 3f9t_A 66 GTKLLEEKAVALLGSLLN----NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGRE 141 (397)
T ss_dssp HHHHHHHHHHHHHHHHTT----CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhC----CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHH
Confidence 667888888888887765 67889999999999999999998776 9999999999999999998
Q ss_pred hhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccC
Q 046900 163 WRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY 242 (442)
Q Consensus 163 ~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y 242 (442)
. .|++++.+|+++ ++.+|++.|++.+++. +++++++++|+||||.+.+ +++|+++|++||++||+||+|
T Consensus 142 ~-~g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~ 210 (397)
T 3f9t_A 142 M-MDLEYIYAPIKE--DYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDN---IEELSKIAKENNIYIHVDAAF 210 (397)
T ss_dssp H-HTCEEEEECBCT--TSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTT
T ss_pred H-cCceeEEEeeCC--CCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCC---HHHHHHHHHHhCCeEEEEccc
Confidence 5 899999999875 4679999999999752 6789999999999999988 778899999999999999999
Q ss_pred CcCCCCCCCc-ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccC-------------
Q 046900 243 SGSAFSSSEF-VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT------------- 308 (442)
Q Consensus 243 ~~~~~~~~~~-~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~------------- 308 (442)
+.+.++.... .++..+........ +..+++.|+||.++ +|.|+||++++++.+.+.+.....+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (397)
T 3f9t_A 211 GGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRV 288 (397)
T ss_dssp GGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCC
T ss_pred cchhhhhcccccccccccccccccc-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccCCCccccccccc
Confidence 8754421110 00000000000001 33477899999875 78899999997766554443222221
Q ss_pred CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHH
Q 046900 309 LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDS 388 (442)
Q Consensus 309 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (442)
..+...+.++...+. ...+++..++++++++++.+.|++.|+++..+..+.++|+.++. ..++.+.
T Consensus 289 ~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~ 354 (397)
T 3f9t_A 289 GFGGACTYAVLRYLG-----REGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDED---------YKEVCKK 354 (397)
T ss_dssp SHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECTT---------HHHHHHH
T ss_pred cchHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeCC---------HHHHHHH
Confidence 113455555555553 23356677778899999999999888886555555577887764 4678888
Q ss_pred HHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHH
Q 046900 389 MLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 389 l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~ 435 (442)
|.++ ||.+.+|.. ++++||+++ ..+++++++++++|+++++
T Consensus 355 l~~~-gi~v~~~~~-----~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 355 LRDR-GIYVSVCNC-----VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp HHHT-TCBCEECSS-----SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred HHhC-CeEEeccCC-----CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 8777 999999753 579999998 3389999999999998864
No 93
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=5.3e-34 Score=277.62 Aligned_cols=338 Identities=14% Similarity=0.138 Sum_probs=236.9
Q ss_pred Cceeeeecccccc-cHHHHHHHHHhCCCCccc-CCCCCCCCcccccCCCcchHHHHHH-HHHHHHHHhCCCCccCCCcEE
Q 046900 48 SGVIQMGLAENQV-SFDLLEEYLEQQPEASTW-GKGAPGFRENALFQDYHGLKSFRQA-MASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 48 ~~~i~l~~~~n~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Y~~~~g~~~lr~~-ia~~l~~~~~~~~~~~~~~i~ 124 (442)
+++|.|+.+.+.. +++.+.+.+.+....... ..+ . .....|.+..+..++|++ ++++++ .+ +|+
T Consensus 7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~l~~~~la~~~~--------~~--~v~ 73 (371)
T 2e7j_A 7 KDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFC--T-TGRLDEIKTPPIHDFIHNQLPKFLG--------CD--VAR 73 (371)
T ss_dssp -CCEECCHHHHTCCCCHHHHHHHHHC-----------------------CCHHHHHHTHHHHHTT--------SS--EEE
T ss_pred CCcEEecccccCCCCCHHHHHHHHHHHhhcccCCcc--c-cccchhhHHHHHHHHHHHHHHHHcC--------CC--EEE
Confidence 3567777744322 335555555554321100 000 0 001234455788999999 999975 23 999
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEe--cCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIH--CDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
+|+|+++++..++.+++++||.|+++.|+|+.+...++. .|++++.++ .++ ++.+|++.|++.+++.... .+++
T Consensus 74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~--~~~~d~~~l~~~l~~~~~~-~~~~ 149 (371)
T 2e7j_A 74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAER-AGLNIALVPKTDYP--DYAITPENFAQTIEETKKR-GEVV 149 (371)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHH-TTCEEEEECCCCTT--TCCCCHHHHHHHHHHHTTT-SCEE
T ss_pred EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHH-cCCeEEEeecccCC--CCCcCHHHHHHHHHhhccc-CCeE
Confidence 999999999999999999999999999999999988884 899999999 654 4679999999999853211 3789
Q ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC
Q 046900 203 GVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL 282 (442)
Q Consensus 203 ~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 282 (442)
++++++|+||||.+++ +++|+++|++||++||+||+|+.+.+. .++..+ +..++++|+||.++
T Consensus 150 ~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~---------~~di~~~s~sK~~~- 212 (371)
T 2e7j_A 150 LALITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEI---------GADFIVGSGHKSMA- 212 (371)
T ss_dssp EEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHH---------TCSEEEEEHHHHSS-
T ss_pred EEEEECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhc---------CCCEEEecCCcCCC-
Confidence 9999999999999999 588889999999999999999974431 233333 23388999999997
Q ss_pred CCceeEEEeecCHHHHHH-HHHccc---------cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHH--HHHHHHHHHHH
Q 046900 283 PGFRVGTIYSYNDKVVTT-ARRMSS---------FTLISSQTQYLLASMLSNKKFTENYIKTNRERL--QKRYQMIIEGL 350 (442)
Q Consensus 283 ~G~RiG~i~~~~~~~~~~-~~~~~~---------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~l~~~L 350 (442)
+|.|+||++++++ +.+. ++.... .+..+...+.++...++ +..+ +..+++ +++++++.+.|
T Consensus 213 ~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~~~~---~~~~~~~~~~~~~~l~~~L 285 (371)
T 2e7j_A 213 ASGPIGVMGMKEE-WAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFP---HVRE---RIKRWDEEVEKARRFAAEM 285 (371)
T ss_dssp CCSSCEEEEECTT-TTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHH---HHHH---HGGGHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEech-hhhhhccccccCcccccccccCCcCHHHHHHHHHHHH---HHHH---HHHHHHHHHHHHHHHHHHH
Confidence 4569999999654 4343 333222 23334444444444443 2121 455666 78888999999
Q ss_pred HhCCCeeecCC--ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC----CCCCEEE-EEeec--CCHH
Q 046900 351 RSAGIECLKGN--AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC----SEPGWFR-VCFAN--MSEQ 421 (442)
Q Consensus 351 ~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~----~~~~~iR-ls~~~--~~~e 421 (442)
++.|+++..+. .+.++|++++ +..++.+.|.++ ||.+.| ..|.. ..++++| ++++. .+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~-gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~ 354 (371)
T 2e7j_A 286 EKLGIKQLGDNPHNHDLMFFHAE---------VLYEISKKAKGG-RFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDE 354 (371)
T ss_dssp HHTTCEEESSSSCCSSEEEEECH---------HHHHHHHHSSSG-GGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHH
T ss_pred HHcCcEEecCCCccCceEEEECC---------CHHHHHHHHHHC-CEEEEe-ccccccccCCCCCceEEEEeeccCCCHH
Confidence 88888887663 3458899875 156788888755 999988 43322 1257899 99984 4899
Q ss_pred HHHHHHHHHHHHHHHH
Q 046900 422 TLEVALKRIHNFMQKR 437 (442)
Q Consensus 422 ~i~~~l~~l~~~l~~~ 437 (442)
++++++++|+++++++
T Consensus 355 ~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 355 EVDYVLNAFKEIIEKY 370 (371)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998753
No 94
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=4.3e-33 Score=273.72 Aligned_cols=298 Identities=14% Similarity=0.145 Sum_probs=229.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCC-cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH--HhHhhhcCcEEEEEe
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLN-RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD--RDLRWRTGIKIVPIH 173 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~~G~~v~~v~ 173 (442)
..++|++++++++ .+++ +|++|+|+++++..++.+++++||.|+++.|+|+.+. ..++ ..|++++.++
T Consensus 53 ~~~l~~~la~~~~--------~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~v~ 123 (396)
T 2ch1_A 53 MDEVKDGLRYIFQ--------TENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSE-RYGADVRTIE 123 (396)
T ss_dssp HHHHHHHHHHHHT--------CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHH-HTTCEEEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHHHHHHHH-HcCCceEEec
Confidence 7889999999986 4566 8999999999999999999999999999999999984 3566 4899999999
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
++. ++.+|+++|++.+++. ++++|++++|+||||.+++ +++|+++|+++|++||+||+|+. +..+ .
T Consensus 124 ~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~Dea~~~---g~~~-~ 189 (396)
T 2ch1_A 124 GPP--DRPFSLETLARAIELH-----QPKCLFLTHGDSSSGLLQP---LEGVGQICHQHDCLLIVDAVASL---CGVP-F 189 (396)
T ss_dssp CCT--TSCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTB---TTBC-C
T ss_pred CCC--CCCCCHHHHHHHHHhC-----CCCEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEEccccc---cCCc-c
Confidence 875 4679999999999753 5789999999999999999 77888999999999999999983 2221 1
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc-------------------------cccC
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM-------------------------SSFT 308 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~-------------------------~~~~ 308 (442)
++.. .+..+++.|++|.++ ++.++||++++ +.+.+.+... ...+
T Consensus 190 ~~~~---------~~~d~~~~s~~K~~~-~~~g~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (396)
T 2ch1_A 190 YMDK---------WEIDAVYTGAQKVLG-APPGITPISIS-PKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHH 258 (396)
T ss_dssp CTTT---------TTCCEEECCCC-CCC-CCSSCEEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCC
T ss_pred chhh---------cCcCEEEEcCCcccc-CCCCeEEEEEC-HHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCC
Confidence 2111 122366789999875 44557999994 5555554321 0113
Q ss_pred CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCce----EEEEEecCCcccccChhhHHH
Q 046900 309 LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAG----LFCWMNLSPLLEEQTREGELA 384 (442)
Q Consensus 309 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~ 384 (442)
..+...|.++.++++.. .++++++.+++++++++++.+.|++.|+++..+.++ .++|+.++... +..+
T Consensus 259 ~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 330 (396)
T 2ch1_A 259 TVASNLIFALREALAQI--AEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGV------DWWK 330 (396)
T ss_dssp CCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTC------CHHH
T ss_pred CCcHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcCCCC------CHHH
Confidence 45667787777777632 134567788899999999999998888888776653 47888886422 2668
Q ss_pred HHHHHHHcCcEEEeCCCCCCCCCCCEEEEEe-e-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 385 LWDSMLHEVKLNISPGSSCHCSEPGWFRVCF-A-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 385 l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~-~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
+++.|++++||.+.+|..+. .++++||++ + ..+++++++++++|++++++.+
T Consensus 331 ~~~~L~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 331 VSQYAMNNFSLEVQGGLGPT--FGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp HHHHHHHHHCBCCBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCEEEecCcccc--CCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 88888876699999987543 357999999 4 3478999999999999998764
No 95
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=3.4e-34 Score=280.83 Aligned_cols=297 Identities=18% Similarity=0.228 Sum_probs=222.3
Q ss_pred ccCC-CcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHh----Hhh
Q 046900 90 LFQD-YHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRD----LRW 163 (442)
Q Consensus 90 ~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~----~~~ 163 (442)
.|++ ..+..++|++++++++ +++++|++|+|+++++..++.++ +++||.|+++.|+|+.+... ++
T Consensus 53 ~y~~~~~~~~~l~~~la~~~g--------~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~- 123 (390)
T 1elu_A 53 ANQHIQQLIAQLRQALAETFN--------VDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAA- 123 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--------SCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHHHHHHHHHHcC--------CCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHH-
Confidence 4554 3578899999999874 56789999999999999999999 89999999999999987654 34
Q ss_pred hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHH----hcCcEEEEe
Q 046900 164 RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFAT----RKNIHLVSD 239 (442)
Q Consensus 164 ~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~----~~~~~vi~D 239 (442)
..|++++.++++.+.++.+|++.|++.+++ ++++|++++|+||||.+++ +++|.++|+ ++|+++|+|
T Consensus 124 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~D 194 (390)
T 1elu_A 124 RFGITYRFFPVAATLNQGDAAAVLANHLGP------KTRLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVD 194 (390)
T ss_dssp HHCCEEEEECCGGGSSSSCHHHHHHTTCCT------TEEEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEE
T ss_pred HhCcEEEEEcCCCCCCccchHHHHHHhcCC------CceEEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEE
Confidence 379999999986434677999999988764 7899999999999999999 788888998 999999999
Q ss_pred ccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc---------------
Q 046900 240 EIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--------------- 304 (442)
Q Consensus 240 e~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--------------- 304 (442)
|+|+... ....+ . ..+..+++.|+||.++ +|.++||+++++ .+.+.+...
T Consensus 195 ea~~~g~----~~~~~---~------~~~~d~~~~s~~K~~~-~~~g~G~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~ 259 (390)
T 1elu_A 195 GAQSAGS----LPLDF---S------RLEVDYYAFTGHKWFA-GPAGVGGLYIHG-DCLGEINPTYVGWRSITYGAKGEP 259 (390)
T ss_dssp CTTTBTT----BCCCT---T------TSCCSEEEEESSSTTC-CCTTCEEEEECT-TTGGGCCCCSCCTTTEEECTTSCE
T ss_pred cccccCC----cCCCh---h------hcCCCEEEcccccccc-CCCceEEEEECH-HhHhhcCCccccCCcccccccCcc
Confidence 9998421 11111 1 1245688999999543 567799999954 444333221
Q ss_pred ---------cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec---CCceEEEEEecC
Q 046900 305 ---------SSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK---GNAGLFCWMNLS 371 (442)
Q Consensus 305 ---------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~~~g~~~~~~~~ 371 (442)
...+..+.+.+.++...++.... ..++++.+++++++++++.+.|++. |+++.. +.++++.| +++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~-~~~ 337 (390)
T 1elu_A 260 TGWAEGGKRFEVATSAYPQYAGLLAALQLHQR-QGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSF-TVD 337 (390)
T ss_dssp EEECSGGGGGCCSCCCHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEE-EEC
T ss_pred cccccchHhhCCCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEE-EcC
Confidence 11234555666666555542110 1136778888999999999999987 888774 45775555 776
Q ss_pred CcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHH
Q 046900 372 PLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNF 433 (442)
Q Consensus 372 ~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~ 433 (442)
... +..++.+.|.++ ||.+.+|. .++++||+++ ..+++++++++++|+++
T Consensus 338 ~~~------~~~~~~~~l~~~-gi~v~~~~-----~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 338 SPL------GHRAIVQKLEEQ-RIYLRTIA-----DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp SSS------CHHHHHHHHHHT-TEECEEET-----TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred CCC------CHHHHHHHHHHC-CEEEEecC-----CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 322 256788888665 99999975 3578999985 34899999999998753
No 96
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=1.5e-32 Score=269.53 Aligned_cols=299 Identities=14% Similarity=0.071 Sum_probs=224.5
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH--HhHhhhcCcEEEEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD--RDLRWRTGIKIVPI 172 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~~G~~v~~v 172 (442)
.+..++|++++++++ +++++|++|+|+++++.+++.+++++||.|+++.|+|+.+. ..++ ..|++++.+
T Consensus 42 ~~~~~l~~~la~~~g--------~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~g~~~~~v 112 (392)
T 2z9v_A 42 LLYEKVVDKAQKAMR--------LSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKGFGYWAK-RYSPHLLEI 112 (392)
T ss_dssp HHHHHHHHHHHHHTT--------CSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHH-HHCSCEEEE
T ss_pred HHHHHHHHHHHHHhC--------CCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHH-HcCCceEEe
Confidence 356788888888864 46789999999999999999999999999999999998752 3344 379999999
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+++++ +.+|++.|++.+++ ..++++|++++|+||||.+++ +++|.++|+++|++||+||+|+. +.. .
T Consensus 113 ~~~~~--~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~---g~~-~ 179 (392)
T 2z9v_A 113 EVPYN--EAIDPQAVADMLKA----HPEITVVSVCHHDTPSGTINP---IDAIGALVSAHGAYLIVDAVSSF---GGM-K 179 (392)
T ss_dssp ECCTT--SCCCHHHHHHHHHH----CTTCCEEEEESEEGGGTEECC---HHHHHHHHHHTTCEEEEECTTTB---TTB-S
T ss_pred eCCCC--CCCCHHHHHHHHhc----CCCCcEEEEeccCCCCceecc---HHHHHHHHHHcCCeEEEEccccc---CCc-c
Confidence 98753 36899999999964 236889999999999999998 67888999999999999999983 221 1
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccC-CCCCceeEEEeecCHHHHHHHHHc----------------------cccCC
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDL-GLPGFRVGTIYSYNDKVVTTARRM----------------------SSFTL 309 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~G~RiG~i~~~~~~~~~~~~~~----------------------~~~~~ 309 (442)
.++.. .+..+++.|+||.+ |.+| +||+++ ++.+.+.++.. ...+.
T Consensus 180 ~~~~~---------~~~d~~~~s~sK~~~~~~g--~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 247 (392)
T 2z9v_A 180 THPED---------CKADIYVTGPNKCLGAPPG--LTMMGV-SERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFT 247 (392)
T ss_dssp CCGGG---------GTCSEEEECSSSTTCCCSC--CEEEEE-CHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSC
T ss_pred ccccc---------ccceEEEecCcccccCCCc--eeEEEE-CHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCC
Confidence 12211 13457889999965 4455 599999 45555555421 11233
Q ss_pred CcHHHHHHHHHHhcCchhHHHH-HHHHHHHHHHHHHHHHHHHHhCCCeeec-CC---ceEEEEEecCCcccccChhhHHH
Q 046900 310 ISSQTQYLLASMLSNKKFTENY-IKTNRERLQKRYQMIIEGLRSAGIECLK-GN---AGLFCWMNLSPLLEEQTREGELA 384 (442)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~---~g~~~~~~~~~~~~~~~~~~~~~ 384 (442)
.+...+.++.+.++ +..++ +++.+++++++++++.+.|++.|+++.. +. .+.++|+.++... +..+
T Consensus 248 ~~~~~~~a~~~al~---~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 318 (392)
T 2z9v_A 248 PSVSEINGLDVALD---LYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDGV------DEKA 318 (392)
T ss_dssp CCHHHHHHHHHHHH---HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCTTC------CHHH
T ss_pred CCHHHHHHHHHHHH---HHHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECCCCC------CHHH
Confidence 44555555555554 22333 6678888999999999999888887766 32 4667888886422 2567
Q ss_pred HHHHHHHcCcEEEeCCCCCCCCCCCEEEEEe-e-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 385 LWDSMLHEVKLNISPGSSCHCSEPGWFRVCF-A-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 385 l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~-~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
+.+.|.+++||.+.+|..+. .++++||++ + ..+++++++++++|++++++++
T Consensus 319 l~~~L~~~~gi~v~~g~~~~--~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 319 LRQAARARYGVVFSSGRGET--LGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp HHHHHHHHHCEECEECCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCEEEecCCCCC--CCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 88888776699999988653 357999994 5 4589999999999999988654
No 97
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=8e-33 Score=267.86 Aligned_cols=336 Identities=14% Similarity=0.118 Sum_probs=240.1
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
+++|+|+.+.+..+++.+.+.+.+.. ..|....|..++++++++++.+.+| +++++|++|+
T Consensus 13 p~~i~l~~~~~~~~~~~v~~a~~~~~---------------~~~~~~~g~~~~~~~~~~~l~~~~g----~~~~~v~~~~ 73 (359)
T 1svv_A 13 PKPYSFVNDYSVGMHPKILDLMARDN---------------MTQHAGYGQDSHCAKAARLIGELLE----RPDADVHFIS 73 (359)
T ss_dssp --CEECSCSCSSCCCHHHHHHHHHHT---------------TCCCCSTTCSHHHHHHHHHHHHHHT----CTTSEEEEES
T ss_pred CeeEEecCCCcCCCCHHHHHHHHHHH---------------hhccccccccHHHHHHHHHHHHHhC----CCCccEEEeC
Confidence 35789998777665666666666543 1355566778999999999998876 5688999999
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh--HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH-hcCCceeEE
Q 046900 128 GATAANELLTFILADPGDALLVPTPYYPGFDRD--LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE-SKDMRVRGV 204 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~--~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~~v 204 (442)
|+++++..++.+++++||.|++++|+|+.+... ++ ..|++++.+|.+ ++.+|++.|++.+++.. ..+.++++|
T Consensus 74 g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v 149 (359)
T 1svv_A 74 GGTQTNLIACSLALRPWEAVIATQLGHISTHETGAIE-ATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLV 149 (359)
T ss_dssp CHHHHHHHHHHHHCCTTEEEEEETTSHHHHSSTTHHH-HTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEE
T ss_pred CchHHHHHHHHHHhCCCCEEEEcccchHHHHHHHHHh-cCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEE
Confidence 999999999999999999999999999988773 66 489999999975 46799999999998620 112248999
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC-cccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE-FVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~-~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
++++| ||||.+++.+++++|+++|++||+++|+||+|..+.++..+ ......+... ..+++.|++|..+
T Consensus 150 ~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-------~d~~~~s~~K~g~-- 219 (359)
T 1svv_A 150 YISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARL-------TDMFYIGATKAGG-- 219 (359)
T ss_dssp EEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHH-------CSEEEEECTTTTC--
T ss_pred EEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhc-------CCEEEEecccCCC--
Confidence 99999 79999999999999999999999999999999543222111 1122111111 1256789999744
Q ss_pred CceeEEEeecCHHHHHHHHHc---ccc-CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 046900 284 GFRVGTIYSYNDKVVTTARRM---SSF-TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK 359 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~---~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 359 (442)
...+|+++++ +.+.+.++.. ... ...+......+.+++.... .++.+++++++++++.+.|+..|+++..
T Consensus 220 ~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 293 (359)
T 1svv_A 220 MFGEALIILN-DALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNL-----FFELGAHSNKMAAILKAGLEACGIRLAW 293 (359)
T ss_dssp SSCEEEEECS-GGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTH-----HHHHHHHHHHHHHHHHHHHHHTTCCBSS
T ss_pred CCceEEEEEc-ccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHhccCCeEEcc
Confidence 3567999984 4444333322 111 1122222333345565532 3567788889999999999555888887
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
+.+++|+|++++ .++++.|++++||.+.+.. ...++++||+++ ..+++++++++++|++++++
T Consensus 294 ~~~~~~~~~~~~-----------~~~~~~l~~~~gi~v~~~~---~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 294 PSASNQLFPILE-----------NTMIAELNNDFDMYTVEPL---KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp CCSSSEECBEEE-----------HHHHHHHTTTEECEEEEEE---TTTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred CCccceEEEEcC-----------HHHHHHHHHhcCEEEEecc---cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 888889998764 2677777666699983210 123578999876 23899999999999998765
No 98
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=1.3e-32 Score=273.24 Aligned_cols=348 Identities=15% Similarity=0.123 Sum_probs=245.2
Q ss_pred CCCceeeeecccc-cc-cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcE
Q 046900 46 NPSGVIQMGLAEN-QV-SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRI 123 (442)
Q Consensus 46 ~~~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i 123 (442)
.+..+|||+.+.+ .+ +++.+.+.+.+....... +.. .....++......+|++.++++++ . ++.
T Consensus 62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~--~~~--~~~~~~G~~~~~~~l~~~la~~~g--------~--~~~ 127 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGS--GTC--GSRMLNGTFHDHMEVEQALRDFYG--------T--TGA 127 (427)
T ss_dssp TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCS--CCC--SCTTTTCCCHHHHHHHHHHHHHHT--------C--SEE
T ss_pred CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCC--CCc--ccccccCCcHHHHHHHHHHHHHhC--------C--Cce
Confidence 3567899999864 22 334444444332211000 000 001112223345778888887764 2 255
Q ss_pred EEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 124 VVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
++++++++++..++.+++++||.|+++.|+|..+...++. .|++++.++. .|++.|++.+++.. ..++++
T Consensus 128 i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~-~g~~~~~~~~-------~d~~~le~~l~~~~--~~~~~~ 197 (427)
T 2w8t_A 128 IVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQ-GNAEIVRFRH-------NSVEDLDKRLGRLP--KEPAKL 197 (427)
T ss_dssp EEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHH-SCSEEEEECT-------TCHHHHHHHHHTSC--SSSCEE
T ss_pred EEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHH-cCCeeEEeCC-------CCHHHHHHHHHhcc--CCCCeE
Confidence 5666667799999999999999999999999999999885 8999998873 58999999987521 126789
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
|++++|+||||.+++ +++|+++|++||+++|+||+|+.+.++.. ..++..... . ..+.+++++||||.+|++
T Consensus 198 v~~~~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~-g~~~~~~~~---~-~~~~di~~~s~sK~~g~~ 269 (427)
T 2w8t_A 198 VVLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPN-GRGVYEAQG---L-EGQIDFVVGTFSKSVGTV 269 (427)
T ss_dssp EEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTT-SCCHHHHTT---C-TTCCSEEEEESSSTTCSC
T ss_pred EEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC-CCchHhhcC---C-CcCCcEEEecchhhhccC
Confidence 999999999999998 88899999999999999999998877532 233333211 0 124578899999999877
Q ss_pred CceeEEEeecCHHHHHHHHHcc----ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeee-
Q 046900 284 GFRVGTIYSYNDKVVTTARRMS----SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECL- 358 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~- 358 (442)
| ||++++ +.+.+.+.... ..+..+++.+.++.+.++... ++++.++.++++++++.+.|++.|+++.
T Consensus 270 g---G~v~~~-~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 341 (427)
T 2w8t_A 270 G---GFVVSN-HPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM----TAHEKRERLWSNARALHGGLKAMGFRLGT 341 (427)
T ss_dssp C---EEEEEC-CTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHHHHHHHHHHTCEESC
T ss_pred C---CEEEeC-HHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 7 999995 45555444321 113456666665556665322 1356788889999999999988888887
Q ss_pred cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC-CCCEEEEEeec-CCHHHHHHHHHHHHHHHHH
Q 046900 359 KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS-EPGWFRVCFAN-MSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 359 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~-~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~ 436 (442)
++..+.++|+.++.. ....++++.|+++ ||.+.||..|+.. +.+++||+++. .+++++++++++|++++++
T Consensus 342 ~~~~~~~~~~~~~~~------~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~ 414 (427)
T 2w8t_A 342 ETCDSAIVAVMLEDQ------EQAAMMWQALLDG-GLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRA 414 (427)
T ss_dssp SSCCSSEEEEEESSH------HHHHHHHHHHHHT-TEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEECCH------HHHHHHHHHHHHC-CeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 441455889988652 1367888898887 9999999877543 34689999983 4899999999999999987
Q ss_pred HHhh
Q 046900 437 RERR 440 (442)
Q Consensus 437 ~~~~ 440 (442)
..+.
T Consensus 415 ~~~~ 418 (427)
T 2w8t_A 415 VGVI 418 (427)
T ss_dssp HTCC
T ss_pred hCcc
Confidence 6543
No 99
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=5.9e-33 Score=267.89 Aligned_cols=331 Identities=13% Similarity=0.158 Sum_probs=227.4
Q ss_pred CCceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEe
Q 046900 47 PSGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVT 126 (442)
Q Consensus 47 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 126 (442)
|-.+|+|+.+++++|.+.+.+.+.+... ....|.+..+..+||+++|++++ .++++++
T Consensus 2 ~~~~i~~~~~~~~~p~~~~~~a~~~~~~------------~~~~y~~~~~~~~l~~~la~~~g----------~~~~~~~ 59 (347)
T 1jg8_A 2 PHMMIDLRSDTVTKPTEEMRKAMAQAEV------------GDDVYGEDPTINELERLAAETFG----------KEAALFV 59 (347)
T ss_dssp ---CEECSCGGGCCCCHHHHHHHHTCCC------------CCGGGTCCHHHHHHHHHHHHHHT----------CSEEEEE
T ss_pred CceEEEeccccCCCCCHHHHHHHhcCCC------------CCcccCCChHHHHHHHHHHHHhC----------CceEEEe
Confidence 3467899999999887777777765421 11357666788999999999985 2467888
Q ss_pred cChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 127 AGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 127 ~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
+|+++++.+++.+++++||+|+++.|+|..... .+. ..|++++.+ .++ ++.+|+++|++++++......++++
T Consensus 60 ~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~-~~g~~~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~~ 135 (347)
T 1jg8_A 60 PSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAMAV-LSGVMPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSL 135 (347)
T ss_dssp SCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTTHHHH-HTCCEEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEE
T ss_pred cCcHHHHHHHHHHhcCCCCEEEEcCcchhhhccccchhh-ccCeEEEEe-cCC--CCccCHHHHHHHhccccccccCceE
Confidence 888999999999999999999999999865332 345 389999888 432 4568999999887521000126899
Q ss_pred EEEeCCCCCC-CcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC--CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccC
Q 046900 204 VLITNPSNPL-GATIQRSVLEELLDFATRKNIHLVSDEIYSGS--AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDL 280 (442)
Q Consensus 204 v~l~~P~NPt-G~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~--~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~ 280 (442)
|++++|+||| |.+++.+++++|+++|+++|++||+|++|... .+.+. +...+... .+. ++.|+||.+
T Consensus 136 v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~~-----~d~--~~~s~sK~l 205 (347)
T 1jg8_A 136 IAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGV---PVKEYAGY-----ADS--VMFCLSKGL 205 (347)
T ss_dssp EEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCC---CHHHHHHT-----CSE--EEEESSSTT
T ss_pred EEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCC---ChHHhccc-----ccE--EEEeccccc
Confidence 9999999999 99999999999999999999999999987521 11121 33333322 243 345899999
Q ss_pred CCCCceeEE-EeecCHHHHHHHHHcccc----CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 046900 281 GLPGFRVGT-IYSYNDKVVTTARRMSSF----TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGI 355 (442)
Q Consensus 281 g~~G~RiG~-i~~~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 355 (442)
+.+ +|| +++ ++.+.+.+...... ...+.+.+.++...++.. .+.+++ ..++++.+.+.|++.|+
T Consensus 206 ~~~---~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~-~~~~~~~l~~~L~~~~~ 274 (347)
T 1jg8_A 206 CAP---VGSVVVG-DRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKM------VDRLKE-DHENARFLALKLKEIGY 274 (347)
T ss_dssp CCS---SCEEEEE-CHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHS------STTHHH-HHHHHHHHHHHHHHHTC
T ss_pred CCC---ceEEEEc-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHH------HHHHHH-HHHHHHHHHHHHHhcCc
Confidence 743 575 555 56665554433222 122334444444444321 111122 23456777888877676
Q ss_pred eee-cCCceEEEEEecCC-cccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHH
Q 046900 356 ECL-KGNAGLFCWMNLSP-LLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHN 432 (442)
Q Consensus 356 ~~~-~~~~g~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~ 432 (442)
++. .+..+.|+|++++. .. +..++++.|.++ ||.+.++. .+++|+++. ..+++++++++++|++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~-gi~v~~~~------~~~iRl~~~~~~~~e~i~~~~~~l~~ 341 (347)
T 1jg8_A 275 SVNPEDVKTNMVILRTDNLKV------NAHGFIEALRNS-GVLANAVS------DTEIRLVTHKDVSRNDIEEALNIFEK 341 (347)
T ss_dssp BCCGGGCCSSEEEEECTTSSS------CHHHHHHHHHHH-TEECEEEE------TTEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred eeccCCCcceEEEEEcccccC------CHHHHHHHHHHC-CCEEecCC------CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 652 23445579999874 11 256888888776 99999852 468999985 4489999999999999
Q ss_pred HHHHH
Q 046900 433 FMQKR 437 (442)
Q Consensus 433 ~l~~~ 437 (442)
++++.
T Consensus 342 ~l~~~ 346 (347)
T 1jg8_A 342 LFRKF 346 (347)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 98754
No 100
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=1.1e-32 Score=269.30 Aligned_cols=298 Identities=15% Similarity=0.144 Sum_probs=224.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc----CCCCeEEEcCCCCcChHHhHhh--hcCcEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA----DPGDALLVPTPYYPGFDRDLRW--RTGIKI 169 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v 169 (442)
...++|+.++++++ +++++|++|+|+++++.+++.++. ++||.|++++|+|+.+...+.. ..|+++
T Consensus 44 ~~~~l~~~la~~~g--------~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~ 115 (382)
T 4eb5_A 44 AVQEAREKVAKLVN--------GGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEV 115 (382)
T ss_dssp HHHHHHHHHHHHHT--------CTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEE
T ss_pred HHHHHHHHHHHHhC--------CCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEE
Confidence 45677777777764 467899999999999999999998 8999999999999988766542 269999
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
+.+++++ ++.+|++.|++.+++ ++++|++++|+||||.+++ +++|+++|+++|++ |+||+|+. +.
T Consensus 116 ~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~-i~D~a~~~---g~ 180 (382)
T 4eb5_A 116 EYIPVGK--YGEVDVSFIDQKLRD------DTILVSVQHANNEIGTIQP---VEEISEVLAGKAAL-HIDATASV---GQ 180 (382)
T ss_dssp EEECBCT--TSCBCHHHHHHHCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE-EEECTTTB---TT
T ss_pred EEeccCC--CCccCHHHHHHHhcC------CCeEEEEeccCCCccccCC---HHHHHHHHHHCCCE-EEEcchhc---CC
Confidence 9999875 457899999998864 7889999999999999999 67889999999999 99999983 22
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHH-HHHHHH-----HccccCCCcHHHHHHHHHHhc
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDK-VVTTAR-----RMSSFTLISSQTQYLLASMLS 323 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~-~~~~~~-----~~~~~~~~s~~~q~~~~~~l~ 323 (442)
...++..+ +..+++.|+||.+|.+| +||++++++. +...+. .....+..+...+.++...++
T Consensus 181 -~~~~~~~~---------~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 248 (382)
T 4eb5_A 181 -IEVDVEKI---------GADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAE 248 (382)
T ss_dssp -BCCCHHHH---------TCSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHH
T ss_pred -cccCcccc---------CCCEEEeehHHhcCCCc--eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHH
Confidence 22233322 34578899999988666 6999886552 211110 011123445555555555554
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc---eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeC
Q 046900 324 NKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNA---GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISP 399 (442)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~p 399 (442)
+..+++++.+++++++++++.+.|++. |+++..+.+ +.++|+.++.. +..++.+.|.++ ||.+.+
T Consensus 249 ---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~-gi~v~~ 317 (382)
T 4eb5_A 249 ---ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI-------EGESIVLSLDMA-GIQAST 317 (382)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTS-------CHHHHHHHHHHH-TCBCBC
T ss_pred ---HHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCc-------CHHHHHHHHHHC-CEEEec
Confidence 223456778889999999999999887 777766542 34677777631 256788888766 999999
Q ss_pred CCCCCCC-----------------CCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 400 GSSCHCS-----------------EPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 400 g~~f~~~-----------------~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
|..|... .++++||+++ ..+++++++++++|++++++.++
T Consensus 318 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 318 GSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp CCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9865431 2479999998 23899999999999999988775
No 101
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=2.7e-32 Score=268.81 Aligned_cols=287 Identities=17% Similarity=0.182 Sum_probs=211.7
Q ss_pred cccCCCcchH---HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH----hH
Q 046900 89 ALFQDYHGLK---SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR----DL 161 (442)
Q Consensus 89 ~~Y~~~~g~~---~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~ 161 (442)
..|+. .|.+ +|+++++++++ .+++++++|+++++..++.+++++||.|+++.|+|+.+.. .+
T Consensus 54 ~~Y~~-~~~~~~~~l~~~ia~~~g----------~~~~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~ 122 (404)
T 1e5e_A 54 YIYTR-LGNPTVSNLEGKIAFLEK----------TEACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHAL 122 (404)
T ss_dssp CCBTT-TCCHHHHHHHHHHHHHHT----------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHH
T ss_pred ccccC-CcChHHHHHHHHHHHHhC----------CCcEEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHH
Confidence 45766 4545 89999999875 2378888888999999999999999999999999999887 56
Q ss_pred hhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHh-cCcEEEEec
Q 046900 162 RWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATR-KNIHLVSDE 240 (442)
Q Consensus 162 ~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~-~~~~vi~De 240 (442)
+. .|++++.++++ |++.|++.+++ ++++|++++|+||||.+++ +++|+++|++ +|+++|+||
T Consensus 123 ~~-~g~~~~~v~~~-------d~~~l~~~i~~------~t~~v~l~~p~NptG~v~~---l~~i~~la~~~~~~~li~De 185 (404)
T 1e5e_A 123 TK-FGIQVDFINTA-------IPGEVKKHMKP------NTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADN 185 (404)
T ss_dssp HH-TTCEEEEECTT-------STTHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEEC
T ss_pred HH-cCCEEEEECCC-------CHHHHHHhcCC------CCcEEEEECCCCCCCcccC---HHHHHHHHHhhcCCEEEEEC
Confidence 64 89999999864 67889888764 7899999999999999997 8899999999 999999999
Q ss_pred cCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHccccC---CCcHHHHH
Q 046900 241 IYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRMSSFT---LISSQTQY 316 (442)
Q Consensus 241 ~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~~~~~---~~s~~~q~ 316 (442)
+|+.+.+.. ++ . .++++++.|+||.|+.+|+|+ ||++++++.+.+.++.....+ .++++.|.
T Consensus 186 ~~~~~~~~~----~~-~---------~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~ 251 (404)
T 1e5e_A 186 TFCSPMITN----PV-D---------FGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAW 251 (404)
T ss_dssp TTTCTTTCC----GG-G---------GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHH
T ss_pred CCchhhhCC----cc-c---------cCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHH
Confidence 999876531 11 1 156789999999999999998 999995444442666554433 46788888
Q ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC---------------CCeeecCC----ceEEEEEecCCccccc
Q 046900 317 LLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA---------------GIECLKGN----AGLFCWMNLSPLLEEQ 377 (442)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------------g~~~~~~~----~g~~~~~~~~~~~~~~ 377 (442)
++...++... ...+...++.+.+.+.|++. |+++..++ ++++.| +++.
T Consensus 252 ~~~~~l~~~~-------~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~~~~----- 318 (404)
T 1e5e_A 252 LITRGLSTLN-------IRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITF-ILKS----- 318 (404)
T ss_dssp HHHHHHTTHH-------HHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEE-EETT-----
T ss_pred HHHHhHhHHH-------HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEE-EeCC-----
Confidence 8888887532 12223334444555555543 22222232 787777 7764
Q ss_pred ChhhHHHHHHHHHHcCcEEEeCCCCCCC-----------------------CC--CCEEEEEeecCCHHHHHHHHHHHHH
Q 046900 378 TREGELALWDSMLHEVKLNISPGSSCHC-----------------------SE--PGWFRVCFANMSEQTLEVALKRIHN 432 (442)
Q Consensus 378 ~~~~~~~l~~~l~~~~gi~v~pg~~f~~-----------------------~~--~~~iRls~~~~~~e~i~~~l~~l~~ 432 (442)
..+....++++.|| +.+|..|+. .+ ++++|||++. |++++++++|++
T Consensus 319 ----~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~---e~~~~li~~l~~ 390 (404)
T 1e5e_A 319 ----GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI---EDADELIADFKQ 390 (404)
T ss_dssp ----HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHH
T ss_pred ----CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHH
Confidence 12234456677799 666666652 12 5899999986 678889999988
Q ss_pred HHHHHH
Q 046900 433 FMQKRE 438 (442)
Q Consensus 433 ~l~~~~ 438 (442)
++....
T Consensus 391 al~~~~ 396 (404)
T 1e5e_A 391 GLDALL 396 (404)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887543
No 102
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=3.6e-32 Score=266.89 Aligned_cols=300 Identities=15% Similarity=0.134 Sum_probs=226.7
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCC-cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH--HhHhhhcCcEEEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLN-RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD--RDLRWRTGIKIVP 171 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~-~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~~G~~v~~ 171 (442)
.+..++|+.++++++ ++++ +|++|+|+++++.+++.+++++||.|+++.|+|+.+. ..++ ..|++++.
T Consensus 52 ~~~~~l~~~la~~~g--------~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~ 122 (393)
T 2huf_A 52 KIMDDIKEGVRYLFQ--------TNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDRSADMAT-RYGADVRV 122 (393)
T ss_dssp HHHHHHHHHHHHHHT--------CCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHH-HTTCEEEE
T ss_pred HHHHHHHHHHHHHhC--------CCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHH-HcCCeeEE
Confidence 456788888888775 4565 8999999999999999999999999999999998742 3344 37999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
+++++ ++.+|++.|++.+++. ++++|++++|+||||.+++ +++|+++|+++|+++|+||+++. +..
T Consensus 123 v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~~---~~~- 188 (393)
T 2huf_A 123 VKSKV--GQSLSLDEIRDALLIH-----KPSVLFLTQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVASL---GGA- 188 (393)
T ss_dssp EECCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTB---TTB-
T ss_pred EeCCC--CCCCCHHHHHHHHhcc-----CCcEEEEEccCCCccccCC---HHHHHHHHHHcCCEEEEEccccc---CCC-
Confidence 99875 3568999999999752 5789999999999999999 77889999999999999999863 221
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCccc-CCCCCceeEEEeecCHHHHHHHHHcc----c--------------------
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKD-LGLPGFRVGTIYSYNDKVVTTARRMS----S-------------------- 306 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~-~g~~G~RiG~i~~~~~~~~~~~~~~~----~-------------------- 306 (442)
...+. . .+..+++.|+||. +|++|+ ||+++ ++.+.+.++... .
T Consensus 189 ~~~~~---~------~~~d~~~~s~sK~l~g~~G~--G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (393)
T 2huf_A 189 PMFMD---R------WEIDAMYTGSQKVLGAPPGI--TPVSF-SHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRI 256 (393)
T ss_dssp CCCTT---T------TTCSEEECCSSSTTCCCSSC--EEEEE-CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCC
T ss_pred Ccchh---h------cCccEEEECCCcccccCCCe--EEEEE-CHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCC
Confidence 11111 1 2456888999997 556776 99999 466666665431 1
Q ss_pred -cCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC---ceEEEEEecCCcccccChhhH
Q 046900 307 -FTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN---AGLFCWMNLSPLLEEQTREGE 382 (442)
Q Consensus 307 -~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~ 382 (442)
.+..+...+.++.++++... +..+++.+++++++++++.+.|++.|+++..+. +++++|+.++... +.
T Consensus 257 ~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~ 328 (393)
T 2huf_A 257 YHHTISSTLLYGLREAIAMAC--EEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQGV------DW 328 (393)
T ss_dssp CSCCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEECCTTC------CH
T ss_pred CCCCCCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEEcCCCC------CH
Confidence 02334555555555554211 123667788899999999999998888877653 3558888886422 25
Q ss_pred HHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEe-e-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 383 LALWDSMLHEVKLNISPGSSCHCSEPGWFRVCF-A-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 383 ~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~-~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.++++.|++++||.+.+|..|. .++++||++ + ..+++++++++++|++++++.+.
T Consensus 329 ~~~~~~L~~~~gi~v~~g~~~~--~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 329 LKAAQYAMKTYLVEISGGLGPT--AGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp HHHHHHHHHHHCEECBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCEEEecCcccc--cCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 6788888776699999998763 357999999 5 23688899999999999987654
No 103
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=3e-32 Score=269.07 Aligned_cols=295 Identities=13% Similarity=0.120 Sum_probs=216.8
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
....++++.++++++ .+..++++++++++..++.+++++||.|+++.|+|+.+...+.. .|++++.++.
T Consensus 104 ~~~~~l~~~la~~~g----------~~~~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~~~~~ 172 (409)
T 3kki_A 104 YDKPMIEKRLAKFTG----------FDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARY-ANAQAHPFMH 172 (409)
T ss_dssp TTSCHHHHHHHHHHT----------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHH-TTCEEEEECT
T ss_pred HHHHHHHHHHHHHhC----------CCeEEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHH-cCCeEEEecC
Confidence 345677777777764 22344555557999999999999999999999999999998885 8999988864
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s 254 (442)
.|+++|++.+++. ++++|++++|+||||.+++ +++|+++|++||++||+||+|+.+.++... ..
T Consensus 173 -------~d~~~le~~l~~~-----~~~~vi~~~~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g-~~ 236 (409)
T 3kki_A 173 -------NNCDHLRMLIQRH-----GPGIIVVDSIYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNG-AG 236 (409)
T ss_dssp -------TCHHHHHHHHHHH-----CSCEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGG-CC
T ss_pred -------CCHHHHHHHHHhc-----CCeEEEECCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCC-Cc
Confidence 5899999999863 4689999999999999999 888999999999999999999986553221 12
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc----cCCCcHHHHHHHHHHhcCchhHHH
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS----FTLISSQTQYLLASMLSNKKFTEN 330 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~----~~~~s~~~q~~~~~~l~~~~~~~~ 330 (442)
......- ..+..+++.|+||++|.+ .||++++++ +.+.+..... ....+++.+.++.+.++. .++
T Consensus 237 ~~~~~~~----~~~~di~~~s~sK~~~~~---gg~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~---~~~ 305 (409)
T 3kki_A 237 LLAELGL----TREVHFMTASLAKTFAYR---AGAIWCNNE-VNRCVPFISYPAIFSSTLLPYEAAGLETTLEI---IES 305 (409)
T ss_dssp HHHHHTC----GGGCSEEEEESSSTTCSS---CEEEEESSS-GGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHH---HHH
T ss_pred chhhcCC----CCCCCEEEeecchhhCCC---ceEEEECHH-HHHHHHHhCcCccccCCCcHHHHHHHHHHHHH---Hhc
Confidence 2222110 013458899999999855 499999544 4444333211 123455555555555542 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCC-CCCCC
Q 046900 331 YIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCH-CSEPG 409 (442)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~-~~~~~ 409 (442)
.++.++.++++++++.+.|++.|+++. ..++++|+.++... +..++++.|+++ ||.+.|+..+. ..+.+
T Consensus 306 -~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~------~~~~~~~~L~~~-Gv~v~~~~~~~~~~~~~ 375 (409)
T 3kki_A 306 -ADNRRQHLDRMARKLRIGLSQLGLTIR--SESQIIGLETGDER------NTEKVRDYLESN-GVFGSVFCRPATSKNKN 375 (409)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHTTTCCCC--CSSSEEEEEEESHH------HHHHHHHHHHHT-TEECEEECTTSSCTTCE
T ss_pred -CHHHHHHHHHHHHHHHHHHHHcCCccC--CCCCEEEEEeCCHH------HHHHHHHHHHHC-CceEeeeCCCCcCCCCc
Confidence 256788899999999999999888765 35668888876531 356788888888 99998865432 23457
Q ss_pred EEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 410 WFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 410 ~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
++||+++ ..+++++++++++|+++++..
T Consensus 376 ~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 376 IIRLSLNSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence 9999997 338999999999999998753
No 104
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=9.4e-33 Score=266.74 Aligned_cols=293 Identities=13% Similarity=0.055 Sum_probs=221.1
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH--HhHhhhcCcEEEEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD--RDLRWRTGIKIVPI 172 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~~G~~v~~v 172 (442)
.+..++|++++++++ +++++|++|+|+++++..++.+++++||.|+++.|+|+.+. ..+. ..|++++.+
T Consensus 34 ~~~~~l~~~la~~~g--------~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~v 104 (352)
T 1iug_A 34 EVFLKARGLLREAFR--------TEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSERFYEIAL-EAGLVVERL 104 (352)
T ss_dssp HHHHHHHHHHHHHHT--------CSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHH-HTTCEEEEE
T ss_pred HHHHHHHHHHHHHhC--------CCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHHHHHHHH-HcCCceEEE
Confidence 456888899988875 45789999999999999999999999999999999998865 3344 379999999
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc--CcEEEEeccCCcCCCCCC
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK--NIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~--~~~vi~De~y~~~~~~~~ 250 (442)
+++.+ +.+|+++|++ + ++++|++++|+||||.+++ +++|.++|+++ |++||+||+|+. +..
T Consensus 105 ~~~~~--~~~d~~~l~~---~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~---~~~ 167 (352)
T 1iug_A 105 DYPYG--DTPRPEDVAK---E------GYAGLLLVHSETSTGALAD---LPALARAFKEKNPEGLVGADMVTSL---LVG 167 (352)
T ss_dssp ECCTT--CCCCTTTSCC---S------SCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTCEEEEECTTTB---TTB
T ss_pred eCCCC--CCCCHHHHhc---c------CCcEEEEEEecCCcceecC---HHHHHHHHHhhCCCCEEEEECCccc---cCc
Confidence 98753 4578888776 2 7889999999999999999 67888999999 999999999973 221
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHH-------------HH---HccccCCCcHHH
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTT-------------AR---RMSSFTLISSQT 314 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~-------------~~---~~~~~~~~s~~~ 314 (442)
+ ..+.. .+..+++.|+||.++ .+.++||+++++ .+.+. .. .....+..+...
T Consensus 168 ~-~~~~~---------~~~d~~~~s~~K~~~-~~~g~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (352)
T 1iug_A 168 E-VALEA---------MGVDAAASGSQKGLM-CPPGLGFVALSP-RALERLKPRGYYLDLARELKAQKEGESAWTPAINL 235 (352)
T ss_dssp C-CCSGG---------GTCSEEEEESSSTTC-CCSCEEEEEECH-HHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHH
T ss_pred c-eeccc---------cCeeEEEecCccccc-CCCceeEEEECH-HHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHH
Confidence 1 11111 134577899999543 223479999954 43322 11 112235556677
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC-ceEEEEEecCCcccccChhhHHHHHHHHHHcC
Q 046900 315 QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN-AGLFCWMNLSPLLEEQTREGELALWDSMLHEV 393 (442)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 393 (442)
+.++.++++.. .+++++.+++++++++++.+.|++.|+++..+. .++++|++++... +..++++.|.++
T Consensus 236 ~~a~~~al~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~- 305 (352)
T 1iug_A 236 VLAVAAVLEEV---LPRLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGV------PYARVKEAFAQR- 305 (352)
T ss_dssp HHHHHHHHHHH---GGGHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTC------CHHHHHHHHHTT-
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCCCC------CHHHHHHHHHHC-
Confidence 77666666531 223667888899999999999998888887764 6678999987422 256788888776
Q ss_pred cEEEeCCCCCCCCCCCEEEEEeecC-CHHHHHHHHHHHHHHHHHH
Q 046900 394 KLNISPGSSCHCSEPGWFRVCFANM-SEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 394 gi~v~pg~~f~~~~~~~iRls~~~~-~~e~i~~~l~~l~~~l~~~ 437 (442)
||.+.||..+ ..++++||+++.. +++++++++++|++++++.
T Consensus 306 gi~v~~~~~~--~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 306 GAVIAGGQGP--LKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp TEECEECCGG--GTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCc--cCCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 9999998743 2457999999832 6899999999999998765
No 105
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=1.6e-32 Score=267.82 Aligned_cols=298 Identities=15% Similarity=0.139 Sum_probs=217.1
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc----CCCCeEEEcCCCCcChHHhHhh--hcCcEEEE
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA----DPGDALLVPTPYYPGFDRDLRW--RTGIKIVP 171 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~ 171 (442)
.++.+.+.+++.+.++ +++++|++|+|+++++.+++.++. ++||.|+++.|+|+.+...+.. ..|++++.
T Consensus 42 ~~~~~~~~~~la~~~~----~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~ 117 (382)
T 4hvk_A 42 REAVQEAREKVAKLVN----GGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEY 117 (382)
T ss_dssp HHHHHHHHHHHHHHTT----CTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHcC----CCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEE
Confidence 4444444454444444 567899999999999999999998 8999999999999988775542 25999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
+++++ ++.+|+++|++.+++ +++++++++|+||||.+++ +++|+++|++||+ ||+|++|+... .
T Consensus 118 v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~D~a~~~~~----~ 181 (382)
T 4hvk_A 118 IPVGK--YGEVDVSFIDQKLRD------DTILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHIDATASVGQ----I 181 (382)
T ss_dssp ECBCT--TSCBCHHHHHHHCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEEECTTTBTT----B
T ss_pred eccCC--CCCcCHHHHHHHhcc------CceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEEEhHHhcCC----C
Confidence 99875 457899999998864 7899999999999999999 6788899999999 99999987422 1
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc---------cccCCCcHHHHHHHHHHh
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM---------SSFTLISSQTQYLLASML 322 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~---------~~~~~~s~~~q~~~~~~l 322 (442)
..+.... +..+++.|+||.+|.+| +|+++++++. .+... ...+..+...+.++.+.+
T Consensus 182 ~~~~~~~---------~~d~~~~s~~K~~g~~g--~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 247 (382)
T 4hvk_A 182 EVDVEKI---------GADMLTISSNDIYGPKG--VGALWIRKEA---KLQPVILGGGQENGLRSGSENVPSIVGFGKAA 247 (382)
T ss_dssp CCCHHHH---------TCSEEEEESGGGTSCTT--CEEEEEETTC---CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHH
T ss_pred CCCchhc---------CCCEEEEeHHHhcCCCc--eEEEEEcCcc---CcCcccccCCCcCccccCCcCHHHHHHHHHHH
Confidence 2233222 34588999999887666 6777764432 11111 112334556666665555
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc---eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEe
Q 046900 323 SNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNA---GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNIS 398 (442)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~ 398 (442)
. +..+++++.++.++++++++.+.|++. |+++..+.+ +.++++.++.. +..++.+.|.++ ||.+.
T Consensus 248 ~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~-gi~v~ 316 (382)
T 4hvk_A 248 E---ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI-------EGESIVLSLDMA-GIQAS 316 (382)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTC-------CHHHHHHHHHHT-TCBCB
T ss_pred H---HHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCC-------CHHHHHHHHHHC-CEEEe
Confidence 4 334567888999999999999999986 777766543 23566666532 256778887666 99999
Q ss_pred CCCCCCCCC-----------------CCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 399 PGSSCHCSE-----------------PGWFRVCFA-NMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 399 pg~~f~~~~-----------------~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
+|..|.... ++++||+++ ..+++++++++++|++++++.++.
T Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4hvk_A 317 TGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp CC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 998776432 578999998 337899999999999999887653
No 106
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=1.9e-32 Score=265.84 Aligned_cols=298 Identities=14% Similarity=0.163 Sum_probs=224.8
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcC-CCCcC-hHHhHhhhcCcEEEEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPT-PYYPG-FDRDLRWRTGIKIVPI 172 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~-p~y~~-~~~~~~~~~G~~v~~v 172 (442)
.+..++|++++++++ .+.++++|++|+|+++++.+++.+++++||.|++.+ ++|+. +...+. ..|++++.+
T Consensus 37 ~~~~~l~~~la~~~g------~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~-~~g~~~~~v 109 (366)
T 1m32_A 37 GVVEQIRQQLTALAT------ASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAG-LMGIAHHAY 109 (366)
T ss_dssp TTHHHHHHHHHHHHC------SSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHHHHHHH-HHTCCEEEE
T ss_pred HHHHHHHHHHHHHhC------CCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHH-HhCCceEEE
Confidence 578999999999985 112356899999999999999999999999988776 55654 555666 489999999
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
+++. .+.+|++.|++.+++. .++++|++++|+||||.+++ +++|+++|++||+++|+||+|+.... .
T Consensus 110 ~~~~--~~~~d~~~l~~~l~~~----~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~ 176 (366)
T 1m32_A 110 DCGE--VARPDVQAIDAILNAD----PTISHIAMVHSETTTGMLNP---IDEVGALAHRYGKTYIVDAMSSFGGI----P 176 (366)
T ss_dssp ECCT--TSCCCHHHHHHHHHHC----TTCCEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTTTTS----C
T ss_pred eCCC--CCCCCHHHHHHHHhcC----CCeEEEEEecccCCcceecC---HHHHHHHHHHcCCEEEEECCccccCc----C
Confidence 9865 4568999999999751 24788999999999999999 77889999999999999999985322 1
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc------------------c--cCCCcH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS------------------S--FTLISS 312 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~------------------~--~~~~s~ 312 (442)
.++. . .+..+++.|+||.++ .+.++||++++ +.+.+.+.... . .+..+.
T Consensus 177 ~~~~---~------~~~di~~~s~~K~~~-~~~g~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (366)
T 1m32_A 177 MDIA---A------LHIDYLISSANKCIQ-GVPGFAFVIAR-EQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPT 245 (366)
T ss_dssp CCTT---T------TTCSEEEEESSSTTC-CCSSEEEEEEE-HHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCH
T ss_pred cccc---c------cCccEEEecCccccc-CCCceEEEEEC-HHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCH
Confidence 1111 1 235588999999874 33457999995 44443332210 0 134566
Q ss_pred HHHHHHHHHhcCchhHHHH--HHHHHHHHHHHHHHHHHHHHhCCCeeecC---CceEEEEEecCC--cccccChhhHHHH
Q 046900 313 QTQYLLASMLSNKKFTENY--IKTNRERLQKRYQMIIEGLRSAGIECLKG---NAGLFCWMNLSP--LLEEQTREGELAL 385 (442)
Q Consensus 313 ~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~g~~~~~~~~~--~~~~~~~~~~~~l 385 (442)
+.+.++.+.++. ..++ +++.+++++++++++.+.|++.|+++..+ .+++++|+.++. .. +..++
T Consensus 246 ~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 316 (366)
T 1m32_A 246 HTVLAFAQALKE---LAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQY------RFSEF 316 (366)
T ss_dssp HHHHHHHHHHHH---HHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTC------CHHHH
T ss_pred HHHHHHHHHHHH---HHHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCccCCC------CHHHH
Confidence 666666666653 2333 56788889999999999999888877654 467799999874 21 25678
Q ss_pred HHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecC-CHHHHHHHHHHHHHHHHH
Q 046900 386 WDSMLHEVKLNISPGSSCHCSEPGWFRVCFANM-SEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 386 ~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~-~~e~i~~~l~~l~~~l~~ 436 (442)
.+.|.++ ||.+.||..| .++++|++++.. +++++++++++|++++++
T Consensus 317 ~~~l~~~-gi~v~~~~~~---~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 317 YRRLKEQ-GFVIYPGKVS---QSDCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp HHHHHHT-TEECEECCCS---SSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHC-CEEEECCcCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 8888777 9999999877 357899999842 789999999999988653
No 107
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=9.5e-32 Score=262.73 Aligned_cols=295 Identities=16% Similarity=0.194 Sum_probs=223.9
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCC--CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDL--NRIVVTAGATAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~--~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~ 171 (442)
...++++.++++++ +++ ++|++|+|+++++. ++.+++++||.|+++.|+|.. +...+. ..|++++.
T Consensus 36 ~~~~~~~~la~~~~--------~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~~~~~~~~-~~g~~~~~ 105 (384)
T 3zrp_A 36 ALAYSLKGLRYVMG--------ASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGDRWEQIFK-RYPVNVKV 105 (384)
T ss_dssp HHHHHHHHHHHHHT--------CCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHHHHHHHHT-TSSCEEEE
T ss_pred HHHHHHHHHHHHhC--------CCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchHHHHHHHH-HcCCcEEE
Confidence 44566666666654 445 88999999999999 999999999999999999965 555556 48999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++++. ++.+|++.|++.+++. ++++|++++|+||||.+++ +++|.++|++||+++|+|++|+....
T Consensus 106 v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~---- 171 (384)
T 3zrp_A 106 LRPSP--GDYVKPGEVEEEVRKS-----EYKLVALTHVETSTGVREP---VKDVINKIRKYVELIVVDGVSSVGAE---- 171 (384)
T ss_dssp ECCST--TCCCCHHHHHHHHHHS-----CEEEEEEESEETTTTEECC---HHHHHHHHGGGEEEEEEECTTTTTTS----
T ss_pred ecCCC--CCCCCHHHHHHHHHhC-----CCcEEEEeCCCCCCceECc---HHHHHHHHHhcCCEEEEECcccccCc----
Confidence 99876 3568999999999862 6899999999999999999 77889999999999999999984322
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHH-------------HH-----------cccc
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTA-------------RR-----------MSSF 307 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~-------------~~-----------~~~~ 307 (442)
..++. ..+..+++.|+||.++ .+.++||++++ +.+.+.+ .. ....
T Consensus 172 ~~~~~---------~~~~d~~~~s~~K~~~-~~~g~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (384)
T 3zrp_A 172 EVKAE---------EWNVDVYLTASQKALG-SAAGLGLLLLS-PKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAY 240 (384)
T ss_dssp CCCTT---------TTTCSEEEEETTSTTC-CCSSEEEEEEC-HHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCC
T ss_pred ccccc---------ccCCCEEEecCccccc-CCCceEEEEEC-HHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCc
Confidence 11111 1245688999999885 34558999994 4444433 11 1111
Q ss_pred -CCCcHHHHHHHHHHhcCchhHHH-HHHHHHHHHHHHHHHHHHHHHhCCCeeecCC----ceEEEEEecCCcccccChhh
Q 046900 308 -TLISSQTQYLLASMLSNKKFTEN-YIKTNRERLQKRYQMIIEGLRSAGIECLKGN----AGLFCWMNLSPLLEEQTREG 381 (442)
Q Consensus 308 -~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~ 381 (442)
+..+...+.++.+.+.. ..+ .+++.+++++++++++.+.|++.|+++..+. +++++|+.++. . +
T Consensus 241 ~g~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~------~ 310 (384)
T 3zrp_A 241 FATPPVHVILQLAEAFRL---IEKEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKV-A------D 310 (384)
T ss_dssp SSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSS-S------C
T ss_pred CCCCCHHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCC-C------C
Confidence 24455555555555542 222 3678888999999999999998888887766 56788888876 2 2
Q ss_pred HHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 382 ELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 382 ~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
..++.+.|.++ ||.+.+|..+.. +++||++. ..+++++++++++|++++++.+.
T Consensus 311 ~~~~~~~l~~~-gi~v~~g~~~~~---~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~ 365 (384)
T 3zrp_A 311 PQKVLAGTVNE-GVEFAPGVHPAF---KYFRIGHMGWVTPNDAIIAISVIERTLRKLGE 365 (384)
T ss_dssp HHHHHHHHHTT-TCCCEECCCTTC---CEEEEECCSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHC-CEEEecCCCCCc---CEEEEeccccCCHHHHHHHHHHHHHHHHHcCC
Confidence 67888888777 999999875432 89999987 33899999999999999988654
No 108
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=1e-32 Score=273.78 Aligned_cols=350 Identities=11% Similarity=0.093 Sum_probs=232.7
Q ss_pred CCCceeeeecccc--cc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 46 NPSGVIQMGLAEN--QV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 46 ~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
....+|||+.+.+ ++ +++.+.+.+.+...... .....|.+..+..+||++|++++. + . .++
T Consensus 39 ~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~--------~~~~~~~~~~~~~~l~~~la~~~~-----~-~-~~~ 103 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS--------HTCFQVLAYEPYLELCEIMNQKVP-----G-D-FAK 103 (426)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCS--------CCCTTTEECHHHHHHHHHHHHHSS-----C-S-SCE
T ss_pred CCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCC--------CccccccCCHHHHHHHHHHHHhCC-----c-c-ccc
Confidence 3456889988765 33 34555555554432110 011235556788999999999973 1 1 358
Q ss_pred cEEEecChHHHHHHHHH---hhcCCCCeEEEcCCCCcChHH-hHhhhcCcE-------------EEEEecCC---CCCCc
Q 046900 122 RIVVTAGATAANELLTF---ILADPGDALLVPTPYYPGFDR-DLRWRTGIK-------------IVPIHCDS---SNNFQ 181 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~---~l~~~gd~Vl~~~p~y~~~~~-~~~~~~G~~-------------v~~v~~~~---~~~~~ 181 (442)
+|++|+|+++++.++++ ++.++| .|++++|+|+.+.. .+.. .|.+ ++.++++. ..++.
T Consensus 104 ~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~-~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~ 181 (426)
T 1sff_A 104 KTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLAL-TGKVNPYSAGMGLMPGHVYRALYPCPLHGISED 181 (426)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHH-SSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHH
T ss_pred EEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhh-cCCccccccccCCCCCCcEEeCCCccccccchH
Confidence 99999999999999988 677776 89999999987654 4442 5543 66677642 12345
Q ss_pred CCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCC-cCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHH
Q 046900 182 ITPQALEAAYKEAESKDMRVRGVLIT-NPSNPLG-ATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEIL 259 (442)
Q Consensus 182 ~d~~~l~~~l~~~~~~~~~~~~v~l~-~P~NPtG-~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~ 259 (442)
+|++.|++.+++.. .+.++++|+++ +|+| || .+++.+++++|+++|++||++||+||+|+++.+.+..+ ++ .
T Consensus 182 ~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~---~ 255 (426)
T 1sff_A 182 DAIASIHRIFKNDA-APEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AM---E 255 (426)
T ss_dssp HHHHHHHHHHHHTC-CGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GG---G
T ss_pred HHHHHHHHHHHhcc-CCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hh---h
Confidence 78999999887410 01256666553 4577 99 78899999999999999999999999999876655321 11 1
Q ss_pred hhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHH
Q 046900 260 EARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRE 337 (442)
Q Consensus 260 ~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 337 (442)
. .+..+.+.||||.+|. |+|+||++++ +.+.+.+.. ....+..++++|.++.+.++... + ....+
T Consensus 256 ~------~~~~~di~s~sK~~~~-GlriG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~---~--~~~~~ 322 (426)
T 1sff_A 256 Q------MGVAPDLTTFAKSIAG-GFPLAGVTGR-AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFE---Q--ENLLQ 322 (426)
T ss_dssp G------TTSCCSEEEECGGGGT-SSCCEEEEEE-HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHH---H--TTHHH
T ss_pred h------cCCCCCEEEEcccccC-CCceEEEEEc-HHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHH---h--cCHHH
Confidence 1 1222334599999995 9999999995 555554442 22335568888888886665211 1 11233
Q ss_pred HHHHHHHHHHHHHHh----CC-CeeecCCceEEEEEecCCcccc--cChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCE
Q 046900 338 RLQKRYQMIIEGLRS----AG-IECLKGNAGLFCWMNLSPLLEE--QTREGELALWDSMLHEVKLNISPGSSCHCSEPGW 410 (442)
Q Consensus 338 ~~~~~~~~l~~~L~~----~g-~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~ 410 (442)
.++++++++.+.|++ .. +....+. |+|+|++++..... ....+..++++.|+++ ||.+.||..| +++
T Consensus 323 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~~~~----~~~ 396 (426)
T 1sff_A 323 KANDLGQKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARARDK-GLILLSCGPY----YNV 396 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEEEEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHT-TEECEEESTT----SCE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHHHC-CcEEecCCCC----CCE
Confidence 344444555555443 22 2333445 66899998531100 0112467788888776 9999998764 478
Q ss_pred EEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 411 FRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 411 iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+||+++ ..+++++++++++|++++++.
T Consensus 397 iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 397 LRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 999986 448999999999999998765
No 109
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=2.4e-31 Score=262.41 Aligned_cols=299 Identities=14% Similarity=0.107 Sum_probs=224.3
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCc-EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEEEecC
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNR-IVVTAGATAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVPIHCD 175 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~-i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~v~~~ 175 (442)
++.+.+.+++.+.++ .+.++ |++++|+++++..++.+++++||.|+++.|+|.+ +...++. .|++++.+|++
T Consensus 46 ~~~~~~~~~la~~~~----~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~-~g~~~~~v~~~ 120 (411)
T 3nnk_A 46 HYMNEVMALYRGVFR----TENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARR-CRAEVHTIEVP 120 (411)
T ss_dssp HHHHHHHHHHHHHHT----CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHH-TTCEEEEEECC
T ss_pred HHHHHHHHHHHHHhC----CCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHH-cCCeEEEEecC
Confidence 444444444444443 34554 8888999999999999999999999999999977 7777774 89999999986
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccH
Q 046900 176 SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSI 255 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~ 255 (442)
. ++.+|+++|++++++. ++++|++++|+||||.+++ +++|+++|++||+++|+||+++.... ....
T Consensus 121 ~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~ 186 (411)
T 3nnk_A 121 W--GEVFTPDQVEDAVKRI-----RPRLLLTVQGDTSTTMLQP---LAELGEICRRYDALFYTDATASLGGN----PLET 186 (411)
T ss_dssp T--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTTBTTB----CCCT
T ss_pred C--CCCCCHHHHHHHHhhC-----CCeEEEEeCCCCCcceecc---HHHHHHHHHHcCCEEEEECCcccCCc----ccch
Confidence 4 4578999999999753 7889999999999999998 77888999999999999999874221 1111
Q ss_pred HHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc------------------------------
Q 046900 256 AEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS------------------------------ 305 (442)
Q Consensus 256 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~------------------------------ 305 (442)
. ..+..+++.|+||.++ .+.++||+++ ++.+.+.++...
T Consensus 187 ~---------~~~~d~~~~s~~K~l~-~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~ 255 (411)
T 3nnk_A 187 D---------VWGLDAVSAGMQKCLG-GPSGTSPITL-SARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVM 255 (411)
T ss_dssp T---------TTTCSEEECCSTTTTC-CCSSEEEEEE-CHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHH
T ss_pred h---------ccCCcEEEecCccccC-CCCceEEEEE-CHHHHHHHhhcccccccccccccccccCCCCcccccchHHHH
Confidence 1 1245588999999854 4456899999 556666555432
Q ss_pred --------ccCCCcHHHHHHHHHHhcCchhHHHH-HHHHHHHHHHHHHHHHHHHHhCCCeeecCCc---eEEEEEecCCc
Q 046900 306 --------SFTLISSQTQYLLASMLSNKKFTENY-IKTNRERLQKRYQMIIEGLRSAGIECLKGNA---GLFCWMNLSPL 373 (442)
Q Consensus 306 --------~~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---g~~~~~~~~~~ 373 (442)
..+..+...+.++.+.++. ..++ +++.+++++++++++.+.|++.|+++..+.+ +.++|+.++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 332 (411)
T 3nnk_A 256 DYWGPERLNHHTEATTALFGARECARL---ILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIPQG 332 (411)
T ss_dssp HHHSTTCCCCSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECCTT
T ss_pred hhhccccCCCCCCCHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECCCC
Confidence 1134455666666555542 2333 6788889999999999999998888776553 67888888753
Q ss_pred ccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEe-e-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 374 LEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCF-A-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 374 ~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~-~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
. +..++.+.|++++||.+.||.. ...++++||++ + ..+++++++++++|++++++..
T Consensus 333 ~------~~~~l~~~l~~~~gi~v~~g~~--~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 333 I------NGDQARKLMLEDFGIEIGTSFG--PLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp C------CHHHHHHHHHHHHSEEEEECCG--GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred C------CHHHHHHHHHHhcCeEEeCccC--CCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 2 2668888888777999999843 23457999998 5 2278999999999999998754
No 110
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=9.7e-32 Score=259.50 Aligned_cols=294 Identities=13% Similarity=0.081 Sum_probs=220.6
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcCh--HHhHhhhcCcEEEEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGF--DRDLRWRTGIKIVPI 172 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~~G~~v~~v 172 (442)
.+..++|+.++++++ .+.++++|++|+|+++++.+++.++++ |.|++++|+|+.+ ...++ ..|++++.+
T Consensus 33 ~~~~~l~~~la~~~g------~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~~~~~~~~-~~g~~~~~v 103 (353)
T 2yrr_A 33 RVNRAIQERLAALFD------PGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQRVAEMAA-LHGLDPEVL 103 (353)
T ss_dssp HHHHHHHHHHHHHHC------CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHHHHHHHHH-HTTCCEEEE
T ss_pred HHHHHHHHHHHHHhC------CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchHHHHHHHH-HcCCceEEE
Confidence 356788888888774 223478899999999999999999876 8999999998875 34455 389999999
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCc
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEF 252 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~ 252 (442)
++++ ++.+|++.|++.+++. ++++|++++|+||||.+++ +++|.++|++||++||+||+|+. +.. .
T Consensus 104 ~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~D~a~~~---~~~-~ 169 (353)
T 2yrr_A 104 DFPP--GEPVDPEAVARALKRR-----RYRMVALVHGETSTGVLNP---AEAIGALAKEAGALFFLDAVTTL---GML-P 169 (353)
T ss_dssp ECCT--TSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTT---TTS-C
T ss_pred eCCC--CCCCCHHHHHHHHHhC-----CCCEEEEEccCCCcceecC---HHHHHHHHHHcCCeEEEEcCccc---ccc-c
Confidence 9875 3568999999998752 5789999999999999999 67888999999999999999963 222 2
Q ss_pred ccHHHHHhhhcCCCCCcEEEEecCcccC-CCCCceeEEEeecCHHHHHHHH-----------------HccccCCCcHHH
Q 046900 253 VSIAEILEARQYKDSERVHIVYSLSKDL-GLPGFRVGTIYSYNDKVVTTAR-----------------RMSSFTLISSQT 314 (442)
Q Consensus 253 ~s~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~G~RiG~i~~~~~~~~~~~~-----------------~~~~~~~~s~~~ 314 (442)
.++..+ +..+++.|++|.+ |.+| +||++++ +.+.+.++ .....+..+...
T Consensus 170 ~~~~~~---------~~d~~~~s~~K~~~~~~g--~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
T 2yrr_A 170 FSMRAM---------GVDYAFTGSQKCLSAPPG--LAPIAAS-LEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLL 237 (353)
T ss_dssp CCHHHH---------TCSEEECCTTSTTCCCSS--CEEEEEC-HHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHH
T ss_pred cccccc---------CceEEEecCcccccCCCc--eEEEEEC-HHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHH
Confidence 233332 2236788999965 4456 7999995 44444332 111224456666
Q ss_pred HHHHHHHhcCchhHHHH-HHHHHHHHHHHHHHHHHHHHhCCCeeecCC--ceEEEEEecCCcccccChhhHHHHHHHHHH
Q 046900 315 QYLLASMLSNKKFTENY-IKTNRERLQKRYQMIIEGLRSAGIECLKGN--AGLFCWMNLSPLLEEQTREGELALWDSMLH 391 (442)
Q Consensus 315 q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 391 (442)
+.++.+.++. ..+. +++.+++++++++++.+.|++.|+++..+. +++++|++++... +..++.+.|.+
T Consensus 238 ~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~ 308 (353)
T 2yrr_A 238 HYALLEALDL---VLEEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGV------DADRLVRALYA 308 (353)
T ss_dssp HHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTC------CHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCCCC------CHHHHHHHHHH
Confidence 6666666542 2222 667888999999999999988888877654 6777788886422 25678888877
Q ss_pred cCcEEEeCCCCCCCCCCCEEEEEe-ecCCHHHHH-HHHHHHHHHHH
Q 046900 392 EVKLNISPGSSCHCSEPGWFRVCF-ANMSEQTLE-VALKRIHNFMQ 435 (442)
Q Consensus 392 ~~gi~v~pg~~f~~~~~~~iRls~-~~~~~e~i~-~~l~~l~~~l~ 435 (442)
+ ||.+.||..|. .++++|+++ ...++++++ +++++|+++++
T Consensus 309 ~-gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 309 E-GVAVAGGIGPT--RGQVLRLGLMGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp T-TEECEECCGGG--TTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred C-CEEEeCCcccc--CCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 7 99999998764 357899999 333778888 99999998875
No 111
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=2.8e-32 Score=270.40 Aligned_cols=345 Identities=15% Similarity=0.156 Sum_probs=236.7
Q ss_pred CCCceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCC-CcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 46 NPSGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGF-RENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
...++|.|+.+.+..+++.+.+.+.+....... .+.... .....|.......++++.++++++ +++++|+
T Consensus 19 ~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--------~~~~~v~ 89 (423)
T 3lvm_A 19 AMKLPIYLDYSATTPVDPRVAEKMMQFMTMDGT-FGNPASRSHRFGWQAEEAVDIARNQIADLVG--------ADPREIV 89 (423)
T ss_dssp -CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSC-CSCTTCTTSHHHHHHHHHHHHHHHHHHHHHT--------CCGGGEE
T ss_pred ccCCCEeecCCCcCCCCHHHHHHHHHHHhhccc-ccCCCccccchhHHHHHHHHHHHHHHHHHcC--------CCCCeEE
Confidence 345667777766655556666666655430000 000000 000011112234566666666654 5688999
Q ss_pred EecChHHHHHHHHHhhcC----CCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 125 VTAGATAANELLTFILAD----PGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~----~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
+|+|+++++.+++.++.+ +||.|+++.|+|+.+...+.. ..|++++.+++++ ++.+|++.|++++++
T Consensus 90 ~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~----- 162 (423)
T 3lvm_A 90 FTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRD----- 162 (423)
T ss_dssp EESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCT-----
T ss_pred EeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCC-----
Confidence 999999999999998874 799999999999998776632 2599999999876 467899999998864
Q ss_pred CceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcc
Q 046900 199 MRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSK 278 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK 278 (442)
+++++++++|+||||.+++ +++|+++|+++|++||+||+|+...+ ..... ..+..+++.|+||
T Consensus 163 -~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~---------~~~~di~~~s~sK 225 (423)
T 3lvm_A 163 -DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL----PIDLS---------QLKVDLMSFSGHK 225 (423)
T ss_dssp -TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTT---------TSCCSEEEEESTT
T ss_pred -CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CcChh---------hcCCCEEEechHH
Confidence 7899999999999999999 77788999999999999999875221 11111 1245588999999
Q ss_pred cCCCCCceeEEEeecCHHHHHHHHHc---------cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Q 046900 279 DLGLPGFRVGTIYSYNDKVVTTARRM---------SSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEG 349 (442)
Q Consensus 279 ~~g~~G~RiG~i~~~~~~~~~~~~~~---------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 349 (442)
.+|.+| +||++++++. ...+... ...+..+...+.++...+. ...+++++.+++++++++++.+.
T Consensus 226 ~~g~~g--~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~---~~~~~~~~~~~~~~~~~~~l~~~ 299 (423)
T 3lvm_A 226 IYGPKG--IGALYVRRKP-RVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYR---IAKEEMATEMERLRGLRNRLWNG 299 (423)
T ss_dssp TTSCSS--CEEEEECBTT-BCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCC--eEEEEEeccc-cCCCCccccCCcccccccCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 888666 8999985432 2222221 1123445566666655554 23444778889999999999999
Q ss_pred HHhC-CCeeecCCc---eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCC-----------------C
Q 046900 350 LRSA-GIECLKGNA---GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSE-----------------P 408 (442)
Q Consensus 350 L~~~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~-----------------~ 408 (442)
|++. |+++..+.+ +.++++.++.. +..++.+.|.+ |.+.+|..|.... .
T Consensus 300 L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~~---i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (423)
T 3lvm_A 300 IKDIEEVYLNGDLEHGAPNILNVSFNYV-------EGESLIMALKD---LAVSSGSACTSASLEPSYVLRALGLNDELAH 369 (423)
T ss_dssp HTTSTTEEEESCSTTBCTTEEEEEETTS-------CHHHHHHHTTT---EECBCCCC-----CCCCHHHHHHTCCHHHHH
T ss_pred HhcCCCEEEeCCccccCCCeEEEEeCCC-------CHHHHHHHHhh---heeccCccccCCCccccHHHHHhCCCccccC
Confidence 9887 888776553 22444454331 25567776643 9999998765421 3
Q ss_pred CEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 409 GWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 409 ~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+++||+++ ..+++++++++++|++++++.++
T Consensus 370 ~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 370 SSIRFSLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 78999998 33789999999999999988764
No 112
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=3.8e-32 Score=267.98 Aligned_cols=340 Identities=14% Similarity=0.094 Sum_probs=234.1
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCc---chHH--HHHHHH-HHHHHHhCCCCccCCC
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYH---GLKS--FRQAMA-SFMEQIRGGRAKFDLN 121 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g~~~--lr~~ia-~~l~~~~~~~~~~~~~ 121 (442)
.++|+|+.++|+++ +.+.+.+.+..... ....|++.. |.+. ++++++ +++.+.+| ++++
T Consensus 23 ~~~i~~~~~~~~~~-~~v~~a~~~~~~~~----------~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g----~~~~ 87 (407)
T 2dkj_A 23 REGLELIASENFVS-KQVREAVGSVLTNK----------YAEGYPGARYYGGCEVIDRVESLAIERAKALFG----AAWA 87 (407)
T ss_dssp HTSEECCTTCCCCC-HHHHHHHTSGGGGC----------CCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT----CSEE
T ss_pred hcceeeccCCCCCC-HHHHHHHHhhhhcC----------cccCCCcccccCCchHHHHHHHHHHHHHHHHhC----CCcc
Confidence 46789999999984 44444444332110 123454332 4343 444333 45555544 4566
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH---HhHhhhcCc--EEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD---RDLRWRTGI--KIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~~G~--~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
+|++++|+ +++..++.+++++||.|+++.|+|+.+. ..+.. .|. ..+++++++ .++.+|++.|++.+++.
T Consensus 88 ~i~~~sGt-~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~-- 162 (407)
T 2dkj_A 88 NVQPHSGS-QANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNF-SGKLYKVVSYGVRP-DTELIDLEEVRRLALEH-- 162 (407)
T ss_dssp ECCCSSHH-HHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSH-HHHHSEEEEECCCT-TTSSCCHHHHHHHHHHH--
T ss_pred eEEecchH-HHHHHHHHHhcCCCCEEEEecccccCccchHHHHHh-cCceEEEEecCCCc-ccCccCHHHHHHHHhhc--
Confidence 67777775 5999999999999999999999999883 44443 566 444444342 35789999999999742
Q ss_pred cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc-CCCCCCCcccHHHHHhhhcCCCCCcEEEEec
Q 046900 197 KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG-SAFSSSEFVSIAEILEARQYKDSERVHIVYS 275 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~-~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S 275 (442)
++++|++++|+|| .+.+ +++|.++|++||+++|+||+|+. +.+.+.....+ ....++++|
T Consensus 163 ---~~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~-----------~~~di~~~s 223 (407)
T 2dkj_A 163 ---RPKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL-----------PYAHVVTST 223 (407)
T ss_dssp ---CCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT-----------TTCSEEEEE
T ss_pred ---CCeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCcc-----------ccccEEEEe
Confidence 6788999999998 4555 78999999999999999999987 44333221110 124578999
Q ss_pred CcccCCCCCceeEEEeecCHHHHHHHHHccccC---CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046900 276 LSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT---LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS 352 (442)
Q Consensus 276 ~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 352 (442)
+||.+ +|+|+||++++++.+.+.+......+ ..+.....++.+.+... ...++++.+++++++++++.+.|++
T Consensus 224 ~sK~l--~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~ 299 (407)
T 2dkj_A 224 THKTL--RGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEA--LQPEFKEYSRLVVENAKRLAEELAR 299 (407)
T ss_dssp SSGGG--CCCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccC--CCCCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99955 68899999996467766665543332 22333333444545421 1245678888999999999999998
Q ss_pred CCCeeec-CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCC----CCCCCCEEEEEeec-----CCHHH
Q 046900 353 AGIECLK-GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSC----HCSEPGWFRVCFAN-----MSEQT 422 (442)
Q Consensus 353 ~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f----~~~~~~~iRls~~~-----~~~e~ 422 (442)
.|+++.. +..++++|++++.... +..++.+.|.+ +||.+.+|..| +...++++|++++. .++++
T Consensus 300 ~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~ 373 (407)
T 2dkj_A 300 RGYRIVTGGTDNHLFLVDLRPKGL-----TGKEAEERLDA-VGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEE 373 (407)
T ss_dssp TTCEEGGGSCSSSEEEEECGGGTC-----CHHHHHHHHHH-TTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGG
T ss_pred CCceeecCCCCceEEEEECcccCC-----CHHHHHHHHHH-cCceecCCcCccccccccCCCceeeecccccccCCCHHH
Confidence 8888775 3567789999864110 25677777755 49999999864 22235789999962 48999
Q ss_pred HHHHHHHHHHHHHH
Q 046900 423 LEVALKRIHNFMQK 436 (442)
Q Consensus 423 i~~~l~~l~~~l~~ 436 (442)
+++++++|++++++
T Consensus 374 i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 374 MPLVAELIDRALLE 387 (407)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999887
No 113
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.2e-32 Score=265.55 Aligned_cols=294 Identities=13% Similarity=0.118 Sum_probs=217.9
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh---cCCCCeEEEcCCCCcChHHhHhh---hcCcE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL---ADPGDALLVPTPYYPGFDRDLRW---RTGIK 168 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~ 168 (442)
.+..++|++++++++ +++++|++|+|+++++.+++.++ +++||.|+++.|+|+.+...+.. ..|++
T Consensus 69 ~~~~~l~~~la~~~g--------~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~ 140 (406)
T 3cai_A 69 AVLDAAREAVADLVN--------ADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAK 140 (406)
T ss_dssp HHHHHHHHHHHHHHT--------CCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCE
T ss_pred HHHHHHHHHHHHHhC--------CCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCe
Confidence 456788888888875 56789999999999999999887 78999999999999987655442 16999
Q ss_pred EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 169 v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
++.++++++ ++.+|++.|++.+++ ++++|++++|+||||.+++ +++|.++|+++|++||+|++|+..
T Consensus 141 v~~v~~~~~-~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g--- 207 (406)
T 3cai_A 141 VKWAEVDIE-TGELPTWQWESLISK------STRLVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAP--- 207 (406)
T ss_dssp EEEECCCTT-TCCCCGGGHHHHCCT------TEEEEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTT---
T ss_pred EEEEecCcc-cCCcCHHHHHHHhCC------CceEEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccC---
Confidence 999998732 356899999998864 7899999999999999998 678888999999999999999842
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeE-EEeecCHHHHHHHHHccc-----------cCCCcHHHHH
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVG-TIYSYNDKVVTTARRMSS-----------FTLISSQTQY 316 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG-~i~~~~~~~~~~~~~~~~-----------~~~~s~~~q~ 316 (442)
....++..+ +..+++.|+||.+| ++ +| |+++ ++.+.+.++.... .+..+...+.
T Consensus 208 -~~~~~~~~~---------~~d~~~~s~~K~~g-~~--~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~ 273 (406)
T 3cai_A 208 -YRLLDIRET---------DADVVTVNAHAWGG-PP--IGAMVFR-DPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLA 273 (406)
T ss_dssp -TCCCCHHHH---------CCSEEEEEGGGGTS-CS--CEEEEES-CHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHH
T ss_pred -CCCCCchhc---------CCCEEEeehhhhcC-CC--cCeEEEE-ehHHHhhcCCcccCCCCCccccccCCCccHHHHH
Confidence 112233322 34578899999887 65 89 9998 4555554443321 2334555554
Q ss_pred HHHHHhcCch------------hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC---ceEEEEEecCCcccccChh
Q 046900 317 LLASMLSNKK------------FTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGN---AGLFCWMNLSPLLEEQTRE 380 (442)
Q Consensus 317 ~~~~~l~~~~------------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~---~g~~~~~~~~~~~~~~~~~ 380 (442)
++.+.++... .+.+++++.+++++++++++.+.|++. |+++..+. ++ ++++.++..
T Consensus 274 a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~------- 345 (406)
T 3cai_A 274 GVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFAVHKV------- 345 (406)
T ss_dssp HHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS-EEEEEETTB-------
T ss_pred HHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC-EEEEEECCc-------
Confidence 4444443111 012256788889999999999999986 77776653 55 688887641
Q ss_pred hHHHHHHHHHHcCcEEEeCCC------CCCCC-CCCEEEEEeec-CCHHHHHHHHHHHHH
Q 046900 381 GELALWDSMLHEVKLNISPGS------SCHCS-EPGWFRVCFAN-MSEQTLEVALKRIHN 432 (442)
Q Consensus 381 ~~~~l~~~l~~~~gi~v~pg~------~f~~~-~~~~iRls~~~-~~~e~i~~~l~~l~~ 432 (442)
+..++.+.|.++ ||.+.+|+ .|+.. ..+++||+++. .+++++++++++|++
T Consensus 346 ~~~~~~~~L~~~-gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 346 PADRVVQRLADN-GILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp CHHHHHHHHHHT-TEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHC-CcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 256788888665 99999987 33322 24789999983 378999999999875
No 114
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=1.6e-31 Score=261.92 Aligned_cols=300 Identities=15% Similarity=0.150 Sum_probs=223.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCC-CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEEEe
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDL-NRIVVTAGATAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVPIH 173 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~-~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~v~ 173 (442)
..++++.++++++ .+. ++|++|+|+++++..++.+++++||.|+++.++|.. +...+. ..|++++.++
T Consensus 58 ~~~l~~~la~~~~--------~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~~~ 128 (393)
T 3kgw_A 58 MEEIKQGIQYVFQ--------TRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMRAAEIAD-RIGARVHQMI 128 (393)
T ss_dssp HHHHHHHHHHHHT--------CCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHH-HTTCEEEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHHHHHHHH-HcCCceEEEe
Confidence 3455555555543 333 469999999999999999999999999999988753 255566 4899999999
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
++.+ +.+|+++|++.+++. ++++|++++|+||||.+++ +++|.++|++||+++|+||+|+.. ...+
T Consensus 129 ~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~g---~~~~- 194 (393)
T 3kgw_A 129 KKPG--EHYTLQEVEEGLAQH-----KPVLLFLVHGESSTGVVQP---LDGFGELCHRYQCLLLVDSVASLG---GVPI- 194 (393)
T ss_dssp CCTT--CCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTTT---TSCC-
T ss_pred CCCC--CCCCHHHHHHHHhhC-----CCcEEEEeccCCcchhhcc---HHHHHHHHHHcCCEEEEECCcccc---Cccc-
Confidence 8754 468999999999863 6889999999999999998 778889999999999999998732 1111
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc-------------------------cC
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS-------------------------FT 308 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~-------------------------~~ 308 (442)
... ..+..+++.|+||.++ .+.++||+++ ++.+.+.+..... .+
T Consensus 195 ~~~---------~~~~d~~~~s~sK~~~-~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (393)
T 3kgw_A 195 YMD---------QQGIDIMYSSSQKVLN-APPGISLISF-NDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHH 263 (393)
T ss_dssp CTT---------TTTCCEEEEESSSTTC-CCSSCEEEEE-CHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCC
T ss_pred chh---------hcCCCEEEecCccccc-CCCceeEEEE-CHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCC
Confidence 110 1244578899999874 3445899999 5666666543221 12
Q ss_pred CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC----ceEEEEEecCCcccccChhhHHH
Q 046900 309 LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN----AGLFCWMNLSPLLEEQTREGELA 384 (442)
Q Consensus 309 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~ 384 (442)
..+...+.++.+.++... +.++++.++.++++++++.+.|++.|+++..+. .++++|+.++... +..+
T Consensus 264 ~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 335 (393)
T 3kgw_A 264 TTPVTSLYCLRESLALIA--EQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGY------NWRD 335 (393)
T ss_dssp CCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTB------CHHH
T ss_pred CCCHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCC------CHHH
Confidence 345666666655554211 233677889999999999999999888876433 3667888887533 2678
Q ss_pred HHHHHHHcCcEEEeCCCCCCCCCCCEEEEEe-ec-CCHHHHHHHHHHHHHHHHHHHhh
Q 046900 385 LWDSMLHEVKLNISPGSSCHCSEPGWFRVCF-AN-MSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 385 l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~-~~-~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
+.+.|++++||.+.+|..+. .++++||++ +. .+++++++++++|++++++..+.
T Consensus 336 ~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 391 (393)
T 3kgw_A 336 IVSYVLDHFSIEISGGLGPT--EERVLRIGLLGYNATTENVDRVAEALREALQHCPKN 391 (393)
T ss_dssp HHHHHHHHHCEECBCCCGGG--TTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCBC
T ss_pred HHHHHHHhCCEEEeCCcccC--CCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 88888877799999988543 467999998 63 38999999999999999876543
No 115
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=3.8e-31 Score=264.95 Aligned_cols=319 Identities=14% Similarity=0.171 Sum_probs=221.1
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCC-cChHHhHhhhcCcE
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYY-PGFDRDLRWRTGIK 168 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~~~G~~ 168 (442)
.|.+..+..+||+++|++++ .+++++|+|+++++..++.+++++|| +++.|+| ..+...+.. .|++
T Consensus 70 ~y~~~~~~~~l~~~la~~~~----------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~-~G~~ 136 (456)
T 2ez2_A 70 AYAGSENFYHLERTVQELFG----------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEK-NGAV 136 (456)
T ss_dssp CSSSCHHHHHHHHHHHHHHC----------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHH-TTCE
T ss_pred hcccChhHHHHHHHHHHHhC----------CCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHHHHH-cCCE
Confidence 47667788999999999975 34899999999999999999999999 7889999 776777774 8999
Q ss_pred EEEEecCCC----C----CCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCC-CCCcCCCHHHHHHHHHHHHhcCcEEEEe
Q 046900 169 IVPIHCDSS----N----NFQITPQALEAAYKEAESKDMRVRGVLITNPSN-PLGATIQRSVLEELLDFATRKNIHLVSD 239 (442)
Q Consensus 169 v~~v~~~~~----~----~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~N-PtG~~~~~~~l~~l~~~~~~~~~~vi~D 239 (442)
++.++++++ . +|.+|+++|++++++.. ..++++|++++|+| |||.+++.+++++|+++|++||++||+|
T Consensus 137 ~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t--~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~D 214 (456)
T 2ez2_A 137 FVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYD 214 (456)
T ss_dssp EEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEecccccccccccccccCCCCHHHHHHHHHhcc--ccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEE
Confidence 999998732 2 36799999999997621 02358999999998 9999999999999999999999999999
Q ss_pred ccCCc----------CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc---
Q 046900 240 EIYSG----------SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS--- 306 (442)
Q Consensus 240 e~y~~----------~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~--- 306 (442)
|+|+. +.+.+..+.++...... ...++++ |++|.++ +| |+||++++++.+.+.+.....
T Consensus 215 e~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~d~~~~-S~kk~~~-~~-~gG~~~~~~~~~~~~~~~~~~~~~ 286 (456)
T 2ez2_A 215 ATRCVENAYFIKEQEQGFENKSIAEIVHEMFS-----YADGCTM-SGKKDCL-VN-IGGFLCMNDDEMFSSAKELVVVYE 286 (456)
T ss_dssp CTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHT-----TCSEEEE-ETTTTTC-CS-SCEEEEESCHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccccCCcchhhhhhhhcc-----cCCEEEE-eCcccCC-CC-ceeEEEECCHHHHHHHHHHHhhcc
Confidence 99986 44554322222111111 1345555 7888765 77 799999866666665543221
Q ss_pred ----cCCCcHHH-HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCC---cccccC
Q 046900 307 ----FTLISSQT-QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSP---LLEEQT 378 (442)
Q Consensus 307 ----~~~~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~---~~~~~~ 378 (442)
....+... +.++.+.++ .+. +...++.++..+++.+.|++.|+++..|.+++++|++++. ......
T Consensus 287 ~~~~~~~~~~~~~~a~a~~~~~---~~~---~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~ 360 (456)
T 2ez2_A 287 GMPSYGGLAGRDMEAMAIGLRE---AMQ---YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDE 360 (456)
T ss_dssp CCTTTTTCCHHHHHHHHHHHHH---HTC---HHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHTTTSCGGG
T ss_pred CcccccCcchhHHHHHHHHHHH---HhH---HHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEEEhHHhcCCCChhh
Confidence 12223222 221222221 110 1223333445567777887778888778889999998742 111111
Q ss_pred hhhHHHHHHHHHHcCcEEEeC-CCCCCC----------CCCCEEEEEeec--CCHHHHHHHHHHHHHHHHHHH
Q 046900 379 REGELALWDSMLHEVKLNISP-GSSCHC----------SEPGWFRVCFAN--MSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 379 ~~~~~~l~~~l~~~~gi~v~p-g~~f~~----------~~~~~iRls~~~--~~~e~i~~~l~~l~~~l~~~~ 438 (442)
+ ....++..|++++||.+.+ |..|.+ ...+++||+++. .+++++++++++|++++++..
T Consensus 361 ~-~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 361 F-PAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp C-HHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred c-cHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 1 1344577775555999766 443311 124789999983 489999999999999987643
No 116
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=1.2e-30 Score=257.97 Aligned_cols=300 Identities=11% Similarity=0.146 Sum_probs=222.7
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEE-EecChHHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEEEec
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIV-VTAGATAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~-~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~v~~ 174 (442)
.++.+.+.+++.+.++ +++++++ +++|+++++..++.+++++||.|+++.|+|+. +...++. .|++++.+++
T Consensus 43 ~~~~~~l~~~la~~~g----~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~-~g~~~~~v~~ 117 (416)
T 3isl_A 43 TGIMNETMEMLRELFQ----TKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAER-YGANVHMLEC 117 (416)
T ss_dssp HHHHHHHHHHHHHHTT----CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhC----CCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHh-cCCeeEEEec
Confidence 3444444444444443 4566665 88899999999999999999999999999987 6666774 8999999998
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s 254 (442)
+.+ +.+|+++|++++++. ++++|++++|+||||.+++ +++|.++|++||+++|+|++|+.... ..+
T Consensus 118 ~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~ 183 (416)
T 3isl_A 118 EWG--TVFDPEDIIREIKKV-----KPKIVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATIGGC----EVK 183 (416)
T ss_dssp CTT--CCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTTTTS----CCC
T ss_pred CCC--CCCCHHHHHHHHhhC-----CCcEEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCccccCC----Ccc
Confidence 764 468999999999842 7899999999999999999 77889999999999999999874221 111
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc-----------------------------
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS----------------------------- 305 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~----------------------------- 305 (442)
.. ..+..+++.|+||.++ .+.++||+++ ++.+.+.+....
T Consensus 184 ~~---------~~~~d~~~~s~~K~l~-g~~g~g~~~~-~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~ 252 (416)
T 3isl_A 184 VD---------EWKIDAAIGGTQKCLS-VPSGMAPITY-NERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLS 252 (416)
T ss_dssp TT---------TTTCSEEECCSSSTTC-CCSSEEEEEE-CHHHHHHHHTC------------------CCCCSCSTTCHH
T ss_pred hh---------hcCCCEEEecCccccC-CCCCeEEEEE-CHHHHHHhhccccccccccccccchhccCCCCCCccccchH
Confidence 11 1244588999999753 4456899998 555555554211
Q ss_pred -----------ccCCCcHHHHHHHHHHhcCchhHHHH-HHHHHHHHHHHHHHHHHHHHhCCCeeecCCc---eEEEEEec
Q 046900 306 -----------SFTLISSQTQYLLASMLSNKKFTENY-IKTNRERLQKRYQMIIEGLRSAGIECLKGNA---GLFCWMNL 370 (442)
Q Consensus 306 -----------~~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---g~~~~~~~ 370 (442)
..+..+...+.++.+.++ ...++ +++.++.++++++++.+.|++.|+++..+.+ +.++++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~---~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 329 (416)
T 3isl_A 253 QLEDYWSERRLNHHTEATTMLYALREGVR---LVLEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVTCVEI 329 (416)
T ss_dssp HHHHHTSTTCCCSSCCCHHHHHHHHHHHH---HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEEEEEC
T ss_pred HHHhhhcccCCCCCCCCHHHHHHHHHHHH---HHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEEEEeC
Confidence 123445566666656554 22344 6788899999999999999998888877654 56888888
Q ss_pred CCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHH-HHHHHHHHHHHHHHHH
Q 046900 371 SPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQT-LEVALKRIHNFMQKRE 438 (442)
Q Consensus 371 ~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~-i~~~l~~l~~~l~~~~ 438 (442)
+... +..++.+.|++++||.+.+|... ..++++||++. ..++++ +++++++|+++++++.
T Consensus 330 ~~~~------~~~~l~~~L~~~~gi~v~~g~~~--~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 330 PGGI------DGESVRDMLLAQFGIEIASSFGP--LAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp CTTC------CHHHHHHHHHHHHCEECBCCCST--TTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CCCC------CHHHHHHHHHHhCCEEEecCCCC--CCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 7532 26788888877779999998742 34679999993 224555 9999999999998754
No 117
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=1.4e-31 Score=258.92 Aligned_cols=335 Identities=12% Similarity=0.130 Sum_probs=226.0
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
+++|||+.+.+..+++.+.+.+.+.... ....|+......++++.+++++ + .+++|++|+
T Consensus 7 ~~~id~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~~~~~~~~~l~~~la~~~----g-----~~~~v~~~~ 66 (356)
T 1v72_A 7 PPALGFSSDNIAGASPEVAQALVKHSSG-----------QAGPYGTDELTAQVKRKFCEIF----E-----RDVEVFLVP 66 (356)
T ss_dssp CCCCBCSCGGGCCCCHHHHHHHHHTTSS-----------CCCSTTCSHHHHHHHHHHHHHH----T-----SCCEEEEES
T ss_pred CceEeeccCCccCCCHHHHHHHHhhccC-----------cccccccchHHHHHHHHHHHHh----C-----CCCcEEEeC
Confidence 4678999875555566666666655310 0124543333445555555543 3 245699999
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh--Hhhhc--CcEEEEEecCCCCCCcCCHHHHHH-HHHHHH-hcCCce
Q 046900 128 GATAANELLTFILADPGDALLVPTPYYPGFDRD--LRWRT--GIKIVPIHCDSSNNFQITPQALEA-AYKEAE-SKDMRV 201 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~--~~~~~--G~~v~~v~~~~~~~~~~d~~~l~~-~l~~~~-~~~~~~ 201 (442)
|+++++.+++.+++++||.|+++.|+|..+... +.. . |++++.+|.+ ++.+|+++|++ .+++.. ..+.++
T Consensus 67 ~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~ 142 (356)
T 1v72_A 67 TGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPEF-FSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQP 142 (356)
T ss_dssp CHHHHHHHHHHTSCCTTEEEEECTTSHHHHSSTTHHHH-HTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEE
T ss_pred CccHHHHHHHHHhcCCCCEEEEcCccchhhhhchHHHH-HhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCc
Confidence 999999999999999999999999998776555 663 5 9999999875 35789999998 775310 112368
Q ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCC--CCCCcccHHHHHhhhcCCCCCcEEEEecCccc
Q 046900 202 RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAF--SSSEFVSIAEILEARQYKDSERVHIVYSLSKD 279 (442)
Q Consensus 202 ~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~--~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~ 279 (442)
++|++++|+| ||.+++.+++++|+++|++||++||+|++|..+.. .+.... ...+.. ...+ ++.|+||.
T Consensus 143 ~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~-~~~~~~------~~d~-~~~s~sK~ 213 (356)
T 1v72_A 143 ACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPA-EMTWKA------GVDA-LSFGATKN 213 (356)
T ss_dssp EEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTT-TTTGGG------TCCE-EEECCGGG
T ss_pred eEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHH-Hhhhhh------cCCE-EEEecccC
Confidence 9999999987 99999999999999999999999999999975321 111111 100101 1223 35689998
Q ss_pred CCCCCceeEEEeecCHHHHHHHHHcccc-C---CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 046900 280 LGLPGFRVGTIYSYNDKVVTTARRMSSF-T---LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-G 354 (442)
Q Consensus 280 ~g~~G~RiG~i~~~~~~~~~~~~~~~~~-~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 354 (442)
|. ....||+++ ++.+.+.+...... + ..+...+..+...+.+..+ .+..++++++++++.+.|++. |
T Consensus 214 -g~-~~G~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~l~~~L~~~~g 285 (356)
T 1v72_A 214 -GV-LAAEAIVLF-NTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLW-----LRNARKANAAAQRLAQGLEGLGG 285 (356)
T ss_dssp -TC-SSCEEEEES-SGGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHH-----HHHHHHHHHHHHHHHHHHTTCTT
T ss_pred -CC-cCccEEEEE-CHHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhhCCC
Confidence 42 233348887 45555544332211 1 1122333334455554322 234566778889999999885 8
Q ss_pred CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHH
Q 046900 355 IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNF 433 (442)
Q Consensus 355 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~ 433 (442)
+++..|.+++++|++++. ++++.|.++ ||.+.||. |+ ++++|+++. ..+++++++++++|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~-gi~v~~g~-~~---~~~iRi~~~~~~~~~~i~~~~~~l~~~ 349 (356)
T 1v72_A 286 VEVLGGTEANILFCRLDS-----------AMIDALLKA-GFGFYHDR-WG---PNVVRFVTSFATTAEDVDHLLNQVRLA 349 (356)
T ss_dssp EEEESCCCSSEEEEEECH-----------HHHHHHHHT-TCBCBCSS-SS---TTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred cEEccCCCccEEEEEcCH-----------HHHHHHHhc-CeEEeccc-cC---CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 888777788899998742 577777666 99999987 54 679999986 33799999999999998
Q ss_pred HHHHHh
Q 046900 434 MQKRER 439 (442)
Q Consensus 434 l~~~~~ 439 (442)
+++...
T Consensus 350 l~~~~~ 355 (356)
T 1v72_A 350 ADRTQE 355 (356)
T ss_dssp C-----
T ss_pred HHhhcc
Confidence 877543
No 118
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=4.3e-32 Score=264.70 Aligned_cols=322 Identities=13% Similarity=0.104 Sum_probs=226.9
Q ss_pred CCCceeeeecccc--cc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 46 NPSGVIQMGLAEN--QV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 46 ~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
....+|||+.+.+ .+ +++.+.+.+.+..... + .....|+ ..+..+++++++++++ + ++
T Consensus 26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~----~----~~~~~y~-~~~~~~l~~~la~~~g--------~-~~ 87 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKL----L----HVSNLYE-NPWQEELAHKLVKHFW--------T-EG 87 (375)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHC----S----CCCTTBC-CHHHHHHHHHHHHTSS--------S-CE
T ss_pred CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhc----c----ccCcccC-CHHHHHHHHHHHhhcC--------C-CC
Confidence 3456789988763 34 3455555444332110 0 0123574 3577899999999863 3 48
Q ss_pred cEEEecChHHHHHHHHHh---hc---CCC-CeEEEcCCCCcChHHhHhhhcCcE-------------EEEEecCCCCCCc
Q 046900 122 RIVVTAGATAANELLTFI---LA---DPG-DALLVPTPYYPGFDRDLRWRTGIK-------------IVPIHCDSSNNFQ 181 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~---l~---~~g-d~Vl~~~p~y~~~~~~~~~~~G~~-------------v~~v~~~~~~~~~ 181 (442)
+|++|+|+++++.+++.+ +. ++| |.|++++|+|+.+...+.. .+.. +..++.
T Consensus 88 ~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------- 159 (375)
T 2eh6_A 88 KVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLS-ATGQPKFHKGFEPLVPGFSYAKL------- 159 (375)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHH-HCBCGGGTTTTCSCCSSEEEECT-------
T ss_pred eEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhh-hcCCccccCCCCCCCCCceeCCC-------
Confidence 999999999999999865 45 788 9999999999988765542 2221 333331
Q ss_pred CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHh
Q 046900 182 ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILE 260 (442)
Q Consensus 182 ~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~ 260 (442)
.|+++|++.+++ ++++|++++|+||||.+ .+.+++++|+++|++||+++|+||+|+++.+.+..+ ++..+.
T Consensus 160 ~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~- 231 (375)
T 2eh6_A 160 NDIDSVYKLLDE------ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFY-AYQHFN- 231 (375)
T ss_dssp TCHHHHHTTCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGT-
T ss_pred chHHHHHHHhcC------CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcch-hhhhcC-
Confidence 478999888753 78999999999999999 468889999999999999999999999765443221 222121
Q ss_pred hhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 046900 261 ARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRER 338 (442)
Q Consensus 261 ~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 338 (442)
...+++ ||||.++ +|+|+||++++ +.+.+.++. ....+..+++.|.++.+.++.. .+..++
T Consensus 232 -----~~~d~~---s~SK~~~-~g~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~ 294 (375)
T 2eh6_A 232 -----LKPDVI---ALAKGLG-GGVPIGAILAR-EEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV-------EKLLPH 294 (375)
T ss_dssp -----CCCSEE---EECGGGG-TTSCCEEEEEE-HHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH-------HHHHHH
T ss_pred -----CCCCEE---EEccccc-CCCCeEEEEEc-HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-------HHHHHH
Confidence 012333 8899998 79999999995 455554443 2233456778888777766531 156677
Q ss_pred HHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-c
Q 046900 339 LQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-N 417 (442)
Q Consensus 339 ~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~ 417 (442)
++++++++.+.|++.+....+ ..|+++|++++.. ..++++.|+++ ||.+.|+ .++++||+++ .
T Consensus 295 ~~~~~~~l~~~L~~~~~~~~~-~~g~~~~~~~~~~--------~~~~~~~l~~~-gi~~~~~------~~~~iRi~~~~~ 358 (375)
T 2eh6_A 295 VREVGNYFKEKLKELGKGKVK-GRGLMLGLELERE--------CKDYVLKALEK-GLLINCT------AGKVLRFLPPLI 358 (375)
T ss_dssp HHHHHHHHHHHHHHTTSSEEE-EETTEEEEECSSC--------CHHHHHHHHHT-TEECEEE------TTTEEEECCCTT
T ss_pred HHHHHHHHHHHHHHHhcCCce-EEEEEEEEEEcCc--------HHHHHHHHHHC-CCEEecC------CCCEEEEECCCC
Confidence 888889999999887654443 4466899988741 35788888775 9999985 2578999976 4
Q ss_pred CCHHHHHHHHHHHHHHH
Q 046900 418 MSEQTLEVALKRIHNFM 434 (442)
Q Consensus 418 ~~~e~i~~~l~~l~~~l 434 (442)
.+++++++++++|++++
T Consensus 359 ~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 359 IQKEHIDRAISVLREIL 375 (375)
T ss_dssp CCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHhC
Confidence 48999999999998763
No 119
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.98 E-value=6.4e-31 Score=261.35 Aligned_cols=358 Identities=13% Similarity=0.078 Sum_probs=217.1
Q ss_pred CCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 46 NPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 46 ~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
....+||++.+ .++++ ++.+.+.+.+.... ...|....+..++++++++++.+.++ .+++
T Consensus 27 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~------------~~~~~~~~~~~~~~~~l~~~la~~~~----~~~~ 90 (430)
T 3i4j_A 27 AGRRYLDGSSGALVANIGHGRAEVGERMAAQAAR------------LPFVHGSQFSSDVLEEYAGRLARFVG----LPTF 90 (430)
T ss_dssp TSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHH------------CCCCCTTTCEEHHHHHHHHHHHHHTT----CTTC
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHh------------cccccccccCCHHHHHHHHHHHHhCC----CCCC
Confidence 45678899876 45553 34444444433211 12233334556777888888877654 5678
Q ss_pred cEEEecChHHHHHHHHHhhc--------CCCCeEEEcCCCCcChHHhHhhhcCc---------------EEEEEecCCCC
Q 046900 122 RIVVTAGATAANELLTFILA--------DPGDALLVPTPYYPGFDRDLRWRTGI---------------KIVPIHCDSSN 178 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~~G~---------------~v~~v~~~~~~ 178 (442)
+|++|+|+++++..++++++ .++|.|++.+|+|.++...+.. .+. ++..++.+...
T Consensus 91 ~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
T 3i4j_A 91 RFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLA-ASGMGARRELYTPLMRPEAWPKLPKPDPA 169 (430)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC--------------------------CGGGSCEECCCCTT
T ss_pred EEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCccccc-ccCccccccccCCcCCCCCceEcCCCccc
Confidence 99999999999999998886 4478999999999987765442 222 12222221100
Q ss_pred -CCcCCHHHHHHHHHHHHhcCCceeEEEEeCC-CC-CCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCccc
Q 046900 179 -NFQITPQALEAAYKEAESKDMRVRGVLITNP-SN-PLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 179 -~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P-~N-PtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s 254 (442)
....|++.|++.+++... .++ ++++++| +| ++|. +.+.+.+++|.++|++||+++|+||+|.++.+.+..+ .
T Consensus 170 ~~~~~~~~~le~~l~~~~~--~~~-~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~-~ 245 (430)
T 3i4j_A 170 RNGAEDAEGLRALLEREGP--ETV-AAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPL-A 245 (430)
T ss_dssp SCHHHHHTHHHHHHHHHCG--GGE-EEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-G
T ss_pred chhhHHHHHHHHHHHhcCC--CCE-EEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-h
Confidence 011256889998875310 144 4555666 56 8886 6688889999999999999999999999876655422 2
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH------ccccCCCcHHHHHHHHHHhcCchh
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR------MSSFTLISSQTQYLLASMLSNKKF 327 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~------~~~~~~~s~~~q~~~~~~l~~~~~ 327 (442)
.... +. .... +.+|||+++ +| +|+||+++ ++.+.+.+.. ....+..++++|.++.++|+..+.
T Consensus 246 ~~~~-~~----~~~d---i~t~sK~l~-~G~~r~G~~~~-~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~ 315 (430)
T 3i4j_A 246 LSRW-SG----VTPD---IAVLGKGLA-AGYAPLAGLLA-APQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER 315 (430)
T ss_dssp GGGT-TT----CCCS---EEEECGGGT-TTSSCCEEEEE-CHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH
T ss_pred hhhh-cC----CCCc---EEEEccccc-CCccccEEEEE-CHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc
Confidence 1111 00 0122 347999998 69 99999999 6777777764 233466789999988888863221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCCcccccC---hhhHHHHHHHHHHcCcEEEeCCCCC
Q 046900 328 TENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSPLLEEQT---REGELALWDSMLHEVKLNISPGSSC 403 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~l~~~l~~~~gi~v~pg~~f 403 (442)
+++.++.++..+..++.+.+.+.+. ++....+.|. |+|+++.+...... .....++++.|+++ ||.+.|+..+
T Consensus 316 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~ 392 (430)
T 3i4j_A 316 -EDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGL-LLGVVLGDLATGQAFETPGIASRIGAAALKR-GLITYPGSGA 392 (430)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETT-EEEEEEC------------CHHHHHHHHHHT-TEECC-----
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEE-EEEEEeccccccCCCccHHHHHHHHHHHHhC-CCEEEecccc
Confidence 1223344444444445555544444 4555555554 77777753211000 01236788888876 9999998433
Q ss_pred C-CCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 404 H-CSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 404 ~-~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
. +...+++||+++ ..+++++++++++|++++++.
T Consensus 393 ~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 393 EPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp ------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2 223578999987 348999999999999998764
No 120
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.97 E-value=4.8e-30 Score=250.16 Aligned_cols=298 Identities=12% Similarity=0.090 Sum_probs=211.8
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCC--CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH--HhHhhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDL--NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD--RDLRWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~--~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~~G~~v~~ 171 (442)
+..++++++.+++.+.++ +++ +.+++|+|+++++.+++.+++++||.|+++.|.|.... ..+. ..|++++.
T Consensus 49 ~~~~~~~~~~~~la~~~g----~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~-~~g~~~~~ 123 (376)
T 3f0h_A 49 EFSSTMLENEKFMLEYAK----APEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCE-IHEIPYVA 123 (376)
T ss_dssp HHHHHHHHHHHHHHHHHT----CCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHH-HTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHhC----CCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHHHHHHHH-HcCCceEE
Confidence 445666677777766655 333 34556999999999999999999999999998776543 2345 37999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++.+. ++.+|++.|++.+.+ +++++++++|+||||.+++ +++|+++|++||+++|+|++|+.+..
T Consensus 124 v~~~~--~~~~d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~---- 188 (376)
T 3f0h_A 124 LKLEH--GKKLTKEKLYEYDNQ------NFTGLLVNVDETSTAVLYD---TMMIGEFCKKNNMFFVCDCVSAFLAD---- 188 (376)
T ss_dssp EECCT--TCCCCHHHHHTTTTS------CCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTS----
T ss_pred EeCCC--CCCCCHHHHHHhhcc------CceEEEEecccCCcceecC---HHHHHHHHHHcCCEEEEEcCccccCc----
Confidence 99864 467999999987543 7899999999999999999 88899999999999999999985332
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHHcc-------------------ccCCCc
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMS-------------------SFTLIS 311 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~-------------------~~~~~s 311 (442)
...+... +..+++.|+||.++ .+| +|++++ ++.+.+.+.... ..+..+
T Consensus 189 ~~~~~~~---------~~d~~~~s~~K~l~~~~G--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (376)
T 3f0h_A 189 PFNMNEC---------GADVMITGSQKVLACPPG--ISVIVL-APRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPA 256 (376)
T ss_dssp CCCHHHH---------TCSEEEEETTTTTCCCSS--CEEEEE-CHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCC
T ss_pred ccccccc---------CccEEEecCcccccCCCc--eEEEEE-CHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCc
Confidence 1222222 33478899999997 555 688888 556655554321 112233
Q ss_pred HHHHHHHHHHhcCchhHHH--HHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHH
Q 046900 312 SQTQYLLASMLSNKKFTEN--YIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSM 389 (442)
Q Consensus 312 ~~~q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l 389 (442)
...+.++.+.++ ++.+ .+++.++.++++++++.+.|++.|+++..+.....++.-.+... +..++.+.|
T Consensus 257 ~~~~~a~~~al~---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~l 327 (376)
T 3f0h_A 257 VGILLQINERLK---EIKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHPTTA------NAYDIFLKL 327 (376)
T ss_dssp HHHHHHHHHHHH---HHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEESSS------CHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeCCCC------CHHHHHHHH
Confidence 333333434333 2222 36778888899999999999988877665432222222112211 267888888
Q ss_pred HHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 390 LHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 390 ~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
.+++||.+.||.. ...++++||++. ..+++++++++++|++++++
T Consensus 328 ~~~~gi~v~~g~~--~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 328 KDEYGIWICPNGG--EMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp HHHSSEECEECCG--GGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHhCCEEEecCcc--ccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 8877999999843 234678999996 34899999999999998764
No 121
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.97 E-value=2.7e-31 Score=261.26 Aligned_cols=286 Identities=14% Similarity=0.144 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC------C-CCeEEEcCCCCcChHH-hHhhhcCcE--
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD------P-GDALLVPTPYYPGFDR-DLRWRTGIK-- 168 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~------~-gd~Vl~~~p~y~~~~~-~~~~~~G~~-- 168 (442)
++++++++.+.+.+| +++|++|+|+++++..++.++.. + ++.|++.+|+|.+... .+.. .|.+
T Consensus 82 ~~~~~l~~~la~~~g------~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~-~g~~~~ 154 (397)
T 2ord_A 82 RPQMELAELLSKNTF------GGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTA-TGQPKY 154 (397)
T ss_dssp HHHHHHHHHHHHTTT------SCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHH-SBCHHH
T ss_pred HHHHHHHHHHHHhcC------CCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhc-cCChhh
Confidence 344444444444322 68999999999999999988863 4 4789999999976443 5553 6765
Q ss_pred ----------EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCc-CCCHHHHHHHHHHHHhcCcEEE
Q 046900 169 ----------IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGA-TIQRSVLEELLDFATRKNIHLV 237 (442)
Q Consensus 169 ----------v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l~~~~~~~~~~vi 237 (442)
++.++. .|+++|++.+++ ++++|++++|+||||. +++.+++++|+++|++||+++|
T Consensus 155 ~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li 221 (397)
T 2ord_A 155 QKPFEPLVPGFEYFEF-------NNVEDLRRKMSE------DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLV 221 (397)
T ss_dssp HGGGCSCCTTEEEECT-------TCHHHHHHHCCT------TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEE
T ss_pred ccccCCCCCCeeEecC-------CCHHHHHHHhhc------CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 666664 278999988764 7899999999999999 9999999999999999999999
Q ss_pred EeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHH
Q 046900 238 SDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQ 315 (442)
Q Consensus 238 ~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q 315 (442)
+||+|.++.+.+. +.++..+.. ...+ .||||.++ +|+|+||++++++ +. .++. ....+..+++.|
T Consensus 222 ~De~~~~~~~~g~-~~~~~~~~~------~~d~---~s~sK~~~-~G~r~G~~~~~~~-~~-~l~~~~~~~~~~~~~~~~ 288 (397)
T 2ord_A 222 FDEVQCGMGRTGK-LFAYQKYGV------VPDV---LTTAKGLG-GGVPIGAVIVNER-AN-VLEPGDHGTTFGGNPLAC 288 (397)
T ss_dssp EECTTTTTTTTSS-SSHHHHHTC------CCSE---EEECGGGG-TTSCCEEEEECST-TC-CCCTTSSCCSSTTCHHHH
T ss_pred EEecccCCccCcc-chhhhhhCC------CCCe---eeeccccC-CCcCeEEEEEchH-hc-ccCCCCcCCCCCCCHHHH
Confidence 9999998766553 233333321 1222 28899998 9999999999655 33 3332 222355688888
Q ss_pred HHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeee--cCCceEEEEEecCCcccccChhhHHHHHHHHHH
Q 046900 316 YLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA--GIECL--KGNAGLFCWMNLSPLLEEQTREGELALWDSMLH 391 (442)
Q Consensus 316 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 391 (442)
.++.+.++.... ++.++.++++++++.+.|++. ++... .+..|.|+|++++... +..++++.|++
T Consensus 289 ~a~~~~l~~~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~l~~~l~~ 357 (397)
T 2ord_A 289 RAGVTVIKELTK-----EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEV------SNREVATKCFE 357 (397)
T ss_dssp HHHHHHHHHHTS-----TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECChH------HHHHHHHHHHH
Confidence 888877764221 245667777888888888764 23321 1233457888887522 25678888877
Q ss_pred cCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHH
Q 046900 392 EVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 392 ~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~ 435 (442)
+ ||.+.||. ++++||+++ ..+++++++++++|+++++
T Consensus 358 ~-gi~v~~~~------~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 358 N-KLLVVPAG------NNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp T-TEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred C-CCEEccCC------CCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 5 99999962 578999965 3389999999999999875
No 122
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.97 E-value=2e-30 Score=252.85 Aligned_cols=299 Identities=10% Similarity=0.030 Sum_probs=203.0
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcCcEEEEEec
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHC 174 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~ 174 (442)
..+++.+++++.+.+|. . +++++++|+|+++++..++.++ +||+|+++.|+|+.+.. .++ ..|++++.+
T Consensus 57 ~~~~~~~~~~~a~~~g~--~-~~~~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~-~~g~~~~~v-- 128 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGG--D-ENDKCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIERSCK-IVNAKYFES-- 128 (374)
T ss_dssp HHHHHHHHHHHHHHHTC--C-TTEEEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHHHH-HTTCEEEEE--
T ss_pred hHHHHHHHHHHHHHhCC--C-CcceEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHHHHH-HcCcEEEEe--
Confidence 45566777777666551 1 3578999999999999999988 99999999999877544 455 389998887
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeE-EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRG-VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~-v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
.|++++++. + .++++ |++++|+||||. +..++++|.++|++||+++|+||+|+.+..+.....
T Consensus 129 -------~d~~~l~~~-~------~~~~~~v~~~~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~ 192 (374)
T 2aeu_A 129 -------DKVGEILNK-I------DKDTLVIITGSTMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQP 192 (374)
T ss_dssp -------SCHHHHHTT-C------CTTEEEEEECBCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCC
T ss_pred -------CCHHHHHhc-C------CCccEEEEEccCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCcccccccccccC
Confidence 267888776 3 27889 899999999997 778899999999999999999999987531000011
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchhHHHH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKFTENY 331 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~ 331 (442)
+.... +..++++|+||.+ +|+|+||++++ +.+.+.++..... +.++++.|.++.+.++.... +.
T Consensus 193 ~~~~~---------~~di~~~S~sK~l--~g~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~ 258 (374)
T 2aeu_A 193 PALKL---------GADLVVTSTDKLM--EGPRGGLLAGK-KELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNL--ER 258 (374)
T ss_dssp CHHHH---------TCSEEEEETTSSS--SSCSCEEEEEE-HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCH--HH
T ss_pred Ccccc---------CCcEEEecCcccc--cCcceEEEEEC-HHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhH--HH
Confidence 12222 2347889999985 57899999984 5666666554332 34577888888777765321 11
Q ss_pred HHHHHHHH----HHHHHHHHHHHHhC----CCeee-cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCC
Q 046900 332 IKTNRERL----QKRYQMIIEGLRSA----GIECL-KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSS 402 (442)
Q Consensus 332 ~~~~~~~~----~~~~~~l~~~L~~~----g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~ 402 (442)
+++..+.. +++++.+.+.|... |+.+. .+.+.+|.|.+++.... ..+..+++..+++++||.+.||..
T Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gV~v~~g~~ 335 (374)
T 2aeu_A 259 IRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTIN---IKKLIEIGFNLLKNYGIITITVAG 335 (374)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHH---HHHHHHHHHHHHHHHCEECSTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeeccccccc---ccchHHHHHHHHHhCCEEEecCCC
Confidence 12221111 22256666666653 56654 45565556655432110 012234666777666999999988
Q ss_pred CCCCCCCEEEEEeecCC--HHHHHHHHHHHHHHHHHHH
Q 046900 403 CHCSEPGWFRVCFANMS--EQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 403 f~~~~~~~iRls~~~~~--~e~i~~~l~~l~~~l~~~~ 438 (442)
|. ..++++||+++..+ +++++++++.|++++++..
T Consensus 336 ~~-~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~ 372 (374)
T 2aeu_A 336 MP-GASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAF 372 (374)
T ss_dssp SC-SSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHT
T ss_pred CC-CCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 74 34578999997422 2237788888888777654
No 123
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.97 E-value=2.1e-30 Score=253.40 Aligned_cols=297 Identities=11% Similarity=0.090 Sum_probs=218.9
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc---CCCCeEEEc-CCCCcChH-HhHhhhcCcEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA---DPGDALLVP-TPYYPGFD-RDLRWRTGIKIV 170 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~---~~gd~Vl~~-~p~y~~~~-~~~~~~~G~~v~ 170 (442)
...++++.++++++.. .++++++|++|+|+++++.+++.++. ++||.|+++ .|+|..+. ..++ ..|++++
T Consensus 39 ~~~~~~~~l~~~~~~~----~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~-~~g~~~~ 113 (385)
T 2bkw_A 39 IFQRVLKNTRAVFKSA----AASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLR-SYGAQVD 113 (385)
T ss_dssp HHHHHHHHHHHHTTCC----GGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHH-HTTCEEE
T ss_pred HHHHHHHHHHHHhCCC----CCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHH-HcCCceE
Confidence 3567788888887643 23567899999999999999999998 899999887 55666553 5566 4899999
Q ss_pred EEec-CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc--CcEEEEeccCCcCCC
Q 046900 171 PIHC-DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK--NIHLVSDEIYSGSAF 247 (442)
Q Consensus 171 ~v~~-~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~--~~~vi~De~y~~~~~ 247 (442)
.+++ +. ++.+|++.|++++++ .++++|++++|+||||.+++ +++|+++|+++ |++||+||+|+..
T Consensus 114 ~v~~~~~--~~~~d~~~l~~~l~~-----~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~-- 181 (385)
T 2bkw_A 114 VVRPLKI--GESVPLELITEKLSQ-----NSYGAVTVTHVDTSTAVLSD---LKAISQAIKQTSPETFFVVDAVCSIG-- 181 (385)
T ss_dssp EECCSST--TSCCCHHHHHHHHHH-----SCCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTSEEEEECTTTTT--
T ss_pred EEecCCC--CCCCCHHHHHHHHhc-----CCCCEEEEEccCCCcCeEcC---HHHHHHHHHhhCCCCEEEEECccccC--
Confidence 9998 54 467899999999875 26789999999999999998 67889999999 9999999999732
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHH----------------------Hc
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTAR----------------------RM 304 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~----------------------~~ 304 (442)
.. ..++.. .+..+++.|+||.++ .+| +||++++++.+.+.++ ..
T Consensus 182 -~~-~~~~~~---------~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (385)
T 2bkw_A 182 -CE-EFEFDE---------WGVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENY 248 (385)
T ss_dssp -TS-CCCTTT---------TTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHH
T ss_pred -Cc-cccccc---------cCceEEEecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhh
Confidence 21 112111 244578899999664 566 4999995443330221 11
Q ss_pred cc-----cCCCcHHHHHHHHHHhcCchhHHHH-HHHHHHHHHHHHHHHHHHH-HhCCCeeecC-----CceEEEEEecCC
Q 046900 305 SS-----FTLISSQTQYLLASMLSNKKFTENY-IKTNRERLQKRYQMIIEGL-RSAGIECLKG-----NAGLFCWMNLSP 372 (442)
Q Consensus 305 ~~-----~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~L-~~~g~~~~~~-----~~g~~~~~~~~~ 372 (442)
.. .+..+...+.++.+.++. ..+. +++.+++++++++++.+.| ++.|+++..+ ..++++|+.++.
T Consensus 249 ~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 325 (385)
T 2bkw_A 249 EAGKGAYFATPPVQLINSLDVALKE---ILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVAD 325 (385)
T ss_dssp HTTCCCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECSC
T ss_pred hccCCCCCCCCCHHHHHHHHHHHHH---HHHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCcccccCCceEEEecCC
Confidence 11 134566666666666542 2222 5677888999999999999 8878887653 246788998864
Q ss_pred cccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEE-ee----cCCHHHHHHHHHHHHHHHHH
Q 046900 373 LLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVC-FA----NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 373 ~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls-~~----~~~~e~i~~~l~~l~~~l~~ 436 (442)
..++.+.|.++ ||.+.+|..|. ...+++||+ ++ ..+++++++++++|++++++
T Consensus 326 ---------~~~~~~~l~~~-gi~v~~g~~~~-~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 326 ---------PPDVIAFLKSH-GVVIAGGIHKD-IGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp ---------HHHHHHHHHHT-TEECBCCCCTT-TGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred ---------HHHHHHHHHHC-CeEEeCCCCcc-cCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 45778888665 99999987653 245799999 66 24889999999999988754
No 124
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.97 E-value=5.2e-32 Score=266.38 Aligned_cols=295 Identities=12% Similarity=0.085 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc----CCCC-eEEEcCCCCcChHHhHhh--hcCcEEEE
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA----DPGD-ALLVPTPYYPGFDRDLRW--RTGIKIVP 171 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~----~~gd-~Vl~~~p~y~~~~~~~~~--~~G~~v~~ 171 (442)
++.+.+.+++.+.++ +++++|++|+|+++++.+++.+++ ++|| .|+++.++|+.+...+.. ..|++++.
T Consensus 63 ~~~~~l~~~la~~~~----~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~ 138 (400)
T 3vax_A 63 RGVERAREYLASTVS----AEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDF 138 (400)
T ss_dssp HHHHHHHHHHHHHTT----CCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHcC----CCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEE
Confidence 344444444444433 568899999999999999999998 8999 999999999987665542 26999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
+++++ ++.+|+++|++++++ +++++++++|+||||.+++ +++|+++|+++|++||+||+|+... .
T Consensus 139 v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~ 203 (400)
T 3vax_A 139 LTPGP--SGRISVEGVMERLRP------DTLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----V 203 (400)
T ss_dssp ECCCT--TCCCCHHHHHTTCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----S
T ss_pred EccCC--CCCcCHHHHHHhcCC------CceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----C
Confidence 99875 467899999998864 7899999999999999999 6788999999999999999998422 1
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEe-ecCHHHH---HHHHH---------ccccCCCcHHHHHHH
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIY-SYNDKVV---TTARR---------MSSFTLISSQTQYLL 318 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~-~~~~~~~---~~~~~---------~~~~~~~s~~~q~~~ 318 (442)
..++.. . ..+++.|+||.+|.+| +|+++ ++++.+. ..+.. ....+..+...+.++
T Consensus 204 ~~~~~~---------~-~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 271 (400)
T 3vax_A 204 PGDLTT---------P-IDMISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGL 271 (400)
T ss_dssp GGGGGS---------C-CSEEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHH
T ss_pred CcChhh---------c-CcEEEEeHHHhCCCCc--eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHH
Confidence 111110 1 3478899999887555 56766 6552111 01111 111234456666666
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc---eEEEEEecCCcccccChhhHHHHHHHHHHcCcE
Q 046900 319 ASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA---GLFCWMNLSPLLEEQTREGELALWDSMLHEVKL 395 (442)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi 395 (442)
.+.++ ...+++++.++.++++++++.+.|+..|+++..+.+ +.++++.++.. +..++.+.|. + ||
T Consensus 272 ~~al~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~-~-gi 339 (400)
T 3vax_A 272 AEAAK---IFEAEHAQWQVAAQDLRSRLLAGLASTSFQVNGDQDHVVPHILNLSFEDV-------DAEAFLVTLK-D-LV 339 (400)
T ss_dssp HHHHH---HHHHSHHHHHHHHHHHHHHHHHHHTTTTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHHH-H-HH
T ss_pred HHHHH---HHHhhHHHHHHHHHHHHHHHHHhhCCCCEEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHHh-c-Cc
Confidence 55554 224457788899999999999999844788776654 34666676642 2567888887 5 99
Q ss_pred EEeCCCCCCCC-------------C----CCEEEEEe-e-cCCHHHHHHHHHHHHHHHHH
Q 046900 396 NISPGSSCHCS-------------E----PGWFRVCF-A-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 396 ~v~pg~~f~~~-------------~----~~~iRls~-~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
.+.+|..|... . ++++||++ + ..+++++++++++|++++++
T Consensus 340 ~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 340 AVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp HHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred EEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 99998765421 1 48999999 6 33788999999999998764
No 125
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.97 E-value=3.6e-30 Score=253.78 Aligned_cols=334 Identities=14% Similarity=0.126 Sum_probs=226.9
Q ss_pred CCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 45 TNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 45 ~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
..+..+||++.+. +++ +++.+.+.+.+...... .....|+. ....++++.++++ ++ .
T Consensus 36 ~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~--------~~~~~~~~-~~~~~l~~~la~~----~~------~ 96 (406)
T 4adb_A 36 QQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFW--------HTGNGYTN-EPVLRLAKKLIDA----TF------A 96 (406)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCS--------CCCTTSCC-HHHHHHHHHHHHH----SS------C
T ss_pred CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcc--------cccCCcCC-HHHHHHHHHHHhh----CC------C
Confidence 3456788998763 333 23445554443321100 00122322 2234455554444 33 5
Q ss_pred CcEEEecChHHHHHHHHHhhcC-------CC-CeEEEcCCCCcChHHhHhhhcC------------cEEEEEecCCCCCC
Q 046900 121 NRIVVTAGATAANELLTFILAD-------PG-DALLVPTPYYPGFDRDLRWRTG------------IKIVPIHCDSSNNF 180 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~~G------------~~v~~v~~~~~~~~ 180 (442)
++|++|+|+++++..++.++.. +| |.|++++|+|..+...+....+ .++..+|.
T Consensus 97 ~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 170 (406)
T 4adb_A 97 DRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY------ 170 (406)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT------
T ss_pred CeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC------
Confidence 6999999999999999998864 55 9999999999988655442222 24444442
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC--CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHH
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATI--QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEI 258 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~--~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~ 258 (442)
.|+++|++.+++ ++++|+++ |+||||.++ +.+++++|+++|++||++||+||+|+++.+.+..+ +....
T Consensus 171 -~d~~~l~~~l~~------~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~ 241 (406)
T 4adb_A 171 -NDINSASALIDD------STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHY 241 (406)
T ss_dssp -TCHHHHHTTCST------TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHH
T ss_pred -CcHHHHHHHhcC------CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhc
Confidence 378999988753 78888877 999999998 99999999999999999999999999876665432 22222
Q ss_pred HhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHHHhcCchhHHHHHHHHH
Q 046900 259 LEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLASMLSNKKFTENYIKTNR 336 (442)
Q Consensus 259 ~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 336 (442)
.. ..+++ ||||.++ +|+|+||+++ ++.+.+.+.... ..+..+++.|.++.+.++.... ++.+
T Consensus 242 ~~------~~d~~---t~sK~~~-~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~ 305 (406)
T 4adb_A 242 GV------TPDLL---TTAKALG-GGFPVGALLA-TEECARVMTVGTHGTTYGGNPLASAVAGKVLELINT-----PEML 305 (406)
T ss_dssp TC------CCSEE---EECGGGG-TTSCCEEEEE-CHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS-----HHHH
T ss_pred CC------CCCEE---Eechhhc-CCCCeEEEEE-cHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-----cCHH
Confidence 11 23333 7899999 9999999998 566665554332 2356788888888877763221 3455
Q ss_pred HHHHHHHHHHHHHHHhCC----CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEE
Q 046900 337 ERLQKRYQMIIEGLRSAG----IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFR 412 (442)
Q Consensus 337 ~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iR 412 (442)
+.++++++++.+.|++.+ .....+..|+++|+.++.... .+..++++.|+++ ||.+.|+. ++++|
T Consensus 306 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~l~~~-gi~v~~~~------~~~iR 374 (406)
T 4adb_A 306 NGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYA----GQAKQISQEAAKA-GVMVLIAG------GNVVR 374 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTT----TCHHHHHHHHHHT-TEECEESS------TTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcH----HHHHHHHHHHHHC-CcEEeecC------CCeEE
Confidence 666777777777776542 111223346688888876321 1267888888887 99999853 57899
Q ss_pred EEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 413 VCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 413 ls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
++++ ..+++++++++++|++++++..+
T Consensus 375 i~~~~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 375 FAPALNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9654 23899999999999999987754
No 126
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.97 E-value=5.7e-30 Score=253.62 Aligned_cols=338 Identities=14% Similarity=0.094 Sum_probs=221.4
Q ss_pred CCCceeeeeccc--ccc--c-HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC-
Q 046900 46 NPSGVIQMGLAE--NQV--S-FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD- 119 (442)
Q Consensus 46 ~~~~~i~l~~~~--n~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~- 119 (442)
....+||++.+. +++ + ++.+.+.+.+..... ..|+...+..+++.++++.+.+.++ ++
T Consensus 40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~------------~~~~~~~~~~~~~~~l~~~la~~~~----~~~ 103 (419)
T 2eo5_A 40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKL------------AHAAANDFYNIPQLELAKKLVTYSP----GNF 103 (419)
T ss_dssp TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTS------------CCCSCSCSCCHHHHHHHHHHHHHSS----CSS
T ss_pred CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhC------------ccccccccCCHHHHHHHHHHHHhCC----CCc
Confidence 345688998876 444 2 355555554432210 1121111223444555555555444 44
Q ss_pred CCcEEEecChHHHHHHHHHhhcC-CCCeEEEcCCCCcChHHhHhhhc-------------CcEEEEEecCCC--CCCc--
Q 046900 120 LNRIVVTAGATAANELLTFILAD-PGDALLVPTPYYPGFDRDLRWRT-------------GIKIVPIHCDSS--NNFQ-- 181 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~-~gd~Vl~~~p~y~~~~~~~~~~~-------------G~~v~~v~~~~~--~~~~-- 181 (442)
+++|++|+|+++++..+++++.. +||.|++.+|+|+++...+.... +.+++.+|.+.. .+|+
T Consensus 104 ~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~ 183 (419)
T 2eo5_A 104 QKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHIN 183 (419)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCC
T ss_pred CCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCcccccccccc
Confidence 78999999999999999987643 48999999999986544322111 125667776432 1112
Q ss_pred ----------CCHHHHH-HHHHHHHhcCCceeEEEEeCCC-CCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 182 ----------ITPQALE-AAYKEAESKDMRVRGVLITNPS-NPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 182 ----------~d~~~l~-~~l~~~~~~~~~~~~v~l~~P~-NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
+|++.|+ +.+++.. ...+++ +++++|+ ||||. +.+.+.+++|+++|++||+++|+||+|.++.+.
T Consensus 184 ~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~-~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~ 261 (419)
T 2eo5_A 184 GYENPSELVNRVIEFIEDYIFVNLV-PPEEVA-GIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRT 261 (419)
T ss_dssp TTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred ccccchhhHHHHHHHHHHHHHhhcc-CCCCEE-EEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccC
Confidence 3678898 8886420 001444 5667885 57896 678888999999999999999999999987665
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHH-HccccCCCcHHHHHHHHHHhcCch
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTAR-RMSSFTLISSQTQYLLASMLSNKK 326 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~-~~~~~~~~s~~~q~~~~~~l~~~~ 326 (442)
+..+ .+. ... ...++ .||||.|| +| +|+||++++++ +. .+. .....+..++++|.++.++++..
T Consensus 262 g~~~-~~~-~~~-----~~~d~---~t~sK~~~-~G~~riG~~~~~~~-~~-~~~~~~~~t~~~n~~~~~aa~aal~~~- 327 (419)
T 2eo5_A 262 GKLF-AIE-NFN-----TVPDV---ITLAKALG-GGIMPIGATIFRKD-LD-FKPGMHSNTFGGNALACAIGSKVIDIV- 327 (419)
T ss_dssp SSSS-GGG-GGT-----CCCSE---EEECGGGG-TTTSCCEEEEEEGG-GC-CC------CCCCCHHHHHHHHHHHHHH-
T ss_pred cchh-hHH-hcC-----CCCCE---EEeccccc-CCccceEEEEEchH-hh-cCCcccCCCCCCCHHHHHHHHHHHHHH-
Confidence 5321 111 111 12333 38999999 69 99999999654 33 333 23334667889999988888631
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC
Q 046900 327 FTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS 406 (442)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~ 406 (442)
+ +.++.++++++++.+.|++. +....+. |+|+|+++.... .... +++.|+++ ||.+.|+.
T Consensus 328 --~----~~~~~~~~~~~~l~~~L~~~-~~~~~~~-g~~~~i~~~~~~-----~~~~-~~~~l~~~-Gv~v~~~~----- 387 (419)
T 2eo5_A 328 --K----DLLPHVNEIGKIFAEELQGL-ADDVRGI-GLAWGLEYNEKK-----VRDR-IIGESFKR-GLLLLPAG----- 387 (419)
T ss_dssp --H----HHHHHHHHHHHHHHHHHTTS-SSEEEEE-TTEEEEECSCHH-----HHHH-HHHHHHHT-TEECEEET-----
T ss_pred --H----HHHHHHHHHHHHHHHHHHHh-hhheEee-eEEEEEEEecCc-----cHHH-HHHHHHHC-CCEEecCC-----
Confidence 2 26778889999999999876 4444444 457788884210 1245 88888765 99999963
Q ss_pred CCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 407 EPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 407 ~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
.+++||+++ ..+++++++++++|++++++
T Consensus 388 -~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 388 -RSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp -TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 468999875 33899999999999998865
No 127
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=1.3e-30 Score=255.80 Aligned_cols=325 Identities=17% Similarity=0.159 Sum_probs=224.0
Q ss_pred CCCCceeeeeccccccc----HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 45 TNPSGVIQMGLAENQVS----FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 45 ~~~~~~i~l~~~~n~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
.....+||++.+.+..+ ++.+.+.+.+....... ....|+. .-..++++.++++++ +
T Consensus 33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--------~~~~~~~-~~~~~l~~~la~~~g----------~ 93 (392)
T 3ruy_A 33 PEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTL--------TSRAFHS-DQLGPWYEKVAKLTN----------K 93 (392)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSC--------CCTTSEE-TTHHHHHHHHHHHHT----------C
T ss_pred CCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccc--------cccccCC-HHHHHHHHHHHHhcC----------C
Confidence 34567899988764432 35555554443211100 0011221 234566666666542 7
Q ss_pred CcEEEecChHHHHHHHHHhhcCC----------CCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCCCC
Q 046900 121 NRIVVTAGATAANELLTFILADP----------GDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDSSN 178 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~----------gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~~~ 178 (442)
+++++|+|+++++..++.++..+ +|.|+++.|+|.++...+....+. ++..++.
T Consensus 94 ~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 169 (392)
T 3ruy_A 94 EMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY---- 169 (392)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT----
T ss_pred CEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc----
Confidence 89999999999999999877644 689999999998766554321111 2444432
Q ss_pred CCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHH-HHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHH
Q 046900 179 NFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSV-LEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAE 257 (442)
Q Consensus 179 ~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~-l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~ 257 (442)
.|+++|++++++ ++++|++++|+||||.+++.++ +++|+++|++||+++|+||+|.++.+.+..+ ....
T Consensus 170 ---~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~ 239 (392)
T 3ruy_A 170 ---GDLEALKAAITP------NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDW 239 (392)
T ss_dssp ---TCHHHHHHHCCT------TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGG
T ss_pred ---ccHHHHHHHhcc------CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhc
Confidence 278999998863 8899999999999999997666 9999999999999999999998876655432 1111
Q ss_pred HHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcc--ccCCCcHHHHHHHHHHhcCchhHHHHHHH
Q 046900 258 ILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMS--SFTLISSQTQYLLASMLSNKKFTENYIKT 334 (442)
Q Consensus 258 ~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 334 (442)
.. ...++ .||||.++ +| +|+||+++ ++.+.+.+.... ..+..+++.+.++.++++... . ++
T Consensus 240 ~~------~~~d~---~~~SK~l~-gG~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~--~~ 303 (392)
T 3ruy_A 240 DN------VTPDM---YILGKALG-GGVFPISCAAA-NRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLE---E--EK 303 (392)
T ss_dssp GT------CCCSE---EEECGGGG-TTTSCCEEEEE-CHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHH---H--TT
T ss_pred cC------CCCCE---EEEchhhh-CChhhhEEEEE-CHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHH---h--hh
Confidence 10 11223 37899986 57 99999999 556655544322 235678889998888887422 1 56
Q ss_pred HHHHHHHHHHHHHHHHHhCC---CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEE
Q 046900 335 NRERLQKRYQMIIEGLRSAG---IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWF 411 (442)
Q Consensus 335 ~~~~~~~~~~~l~~~L~~~g---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~i 411 (442)
.++.++++++++.+.|++.+ +....+.++ |+++.++. +..++++.|+++ ||.+.||. ++++
T Consensus 304 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~-~~~~~~~~--------~~~~l~~~l~~~-gi~v~~~~------~~~i 367 (392)
T 3ruy_A 304 LTERSLQLGEKLVGQLKEIDNPMITEVRGKGL-FIGIELNE--------PARPYCEQLKAA-GLLCKETH------ENVI 367 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTEEEEEEETT-EEEEEESS--------CSHHHHHHHHTT-TEECCCBT------TTEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEeeee-EEEEEEcc--------hHHHHHHHHHHC-CcEEecCC------CCEE
Confidence 67888899999999998874 344455665 55555664 146788888755 99999864 5789
Q ss_pred EEEee-cCCHHHHHHHHHHHHHHH
Q 046900 412 RVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 412 Rls~~-~~~~e~i~~~l~~l~~~l 434 (442)
|++++ ..+++++++++++|++++
T Consensus 368 Ri~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 368 RIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHh
Confidence 99954 238999999999999876
No 128
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.97 E-value=2.5e-30 Score=257.10 Aligned_cols=339 Identities=14% Similarity=0.127 Sum_probs=216.3
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCC----cchHHHHHHHHHHHHHHhCCCCccCCCcE
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDY----HGLKSFRQAMASFMEQIRGGRAKFDLNRI 123 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----~g~~~lr~~ia~~l~~~~~~~~~~~~~~i 123 (442)
.+++.|+.+.+..+++.+.+.+.+..... .. .....|... ....++|+++|++++ +++++|
T Consensus 17 ~~~~~Ld~~~~~~~~~~v~~a~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~~~v 81 (432)
T 3a9z_A 17 NRKVYMDYNATTPLEPEVIQAVTEAMKEA-WG------NPSSSYVAGRKAKDIINTARASLAKMIG--------GKPQDI 81 (432)
T ss_dssp -CCEECBTTTCCCCCHHHHHHHHHHHHHC-CS------CTTCSSHHHHHHHHHHHHHHHHHHHHHT--------CCGGGE
T ss_pred CCcEEeeCCccCCCCHHHHHHHHHHHHHh-cC------CCccCcHHHHHHHHHHHHHHHHHHHHcC--------CCcCeE
Confidence 45678888776654455554444322100 00 001122211 124688888888874 567899
Q ss_pred EEecChHHHHHHHHHhhc--------CCCCeEEEcCCCCcCh-----------------HHhHhhhcCcEEEEEecCCCC
Q 046900 124 VVTAGATAANELLTFILA--------DPGDALLVPTPYYPGF-----------------DRDLRWRTGIKIVPIHCDSSN 178 (442)
Q Consensus 124 ~~t~G~~~ai~~~~~~l~--------~~gd~Vl~~~p~y~~~-----------------~~~~~~~~G~~v~~v~~~~~~ 178 (442)
++|+|+++++.+++.+++ ++||.|+++.|+|..+ ...++ ..|++++.+|++++
T Consensus 82 ~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~-~~g~~v~~v~~~~~- 159 (432)
T 3a9z_A 82 IFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVE-DQVAEVTFVPVSKV- 159 (432)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHH-TTSCEEEEECCCTT-
T ss_pred EEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHH-hcCcEEEEEecCcc-
Confidence 999999999999999886 5899999999999876 22233 36999999998752
Q ss_pred CCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcC----------cEEEEeccCCcCCCC
Q 046900 179 NFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN----------IHLVSDEIYSGSAFS 248 (442)
Q Consensus 179 ~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~----------~~vi~De~y~~~~~~ 248 (442)
++.+|++.|++.+++ ++++|++++|+||||.+++ +++|.++|++++ ++||+||+|+...
T Consensus 160 ~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~-- 228 (432)
T 3a9z_A 160 NGQVEVEDILAAVRP------TTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK-- 228 (432)
T ss_dssp TSSCCHHHHHHTCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT--
T ss_pred cCCcCHHHHHHhccC------CceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC--
Confidence 346899999988764 7899999999999999999 456788888998 9999999997532
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHH---------HccccCCCcHHHHHHHH
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR---------RMSSFTLISSQTQYLLA 319 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~---------~~~~~~~~s~~~q~~~~ 319 (442)
...++.... .. +++.|+||.+| .|+||++++++.....+. .....+..+.+.+.++.
T Consensus 229 --~~~~~~~~~--------~d-~~~~s~~K~~g---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 294 (432)
T 3a9z_A 229 --RRVDVEDLG--------VD-FLTIVGHKFYG---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLG 294 (432)
T ss_dssp --SCCCHHHHC--------CS-EEEEEGGGTTC---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHH
T ss_pred --cccChhhcC--------CC-EEEEehhHhcC---CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHH
Confidence 223443331 22 56899999775 469999996543111111 11122455677777766
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee--cC-----CceEEEEEecCCcccccChhhHHHHHHHHHH
Q 046900 320 SMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECL--KG-----NAGLFCWMNLSPLLEEQTREGELALWDSMLH 391 (442)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~-----~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 391 (442)
++++ +..+++++.++.++++++++.+.|++. |+++. .+ ..+..+++.++.... +..++.+.+
T Consensus 295 aal~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l-- 364 (432)
T 3a9z_A 295 KAAD---LVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQL-----RGYMVLAQC-- 364 (432)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTC-----CHHHHHHHC--
T ss_pred HHHH---HHHhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCC-----cHHHHHHHh--
Confidence 6665 224467788899999999999999874 65443 22 123345555554210 134454443
Q ss_pred cCcEEEeCCCCCCCC------------------CCCEEEEEeecC-CHHHHHHHHHHHHHHHHHHHh
Q 046900 392 EVKLNISPGSSCHCS------------------EPGWFRVCFANM-SEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 392 ~~gi~v~pg~~f~~~------------------~~~~iRls~~~~-~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.|+.+.+|..|... ..+++||+++.. +++++++++++|++++++.++
T Consensus 365 -~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 365 -QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp -SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred -cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 38888887665321 137899999832 799999999999999987654
No 129
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.97 E-value=6.7e-30 Score=253.11 Aligned_cols=332 Identities=14% Similarity=0.128 Sum_probs=223.5
Q ss_pred CCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 45 TNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 45 ~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
.....+|||+.+. +++ +++.+.+.+.+....... ....| ..++++++++.+.+..+ .
T Consensus 54 ~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~--------~~~~~-----~~~~~~~l~~~la~~~g------~ 114 (420)
T 2pb2_A 54 QQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWH--------TSNVF-----TNEPALRLGRKLIDATF------A 114 (420)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCC--------CCTTS-----CCHHHHHHHHHHHHHSS------C
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhccc--------ccCcc-----CCHHHHHHHHHHHhhCC------C
Confidence 3456789998763 444 345555555543221000 00112 23556666666665533 5
Q ss_pred CcEEEecChHHHHHHHHHhhcC-------CC-CeEEEcCCCCcChHHhHhhhcCcE------------EEEEecCCCCCC
Q 046900 121 NRIVVTAGATAANELLTFILAD-------PG-DALLVPTPYYPGFDRDLRWRTGIK------------IVPIHCDSSNNF 180 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~~G~~------------v~~v~~~~~~~~ 180 (442)
++|++|+|+++++..+++++.. +| +.|++.+|+|.++...+....|.+ +..+|.
T Consensus 115 ~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~------ 188 (420)
T 2pb2_A 115 ERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF------ 188 (420)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT------
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC------
Confidence 8999999999999999998865 67 599999999987654332124543 445542
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHH
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEIL 259 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~ 259 (442)
.|+++|++.+++ ++++|++++++|++|. +++.+.+++|.++|++||+++|+||+|.++.+.+..+ .. +..
T Consensus 189 -~d~~~le~~i~~------~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~-~~~ 259 (420)
T 2pb2_A 189 -NDLHAVKAVMDD------HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AY-MHY 259 (420)
T ss_dssp -TCHHHHHHHCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HH-HHH
T ss_pred -CCHHHHHHHhcc------CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HH-Hhc
Confidence 278999988864 7888888777888884 6999999999999999999999999998876655422 22 111
Q ss_pred hhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHH
Q 046900 260 EARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRE 337 (442)
Q Consensus 260 ~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 337 (442)
. ...+++ ||||.+| +|+|+||++++ +.+.+.+.. ....+..++++|.++.+.|+.... ++..+
T Consensus 260 ~-----~~~dii---t~sK~l~-~G~~iG~~~~~-~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~-----~~~~~ 324 (420)
T 2pb2_A 260 G-----VTPDIL---TSAKALG-GGFPVSAMLTT-QEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT-----PEVLQ 324 (420)
T ss_dssp T-----CCCSEE---EECGGGG-TTSCCEEEEEC-HHHHTTCC----CCEECCCHHHHHHHHHHHHHHSS-----HHHHH
T ss_pred C-----CCCCeE---Eeccccc-CCCceEEEEEh-HHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh-----ccHHH
Confidence 1 013333 7899999 99999999994 555554433 223356788888888777763221 23455
Q ss_pred HHHHHHHHHHHHHHhC--C---CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEE
Q 046900 338 RLQKRYQMIIEGLRSA--G---IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFR 412 (442)
Q Consensus 338 ~~~~~~~~l~~~L~~~--g---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iR 412 (442)
.++++++++.+.|++. + +....+. |+|+|++++.... .+..++++.|+++ ||.+.|+. ++++|
T Consensus 325 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~v~~~~~~~----~~~~~l~~~l~~~-Gi~v~~~~------~~~iR 392 (420)
T 2pb2_A 325 GIHTKRQQFVQHLQAIDEQFDIFSDIRGM-GLLIGAELKPKYK----GRARDFLYAGAEA-GVMVLNAG------ADVMR 392 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEE-TTEEEEEECGGGT----TCHHHHHHHHHHT-TEECEESS------TTEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEec-ceEEEEEECCCch----HHHHHHHHHHHHC-CCEEEeCC------CCEEE
Confidence 6666677777777653 2 2223344 5578888864210 0256788888875 99999863 46899
Q ss_pred EEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 413 VCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 413 ls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
|+++ ..+++++++++++|++++++.
T Consensus 393 l~~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 393 FAPSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9975 348999999999999998764
No 130
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.97 E-value=1.8e-30 Score=255.06 Aligned_cols=326 Identities=15% Similarity=0.120 Sum_probs=219.7
Q ss_pred CCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 46 NPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 46 ~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
.+..+|||+.+. +++ +++.+.+.+.+...... .....| +.....++++.+++++ + ++++
T Consensus 43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~--------~~~~~~-~~~~~~~l~~~la~~~----~----~~~~ 105 (395)
T 1vef_A 43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLM--------AMPQTL-PTPMRGEFYRTLTAIL----P----PELN 105 (395)
T ss_dssp TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCC--------CCCTTS-CCHHHHHHHHHHHHTS----C----TTEE
T ss_pred CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCC--------CCcccc-CCHHHHHHHHHHHHhc----C----CCcC
Confidence 345678998775 444 33444444443321100 001124 2234456666666653 2 4678
Q ss_pred cEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcCh-HHhHhhhcCcE------------EEEEecCCCCCCcCCHHH
Q 046900 122 RIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGF-DRDLRWRTGIK------------IVPIHCDSSNNFQITPQA 186 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~-~~~~~~~~G~~------------v~~v~~~~~~~~~~d~~~ 186 (442)
+|++|+|+++++.+++.++. .+||.|++.+|+|+.. ...+.. .|.+ +..++. .|+++
T Consensus 106 ~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~-------~d~~~ 177 (395)
T 1vef_A 106 RVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSV-TWEPKYREPFLPLVEPVEFIPY-------NDVEA 177 (395)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHT-CCCHHHHGGGCSCSSCEEEECT-------TCHHH
T ss_pred EEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhh-cCCcccccccCCCCCCeeEeCC-------CcHHH
Confidence 99999999999999998764 5789999999999764 345553 5664 333321 47899
Q ss_pred HHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCC
Q 046900 187 LEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYK 265 (442)
Q Consensus 187 l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~ 265 (442)
|++.+++ ++++|+++.++||||.++ +.+++++|+++|++||++||+||+|+++.+.+..+ ++. ....
T Consensus 178 l~~~i~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~-~~~~---- 245 (395)
T 1vef_A 178 LKRAVDE------ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFE-HFGI---- 245 (395)
T ss_dssp HHHHCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THH-HHTC----
T ss_pred HHHHhcc------CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-Hhh-hcCC----
Confidence 9988863 677766555578999875 68889999999999999999999999755444321 221 1110
Q ss_pred CCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 046900 266 DSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRY 343 (442)
Q Consensus 266 ~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 343 (442)
...++ ||||.++ +|+|+||++++ +.+.+.+.. ....+..+++.+.++.+.++.. .+ ....+.+++++
T Consensus 246 -~~d~~---s~sK~~~-~g~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~---~~--~~~~~~~~~~~ 314 (395)
T 1vef_A 246 -VPDIL---TLAKALG-GGVPLGVAVMR-EEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYL---ER--TRLWERAAELG 314 (395)
T ss_dssp -CCSEE---EECGGGG-TTSSCEEEEEE-HHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHH---HH--HTTHHHHHHHH
T ss_pred -CCCEE---EEccccc-CCCceEEEEeh-HHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHH
Confidence 12232 8899998 59999999995 445554443 2223456788888877777532 11 34567788888
Q ss_pred HHHHHHHHhCCCee--ecCCceEEEEEecCCcccccChhhHHHHHHHHH-HcCcEEEeCCCCCCCCCCCEEEEEee-cCC
Q 046900 344 QMIIEGLRSAGIEC--LKGNAGLFCWMNLSPLLEEQTREGELALWDSML-HEVKLNISPGSSCHCSEPGWFRVCFA-NMS 419 (442)
Q Consensus 344 ~~l~~~L~~~g~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~gi~v~pg~~f~~~~~~~iRls~~-~~~ 419 (442)
+++.+.|++.+.++ ..+..|+++|++++.. ..++++.|+ ++ ||.+.|+ +++++||+++ ..+
T Consensus 315 ~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~l~~~l~~~~-gi~v~~~------~~~~iRi~~~~~~~ 379 (395)
T 1vef_A 315 PWFMEKLRAIPSPKIREVRGMGLMVGLELKEK--------AAPYIARLEKEH-RVLALQA------GPTVIRFLPPLVIE 379 (395)
T ss_dssp HHHHHHHHTSCCTTEEEEEEETTEEEEEESSC--------SHHHHHHHHHHH-CEECEES------STTEEEECCCTTCC
T ss_pred HHHHHHHHHhhcCceEEEEEEEEEEEEEEcCh--------HHHHHHHHHHHC-CeEEecC------CCCEEEEeCCCCCC
Confidence 89999998775432 1234456889988741 457888888 55 9999985 2578999876 348
Q ss_pred HHHHHHHHHHHHHHH
Q 046900 420 EQTLEVALKRIHNFM 434 (442)
Q Consensus 420 ~e~i~~~l~~l~~~l 434 (442)
++++++++++|++++
T Consensus 380 ~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 380 KEDLERVVEAVRAVL 394 (395)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 131
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.97 E-value=1.2e-29 Score=253.65 Aligned_cols=363 Identities=11% Similarity=0.061 Sum_probs=224.2
Q ss_pred CCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+|||+.+ .+.++ ++.+.+.+.+... ....|....+..+++.++++++.+..+. -.
T Consensus 60 d~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~------------~~~~~~~~~~~~~~~~~la~~l~~~~~~---~~ 124 (453)
T 4ffc_A 60 DADGNSFIDLGAGIAVTTVGASHPAVAAAIADQAT------------HFTHTCFMVTPYEQYVQVAELLNALTPG---DH 124 (453)
T ss_dssp ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHH------------HCSCCTTTTSCCHHHHHHHHHHHHHSSC---SS
T ss_pred eCCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHH------------hccccccCcCCCHHHHHHHHHHHHhCCC---CC
Confidence 3445678999876 45553 3555554443321 1123433345567777888888776431 12
Q ss_pred CCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcC-------------cEEEEEecCC--CCCCcC
Q 046900 120 LNRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTG-------------IKIVPIHCDS--SNNFQI 182 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G-------------~~v~~v~~~~--~~~~~~ 182 (442)
.++|++|+|+++++..+++.+.. .++.|++.+++|.++...+....| ..+..+|... .+.+..
T Consensus 125 ~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 204 (453)
T 4ffc_A 125 DKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGL 204 (453)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTC
T ss_pred CcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCcccc
Confidence 57999999999999999977642 458999999999887655432111 1344444431 112223
Q ss_pred C-HHHHHHHHHHHHhc-CCceeEEEEeCCCCCCC--cCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHH
Q 046900 183 T-PQALEAAYKEAESK-DMRVRGVLITNPSNPLG--ATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEI 258 (442)
Q Consensus 183 d-~~~l~~~l~~~~~~-~~~~~~v~l~~P~NPtG--~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~ 258 (442)
+ .+.++..+...... ..+..++++++|.||+| .+.+.+.+++|.++|++||+++|+||+|.++.+.+.. ......
T Consensus 205 ~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~a~~~~ 283 (453)
T 4ffc_A 205 TGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAW-FASEHE 283 (453)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccccc-chhhhc
Confidence 3 22232222111100 12445778888988776 4457788999999999999999999999987665542 222211
Q ss_pred HhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHH
Q 046900 259 LEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSNKKFTENYIKTNR 336 (442)
Q Consensus 259 ~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 336 (442)
+.+..+.||||+++ .|+|+||+++ ++.+.+.+.. ....+..++++|.++.+.++.... ++++++.+
T Consensus 284 ---------~~~pdi~t~sK~~~-~G~~~G~~~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~ 351 (453)
T 4ffc_A 284 ---------GIVPDIVTMAKGIA-GGMPLSAVTG-RAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRE-LDLPARAR 351 (453)
T ss_dssp ---------TCCCSEEEECGGGG-TTSSCEEEEE-EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHH
T ss_pred ---------CCCcchHhhhhhhc-CCcCeEEEEE-CHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhh-hhHHHHHH
Confidence 11222458999998 5999999998 5666655543 233466788999988888763211 11233333
Q ss_pred HHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcc-cccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEe
Q 046900 337 ERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLL-EEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCF 415 (442)
Q Consensus 337 ~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~ 415 (442)
+.....++.+.+.+.+.......+..|+|+|+++.... .........+++..|+++ ||.+.|+..| .+++|+++
T Consensus 352 ~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~----~~~iRi~~ 426 (453)
T 4ffc_A 352 AIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQ-GVLILTCGTF----GNVIRLLP 426 (453)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHT-TEECCEECTT----SCEEEECC
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEEecCcccCCCHHHHHHHHHHHHhC-CCEEecCCCC----CCEEEEEC
Confidence 33333344444444444322222333568888774310 001122467788888777 9999997654 35899987
Q ss_pred e-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 416 A-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 416 ~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+ ..+++++++++++|++++++..+
T Consensus 427 ~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (453)
T 4ffc_A 427 PLVIGDDLLDEGITALSDIIRAKAS 451 (453)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 6 33899999999999999987654
No 132
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.97 E-value=2.6e-29 Score=246.86 Aligned_cols=332 Identities=13% Similarity=0.081 Sum_probs=220.8
Q ss_pred CCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 46 NPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 46 ~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
....+|||+.+ .++++ ++.+.+.+.+..... ...| ..+..++++++++++.+..+ ++
T Consensus 34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-----------~~~~--~~~~~~~~~~l~~~la~~~~------~~ 94 (395)
T 3nx3_A 34 KAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKL-----------LHTS--NLYYNENIAAAAKNLAKASA------LE 94 (395)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTC-----------SCCC--TTSBCHHHHHHHHHHHHHHT------CS
T ss_pred CCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhc-----------cccc--cccCCHHHHHHHHHHHHhcC------CC
Confidence 45678999987 45553 355555555432210 0111 11234666666666666543 68
Q ss_pred cEEEecChHHHHHHHHHhhc-------CCCCeEEEcCCCCcChHHhHhhhc------------CcEEEEEecCCCCCCcC
Q 046900 122 RIVVTAGATAANELLTFILA-------DPGDALLVPTPYYPGFDRDLRWRT------------GIKIVPIHCDSSNNFQI 182 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~-------~~gd~Vl~~~p~y~~~~~~~~~~~------------G~~v~~v~~~~~~~~~~ 182 (442)
+|++|+|+++++..+++++. .++|.|++.+|+|.++...+.... +.++..++. .
T Consensus 95 ~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 167 (395)
T 3nx3_A 95 RVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------N 167 (395)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------T
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------C
Confidence 99999999999999988775 457999999999987654333111 234555543 2
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhh
Q 046900 183 TPQALEAAYKEAESKDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEA 261 (442)
Q Consensus 183 d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~ 261 (442)
|+++|++++++ ++++++++.++|++|.+ .+.+.+++|.++|++||+++|+||+|.++...+..+ .....
T Consensus 168 d~~~l~~~l~~------~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~--- 237 (395)
T 3nx3_A 168 DISSVEKLVNE------KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AYEHA--- 237 (395)
T ss_dssp CHHHHHTTCCT------TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGG---
T ss_pred CHHHHHHhccC------CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hHHhc---
Confidence 78999988753 67788877777777766 678889999999999999999999999875544322 11111
Q ss_pred hcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHH-HHHHHHc--cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 046900 262 RQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKV-VTTARRM--SSFTLISSQTQYLLASMLSNKKFTENYIKTNRER 338 (442)
Q Consensus 262 ~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~-~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 338 (442)
+....+.||||.++ .|+|+||+++ ++.+ .+.+... ...+..+++++.++.+.++.... +++.++.++.
T Consensus 238 ------~~~~d~~t~sK~~~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~-~~~~~~~~~~ 308 (395)
T 3nx3_A 238 ------QILPDIMTSAKALG-CGLSVGAFVI-NQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKE-EKILENVNKL 308 (395)
T ss_dssp ------TCCCSEEEECGGGT-TTSCCEEEEE-CHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHH-TTHHHHHHHH
T ss_pred ------CCCCCEEEeccccc-CCCceEEEEE-chhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHh-hHHHHHHHHH
Confidence 11222458999998 6999999999 4555 6665543 23356788888888887763211 1223333444
Q ss_pred HHHHHHHHHHHHHhCC-CeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-
Q 046900 339 LQKRYQMIIEGLRSAG-IECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA- 416 (442)
Q Consensus 339 ~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~- 416 (442)
.+..++.+.+.+.+.. +....+ .|+|+|+.++... +..++++.|+++ ||.+.|+. ++++||+++
T Consensus 309 ~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~------~~~~~~~~l~~~-Gi~v~~~~------~~~iRi~~~~ 374 (395)
T 3nx3_A 309 TPYLEQSLDELINEFDFCKKRKG-LGFMQGLSLDKSV------KVAKVIQKCQEN-ALLLISCG------ENDLRFLPPL 374 (395)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEE-ETTEEEEEECTTS------CHHHHHHHHHHT-TEECEEET------TTEEEECCCT
T ss_pred HHHHHHHHHHHHHhCCCeEEEEe-EEEEEEEEeCCcc------hHHHHHHHHHHC-CCEEecCC------CCEEEEECCC
Confidence 4444445544444443 333333 3558888887531 256788888777 99999863 578999865
Q ss_pred cCCHHHHHHHHHHHHHHHHH
Q 046900 417 NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 417 ~~~~e~i~~~l~~l~~~l~~ 436 (442)
..+++++++++++|++++++
T Consensus 375 ~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 375 ILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp TCCHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 23899999999999998763
No 133
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=3.7e-30 Score=249.47 Aligned_cols=301 Identities=15% Similarity=0.119 Sum_probs=206.9
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCe--EEEcCCCCcChHH--hH-hh
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDA--LLVPTPYYPGFDR--DL-RW 163 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~--Vl~~~p~y~~~~~--~~-~~ 163 (442)
..|.+..+..+|+++++++++ .+..++++|+++++.+++.+++.+||. |+++.++|..+.. .+ .
T Consensus 42 ~~~~~~~~~~~l~~~la~~~~----------~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~- 110 (359)
T 3pj0_A 42 DIYGNGAVIEDFETKIAKILG----------KQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKE- 110 (359)
T ss_dssp CBTTBSHHHHHHHHHHHHHHT----------CSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHH-
T ss_pred CcccCCHHHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcchHHH-
Confidence 356666678999999999875 222355578889999999999888886 5555555443221 12 3
Q ss_pred hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC-CcCCCHHHHHHHHHHHHhcCcEEEEeccC
Q 046900 164 RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPL-GATIQRSVLEELLDFATRKNIHLVSDEIY 242 (442)
Q Consensus 164 ~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPt-G~~~~~~~l~~l~~~~~~~~~~vi~De~y 242 (442)
..|++++.++.+ ++.+|+++|+++ . .++++|+++||+||| |.+++.+++++|+++|++||++||+|++|
T Consensus 111 ~~g~~~~~v~~~---~~~~d~~~l~~~-~------~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~ 180 (359)
T 3pj0_A 111 LQQITPLLLGTA---NQLLTIDDIKSL-R------EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGAR 180 (359)
T ss_dssp HHCCEEEECSCT---TSCCCHHHHHTC-S------SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETT
T ss_pred hcCceEEecCCc---CCCcCHHHHHhc-c------CCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcc
Confidence 379999998863 457999999886 2 378999999999998 79999999999999999999999999998
Q ss_pred CcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc----CCCcHHHHHHH
Q 046900 243 SGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF----TLISSQTQYLL 318 (442)
Q Consensus 243 ~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~----~~~s~~~q~~~ 318 (442)
..+.... ...+...+... .+ +++.|+||.++.++ . ||+++ ++.+.+.++..... .....+.+.++
T Consensus 181 ~~~~~~~-~~~~~~~~~~~-----~d--~~~~s~sK~~~~~~-g-g~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~a~ 249 (359)
T 3pj0_A 181 LWEITPF-YQKSAEEICAL-----FD--SVYVSFYKGIGGIA-G-AILAG-NDDFVQEAKIWKRRYGGDLISLYPYILSA 249 (359)
T ss_dssp CGGGHHH-HTCCHHHHHTT-----CS--EEEEESSSTTCCSS-C-EEEEE-CHHHHHHHHHHHHHTTCCCSCCHHHHHHH
T ss_pred hhcchhh-hCCCHHHhhcc-----CC--EEEEeccccCCCcc-e-EEEEC-CHHHHHHHHHHHHHhCCCcchhHHHHHHH
Confidence 7533110 01133333321 12 44569999987553 2 77777 66676666543211 11122222222
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee-cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEE
Q 046900 319 ASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECL-KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLN 396 (442)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~ 396 (442)
...+ +.+. +..+.+.++++++.+.|+++ |+++. .+.+++++|++++.... .+..++.+.|.++ ||.
T Consensus 250 ~~~l------~~~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~-GV~ 317 (359)
T 3pj0_A 250 DYYF------EKRI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSAD----EIGAILTKIQDET-GVG 317 (359)
T ss_dssp HHHH------HHHG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHH----HHHHHHHHHHHHH-CEE
T ss_pred HHHH------HHHH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccc----hhHHHHHHHHHhc-CcE
Confidence 2222 2222 23345677888999999987 88885 45666688888764211 1356777777666 999
Q ss_pred EeCCCCCCCCCCCEEEEEee----cCCHHHHHHHHHHHHHH
Q 046900 397 ISPGSSCHCSEPGWFRVCFA----NMSEQTLEVALKRIHNF 433 (442)
Q Consensus 397 v~pg~~f~~~~~~~iRls~~----~~~~e~i~~~l~~l~~~ 433 (442)
+.||..|+..+.+++|++++ ..+.+++++++++|.+.
T Consensus 318 v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 318 ISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp CCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred ecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 99998887555678999886 23789999999999875
No 134
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.97 E-value=6.4e-30 Score=251.63 Aligned_cols=325 Identities=16% Similarity=0.222 Sum_probs=229.7
Q ss_pred CceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEec
Q 046900 48 SGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 48 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
.++|||+.+.++++ +.+.+.+.+... ...|.+..+..++|++++++++ .+++++++
T Consensus 30 ~~~id~~~~~~~~~-~~v~~a~~~~~~-------------~~~y~~~~~~~~l~~~la~~~~----------~~~~v~~~ 85 (399)
T 2oga_A 30 VPFLDLKAAYEELR-AETDAAIARVLD-------------SGRYLLGPELEGFEAEFAAYCE----------TDHAVGVN 85 (399)
T ss_dssp BCSCCHHHHHHHTH-HHHHHHHHHHHH-------------HTCCSSSHHHHHHHHHHHHHTT----------SSEEEEES
T ss_pred CcccccCcCCCCCC-HHHHHHHHHHHh-------------cCCCCCchhHHHHHHHHHHHHC----------CCeEEEec
Confidence 36789999888776 444444443321 1246556788999999999975 22677788
Q ss_pred ChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEE
Q 046900 128 GATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLI 206 (442)
Q Consensus 128 G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 206 (442)
|+++++..++.++ +++||.|+++.|+|+.+...++. .|++++.++++++ ++.+|++.|++.+++ ++++|+
T Consensus 86 ~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~- 156 (399)
T 2oga_A 86 SGMDALQLALRGLGIGPGDEVIVPSHTYIASWLAVSA-TGATPVPVEPHED-HPTLDPLLVEKAITP------RTRALL- 156 (399)
T ss_dssp CHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHH-TTCEEEEECBCSS-SSSBCHHHHHHHCCT------TEEEEC-
T ss_pred CHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHH-CCCEEEEEecCCC-CCCcCHHHHHHhcCC------CCeEEE-
Confidence 8899999999999 89999999999999999998885 8999999998753 577999999998864 677666
Q ss_pred eCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC-CCCCCcccHHHHHhhhcCCCCCcEEEEecC--cccCCCC
Q 046900 207 TNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA-FSSSEFVSIAEILEARQYKDSERVHIVYSL--SKDLGLP 283 (442)
Q Consensus 207 ~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~-~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~--SK~~g~~ 283 (442)
|+||||.+.+ +++|.++|+++|++||+||+|+.+. +++.. + . . . ..+++.|+ ||.+|.+
T Consensus 157 --~~n~tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~---~-~-----~-~di~~~S~~~sK~~~~~ 218 (399)
T 2oga_A 157 --PVHLYGHPAD---MDALRELADRHGLHIVEDAAQAHGARYRGRR---I---G-A-----G-SSVAAFSFYPGKNLGCF 218 (399)
T ss_dssp --CBCGGGCCCC---HHHHHHHHHHHTCEECEECTTCTTCEETTEE---T---T-C-----T-TCEEEEECCTTSSSCCS
T ss_pred --EeCCcCCccC---HHHHHHHHHHcCCEEEEECcccccCccCCee---c---c-c-----c-cCEEEEeCCCCccCCcC
Confidence 6789999987 7888899999999999999998653 22211 1 0 0 0 13678888 7999977
Q ss_pred CceeEEEeecCHHHHHHHHHcccc--------------CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Q 046900 284 GFRVGTIYSYNDKVVTTARRMSSF--------------TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEG 349 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~~~--------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 349 (442)
| |+||++++++.+.+.++..... +..+++.+.++.+.++. +++..+..++.++++.+.
T Consensus 219 G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-------~~~~~~~~~~~~~~l~~~ 290 (399)
T 2oga_A 219 G-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-------LDSWNGRRSALAAEYLSG 290 (399)
T ss_dssp S-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHH
T ss_pred C-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence 9 9999999667776665543221 23456666665555543 222334445567778888
Q ss_pred HHhC-CCeee-cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCC-----------CC---C------
Q 046900 350 LRSA-GIECL-KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCH-----------CS---E------ 407 (442)
Q Consensus 350 L~~~-g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~-----------~~---~------ 407 (442)
|.+. |+++. .+.++.++|+.++-... +..++.+.|.++ ||.+.++.... .. .
T Consensus 291 L~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 364 (399)
T 2oga_A 291 LAGLPGIGLPVTAPDTDPVWHLFTVRTE-----RRDELRSHLDAR-GIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESF 364 (399)
T ss_dssp TTTCTTCBCCCCCTTEECCCSSEEEECS-----SHHHHHHHHHHT-TBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHH
T ss_pred hccCCCccccCCCCCCcceeEEEEEECC-----CHHHHHHHHHHC-CCceecCCCCccccchhhcccCCCCCCChhHHHH
Confidence 8876 66654 34455666533321101 256788888765 99998753110 00 0
Q ss_pred -CCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 408 -PGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 408 -~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.+++||++. ..++++++++++.|++++++.
T Consensus 365 ~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 365 ARQVLSLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp HHHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred HhCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 257999986 348999999999999988653
No 135
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.97 E-value=2.4e-29 Score=250.19 Aligned_cols=311 Identities=14% Similarity=0.134 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhh------------
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWR------------ 164 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~------------ 164 (442)
+++.++++.+.+.++ .++++|++|+|+++++..+++++. ..+|.|++.+|+|+++...+...
T Consensus 85 ~~~~~l~~~la~~~~----~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 160 (433)
T 1zod_A 85 RPVVDLATRLANITP----PGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPA 160 (433)
T ss_dssp HHHHHHHHHHHHHSC----TTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCC
T ss_pred HHHHHHHHHHHHhCC----CCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCC
Confidence 445555555555443 467899999999999999988653 24589999999998765432211
Q ss_pred -cCcEEEEEecCCCCCCc--------CCHHHHHHHHHHHHhcCCceeEEEEeCCC-CCCCc-CCCHHHHHHHHHHHHhcC
Q 046900 165 -TGIKIVPIHCDSSNNFQ--------ITPQALEAAYKEAESKDMRVRGVLITNPS-NPLGA-TIQRSVLEELLDFATRKN 233 (442)
Q Consensus 165 -~G~~v~~v~~~~~~~~~--------~d~~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~-~~~~~~l~~l~~~~~~~~ 233 (442)
.|+..++++......|. +|++.|++.+++. ...+++ +++++|+ ||||. +.+.+.+++|+++|++||
T Consensus 161 ~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~-~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~ 237 (433)
T 1zod_A 161 AVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLA-AFIAEPILSSGGIIELPDGYMAALKRKCEARG 237 (433)
T ss_dssp CTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEE-EEEECSEETTTTCEECCTTHHHHHHHHHHHHT
T ss_pred CCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc--CCCCeE-EEEEccccCCCCcccCCHHHHHHHHHHHHHhC
Confidence 24444444422111222 3689999988752 112454 5666774 88996 568888999999999999
Q ss_pred cEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--cc--ccCC
Q 046900 234 IHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MS--SFTL 309 (442)
Q Consensus 234 ~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~--~~~~ 309 (442)
+++|+||+|.++.+.+.. ..+. ...- ... +.||||.|| .|+|+||+++ ++.+.+.+.. .. ..+.
T Consensus 238 ~~li~DEv~~~~g~~g~~-~~~~-~~~~-----~~d---i~s~sK~~~-~G~~ig~~~~-~~~~~~~~~~~~~~~~~t~~ 305 (433)
T 1zod_A 238 MLLILDEAQTGVGRTGTM-FACQ-RDGV-----TPD---ILTLSKTLG-AGLPLAAIVT-SAAIEERAHELGYLFYTTHV 305 (433)
T ss_dssp CEEEEECTTTTTTTTSSS-STHH-HHTC-----CCS---EEEECHHHH-TTSSCEEEEE-CHHHHHHHHHTTCCCCCTTT
T ss_pred CEEEEeccccCCCcCchH-hHHh-hcCC-----CCC---EEEeccccc-CCCCeeEEEE-hHHHHHhhccCCCCCCCCCC
Confidence 999999999987655532 2222 1110 122 348999998 5999999999 5666666654 22 3355
Q ss_pred CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh----CC-CeeecCCceEEEEEecCCccc--ccChhhH
Q 046900 310 ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS----AG-IECLKGNAGLFCWMNLSPLLE--EQTREGE 382 (442)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g-~~~~~~~~g~~~~~~~~~~~~--~~~~~~~ 382 (442)
.++++|.++.++++... + ....++++++++++.+.|++ .. +....+. |+|+|++++.... .......
T Consensus 306 ~~~~~~~a~~aal~~~~---~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~ 379 (433)
T 1zod_A 306 SDPLPAAVGLRVLDVVQ---R--DGLVARANVMGDRLRRGLLDLMERFDCIGDVRGR-GLLLGVEIVKDRRTKEPADGLG 379 (433)
T ss_dssp TCHHHHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEEEETTTTEECTTHH
T ss_pred cCHHHHHHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCChHHH
Confidence 68888888777775211 1 11234444455555555544 22 2333444 4577888754210 0001235
Q ss_pred HHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 383 LALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 383 ~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.++++.|+++ ||.+.||..|+ .++++||+++ ..+++++++++++|++++++.
T Consensus 380 ~~~~~~l~~~-Gv~v~~~~~~~--~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 380 AKITRECMNL-GLSMNIVQLPG--MGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp HHHHHHHHHT-TEECCEECCTT--SCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC-CCeEeccCCCC--CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 6788888866 99999998764 3579999865 348999999999999988753
No 136
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.97 E-value=5.9e-30 Score=247.91 Aligned_cols=324 Identities=12% Similarity=0.073 Sum_probs=218.3
Q ss_pred eecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHH
Q 046900 53 MGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAA 132 (442)
Q Consensus 53 l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~a 132 (442)
|+.+.++...+.+.+.+...... .....|++..+..+|+++++++++ . +..++++|++++
T Consensus 15 l~~~~~p~~~~~~~~~~~~~~~~----------~~~~~y~~~~~~~~l~~~la~~~~--------~--~~~i~~~~G~~a 74 (357)
T 3lws_A 15 QISGHGKRNVGVLKTAFAAVADE----------MASDQYGTGAIIEPFEQKFADVLG--------M--DDAVFFPSGTMA 74 (357)
T ss_dssp ESSBSSCCBHHHHHHHHTTSCTT----------CBCEETTEETTHHHHHHHHHHHHT--------C--SEEEEESCHHHH
T ss_pred cccCCCCCCHHHHHHHHHHhhcc----------cCcccccCChHHHHHHHHHHHHhC--------C--CcEEEecCcHHH
Confidence 45555555555555555442100 123457766788999999999975 2 333455777889
Q ss_pred HHHHHHhhcCCCC--eEEEcCCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe
Q 046900 133 NELLTFILADPGD--ALLVPTPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT 207 (442)
Q Consensus 133 i~~~~~~l~~~gd--~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~ 207 (442)
+.+++.+++.+|| .|+++.++|..... ... ..|++++.++.+ ++.+|+++|+++ .++++++++
T Consensus 75 ~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~---~~~~d~~~l~~~--------~~~~~v~~~ 142 (357)
T 3lws_A 75 QQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKE-LHPIETILVGAA---DRLMTLDEIKAL--------PDIACLLLE 142 (357)
T ss_dssp HHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHH-HSSCEEEECSCT---TSCCCHHHHHTC--------CSCSEEEEE
T ss_pred HHHHHHHHhhcCCCcEEEecccceeeeeccchhhh-ccCcEEEEecCC---CCCcCHHHHhcC--------cCcceEEEE
Confidence 9999999988888 67777766543322 234 379999888843 346899999876 147899999
Q ss_pred CCCCCC-CcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC--CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 208 NPSNPL-GATIQRSVLEELLDFATRKNIHLVSDEIYSGS--AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 208 ~P~NPt-G~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~--~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
+|+||| |.+++.+++++|+++|++||++||+||+|... .+.+ .+...+... .+ +++.|+||.++.++
T Consensus 143 ~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~~~-----~d--~~~~s~sK~~~~~~ 212 (357)
T 3lws_A 143 LPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE---KTAAEIAGL-----FD--SIYISFYKGLGGIA 212 (357)
T ss_dssp SSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT---CCHHHHHTT-----SS--EEEEESSSTTCCSS
T ss_pred cccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC---CChHHHHhc-----CC--EEEEeccccCCCCc
Confidence 999998 99999999999999999999999999998621 1112 233333321 23 34789999994233
Q ss_pred ceeEEEeecCHHHHHHHHHcccc----CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee-
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSF----TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECL- 358 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~- 358 (442)
. ||+++ ++.+.+.+.+.... .....+.+.++...++. +.+.. +.+.++++++.+.|++. |+++.
T Consensus 213 g--g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~-~~~~~~~~~l~~~L~~~~g~~~~~ 282 (357)
T 3lws_A 213 G--AILAG-PAAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL------RKDRM-GQYYEQAKQLAEQFNALPGVHTTP 282 (357)
T ss_dssp C--EEEEE-CHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH------HTTCH-HHHHHHHHHHHHHHHTSTTEEEES
T ss_pred e--EEEEc-CHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH------HHHHH-HHHHHHHHHHHHHHHhCCCCeecc
Confidence 2 99988 56666665543221 11123333333333321 22222 34577788999999987 88874
Q ss_pred cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec----CCHHHHHHHHHHHHHHH
Q 046900 359 KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN----MSEQTLEVALKRIHNFM 434 (442)
Q Consensus 359 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~----~~~e~i~~~l~~l~~~l 434 (442)
.+.+++|+|++++.... .+..++.+.|.++ ||.+.||..|. .+..++|++++. .+.+++++++++|.+++
T Consensus 283 ~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~-Gi~v~~g~~~~-~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 283 EVPVSNMFHLHFDGQAA----DISPKLEQVQEET-GLGFVGYLVDK-DGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp SSCSSSEEEEEEESCHH----HHHHHHHHHHHHH-CEESCSCCEEC-SSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred CCCcceEEEEEecCChH----HHHHHHHHHHHhc-CeEEecccccC-CCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 46677799999875311 1246777777666 99999997665 344589999862 37899999999998765
No 137
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.97 E-value=4.5e-29 Score=249.63 Aligned_cols=356 Identities=10% Similarity=0.056 Sum_probs=224.1
Q ss_pred CCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+|||+.+ .+.++ ++.+.+.+.+.... . .+....+..+++.++++++.+.++ .+
T Consensus 45 d~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~------------~-~~~~~~~~~~~~~~la~~l~~~~~----~~ 107 (452)
T 3n5m_A 45 DIQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQT------------L-SYFPMSQSHEPAIKLAEKLNEWLG----GE 107 (452)
T ss_dssp ETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTT------------C-CCCCTTSEEHHHHHHHHHHHHHHT----SC
T ss_pred ECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHh------------c-CCcccccCCHHHHHHHHHHHHhCC----CC
Confidence 3445678999877 34443 35555555443221 0 011122445667777777776654 23
Q ss_pred CCcEEEecChHHHHHHHHHhhc-----C---CCCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCCCCC
Q 046900 120 LNRIVVTAGATAANELLTFILA-----D---PGDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDSSNN 179 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~-----~---~gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~~~~ 179 (442)
.+ |++|+|+++++..+++++. . ++|.|++.+|+|.++...+....|. .+..++......
T Consensus 108 ~~-v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (452)
T 3n5m_A 108 YV-IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYR 186 (452)
T ss_dssp EE-EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTT
T ss_pred ce-EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCcccc
Confidence 44 9999999999999999887 5 7899999999998876544321121 233343211111
Q ss_pred CcC-C---------HHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCC
Q 046900 180 FQI-T---------PQALEAAYKEAESKDMRVRGVLITNP-SNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAF 247 (442)
Q Consensus 180 ~~~-d---------~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~ 247 (442)
+.. | +++|++.+++. ...++++|+++.+ +| ||.++ +.+.+++|.++|++||+++|+||+|.++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~ 263 (452)
T 3n5m_A 187 MPGIERENIYDVECVKEVDRVMTWE--LSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGR 263 (452)
T ss_dssp STTTTTSCGGGCHHHHHHHHHHHHH--CGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTT
T ss_pred CccCCchhhHHHHHHHHHHHHHHhc--CCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCc
Confidence 111 1 78999998731 1126666676666 79 99766 788899999999999999999999998766
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--------ccccCCCcHHHHHHH
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR--------MSSFTLISSQTQYLL 318 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~--------~~~~~~~s~~~q~~~ 318 (442)
.+..+ ... . .+...-+.+|||+++ .| +|+||+++ ++.+.+.+.. ....+..+++++.++
T Consensus 264 ~g~~~-~~~-~--------~~~~~di~t~sK~l~-~G~~~ig~~~~-~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa 331 (452)
T 3n5m_A 264 TGKAF-GFM-N--------YDVKPDIITMAKGIT-SAYLPLSATAV-KREIYEAFKGKGEYEFFRHINTFGGNPAACALA 331 (452)
T ss_dssp TSSSS-GGG-G--------TTCCCSEEEECGGGG-TTSSCCEEEEE-EHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHH
T ss_pred ccccc-hhh-h--------cCCCCCEEeeccccc-CCCcceEEEEE-CHHHHHHHhhccCCCCccccCCCCCCHHHHHHH
Confidence 55422 111 1 111112347999998 59 99999999 5667666532 123356788899888
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCceEEEEEecCCccccc---ChhhHHHHHHHHHHcCc
Q 046900 319 ASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECLKGNAGLFCWMNLSPLLEEQ---TREGELALWDSMLHEVK 394 (442)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~l~~~l~~~~g 394 (442)
.+.++..+. ++.+++.++.....++.+.+.+.++. +....+.| .|+++++....... ......+++..|+++ |
T Consensus 332 ~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-G 408 (452)
T 3n5m_A 332 LKNLEIIEN-ENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKG-LLVGIELVNDKETKEPIDNDKIASVVNACKEK-G 408 (452)
T ss_dssp HHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESS-SCEEEEEEEETTTTEECCHHHHHHHHHHHHHT-T
T ss_pred HHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEE-EEEEEEEecCCcccCCCCHHHHHHHHHHHHHC-C
Confidence 887763211 11223333333333344444334443 33444454 46677663211100 011235778888777 9
Q ss_pred EEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHH
Q 046900 395 LNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 395 i~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~ 435 (442)
|.+.|+..|....++++||+++ ..+++++++++++|+++++
T Consensus 409 v~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 409 LIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp EECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred cEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 9999998876555789999865 2389999999999999875
No 138
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.97 E-value=5.4e-29 Score=249.52 Aligned_cols=359 Identities=8% Similarity=0.018 Sum_probs=232.2
Q ss_pred CCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+|||+.+ .+.++ ++.+.+.+.+..... ...|....+..++++++++++.+..+ .+
T Consensus 47 d~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~-----------~~~~~~~~~~~~~~~~la~~l~~~~~----~~ 111 (460)
T 3gju_A 47 DNNGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNL-----------AYYHAYVGHGTEASITLAKMIIDRAP----KG 111 (460)
T ss_dssp ETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHH-----------SCCCCCTTCCCHHHHHHHHHHHHHSC----TT
T ss_pred ECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhc-----------cccccccccCCHHHHHHHHHHHhhCC----CC
Confidence 3445678999876 34443 345554444332110 11233334455777888888877643 46
Q ss_pred CCcEEEecChHHHHHHHHHhhcC--------CCCeEEEcCCCCcChHHhHhhhcC------------cEEEEEecCCC--
Q 046900 120 LNRIVVTAGATAANELLTFILAD--------PGDALLVPTPYYPGFDRDLRWRTG------------IKIVPIHCDSS-- 177 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~~G------------~~v~~v~~~~~-- 177 (442)
.++|++|+|+++++..+++++.. +++.|++.+|+|.++...+....| ..+..++....
T Consensus 112 ~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 191 (460)
T 3gju_A 112 MSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFR 191 (460)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGG
T ss_pred cCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCcccc
Confidence 78999999999999999998863 569999999999887654432111 12344442210
Q ss_pred -CCCcCC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCC
Q 046900 178 -NNFQIT--------PQALEAAYKEAESKDMRVRGVLITNPSNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAF 247 (442)
Q Consensus 178 -~~~~~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~ 247 (442)
+++..+ +++|++.+++.. ..++++|++..++|++|. +.+.+.+++|.++|++||+++|+||+|.++..
T Consensus 192 ~~~~g~~~~~~~~~~~~~le~~i~~~~--~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr 269 (460)
T 3gju_A 192 RTDRSMSEEQFSQHCADKLEEMILAEG--PETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGR 269 (460)
T ss_dssp CSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred CCccccChhHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 111233 578888886421 125555555544677776 77888899999999999999999999998765
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH---------ccccCCCcHHHHHH
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR---------MSSFTLISSQTQYL 317 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~---------~~~~~~~s~~~q~~ 317 (442)
.+..+ .. .... .... +.+|||+++ .| +|+||+++ ++.+.+.+.. ....+..++++|.+
T Consensus 270 ~g~~~-~~-~~~~-----~~pd---i~t~sK~l~-gG~~~lg~v~~-~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aa 337 (460)
T 3gju_A 270 LGTMF-GS-DHYG-----IKPD---LITIAKGLT-SAYAPLSGVIV-ADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAA 337 (460)
T ss_dssp TSSSC-HH-HHHT-----CCCS---EEEECGGGT-TTSSCCEEEEE-EHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHH
T ss_pred ccccc-hH-hhcC-----CCCC---eeeeehhhc-CCCCCeEEEEE-CHHHHHHHhcccccccccccCCCCCCCHHHHHH
Confidence 55322 22 2211 0122 347899997 67 89999999 5666666642 22346678899999
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCceEEEEEecCCcccc-c----ChhhHHHHHHHHHH
Q 046900 318 LASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECLKGNAGLFCWMNLSPLLEE-Q----TREGELALWDSMLH 391 (442)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~-~----~~~~~~~l~~~l~~ 391 (442)
+.+.|+.... ++++++.++..+..++.+.+.+.+++ +....+.| .|+++++...... . ......++++.|++
T Consensus 338 a~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 415 (460)
T 3gju_A 338 GVANLELIDE-MDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDG-MLAAVEFVADKDDRVFFDASQKIGPQVATALAA 415 (460)
T ss_dssp HHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEET-TEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeee-EEEEEEEccCccccccccchHHHHHHHHHHHHH
Confidence 8888873221 22345556666666677767776653 33444444 4777777542110 0 00125678888877
Q ss_pred cCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 392 EVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 392 ~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+ ||.+.|+. ..+++||++. ..+++++++++++|++++++..+
T Consensus 416 ~-Gv~v~~~~-----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 416 S-GVIGRAMP-----QGDILGFAPPLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp T-TEECEECS-----SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred C-CeEEecCC-----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 7 99999965 2478999965 33899999999999999987654
No 139
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.97 E-value=2.8e-29 Score=243.20 Aligned_cols=290 Identities=10% Similarity=0.083 Sum_probs=212.5
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC-hHHhHhhhcCcEEEEEec
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPG-FDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~~~G~~v~~v~~ 174 (442)
+..++.+.+.+++.+.++ . .++++|++|+|+++++.+++.++.++ +.+++..|.|.. +...+. ..|++++.++.
T Consensus 40 ~~~~~~~~~~~~la~~~g--~-~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~~~~~~~~~-~~g~~~~~v~~ 114 (362)
T 3ffr_A 40 KFEEVYKTASDNLKTLLE--L-PSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFSKRFYEFAG-ELGREAYKEEA 114 (362)
T ss_dssp HHHHHHHHHHHHHHHHTT--C-CTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHHHHHHHHHH-HTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhC--C-CCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHHHHHHHHHH-HhCCCeEEEec
Confidence 445666666666666654 1 14678999999999999999999888 656666666662 334555 48999999998
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc-CcEEEEeccCCcCCCCCCCcc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK-NIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~-~~~vi~De~y~~~~~~~~~~~ 253 (442)
+. ++.+|+++|+ +. .++++|++++|+||||.+++ +++|+++|++| |+++|+|++|+.+... .
T Consensus 115 ~~--~~~~d~~~l~--~~------~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~~~~~----~ 177 (362)
T 3ffr_A 115 AF--GKGFYPADIT--VP------ADAEIICLTHNETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSLPYPK----F 177 (362)
T ss_dssp CT--TCCCCGGGCC--CC------TTCCEEEEESEETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTTTSSC----C
T ss_pred CC--CCCCCHHHHh--cc------CCccEEEEEcCCCCcceeCC---HHHHHHHHHhCCCCEEEEecccccCCcc----c
Confidence 64 4678999988 32 38899999999999999999 77788899999 9999999999853321 1
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHHccc-----------------------cCC
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMSS-----------------------FTL 309 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~~-----------------------~~~ 309 (442)
.+ ....+++.|+||.++ .+| +|+++++ +.+.+.+..... .+.
T Consensus 178 ~~-----------~~~d~~~~s~~K~~~~~~G--~g~~~~~-~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 243 (362)
T 3ffr_A 178 DW-----------TKIDSVFFSVQKCFGLPAG--LGVWILN-DRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPET 243 (362)
T ss_dssp CT-----------TSCSEEEEETTSTTCCCSC--CEEEEEE-HHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSC
T ss_pred Ch-----------hHCcEEEEecccccCCCCc--eEEEEEC-HHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCC
Confidence 11 113377899999998 777 5778774 455544443221 445
Q ss_pred CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC----CceEEEEEecCCcccccChhhHHH
Q 046900 310 ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKG----NAGLFCWMNLSPLLEEQTREGELA 384 (442)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~ 384 (442)
.+...+.++...++... ...+++.+++++++++++.+.|++. |+++..+ .++.++|+.++. +..+
T Consensus 244 ~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 313 (362)
T 3ffr_A 244 PNAMNIFLLGKVTGDML--QISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM--------LPGE 313 (362)
T ss_dssp CCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS--------CHHH
T ss_pred chHHHHHHHHHHHHHHH--HccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC--------CHHH
Confidence 56666666666654211 1225677888899999999999998 8887652 345678888875 2678
Q ss_pred HHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 385 LWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 385 l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
+.+.|.++ ||.+.+|..+ ..++++||+++ ..+++++++++++|++++
T Consensus 314 ~~~~l~~~-gi~~~~g~~~--~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 314 INKILEPF-DMAVGAGYGS--KKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp HHHHHGGG-TEEEEECSGG--GTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHC-CeEEecCccc--cCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 88998888 9999998544 34689999997 337899999999998764
No 140
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.97 E-value=3.6e-29 Score=251.60 Aligned_cols=303 Identities=14% Similarity=0.135 Sum_probs=223.8
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh----cCCCC-----eEEEcCCCCcChHHhHhhh
Q 046900 94 YHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL----ADPGD-----ALLVPTPYYPGFDRDLRWR 164 (442)
Q Consensus 94 ~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l----~~~gd-----~Vl~~~p~y~~~~~~~~~~ 164 (442)
.+|..++++++++++.+.+| ++. .+++++|+++++..++.++ .++|| +|+++.|+|+.+...+..
T Consensus 102 ~~g~~~l~~~l~~~la~~~g----~~~-~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~- 175 (474)
T 1wyu_B 102 AQGALRLMWELGEYLKALTG----MDA-ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASM- 175 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHT----CSE-EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHH-
T ss_pred ChHHHHHHHHHHHHHHHHHC----CCc-eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHH-
Confidence 56888999999999998877 232 4778899999998755443 35887 999999999999988885
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|++++.+++++ ++.+|+++|++++.+ ++++|++++| ||||.+. +.+++|+++|+++|+++|+||+|+.
T Consensus 176 ~G~~vv~v~~~~--~~~~d~~~L~~~i~~------~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~ 244 (474)
T 1wyu_B 176 AGYQVREIPSGP--EGEVDLEALKRELGP------HVAALMLTNP-NTLGLFE--RRILEISRLCKEAGVQLYYDGANLN 244 (474)
T ss_dssp TTCEEEEECBCT--TSSBCHHHHHHHCST------TEEEEEECSS-CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGG
T ss_pred CCCEEEEecCCC--CCCcCHHHHHHhhCC------CceEEEEECC-CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhh
Confidence 899999999875 467999999998864 7899999998 6899883 3489999999999999999999987
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC-C---ceeEEEeecCHHHHHHHH-Hcc--------------
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP-G---FRVGTIYSYNDKVVTTAR-RMS-------------- 305 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~-G---~RiG~i~~~~~~~~~~~~-~~~-------------- 305 (442)
..++ ..+...+ +..+++.|+||.|+.| | +|+||+++++ .+.+.+. ...
T Consensus 245 ~~~g---~~~~~~~---------g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~-~l~~~l~~~~~~~~g~~~~~~~~~~ 311 (474)
T 1wyu_B 245 AIMG---WARPGDM---------GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKA-HLAPYLPVPLVERGEEGFYLDFDRP 311 (474)
T ss_dssp GTTT---TCCHHHH---------TCSEEECCTTTTTCCCCTTSCCCCCCEEECG-GGGGGCCSCEEEECSSCEEEECCCT
T ss_pred hhcc---CCCcccC---------CCcEEEEeCccccccCCCCCCCCeEEEEEcH-HHHHhCCCCeeeccCCeeEecccCc
Confidence 6542 1233222 3347788999999766 4 5999999954 4433332 100
Q ss_pred ------ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEE-EEEecCCcccccC
Q 046900 306 ------SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLF-CWMNLSPLLEEQT 378 (442)
Q Consensus 306 ------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~-~~~~~~~~~~~~~ 378 (442)
..+..+.+.+.++..++.... .+++++..+.+.++++++.+.|++.|+++..+...+. +|++++...
T Consensus 312 ~~~~~~~~~~~~~~~~~aa~~~l~~~g--~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~---- 385 (474)
T 1wyu_B 312 KSIGRVRSFYGNFLALVRAWAYIRTLG--LEGLKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQPPEGF---- 385 (474)
T ss_dssp TCCCCSSSTTSCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBCSTTC----
T ss_pred ccCcccccCcCcHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcEecCCCCcceEEEEEcCCCC----
Confidence 112245666777776665322 3457778888999999999999888877633332221 566663211
Q ss_pred hhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHH
Q 046900 379 REGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 379 ~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~ 436 (442)
+..++++.|+++ ||.+ |+..|+....+++||+++. .+++++++++++|++++++
T Consensus 386 --~~~~l~~~L~~~-Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 386 --RALDLAKGLLEL-GFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp --CHHHHHHHHHHT-TCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred --CHHHHHHHHHHC-Cccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 367888999877 9985 6666643335789999973 3789999999999988753
No 141
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.97 E-value=6.4e-30 Score=254.79 Aligned_cols=353 Identities=14% Similarity=0.078 Sum_probs=219.6
Q ss_pred CCCCceeeeecccc--cc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 45 TNPSGVIQMGLAEN--QV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 45 ~~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
.....+|||+.+.+ ++ +++.+.+.+.+.... ...|....|..++++++++++.+.++ ...
T Consensus 40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~------------~~~~~~~~~~~~~~~~l~~~la~~~~----~~~ 103 (439)
T 3dxv_A 40 ENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAAN------------PAGATILSASNAPAVTLAERLLASFP----GEG 103 (439)
T ss_dssp TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHS------------CSCSCSSSSEEHHHHHHHHHHHHTTT----CTT
T ss_pred CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHh------------ccCccccccCCHHHHHHHHHHHHhCC----CCC
Confidence 34567899988765 33 235555544433211 12344345667888888888887653 234
Q ss_pred -CcEEEecChHHHHHHHHHhh--cCCCCeEEEcCCCCcChHHhHhhhcCcEE--------------EEEecCCCCCCcC-
Q 046900 121 -NRIVVTAGATAANELLTFIL--ADPGDALLVPTPYYPGFDRDLRWRTGIKI--------------VPIHCDSSNNFQI- 182 (442)
Q Consensus 121 -~~i~~t~G~~~ai~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v--------------~~v~~~~~~~~~~- 182 (442)
++|++|+|+++++..+++++ ..+++.|++.+|+|.++...+....|... ..+|.+. .+..
T Consensus 104 ~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 181 (439)
T 3dxv_A 104 THKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRP--YRNDP 181 (439)
T ss_dssp TEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSC--BTTBT
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCc--ccccc
Confidence 79999999999999999885 33667888889998766544332233221 2222221 1111
Q ss_pred ----CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC-HHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHH
Q 046900 183 ----TPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ-RSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAE 257 (442)
Q Consensus 183 ----d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~-~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~ 257 (442)
|+++|++++++. ...++++|++++++|++|.+.+ .+.+++|.++|++|++++|+||+|.++...+..+ .. +
T Consensus 182 ~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~-~~-~ 257 (439)
T 3dxv_A 182 TGDAILTLLTEKLAAV--PAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLH-CF-E 257 (439)
T ss_dssp TSHHHHHHHHHHHHTS--CTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSS-GG-G
T ss_pred cHHHHHHHHHHHHHhc--CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HH-H
Confidence 689999988411 1236677777767788888665 4459999999999999999999999865544321 11 1
Q ss_pred HHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc--cccCCCcHHHHHHHHHHhcCchhHHHHHHHH
Q 046900 258 ILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--SSFTLISSQTQYLLASMLSNKKFTENYIKTN 335 (442)
Q Consensus 258 ~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 335 (442)
... ....+ .||||+++ +|+|+||+++ ++.+.+.+... ...+ .+++++.++.++++.... +++.++.
T Consensus 258 ~~~-----~~~di---~s~sK~~~-~G~riG~~~~-~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~-~~~~~~~ 325 (439)
T 3dxv_A 258 HEG-----FVPDI---LVLGKGLG-GGLPLSAVIA-PAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR-DDLPAMA 325 (439)
T ss_dssp GTT-----CCCSE---EEECGGGG-TTSCCEEEEE-EHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH-TTHHHHH
T ss_pred hcC-----CCCCE---EEEcchhc-CCcceEEEEE-CHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh-cCHHHHH
Confidence 110 11222 39999999 7999999999 56666555432 2335 788888888877763221 1122222
Q ss_pred HHHHHHHHHHHHHHHHhCC-CeeecCCceEEEEEecCCccc--ccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEE
Q 046900 336 RERLQKRYQMIIEGLRSAG-IECLKGNAGLFCWMNLSPLLE--EQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFR 412 (442)
Q Consensus 336 ~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iR 412 (442)
++..+..++.+.+.+...+ +....+. |.|+|+++..... ........++++.|+++ ||.+.||..+ .+++|
T Consensus 326 ~~~~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~----~~~iR 399 (439)
T 3dxv_A 326 ERKGRLLRDGLSELAKRHPLIGDIRGR-GLACGMELVCDRQSREPARAETAKLIYRAYQL-GLVVYYVGMN----GNVLE 399 (439)
T ss_dssp HHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEEEETTTTEECHHHHHHHHHHHHHH-TEECEEESTT----SCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCCHHHHHHHHHHHHHC-CcEEeecCCC----CCEEE
Confidence 3322333333333333343 3333444 5577777621100 01122467788888888 9999998532 47899
Q ss_pred EEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 413 VCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 413 ls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
|+++ ..+++++++++++|++++++.
T Consensus 400 i~~~~~~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 400 FTPPLTITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHTG
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9865 338999999999999998865
No 142
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.97 E-value=8.6e-29 Score=248.56 Aligned_cols=322 Identities=15% Similarity=0.219 Sum_probs=219.5
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC----CCCe---EEEcCCCCcChHHhHh
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD----PGDA---LLVPTPYYPGFDRDLR 162 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~----~gd~---Vl~~~p~y~~~~~~~~ 162 (442)
.|.+..+..+||++++++++ .++|++|+|+++++.+++.++++ +||. |+++.+.|..+...+.
T Consensus 71 ~y~~~~~~~~l~~~la~~~~----------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~ 140 (467)
T 1ax4_A 71 AYAGSRNYYDLKDKAKELFN----------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVE 140 (467)
T ss_dssp CSSSCHHHHHHHHHHHHHHC----------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHcC----------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHh
Confidence 57666788999999999974 36899999999999999999988 9998 9998777777777777
Q ss_pred hhcCcEEEEEecCC----C----CCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC-CcCCCHHHHHHHHHHHHhcC
Q 046900 163 WRTGIKIVPIHCDS----S----NNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPL-GATIQRSVLEELLDFATRKN 233 (442)
Q Consensus 163 ~~~G~~v~~v~~~~----~----~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPt-G~~~~~~~l~~l~~~~~~~~ 233 (442)
. .|++++.++.+. . .++.+|++.|++++++.. ..++++|++++|+||| |.+++.+++++|+++|++||
T Consensus 141 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~g 217 (467)
T 1ax4_A 141 L-NGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHG 217 (467)
T ss_dssp H-TTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHT
T ss_pred c-cCCceecccccccccccccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcC
Confidence 4 899988776532 1 134689999999998531 1268999999999999 89999999999999999999
Q ss_pred cEEEEeccCCc--C--------CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC-CceeEEEeecCH-HHHHHH
Q 046900 234 IHLVSDEIYSG--S--------AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP-GFRVGTIYSYND-KVVTTA 301 (442)
Q Consensus 234 ~~vi~De~y~~--~--------~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~-G~RiG~i~~~~~-~~~~~~ 301 (442)
++||+||++.. . .+.+ .++.++.++.. ...+ +++.|+||.+|++ | ||++++++ .+.+.+
T Consensus 218 i~li~De~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~d--~~~~s~sK~~g~~~G---g~~~~~d~~~l~~~~ 288 (467)
T 1ax4_A 218 IFVVMDSARFCENAYFIKARDPKYKN---ATIKEVIFDMY-KYAD--ALTMSAKKDPLLNIG---GLVAIRDNEEIFTLA 288 (467)
T ss_dssp CCEEEECTTHHHHHHHHHHHCGGGTT---CCHHHHHHHHG-GGCS--EEEEETTSTTCCSSC---EEEEESSCHHHHHHH
T ss_pred CEEEEEchhhhhcchhccccccccCC---Cchhhhhhhhc-cccc--eEEEeccccCCCCcc---eEEEeCCHHHHHHHH
Confidence 99999998542 0 1222 23334331100 0012 4568999999866 4 77777534 555544
Q ss_pred HHcc-------ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcc
Q 046900 302 RRMS-------SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLL 374 (442)
Q Consensus 302 ~~~~-------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~ 374 (442)
.... .+...+...+.++...+..... .+.+ +...++++++.+.|.+.|+++..+.+++++|+++....
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~----~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 363 (467)
T 1ax4_A 289 RQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE-EEYL----HYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLV 363 (467)
T ss_dssp HHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC-HHHH----HHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEESTTTC
T ss_pred HhhccccccccccCCccchHHHHHHHHHHHhhh-hhHH----HHHHHHHHHHHHHHHhCCCCcccCCCceEEEEehhhhc
Confidence 3321 1122333333323323321100 1122 22235667888888777888878888999999843210
Q ss_pred cc--cChhhHHHHHHHHHHcCcEEEeC-CCCC-CC---------CCCCEEEEEeec--CCHHHHHHHHHHHHHHHHHHH
Q 046900 375 EE--QTREGELALWDSMLHEVKLNISP-GSSC-HC---------SEPGWFRVCFAN--MSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 375 ~~--~~~~~~~~l~~~l~~~~gi~v~p-g~~f-~~---------~~~~~iRls~~~--~~~e~i~~~l~~l~~~l~~~~ 438 (442)
.. ....+..+++..|++++||.+.| |+.| +. ...+++||+++. .+++++++++++|++++++..
T Consensus 364 ~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 364 PQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp TTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred cccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhhh
Confidence 00 00013567888884555999999 6532 11 013789999982 489999999999999987743
No 143
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.97 E-value=5.3e-29 Score=253.07 Aligned_cols=310 Identities=15% Similarity=0.140 Sum_probs=229.7
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcE--EEecChHHHHHHHHHhhcCCC--------CeEEEcCCCCcChHH
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRI--VVTAGATAANELLTFILADPG--------DALLVPTPYYPGFDR 159 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i--~~t~G~~~ai~~~~~~l~~~g--------d~Vl~~~p~y~~~~~ 159 (442)
.|..+.+...+++++++++.+.+| .+.+++++ ++|+|+++++..++.++.++| |.|+++.|+|..+..
T Consensus 130 ~~~~~p~~~~le~~l~~~la~~~g--~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~ 207 (514)
T 3mad_A 130 HPDLWPSTAKFEAEVVAMTAHMLG--GDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDK 207 (514)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTT--GGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHH
T ss_pred ccccChHHHHHHHHHHHHHHHHcC--CCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHH
Confidence 344455778999999999998876 33334788 999999999999999998776 999999999999999
Q ss_pred hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEe
Q 046900 160 DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSD 239 (442)
Q Consensus 160 ~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~D 239 (442)
.++. .|++++.+|+++ ++.+|+++|++++++ ++++|++++|+||||.+.+ +++|.++|++||+++|+|
T Consensus 208 ~~~~-~G~~v~~v~~~~--~~~~d~~~Le~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livD 275 (514)
T 3mad_A 208 AAQY-FGIKLVRTPLDA--DYRADVAAMREAITP------NTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVD 275 (514)
T ss_dssp HHHH-HTCEEEEECBCT--TSCBCHHHHHHHCCT------TEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEE
T ss_pred HHHH-cCCeeEEeeeCC--CCCCCHHHHHHHhcc------CCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEe
Confidence 9985 899999999876 577999999999865 7899999999999999988 788889999999999999
Q ss_pred ccCCcCCCC-----CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc--------
Q 046900 240 EIYSGSAFS-----SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS-------- 306 (442)
Q Consensus 240 e~y~~~~~~-----~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~-------- 306 (442)
|+|+.+.+. +.....+. . ...+..+++.|++|.++ +|.++||++++++.+.........
T Consensus 276 ea~~~~~~~~~~~~g~~~~~~~-~------~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (514)
T 3mad_A 276 ACLGGFILPWAERLGYPVPPFD-F------RLEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADWPGGLYF 347 (514)
T ss_dssp CTTTTTTHHHHHHTTCCCCCCS-T------TSTTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSCTTCSEE
T ss_pred cccccccchhHHhcCCCCCccc-c------cCCCCcEEEECchhccC-CCCCeEEEEEeCHHHhccccccccccCCCccc
Confidence 999976541 11000100 0 11245677899999874 788999999977655432111110
Q ss_pred ----cCCCc---HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCCcccccC
Q 046900 307 ----FTLIS---SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSPLLEEQT 378 (442)
Q Consensus 307 ----~~~~s---~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~ 378 (442)
.+..+ ...+.++...+. ...+++..+++.++++++.+.|++. |+++..+..+ ++|+..+..
T Consensus 348 ~~~~~gs~~~~~~~a~~aal~~l~-----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~~~----- 416 (514)
T 3mad_A 348 SPTFAGSRPGALSATAWAAMLSLG-----EEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASDEL----- 416 (514)
T ss_dssp ESSSCSSCCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECSSS-----
T ss_pred CCccCCCCchHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCCCC-----
Confidence 01111 223333333332 2345677788888999999999987 8888776665 677765432
Q ss_pred hhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec--CCHHHHHHHHHHHHHHHHHHHhh
Q 046900 379 REGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN--MSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 379 ~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~--~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
+..++.+.|.++ ||.+ +|..| ++++|+++.. .+++++++++++|++++++..+.
T Consensus 417 --~~~~l~~~L~~~-Gi~v-~g~~~----~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~ 472 (514)
T 3mad_A 417 --NIYQVMEEMAGR-GWRL-NGLHR----PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAH 472 (514)
T ss_dssp --CHHHHHHHHHTT-TCBC-EEETT----TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHC
T ss_pred --CHHHHHHHHHhc-CCEe-ccCCC----CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 256788888777 9988 55443 4679999872 25689999999999999877643
No 144
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.97 E-value=9.7e-29 Score=242.46 Aligned_cols=292 Identities=13% Similarity=0.175 Sum_probs=212.9
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEE
Q 046900 93 DYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVP 171 (442)
Q Consensus 93 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~ 171 (442)
+..+..++|+++|++++ .+++++|+|+++++.+++.++ +++||.|+++.|+|+.+...++. .|++++.
T Consensus 37 ~~~~~~~l~~~la~~~~----------~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~~ 105 (393)
T 1mdo_A 37 TGPKNQELEAAFCRLTG----------NQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVL-LGANPVM 105 (393)
T ss_dssp SSHHHHHHHHHHHHHHC----------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHH-TTCEEEE
T ss_pred CChHHHHHHHHHHHHhC----------CCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHHHHH-CCCEEEE
Confidence 44688999999999985 248999999999999999999 89999999999999999988884 8999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC-CCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS-AFSSS 250 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~-~~~~~ 250 (442)
++++++ ++.+|++.|++.+++ ++++|+++ ||||.+.+ +++|.++|+++|+++|+||+|+.. .+.+.
T Consensus 106 v~~~~~-~~~~d~~~l~~~l~~------~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~ 172 (393)
T 1mdo_A 106 VDVDRD-TLMVTPEHIEAAITP------QTKAIIPV---HYAGAPAD---LDAIYALGERYGIPVIEDAAHATGTSYKGR 172 (393)
T ss_dssp ECBCTT-TCCBCHHHHHHHCCT------TEEEECCB---CGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEETTE
T ss_pred EeccCC-cCCCCHHHHHHhcCC------CceEEEEe---CCCCCcCC---HHHHHHHHHHcCCeEEEECccccCCeECCe
Confidence 998753 578999999998864 67887765 48999877 788889999999999999999963 33321
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCc--ccCCCCCceeEEEeecCHHHHHHHHHccccC--------------------
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLS--KDLGLPGFRVGTIYSYNDKVVTTARRMSSFT-------------------- 308 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~S--K~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~-------------------- 308 (442)
... . ..+++.|+| |.+ +|.|+||++++++.+.+.++.....+
T Consensus 173 ~~~-------------~-~d~~~~S~~k~K~l--~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (393)
T 1mdo_A 173 HIG-------------A-RGTAIFSFHAIKNI--TCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVL 236 (393)
T ss_dssp ETT-------------S-SSEEEEECCTTSSS--CSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEES
T ss_pred ecC-------------C-CCeEEEeCCCCCcc--ccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhccccccccccc
Confidence 110 0 458889999 655 55699999996567766655432211
Q ss_pred ------CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-C-----CceEEEEEecCC---c
Q 046900 309 ------LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK-G-----NAGLFCWMNLSP---L 373 (442)
Q Consensus 309 ------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~-----~~g~~~~~~~~~---~ 373 (442)
.++.+...++...+. .+++..++.++.++++.+.|.+.++++.. + .+++++|+.++. .
T Consensus 237 ~~g~~~~~~~~~~a~~~~~l~-------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 309 (393)
T 1mdo_A 237 APGYKYNLPDLNAAIALAQLQ-------KLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCG 309 (393)
T ss_dssp SCCCBCCCCHHHHHHHHHHHH-------THHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHS
T ss_pred ccCccCCCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEecccccc
Confidence 123333333333332 13344455556778888899887766542 2 355678998873 1
Q ss_pred ccccChhhHHHHHHHHHHcCcEEEeCCCCCC--------------CC-----CCCEEEEEee-cCCHHHHHHHHHHHHHH
Q 046900 374 LEEQTREGELALWDSMLHEVKLNISPGSSCH--------------CS-----EPGWFRVCFA-NMSEQTLEVALKRIHNF 433 (442)
Q Consensus 374 ~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~--------------~~-----~~~~iRls~~-~~~~e~i~~~l~~l~~~ 433 (442)
. +..++.+.|.++ ||.+.+|..+. .. ...++||++. ..+++++++++++|+++
T Consensus 310 ~------~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 382 (393)
T 1mdo_A 310 I------TRDALMASLKTK-GIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQI 382 (393)
T ss_dssp S------CHHHHHHHHHHT-TBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred c------CHHHHHHHHHhC-CCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 1 256788888776 99999986441 00 1347999997 34899999999999998
Q ss_pred HHHHH
Q 046900 434 MQKRE 438 (442)
Q Consensus 434 l~~~~ 438 (442)
++.++
T Consensus 383 ~~~~~ 387 (393)
T 1mdo_A 383 AGQGS 387 (393)
T ss_dssp HC---
T ss_pred HhcCC
Confidence 87654
No 145
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.97 E-value=1.9e-29 Score=247.23 Aligned_cols=298 Identities=16% Similarity=0.227 Sum_probs=216.4
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcE
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIK 168 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~ 168 (442)
.|.+..+..++|++++++++ . .+.|++++| ++++.+++.++ +++||+|+++.|+|+.+...+.. .|++
T Consensus 33 ~~~~~~~~~~l~~~la~~~~--------~-~~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~-~g~~ 101 (388)
T 1b9h_A 33 WRMGGDEVNSFEREFAAHHG--------A-AHALAVTNG-THALELALQVMGVGPGTEVIVPAFTFISSSQAAQR-LGAV 101 (388)
T ss_dssp BTTTCSHHHHHHHHHHHHTT--------C-SEEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHH-TTCE
T ss_pred eecCCHHHHHHHHHHHHHhC--------C-CeEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCccHHHHHHHHH-cCCE
Confidence 35555688999999999985 2 256777777 89999999999 89999999999999999998884 8999
Q ss_pred EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC-CC
Q 046900 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS-AF 247 (442)
Q Consensus 169 v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~-~~ 247 (442)
++.++++++ +|.+|++.|++.+++ ++++|+ |+||||.+.+ +++|+++|+++|++||+|++|+.. .+
T Consensus 102 ~~~v~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~n~tG~~~~---l~~i~~la~~~~~~li~D~a~~~g~~~ 168 (388)
T 1b9h_A 102 TVPVDVDAA-TYNLDPEAVAAAVTP------RTKVIM---PVHMAGLMAD---MDALAKISADTGVPLLQDAAHAHGARW 168 (388)
T ss_dssp EEEECBCTT-TCCBCHHHHHHHCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEE
T ss_pred EEEEecCCC-cCCCCHHHHHHhcCc------CceEEE---EeCCccCcCC---HHHHHHHHHHcCCEEEEecchhcCCcc
Confidence 999999753 478999999998854 677665 9999999987 788888899999999999999863 23
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHH--HHHHHHcccc--------------CC--
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKV--VTTARRMSSF--------------TL-- 309 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~--~~~~~~~~~~--------------~~-- 309 (442)
.+. ++ .. .+ ++++.||||..+++|.|+||++++++.+ .+.+...... +.
T Consensus 169 ~~~---~~----~~-----~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 235 (388)
T 1b9h_A 169 QGK---RV----GE-----LD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNM 235 (388)
T ss_dssp TTE---EG----GG-----SS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBC
T ss_pred CCe---ec----cc-----cc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccC
Confidence 221 11 11 12 4778999977666778999999966545 4444322211 11
Q ss_pred -CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec------CCceEEEEEecCCcccccChhh
Q 046900 310 -ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK------GNAGLFCWMNLSPLLEEQTREG 381 (442)
Q Consensus 310 -~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~------~~~g~~~~~~~~~~~~~~~~~~ 381 (442)
.+.+...++...+ +++++..+.++++++++.+.|++. |+++.. +.+++++|+.++... ..+
T Consensus 236 ~~~~~~~a~~~~~~-------~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 304 (388)
T 1b9h_A 236 RLNEFSASVLRAQL-------ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT----EER 304 (388)
T ss_dssp BCBHHHHHHHHHHH-------TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC----HHH
T ss_pred CcCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC----ccc
Confidence 2333222222222 234556777888899999999887 787765 355789999987531 013
Q ss_pred HHHHHHHHHHcCcEEEeCCCCCC----------CCC-----------------CCEEEEEee-cC-CHHHHHHHHHHHHH
Q 046900 382 ELALWDSMLHEVKLNISPGSSCH----------CSE-----------------PGWFRVCFA-NM-SEQTLEVALKRIHN 432 (442)
Q Consensus 382 ~~~l~~~l~~~~gi~v~pg~~f~----------~~~-----------------~~~iRls~~-~~-~~e~i~~~l~~l~~ 432 (442)
..++.+.|.++ ||.+.++.... ... .+.+||++. .+ ++++++++++.|++
T Consensus 305 ~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~ 383 (388)
T 1b9h_A 305 RNALVDRLVEA-GLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIAD 383 (388)
T ss_dssp HHHHHHHHHHT-TCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHH
Confidence 56788888776 99998864310 000 135999986 56 78999999999999
Q ss_pred HHHH
Q 046900 433 FMQK 436 (442)
Q Consensus 433 ~l~~ 436 (442)
++++
T Consensus 384 ~~~~ 387 (388)
T 1b9h_A 384 AVAR 387 (388)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8754
No 146
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.97 E-value=3.1e-28 Score=239.51 Aligned_cols=283 Identities=17% Similarity=0.162 Sum_probs=195.9
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH----hhhcCcEEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL----RWRTGIKIV 170 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~~G~~v~ 170 (442)
....++++.++++++ .+ ++++++++++++..++.+++++||+|+++.|+|+.+...+ . ..|++++
T Consensus 64 ~~~~~l~~~la~~~g--------~~--~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-~~g~~~~ 132 (398)
T 2rfv_A 64 PTTDALEKKLAVLER--------GE--AGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMP-KFGINVR 132 (398)
T ss_dssp HHHHHHHHHHHHHHT--------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHH-HTTCEEE
T ss_pred hHHHHHHHHHHHHhC--------CC--cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHH-HcCCEEE
Confidence 456677777777764 22 5556666679999999999999999999999999887765 5 4899999
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
.++.+ |++.+++.+++ ++++|++++|+||||.+++ +++|+++|++||+++|+||+|+.+.+..
T Consensus 133 ~v~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~- 195 (398)
T 2rfv_A 133 FVDAA-------KPEEIRAAMRP------ETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ- 195 (398)
T ss_dssp EECTT-------SHHHHHHHCCT------TEEEEEEESSBTTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-
T ss_pred EeCCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 99863 78999988764 7899999999999999998 8889999999999999999999765531
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHccc---cCCCcHHHHHHHHHHhcCch
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRMSS---FTLISSQTQYLLASMLSNKK 326 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~ 326 (442)
+. . .+..+++.|+||.++.+|+|+ ||++++++.+.+.++.... .+..+++.|.++.+.++..
T Consensus 196 ---~~-~---------~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 261 (398)
T 2rfv_A 196 ---PL-Q---------LGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTL- 261 (398)
T ss_dssp ---GG-G---------GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTH-
T ss_pred ---ch-h---------hCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhH-
Confidence 11 1 145688999999998899998 9999954443324443222 2356788888888888642
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC---------------CCeeecC----CceEEEEEecCCcccccChhhHHHHHH
Q 046900 327 FTENYIKTNRERLQKRYQMIIEGLRSA---------------GIECLKG----NAGLFCWMNLSPLLEEQTREGELALWD 387 (442)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~---------------g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~l~~ 387 (442)
..++ +.+.++.+.+.+.|++. ++++..+ .++ +++++++... .+...+.+
T Consensus 262 --~~~~----~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~-~~~~~~~~~~-----~~~~~l~~ 329 (398)
T 2rfv_A 262 --GIRM----ERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGG-IISFEIAGGL-----EAGRRMIN 329 (398)
T ss_dssp --HHHH----HHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCS-EEEEEETTHH-----HHHHHHHT
T ss_pred --HHHH----HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCce-EEEEEEcCCH-----HHHHHHHH
Confidence 2222 33444555666666553 2222222 355 5566876420 12333433
Q ss_pred HHHHcCcEEEeCCCCCC---------------------CCCCCEEEEEeecC-CHHHHHHHHHHHHH
Q 046900 388 SMLHEVKLNISPGSSCH---------------------CSEPGWFRVCFANM-SEQTLEVALKRIHN 432 (442)
Q Consensus 388 ~l~~~~gi~v~pg~~f~---------------------~~~~~~iRls~~~~-~~e~i~~~l~~l~~ 432 (442)
.+.. .|+.+.+|+.|. +..++++|||++.. ++++++++++.|++
T Consensus 330 ~~~~-~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 330 SVEL-CLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp TCSS-SEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred hCCc-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 3322 288888887652 01257999999842 45556655555543
No 147
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.97 E-value=7.2e-29 Score=246.45 Aligned_cols=339 Identities=12% Similarity=0.065 Sum_probs=218.7
Q ss_pred CCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCc
Q 046900 47 PSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNR 122 (442)
Q Consensus 47 ~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~ 122 (442)
...+||++.+. +++ +++.+.+.+.+....... .....|+. ....++++++++++ + +++++
T Consensus 42 g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~-------~~~~~~~~-~~~~~l~~~la~~~----~----~~~~~ 105 (429)
T 1s0a_A 42 GRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSH-------VMFGGITH-APAIELCRKLVAMT----P----QPLEC 105 (429)
T ss_dssp SCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSC-------CCCSSEEC-HHHHHHHHHHHHHS----C----TTCCE
T ss_pred CCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccc-------ccccccCC-HHHHHHHHHHHHhC----C----CCCCE
Confidence 45678887775 344 234455444433211000 00113432 12345555555553 2 46899
Q ss_pred EEEecChHHHHHHHHHhhc---C----CCCeEEEcCCCCcChHHhHhhhc---------------CcEEEEEecCC-CCC
Q 046900 123 IVVTAGATAANELLTFILA---D----PGDALLVPTPYYPGFDRDLRWRT---------------GIKIVPIHCDS-SNN 179 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~---~----~gd~Vl~~~p~y~~~~~~~~~~~---------------G~~v~~v~~~~-~~~ 179 (442)
|++|+|+++++..+++++. + +||.|++.+|+|+++...+.... ++..++++... ++.
T Consensus 106 v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (429)
T 1s0a_A 106 VFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGE 185 (429)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CC
T ss_pred EEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCccccccc
Confidence 9999999999999988653 2 68999999999987654322111 34444443211 123
Q ss_pred C-cCCHHHHHHHHHHHHhcCCceeEEEEeCC--CCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccH
Q 046900 180 F-QITPQALEAAYKEAESKDMRVRGVLITNP--SNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSI 255 (442)
Q Consensus 180 ~-~~d~~~l~~~l~~~~~~~~~~~~v~l~~P--~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~ 255 (442)
| .+|++.|++.+++. ..+++ +++++| +||||. +.+.+.+++|+++|++||+++|+||+|.++.+.+..+ .+
T Consensus 186 ~~~~d~~~l~~~l~~~---~~~~~-~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~-~~ 260 (429)
T 1s0a_A 186 WDERDMVGFARLMAAH---RHEIA-AVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-AC 260 (429)
T ss_dssp CCGGGGHHHHHHHHHH---TTTEE-EEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GG
T ss_pred chHHHHHHHHHHHHhC---CCCEE-EEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHH-Hh
Confidence 4 47899999998752 12454 556677 589996 5578889999999999999999999999865544321 11
Q ss_pred HHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHc-------cccCCCcHHHHHHHHHHhcCchh
Q 046900 256 AEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRM-------SSFTLISSQTQYLLASMLSNKKF 327 (442)
Q Consensus 256 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~-------~~~~~~s~~~q~~~~~~l~~~~~ 327 (442)
... . ...++ .||||.++ +| +|+||+++ ++.+.+.+... ...+..++++|.++.++++...
T Consensus 261 ~~~-~-----~~~d~---~t~sK~l~-~G~~~iG~~~~-~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~- 328 (429)
T 1s0a_A 261 EHA-E-----IAPDI---LCLGKALT-GGTMTLSATLT-TREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILE- 328 (429)
T ss_dssp GGG-T-----CCCSE---EEECGGGG-TSSSCCEEEEE-CHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHH-
T ss_pred hhc-C-----CCCCE---EEeccccc-CCCccceEEEe-CHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHH-
Confidence 111 1 01222 37999998 79 99999999 45666666542 2235567888888877775211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCC
Q 046900 328 TENYIKTNRERLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSC 403 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f 403 (442)
+ ....+.++++++++.+.|++. ++....+.+ .|+|++++... +..++++.|+++ ||.+.|+
T Consensus 329 --~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g-~~~~~~~~~~~------~~~~l~~~l~~~-Gi~v~~~--- 393 (429)
T 1s0a_A 329 --S--GDWQQQVADIEVQLREQLAPARDAEMVADVRVLG-AIGVVETTHPV------NMAALQKFFVEQ-GVWIRPF--- 393 (429)
T ss_dssp --T--CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEET-TEEEEEESSCB------CHHHHHHHHHHT-TEECCCB---
T ss_pred --h--CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEee-EEEEEEECCcc------cHHHHHHHHHHC-CCEEecc---
Confidence 1 123455666777888888764 343344444 58899887532 256788888766 9999883
Q ss_pred CCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 404 HCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 404 ~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.+++||+++ ..+++++++++++|++++++.
T Consensus 394 ----~~~iRis~~~~~t~e~i~~~~~~l~~~~~~~ 424 (429)
T 1s0a_A 394 ----GKLIYLMPPYIILPQQLQRLTAAVNRAVQDE 424 (429)
T ss_dssp ----TTEEEECCCTTCCHHHHHHHHHHHHHHTSSG
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 268999965 338999999999999987653
No 148
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.97 E-value=1.4e-29 Score=245.33 Aligned_cols=288 Identities=12% Similarity=0.116 Sum_probs=201.9
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecCh-HHHHHHHHHhhcCC---CCeEEEcCCCCcChHHhHhhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGA-TAANELLTFILADP---GDALLVPTPYYPGFDRDLRWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~-~~ai~~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~~G~~v~~ 171 (442)
+..++.+++.+++.+.+| .. ++++|++|+|+ ++++.+++.+++.+ ||.|+++.++|..+ ..++ ..| +++.
T Consensus 45 ~~~~~~~~l~~~la~~~g--~~-~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~-~~g-~~~~ 118 (360)
T 1w23_A 45 SYEEVHEQAQNLLRELLQ--IP-NDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-KEAK-LLG-ETHI 118 (360)
T ss_dssp HHHHHHHHHHHHHHHHHT--CC-TTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-HHHH-TTS-EEEE
T ss_pred HHHHHHHHHHHHHHHHhC--CC-CCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-HHHH-HhC-CeEE
Confidence 444455555555555544 21 35799999999 99999999988765 56777777777543 3345 379 9999
Q ss_pred EecCCCCCCcCCHHHHHH-HHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEA-AYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~-~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
+++++++++ +|++++++ .+++ ++|+|++++|+||||.+++ ++ +++||++||+||+|+.+..
T Consensus 119 v~~~~~~~~-~d~~~l~~~~i~~------~~k~v~~~~~~nptG~~~~--~i------~~~~~~~li~D~a~~~~~~--- 180 (360)
T 1w23_A 119 AASTKANSY-QSIPDFSEFQLNE------NDAYLHITSNNTIYGTQYQ--NF------PEINHAPLIADMSSDILSR--- 180 (360)
T ss_dssp EEECGGGTS-CSCCCGGGCCCCT------TEEEEEEESEETTTTEECS--SC------CCCCSSCEEEECTTTTTSS---
T ss_pred eecccccCc-CCccchHhhccCC------CCCEEEEeCCCCCcceecc--cc------cccCCceEEEechhhcCCC---
Confidence 998753333 68888887 6643 7899999999999999987 22 3379999999999986432
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc--------------ccCCCcHHHHH
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS--------------SFTLISSQTQY 316 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--------------~~~~~s~~~q~ 316 (442)
..++ .+ . .++++|+||.+|++| +||++++ +.+.+.++... ..+..+...+.
T Consensus 181 -~~~~----~~-----~--di~~~s~sK~~~~~G--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (360)
T 1w23_A 181 -PLKV----NQ-----F--GMIYAGAQKNLGPSG--VTVVIVK-KDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIY 245 (360)
T ss_dssp -CCCG----GG-----C--SEEEEETTTTTSCTT--CEEEEEE-HHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHH
T ss_pred -CcCc----cc-----C--CEEEEEcccccCCCC--cEEEEEc-HHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHH
Confidence 1121 11 1 268899999999666 8999995 44443332211 11234555555
Q ss_pred HHHHHhcCchhHHH--HHHHHHHHHHHHHHHHHHHHHhCC-C-eee-cC--CceEEEEEecCCcccccChhhHHHHHHHH
Q 046900 317 LLASMLSNKKFTEN--YIKTNRERLQKRYQMIIEGLRSAG-I-ECL-KG--NAGLFCWMNLSPLLEEQTREGELALWDSM 389 (442)
Q Consensus 317 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~-~~--~~g~~~~~~~~~~~~~~~~~~~~~l~~~l 389 (442)
++...++. ..+ ++++.+++++++++++.+.|++.+ + ... .+ .+++++|++++.. .+..++.+.|
T Consensus 246 ~~~~al~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l 316 (360)
T 1w23_A 246 MLRNVLDW---IKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE------ELNQQFLAKA 316 (360)
T ss_dssp HHHHHHHH---HHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH------HHHHHHHHHH
T ss_pred HHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC------ccHHHHHHHH
Confidence 55555542 222 467788899999999999998875 4 543 13 3566899998752 1356777777
Q ss_pred HHcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHH
Q 046900 390 LHEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 390 ~~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~ 436 (442)
.++ ||.+.||..| ++++||+++. .+++++++++++|++++++
T Consensus 317 ~~~-gi~~~~~~~~----~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 317 KEQ-GFVGLNGHRS----VGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp HHT-TEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHC-CeeeecCCCC----CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 655 9999998754 4789999983 2789999999999988754
No 149
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.96 E-value=1.2e-28 Score=247.04 Aligned_cols=355 Identities=12% Similarity=0.083 Sum_probs=226.6
Q ss_pred CCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 45 TNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 45 ~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
.....+|||+.+ .+.++ ++.+.+.+.+..... ...|+...+..++++++++++.+.++ .+.
T Consensus 47 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~-----------~~~~~~~~~~~~~~~~la~~l~~~~~----~~~ 111 (459)
T 4a6r_A 47 SEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEEL-----------PFYNTFFKTTHPAVVELSSLLAEVTP----AGF 111 (459)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHC-----------SCCCTTSSSCCHHHHHHHHHHHHHSC----TTC
T ss_pred CCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhc-----------cccccccccCCHHHHHHHHHHHHhCC----CCC
Confidence 445678999876 45543 345555444332110 01233333456778888888887654 467
Q ss_pred CcEEEecChHHHHHHHHHhhcC--------CCCeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCC--C-
Q 046900 121 NRIVVTAGATAANELLTFILAD--------PGDALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDS--S- 177 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~--~- 177 (442)
++|++|+|+++++..+++++.. +++.|++.+|+|.++...+....|. .+..++... .
T Consensus 112 ~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 191 (459)
T 4a6r_A 112 DRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKH 191 (459)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHH
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccC
Confidence 8999999999999999998875 5799999999999876554421111 222333211 0
Q ss_pred CCCcCC--------HHHHHHHHHHHHhcCCceeEEEEeCCC-CCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCC
Q 046900 178 NNFQIT--------PQALEAAYKEAESKDMRVRGVLITNPS-NPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAF 247 (442)
Q Consensus 178 ~~~~~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~ 247 (442)
+.+ +| +++|++.+.+... .++ ++++++|. |++|. +.+.+.+++|.++|++||+++|+||+|.++..
T Consensus 192 ~~~-~d~~~~~~~~~~~le~~i~~~~~--~~~-~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr 267 (459)
T 4a6r_A 192 GKD-MTPDEFGVVAARWLEEKILEIGA--DKV-AAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGR 267 (459)
T ss_dssp CTT-CCHHHHHHHHHHHHHHHHHHHCG--GGE-EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred Ccc-cCHHHHHHHHHHHHHHHHHHcCC--CCE-EEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 112 34 7888888864211 134 45666665 45555 55899999999999999999999999998766
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHH-----HccccCCCcHHHHHHHHHHh
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR-----RMSSFTLISSQTQYLLASML 322 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~-----~~~~~~~~s~~~q~~~~~~l 322 (442)
.+..+ .. .... .... +.+|||+++..|+|+||+++ ++.+.+.+. .....+..++++|.++.+.|
T Consensus 268 ~G~~~-~~-~~~~-----~~pd---i~t~sK~l~gg~~~lg~v~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal 336 (459)
T 4a6r_A 268 TGEWF-GH-QHFG-----FQPD---LFTAAKGLSSGYLPIGAVFV-GKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANV 336 (459)
T ss_dssp TSSSS-HH-HHHT-----CCCS---EEEECGGGGTTSSCCEEEEE-CHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHH
T ss_pred ccccc-hH-hhcC-----CCCC---eeehhhhhcCCCCCccceee-CHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHH
Confidence 66422 22 2211 1122 33789999744499999999 677777665 22234667889999988888
Q ss_pred cCchhHHHHHHHHH-HHHHHHHHHHHHHHHhCC-CeeecCCceEEEEEecCCcccc-----cChhhHHHHHHHHHHcCcE
Q 046900 323 SNKKFTENYIKTNR-ERLQKRYQMIIEGLRSAG-IECLKGNAGLFCWMNLSPLLEE-----QTREGELALWDSMLHEVKL 395 (442)
Q Consensus 323 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~l~~~l~~~~gi 395 (442)
+.... ++.+++.+ +.....++.+.+.|.+.+ +....+.| .|+++++...... .......++++.|+++ ||
T Consensus 337 ~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv 413 (459)
T 4a6r_A 337 AALRD-EGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVG-MVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRN-NL 413 (459)
T ss_dssp HHHHH-TCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEET-TEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHT-TE
T ss_pred HHHhc-chHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEE-EEEEEEEecCccccccccchHHHHHHHHHHHHHC-Ce
Confidence 73211 12233344 344444455545555443 44444554 4777776542110 0111256788888877 99
Q ss_pred EEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 396 NISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 396 ~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.+.|+. +++||++. ..+++++++++++|++++++...
T Consensus 414 ~v~~~g-------~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 414 IMRACG-------DHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQ 451 (459)
T ss_dssp ECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999862 68999954 33899999999999999987654
No 150
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.96 E-value=6.7e-29 Score=247.04 Aligned_cols=350 Identities=11% Similarity=0.068 Sum_probs=214.9
Q ss_pred CCCCceeeeeccc--cccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 45 TNPSGVIQMGLAE--NQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 45 ~~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
.....+||++.+. +.++ ++.+.+.+.+..... ....|+ .....+|++++++++. .+
T Consensus 52 ~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~----------~~~~~~-~~~~~~l~~~la~~~~---------~~ 111 (434)
T 3l44_A 52 VDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENG----------VLYGTP-TALEVKFAKMLKEAMP---------AL 111 (434)
T ss_dssp TTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHC----------SCCSSC-CHHHHHHHHHHHHHCT---------TC
T ss_pred CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhC----------cCCCCC-CHHHHHHHHHHHHhCC---------CC
Confidence 4456789998764 4443 455555544332110 012343 2345667676666542 47
Q ss_pred CcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCc------------CCHHH
Q 046900 121 NRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQ------------ITPQA 186 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~------------~d~~~ 186 (442)
++|++|+|+++++..+++.+.. +++.|++.+|+|.++...+....|.....+......++. -|++.
T Consensus 112 ~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 191 (434)
T 3l44_A 112 DKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVET 191 (434)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHH
T ss_pred CEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHH
Confidence 8999999999999999987754 678999999999887654432223222111111111110 17899
Q ss_pred HHHHHHHHHhcCCceeEEEEeCCC-CCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcC
Q 046900 187 LEAAYKEAESKDMRVRGVLITNPS-NPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQY 264 (442)
Q Consensus 187 l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~ 264 (442)
|++++++.. .+++ +++++|+ |++|.+. +.+.+++|.++|++||+++|+||+|.+| ..+.. ... ....-
T Consensus 192 le~~l~~~~---~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~-~~~-~~~~~--- 261 (434)
T 3l44_A 192 LKEALDKWG---HEVA-AILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYG-GAQ-DLLGV--- 261 (434)
T ss_dssp HHHHHHHHG---GGEE-EEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSS-CHH-HHHTC---
T ss_pred HHHHHHhCC---CCEE-EEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecccc-HHH-HHcCC---
Confidence 999997632 1444 5555564 5666655 8888999999999999999999999987 44432 122 22110
Q ss_pred CCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-----ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q 046900 265 KDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-----MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERL 339 (442)
Q Consensus 265 ~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 339 (442)
... +.||||.+| +|+|+||+++ ++.+.+.+.. ....+..+++++.++.+.++.... ++.+++.++..
T Consensus 262 --~~d---i~t~sK~~~-~G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~-~~~~~~~~~~~ 333 (434)
T 3l44_A 262 --TPD---LTALGKVIG-GGLPIGAYGG-KKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ-EGLYEKLDELG 333 (434)
T ss_dssp --CCS---EEEEEGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHH
T ss_pred --CCC---eeehhhhhc-CCcCeeeEEE-cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc-ccHHHHHHHHH
Confidence 111 458999998 8999999988 6666666554 223356788888888777762111 11222222322
Q ss_pred HHHHHHHHHHHHhCCCeeecCCceEEEEEecCCccc-c------cChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEE
Q 046900 340 QKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLE-E------QTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFR 412 (442)
Q Consensus 340 ~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~-~------~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iR 412 (442)
...++.+.+.+.+.++....+..|.++++.+..... . .......++++.|+++ ||.+.|+. .+++|
T Consensus 334 ~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~------~~~~r 406 (434)
T 3l44_A 334 ATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQE-GVNLAPSK------YEAWF 406 (434)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHT-TEECCSST------TCCEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHC-CeEEeecC------CCcEE
Confidence 333333433333344433333344577776632110 0 1112346788888777 99999864 24689
Q ss_pred EEeecCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 413 VCFANMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 413 ls~~~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
+++.. +++++++++++|++++++.+++
T Consensus 407 l~~~~-t~e~i~~~l~~l~~~l~~~~~~ 433 (434)
T 3l44_A 407 LTTEH-TKEDIEYTIEAVGRAFAALADN 433 (434)
T ss_dssp CCTTC-CHHHHHHHHHHHHHHHHHHHHC
T ss_pred Eeccc-CHHHHHHHHHHHHHHHHHHHhc
Confidence 98765 9999999999999999887653
No 151
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.96 E-value=8e-29 Score=245.74 Aligned_cols=327 Identities=14% Similarity=0.187 Sum_probs=223.8
Q ss_pred eeecccccccH-HHHHHHHHhCCCCcccCCCCCCCCcccccCC-CcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecCh
Q 046900 52 QMGLAENQVSF-DLLEEYLEQQPEASTWGKGAPGFRENALFQD-YHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGA 129 (442)
Q Consensus 52 ~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~ 129 (442)
+|+.++++++. +.+.+.+.+... ...|++ ..+..++|++++++++ .++|++|+|+
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~-------------~~~y~~~~~~~~~l~~~la~~~~----------~~~v~~~~gg 76 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALD-------------SQWLSNGGPLVREFEERVAGLAG----------VRHAVATCNA 76 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHH-------------HTCCSSSCHHHHHHHHHHHHHHT----------SSEEEEESCH
T ss_pred cccccCCCCCChHHHHHHHHHHHh-------------cCCcccCCHHHHHHHHHHHHHhC----------CCeEEEeCCH
Confidence 67888887754 344444443321 124776 6789999999999985 3589999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCC
Q 046900 130 TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNP 209 (442)
Q Consensus 130 ~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P 209 (442)
++++.+++.++. +||.|+++.|+|+.+...+.. .|++++.+++++ ++|.+|+++|++.+++ ++++|+++
T Consensus 77 t~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~-~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~-- 145 (424)
T 2po3_A 77 TAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRW-IGLTPVFADIDP-DTGNLDPDQVAAAVTP------RTSAVVGV-- 145 (424)
T ss_dssp HHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHH-TTCEEEEECBCT-TTSSBCHHHHGGGCCT------TEEEEEEE--
T ss_pred HHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHH-cCCEEEEEecCC-CcCCcCHHHHHHhhCc------CCcEEEEE--
Confidence 999999999985 789999999999999998885 899999999875 3578999999988754 78888876
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC-cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeE
Q 046900 210 SNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS-GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVG 288 (442)
Q Consensus 210 ~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~-~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG 288 (442)
||||...+ +++|+++|+++|++||+||+|+ .+.+++. ++.. ... +++.||||..+++|+|+|
T Consensus 146 -~~tG~~~~---l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~---------~~d-i~~~S~sk~K~l~~~~~G 208 (424)
T 2po3_A 146 -HLWGRPCA---ADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGS---------LGD-AEVFSFHATKAVNAFEGG 208 (424)
T ss_dssp -CGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTS---------SSS-EEEEECCTTSSSCCSSCE
T ss_pred -CCCCCcCC---HHHHHHHHHHcCCEEEEECccccCCeECCe---eccc---------ccC-EEEEeCCCCCCccCCCCe
Confidence 48998765 8888899999999999999999 4555442 1110 122 788999955566778999
Q ss_pred EEeecCHHHHHHHHHccccCC----------Cc-HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 046900 289 TIYSYNDKVVTTARRMSSFTL----------IS-SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIE 356 (442)
Q Consensus 289 ~i~~~~~~~~~~~~~~~~~~~----------~s-~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 356 (442)
|++++++.+.+.++.....+. .+ .+.+.+++..+.. .+.+++..++.++.++++.+.|.+. |++
T Consensus 209 ~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 284 (424)
T 2po3_A 209 AVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS----LDAFPEVIDRNRRNHAAYREHLADLPGVL 284 (424)
T ss_dssp EEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTCSCTTEE
T ss_pred EEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 999965676666554322110 00 1122222222221 2234556666777778888888876 777
Q ss_pred eec-CCce----EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC--------------CCCE-------
Q 046900 357 CLK-GNAG----LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS--------------EPGW------- 410 (442)
Q Consensus 357 ~~~-~~~g----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~--------------~~~~------- 410 (442)
+.. +.++ +++++.++..... .+..++.+.|.++ ||.+.+ .|... .+++
T Consensus 285 ~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~l~~~L~~~-gI~v~~--~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~ 358 (424)
T 2po3_A 285 VADHDRHGLNNHQYVIVEIDEATTG---IHRDLVMEVLKAE-GVHTRA--YFSPGCHELEPYRGQPHAPLPHTERLAARV 358 (424)
T ss_dssp ECCGGGGSCCCCCCEEEEECHHHHS---SCHHHHHHHHHHT-TEECBC--TTCSCGGGSTTTTTSCCCCCHHHHHHHTTE
T ss_pred ccCCCCCCccccEEEEEEECCccch---hhHHHHHHHHHHC-CCceec--ccCCccccchhhhhcCCCCChhHHHHhcCE
Confidence 765 4443 2344666530000 0256777777555 999987 22210 0122
Q ss_pred EEEEe-ecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 411 FRVCF-ANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 411 iRls~-~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+|+++ ...+++++++++++|++++++..+
T Consensus 359 l~l~~~~~~t~e~i~~~~~~L~~~~~~~~~ 388 (424)
T 2po3_A 359 LSLPTGTAIGDDDIRRVADLLRLCATRGRE 388 (424)
T ss_dssp EEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCCCCHHHHHHHHHHHHHHHhhhHH
Confidence 66663 244899999999999999876543
No 152
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.96 E-value=1.5e-28 Score=245.29 Aligned_cols=295 Identities=15% Similarity=0.169 Sum_probs=205.8
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----Hhhh
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWR 164 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~ 164 (442)
..|+ ..|.+ +++++++++.+.+| .+++++++|+++++..++. ++++||.|+++.|+|+.+... ++ .
T Consensus 125 ~~Y~-~~g~~-~~~~l~~~la~~~g------~~~~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~-~ 194 (464)
T 1ibj_A 125 YDYT-RSGNP-TRDALESLLAKLDK------ADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVP-R 194 (464)
T ss_dssp CSBT-TTCCH-HHHHHHHHHHHHHT------CSEEEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSG-G
T ss_pred cccc-CCCCH-HHHHHHHHHHHHhC------CCeEEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHH-H
Confidence 4565 34555 78899999888766 3477888888999998876 779999999999999998753 34 3
Q ss_pred cCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 165 TGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 165 ~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
.|++++.++++ |+++|++++++ ++++|++++|+||||.+++ +++|+++|++||+++|+||+|..
T Consensus 195 ~G~~v~~v~~~-------d~~~l~~~i~~------~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~ 258 (464)
T 1ibj_A 195 SGVVVKRVNTT-------KLDEVAAAIGP------QTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMS 258 (464)
T ss_dssp GTCEEEEECTT-------SHHHHHHHCCS------SEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTC
T ss_pred cCCEEEEeCCC-------CHHHHHHHhcc------CceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCcc
Confidence 79999999863 78999988753 7899999999999999997 88899999999999999999985
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC-CCceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL-PGFRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASM 321 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~-~G~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~ 321 (442)
... ..++ . .+..+++.|+||.++. +|+|+||++++++.+.+.+..... .+.++++.|.++...
T Consensus 259 g~~----~~~~-~---------~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~a 324 (464)
T 1ibj_A 259 PVL----SRPL-E---------LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRG 324 (464)
T ss_dssp TTT----CCGG-G---------TTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHH
T ss_pred ccc----CChh-h---------cCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 221 1111 1 1467889999999864 389999999976677666655442 245678888888877
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHH----------HHHHhC-CCeeecCC---ceEEEEEecCCcccccChhhHHHHHH
Q 046900 322 LSNKKFTENYIKTNRERLQKRYQMII----------EGLRSA-GIECLKGN---AGLFCWMNLSPLLEEQTREGELALWD 387 (442)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~~l~----------~~L~~~-g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~l~~ 387 (442)
++.... .+++..+......+++. +.|++. ++++..++ .|.++|++++. .+....+.+
T Consensus 325 l~~~~~---r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~------~~~~~~~~~ 395 (464)
T 1ibj_A 325 IKTMAL---RIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS------VALSKHLVE 395 (464)
T ss_dssp HTTHHH---HHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC------HHHHHHHHH
T ss_pred hhhHHH---HHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC------HHHHHHHHH
Confidence 775321 11221111211122221 223222 34444443 24477788742 112345666
Q ss_pred HHHHcCcEEEeCCC------------CCCC---------CCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 388 SMLHEVKLNISPGS------------SCHC---------SEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 388 ~l~~~~gi~v~pg~------------~f~~---------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
.|.. .||.+.+|. .|.. ..++++||+++. |++++++++|++++++
T Consensus 396 ~L~~-~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 396 TTKY-FSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFKT 461 (464)
T ss_dssp HCSS-SEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS---SCHHHHHHHHHHHHHS
T ss_pred hcCc-ceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHhh
Confidence 6644 599998886 2211 125789999986 6799999999998763
No 153
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=3.7e-28 Score=240.13 Aligned_cols=345 Identities=11% Similarity=0.059 Sum_probs=223.3
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecC
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAG 128 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G 128 (442)
+.|+|..++|+.++. +.+.+.+..... . + ..+.....|.......++++.+.+.+.+.++ +++++|++++|
T Consensus 26 ~~i~l~~~~~~~~~~-v~~a~~~~~~~~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g----~~~~~i~~~sG 96 (417)
T 3n0l_A 26 EGLEMIASENFTLPE-VMEVMGSILTNK-Y--A-EGYPGKRYYGGCEFVDEIETLAIERCKKLFN----CKFANVQPNSG 96 (417)
T ss_dssp HSEECCTTCCCCCHH-HHHHHTBGGGGC-C--C-CEETTEESSSCCHHHHHHHHHHHHHHHHHHT----CSEEECCCSSH
T ss_pred cCeeeecccCCCCHH-HHHHHhhhhhcc-c--c-ccCCCccccccchHHHHHHHHHHHHHHHHhC----CCCcceEeccH
Confidence 457888888877544 444444332110 0 0 0001112343444456777766666666655 56778988888
Q ss_pred hHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhh-hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 129 ATAANELLTFILADPGDALLVPTPYYPGFDR---DLRW-RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 129 ~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~-~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
++++.+++.+++++||.|+++.|+|..+.. .+.. ..++.+++++.+ .++.+|++.|++.+++. ++++|
T Consensus 97 -t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~-----~~~~v 168 (417)
T 3n0l_A 97 -SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKE-----KPKLI 168 (417)
T ss_dssp -HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHH-----CCSEE
T ss_pred -HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhc-----CCeEE
Confidence 799999999999999999999999987644 2221 134556666665 45779999999999742 78888
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC-cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS-GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP 283 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~-~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 283 (442)
++++|+| |.+++ +++|.++|++||++||+||+|. ...+.+..+..+ ....+++.|+||.+ +
T Consensus 169 ~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~-----------~~~di~~~s~sK~l--~ 230 (417)
T 3n0l_A 169 VCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPF-----------PYAHVVSSTTHKTL--R 230 (417)
T ss_dssp EECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCT-----------TTCSEEEEESSTTT--C
T ss_pred EECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCcc-----------ccceEEEeeCcccc--C
Confidence 8888886 77888 7889999999999999999964 222322211111 12247889999987 7
Q ss_pred CceeEEEeecCHHHHHHHHHccccC---CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-
Q 046900 284 GFRVGTIYSYNDKVVTTARRMSSFT---LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK- 359 (442)
Q Consensus 284 G~RiG~i~~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~- 359 (442)
|+|+||++++++.+.+.+......+ ..+...+.++...+.. ...+++++.++++.++++++.+.|.+.|+++..
T Consensus 231 g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 308 (417)
T 3n0l_A 231 GPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKF--NLSDEWKVYAKQVRTNAQVLANVLMDRKFKLVSD 308 (417)
T ss_dssp SCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH--HTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGG
T ss_pred CCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHHHHHHHHhCCceeccC
Confidence 8899999996577777766543332 2233444444433332 112345677888888999999999988888765
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCC----CCCEEEEEeec-----CCHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCS----EPGWFRVCFAN-----MSEQTLEVALKRI 430 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~----~~~~iRls~~~-----~~~e~i~~~l~~l 430 (442)
+..+.++|+.++.... +...+.+.| +++||.+.++..+... ....+|+++.. ++++++++++++|
T Consensus 309 ~~~~~~~~~~~~~~~~-----~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l 382 (417)
T 3n0l_A 309 GTDNHLVLMSFLDREF-----SGKDADLAL-GNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYI 382 (417)
T ss_dssp SCSSSEEEEECTTSSS-----CHHHHHHHH-HHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCceEEEEEcccCCC-----CHHHHHHHH-HHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHH
Confidence 2345688888764211 245555555 4559999976543221 23569999852 3679999999999
Q ss_pred HHHHHH
Q 046900 431 HNFMQK 436 (442)
Q Consensus 431 ~~~l~~ 436 (442)
++++++
T Consensus 383 ~~~l~~ 388 (417)
T 3n0l_A 383 ADILDD 388 (417)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999864
No 154
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.96 E-value=6.7e-29 Score=245.50 Aligned_cols=283 Identities=11% Similarity=0.069 Sum_probs=203.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc------CCCCeE-EEcCCCCcChHHhHhh---hc
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA------DPGDAL-LVPTPYYPGFDRDLRW---RT 165 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~------~~gd~V-l~~~p~y~~~~~~~~~---~~ 165 (442)
...++++.++++++ +++++|++|+|+++++..++.+++ ++||.| +++.++|+.+...+.. ..
T Consensus 72 ~~~~l~~~la~~~g--------~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~ 143 (416)
T 1qz9_A 72 LSERLGNRLATLIG--------ARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADML 143 (416)
T ss_dssp HHHHHHHHHHTTTT--------CCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC--------CCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHh
Confidence 44667777777653 567899999999999998888876 899875 5555677765443221 13
Q ss_pred --CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 166 --GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 166 --G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
|++++.+++ +++|++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+
T Consensus 144 ~~g~~~~~v~~---------~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~ 205 (416)
T 1qz9_A 144 QQGYTLRLVDS---------PEELPQAIDQ------DTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHS 205 (416)
T ss_dssp CSSCEEEEESS---------GGGHHHHCST------TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTT
T ss_pred cCCceEEEeCc---------HHHHHHHhCC------CceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEcccc
Confidence 999988874 5778887753 7899999999999999998 7888899999999999999998
Q ss_pred cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHc------------------
Q 046900 244 GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRM------------------ 304 (442)
Q Consensus 244 ~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~------------------ 304 (442)
. +. ...++..+ +..+++.|+||.++ +|.++ ||++++++ +.+.++..
T Consensus 206 ~---g~-~~~~~~~~---------~~d~~~~s~~K~l~-~g~~~~g~l~~~~~-~~~~l~~~~~g~~g~~~~~~~~~~~~ 270 (416)
T 1qz9_A 206 A---GA-VPVDLHQA---------GADYAIGCTYKYLN-GGPGSQAFVWVSPQ-LCDLVPQPLSGWFGHSRQFAMEPRYE 270 (416)
T ss_dssp T---TT-SCCCHHHH---------TCSEEEECSSSTTC-CCTTCCCEEEECTT-TTTTSCCSCCCGGGBCTTSCCCSSCC
T ss_pred c---cC-cCCChhhc---------CCCEEEecCcccCC-CCCCCeEEEEECHH-HHhccCCCccccCccccccCCCCccC
Confidence 3 22 22233322 23377899999985 78888 99999544 33322221
Q ss_pred -------cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCC----ceEEEEEe
Q 046900 305 -------SSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA----GIECLKGN----AGLFCWMN 369 (442)
Q Consensus 305 -------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~----~g~~~~~~ 369 (442)
...+..+...+.++.+.++... ..++++.+++++++++++.+.|.+. |+++..+. .+.++|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~ 348 (416)
T 1qz9_A 271 PSNGIARYLCGTQPITSLAMVECGLDVFA--QTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFE 348 (416)
T ss_dssp BCSSGGGGCCSCCCHHHHHHHHHHHHHHT--TSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEE
T ss_pred CCcchHHhcCCCCCHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEe
Confidence 0123345556655555554211 1235677888889999999999876 88887663 24578998
Q ss_pred cCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee--cCCHHHHHHHHHHHHHHHHHH
Q 046900 370 LSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA--NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 370 ~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~e~i~~~l~~l~~~l~~~ 437 (442)
++. ..++.+.|.++ ||.+.. ...+++||+++ ..+++++++++++|++++++.
T Consensus 349 ~~~---------~~~l~~~l~~~-gi~~~~------~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 349 HPE---------GYAVIQALIDR-GVIGDY------REPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp CTT---------HHHHHHHHHTT-TEECEE------ETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cCC---------HHHHHHHHHhC-CcEecc------CCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 864 45788888766 998753 13578999996 458999999999999998763
No 155
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.96 E-value=9.7e-29 Score=239.86 Aligned_cols=288 Identities=13% Similarity=0.123 Sum_probs=206.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCC-c-EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcCh--HHhHhhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLN-R-IVVTAGATAANELLTFILADPGDALLVPTPYYPGF--DRDLRWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~-~-i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~~G~~v~~ 171 (442)
+..++++++.+.+.+.+| ++++ + +++|+|+++++..++.+++++||+|+++.+.+... ...++. .| +++.
T Consensus 46 ~~~~~~~~~~~~la~~~g----~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~-~g-~~~~ 119 (362)
T 2c0r_A 46 VYEAVHNEAQARLLALLG----NPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKL-IG-DTHV 119 (362)
T ss_dssp HHHHHHHHHHHHHHHHTT----CCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHH-HS-CEEE
T ss_pred HHHHHHHHHHHHHHHHhC----CCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHH-hC-CeEE
Confidence 446677888888877766 4554 6 57789999999999999999999999887664432 345553 79 9999
Q ss_pred EecCCC--CCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 172 IHCDSS--NNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 172 v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
++++.+ .++.+|.++++ ++ .++|+|++++|+||||.+++ ++++| +|+++|+|++|+.+..
T Consensus 120 v~~~~~~~~~~~~~~~~~~--i~------~~t~~v~~~~~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~-- 181 (362)
T 2c0r_A 120 AASSEASNYMTLPKLQEIQ--LQ------DNAAYLHLTSNETIEGAQFK--AFPDT------GSVPLIGDMSSDILSR-- 181 (362)
T ss_dssp EEECGGGTTCSCCCGGGCC--CC------TTEEEEEEESEETTTTEECS--SCCCC------TTSCEEEECTTTTTSS--
T ss_pred EecccccccccCCCHHHcc--cC------CCcCEEEEeCCcCccceecc--ccccc------CCCEEEEEChhhccCC--
Confidence 988632 23335665543 32 37899999999999999754 24444 7999999999985432
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--------------ccccCCCcHHHH
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--------------MSSFTLISSQTQ 315 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--------------~~~~~~~s~~~q 315 (442)
..++ .+ . .+++.|+||.+|++| +||++++++ +.+.+.. ....++.+.+.|
T Consensus 182 --~~~~----~~-----~--d~~~~s~~K~~g~~G--~G~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 245 (362)
T 2c0r_A 182 --PFDL----NQ-----F--GLVYAGAQKNLGPSG--VTVVIVRED-LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGI 245 (362)
T ss_dssp --CCCG----GG-----C--SEEEEETTTTTCCSS--CEEEEEEGG-GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHH
T ss_pred --ccch----hH-----C--cEEEEeccccccCcC--cEEEEEcHH-HHhhccccCchHHhHHHHhhccCcCCCchHHHH
Confidence 1121 11 1 267789999999888 899999543 3322221 122355677788
Q ss_pred HHHHHHhcCchhHHH--HHHHHHHHHHHHHHHHHHHHHhCC-C-eeec---CCceEEEEEecCCcccccChhhHHHHHHH
Q 046900 316 YLLASMLSNKKFTEN--YIKTNRERLQKRYQMIIEGLRSAG-I-ECLK---GNAGLFCWMNLSPLLEEQTREGELALWDS 388 (442)
Q Consensus 316 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (442)
.++..+++. ..+ .+++.+++++++++++.+.|++.| + ++.. ..++.++|+.++... +..++++.
T Consensus 246 ~a~~~al~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 316 (362)
T 2c0r_A 246 YMVNEVLKW---IEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEE------LEKEFVKA 316 (362)
T ss_dssp HHHHHHHHH---HHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHH------HHHHHHHH
T ss_pred HHHHHHHHH---HHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCcc------hHHHHHHH
Confidence 888877763 222 467888999999999999999887 6 6642 123456788886421 35678888
Q ss_pred HHHcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHH
Q 046900 389 MLHEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 389 l~~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~ 437 (442)
|.++ ||.+.||..| .+++|||++. .++++++++++.|+++++++
T Consensus 317 L~~~-gi~~~~g~~~----~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 317 SEQE-GFVGLKGHRS----VGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp HHHT-TEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHC-CCeeccCCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 7665 9999998765 3579999973 27899999999999998765
No 156
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=6.2e-28 Score=239.07 Aligned_cols=345 Identities=13% Similarity=0.116 Sum_probs=210.8
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHH-HHHHHHhCCCCccCCCcEEEec
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMA-SFMEQIRGGRAKFDLNRIVVTA 127 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia-~~l~~~~~~~~~~~~~~i~~t~ 127 (442)
+.|+|..++|+++ +.+.+.+.+..... ...+ ......|+.. ...++++.++ +.+.+..+ .+. ..++++
T Consensus 33 ~~i~l~~~~~~~~-~~v~~a~~~~~~~~-~~~~---~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~----~~~-~~v~~~ 101 (425)
T 3ecd_A 33 SQVELIASENIVS-RAVLDAQGSVLTNK-YAEG---YPGKRYYGGC-EFADEVEALAIERVKRLFN----AGH-ANVQPH 101 (425)
T ss_dssp HSEECCTTCCCCC-HHHHHHHTSGGGSS-CTTC----------------CCHHHHHHHHHHHHHHT----CSE-EECCCS
T ss_pred cceeeecccCCCC-HHHHHHHhhhhhcc-cccC---CCcchhcCCC-hHHHHHHHHHHHHHHHHhC----CCC-ceeecC
Confidence 4578888888774 44444444332110 0000 0001112221 1112334443 55555444 232 234588
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEcCCCCcC---hHHhHhhhcCc--EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 128 GATAANELLTFILADPGDALLVPTPYYPG---FDRDLRWRTGI--KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 128 G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~~G~--~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
|+++++..++.+++++||.|+++.|+|+. +...... .|. ++++++.++ +++.+|++.|++.+++. +++
T Consensus 102 ~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~-----~~~ 174 (425)
T 3ecd_A 102 SGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPAL-SGKWFNALQYGVSR-DTMLIDYDQVEALAQQH-----KPS 174 (425)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEECC-------------------CEEEEECCCT-TTSSCCHHHHHHHHHHH-----CCS
T ss_pred chHHHHHHHHHHccCCCCEEEEcccccccceecchhhhh-cccceeeeecCCCc-ccCccCHHHHHHHHhhc-----CCc
Confidence 88899999999999999999999999987 2222221 344 555666553 35789999999999742 788
Q ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc-CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCC
Q 046900 203 GVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG-SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLG 281 (442)
Q Consensus 203 ~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~-~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g 281 (442)
+|++++|+||+. .+ +++|.++|++||++||+||+|.. +.+.+..+..+ . ...+++.|+||.+
T Consensus 175 ~v~~~~~~~~~~--~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~----~-------~~di~~~s~sK~l- 237 (425)
T 3ecd_A 175 LIIAGFSAYPRK--LD---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPV----E-------HAHVVTSTTHKTL- 237 (425)
T ss_dssp EEEEECSCCCSC--CC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG----G-------TCSEEEEESSGGG-
T ss_pred EEEEccccCCCc--CC---HHHHHHHHHHcCCEEEEECcChHhhhhcccccCch----h-------cCcEEEecCCccc-
Confidence 999999999753 33 68999999999999999999542 22333222111 1 1127789999988
Q ss_pred CCCceeEEEeecCHHHHHHHHHccccC---CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 046900 282 LPGFRVGTIYSYNDKVVTTARRMSSFT---LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECL 358 (442)
Q Consensus 282 ~~G~RiG~i~~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 358 (442)
+|+|+||++++++.+.+.+......+ ......+.++...+.. ...+++++.+++++++++++.+.|.+.|+++.
T Consensus 238 -~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 314 (425)
T 3ecd_A 238 -RGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGE--ALTDDFKTYIDRVLANAQALGDVLKAGGVDLV 314 (425)
T ss_dssp -CCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHH--HTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEG
T ss_pred -CCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHhCCCeec
Confidence 67899999997677776665433221 2233333333333221 11234567788889999999999999898887
Q ss_pred cC-CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEe----CCCCCCCCCCCEEEEEeec-----CCHHHHHHHHH
Q 046900 359 KG-NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNIS----PGSSCHCSEPGWFRVCFAN-----MSEQTLEVALK 428 (442)
Q Consensus 359 ~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~----pg~~f~~~~~~~iRls~~~-----~~~e~i~~~l~ 428 (442)
.+ .+++++|+.++.... +...+.+.| +++||.+. ||..+....++++|+++.. .++++++++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~l-~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~ 388 (425)
T 3ecd_A 315 TGGTDNHLLLVDLRPKGL-----KGAQVEQAL-ERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGR 388 (425)
T ss_dssp GGSCSSSEEEEECGGGTC-----CHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHH
T ss_pred cCCCCceEEEEEeCCCCC-----CHHHHHHHH-HHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHH
Confidence 54 467788888764211 244555666 44599999 5543333334689999542 24799999999
Q ss_pred HHHHHHHHH
Q 046900 429 RIHNFMQKR 437 (442)
Q Consensus 429 ~l~~~l~~~ 437 (442)
.|++++++.
T Consensus 389 ~l~~~l~~~ 397 (425)
T 3ecd_A 389 LILEVFEAL 397 (425)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcc
Confidence 999998875
No 157
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.8e-29 Score=252.40 Aligned_cols=310 Identities=12% Similarity=0.099 Sum_probs=227.8
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC-----CC---CeEEEcCCCCcChHHhH
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD-----PG---DALLVPTPYYPGFDRDL 161 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~-----~g---d~Vl~~~p~y~~~~~~~ 161 (442)
.|....|..++++.+++++.+.+| .+.+++++++|+|+++++.+++.++++ +| |.|+++.|+|..+...+
T Consensus 98 ~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~ 175 (497)
T 3mc6_A 98 HPDVFPAVRKMESEVVSMVLRMFN--APSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAA 175 (497)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTT--CCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHH
T ss_pred CcccChHHHHHHHHHHHHHHHHhC--CCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHH
Confidence 455567888999999999999877 223478999999999999999998865 46 89999999999999999
Q ss_pred hhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 162 RWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 162 ~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
.. .|++++.+|+++ +++.+|+++|++++.+ ++++|++++|+||||.+.+ +++|.++|++||+++|+|++
T Consensus 176 ~~-~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~livD~a 244 (497)
T 3mc6_A 176 YY-FGMKLRHVELDP-TTYQVDLGKVKKFINK------NTVLLVGSAPNFPHGIADD---IEGLGKIAQKYKLPLHVDSC 244 (497)
T ss_dssp HH-SCCEEEEECBCT-TTCSBCTTTTGGGCCS------SEEEEEEETTCTTTCCCCS---CTTTTTHHHHTTCCEEEETT
T ss_pred HH-cCCeEEEEecCc-ccCcCCHHHHHHHHhh------CCEEEEEECCCCCCCcCCC---HHHHHHHHHHhCCEEEEECc
Confidence 85 899999999875 3578999999998864 7899999999999999988 67888899999999999999
Q ss_pred CCcCCCC-----CCCcc-cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCC-----
Q 046900 242 YSGSAFS-----SSEFV-SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLI----- 310 (442)
Q Consensus 242 y~~~~~~-----~~~~~-s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~----- 310 (442)
|+.+... +.... ++ ... ..+..+++.|++|.++ +|.++||++++++.+..........+..
T Consensus 245 ~~~~~~~f~~~~~~~~~~~~-~~~------~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (497)
T 3mc6_A 245 LGSFIVSFMEKAGYKNLPLL-DFR------VPGVTSISCDTHKYGF-APKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGS 316 (497)
T ss_dssp TTHHHHGGGTTTTCCSCCCC-STT------STTCCEEEEETTTTTC-CCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCC
T ss_pred chhhhhhhhhhhcccCCccc-ccc------CCCCcEEEECchhhcC-CCCCceeEEecCHHHHhhhhcccccccCCCcCC
Confidence 9854321 00000 00 000 1234577889999874 7889999999766544331111111100
Q ss_pred -------c---HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeec-CCceEEEEEecCCccccc
Q 046900 311 -------S---SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA--GIECLK-GNAGLFCWMNLSPLLEEQ 377 (442)
Q Consensus 311 -------s---~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~-~~~g~~~~~~~~~~~~~~ 377 (442)
+ ..++.++...+.. ..+++..++..++++++.+.|.+. |+++.. +.++ ++++..+..
T Consensus 317 ~~~~g~~~~~~~~a~~aal~~l~~-----~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~-~v~~~~~~~---- 386 (497)
T 3mc6_A 317 PTLAGSRPGAIVVGCWATMVNMGE-----NGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYS-VISFSSKTL---- 386 (497)
T ss_dssp SSSCSSCBHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSS-EEEEECTTT----
T ss_pred cCcccCCcchhHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCee-EEEEeCCCC----
Confidence 0 2345555555442 234667777888889999999984 888874 4555 444454421
Q ss_pred ChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 378 TREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 378 ~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+..++.+.|.++ ||.+.++.. +..+|+++...+++++++++++|++++++..+
T Consensus 387 ---~~~~l~~~L~~~-Gi~v~~~~~-----~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 387 ---NIHELSDRLSKK-GWHFNALQK-----PVALHMAFTRLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp ---THHHHHHHHHTT-TCBCEECCS-----SCCEEEECCTTTTCTHHHHHHHHHHHHHHHTC
T ss_pred ---CHHHHHHHHHhC-CEEEecCCC-----CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHh
Confidence 367888888776 999887543 34689999866899999999999999987654
No 158
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.96 E-value=3.1e-28 Score=243.19 Aligned_cols=353 Identities=12% Similarity=0.054 Sum_probs=216.8
Q ss_pred CCCCCceeeeecc--cccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLA--ENQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+||++.+ .+.+ +++.+.+.+.+.... ...|....+..+.+.++++++.+..+ ..
T Consensus 40 d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~------------~~~~~~~~~~~~~~~~la~~l~~~~~----~~ 103 (448)
T 3dod_A 40 DINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGK------------IAHSTLLGMTNVPATQLAETLIDISP----KK 103 (448)
T ss_dssp ETTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTT------------CSCCCCSSSEEHHHHHHHHHHHHHSC----TT
T ss_pred ECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHh------------ccCccccccCCHHHHHHHHHHHHhCC----CC
Confidence 3445678999875 3333 235555555543221 11232334556788888888887643 34
Q ss_pred CCcEEEecChHHHHHHHHHhhcC----CC----CeEEEcCCCCcChHHhHhhhcCc------------EEEEEecCCCCC
Q 046900 120 LNRIVVTAGATAANELLTFILAD----PG----DALLVPTPYYPGFDRDLRWRTGI------------KIVPIHCDSSNN 179 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~----~g----d~Vl~~~p~y~~~~~~~~~~~G~------------~v~~v~~~~~~~ 179 (442)
.++|++|+|+++++..+++++.. +| |.|++.+|+|.++...+....|. .+..++.+ ..
T Consensus 104 ~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 181 (448)
T 3dod_A 104 LTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YV 181 (448)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CC
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--cc
Confidence 68999999999999999988865 44 99999999998766443311221 22333332 22
Q ss_pred CcC-----------CHHHHHHHHHHHHhcCCceeEEEEeCCC-CCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 180 FQI-----------TPQALEAAYKEAESKDMRVRGVLITNPS-NPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 180 ~~~-----------d~~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
|.. |+++|++.+++.. .++++|++..++ |++|. +.+.+.+++|.++|++||+++|+||+|.++.
T Consensus 182 ~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g 258 (448)
T 3dod_A 182 YRSESGDPDECRDQCLRELAQLLEEHH---EEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFG 258 (448)
T ss_dssp TTSSSCCHHHHHHHHHHHHHHHHHHHG---GGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred ccCCccchhhhhHHHHHHHHHHHHhCC---CCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Confidence 322 3788999887421 255555555555 88885 5677889999999999999999999999876
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH-------c--cccCCCcHHHHH
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR-------M--SSFTLISSQTQY 316 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~-------~--~~~~~~s~~~q~ 316 (442)
+.+..+ ..... +....+.+|||+++ .| +|+||+++ ++.+.+.+.. . ...+..+++++.
T Consensus 259 ~~g~~~-a~~~~---------~~~~di~t~sK~l~-~G~~~ig~v~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a 326 (448)
T 3dod_A 259 RTGKMF-ACEHE---------NVQPDLMAAGKGIT-GGYLPIAVTFA-TEDIYKAFYDDYENLKTFFHGHSYTGNQLGCA 326 (448)
T ss_dssp TTSSSS-GGGGG---------TCCCSEEEECGGGG-TTSSCCEEEEE-EHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHH
T ss_pred cccchh-hhhhc---------CCCCCEEEeccccc-CCcCceEEEEE-CHHHHHHhhhccccCCcccccCCCCcCHHHHH
Confidence 655432 11111 11111347899998 69 59999999 5667666644 2 233566888888
Q ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCccccc-C----hhhHHHHHHHHHH
Q 046900 317 LLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQ-T----REGELALWDSMLH 391 (442)
Q Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~-~----~~~~~~l~~~l~~ 391 (442)
++.+.|+.... ++.+++.++..+..++.+.+ +.+.+........|+++|+.++...... . .....+++..|++
T Consensus 327 aa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 404 (448)
T 3dod_A 327 VALENLALFES-ENIVEQVAEKSKKLHFLLQD-LHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRE 404 (448)
T ss_dssp HHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHH-HTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHH-HhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHH
Confidence 88888763211 12233344444444455555 5444322222334558888886532110 0 0013678888887
Q ss_pred cCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 392 EVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 392 ~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+ ||.+.|+ .+++||+++ ..+++++++++++|++++++...
T Consensus 405 ~-Gv~~~~~-------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 405 L-GMLTRPL-------GDVIAFLPPLASTAEELSEMVAIMKQAIHEVTS 445 (448)
T ss_dssp T-TEECCEE-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred C-CcEEecc-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 7 9999986 268999754 33899999999999999987654
No 159
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.96 E-value=3.8e-28 Score=242.61 Aligned_cols=358 Identities=11% Similarity=0.025 Sum_probs=220.9
Q ss_pred CCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+|||+.+ .+.++ ++.+.+.+.+.... ...|....+..+++.++++++.+..+. ..
T Consensus 57 d~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~------------~~~~~~~~~~~~~~~~la~~l~~~~~~---~~ 121 (451)
T 3oks_A 57 DVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGD------------FTHTCFMVTPYEGYVAVCEQLNRLTPV---RG 121 (451)
T ss_dssp ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTT------------CSCCTTTTSCCHHHHHHHHHHHHHSSC---CS
T ss_pred ECCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHh------------cccccCCccCCHHHHHHHHHHHHhCCc---CC
Confidence 3445678999876 44443 35555555443211 123443345567788888888776431 12
Q ss_pred CCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcC-------------cEEEEEecCCC-------
Q 046900 120 LNRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTG-------------IKIVPIHCDSS------- 177 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G-------------~~v~~v~~~~~------- 177 (442)
.++|++|+|+++++..+++.+.. .++.|++..++|.++...+....| ..+..+|....
T Consensus 122 ~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 201 (451)
T 3oks_A 122 DKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFG 201 (451)
T ss_dssp SEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGC
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccc
Confidence 57899999999999999987653 458999999999887654432111 13445544310
Q ss_pred -CCCcC---CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCC--cCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 178 -NNFQI---TPQALEAAYKEAESKDMRVRGVLITNPSNPLG--ATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 178 -~~~~~---d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG--~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
+.-.. +++.+++.+++.. +.+..++++++|.|++| .+.+.+.+++|.++|++||+++|+||+|.++.+.+..
T Consensus 202 ~~~~~~~~~~~~~~~~~l~~~~--~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~ 279 (451)
T 3oks_A 202 KELATDGELAAKRAITVIDKQI--GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAM 279 (451)
T ss_dssp TTTTTCHHHHHHHHHHHHHHHT--CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred cccchhhHHHHHHHHHHHHhhc--CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccc
Confidence 00001 2444445554321 12344677778877665 3446777999999999999999999999987665542
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHH
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
+ ....... ... +.||||+++ .|+|+||+++ ++.+.+.+.. ....+..++++|.++.+.++.... +
T Consensus 280 ~-~~~~~~~------~pd---i~t~sK~l~-~G~~iG~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~ 346 (451)
T 3oks_A 280 F-ACEHEGI------DPD---LIVTAKGIA-GGLPLSAVTG-RAEIMDSPHVSGLGGTYGGNPIACAAALATIETIES-E 346 (451)
T ss_dssp S-GGGGGTC------CCS---EEEECGGGG-TTSSCEEEEE-EHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHH-T
T ss_pred h-hhhhcCC------CCC---eeeehhhhh-CCcceEEEEE-CHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhh-h
Confidence 2 1111110 122 338999998 6999999999 5666655543 233466788999988888763211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcc-cccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCC
Q 046900 330 NYIKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLL-EEQTREGELALWDSMLHEVKLNISPGSSCHCSEP 408 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~ 408 (442)
+++++.++.....++.+.+.+.+..........|.|+|+++.... .........+++..|+++ ||.+.|+..|+
T Consensus 347 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~~---- 421 (451)
T 3oks_A 347 GLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAA-GVIVLSCGTYG---- 421 (451)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHT-TEECEEECTTS----
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhC-CcEEecCCCCC----
Confidence 122333333333344444444444322222333558888773310 001122466788888777 99999976553
Q ss_pred CEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 409 GWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 409 ~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
+++|++++ ..+++++++++++|++++++
T Consensus 422 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 422 NVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 58999876 33899999999999998863
No 160
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.96 E-value=6.8e-28 Score=239.57 Aligned_cols=334 Identities=15% Similarity=0.156 Sum_probs=209.9
Q ss_pred CCCCceeeeecccc--cc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 45 TNPSGVIQMGLAEN--QV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 45 ~~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
.....+|||+.+.+ .+ +++.+.+.+.+....... ....|+ .....+|++.+++++ + .
T Consensus 62 ~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~--------~~~~~~-~~~~~~l~~~la~~~----g------~ 122 (433)
T 1z7d_A 62 VNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTI--------CSRAFF-SVPLGICERYLTNLL----G------Y 122 (433)
T ss_dssp TTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSC--------CCTTSE-EHHHHHHHHHHHHHH----T------C
T ss_pred CCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCC--------ccCCcC-CHHHHHHHHHHHhhc----C------C
Confidence 34557889887543 43 345555555544321000 001131 112345555555543 2 5
Q ss_pred CcEEEecChHHHHHHHHHhhc---------CCC-CeEEEcCCCCcChHHh-HhhhcC------------cEEEEEecCCC
Q 046900 121 NRIVVTAGATAANELLTFILA---------DPG-DALLVPTPYYPGFDRD-LRWRTG------------IKIVPIHCDSS 177 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~---------~~g-d~Vl~~~p~y~~~~~~-~~~~~G------------~~v~~v~~~~~ 177 (442)
++|++|+|+++++..+++++. .+| |.|++.+|+|.++... +.. .| .+++.+|.
T Consensus 123 ~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~-~g~~~~~~~~~p~~~~v~~~~~--- 198 (433)
T 1z7d_A 123 DKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISA-STTKKCTSNFGPFAPQFSKVPY--- 198 (433)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------------CEEEECT---
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcc-cCCccccccCCCCCCCeEEeCC---
Confidence 799999999999999988753 467 9999999999876442 331 33 23444443
Q ss_pred CCCcCCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccH
Q 046900 178 NNFQITPQALEAAYKEAESKDMRVRGVLITNP-SNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSI 255 (442)
Q Consensus 178 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~ 255 (442)
.|++.|++.++. .++++ ++++| +|+||.+ ++.+.+++|.++|++||+++|+||+|.++.+.+..+ ..
T Consensus 199 ----~d~~~le~~l~~-----~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~-~~ 267 (433)
T 1z7d_A 199 ----DDLEALEEELKD-----PNVCA-FIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CV 267 (433)
T ss_dssp ----TCHHHHHHHHTS-----TTEEE-EEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GG
T ss_pred ----CCHHHHHHHhCC-----CCEEE-EEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcch-hh
Confidence 278999998841 26665 45556 5778975 688899999999999999999999998765544321 11
Q ss_pred HHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHHHHH
Q 046900 256 AEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSNKKFTENYI 332 (442)
Q Consensus 256 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~ 332 (442)
.... ....+ .||||.+| +| +|+||+++ ++.+.+.+.. ....+..+++++.++.+.++... +
T Consensus 268 ~~~~------~~~di---~t~sK~l~-~G~~~~G~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~---~-- 331 (433)
T 1z7d_A 268 HHYN------VKPDV---ILLGKALS-GGHYPISAVLA-NDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLI---N-- 331 (433)
T ss_dssp GGGT------CCCSE---EEECGGGG-TTSSCCEEEEE-CHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHH---H--
T ss_pred HhcC------CCCCE---EEECcccc-CCCCCeEEEEE-CHHHHhhhccccccccCCCCHHHHHHHHHHHHHHH---h--
Confidence 1110 01222 38999998 89 99999999 4566555443 22235567888888777775321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhC--CCee--ecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCC
Q 046900 333 KTNRERLQKRYQMIIEGLRSA--GIEC--LKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEP 408 (442)
Q Consensus 333 ~~~~~~~~~~~~~l~~~L~~~--g~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~ 408 (442)
....++++++++++.+.|++. ++.. ..+..|.++|++++... .+..++++.|+++ ||.+.|+ ..
T Consensus 332 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~l~~~-Gv~v~~~------~~ 399 (433)
T 1z7d_A 332 EKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNEL-----VNVLDICLKLKEN-GLITRDV------HD 399 (433)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTT-----CCHHHHHHHHHHT-TEECCEE------TT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccCh-----hHHHHHHHHHHHC-CeEEecC------CC
Confidence 134455666677777777653 3322 12234568888887521 1256788888876 9999985 24
Q ss_pred CEEEEEee-cCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 409 GWFRVCFA-NMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 409 ~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
+++|++++ ..+++++++++++|++++++...|
T Consensus 400 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 432 (433)
T 1z7d_A 400 KTIRLTPPLCITKEQLDECTEIIVKTVKFFDER 432 (433)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred CEEEEECCcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 68999876 348999999999999999876554
No 161
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.96 E-value=6.1e-28 Score=240.27 Aligned_cols=330 Identities=13% Similarity=0.129 Sum_probs=220.8
Q ss_pred CCCceeeeeccccc--c--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 46 NPSGVIQMGLAENQ--V--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 46 ~~~~~i~l~~~~n~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
.+..+|||..+.+. + +++.+.+.+.+....... ....|+ .....++++.++++++ .+
T Consensus 74 ~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~--------~~~~~~-~~~~~~l~~~la~~~g----------~~ 134 (439)
T 2oat_A 74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTL--------TSRAFY-NNVLGEYEEYITKLFN----------YH 134 (439)
T ss_dssp TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSC--------CCTTSE-ESSHHHHHHHHHHHHT----------CS
T ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCc--------ccCccC-CHHHHHHHHHHHHhcC----------CC
Confidence 34568899886543 3 345555555543321100 001232 1234666666666642 57
Q ss_pred cEEEecChHHHHHHHHHhhc---------CCC-CeEEEcCCCCcChHH-hHhhhcC------------cEEEEEecCCCC
Q 046900 122 RIVVTAGATAANELLTFILA---------DPG-DALLVPTPYYPGFDR-DLRWRTG------------IKIVPIHCDSSN 178 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~---------~~g-d~Vl~~~p~y~~~~~-~~~~~~G------------~~v~~v~~~~~~ 178 (442)
+|++++|+++++..+++++. .+| |.|++.+|+|.+... .+.. .| .+++.+|.
T Consensus 135 ~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~-~g~~~~~~~~~p~~~~v~~~~~---- 209 (439)
T 2oat_A 135 KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISS-STDPTSYDGFGPFMPGFDIIPY---- 209 (439)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTT-CCCHHHHTTSCSCCTTEEEECS----
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhc-CCChhcccCCCCCCCCeEEeCC----
Confidence 89999999999999998864 357 899999999987643 3332 34 45666653
Q ss_pred CCcCCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 179 NFQITPQALEAAYKEAESKDMRVRGVLITNP-SNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 179 ~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
.|++.|++.++. .++++| +++| +|++|. +.+.+.+++|.++|++||+++|+||+|.++.+.+..+ .+
T Consensus 210 ---~d~~~le~~l~~-----~~~~~v-i~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~- 278 (439)
T 2oat_A 210 ---NDLPALERALQD-----PNVAAF-MVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AV- 278 (439)
T ss_dssp ---SCHHHHHHHTTS-----TTEEEE-EECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GG-
T ss_pred ---CCHHHHHHHhCC-----CCEEEE-EEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hH-
Confidence 278999998841 256554 4556 567896 5688999999999999999999999998765555322 11
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcCchhHHHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSNKKFTENYIK 333 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 333 (442)
+... ....+ .||||.+| +| +|+||+++ ++.+.+.+.. ....+..+++++.++.+.++... + .
T Consensus 279 ~~~~-----~~~Di---~t~sK~l~-~G~~~~G~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~---~--~ 343 (439)
T 2oat_A 279 DYEN-----VRPDI---VLLGKALS-GGLYPVSAVLC-DDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLE---E--E 343 (439)
T ss_dssp GGGT-----CCCSE---EEECGGGG-TTSSCCEEEEE-CHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHH---H--T
T ss_pred HHhC-----CCCcE---EEeccccc-CCCCCeEEEEE-CHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHh---h--h
Confidence 1100 01222 29999998 79 99999999 4566555443 22235567888887777775321 1 2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeee--cCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEE
Q 046900 334 TNRERLQKRYQMIIEGLRSAGIECL--KGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWF 411 (442)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~i 411 (442)
...++++++++++.+.|++.++.+. .+..|+++|++++.... .+..++++.|+++ ||.+.|+ .++++
T Consensus 344 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~----~~~~~l~~~l~~~-Gv~v~~~------~~~~i 412 (439)
T 2oat_A 344 NLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKD----WDAWKVCLRLRDN-GLLAKPT------HGDII 412 (439)
T ss_dssp THHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEEEEECCCSS----CCHHHHHHHHHHT-TEECCBS------SSSEE
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEEEEEEecCcc----HHHHHHHHHHHHC-CeEEecC------CCCEE
Confidence 3566777888889999987654431 23345688888875310 1256888888876 9999984 25789
Q ss_pred EEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 412 RVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 412 Rls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
|++++ ..+++++++++++|++++++
T Consensus 413 Ri~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 413 RFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEECccCCCHHHHHHHHHHHHHHHHh
Confidence 99876 34899999999999998753
No 162
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.96 E-value=1.8e-27 Score=239.57 Aligned_cols=344 Identities=13% Similarity=0.103 Sum_probs=229.9
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC----cEE
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN----RIV 124 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~----~i~ 124 (442)
+.|+|..++|+.+. .+.+.+....... +..| +.....|+...+..++++.+.+++.+.+| ++++ +|+
T Consensus 45 ~~i~L~a~e~~~~~-~V~eA~~~~l~~~-~~~g---~p~~~~y~~~~~~~~le~~~~~~~a~~~g----~~~~~~~~~V~ 115 (483)
T 1rv3_A 45 VGLELIASENFASR-AVLEALGSCLNNK-YSLG---YPGQRYYGGTEHIDELETLCQKRALQAYG----LDPQCWGVNVQ 115 (483)
T ss_dssp SSEECCTTCCCCCH-HHHHHHTSGGGTC-CCCE---ETTEESSSCCHHHHHHHHHHHHHHHHHTT----CCTTTEEEECC
T ss_pred cCeEEEcCCCCCCH-HHHHHHHHHHhcc-Cccc---CCCccccCcchhHHHHHHHHHHHHHHHhC----CCcccCceEEE
Confidence 56899888887654 4444443322110 0000 01112344444567888888888888877 4443 488
Q ss_pred EecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh--------HhhhcC--cEEEEEecCCCCCCcCCHHHHHHHHHHH
Q 046900 125 VTAGATAANELLTFILADPGDALLVPTPYYPGFDRD--------LRWRTG--IKIVPIHCDSSNNFQITPQALEAAYKEA 194 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~~G--~~v~~v~~~~~~~~~~d~~~l~~~l~~~ 194 (442)
+++|+ +++..++.++++|||+|++++|.|.++... +.. .| +++++++++++ ++.+|+++|++.+++.
T Consensus 116 ~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~-~G~~~~~v~~~~~~~-~~~iD~d~le~~i~~~ 192 (483)
T 1rv3_A 116 PYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISA-TSIFFESMAYKVNPD-TGYIDYDRLEENARLF 192 (483)
T ss_dssp CSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSH-HHHHSEEEEECBCTT-TCSBCHHHHHHHHHHH
T ss_pred ECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCccc-ccceEEEEECccccC-CCcCCHHHHHHHHhhc
Confidence 88888 888888899999999999999998877532 232 44 56666665643 5789999999999832
Q ss_pred HhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc-CCCCCCCcccHHHHHhhhcCCCCCcEEEE
Q 046900 195 ESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG-SAFSSSEFVSIAEILEARQYKDSERVHIV 273 (442)
Q Consensus 195 ~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~-~~~~~~~~~s~~~~~~~~~~~~~~~vi~~ 273 (442)
++|+|++ +++||+ .+++ +++|.++|+++|+++|+|++|.. +.+.+....++ . ...+++
T Consensus 193 -----~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~----~-------~~div~ 251 (483)
T 1rv3_A 193 -----HPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF----E-------HCHVVT 251 (483)
T ss_dssp -----CCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG----G-------TCSEEE
T ss_pred -----CCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCC----C-------CCcEEE
Confidence 7888888 899988 7877 78888999999999999999862 22222111111 1 123678
Q ss_pred ecCcccCCCCCceeEEEeecCH--------------HHHHHHHHccc---cCCCcHHHHHHHHHHhcCchhHHHHHHHHH
Q 046900 274 YSLSKDLGLPGFRVGTIYSYND--------------KVVTTARRMSS---FTLISSQTQYLLASMLSNKKFTENYIKTNR 336 (442)
Q Consensus 274 ~S~SK~~g~~G~RiG~i~~~~~--------------~~~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 336 (442)
.|+||++ .|+|.||++++++ .+...+..... .++.+.....++...+... ....+++.+
T Consensus 252 ~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~--~~~~~~~~~ 327 (483)
T 1rv3_A 252 TTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA--MTPEFKEYQ 327 (483)
T ss_dssp EESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHH--TSHHHHHHH
T ss_pred ecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHH--hChhHHHHH
Confidence 9999987 6889999999664 23333332211 1223333344444444321 112356778
Q ss_pred HHHHHHHHHHHHHHHhCCCeeecCC-ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEe----CCCCCCCCCCCEE
Q 046900 337 ERLQKRYQMIIEGLRSAGIECLKGN-AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNIS----PGSSCHCSEPGWF 411 (442)
Q Consensus 337 ~~~~~~~~~l~~~L~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~----pg~~f~~~~~~~i 411 (442)
+++.++++++.+.|.+.|+++..+. .++++|++++.... +..++.+.| ++.||.+. ||..+. ..++++
T Consensus 328 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g~-----~~~~~~~~L-~~~gI~v~~~~~pg~~~~-~~~~~i 400 (483)
T 1rv3_A 328 RQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGT-----DGGRAEKVL-EACSIACNKNTCPGDKSA-LRPSGL 400 (483)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTC-----CHHHHHHHH-HHTTEECEEECCSSCSCT-TSCCEE
T ss_pred HHHHHHHHHHHHHHHhcCCEeccCCCCCceEEEeccCCCC-----CHHHHHHHH-HhCCcEEecCCCCCCCcC-CCCceE
Confidence 8899999999999998899887654 35678888864210 244555555 55699999 987432 235789
Q ss_pred EEEeecC-C----HHHHHHHHHHHHHHHHH
Q 046900 412 RVCFANM-S----EQTLEVALKRIHNFMQK 436 (442)
Q Consensus 412 Rls~~~~-~----~e~i~~~l~~l~~~l~~ 436 (442)
||+++.. + ++++++++++|.+++..
T Consensus 401 Ris~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 401 RLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp EEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred EeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 9999732 3 79999999999999876
No 163
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.96 E-value=7.7e-28 Score=239.02 Aligned_cols=342 Identities=13% Similarity=0.111 Sum_probs=217.2
Q ss_pred CCCCCceeeeeccc--cccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLAE--NQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+||++.+. |.++ ++.+.+.+.+..... ....|+ .....+|++++++++. .
T Consensus 49 d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~----------~~~~~~-~~~~~~l~~~la~~~~---------~ 108 (429)
T 3k28_A 49 DIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERG----------TSFGAP-TEIENKLAKLVIERVP---------S 108 (429)
T ss_dssp ETTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHC----------SCCSSC-CHHHHHHHHHHHHHST---------T
T ss_pred ECCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhC----------cCcCCC-CHHHHHHHHHHHHhCC---------C
Confidence 34466789998764 4443 355555554432110 012243 3455777777777642 4
Q ss_pred CCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCc------------CCHH
Q 046900 120 LNRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQ------------ITPQ 185 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~------------~d~~ 185 (442)
+++|++|+|+++++..+++.+.. +++.|++.+|+|.++...+....|..+..++.....++. -|++
T Consensus 109 ~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 188 (429)
T 3k28_A 109 IEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLE 188 (429)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHH
T ss_pred CCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHH
Confidence 78999999999999999987754 678999999999876544332233222222211111111 1789
Q ss_pred HHHHHHHHHHhcCCceeEEEEeCCC-CCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhc
Q 046900 186 ALEAAYKEAESKDMRVRGVLITNPS-NPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQ 263 (442)
Q Consensus 186 ~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~ 263 (442)
+|++.+++.. .+++ +++++|+ |++|.+. +.+.+++|.++|++||+++|+||+|.++ ..+.. ...+..
T Consensus 189 ~le~~l~~~~---~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~--~~~~~~---- 257 (429)
T 3k28_A 189 SVKYAFEQFG---DDIA-CVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYN--CGQGYY---- 257 (429)
T ss_dssp HHHHHHHHHG---GGEE-EEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTT--HHHHHH----
T ss_pred HHHHHHHhCC---CCEE-EEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc--hHHHHh----
Confidence 9999987532 2444 4555564 5566555 6778999999999999999999999987 54422 111121
Q ss_pred CCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-----ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 046900 264 YKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-----MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRER 338 (442)
Q Consensus 264 ~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 338 (442)
+...-+.||||++| .|+|+||+++ ++.+.+.+.. ....+..+++++.++.+.++..+ ++..+.
T Consensus 258 ----~~~~di~t~sK~~~-~G~~iG~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~------~~~~~~ 325 (429)
T 3k28_A 258 ----GVTPDLTCLGKVIG-GGLPVGAYGG-KAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT------PESYVE 325 (429)
T ss_dssp ----TCCCSEEEECGGGG-TTSCCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC------HHHHHH
T ss_pred ----CCCCceehhhhhhc-CCCCeEEEEE-cHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH------HHHHHH
Confidence 11112457999998 6999999999 5666665543 22235678899999888887543 234455
Q ss_pred HHHHHHHHHHHHHh----CCC-eeecCCceEEEEEecCCccc-------ccChhhHHHHHHHHHHcCcEEEeCCCCCCCC
Q 046900 339 LQKRYQMIIEGLRS----AGI-ECLKGNAGLFCWMNLSPLLE-------EQTREGELALWDSMLHEVKLNISPGSSCHCS 406 (442)
Q Consensus 339 ~~~~~~~l~~~L~~----~g~-~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~ 406 (442)
++++++++.+.|++ .+. ....+.+ .++++.+..... ........++++.|+++ ||.+.||.
T Consensus 326 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~----- 398 (429)
T 3k28_A 326 FERKAEMLEAGLRKAAEKHGIPHHINRAG-SMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQ-GVFLPPSQ----- 398 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEEET-TEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSST-----
T ss_pred HHHHHHHHHHHHHHHHhhCCCCEEEEeec-cEEEEEEecCCcccccccccccHHHHHHHHHHHHHC-CeEEecCC-----
Confidence 55566666666554 333 2333444 466676643110 01112346788888776 99999863
Q ss_pred CCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 407 EPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 407 ~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.+++|+++.. +++++++++++|+++++++
T Consensus 399 -~~~~r~~~~~-t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 399 -FEGLFLSTVH-SDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp -TSCBCCCTTC-CHHHHHHHHHHHHHHHHTC
T ss_pred -CCCEEEECCC-CHHHHHHHHHHHHHHHHHH
Confidence 3468888766 8999999999999998754
No 164
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.96 E-value=2.1e-27 Score=237.33 Aligned_cols=344 Identities=12% Similarity=0.097 Sum_probs=221.4
Q ss_pred CCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCC-cchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 46 NPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDY-HGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 46 ~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
....+||++.+. +.+ +++.+.+.+.+..... . |... .+..++++++++.+.+..+ .++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~------------~-~~~~~~~~~~~~~~l~~~la~~~~----~~~ 110 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTL------------D-YSPGFQYGHPLSFQLAEKITDLTP----GNL 110 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTC------------S-CCCSSSCCCHHHHHHHHHHHTTSS----TTE
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhC------------C-CccccccCCHHHHHHHHHHHHhCC----CCC
Confidence 345678887654 344 2355555555443210 0 1111 2334556666666665432 467
Q ss_pred CcEEEecChHHHHHHHHHhhcC--------CCCeEEEcCCCCcChHH-hHhhhcC--------------cEEEEEecCCC
Q 046900 121 NRIVVTAGATAANELLTFILAD--------PGDALLVPTPYYPGFDR-DLRWRTG--------------IKIVPIHCDSS 177 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~--------~gd~Vl~~~p~y~~~~~-~~~~~~G--------------~~v~~v~~~~~ 177 (442)
++|++|+|+++++..+++++.. ++|.|++.+|+|.++.. .+.. .| +..+++|....
T Consensus 111 ~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~-~g~~~~~~~~~~~~~~~~~v~~~~~~~ 189 (449)
T 3a8u_X 111 NHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSL-GGVNGNRKLFGQPMQDVDHLPHTLLAS 189 (449)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHH-CCCHHHHTTTCCCSCSEEEECCCCCGG
T ss_pred CEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhc-cCChhhccccCCCCCCCeEecCCcccc
Confidence 8999999999999999988764 67999999999988643 3332 33 33333332111
Q ss_pred CCC-cCC--------HHHHHHHHHHHHhcCCceeEEEEeCCC-CCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCC
Q 046900 178 NNF-QIT--------PQALEAAYKEAESKDMRVRGVLITNPS-NPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSA 246 (442)
Q Consensus 178 ~~~-~~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~ 246 (442)
.+| .+| ++.|++.+++.. ..+++ +++++|+ ||||. +.+.+.+++|.++|++||+++|+||+|.++.
T Consensus 190 ~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~-~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g 266 (449)
T 3a8u_X 190 NAYSRGMPKEGGIALADELLKLIELHD--ASNIA-AVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFG 266 (449)
T ss_dssp GTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEE-EEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred CccccCChHHHHHHHHHHHHHHHHhcC--CCCEE-EEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCcc
Confidence 111 246 899999987521 02454 5566775 77997 5678999999999999999999999998765
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHc-----------cccCCCcHHH
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRM-----------SSFTLISSQT 314 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~-----------~~~~~~s~~~ 314 (442)
+.+.. ..+..... ...+ .||||.++ +| +|+||++++ +.+.+.+... ...+..++++
T Consensus 267 ~~g~~-~~~~~~~~------~~di---~s~sK~l~-~G~~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~ 334 (449)
T 3a8u_X 267 RTGSM-FGADSFGV------TPDL---MCIAKQVT-NGAIPMGAVIAS-TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVA 334 (449)
T ss_dssp TTSSS-SHHHHHTC------CCSE---EEECGGGG-TTSSCCEEEEEE-HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHH
T ss_pred ccCcc-hhhhhcCC------CCCE---EEEccccc-CCCCceEEEEEC-HHHHHHhhccCcccccccccccCCCcccHHH
Confidence 54432 12221111 1222 28999998 68 999999994 5666666542 1224567788
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-Ceee--cCCceEEEEEecCCcccccChhhHHHHHHHHHH
Q 046900 315 QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECL--KGNAGLFCWMNLSPLLEEQTREGELALWDSMLH 391 (442)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 391 (442)
+.++.+.++.. ++ ....++++++++++.+.|++.+ +... .+..|+++|++++....... .+..++++.|++
T Consensus 335 ~aa~~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~-~~~~~~~~~l~~ 408 (449)
T 3a8u_X 335 CAAGLAALCLL---QK--ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAI-VRPFEAGMALWK 408 (449)
T ss_dssp HHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSS-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCccccc-ccHHHHHHHHHH
Confidence 88877777532 11 1345566777777778877642 3221 23345789999875321100 023468888887
Q ss_pred cCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 392 EVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 392 ~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
+ ||.+.|+ + +++||++. ..+++++++++++|++++++
T Consensus 409 ~-Gv~v~~~------g-~~iRis~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 409 A-GFYVRFG------G-DTLQFGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp H-TEECEEE------T-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred C-CcEEecC------C-CEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 7 9999986 1 68999965 34899999999999999865
No 165
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.96 E-value=8.8e-28 Score=238.47 Aligned_cols=340 Identities=13% Similarity=0.094 Sum_probs=214.2
Q ss_pred CCCCceeeeeccc--cccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 45 TNPSGVIQMGLAE--NQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 45 ~~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
.....+|||+.+. ++++ ++.+.+.+.+.... ...|.. ..+++.++++++.+.++ ++
T Consensus 49 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~------------~~~~~~---~~~~~~~la~~l~~~~~-----~~ 108 (427)
T 3fq8_A 49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEK------------GTSFGA---PCALENVLAEMVNDAVP-----SI 108 (427)
T ss_dssp TTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTT------------CSCCSS---CCHHHHHHHHHHHHHST-----TC
T ss_pred CCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHh------------CCCcCC---CCHHHHHHHHHHHHhCC-----CC
Confidence 4456789998775 4443 45555555543221 112322 34677777777776543 47
Q ss_pred CcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCcE-------------------EEEEecCCCCC
Q 046900 121 NRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGIK-------------------IVPIHCDSSNN 179 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~~-------------------v~~v~~~~~~~ 179 (442)
++|++|+|+++++..+++... ..++.|++.+|+|.++...+....|.. ++.++.+
T Consensus 109 ~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 184 (427)
T 3fq8_A 109 EMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN---- 184 (427)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT----
T ss_pred CEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC----
Confidence 899999999999999984331 245789999999987554332111211 2233321
Q ss_pred CcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC-HHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHH
Q 046900 180 FQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ-RSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEI 258 (442)
Q Consensus 180 ~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~-~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~ 258 (442)
|+++|++.+++. ..++++|+++.++|++|.+.+ .+.+++|.++|++||++||+||+|.++ ..+.. .. .+.
T Consensus 185 ---d~~~le~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~-~~~ 255 (427)
T 3fq8_A 185 ---DLEAVKALFAEN---PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG-GV-QEK 255 (427)
T ss_dssp ---CHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT-HH-HHH
T ss_pred ---CHHHHHHHHHhC---CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hh-hHh
Confidence 789999999762 225555555555677887665 555999999999999999999999987 44432 11 111
Q ss_pred HhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-----ccccCCCcHHHHHHHHHHhcCchhHHHHHH
Q 046900 259 LEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-----MSSFTLISSQTQYLLASMLSNKKFTENYIK 333 (442)
Q Consensus 259 ~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 333 (442)
. +...-+.||||+++ +|+|+||+++ ++.+.+.+.. ....+..+++++.++.+.++.... ++..+
T Consensus 256 ~--------~~~~di~t~sK~~~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-~~~~~ 324 (427)
T 3fq8_A 256 F--------GVTPDLTTLGKIIG-GGLPVGAYGG-KREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ-PGTYE 324 (427)
T ss_dssp T--------TCCCSEEEECGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTHHH
T ss_pred c--------CCCCChhhhhhhhh-CCcceEEEEE-cHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh-cCHHH
Confidence 1 11122468999998 8999999998 6677666553 222345678888888777752111 11222
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccc-------cChhhHHHHHHHHHHcCcEEEeCCCCCCCC
Q 046900 334 TNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEE-------QTREGELALWDSMLHEVKLNISPGSSCHCS 406 (442)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~ 406 (442)
+.++..+..++.+.+.+.+.++....+..|+++|++++..... .......++++.|+++ ||.+.|+..
T Consensus 325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gi~v~~~~~---- 399 (427)
T 3fq8_A 325 YLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQ-GIYLAPSQF---- 399 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSSTT----
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHC-CcEEecCCC----
Confidence 2333333333344444444454444455677889988652110 1112246788888777 999998653
Q ss_pred CCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 407 EPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 407 ~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
..+|+++.. +++++++++++|++++++
T Consensus 400 --~r~~~~~~~-t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 400 --EAGFTSLAH-TEEDIDATLAAARTVMSA 426 (427)
T ss_dssp --SCEECCTTC-CHHHHHHHHHHHHHHHHH
T ss_pred --CCEEeeCcC-CHHHHHHHHHHHHHHHHh
Confidence 246666655 899999999999998864
No 166
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.96 E-value=3.2e-27 Score=232.72 Aligned_cols=287 Identities=16% Similarity=0.175 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hcCcEEEEEecCC
Q 046900 100 FRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RTGIKIVPIHCDS 176 (442)
Q Consensus 100 lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~~v~~~~ 176 (442)
.++++++.+.+..| .+++++++|+++++..++.+++++||.|+++.|+|..+...+.. ..|++++.++.+
T Consensus 82 ~~~~l~~~la~~~g------~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~- 154 (414)
T 3ndn_A 82 TVSVFEERLRLIEG------APAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD- 154 (414)
T ss_dssp HHHHHHHHHHHHHT------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-
T ss_pred HHHHHHHHHHHHHC------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-
Confidence 44444444444333 46789999999999999999999999999999999987766531 389999999864
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 177 SNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 177 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
|++.|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+...+.. ++
T Consensus 155 ------d~~~l~~ai~~------~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~----~~- 214 (414)
T 3ndn_A 155 ------DLSQWERALSV------PTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQ----GF- 214 (414)
T ss_dssp ------CHHHHHHHTSS------CCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC----CG-
T ss_pred ------CHHHHHHhcCC------CCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-
Confidence 78999998864 7899999999999999987 7788999999999999999998432211 11
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcc-cc-CCCcHHHHHHHHHHhcCchhHHHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMS-SF-TLISSQTQYLLASMLSNKKFTENYIK 333 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~-~~-~~~s~~~q~~~~~~l~~~~~~~~~~~ 333 (442)
. .+..+++.|+||.+|.+| +++||++++++.+.+.++... .. ...++....++...++ . +.
T Consensus 215 ---~------~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~---~----l~ 278 (414)
T 3ndn_A 215 ---P------LGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE---T----LA 278 (414)
T ss_dssp ---G------GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG---G----HH
T ss_pred ---h------cCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH---H----HH
Confidence 1 134588999999999778 899999995544443444322 22 2335554444444333 2 33
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCee-ecC----------------CceEEEEEecCCcccccChhhHHHHHHHHHHcCcE
Q 046900 334 TNRERLQKRYQMIIEGLRSA-GIEC-LKG----------------NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKL 395 (442)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~~-g~~~-~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi 395 (442)
...++..++++.+.+.|++. ++.. ..| ..|.++|+.++.... ...+....+.+.+. ..++
T Consensus 279 ~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~-~~~~~~~~~~~~l~-~~~~ 356 (414)
T 3ndn_A 279 IRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPED-VAKQRAFEVLDKMR-LIDI 356 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGG-GHHHHHHHHHHHCS-SSEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcc-ccHHHHHHHHHhCc-cceE
Confidence 34455667778888888775 3332 212 146689999875200 00123556666663 4488
Q ss_pred EEeCCCCCCC---------------------CCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 396 NISPGSSCHC---------------------SEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 396 ~v~pg~~f~~---------------------~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
.+.+|..+.. ..++++|||++. |+.+.+++.|.+++
T Consensus 357 ~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~---e~~~dli~dl~~al 413 (414)
T 3ndn_A 357 SNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL---EDTDDLIADIDRAL 413 (414)
T ss_dssp CSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred cCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence 8888875532 235789999986 44566677776654
No 167
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.96 E-value=1.8e-27 Score=237.84 Aligned_cols=341 Identities=13% Similarity=0.066 Sum_probs=219.9
Q ss_pred CCC--ceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 46 NPS--GVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 46 ~~~--~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
... .+|||..+ .+.++ ++.+.+.+.+.... ...+....+..+...++++.+.+..+ ..
T Consensus 71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~------------~~~~~~~~~~~~~~~~L~e~la~~~~----~~ 134 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRV------------MNHVMFGGLTHEPAARLAKLLVDITP----AG 134 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHH------------CSCCCSSSEECHHHHHHHHHHHHHSS----TT
T ss_pred CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHh------------ccCccccccCCHHHHHHHHHHHHhCC----CC
Confidence 455 78898876 45553 45555554433211 00111011123444455555554432 45
Q ss_pred CCcEEEecChHHHHHHHHHhhcC-------CC-CeEEEcCCCCcChHHhHhhhc-C-------------cEEEEEecCCC
Q 046900 120 LNRIVVTAGATAANELLTFILAD-------PG-DALLVPTPYYPGFDRDLRWRT-G-------------IKIVPIHCDSS 177 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~~-G-------------~~v~~v~~~~~ 177 (442)
.++|++|+|+++++..+++++.. +| +.|++.+++|.++...+.. . + ..+..++....
T Consensus 135 ~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~ 213 (457)
T 3tfu_A 135 LDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMS-ICDPHGGMHSLWTDVLAAQVFAPQVPR 213 (457)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHT-TSCCC----------CCCCEEECCCCS
T ss_pred cCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhc-ccCCcccccccccCCCCCceEecCCCc
Confidence 67999999999999999988864 55 5899999999876544331 2 1 12223333222
Q ss_pred CCCcCCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccH
Q 046900 178 NNFQITPQALEAAYKEAESKDMRVRGVLITN-PSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSI 255 (442)
Q Consensus 178 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~-P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~ 255 (442)
.....|++.|++.+++.. .++++|++.. ++||+|.++ +.+.+++|.++|++||+++|+||+|.++...+..+ ..
T Consensus 214 ~~~~~d~~~le~~l~~~~---~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a~ 289 (457)
T 3tfu_A 214 DYDPAYSAAFEAQLAQHA---GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-AA 289 (457)
T ss_dssp SCCHHHHHHHHHHHHHHG---GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-TH
T ss_pred ccCHHHHHHHHHHHHhCC---CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-Hh
Confidence 111247899999987531 2677777776 789999876 77779999999999999999999999876655432 22
Q ss_pred HHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH-------ccccCCCcHHHHHHHHHHhcCchh
Q 046900 256 AEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR-------MSSFTLISSQTQYLLASMLSNKKF 327 (442)
Q Consensus 256 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~-------~~~~~~~s~~~q~~~~~~l~~~~~ 327 (442)
..... ...++ ||||+++ .| +|+||+++ ++.+.+.+.. ....+..+++++.++.+.|+...
T Consensus 290 ~~~~~------~pdii---t~sK~l~-gG~~~lG~v~~-~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~- 357 (457)
T 3tfu_A 290 DHAGV------SPDIM---CVGKALT-GGYLSLAATLC-TADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLL- 357 (457)
T ss_dssp HHHTC------CCSEE---EECGGGG-TTSSCCEEEEE-EHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHH-
T ss_pred HhcCC------CceEE---EEChhhh-CCCcceEEEEE-cHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHh-
Confidence 22211 12333 8999997 56 79999999 5677776641 12335678888888877775211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCC
Q 046900 328 TENYIKTNRERLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSC 403 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f 403 (442)
+ +...+.++++++++.+.|+++ ++....+. |+|++++++... +..++++.|+++ ||.+.|+
T Consensus 358 --~--~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~-G~~~~i~l~~~~------~~~~~~~~l~~~-Gv~v~~~--- 422 (457)
T 3tfu_A 358 --G--QDWRTRITELAAGLTAGLDTARALPAVTDVRVC-GAIGVIECDRPV------DLAVATPAALDR-GVWLRPF--- 422 (457)
T ss_dssp --T--SCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEEC-SSCEEEEESSCC------CHHHHHHHHHHT-TEECCCB---
T ss_pred --h--hHHHHHHHHHHHHHHHHHHHHhcCCCeeeeecC-CeEEEEEECCcc------cHHHHHHHHHHC-CeEEEec---
Confidence 0 123344555556666666553 33333344 457888886532 257888899887 9999873
Q ss_pred CCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 404 HCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 404 ~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
.+++||++. ..+++++++++++|++++++..
T Consensus 423 ----~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 423 ----RNLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp ----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 258999865 3389999999999999987643
No 168
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=7.9e-28 Score=237.92 Aligned_cols=343 Identities=13% Similarity=0.107 Sum_probs=211.5
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecC
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAG 128 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G 128 (442)
+.+.+..++|.. ++.+.+.+.+..... . + ........|+.......+++...+++.+.++ +++++|++++|
T Consensus 31 ~~~~~~~~~n~~-~~~v~~a~~~~~~~~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~~v~~~sG 101 (420)
T 3gbx_A 31 EHIELIASENYT-SPRVMQAQGSQLTNK-Y--A-EGYPGKRYYGGCEYVDVVEQLAIDRAKELFG----ADYANVQPHSG 101 (420)
T ss_dssp HSEECCTTCCCC-CHHHHHHHTSGGGGC-C--C---------------CHHHHHHHHHHHHHHHT----CSEEECCCSSH
T ss_pred cceeeeccCCCC-CHHHHHHHHHHHhcc-c--c-cCCCCccccCchHHHHHHHHHHHHHHHHHhC----CCCceeEecCc
Confidence 346676677764 445555554432110 0 0 0000111233323334445444456666554 56677777777
Q ss_pred hHHHHHHHHHhhcCCCCeEEEcCCCCcChH---HhHhh-hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEE
Q 046900 129 ATAANELLTFILADPGDALLVPTPYYPGFD---RDLRW-RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGV 204 (442)
Q Consensus 129 ~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~-~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 204 (442)
++++..++.+++++||.|+++.|+|..+. ..... ..+...++++.+ .++.+|++.|++++++. ++++|
T Consensus 102 -s~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~-----~~~~v 173 (420)
T 3gbx_A 102 -SQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEH-----KPKMI 173 (420)
T ss_dssp -HHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHH-----CCSEE
T ss_pred -HHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhc-----CCeEE
Confidence 78999999999999999999999998743 11111 134566666665 35679999999999863 57899
Q ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC
Q 046900 205 LITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG 284 (442)
Q Consensus 205 ~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 284 (442)
++++|+||+ ..+ +++|.++|++||+++|+||+|....+....+.... ....+++.|+||+++ |
T Consensus 174 ~~~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~----------~~~di~~~s~sK~~~--g 236 (420)
T 3gbx_A 174 IGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPV----------PHAHVVTTTTHKTLA--G 236 (420)
T ss_dssp EECCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCST----------TTSSEEEEESSGGGC--S
T ss_pred EEecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceecccCCccc----------ccCCEEEeecccCCC--C
Confidence 999999975 455 88999999999999999999863222111111110 123378999999984 5
Q ss_pred ceeEEEeecC--HHHHHHHHHcccc---CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 046900 285 FRVGTIYSYN--DKVVTTARRMSSF---TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK 359 (442)
Q Consensus 285 ~RiG~i~~~~--~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 359 (442)
.+.||+++++ +.+.+.+...... +..+...+.++...+.. ...+++++.++++.++++++.+.|.+.|+++..
T Consensus 237 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 314 (420)
T 3gbx_A 237 PRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKE--AMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVS 314 (420)
T ss_dssp CSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHH--TTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGG
T ss_pred CCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHH--HHhHhHHHHHHHHHHHHHHHHHHHHhcCCeecc
Confidence 5669999965 3666665543222 12223333333323321 112345778888999999999999988888865
Q ss_pred C-CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeC-------CCCCCCCCCCEEEEEeec-----CCHHHHHHH
Q 046900 360 G-NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISP-------GSSCHCSEPGWFRVCFAN-----MSEQTLEVA 426 (442)
Q Consensus 360 ~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~p-------g~~f~~~~~~~iRls~~~-----~~~e~i~~~ 426 (442)
+ ..++++|+.++.... +...+.+.| +++||.+.| |..|+ +..+||++.. +++++++++
T Consensus 315 ~~~~~~~~~~~~~~~~~-----~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~---~~~iRi~~~~~~~~~~~~~~i~~~ 385 (420)
T 3gbx_A 315 GGTENHLFLLDLVDKNL-----TGKEADAAL-GRANITVNKNSVPNDPKSPFV---TSGIRIGSPAVTRRGFKEAEVKEL 385 (420)
T ss_dssp GSCSSSEEEEECGGGTC-----CHHHHHHHH-HHTTEECEEECCTTCSSCTTT---CSEEEEECHHHHHTTCCHHHHHHH
T ss_pred CCCCCeEEEEEcCCCCC-----CHHHHHHHH-HHCCcEeccccCCCCccccCC---CcceEEecchhcccCCCHHHHHHH
Confidence 3 456688888754211 244555555 555999998 33332 3459999862 357899999
Q ss_pred HHHHHHHHHH
Q 046900 427 LKRIHNFMQK 436 (442)
Q Consensus 427 l~~l~~~l~~ 436 (442)
++.|++++++
T Consensus 386 ~~~l~~~l~~ 395 (420)
T 3gbx_A 386 AGWMCDVLDN 395 (420)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhC
Confidence 9999998765
No 169
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.96 E-value=1.2e-26 Score=227.20 Aligned_cols=285 Identities=21% Similarity=0.215 Sum_probs=200.6
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----Hhhhc
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWRT 165 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~~ 165 (442)
.|+. .+..+++++++++++ .+ +.|++++| ++++..++.+++++||.|+++.|+|...... ++ ..
T Consensus 48 ~~~~-~~~~~l~~~la~~~~--------~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~-~~ 115 (386)
T 1cs1_A 48 RRGN-PTRDVVQRALAELEG--------GA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAK-RG 115 (386)
T ss_dssp TTCC-HHHHHHHHHHHHHHT--------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHT-TT
T ss_pred CCCC-ccHHHHHHHHHHHhC--------CC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHH-hc
Confidence 4443 467899999999986 22 56777666 8999999999999999999999999875443 34 37
Q ss_pred CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 166 GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 166 G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
|++++.++.+ |++.+++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+
T Consensus 116 g~~~~~~~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~ 179 (386)
T 1cs1_A 116 CYRVLFVDQG-------DEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSP 179 (386)
T ss_dssp SCEEEEECTT-------CHHHHHHHHHT------CCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCT
T ss_pred CCEEEEeCCC-------CHHHHHHhhcc------CCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 9999988753 78999999874 7899999999999999997 788889999999999999999976
Q ss_pred CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHh
Q 046900 246 AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASML 322 (442)
Q Consensus 246 ~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l 322 (442)
.+.. +. . .+..+++.|+||.++.+|.|+ ||++++++.+.+.+...... +..+++.+.++...+
T Consensus 180 ~~~~----~~----~------~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l 245 (386)
T 1cs1_A 180 ALQN----PL----A------LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGL 245 (386)
T ss_dssp TTCC----GG----G------GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHH
T ss_pred ccCC----cc----c------cCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence 5431 11 1 145688999999998899997 99999665666665543332 345677777665555
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-Ceee-c-----------------CCceEEEEEecCCcccccChhhHH
Q 046900 323 SNKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECL-K-----------------GNAGLFCWMNLSPLLEEQTREGEL 383 (442)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~-~-----------------~~~g~~~~~~~~~~~~~~~~~~~~ 383 (442)
+. +....+.+.++++.+.+.|+++. +... . ..++ ++.+.++.. ..
T Consensus 246 ~~-------~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~ 309 (386)
T 1cs1_A 246 RT-------LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGA-MLSFELDGD--------EQ 309 (386)
T ss_dssp TT-------HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCS-EEEEEESSC--------HH
T ss_pred cH-------HHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCce-EEEEEECCC--------HH
Confidence 42 23344556667777777776642 2111 1 1244 555566531 23
Q ss_pred HHHHHHHHcCcEEEeCCCCCC-------------------------CCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 384 ALWDSMLHEVKLNISPGSSCH-------------------------CSEPGWFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 384 ~l~~~l~~~~gi~v~pg~~f~-------------------------~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.+...| ++.||.+++++ |+ +..++++||+++. ++.++.+++|.+++++.
T Consensus 310 ~~~~~l-~~~gi~~~~~~-~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 310 TLRRFL-GGLSLFTLAES-LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAA 383 (386)
T ss_dssp HHHHHH-HTCSSSEEBSC-CCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HhCCcceEccc-CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc---CCHHHHHHHHHHHHHHh
Confidence 444444 55699887432 11 1125799999985 34566666666666654
No 170
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.96 E-value=6.8e-28 Score=236.43 Aligned_cols=324 Identities=14% Similarity=0.190 Sum_probs=216.0
Q ss_pred CCCceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccC-CCcchHHHHHHHHHHHHHHhCCCCccCCCcEE
Q 046900 46 NPSGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQ-DYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV 124 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~ 124 (442)
+..++++++.+.+.++.... +.+.+... ...|+ +..+..++|+++|++++ .++++
T Consensus 20 ~~~~~~~l~~~~p~~~~~~~-~a~~~~~~-------------~~~~~~~~~~~~~l~~~la~~~~----------~~~~i 75 (391)
T 3dr4_A 20 HMSDLPRISVAAPRLDGNER-DYVLECMD-------------TTWISSVGRFIVEFEKAFADYCG----------VKHAI 75 (391)
T ss_dssp --------CCCCCCCCSSHH-HHHHHHHH-------------HTCCSSCSHHHHHHHHHHHHHHT----------CSEEE
T ss_pred hcCCCceeccCCCCCCHHHH-HHHHHHHH-------------cCCccCCChHHHHHHHHHHHHhC----------CCcEE
Confidence 34577888888877764332 22222210 12354 56788999999999986 23788
Q ss_pred EecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE
Q 046900 125 VTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG 203 (442)
Q Consensus 125 ~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 203 (442)
+++|+++++..++.++ +++||.|+++.|+|+.+...+.. .|++++.++++++ ++.+|++.|++.+++ ++++
T Consensus 76 ~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~-~g~~~~~~~~~~~-~~~~d~~~l~~~~~~------~~~~ 147 (391)
T 3dr4_A 76 ACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTY-CGATPVLVDNDPR-TFNLDAAKLEALITP------RTKA 147 (391)
T ss_dssp EESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHHHH-TTCEEEEECBCTT-TCSBCGGGSGGGCCT------TEEE
T ss_pred EeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHHHH-CCCEEEEEecCcc-ccCcCHHHHHHhcCC------CceE
Confidence 8999999999999999 89999999999999999998884 9999999998753 578999999988754 6776
Q ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC-CCCCCcccHHHHHhhhcCCCCCcEEEEecCc--ccC
Q 046900 204 VLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA-FSSSEFVSIAEILEARQYKDSERVHIVYSLS--KDL 280 (442)
Q Consensus 204 v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~-~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~S--K~~ 280 (442)
|+ |+||||.+.+ +++|+++|+++|+++|+|++|+... +.+..... + .+ +.+.||| |.+
T Consensus 148 v~---~~n~tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~---~--------~d--i~~~S~s~~K~l 208 (391)
T 3dr4_A 148 IM---PVHLYGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRGKKSGS---L--------GD--CATFSFFGNAII 208 (391)
T ss_dssp EC---CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS---S--------SS--EEEEECBTTSSS
T ss_pred EE---EECCCCChhh---HHHHHHHHHHcCCEEEEECcccccceECCeeecc---c--------CC--EEEEECCCCCcC
Confidence 66 6789999887 7778889999999999999998532 22211000 0 12 5667766 766
Q ss_pred CCCCceeEEEeecCHHHHHHHHHcccc----------------CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Q 046900 281 GLPGFRVGTIYSYNDKVVTTARRMSSF----------------TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQ 344 (442)
Q Consensus 281 g~~G~RiG~i~~~~~~~~~~~~~~~~~----------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (442)
+|.+.||++++++.+.+.++..... +.++.+...+....+ +.+++..++.++.++
T Consensus 209 --~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~-------~~~~~~~~~~~~~~~ 279 (391)
T 3dr4_A 209 --TTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQL-------ERVDEHLAARERVVG 279 (391)
T ss_dssp --CCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHH-------HTHHHHHHHHHHHHH
T ss_pred --CcCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHH-------HHHHHHHHHHHHHHH
Confidence 4467999999777777666543321 122222222222111 123445566666777
Q ss_pred HHHHHHHhCCCeeecC------Cce-EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCC---CC--------C
Q 046900 345 MIIEGLRSAGIECLKG------NAG-LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSC---HC--------S 406 (442)
Q Consensus 345 ~l~~~L~~~g~~~~~~------~~g-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f---~~--------~ 406 (442)
++.+.|.+.|+++..+ ..+ +.+++.++.... .+..++.+.|.++ ||.+.+|... .+ .
T Consensus 280 ~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l~~~L~~~-GI~v~~~~~p~~~~~~~~~~~~~~ 354 (391)
T 3dr4_A 280 WYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLS----TTRDQVIKDLDAL-GIESRPVFHPMHIMPPYAHLATDD 354 (391)
T ss_dssp HHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSCS----SCHHHHHHHHHHT-TCCCEECCCCGGGSGGGGGGCCTT
T ss_pred HHHHHhhcCCccccCcCCCCCCcceeEEEEEEECCccc----hhHHHHHHHHHHC-CCceeecCCccccChhhhhcCcCC
Confidence 8888888777776544 122 235666654100 1256788888776 9999987511 00 0
Q ss_pred -------CCCEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 407 -------EPGWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 407 -------~~~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
....+||++. .+++++++++++.|++++
T Consensus 355 ~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 355 LKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp CHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 1246899886 448999999999998754
No 171
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.96 E-value=5.4e-27 Score=230.68 Aligned_cols=192 Identities=21% Similarity=0.266 Sum_probs=147.9
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----Hhhhc
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWRT 165 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~~ 165 (442)
.|+. .+..+||+++|++++ . .+.|++++| ++++..++. ++++||+|+++.|+|...... ++ ..
T Consensus 63 r~~~-p~~~~l~~~la~~~g--------~-~~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~-~~ 129 (403)
T 3cog_A 63 RSGN-PTRNCLEKAVAALDG--------A-KYCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVAS-EF 129 (403)
T ss_dssp ---C-HHHHHHHHHHHHHHT--------C-SEEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGG-GG
T ss_pred CCCC-chHHHHHHHHHHHhC--------C-CcEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHH-Hc
Confidence 4543 467899999999985 2 256777666 589999998 889999999999999875443 34 38
Q ss_pred CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcC-cEEEEeccCCc
Q 046900 166 GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN-IHLVSDEIYSG 244 (442)
Q Consensus 166 G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~-~~vi~De~y~~ 244 (442)
|++++.++++ |++.+++.+++ ++++|++++|+||||.+++ +++|+++|+++| +++|+|++|+.
T Consensus 130 G~~v~~v~~~-------d~~~l~~~i~~------~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~ 193 (403)
T 3cog_A 130 GLKISFVDCS-------KIKLLEAAITP------ETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMS 193 (403)
T ss_dssp TCEEEEECTT-------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTC
T ss_pred CCEEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcc
Confidence 9999999864 78899988764 7899999999999999998 888899999999 99999999997
Q ss_pred CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHH
Q 046900 245 SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASM 321 (442)
Q Consensus 245 ~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~ 321 (442)
+.+.. +. . .+..++++|+||.++.+| +|+||++++++.+.+.++..... ...+++.+.++...
T Consensus 194 ~~~~~-~~-~------------~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~ 259 (403)
T 3cog_A 194 PYFQR-PL-A------------LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRG 259 (403)
T ss_dssp TTTCC-TT-T------------TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred cccCC-cc-c------------cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhh
Confidence 65421 11 1 145688999999998766 47999999666776666543332 33577888877777
Q ss_pred hcC
Q 046900 322 LSN 324 (442)
Q Consensus 322 l~~ 324 (442)
++.
T Consensus 260 l~~ 262 (403)
T 3cog_A 260 LKT 262 (403)
T ss_dssp HTT
T ss_pred hhH
Confidence 764
No 172
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.95 E-value=2.4e-27 Score=233.46 Aligned_cols=302 Identities=12% Similarity=0.101 Sum_probs=206.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH-h--HhhhcC--cEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR-D--LRWRTG--IKIVP 171 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~-~--~~~~~G--~~v~~ 171 (442)
..++++.+.+.+.+.+| .+++.|++++| ++++..++.+++++||.|+++.|+|+.+.. . +.. .| .+++.
T Consensus 67 ~~~l~~~~r~~la~~~g----~~~~~i~~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 140 (405)
T 2vi8_A 67 VDIVEELARERAKQLFG----AEHANVQPHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNF-SGVQYNFVA 140 (405)
T ss_dssp HHHHHHHHHHHHHHHHT----CSEEECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSH-HHHHSEEEE
T ss_pred HHHHHHHHHHHHHHHhC----CCceEEEecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhh-ccceeEEEe
Confidence 45566544444444444 34555556676 999999999999999999999999988753 1 122 34 48888
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
+++++ .++.+|++.|++.+++. +++++++ +|+|+ |...+ +++|.++|++||+++|+||+|+........
T Consensus 141 ~~~~~-~~~~~d~~~l~~~i~~~-----~~~~v~~-~~~~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~ 209 (405)
T 2vi8_A 141 YGVDP-ETHVIDYDDVREKARLH-----RPKLIVA-AAAAY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGL 209 (405)
T ss_dssp ECBCT-TTCSBCHHHHHHHHHHH-----CCSEEEE-CCSSC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTS
T ss_pred ccccc-ccCCcCHHHHHHHHHhc-----CCeEEEE-eCCCC-CccCC---HHHHHHHHHHcCCEEEEEccccccccccCc
Confidence 88753 35779999999999752 5677665 55554 34444 789999999999999999999842221111
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCC-CCCceeEEEeecCHHHHHHHHHcccc---CCCcHHHHHHHHHHhcCchh
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMSSF---TLISSQTQYLLASMLSNKKF 327 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~ 327 (442)
... .+ . ...++++|+||.++ .+| ||++++ +.+.+.++..... +..+.....++.+.++..
T Consensus 210 ~~~--~~-~-------~~di~~~s~sK~~~g~~g---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~-- 273 (405)
T 2vi8_A 210 HPN--PV-P-------YAHFVTTTTHKTLRGPRG---GMILCQ-EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEA-- 273 (405)
T ss_dssp SCC--ST-T-------TCSEEEEESSSTTCCCSC---EEEEEC-HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--
T ss_pred CCC--cc-c-------cCCEEEEeccccCCCCCC---eEEEEc-HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHH--
Confidence 111 01 1 11277899999996 555 999994 6666666554322 222333333334445421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCC----
Q 046900 328 TENYIKTNRERLQKRYQMIIEGLRSAGIECLKG-NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSS---- 402 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~---- 402 (442)
...++++.++.++++++++.+.|++.|+++..+ .+++++|+.++.... +..++.+.|.++ ||.+.||..
T Consensus 274 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~-gi~v~~g~~~~~~ 347 (405)
T 2vi8_A 274 LQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQL-----TGKTAEKVLDEV-GITVNKNTIPYDP 347 (405)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTC-----CHHHHHHHHHHH-TEECEEECCTTCS
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEccCCCC-----CHHHHHHHHHHc-CceeccCcCcccc
Confidence 123567788899999999999999889888765 467899999864210 255677777565 999999863
Q ss_pred CCCCCCCEEEEEeec-----CCHHHHHHHHHHHHHHHHHH
Q 046900 403 CHCSEPGWFRVCFAN-----MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 403 f~~~~~~~iRls~~~-----~~~e~i~~~l~~l~~~l~~~ 437 (442)
++...++++|++++. ++++++++++++|++++++.
T Consensus 348 ~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 348 ESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp SCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence 332335789999983 57999999999999988653
No 173
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.95 E-value=2e-26 Score=225.97 Aligned_cols=282 Identities=15% Similarity=0.165 Sum_probs=203.2
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH----hhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL----RWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~~G~~v~~ 171 (442)
...+|++++|++++ .+++++++|+++++..++.+++++||+|+++.|+|+.+...+ . ..|++++.
T Consensus 67 ~~~~l~~~la~~~g----------~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~-~~g~~~~~ 135 (392)
T 3qhx_A 67 TRTALEAALAAVED----------AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFT-GWNVEYTP 135 (392)
T ss_dssp HHHHHHHHHHHHTT----------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGG-GGTCEEEE
T ss_pred HHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHH-hcCcEEEE
Confidence 45778888888764 347899999999999999999999999999999998776655 4 37999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++.+ |++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.... ..+
T Consensus 136 v~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~-~~~ 198 (392)
T 3qhx_A 136 VALA-------DLDAVRAAIRP------TTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPAL-QQP 198 (392)
T ss_dssp ECTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT-CCG
T ss_pred eCCC-------CHHHHHHhhCC------CCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCccccc-CCh
Confidence 9864 78999998864 8899999999999999988 88899999999999999999986432 111
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHccc--cCCCcHHHHHHHHHHhcCchhH
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSS--FTLISSQTQYLLASMLSNKKFT 328 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~ 328 (442)
. .+ +..+++.|+||.+|.+| +|+||++++++.+.+.+..... ....++..+.++...++..
T Consensus 199 ---~-~~---------~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l--- 262 (392)
T 3qhx_A 199 ---L-SL---------GADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKTL--- 262 (392)
T ss_dssp ---G-GG---------TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH---
T ss_pred ---H-Hh---------CCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHH---
Confidence 1 11 34588999999999777 8999999976677666654333 2445677777777766642
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCeee-cC----------------CceEEEEEecCCcccccChhhHHHHHHHHH
Q 046900 329 ENYIKTNRERLQKRYQMIIEGLRSA-GIECL-KG----------------NAGLFCWMNLSPLLEEQTREGELALWDSML 390 (442)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~----------------~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~ 390 (442)
....++..++.+.+.+.|++. ++... .| ..|.++++.++... .....+...+
T Consensus 263 ----~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~-----~~~~~~~~~l- 332 (392)
T 3qhx_A 263 ----VLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR-----TAAEQLCAKT- 332 (392)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH-----HHHHHHHHHC-
T ss_pred ----HHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH-----HHHHHHHHhC-
Confidence 223445566667777788765 33222 11 12557888887521 1345566555
Q ss_pred HcCcEEEeCCCCCCC------------------CCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 391 HEVKLNISPGSSCHC------------------SEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 391 ~~~gi~v~pg~~f~~------------------~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
+..|+.+..|+.+.. ..++.||||++. ++.++.++.|.+++
T Consensus 333 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~---e~~~~~i~~l~~al 391 (392)
T 3qhx_A 333 NIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI---EDVADLLDDLKQAL 391 (392)
T ss_dssp SSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred CCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEecc---CCHHHHHHHHHHHh
Confidence 444888887776421 125789999985 34556666666554
No 174
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.95 E-value=8.4e-28 Score=241.28 Aligned_cols=292 Identities=11% Similarity=0.058 Sum_probs=206.2
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCe---EEEcCCCCcChHH----hHhhhcCcEEE
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDA---LLVPTPYYPGFDR----DLRWRTGIKIV 170 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~---Vl~~~p~y~~~~~----~~~~~~G~~v~ 170 (442)
..+++.++++++ +++++|++|+|+++++.+++.+++++||. |+++.|+|+.... .++ ..|+++.
T Consensus 114 ~~l~~~la~~~g--------~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~-~~G~~~~ 184 (465)
T 3e9k_A 114 ESIVGLMKDIVG--------ANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQ-LHGLNIE 184 (465)
T ss_dssp HHHHGGGHHHHT--------CCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHH-HTTCCHH
T ss_pred HHHHHHHHHHcC--------CCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHH-HcCCcce
Confidence 567777777754 56889999999999999999999877655 9999999987433 555 3787752
Q ss_pred -----EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 171 -----PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 171 -----~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
.+|.+ +++.+|+++|+++++++ +.++++|++++|+||||.+++ +++|.++|+++|++||+|++|+..
T Consensus 185 ~~~v~~~~~~--~~~~~d~~~l~~~i~~~---~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g 256 (465)
T 3e9k_A 185 ESMRMIKPRE--GEETLRIEDILEVIEKE---GDSIAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVG 256 (465)
T ss_dssp HHEEEECCCT--TCSSCCHHHHHHHHHHH---GGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTT
T ss_pred eeeEEEecCC--CCCccCHHHHHHHHHhc---CCCeEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcC
Confidence 22333 45778999999999753 137899999999999999998 678888999999999999999842
Q ss_pred CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccc-------------------
Q 046900 246 AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS------------------- 306 (442)
Q Consensus 246 ~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~------------------- 306 (442)
.....+... +..++++|++|.++....++|+++++ +.+.+.+.....
T Consensus 257 ----~~~~~~~~~---------~~D~~~~s~~K~l~~gp~~~g~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 322 (465)
T 3e9k_A 257 ----NVELYLHDW---------GVDFACWCSYKYLNAGAGGIAGAFIH-EKHAHTIKPALVGWFGHELSTRFKMDNKLQL 322 (465)
T ss_dssp ----TSCCCHHHH---------TCCEEEECSSSTTCCCTTCCCEEEEC-GGGTTTSCCSSCCGGGBCHHHHTTCCSCCCB
T ss_pred ----CcCCchhhc---------CCCEEEECcccccccCCCceEEEEEc-HHHHhhcCCcccCccCCCCCcccccCCCcCc
Confidence 223344333 33478899999993122378999984 443322211000
Q ss_pred --------cCCCcHHHHHHHHHHhcCchhHHH-HHHHHHHHHHHHHHHHHHHHHh-----------CCCeeecCC----c
Q 046900 307 --------FTLISSQTQYLLASMLSNKKFTEN-YIKTNRERLQKRYQMIIEGLRS-----------AGIECLKGN----A 362 (442)
Q Consensus 307 --------~~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~-----------~g~~~~~~~----~ 362 (442)
.+..+.+...++.+.++ ++.+ .++++++++.++++++.+.|++ .|+++..|. .
T Consensus 323 ~~~~~~~~~gt~~~~~~~a~~aal~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~ 399 (465)
T 3e9k_A 323 IPGVCGFRISNPPILLVCSLHASLE---IFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEER 399 (465)
T ss_dssp CSSGGGGCCSCCCHHHHHHHHHHHH---HHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGB
T ss_pred CCChHHhccCCccHHHHHHHHHHHH---HHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhc
Confidence 01233344444444443 2222 2677888899999999999987 578877664 3
Q ss_pred eEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEe--ecCCHHHHHHHHHHHHHHHHHHH
Q 046900 363 GLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCF--ANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 363 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
|.++|+.++. +..++.+.|.++ ||.+.. ..++++|+++ ...++++++++++.|++++++..
T Consensus 400 g~~~~~~~~~--------~~~~l~~~L~~~-Gi~v~~------~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~ 462 (465)
T 3e9k_A 400 GCQLTITFSV--------PNKDVFQELEKR-GVVCDK------RNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAE 462 (465)
T ss_dssp CSCEEEEECC--------TTCCHHHHHHTT-TEECEE------ETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC--
T ss_pred ccEEEEEecC--------CHHHHHHHHHHC-CEEEec------CCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhcc
Confidence 5678888762 134677777666 999873 2357999998 23389999999999999987543
No 175
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.95 E-value=1.7e-27 Score=231.96 Aligned_cols=322 Identities=13% Similarity=0.160 Sum_probs=221.2
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecC
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAG 128 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G 128 (442)
++++|+.+.+.++. +.+.+.+... ...|.+..+..++|++++++++ .+++++++|
T Consensus 7 ~~~~l~~~~~~~~~--~~~~~~~~~~-------------~~~~~~~~~~~~l~~~la~~~~----------~~~~~~~~~ 61 (374)
T 3uwc_A 7 PYSYLERQFADIEP--YLNDLREFIK-------------TADFTLGAELEKFEKRFAALHN----------APHAIGVGT 61 (374)
T ss_dssp CSCCHHHHTSSCHH--HHHHHHHHHH-------------HTCCSSCHHHHHHHHHHHHHTT----------CSEEEEESC
T ss_pred eeeccccCCCCchH--HHHHHHHHHH-------------cCCcccChhHHHHHHHHHHHhC----------CCcEEEeCC
Confidence 46788888777654 4444443321 1246566788999999999975 337899999
Q ss_pred hHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe
Q 046900 129 ATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT 207 (442)
Q Consensus 129 ~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~ 207 (442)
+++++..++.++ +++||.|+++.|+|+.+...++. .|++++.++++ .++.+|++.+++.+++ ++++|+
T Consensus 62 gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~-~g~~~~~~~~~--~~~~~d~~~l~~~~~~------~~~~v~-- 130 (374)
T 3uwc_A 62 GTDALAMSFKMLNIGAGDEVITCANTFIASVGAIVQ-AGATPVLVDSE--NGYVIDPEKIEAAITD------KTKAIM-- 130 (374)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHH-TTCEEEEECBC--TTSSBCGGGTGGGCCT------TEEEEC--
T ss_pred HHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHH-cCCEEEEEecC--CCCCcCHHHHHHhCCC------CceEEE--
Confidence 999999999999 99999999999999999998884 99999999987 3577899999988764 677666
Q ss_pred CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC-CCCCCcccHHHHHhhhcCCCCCcEEEEecCc--ccCCCCC
Q 046900 208 NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA-FSSSEFVSIAEILEARQYKDSERVHIVYSLS--KDLGLPG 284 (442)
Q Consensus 208 ~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~-~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~S--K~~g~~G 284 (442)
|+||||.+.+ +++|.++|+++|+++|+||+|+.+. +++..... -..+++.|+| |.++.+|
T Consensus 131 -~~n~~G~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~-------------~~d~~~~s~~~~K~l~~~g 193 (374)
T 3uwc_A 131 -PVHYTGNIAD---MPALAKIAKKHNLHIVEDACQTILGRINDKFVGS-------------WGQFACFSLHPLKNLNVWS 193 (374)
T ss_dssp -CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS-------------SSSEEEEECSSSSSSCCSS
T ss_pred -EeCCcCCcCC---HHHHHHHHHHcCCEEEEeCCCccCceeCCeeccc-------------cccEEEEeCCCCCcCCccc
Confidence 9999999987 7788889999999999999998643 22211100 1136677866 9997447
Q ss_pred ceeEEEeecCHHHHHHHHHcccc--------------CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 046900 285 FRVGTIYSYNDKVVTTARRMSSF--------------TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGL 350 (442)
Q Consensus 285 ~RiG~i~~~~~~~~~~~~~~~~~--------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 350 (442)
. .|+++++++.+.+.++..... +.++.+...+....+. . +++..++.++..+++.+.|
T Consensus 194 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~---~----~~~~~~~~~~~~~~l~~~l 265 (374)
T 3uwc_A 194 D-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMN---Q----LETITEKRRGIAHLYDQSF 265 (374)
T ss_dssp C-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGG---G----HHHHHHHHHHHHHHHHHHT
T ss_pred e-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHH---H----HHHHHHHHHHHHHHHHHHh
Confidence 5 899998777776666543321 1123333332222221 1 3445555666777888888
Q ss_pred HhCC--Ceeec-CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC--------------C-------
Q 046900 351 RSAG--IECLK-GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC--------------S------- 406 (442)
Q Consensus 351 ~~~g--~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~--------------~------- 406 (442)
.+.+ +++.. +.++...|..++-... +..++.+.|.++ ||.+.++..... .
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L~~~-gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (374)
T 3uwc_A 266 VDLSEFIDVPVRREGVYHVFHIYVLRVK-----YRDQLFQYLKDN-GIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKH 339 (374)
T ss_dssp GGGTTTEECCCCCTTEECCCSSEEEEET-----THHHHHHHHHHT-TBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHH
T ss_pred ccCCCeEEeccCCCCCceeeEEEEEEcC-----CHHHHHHHHHHC-CCccccCCCCccccChhhhhcCCccCCCccHHHH
Confidence 7764 55432 2322222221111000 256788888766 999998751100 0
Q ss_pred CCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 407 EPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 407 ~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
..+.+||++. ..++++++++++.|++++++.
T Consensus 340 ~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 340 GEAVITLPAHPYLTEEEINYIIKKVREFYLEK 371 (374)
T ss_dssp HHHEEEECCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred HhCEEEccCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 0157999886 348999999999999998753
No 176
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.95 E-value=7.7e-27 Score=229.50 Aligned_cols=284 Identities=12% Similarity=0.081 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHHhCCCCccC-CCcEEE-ecChHHHHHHHHHhhcCCCCeEEEcCCCCcC-hHHhHhhhc--CcEEEEEe
Q 046900 99 SFRQAMASFMEQIRGGRAKFD-LNRIVV-TAGATAANELLTFILADPGDALLVPTPYYPG-FDRDLRWRT--GIKIVPIH 173 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~-~~~i~~-t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~~~--G~~v~~v~ 173 (442)
++.+++.+.+.+.+| ++ +++|++ |+|+++++.+++.+++++| .+.+..+.|.. ....+. .. |++++.++
T Consensus 78 ~~~~~~~~~la~~~g----~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~-~~~~g~~~~~v~ 151 (398)
T 2fyf_A 78 NLVGRVRSGLAELFS----LPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVS-KNPFVGEPIIIT 151 (398)
T ss_dssp HHHHHHHHHHHHHTT----CCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHH-HCTTSCCCEEEE
T ss_pred HHHHHHHHHHHHHhC----CCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHH-HhCCCCceEEEe
Confidence 334444444444444 34 468998 9999999999999999887 22333333321 112233 24 88888888
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
++. ++..+.+ + ..++++|++++|+||||.+++.+++.++ +|+++|+|++|+.+.. + .
T Consensus 152 ~~~--g~~~~~~-----i------~~~~~~v~~~~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~~~---~-~ 208 (398)
T 2fyf_A 152 SDP--GSAPEPQ-----T------DPSVDVIAWAHNETSTGVAVAVRRPEGS------DDALVVIDATSGAGGL---P-V 208 (398)
T ss_dssp CCT--TCCCCCC-----C------CTTCSEEEEESEETTTTEECCCCCCTTC------C-CEEEEECTTTTTTS---C-C
T ss_pred cCC--CCCCCcc-----c------cCCCCEEEEeCcCCCcceecchHHhhhh------cCCeEEEEeccccCCc---c-c
Confidence 762 3444421 2 2378999999999999999997766654 7999999999986432 1 1
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc-----------------------cccCCC
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM-----------------------SSFTLI 310 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~-----------------------~~~~~~ 310 (442)
.+ . +..+++.|+||.+|.+| ++||++++ +.+.+.+++. ..++..
T Consensus 209 ~~----~-------~~di~~~s~sK~~~~~g-g~g~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 275 (398)
T 2fyf_A 209 DI----A-------ETDAYYFAPQKNFASDG-GLWLAIMS-PAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTP 275 (398)
T ss_dssp CG----G-------GCSEEEECTTSTTCSCS-SEEEEEEC-HHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCC
T ss_pred Cc----c-------cCcEEEEecCcccCCCC-ceEEEEEC-HHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCC
Confidence 11 1 12367899999999775 69999994 5555444221 122445
Q ss_pred cHHHHHHHHHHhcCchhHHHH--HHHHHHHHHHHHHHHHHHHHhC-CCeeec--C--CceEEEEEecCCcccccChhhHH
Q 046900 311 SSQTQYLLASMLSNKKFTENY--IKTNRERLQKRYQMIIEGLRSA-GIECLK--G--NAGLFCWMNLSPLLEEQTREGEL 383 (442)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~ 383 (442)
+...+.++.++++. +.+. +++.+++++++++++.+.|++. |+++.. + .+++++|++++... +..
T Consensus 276 ~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 346 (398)
T 2fyf_A 276 AIATLALLAEQIDW---LVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDV------DAG 346 (398)
T ss_dssp CHHHHHHHHHHHHH---HHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTS------CHH
T ss_pred CHHHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCC------CHH
Confidence 55666666666652 2222 6778889999999999999988 888763 4 35668999986532 267
Q ss_pred HHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 384 ALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 384 ~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
++++.|.++ ||.+++|. ...+.+++||+++ ..+++++++++++|++++++
T Consensus 347 ~l~~~L~~~-gI~v~~g~--~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 347 TVAKILRAN-GIVDTEPY--RKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp HHHHHHHHT-TCBCCSCC--TTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHC-CcEEecCc--ccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 888888877 99999873 2223579999998 23799999999999998754
No 177
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.95 E-value=6.4e-27 Score=235.06 Aligned_cols=352 Identities=12% Similarity=0.061 Sum_probs=229.5
Q ss_pred CCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+|||+.+ .+.++ ++.+.+.+.+.... ...|....+..+++.++++++.+..+ .+
T Consensus 50 d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~------------~~~~~~~~~~~~~~~~la~~l~~~~~----~~ 113 (476)
T 3i5t_A 50 TEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMV------------LPYASPWYMATSPAARLAEKIATLTP----GD 113 (476)
T ss_dssp ETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHH------------CCCCCTTTCBCHHHHHHHHHHHTTSS----TT
T ss_pred ECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHh------------ccCcccCccCCHHHHHHHHHHHhcCC----CC
Confidence 3445678999876 45553 35555555443211 11111113557888899999987643 45
Q ss_pred CCcEEEecChHHHHHHHHHhhcC--------CCCeEEEcCCCCcChHHhHhhhcC--------------cEEEEEecCCC
Q 046900 120 LNRIVVTAGATAANELLTFILAD--------PGDALLVPTPYYPGFDRDLRWRTG--------------IKIVPIHCDSS 177 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~~G--------------~~v~~v~~~~~ 177 (442)
.++|++++|+++++..+++++.. .++.|++.+|+|.++...+....| ...++.|....
T Consensus 114 ~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 193 (476)
T 3i5t_A 114 LNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRH 193 (476)
T ss_dssp CCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGG
T ss_pred cCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccc
Confidence 67999999999999999988853 367999999999987655432112 22222222111
Q ss_pred CCCcCC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCc-CCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 178 NNFQIT--------PQALEAAYKEAESKDMRVRGVLITNPSNPLGA-TIQRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 178 ~~~~~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
+ +..| +++|++.+++.. ..++++|+++.++|++|. +.+.+.+++|.++|++||+++|+||+|.++...
T Consensus 194 ~-~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~ 270 (476)
T 3i5t_A 194 A-GNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRC 270 (476)
T ss_dssp C-TTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT
T ss_pred c-CCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccc
Confidence 1 1223 778888887421 125666666666788885 788899999999999999999999999987666
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHc---------cccCCCcHHHHHHH
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRM---------SSFTLISSQTQYLL 318 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~---------~~~~~~s~~~q~~~ 318 (442)
+..+ ....... ....+ .+|||+++ .| +|+|++++ ++.+.+.+... ...+..+++++.++
T Consensus 271 G~~~-~~~~~~~-----v~pdi---~t~sK~l~-~G~~plg~v~~-~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa 339 (476)
T 3i5t_A 271 GEWF-ASEKVFG-----VVPDI---ITFAKGVT-SGYVPLGGLAI-SEAVLARISGENAKGSWFTNGYTYSNQPVACAAA 339 (476)
T ss_dssp SSSC-HHHHTTC-----CCCSE---EEECGGGG-TTSSCCEEEEE-CHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHH
T ss_pred cCce-eeecccC-----CCcch---hhhhhhhc-CCCcCeEEEEE-CHHHHHHHhcCCcccccccccCCCCcCHHHHHHH
Confidence 6422 2220111 11222 36899998 69 99999999 67777766542 13356788899888
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCceEEEEEecCCccccc-Ch----hhHHHHHHHH
Q 046900 319 ASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQ-TR----EGELALWDSM 389 (442)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~-~~----~~~~~l~~~l 389 (442)
.+.|+..+ + +...+.++++.+++.+.|+++ .+....+.| .|+++++....... .+ .....+++.|
T Consensus 340 ~aaL~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 413 (476)
T 3i5t_A 340 LANIELME---R--EGIVDQAREMADYFAAALASLRDLPGVAETRSVG-LVGCVQCLLDPTRADGTAEDKAFTLKIDERC 413 (476)
T ss_dssp HHHHHHHH---H--TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEET-TEEEEEECCC-----CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---h--HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC-ceeEEEEecCccccccccchhHHHHHHHHHH
Confidence 88876321 1 234455566666666666653 233344444 47777776421100 00 0255778888
Q ss_pred HHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 390 LHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 390 ~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
+++ ||.+.|. + +++||+.. ..+++++++++++|++++++..+
T Consensus 414 ~~~-Gv~v~~~------g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~ 456 (476)
T 3i5t_A 414 FEL-GLIVRPL------G-DLCVISPPLIISRAQIDEMVAIMRQAITEVSA 456 (476)
T ss_dssp HHT-TEECEEE------T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHC-CCEEEec------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 777 9999983 1 68999954 33899999999999999987654
No 178
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.95 E-value=1.2e-26 Score=230.88 Aligned_cols=336 Identities=15% Similarity=0.102 Sum_probs=214.3
Q ss_pred CCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 45 TNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 45 ~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
..+..+|||+.+. +.+ +++.+.+.+.+..... ....| ..++++++++.+.+..+ .+
T Consensus 53 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~----------~~~~~-----~~~~~~~l~~~la~~~~-----~~ 112 (434)
T 2epj_A 53 VDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARG----------WLYGA-----PGEAEVLLAEKILGYVK-----RG 112 (434)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTC----------SCCSS-----CCHHHHHHHHHHHHHHC-----TT
T ss_pred CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhC----------CCCCC-----CCHHHHHHHHHHHHhCC-----CC
Confidence 3456789998775 343 3455555555432110 01122 23455555555555432 36
Q ss_pred CcEEEecChHHHHHHHHHh---hcCCCCeEEEcCCCCcChHHhHhh-------------hcCc------EEEEEecCCCC
Q 046900 121 NRIVVTAGATAANELLTFI---LADPGDALLVPTPYYPGFDRDLRW-------------RTGI------KIVPIHCDSSN 178 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~---l~~~gd~Vl~~~p~y~~~~~~~~~-------------~~G~------~v~~v~~~~~~ 178 (442)
++|++|+|+++++..++++ +. +++.|++.+|+|.++...+.. ..|+ +++.++.
T Consensus 113 ~~v~~~~sgseA~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~---- 187 (434)
T 2epj_A 113 GMIRFVNSGTEATMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY---- 187 (434)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET----
T ss_pred CEEEEeCCHHHHHHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC----
Confidence 8999999999999999887 54 467888889999875443210 0232 3455543
Q ss_pred CCcCCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 179 NFQITPQALEAAYKEAESKDMRVRGVLITNP-SNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 179 ~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
.|++.|++.+++.. .+++ +++++| +||||.++ +.+.+++|.++|++||+++|+||+|.++ ..+.. . ..
T Consensus 188 ---~d~~~le~~l~~~~---~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~-~~ 257 (434)
T 2epj_A 188 ---NDVEALERVFAEYG---DRIA-GVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE-G-AQ 257 (434)
T ss_dssp ---TCHHHHHHHHHHHG---GGEE-EEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT-H-HH
T ss_pred ---CCHHHHHHHHHhCC---CCEE-EEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc-h-hh
Confidence 27899999997531 2455 456666 46799866 6999999999999999999999999976 33321 1 11
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc-----cccCCCcHHHHHHHHHHhcCchhHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM-----SSFTLISSQTQYLLASMLSNKKFTENY 331 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~~~~~ 331 (442)
+... .... +.||||.+| .|+|+||+++ ++.+.+.+... ...+..+++++.++.+.++... +
T Consensus 258 ~~~~-----~~~d---i~s~sK~l~-~G~~~G~v~~-~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~---~- 323 (434)
T 2epj_A 258 GYFN-----IEGD---IIVLGKIIG-GGFPVGAVAG-SREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALE---E- 323 (434)
T ss_dssp HHHT-----CCCS---EEEEEGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHH---H-
T ss_pred HHhC-----CCCC---eeeecchhc-CCcceeeeee-cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHH---h-
Confidence 1111 0122 359999998 5999999999 46666554431 1224567888888777765221 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCeeecCCceEEEEEecCCcc-cc------cChhhHHHHHHHHHHcCcEEEeCC
Q 046900 332 IKTNRERLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSPLL-EE------QTREGELALWDSMLHEVKLNISPG 400 (442)
Q Consensus 332 ~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~-~~------~~~~~~~~l~~~l~~~~gi~v~pg 400 (442)
....++++++++++.+.|++. ++....+..|.++|++++... .. .......++++.|+++ ||.+.||
T Consensus 324 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~ 401 (434)
T 2epj_A 324 -EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRR-GVFIAPS 401 (434)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHT-TEECCSS
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHC-CeEEecc
Confidence 223455555666666666543 554322334568899886510 00 0112356788888776 9999997
Q ss_pred CCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 401 SSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 401 ~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
.. .++|+++.. +++++++++++|++++++..
T Consensus 402 ~~------~~~~~~~~~-t~e~i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 402 NL------EAVFTGLPH-QGEALEIAVEGLRSSLKTVL 432 (434)
T ss_dssp TT------SCEECCTTC-SHHHHHHHHHHHHHHHHHHH
T ss_pred CC------CcEEEeccC-CHHHHHHHHHHHHHHHHHHh
Confidence 42 247877655 89999999999999988753
No 179
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.95 E-value=2.7e-26 Score=229.02 Aligned_cols=339 Identities=14% Similarity=0.103 Sum_probs=215.9
Q ss_pred ceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCC---CcchHHHH--HHHH-HHHHHHhCCCCccCCCc
Q 046900 49 GVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQD---YHGLKSFR--QAMA-SFMEQIRGGRAKFDLNR 122 (442)
Q Consensus 49 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr--~~ia-~~l~~~~~~~~~~~~~~ 122 (442)
+.|+|..++|+.++. +.+.+.+..... + ...|+. +.|...++ ++++ +++.+.+| ++.
T Consensus 46 ~~i~l~~~~~~~~~~-v~~a~~~~~~~~-~---------~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g----~~~-- 108 (447)
T 3h7f_A 46 DTLEMIASENFVPRA-VLQAQGSVLTNK-Y---------AEGLPGRRYYGGCEHVDVVENLARDRAKALFG----AEF-- 108 (447)
T ss_dssp HSEECCTTCCCCCHH-HHHHHTSGGGGC-C---------CCEETTEESSSCCHHHHHHHHHHHHHHHHHHT----CSE--
T ss_pred CceeEecCCCCCCHH-HHHHHHHHhcCC-c---------cccCCcccccCccHHHHHHHHHHHHHHHHHcC----CCc--
Confidence 568888888877544 444443322100 0 012221 12444444 5566 77776655 333
Q ss_pred EEE-ecChHHHHHHHHHhhcCCCCeEEEcCCCCcCh-HHh--Hhh-hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 123 IVV-TAGATAANELLTFILADPGDALLVPTPYYPGF-DRD--LRW-RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 123 i~~-t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~-~~~--~~~-~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
+.+ ++|+++++..++.+++++||+|+++.|+|..+ ... +.. ..+..+++++++++ ++.+|+++|++.+++.
T Consensus 109 ~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~--- 184 (447)
T 3h7f_A 109 ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPA-THLIDMDAVRATALEF--- 184 (447)
T ss_dssp EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTT-TCSCCHHHHHHHHHHH---
T ss_pred eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcc-cCCcCHHHHHHHHHhc---
Confidence 344 77788999999999999999999999999773 211 111 13556777777643 4679999999999653
Q ss_pred CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc-CCCCCCCcccHHHHHhhhcCCCCCcEEEEecC
Q 046900 198 DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG-SAFSSSEFVSIAEILEARQYKDSERVHIVYSL 276 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~-~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~ 276 (442)
+++++++++|+||++. .+++|.++|++||+++|+||+|.. +.+.+..+..+ . ...+++.|+
T Consensus 185 --~~~~i~~~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~----~-------~~di~~~s~ 246 (447)
T 3h7f_A 185 --RPKVIIAGWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV----P-------HADVVSTTV 246 (447)
T ss_dssp --CCSEEEEECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST----T-------TCSEEEEES
T ss_pred --CCeEEEEcCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC----C-------CCcEEEecC
Confidence 6788899899999986 488999999999999999999743 33333211111 1 112678999
Q ss_pred cccCCCCCceeEEEeecCHHHHHHHHHcccc---CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046900 277 SKDLGLPGFRVGTIYSYNDKVVTTARRMSSF---TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA 353 (442)
Q Consensus 277 SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (442)
||++ +|+|.||++++ +.+.+.+...... +......+.++...+.. ....++++.++.+.++++++.+.|.+.
T Consensus 247 sK~l--~G~~gG~i~~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 247 HKTL--GGGRSGLIVGK-QQYAKAINSAVFPGQQGGPLMHVIAGKAVALKI--AATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp SGGG--CCCSCEEEEEC-GGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH--TTSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred CcCC--CCCCeEEEEEC-HHHHHHHhhhcCCcccCCccHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9987 58899999994 5555555443222 22223333333333321 112235677888889999999999887
Q ss_pred -----CCeeec-CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEe----CCCCCCCCCCCEEEEEeec-----C
Q 046900 354 -----GIECLK-GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNIS----PGSSCHCSEPGWFRVCFAN-----M 418 (442)
Q Consensus 354 -----g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~----pg~~f~~~~~~~iRls~~~-----~ 418 (442)
|+++.. +..++++|+++..... +. +.+..+++++||.+. |+..+++..++++||++.. +
T Consensus 322 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~ 395 (447)
T 3h7f_A 322 DVAKAGVSVVSGGTDVHLVLVDLRDSPL-----DG-QAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGF 395 (447)
T ss_dssp HHHHTTCEEGGGSCSSSEEEEECTTSSC-----CH-HHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTC
T ss_pred cccCCCeEEecCCCCCCEEEEEcCCCCC-----CH-HHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCC
Confidence 888764 3456688888864211 12 334455566699998 6543333345779998752 4
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 046900 419 SEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 419 ~~e~i~~~l~~l~~~l~~~ 437 (442)
++++++++++.|.+++.+.
T Consensus 396 ~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 396 GDTEFTEVADIIATALATG 414 (447)
T ss_dssp CHHHHHHHHHHHHHHHHSG
T ss_pred CHHHHHHHHHHHHHHHhcc
Confidence 7899999999999988653
No 180
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.95 E-value=1.3e-26 Score=231.79 Aligned_cols=333 Identities=11% Similarity=0.085 Sum_probs=207.5
Q ss_pred CCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCCC
Q 046900 46 NPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLN 121 (442)
Q Consensus 46 ~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~ 121 (442)
....+|||+.+. +++ +++.+.+.+.+.... ...| .+..++++++++++.+.++ .++
T Consensus 55 ~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~------------~~~~---~~~~~~~~~la~~l~~~~~-----~~~ 114 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSH------------GVQY---AASHPLEVRWAERIVAAFP-----SIR 114 (453)
T ss_dssp TCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTT------------TCSS---CSSCHHHHHHHHHHHHHCT-----TCS
T ss_pred CCCEEEECcccHhhcccCCCCHHHHHHHHHHHHh------------CCCC---CCCCHHHHHHHHHHHhhCC-----CCC
Confidence 345688998775 333 345555555544321 0112 2356899999999987642 478
Q ss_pred cEEEecChHHHHHHHHHh---hcCCCCeEEEcCCCCcChHHhHhhh----------cCc------EEEEEecCCCCCCcC
Q 046900 122 RIVVTAGATAANELLTFI---LADPGDALLVPTPYYPGFDRDLRWR----------TGI------KIVPIHCDSSNNFQI 182 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~---l~~~gd~Vl~~~p~y~~~~~~~~~~----------~G~------~v~~v~~~~~~~~~~ 182 (442)
+|++|+|+++++..++++ +.+ ++.|++.+|+|+++...+... .|+ .++.++. .
T Consensus 115 ~v~~~~gg~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~ 186 (453)
T 2cy8_A 115 KLRFTGSGTETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------D 186 (453)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEECT-------T
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------C
Confidence 999999999999999887 665 467888889998765432210 122 1233331 3
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEeCCC-CCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHh
Q 046900 183 TPQALEAAYKEAESKDMRVRGVLITNPS-NPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILE 260 (442)
Q Consensus 183 d~~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~ 260 (442)
|++.|++.+++.. .+++ +++++|+ ||||.++ +.+.+++|.++|++||+++|+||+|.++ +.+. .... +...
T Consensus 187 d~~~le~~l~~~~---~~~~-~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~-~~~~ 259 (453)
T 2cy8_A 187 DIEGMREVFANHG---SDIA-AFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN-HGMQ-ALLD 259 (453)
T ss_dssp CHHHHHHHHHHHG---GGEE-EEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT-THHH-HHHT
T ss_pred CHHHHHHHHHhcC---CCEE-EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc-hhhh-HHhC
Confidence 7899999987531 2555 4566664 7799765 7999999999999999999999999987 4442 1111 1111
Q ss_pred hhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-------ccccCCCcHHHHHHHHHHhcC-chhHHHHH
Q 046900 261 ARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-------MSSFTLISSQTQYLLASMLSN-KKFTENYI 332 (442)
Q Consensus 261 ~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-------~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~ 332 (442)
.... +.||||.++ +|+|+||+++ ++.+.+.+.. ....+..+++++.++.+.++. . .
T Consensus 260 -----~~~d---i~s~sK~l~-~G~~~G~v~~-~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~------~ 323 (453)
T 2cy8_A 260 -----VQPD---LTCLAKASA-GGLPGGILGG-REDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL------E 323 (453)
T ss_dssp -----CCCS---EEEEEGGGG-TTSSCEEEEE-CHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH------H
T ss_pred -----CCCc---EEEEChhhh-CCcceEEEec-hHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh------h
Confidence 0122 348999998 6999999999 4566554433 112345678888887777653 1 0
Q ss_pred HHHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCC-----c--c---c---ccChhhHHHHHHHHHHcCcE
Q 046900 333 KTNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSP-----L--L---E---EQTREGELALWDSMLHEVKL 395 (442)
Q Consensus 333 ~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~-----~--~---~---~~~~~~~~~l~~~l~~~~gi 395 (442)
....+.++++++++.+.|++ .++....+..|.++|++++. . . . ........++++.|+++ ||
T Consensus 324 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gv 402 (453)
T 2cy8_A 324 DDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILE-GV 402 (453)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHT-TE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHC-Ce
Confidence 12233444445555555543 34433233345588998874 1 0 0 00112356788888876 99
Q ss_pred EEeCCCCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHHHHHHh
Q 046900 396 NISPGSSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 396 ~v~pg~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.+.|+ +.+|+++.. +++++++++++|++++++..+
T Consensus 403 ~v~~~--------~~~~l~~~~-t~~~i~~~l~~l~~~l~~~~~ 437 (453)
T 2cy8_A 403 DIGGR--------GSVFLSAQH-EREHVEHLVTTFDRVLDRLAD 437 (453)
T ss_dssp ECBTT--------TEEECCTTC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCC--------CCEEeeccC-CHHHHHHHHHHHHHHHHHHHh
Confidence 99653 237887655 999999999999999887643
No 181
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.95 E-value=2.5e-26 Score=229.65 Aligned_cols=316 Identities=11% Similarity=0.037 Sum_probs=221.2
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCc-----EEEecChHHHHHHHHHhhcC--------CC-----CeEEEcC
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNR-----IVVTAGATAANELLTFILAD--------PG-----DALLVPT 151 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~-----i~~t~G~~~ai~~~~~~l~~--------~g-----d~Vl~~~ 151 (442)
+|....+..++++++.+++.+.+| ++.++ +++|+|+++++.+++.++.+ +| +.|+++.
T Consensus 72 ~~~~~~~~~~l~~~~~~~la~l~g----~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~ 147 (452)
T 2dgk_A 72 DKEEYPQSAAIDLRCVNMVADLWH----APAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP 147 (452)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTT----CCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS
T ss_pred ChhhChhHHHHHHHHHHHHHHHhC----CCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC
Confidence 355556888999999999998877 44444 99999999999999888754 55 5899999
Q ss_pred CCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHh
Q 046900 152 PYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATR 231 (442)
Q Consensus 152 p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~ 231 (442)
+|..+...+.. .|++++.+|+++ ++|.+|+++|++++.+ ++++|++++|+||||.+.+ +++|.++|++
T Consensus 148 -~h~~~~~~~~~-~G~~v~~v~~~~-~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~ 215 (452)
T 2dgk_A 148 -VQICWHKFARY-WDVELREIPMRP-GQLFMDPKRMIEACDE------NTIGVVPTFGVTYTGNYEF---PQPLHDALDK 215 (452)
T ss_dssp -CCHHHHHHHHH-TTCEEEECCCBT-TBCSCCHHHHHHHCCT------TEEEEECBBSCTTTCBBCC---HHHHHHHHHH
T ss_pred -CcHHHHHHHHH-cCceEEEEecCC-CCCeECHHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHHHHHHH
Confidence 99999998885 899999999875 3578999999999865 7889999999999999977 7777888888
Q ss_pred c------CcEEEEeccCCcCCC---CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHH-HHHH
Q 046900 232 K------NIHLVSDEIYSGSAF---SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKV-VTTA 301 (442)
Q Consensus 232 ~------~~~vi~De~y~~~~~---~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~-~~~~ 301 (442)
+ ++++++|++|+.+.. .......+ . ..+-..++.|++| ++++|+++||+++.++.. .+.+
T Consensus 216 ~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~--------~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~~~~~~ 285 (452)
T 2dgk_A 216 FQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF-R--------LPRVKSISASGHK-FGLAPLGCGWVIWRDEEALPQEL 285 (452)
T ss_dssp HHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST-T--------STTEEEEEEETTT-TTCCCSSCEEEEESSGGGSCGGG
T ss_pred HhhccCCCCcEEEEcccHHHHHHhhCccchhhc-C--------CCCCcEEEECccc-ccCCCCCeEEEEEcCHHHHHHHh
Confidence 5 999999999997542 11100110 0 0133346778999 556899999999965532 2322
Q ss_pred HHccccC-----------CC---cHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC-----C
Q 046900 302 RRMSSFT-----------LI---SSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKG-----N 361 (442)
Q Consensus 302 ~~~~~~~-----------~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-----~ 361 (442)
.....+. .. ..+.|.++...+. .+.+++..+++.++++++.+.|++. ++++..+ .
T Consensus 286 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~ 360 (452)
T 2dgk_A 286 VFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG-----REGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEG 360 (452)
T ss_dssp CEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTB
T ss_pred ccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCC
Confidence 1111110 00 2344555444442 2345677888889999999999987 5887643 3
Q ss_pred ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCC-CCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHHHh
Q 046900 362 AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCH-CSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 362 ~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~-~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.+ ++.+.++.... ...+..++.+.|.++ ||.+..+.... ..+.+++|++++. .++++++++++.|+++++...+
T Consensus 361 ~~-~v~f~~~~~~~--~~~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 361 IP-AVCFKLKDGED--PGYTLYDLSERLRLR-GWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp SS-EEEEEECTTCC--CSCCHHHHHHHHHHT-TCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eE-EEEEEecCccc--ccCCHHHHHHHHHhc-CCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 44 55556653210 000246788888776 98654321111 1234689999973 2689999999999999887654
Q ss_pred h
Q 046900 440 R 440 (442)
Q Consensus 440 ~ 440 (442)
.
T Consensus 437 ~ 437 (452)
T 2dgk_A 437 H 437 (452)
T ss_dssp C
T ss_pred C
Confidence 3
No 182
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.95 E-value=7.6e-27 Score=231.49 Aligned_cols=332 Identities=13% Similarity=0.120 Sum_probs=213.3
Q ss_pred CCCCceeeeeccc--ccc--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccCC
Q 046900 45 TNPSGVIQMGLAE--NQV--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFDL 120 (442)
Q Consensus 45 ~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 120 (442)
..+..+|||+.+. +.+ +++.+.+.+.+.... ...|. +..++++++++++.+.++ .+
T Consensus 49 ~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~------------~~~~~---~~~~~~~~l~~~l~~~~~-----~~ 108 (424)
T 2e7u_A 49 ADGNRYLDYVMSWGPLILGHAHPKVLARVRETLER------------GLTFG---APSPLEVALAKKVKRAYP-----FV 108 (424)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHT------------CSCCS---SCCHHHHHHHHHHHHHCT-----TC
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHh------------CCCCC---CCCHHHHHHHHHHHHhCC-----CC
Confidence 3455688998775 444 345555555543211 01121 234666677777766532 47
Q ss_pred CcEEEecChHHHHHHHHHh---hcCCCCeEEEcCCCCcChHHhHhhh-------------cCc------EEEEEecCCCC
Q 046900 121 NRIVVTAGATAANELLTFI---LADPGDALLVPTPYYPGFDRDLRWR-------------TGI------KIVPIHCDSSN 178 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~---l~~~gd~Vl~~~p~y~~~~~~~~~~-------------~G~------~v~~v~~~~~~ 178 (442)
++|++|+|+++++..+++. +. +++.|++.+|+|+++...+... .|+ +++.+|.
T Consensus 109 ~~v~~~~~g~ea~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~---- 183 (424)
T 2e7u_A 109 DLVRFVNSGTEATMSALRLARGYT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY---- 183 (424)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT----
T ss_pred CEEEEeCCHHHHHHHHHHHHHHhh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC----
Confidence 8999999999999999885 54 4578999999998865432200 122 3444442
Q ss_pred CCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCC-CCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHH
Q 046900 179 NFQITPQALEAAYKEAESKDMRVRGVLITNPSNP-LGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIA 256 (442)
Q Consensus 179 ~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NP-tG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~ 256 (442)
.|++.|++.+++.. .++ ++++++|+|+ ||.++ +.+.+++|.++ ++||+++|+||+|.++ ..+.. ...
T Consensus 184 ---~d~~~le~~l~~~~---~~~-~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~--~~~ 252 (424)
T 2e7u_A 184 ---NDPEGLREVLKRRG---EEI-AAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG--GAT 252 (424)
T ss_dssp ---TCHHHHHHHHHHHG---GGE-EEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT--HHH
T ss_pred ---CCHHHHHHHHHhCC---CCE-EEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh--HHH
Confidence 37899999987531 144 4667788765 89765 78889999999 9999999999999987 33321 111
Q ss_pred HHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-----ccccCCCcHHHHHHHHHHhcCchhHHHH
Q 046900 257 EILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-----MSSFTLISSQTQYLLASMLSNKKFTENY 331 (442)
Q Consensus 257 ~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 331 (442)
+...- ... +.||||++| +|+|+||+++ ++.+.+.+.. ....+..+++++.++.+.++.. ++
T Consensus 253 ~~~~~-----~~d---i~s~sK~l~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~---~~- 318 (424)
T 2e7u_A 253 ELLGL-----KPD---LVTLGKILG-GGLPAAAYAG-RREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELL---EE- 318 (424)
T ss_dssp HHHTC-----CCS---EEEECGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHH---HH-
T ss_pred HHhCC-----Ccc---hhhhhhhhh-CCcceEEEEE-cHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHH---Hh-
Confidence 12110 122 349999998 6999999999 4566655544 1123456788888887777532 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHh----CCCeeecCCceEEEEEecCCcc-cc------cChhhHHHHHHHHHHcCcEEEeCC
Q 046900 332 IKTNRERLQKRYQMIIEGLRS----AGIECLKGNAGLFCWMNLSPLL-EE------QTREGELALWDSMLHEVKLNISPG 400 (442)
Q Consensus 332 ~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~-~~------~~~~~~~~l~~~l~~~~gi~v~pg 400 (442)
..+..++++++++++.+.|++ .++....+..|.++|++++... .. .......++++.|+++ ||.+.||
T Consensus 319 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~ 397 (424)
T 2e7u_A 319 NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDR-GIYWPPS 397 (424)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTT-TEECCSS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHC-CeEEecc
Confidence 133455566666666666654 3553322334558899986521 00 0112356788888765 9999997
Q ss_pred CCCCCCCCCEEEEEeecCCHHHHHHHHHHHHHHH
Q 046900 401 SSCHCSEPGWFRVCFANMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 401 ~~f~~~~~~~iRls~~~~~~e~i~~~l~~l~~~l 434 (442)
.. ..+|+++.. +++++++++++|++++
T Consensus 398 ~~------~~~~~~~~~-t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 398 NF------EAAFLSVAH-REEDVEKTLEALRKAL 424 (424)
T ss_dssp SS------SCEECCTTC-CHHHHHHHHHHHHHHC
T ss_pred CC------CceEeeccC-CHHHHHHHHHHHHHhC
Confidence 42 247887655 8999999999998763
No 183
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.95 E-value=1.2e-26 Score=222.37 Aligned_cols=277 Identities=15% Similarity=0.156 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHh---hhcCcEEEEEecC
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRTGIKIVPIHCD 175 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~~G~~v~~v~~~ 175 (442)
++++++|++++ .+ +.|++++| ++++..++.+++++||.|+++.|+|+.+...+. ...|++++.++.
T Consensus 2 ~l~~~la~~~g--------~~-~~i~~~sG-~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 70 (331)
T 1pff_A 2 ALEGKIAKLEH--------AE-ACAATASG-MGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM- 70 (331)
T ss_dssp HHHHHHHHHHT--------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-
T ss_pred hHHHHHHHHhC--------CC-eEEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-
Confidence 68899999875 23 45555555 899999999999999999999999998876652 137999998875
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHh-cCcEEEEeccCCcCCCCCCCccc
Q 046900 176 SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATR-KNIHLVSDEIYSGSAFSSSEFVS 254 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~-~~~~vi~De~y~~~~~~~~~~~s 254 (442)
.|++.+++.+++ ++++|++++|+||||.+++ +++|.++|++ +|+++|+||+|+.+.+.. +
T Consensus 71 ------~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~----~ 131 (331)
T 1pff_A 71 ------AVPGNIEKHLKP------NTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN----P 131 (331)
T ss_dssp ------TSTTHHHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC----G
T ss_pred ------CCHHHHHHhhcC------CCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC----h
Confidence 367888887753 7899999999999999998 8888999999 999999999998644321 1
Q ss_pred HHHHHhhhcCCCCCcEEEEecCcccCCCCCce-eEEEeecCHHHHHHHHHcccc---CCCcHHHHHHHHHHhcCchhHHH
Q 046900 255 IAEILEARQYKDSERVHIVYSLSKDLGLPGFR-VGTIYSYNDKVVTTARRMSSF---TLISSQTQYLLASMLSNKKFTEN 330 (442)
Q Consensus 255 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R-iG~i~~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~ 330 (442)
+ + .++.+++.|+||.++.+|.| +||++++++.+.+.++..... +..+++.+.++...++.
T Consensus 132 ~-----~-----~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~------ 195 (331)
T 1pff_A 132 L-----D-----LGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT------ 195 (331)
T ss_dssp G-----G-----GTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH------
T ss_pred h-----h-----cCCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch------
Confidence 1 1 25678899999999989999 899999543677777654443 24566677665555542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC---------------CCeeecC---CceEEEEEecCCcccccChhhHHHHHHHHHHc
Q 046900 331 YIKTNRERLQKRYQMIIEGLRSA---------------GIECLKG---NAGLFCWMNLSPLLEEQTREGELALWDSMLHE 392 (442)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~---------------g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 392 (442)
+....+...++.+.+.+.|++. ++++..+ ..+.++.+.++. ..++...+ ++
T Consensus 196 -~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l-~~ 264 (331)
T 1pff_A 196 -LDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG---------LEKAKKVL-DN 264 (331)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS---------HHHHHHHH-HT
T ss_pred -HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC---------HHHHHHHH-Hh
Confidence 1222233333444444444332 2222211 123366666652 33444444 55
Q ss_pred CcEEEeCCCCCC------------------------CCCCCEEEEEeecC-CHHHHHHHHHHHHH
Q 046900 393 VKLNISPGSSCH------------------------CSEPGWFRVCFANM-SEQTLEVALKRIHN 432 (442)
Q Consensus 393 ~gi~v~pg~~f~------------------------~~~~~~iRls~~~~-~~e~i~~~l~~l~~ 432 (442)
.||.+++.+.-+ +..++++||+++.. ++++++.+++.|++
T Consensus 265 ~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 265 CHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp CSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 699887653110 11257999999842 56677777776654
No 184
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.95 E-value=1.7e-26 Score=231.60 Aligned_cols=352 Identities=13% Similarity=0.099 Sum_probs=222.5
Q ss_pred CCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+|||+.+ .+.++ ++.+.+.+.+..... ...|....+..+.+.++++.+.+..+ ..
T Consensus 51 d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~-----------~~~~~~~~~~~~~~~~lae~l~~~~~----~~ 115 (472)
T 3hmu_A 51 DSEGEEILDAMAGLWCVNIGYGRDELAEVAARQMREL-----------PYYNTFFKTTHVPAIALAQKLAELAP----GD 115 (472)
T ss_dssp ETTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHC-----------SCCCSSSSEECHHHHHHHHHHHHHSC----TT
T ss_pred ECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhc-----------cccccccccCCHHHHHHHHHHHHhCC----CC
Confidence 3456678999876 45553 355555554432110 01222223345667777777776543 45
Q ss_pred CCcEEEecChHHHHHHHHHhhcC--------CCCeEEEcCCCCcChHHhHhhhcCc-----------EEEEEecCC--C-
Q 046900 120 LNRIVVTAGATAANELLTFILAD--------PGDALLVPTPYYPGFDRDLRWRTGI-----------KIVPIHCDS--S- 177 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~~G~-----------~v~~v~~~~--~- 177 (442)
.++|++++|+++++..+++++.. +++.|++.+|+|.++...+....|. .+..++... .
T Consensus 116 ~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~ 195 (472)
T 3hmu_A 116 LNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAE 195 (472)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccC
Confidence 67999999999999999998864 4689999999999877554421221 233444221 0
Q ss_pred CCCcCC--------HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCC
Q 046900 178 NNFQIT--------PQALEAAYKEAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFS 248 (442)
Q Consensus 178 ~~~~~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~ 248 (442)
+.+ .| ++.|++.+++... .++++|++..++|++|.+. +.+.+++|.++|++||+++|+||+|.+|...
T Consensus 196 ~~~-~~~~~~~~~~~~~le~~i~~~~~--~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~ 272 (472)
T 3hmu_A 196 GGD-MDPEEFGLARARELEEAILELGE--NRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRT 272 (472)
T ss_dssp CTT-CCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT
T ss_pred Ccc-cCHHHHHHHHHHHHHHHHHhcCC--CCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCccc
Confidence 111 23 7888888864311 2455545444467777755 8888999999999999999999999987665
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH----ccccCCCcHHHHHHHHHHhcC
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR----MSSFTLISSQTQYLLASMLSN 324 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~----~~~~~~~s~~~q~~~~~~l~~ 324 (442)
+..+ .. +... ....+ .+|||+++..|+|+||+++ ++.+.+.+.. ....+..++++|.++.+.|+.
T Consensus 273 G~~~-a~-~~~~-----v~pdi---~t~sK~l~gg~~plG~v~~-~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~ 341 (472)
T 3hmu_A 273 GNWF-GT-QTMG-----IRPHI---MTIAKGLSSGYAPIGGSIV-CDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRI 341 (472)
T ss_dssp SSSC-HH-HHHT-----CCCSE---EEECGGGTTTSSCCEEEEE-EHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHH
T ss_pred Cccc-hh-HHhC-----CCCce---eeechhhhcCCcceEEEEE-CHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHH
Confidence 5422 22 2211 11223 3689999844599999999 5677777632 122356788999988888763
Q ss_pred chhHHHHHHHHHHHHH-HHHHHHHHHHHhC----CCeeecCCceEEEEEecCCccccc-C-----hhhHHHHHHHHHHcC
Q 046900 325 KKFTENYIKTNRERLQ-KRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSPLLEEQ-T-----REGELALWDSMLHEV 393 (442)
Q Consensus 325 ~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~~-~-----~~~~~~l~~~l~~~~ 393 (442)
.+ + +...+.++ ++.+++.+.|+++ .+....+.|. |+++++....... . .....++++.|+++
T Consensus 342 ~~---~--~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 414 (472)
T 3hmu_A 342 LE---E--ENILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVGM-MASIALTPNKASRAKFASEPGTIGYICRERCFAN- 414 (472)
T ss_dssp HH---H--TTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEETT-EEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHT-
T ss_pred HH---H--hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc-eEEEEEecCccccccccchhHHHHHHHHHHHHHC-
Confidence 21 1 12334444 4555555555443 2333444554 6667765321100 0 11256788888877
Q ss_pred cEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 394 KLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 394 gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
||.+.|+. +++||+.. ..+++++++++++|++++++..
T Consensus 415 Gv~v~~~g-------~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 415 NLIMRHVG-------DRMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp TBCCEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999852 68999954 3389999999999999988754
No 185
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.95 E-value=3.1e-26 Score=226.69 Aligned_cols=302 Identities=14% Similarity=0.202 Sum_probs=206.5
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEE
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKI 169 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v 169 (442)
|++..|..++++++++.+.+.+| ++ ++++++++++++.+++.++ +++||.|+++.|+|..+...+.. .|+++
T Consensus 34 ~~~~~g~~~l~~~l~~~la~~~g----~~--~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~ 106 (418)
T 2c81_A 34 SGYWTGEESMERKFAKAFADFNG----VP--YCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAVLN-VNALP 106 (418)
T ss_dssp TSBCCSSCCHHHHHHHHHHHHHT----CS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHH-TTCEE
T ss_pred cCcccCCHHHHHHHHHHHHHHhC----CC--cEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHHHHH-cCCEE
Confidence 66666755555555555555444 22 5666777789999999999 89999999999999999998884 89999
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC-CC
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA-FS 248 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~-~~ 248 (442)
+.+++++ ++|.+|++.|++.+++ ++++|+++ ||||...+ +++|+++|+++|++||+||+|+.+. ++
T Consensus 107 ~~~~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~---~~~G~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~~ 173 (418)
T 2c81_A 107 VFVDVEA-DTYCIDPQLIKSAITD------KTKAIIPV---HLFGSMAN---MDEINEIAQEHNLFVIEDCAQSHGSVWN 173 (418)
T ss_dssp EEECBCT-TTCSBCHHHHGGGCCT------TEEEECCB---CCTTCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEET
T ss_pred EEEecCC-CCCCcCHHHHHHhhCC------CCeEEEEe---CCcCCccc---HHHHHHHHHHCCCEEEEECcccccCccC
Confidence 9999875 3578999999988764 77877754 58998765 7888899999999999999999865 44
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecC--cccCCCCCceeEEEeecCHHHHHHHHHccccC--------------C---
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSL--SKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT--------------L--- 309 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~--SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~--------------~--- 309 (442)
+....+ .. .+.+.|| ||.+|. | |+||++++++.+.+.++.....+ .
T Consensus 174 ~~~~~~------------~~-~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (418)
T 2c81_A 174 NQRAGT------------IG-DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLV 238 (418)
T ss_dssp TEETTS------------SS-SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEE
T ss_pred CEeccc------------cc-ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhcc
Confidence 321111 11 1567788 999985 8 99999996666666554322110 0
Q ss_pred -----------CcHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee-cCCc-eEEEE----Eec
Q 046900 310 -----------ISSQTQYLLA-SMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECL-KGNA-GLFCW----MNL 370 (442)
Q Consensus 310 -----------~s~~~q~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~-g~~~~----~~~ 370 (442)
++ ..+.++. ..++ ++++..++.++.++++.+.|.+. |+++. .+++ +...| +.+
T Consensus 239 ~~~~~~g~~~~~~-~~~aa~~~~~l~-------~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~ 310 (418)
T 2c81_A 239 KKGDIQGSNYCLS-EFQSAILLDQLQ-------ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRF 310 (418)
T ss_dssp ECCSSCCCBCCCC-HHHHHHHHHHHT-------THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEE
T ss_pred ccccccCcCCCcC-HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEE
Confidence 11 1122211 1111 23445556666778888899876 78776 4555 33332 566
Q ss_pred CCcccccChhhHHHHHHHHHHcCcEE---EeCCCCCC---------------------------CCC-------CCEEEE
Q 046900 371 SPLLEEQTREGELALWDSMLHEVKLN---ISPGSSCH---------------------------CSE-------PGWFRV 413 (442)
Q Consensus 371 ~~~~~~~~~~~~~~l~~~l~~~~gi~---v~pg~~f~---------------------------~~~-------~~~iRl 413 (442)
+.... .. .+..++.+.|.+++||. +.+|.... ... .+.+||
T Consensus 311 ~~~~~-~~-~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl 388 (418)
T 2c81_A 311 DPVKF-GG-LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVI 388 (418)
T ss_dssp CGGGT-TT-CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEE
T ss_pred ccccc-cc-cCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEe
Confidence 53000 00 02567888887666999 88875210 000 158999
Q ss_pred Eee-cC-CHHHHHHHHHHHHHHHHHH
Q 046900 414 CFA-NM-SEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 414 s~~-~~-~~e~i~~~l~~l~~~l~~~ 437 (442)
++. .. ++++++++++.|++++++.
T Consensus 389 ~~~~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 389 HHAILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp EGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred cCCccCCCHHHHHHHHHHHHHHHHhh
Confidence 996 44 7999999999999988754
No 186
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.95 E-value=7.3e-26 Score=220.37 Aligned_cols=290 Identities=11% Similarity=0.077 Sum_probs=208.2
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh---cCCCCeEEEcCCCCcChHHhHhhhcCcEEE
Q 046900 94 YHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL---ADPGDALLVPTPYYPGFDRDLRWRTGIKIV 170 (442)
Q Consensus 94 ~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~ 170 (442)
.....++|++++++++ . +++++|+|+++++..++.++ +++||+|+++.|+|+.+...+.. .|++++
T Consensus 31 ~~~~~~l~~~la~~~~--------~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~ 99 (375)
T 2fnu_A 31 GKRSLLFEEALCEFLG--------V--KHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLLE-SGYTPV 99 (375)
T ss_dssp SHHHHHHHHHHHHHHT--------C--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHHHH-TTCEEE
T ss_pred ChHHHHHHHHHHHHhC--------C--CeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHHHH-CCCEEE
Confidence 4467899999999985 2 28999999999999999999 89999999999999999998885 899999
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
.+++++++ .+|++.|++.+++ ++++|++++| ||.+.+ +++|.++|+++|++||+|++|+.+.....
T Consensus 100 ~~~~~~~~--~~d~~~l~~~i~~------~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~~ 165 (375)
T 2fnu_A 100 FAGIKNDG--NIDELALEKLINE------RTKAIVSVDY---AGKSVE---VESVQKLCKKHSLSFLSDSSHALGSEYQN 165 (375)
T ss_dssp ECCBCTTS--SBCGGGSGGGCCT------TEEEEEEECG---GGCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEETT
T ss_pred EeccCCCC--CCCHHHHHhhcCc------CceEEEEeCC---cCCccC---HHHHHHHHHHcCCEEEEECccccCCeECC
Confidence 99987643 6899999988754 7888888876 999988 67888899999999999999985432110
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCc--ccCCCCCceeEEEee-cCHHHHHHHHHccccC------------------C
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLS--KDLGLPGFRVGTIYS-YNDKVVTTARRMSSFT------------------L 309 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~S--K~~g~~G~RiG~i~~-~~~~~~~~~~~~~~~~------------------~ 309 (442)
.. + .. .+ .+++.|+| |.+|. | +|++++ +++.+.+.++.....+ .
T Consensus 166 --~~---~-~~-----~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (375)
T 2fnu_A 166 --KK---V-GG-----FA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFR 230 (375)
T ss_dssp --EE---T-TS-----SS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCC
T ss_pred --ee---c-cc-----cC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCC
Confidence 01 1 10 12 36778888 99974 6 688877 4566666555432111 2
Q ss_pred CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC-----CceEEEEEecCCcccccChhhHH
Q 046900 310 ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKG-----NAGLFCWMNLSPLLEEQTREGEL 383 (442)
Q Consensus 310 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~ 383 (442)
++.+...+....+ + ++++..++++++++++.+.|++. |+++..+ ..++++|+.++... ..+..
T Consensus 231 ~~~~~~a~~~~~~---~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 299 (375)
T 2fnu_A 231 LNEIQSALGLSQL---K----KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKF----FTCKK 299 (375)
T ss_dssp CCHHHHHHHHHHH---T----THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGG----GGGHH
T ss_pred CCHHHHHHHHHHH---H----HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccc----cchHH
Confidence 2333222222111 1 24566777888899999999887 7777654 13345577776410 00256
Q ss_pred HHHHHHHHcCcEEEeCCCCCCCC---------------------CCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 384 ALWDSMLHEVKLNISPGSSCHCS---------------------EPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 384 ~l~~~l~~~~gi~v~pg~~f~~~---------------------~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
++.+.|.++ ||.+..+ |.+. ..+++||+++ ..+++++++++++|++++++.
T Consensus 300 ~l~~~L~~~-gi~v~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 300 LILESLHKR-GILAQVH--YKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHHHHHHHT-TEECBCC--CCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHC-CCCcccc--ccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 788888665 9999832 2110 0267999997 237999999999999998764
No 187
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.95 E-value=6.3e-27 Score=234.96 Aligned_cols=319 Identities=14% Similarity=0.208 Sum_probs=208.1
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCC-----C----CeEEEcCCCCcChHHh
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADP-----G----DALLVPTPYYPGFDRD 160 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~-----g----d~Vl~~~p~y~~~~~~ 160 (442)
.|+...+..+||++++++++ .+++++|+|+++++.+++.+++++ | |.|++..+.|..+...
T Consensus 69 ~y~~~~~~~~l~~~la~~~~----------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~ 138 (467)
T 2oqx_A 69 AYSGSRSYYALAESVKNIFG----------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGH 138 (467)
T ss_dssp CSSSCHHHHHHHHHHHHHHC----------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHH
T ss_pred eeccCchhHHHHHHHHHHhC----------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEecccccccchhh
Confidence 57777788999999999974 368999999999999999999888 8 9988774333434444
Q ss_pred HhhhcCcEEEEEecC----CC----CCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC-CcCCCHHHHHHHHHHHHh
Q 046900 161 LRWRTGIKIVPIHCD----SS----NNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPL-GATIQRSVLEELLDFATR 231 (442)
Q Consensus 161 ~~~~~G~~v~~v~~~----~~----~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPt-G~~~~~~~l~~l~~~~~~ 231 (442)
... .|+.++..... .. .++.+|++.|++++++.. ..++++|++++|+||| |.+++.+.+++|+++|++
T Consensus 139 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~ 215 (467)
T 2oqx_A 139 SQI-NGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKK 215 (467)
T ss_dssp HHH-TTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHH
T ss_pred hhc-cCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHH
Confidence 443 67766654211 11 235689999999998521 1268899999999998 899999999999999999
Q ss_pred cCcEEEEeccCCc----------CCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCC-CceeEEEeecCH---HH
Q 046900 232 KNIHLVSDEIYSG----------SAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLP-GFRVGTIYSYND---KV 297 (442)
Q Consensus 232 ~~~~vi~De~y~~----------~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~-G~RiG~i~~~~~---~~ 297 (442)
||+++|+|+++.. ..+.+. +...+..+. ....+ +++.|+||.+|++ | ||++++++ ..
T Consensus 216 ~gi~li~D~a~~~e~~~~~~~~~~~~~g~---~~~~~~~~~-~~~~d--~~~~s~sK~~g~~~G---g~~~~~~~~~~~~ 286 (467)
T 2oqx_A 216 YDIPVVMDSARFAENAYFIKQREAEYKDW---TIEQITRET-YKYAD--MLAMSAKKDAMVPMG---GLLCMKDDSFFDV 286 (467)
T ss_dssp TTCCEEEECTTHHHHHHHHHHHCGGGTTS---CHHHHHHHH-GGGCS--EEEEESSSTTCCSSC---EEEEECSGGGHHH
T ss_pred cCCEEEEEchhhhhhhhhcccccccccCc---cHHHHhhhh-hccCC--eEEEecccccCCCCc---eEEEecChhHHHH
Confidence 9999999965432 123332 333333100 00023 3478999999876 4 88888655 22
Q ss_pred HHHHHHcc----c---cCCCcHHHHHHHHHHhcCchhHHHHHH-HHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEe
Q 046900 298 VTTARRMS----S---FTLISSQTQYLLASMLSNKKFTENYIK-TNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMN 369 (442)
Q Consensus 298 ~~~~~~~~----~---~~~~s~~~q~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~ 369 (442)
...++... . ....+.....++...+. ++++ ...+...++++++.+.|++.|+++. +.+++++|++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~ 359 (467)
T 2oqx_A 287 YTECRTLCVVQEGFPTYGGLEGGAMERLAVGLY------DGMNLDWLAYRIAQVQYLVDGLEEIGVVCQ-QAGGHAAFVD 359 (467)
T ss_dssp HHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHH------HTTCHHHHHHHHHHHHHHHHHHHHTTCCEE-EECSSCEEEE
T ss_pred HHHHHHhhhccCCcccccchhhhHHHHHHHhhH------hhhhHHHHHHHHHHHHHHHHHHHHCCCeee-cCCceEEEEe
Confidence 23333221 1 11222222222222111 1111 2234456778888899988888888 7788899998
Q ss_pred cCC---cccccChhhHHHHHHHHHHcCcEEEeCCCCC--CC---------CCCCEEEEEee-c-CCHHHHHHHHHHHHHH
Q 046900 370 LSP---LLEEQTREGELALWDSMLHEVKLNISPGSSC--HC---------SEPGWFRVCFA-N-MSEQTLEVALKRIHNF 433 (442)
Q Consensus 370 ~~~---~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f--~~---------~~~~~iRls~~-~-~~~e~i~~~l~~l~~~ 433 (442)
++. ......+ +..++++.|++++||.+.|+..| +. ...+++|++++ . .+++++++++++|+++
T Consensus 360 ~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~ 438 (467)
T 2oqx_A 360 AGKLLPHIPADQF-PAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHV 438 (467)
T ss_dssp HHHHSTTSCGGGC-HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHH
T ss_pred chhhcccCCcccc-cHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 742 1111111 14567888844459999995532 11 01378999998 2 4899999999999999
Q ss_pred HHHHH
Q 046900 434 MQKRE 438 (442)
Q Consensus 434 l~~~~ 438 (442)
+++..
T Consensus 439 l~~~~ 443 (467)
T 2oqx_A 439 KENAA 443 (467)
T ss_dssp HHSGG
T ss_pred Hhhhh
Confidence 87643
No 188
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.95 E-value=9.9e-26 Score=221.57 Aligned_cols=280 Identities=18% Similarity=0.176 Sum_probs=190.5
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH----hhhcCcEEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL----RWRTGIKIV 170 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~~G~~v~ 170 (442)
....++++.++++++ . ++.++++++++++..++.+++++||+|+++.|+|+.+...+ . ..|++++
T Consensus 65 ~~~~~l~~~la~~~g--------~--~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-~~g~~~~ 133 (398)
T 1gc0_A 65 PTLNLLEARMASLEG--------G--EAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIG-EFGVKLR 133 (398)
T ss_dssp HHHHHHHHHHHHHHT--------C--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGG-GGTCEEE
T ss_pred hHHHHHHHHHHHHhC--------C--CcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHH-HcCCEEE
Confidence 456788888888764 2 25555556689999999999999999999999999887665 4 4799999
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
.++.+ |++.+++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|..+.+..
T Consensus 134 ~~~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~- 196 (398)
T 1gc0_A 134 HVDMA-------DLQALEAAMTP------ATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR- 196 (398)
T ss_dssp EECTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC-
T ss_pred EECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 88752 78999988864 7899999999999999997 8888999999999999999998654321
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHccc--c-CCCcHHHHHHHHHHhcCch
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRMSS--F-TLISSQTQYLLASMLSNKK 326 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~~~--~-~~~s~~~q~~~~~~l~~~~ 326 (442)
++ . .+..+++.|+||.++.+|.|+ ||++++++.+.+.++.... . +..+++.+.++...++.
T Consensus 197 ---~~----~------~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 261 (398)
T 1gc0_A 197 ---PL----E------LGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-- 261 (398)
T ss_dssp ---GG----G------GTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT--
T ss_pred ---ch----h------hCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch--
Confidence 11 1 145688999999999899998 9999854444434443222 2 34677777777666653
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCC-C--------------eeec----CCceEEEEEecCCcccccChhhHHHHHH
Q 046900 327 FTENYIKTNRERLQKRYQMIIEGLRSAG-I--------------ECLK----GNAGLFCWMNLSPLLEEQTREGELALWD 387 (442)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------------~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 387 (442)
+....+...++.+.+.+.|.+.. + ++.. ..++ ++.++++. ..+...
T Consensus 262 -----~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~-~~~~~l~~---------~~~~~~ 326 (398)
T 1gc0_A 262 -----LNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGG-MIAFELKG---------GIGAGR 326 (398)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTT-EEEEEETT---------HHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCce-EEEEEECC---------CHHHHH
Confidence 22334445556666667776531 1 1111 1344 44456653 122344
Q ss_pred HHHHcCcEEEeC---CCCC------------C---------CCCCCEEEEEeecC-CHHHHHHHHHHHHH
Q 046900 388 SMLHEVKLNISP---GSSC------------H---------CSEPGWFRVCFANM-SEQTLEVALKRIHN 432 (442)
Q Consensus 388 ~l~~~~gi~v~p---g~~f------------~---------~~~~~~iRls~~~~-~~e~i~~~l~~l~~ 432 (442)
.++++.|+.++. |+.+ . +..++++|||++.. ++++++.+.+.|++
T Consensus 327 ~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 327 RFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp HHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 455666877765 3221 0 01247999999842 45556666655554
No 189
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=3.1e-26 Score=224.63 Aligned_cols=282 Identities=15% Similarity=0.117 Sum_probs=190.2
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH----hHhhhcCcEEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR----DLRWRTGIKIV 170 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~G~~v~ 170 (442)
.+..++|+++|++++ .+ ++++++++++++.+++. ++++||+|+++.|.|+.... .++ ..|++++
T Consensus 55 ~~~~~lr~~la~~~g--------~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~-~~G~~v~ 122 (393)
T 1n8p_A 55 PNRENLERAVAALEN--------AQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVAN-AHGVETS 122 (393)
T ss_dssp HHHHHHHHHHHHHTT--------CS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTST-TTCSCCE
T ss_pred hhHHHHHHHHHHHhC--------CC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHH-HcCcEEE
Confidence 357899999999875 22 45566666999999999 88999999999999985444 344 3799999
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc----CcEEEEeccCCcCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK----NIHLVSDEIYSGSA 246 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~----~~~vi~De~y~~~~ 246 (442)
.++++ | ++|++++++ ++++|++++|+||||.+++ +++|+++|+++ |+++|+|++|+.+.
T Consensus 123 ~v~~~-------d-~~l~~~i~~------~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~ 185 (393)
T 1n8p_A 123 FTNDL-------L-NDLPQLIKE------NTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPY 185 (393)
T ss_dssp EESSH-------H-HHHHHHSCS------SEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHH
T ss_pred EeCCC-------h-HHHHHhccc------CceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccc
Confidence 98754 6 778877753 7899999999999999998 78888999999 99999999999765
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhc
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLS 323 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~ 323 (442)
+. . . ..+ +..+++.|+||.+|.+|+|+ ||++++++.+.+.+...... ...++..+.++...++
T Consensus 186 ~~-~-~---~~~---------~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 251 (393)
T 1n8p_A 186 IS-N-P---LNF---------GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLK 251 (393)
T ss_dssp HC-C-G---GGG---------TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred cC-C-H---HHc---------CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccc
Confidence 42 1 1 111 35588999999999899999 99998556666665543222 2345555555555554
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhCC--Ce-eecC---------------C--c-eEEEEEecCCcccccChhhH
Q 046900 324 NKKFTENYIKTNRERLQKRYQMIIEGLRSAG--IE-CLKG---------------N--A-GLFCWMNLSPLLEEQTREGE 382 (442)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~~---------------~--~-g~~~~~~~~~~~~~~~~~~~ 382 (442)
. +....+...++++.+.+.|.+.. +. +..| . . +.++++.++... .+.
T Consensus 252 ~-------~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~-----~~~ 319 (393)
T 1n8p_A 252 T-------LHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA-----EAA 319 (393)
T ss_dssp T-------HHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH-----HHH
T ss_pred h-------HHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH-----HHH
Confidence 2 22334445566667777776652 22 1111 1 2 557888886421 134
Q ss_pred HHHHHHHHHcCcEEEeCCCC----------CC-----------CCCCCEEEEEeecC-CHHHHHHHHHHHHH
Q 046900 383 LALWDSMLHEVKLNISPGSS----------CH-----------CSEPGWFRVCFANM-SEQTLEVALKRIHN 432 (442)
Q Consensus 383 ~~l~~~l~~~~gi~v~pg~~----------f~-----------~~~~~~iRls~~~~-~~e~i~~~l~~l~~ 432 (442)
..+...+ +..++.+..|+. +. +..++.+|+|++.. ++++++.+.+.|.+
T Consensus 320 ~~~l~~l-~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~ 390 (393)
T 1n8p_A 320 SKFASST-RLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQ 390 (393)
T ss_dssp HHHHHHC-SSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHhhC-CcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence 4555544 333555554432 11 01247899999842 45556665655554
No 190
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.95 E-value=3e-25 Score=219.89 Aligned_cols=283 Identities=14% Similarity=0.161 Sum_probs=197.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----HhhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~~G~~v~~ 171 (442)
...++|+++|++++ .+ +.|++++|+ +++..++.+++++||+|+++.|.|..+... ++ ..|++++.
T Consensus 115 ~~~~l~~~lA~l~g--------~~-~~v~~~sG~-~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~-~~G~~v~~ 183 (445)
T 1qgn_A 115 TTVVLEEKISALEG--------AE-STLLMASGM-CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILP-KMGITATV 183 (445)
T ss_dssp HHHHHHHHHHHHHT--------CS-EEEEESCHH-HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGG-GGTCEEEE
T ss_pred HHHHHHHHHHHHhC--------CC-cEEEeCCHH-HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHH-HcCCEEEE
Confidence 45688888888874 22 456665555 999999999999999999999999986653 44 37999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCce-eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRV-RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~-~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
++.+ |++.|++++++ ++ ++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+...+. .
T Consensus 184 v~~~-------d~~~l~~ai~~------~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~-~ 246 (445)
T 1qgn_A 184 IDPA-------DVGALELALNQ------KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ-K 246 (445)
T ss_dssp ECSS-------CHHHHHHHHHH------SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC-C
T ss_pred eCCC-------CHHHHHHHhcc------CCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-C
Confidence 8753 78999999986 67 99999999999999998 778889999999999999999864321 1
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHccc-cCC-CcHHHHHHHHHHhcCchh
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSS-FTL-ISSQTQYLLASMLSNKKF 327 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~-~~~-~s~~~q~~~~~~l~~~~~ 327 (442)
+ .. .+..+++.|+||.+|..| +++||+++ ++.+.+.+..... ++. .+++...++...++.
T Consensus 247 ---~-~~---------~g~Div~~S~sK~~gg~gd~~~G~l~~-~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~--- 309 (445)
T 1qgn_A 247 ---A-LA---------LGADLVLHSATKFLGGHNDVLAGCISG-PLKLVSEIRNLHHILGGALNPNAAYLIIRGMKT--- 309 (445)
T ss_dssp ---T-TT---------TTCSEEEECTTTTTTCSSSCCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG---
T ss_pred ---c-cc---------cCCEEEEECCcccccccccceEEEEEE-CHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH---
Confidence 1 11 134478999999998554 47999999 5556555543332 222 345444444444432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eeecC----------------CceEEEEEecCCcccccChhhHHHHHHHH
Q 046900 328 TENYIKTNRERLQKRYQMIIEGLRSA-GI-ECLKG----------------NAGLFCWMNLSPLLEEQTREGELALWDSM 389 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~l~~~l 389 (442)
+....+...++++.+.+.|++. ++ .+..| ..|.++++.++... +....+...+
T Consensus 310 ----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~-----~~~~~~l~~l 380 (445)
T 1qgn_A 310 ----LHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL-----LTTAKFVDAL 380 (445)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH-----HHHHHHHHHC
T ss_pred ----HHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH-----HHHHHHHHhC
Confidence 2333445566677888888876 44 33322 13457788886521 1244555544
Q ss_pred HHcCcEEEeCCCCCCC---------------------CCCCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 390 LHEVKLNISPGSSCHC---------------------SEPGWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 390 ~~~~gi~v~pg~~f~~---------------------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
+..++.+..|+.+.. ..++.||||++. |+++.+++.|++++++
T Consensus 381 -~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~---Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 381 -KIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGV---EDFDDLKADILQALDS 444 (445)
T ss_dssp -SSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred -CCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 333788888876421 124799999984 4689999999988764
No 191
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.94 E-value=5.1e-25 Score=216.24 Aligned_cols=302 Identities=16% Similarity=0.173 Sum_probs=205.6
Q ss_pred cCCCcc--hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCc
Q 046900 91 FQDYHG--LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGI 167 (442)
Q Consensus 91 Y~~~~g--~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~ 167 (442)
|.+..| ..++|+++|++++ .++|++|+|+++++.+++.++ +++||.|+++.|+|+.+...+.. .|+
T Consensus 26 ~~~~~g~~~~~l~~~la~~~~----------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~~~-~g~ 94 (394)
T 1o69_A 26 YIAPLGEFVNRFEQSVKDYSK----------SENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICY-LKA 94 (394)
T ss_dssp TTSCTTHHHHHHHHHHHHHHC----------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHH-TTC
T ss_pred CccCCChHHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHH-cCC
Confidence 444456 8999999999985 278999999999999999999 89999999999999999998885 899
Q ss_pred EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC-cCC
Q 046900 168 KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS-GSA 246 (442)
Q Consensus 168 ~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~-~~~ 246 (442)
+++.+++++ +|.+|++.|++.+++. ..++++|++++ |||...+ +++|.++|+++|+++|+||+|+ .+.
T Consensus 95 ~~~~v~~~~--~~~~d~~~l~~~i~~~---~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~ 163 (394)
T 1o69_A 95 KPVFIDCDE--TYNIDVDLLKLAIKEC---EKKPKALILTH---LYGNAAK---MDEIVEICKENDIVLIEDAAEALGSF 163 (394)
T ss_dssp EEEEECBCT--TSSBCHHHHHHHHHHC---SSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCE
T ss_pred EEEEEEeCC--CCCcCHHHHHHHHhcc---cCCceEEEEEC---CCCChhh---HHHHHHHHHHcCCEEEEECcCcccce
Confidence 999999873 5789999999998751 11478888885 8997665 7888889999999999999998 444
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCC----------------C
Q 046900 247 FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTL----------------I 310 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~----------------~ 310 (442)
+.+....+ + .. +.+.||||..+++|.|+||++++++.+.+.++.....+. .
T Consensus 164 ~~~~~~~~---~---------~~-~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~ 230 (394)
T 1o69_A 164 YKNKALGT---F---------GE-FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRL 230 (394)
T ss_dssp ETTEETTS---S---------SS-EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBC
T ss_pred eCCccccc---c---------cC-cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCc
Confidence 43321111 0 11 345566433334567999999965677666655333221 1
Q ss_pred cHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC----ceE-EEEEecCCcc-----------
Q 046900 311 SSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN----AGL-FCWMNLSPLL----------- 374 (442)
Q Consensus 311 s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~g~-~~~~~~~~~~----------- 374 (442)
+.....++...+ ++ +++..++++++++++.+.|.+. +++.++. +++ .+++.++...
T Consensus 231 ~~~~aa~~l~~l---~~----l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 302 (394)
T 1o69_A 231 SNVLGAIGVAQM---EV----LEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQKDIN 302 (394)
T ss_dssp CHHHHHHHHHHH---TT----HHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEE
T ss_pred CHHHHHHHHHHH---HH----HHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhcccccccccc
Confidence 222222222112 22 3456677788889999999877 6555442 343 3566665310
Q ss_pred ----cccChhhHHHHHHHHHHcCcEEEeCCCCCC---C--CCC-------------CEEEEEe-ecCCHHHHHHHHHHHH
Q 046900 375 ----EEQTREGELALWDSMLHEVKLNISPGSSCH---C--SEP-------------GWFRVCF-ANMSEQTLEVALKRIH 431 (442)
Q Consensus 375 ----~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~---~--~~~-------------~~iRls~-~~~~~e~i~~~l~~l~ 431 (442)
......+..++.+.|.++ ||.+++|.... + ..- ..+|+.. ...++++++++++.|+
T Consensus 303 ~~~~~~~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~ 381 (394)
T 1o69_A 303 ISQKNITLHPKISKLIEDLKNK-QIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLIL 381 (394)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHT-TCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHH
T ss_pred ccccccccccCHHHHHHHHHHc-CCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHH
Confidence 000001356788888665 99999985320 0 000 2234333 3348999999999999
Q ss_pred HHHHH
Q 046900 432 NFMQK 436 (442)
Q Consensus 432 ~~l~~ 436 (442)
+++..
T Consensus 382 ~~~~~ 386 (394)
T 1o69_A 382 KSIKA 386 (394)
T ss_dssp HHHC-
T ss_pred HHHhc
Confidence 88764
No 192
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.94 E-value=4.2e-26 Score=226.48 Aligned_cols=345 Identities=12% Similarity=0.059 Sum_probs=205.7
Q ss_pred CCCCCceeeeeccc--cccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLAE--NQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+||++.+. +.++ ++.+.+.+.+..... ....|+. +.+.++++.+.+..+ .
T Consensus 49 d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~----------~~~~~~~-----~~~~~la~~l~~~~~-----~ 108 (429)
T 4e77_A 49 DVDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERG----------LSFGAPT-----EMEVKMAQLVTDLVP-----T 108 (429)
T ss_dssp ETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTC----------SCCSSCC-----HHHHHHHHHHHHHST-----T
T ss_pred ECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhC----------cccCCCC-----HHHHHHHHHHHhhCC-----C
Confidence 34466789998765 3442 455555555443210 0112322 344444444444322 4
Q ss_pred CCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcCcEE--EEEecCCCCCC------------cCC
Q 046900 120 LNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGIKI--VPIHCDSSNNF------------QIT 183 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G~~v--~~v~~~~~~~~------------~~d 183 (442)
+++|++|+|+++++..+++... .+++.|++.+++|.++...+....|... ...+... ++ ..|
T Consensus 109 ~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d 186 (429)
T 4e77_A 109 MDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSP--GVPTDFAKHTLTCTYND 186 (429)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCT--TSCGGGGTTEEEECTTC
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcC--CCCCccCCceeecCCCC
Confidence 7899999999999999988543 3567899999999876542211111111 1111100 00 017
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCC--CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhh
Q 046900 184 PQALEAAYKEAESKDMRVRGVLITNPSNPLGATI--QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEA 261 (442)
Q Consensus 184 ~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~--~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~ 261 (442)
++.|++.+++. +.++ ++++++|+||+|-+. +.+.+++|.++|++||+++|+||+|.++ ..+.. ........
T Consensus 187 ~~~le~~l~~~---~~~~-~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~-~~~~~~~~- 259 (429)
T 4e77_A 187 LASVRQAFEQY---PQEV-ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA-GAQDYYHV- 259 (429)
T ss_dssp HHHHHHHHHHS---TTTE-EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT-CHHHHTTC-
T ss_pred HHHHHHHHHhc---CCCE-EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc-hHHHhcCC-
Confidence 89999998752 1244 466778876655333 3455999999999999999999999987 44432 11211111
Q ss_pred hcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH-----ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHH
Q 046900 262 RQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-----MSSFTLISSQTQYLLASMLSNKKFTENYIKTNR 336 (442)
Q Consensus 262 ~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 336 (442)
... +.||||.++ +|+|+||+++ ++.+.+.+.. ....+..+++++.++.+.++.... ++++++.+
T Consensus 260 -----~pd---i~t~sK~~~-~G~~~G~~~~-~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~ 328 (429)
T 4e77_A 260 -----IPD---LTCLGKIIG-GGMPVGAFGG-RREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ-VGVYETLT 328 (429)
T ss_dssp -----CCS---EEEEEGGGG-TTSCCEEEEE-CHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS-TTHHHHHH
T ss_pred -----CCC---eeeeccccc-CCCCeEEEEE-CHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHH
Confidence 122 358999998 8999999998 5666665543 222356788888888777762110 11223333
Q ss_pred HHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccc--------cChhhHHHHHHHHHHcCcEEEeCCCCCCCCCC
Q 046900 337 ERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEE--------QTREGELALWDSMLHEVKLNISPGSSCHCSEP 408 (442)
Q Consensus 337 ~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~ 408 (442)
+.....++.|.+.+.+.++....+..|+|+|++++..... .......++++.|+++ ||.+.|+..
T Consensus 329 ~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~------ 401 (429)
T 4e77_A 329 ELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEE-GVYLAPSAF------ 401 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHT-TEECCSSTT------
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHC-CeEEeecCC------
Confidence 3333333444444444555544555677899998753100 0112346788888887 999998642
Q ss_pred CEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 046900 409 GWFRVCFANMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 409 ~~iRls~~~~~~e~i~~~l~~l~~~l~~ 436 (442)
..+|+++.. +++++++++++|++++++
T Consensus 402 ~~~~~~~~~-t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 402 EAGFMSLAH-SNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp SCEECCTTC-CHHHHHHHHHHHHHHHTT
T ss_pred CCEEEeccC-CHHHHHHHHHHHHHHHHh
Confidence 347777665 899999999999998753
No 193
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.94 E-value=6.2e-26 Score=220.56 Aligned_cols=289 Identities=16% Similarity=0.217 Sum_probs=206.0
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcE
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIK 168 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~ 168 (442)
.|.+..+..++|+++|++++ .+++++++|+++++..++.++ +++||.|+++.|+|..+...+.. .|++
T Consensus 30 ~~~~~~~~~~l~~~la~~~~----------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~~~-~G~~ 98 (367)
T 3nyt_A 30 QYILGPEVTELEDRLADFVG----------AKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVAL-LGAK 98 (367)
T ss_dssp CCSSCHHHHHHHHHHHHHHT----------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHH-TTCE
T ss_pred CccCChHHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHH-cCCE
Confidence 35455678999999999985 348999999999999999999 89999999999999999999884 8999
Q ss_pred EEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC-CC
Q 046900 169 IVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS-AF 247 (442)
Q Consensus 169 v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~-~~ 247 (442)
++.++++++ .+.+|++.|++++++ ++++|+ |+||||...+ +++|.++|+++|+++|+|++|+.. .+
T Consensus 99 ~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li~D~a~~~g~~~ 165 (367)
T 3nyt_A 99 PVYVDIDPR-TYNLDPQLLEAAITP------RTKAII---PVSLYGQCAD---FDAINAIASKYGIPVIEDAAQSFGASY 165 (367)
T ss_dssp EEEECBCTT-TCSBCGGGTGGGCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBEEECTTTTTCEE
T ss_pred EEEEecCCc-cCCcCHHHHHHhcCc------CCcEEE---eeCCccChhh---HHHHHHHHHHcCCEEEEECccccCCeE
Confidence 999998864 478999999998854 777766 8899998877 777888899999999999999852 22
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecC--cccCCCCCceeEEEeecCHHHHHHHHHcccc--------------CCCc
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSL--SKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--------------TLIS 311 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~--SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--------------~~~s 311 (442)
++..... .+ .+++.|| +|.+|.+|. .|+++++++.+.+.++..... +.++
T Consensus 166 ~~~~~~~------------~~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~ 231 (367)
T 3nyt_A 166 KGKRSCN------------LS-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLD 231 (367)
T ss_dssp TTEETTS------------SS-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCC
T ss_pred CCeeccC------------CC-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCcc
Confidence 2221111 11 3677887 899985576 899999778777776653321 3345
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-CCc---eE-EEEEecCCcccccChhhHHHHH
Q 046900 312 SQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK-GNA---GL-FCWMNLSPLLEEQTREGELALW 386 (442)
Q Consensus 312 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~---g~-~~~~~~~~~~~~~~~~~~~~l~ 386 (442)
++.+.++...++. +++..++.++.++++.+.|.+.++.+.. +.+ ++ ++++.++. ..++.
T Consensus 232 ~~~aa~~~~~l~~-------~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~ 295 (367)
T 3nyt_A 232 TLQAAILLPKLEI-------FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMDN---------RESVQ 295 (367)
T ss_dssp HHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECSS---------HHHHH
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeCC---------HHHHH
Confidence 5555555444432 2333444556667778888877655432 122 11 23333332 56788
Q ss_pred HHHHHcCcEEEeCCCC--------CC-CCC---------CCEEEEEee-cCCHHHHHHHHHHHHHH
Q 046900 387 DSMLHEVKLNISPGSS--------CH-CSE---------PGWFRVCFA-NMSEQTLEVALKRIHNF 433 (442)
Q Consensus 387 ~~l~~~~gi~v~pg~~--------f~-~~~---------~~~iRls~~-~~~~e~i~~~l~~l~~~ 433 (442)
+.|.++ ||.++++.. |. ... ...+||++. .+++++++..++.|++.
T Consensus 296 ~~L~~~-GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 296 ASLKAA-GVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHHHH-TCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred HHHHHC-CCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 888777 999887542 10 000 136899886 45899999999998875
No 194
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.94 E-value=7.6e-25 Score=216.21 Aligned_cols=283 Identities=18% Similarity=0.202 Sum_probs=192.2
Q ss_pred ccCCC--cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----Hhh
Q 046900 90 LFQDY--HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRW 163 (442)
Q Consensus 90 ~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~ 163 (442)
.|+.. ....++++.++++++ .+++++|+|+++++..++.+++++||+|+++.|+|...... ++
T Consensus 49 ~y~~~~~~~~~~l~~~la~~~g----------~~~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~- 117 (412)
T 2cb1_A 49 VYARQKDPTAKALEERLKALEG----------ALEAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLS- 117 (412)
T ss_dssp SBTTTCCHHHHHHHHHHHHHHT----------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTT-
T ss_pred CcCCCCChHHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHH-
Confidence 45433 457888888888875 34899999999999999999999999999999999876554 33
Q ss_pred hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 164 RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 164 ~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
..|++++.++. |+++|++.+++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+
T Consensus 118 ~~g~~~~~~~~--------~~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~~ 180 (412)
T 2cb1_A 118 LMGVTVRYVDP--------EPEAVREALSA------KTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTFG 180 (412)
T ss_dssp TTTCEEEEECS--------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGG
T ss_pred HcCCEEEEECC--------CHHHHHHHhcc------CCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCCc
Confidence 37999998874 47888888764 7899999999999999997 8888999999999999999998
Q ss_pred cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecC-H--------------------------H
Q 046900 244 GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYN-D--------------------------K 296 (442)
Q Consensus 244 ~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~-~--------------------------~ 296 (442)
.+.+... +. . .+..+++.|+||.++.+|.|+|++++.+ . .
T Consensus 181 ~~~~~~~---~~----~------~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 247 (412)
T 2cb1_A 181 AAGALCR---PL----A------WGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARC 247 (412)
T ss_dssp TTTTSCC---GG----G------GTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGH
T ss_pred cccccCC---cc----c------cCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHH
Confidence 7522111 11 1 1456889999999988999999988755 2 2
Q ss_pred HHHHHHHcc--ccC-CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee-cC-----------
Q 046900 297 VVTTARRMS--SFT-LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECL-KG----------- 360 (442)
Q Consensus 297 ~~~~~~~~~--~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~----------- 360 (442)
+.+.++... ..+ ..++....++...++. +....++..++.+++.+.|.+. ++... .|
T Consensus 248 ~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~ 320 (412)
T 2cb1_A 248 FPERVRTLGLSLCGMALSPFNAYLLFQGLET-------VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNA 320 (412)
T ss_dssp HHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-------HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHH
T ss_pred HHHHHHHHHHHhcCCCCChHHhHHHHcCCch-------HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH
Confidence 233333321 122 2234433333333321 2233344556778888888876 66633 12
Q ss_pred -----CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCC---------CCC---------------CCCCEE
Q 046900 361 -----NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSS---------CHC---------------SEPGWF 411 (442)
Q Consensus 361 -----~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~---------f~~---------------~~~~~i 411 (442)
..+.++.+.+ . + ...+. .++++.||.+ .|+. +.. ..++.+
T Consensus 321 ~~~~~~~~~iv~~~~-~--~------~~~~~-~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~i 389 (412)
T 2cb1_A 321 RKYLASGGPILTLDL-G--D------LERAS-RFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLV 389 (412)
T ss_dssp HHHCSSSCSEEEEEC-S--S------HHHHH-HHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEE
T ss_pred HHhCCCCceEEEEEe-C--C------HHHHH-HHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeE
Confidence 1234666676 3 1 23333 3445569998 7741 110 015789
Q ss_pred EEEeecC-CHHHHHHHHHHHH
Q 046900 412 RVCFANM-SEQTLEVALKRIH 431 (442)
Q Consensus 412 Rls~~~~-~~e~i~~~l~~l~ 431 (442)
|+|++.- ++++++.+++.|+
T Consensus 390 R~s~g~~~~~~~i~~l~~al~ 410 (412)
T 2cb1_A 390 RVSVGLEDPLDLLALFEEALE 410 (412)
T ss_dssp EEECCSSCHHHHHHHHHHHHH
T ss_pred EEEeccCCHHHHHHHHHHHHh
Confidence 9999842 4566666666654
No 195
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.94 E-value=6.4e-25 Score=215.05 Aligned_cols=279 Identities=15% Similarity=0.178 Sum_probs=193.9
Q ss_pred cchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh----HhhhcCcEEE
Q 046900 95 HGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD----LRWRTGIKIV 170 (442)
Q Consensus 95 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~~G~~v~ 170 (442)
....+|++++|++++ . +++++++++++++..++.+++++||+|+++.|+|..+... ++ ..|++++
T Consensus 59 ~~~~~l~~~la~~~g--------~--~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~-~~g~~~~ 127 (389)
T 3acz_A 59 PTVEQFEEMVCSIEG--------A--AGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLP-RFGIEVD 127 (389)
T ss_dssp HHHHHHHHHHHHHHT--------C--SEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHH-HTTCEEE
T ss_pred hHHHHHHHHHHHHhC--------C--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHH-HcCCEEE
Confidence 356789999999875 2 2666777778999999999999999999999999986665 45 4899999
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
.++. .|++.+++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+.+. .
T Consensus 128 ~v~~-------~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~-~ 190 (389)
T 3acz_A 128 LIDT-------SDVEKVKAAWKP------NTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL-K 190 (389)
T ss_dssp EECT-------TCHHHHHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC-C
T ss_pred EECC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc-C
Confidence 9885 378999988764 7899999999999999998 788899999999999999999876532 1
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHHHHHHHHccc-c-CCCcHHHHHHHHHHhcCchh
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRMSS-F-TLISSQTQYLLASMLSNKKF 327 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~~~-~-~~~s~~~q~~~~~~l~~~~~ 327 (442)
++ . .+..+++.|+||.++.+|.|+ ||++++++.+.+.++.... . ...++..+.++...++..
T Consensus 191 ---~~-~---------~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l-- 255 (389)
T 3acz_A 191 ---PL-E---------LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKTL-- 255 (389)
T ss_dssp ---GG-G---------TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH--
T ss_pred ---cc-c---------cCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccHH--
Confidence 11 1 145588999999999899998 9999966355555554332 2 334666666666666532
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC---------------Ceeec----CCceEEEEEecCCcccccChhhHHHHHHH
Q 046900 328 TENYIKTNRERLQKRYQMIIEGLRSAG---------------IECLK----GNAGLFCWMNLSPLLEEQTREGELALWDS 388 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~g---------------~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (442)
....+...++.+.+.+.|++.. +++.. ..++ ++.+.++. ..+ ...
T Consensus 256 -----~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~-~~~~~l~~---------~~~-~~~ 319 (389)
T 3acz_A 256 -----PIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGS-TFLFEMKS---------FEA-AKK 319 (389)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCS-EEEEEESS---------HHH-HHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCe-EEEEEECC---------HHH-HHH
Confidence 1222333445555556665531 11111 1244 55566643 122 334
Q ss_pred HHHcCcEEEeC---C------CCCCC---------------CCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 389 MLHEVKLNISP---G------SSCHC---------------SEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 389 l~~~~gi~v~p---g------~~f~~---------------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
++++.||.+.+ | ..+.. ..++++|||++. ++.++.++.|.++++
T Consensus 320 ~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---~~~~~li~~l~~al~ 387 (389)
T 3acz_A 320 LMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGI---ENVDDIIADLKQALE 387 (389)
T ss_dssp HHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHT
T ss_pred HHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 45666888776 3 22211 125799999986 357777888877764
No 196
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.94 E-value=8.7e-26 Score=225.42 Aligned_cols=297 Identities=12% Similarity=0.091 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc---C-----------CCCeEEEcCCCCcChHHhHhhh
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA---D-----------PGDALLVPTPYYPGFDRDLRWR 164 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~---~-----------~gd~Vl~~~p~y~~~~~~~~~~ 164 (442)
+.+.++++.+.+.++ ...+++|++|+|+++++..+++.+. . +||.|++.+|+|.++...+...
T Consensus 101 ~~~~~la~~la~~~~---~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~ 177 (449)
T 2cjg_A 101 VAMARFVETFARVLG---DPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSL 177 (449)
T ss_dssp HHHHHHHHHHHHHHC---CTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGT
T ss_pred HHHHHHHHHHHHhcC---CCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhh
Confidence 334444444444332 1357899999999999999987543 2 2899999999998765432211
Q ss_pred cC--------c-----EEEEEecCCCCCC--------cCCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCC-cCCCHHH
Q 046900 165 TG--------I-----KIVPIHCDSSNNF--------QITPQALEAAYKEAESKDMRVRGVLITNP-SNPLG-ATIQRSV 221 (442)
Q Consensus 165 ~G--------~-----~v~~v~~~~~~~~--------~~d~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG-~~~~~~~ 221 (442)
.| . +++.+|.++.+.. ..+++.|++.+++. +.++++| +++| +|||| .+.+.+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~v-i~ep~~~~~G~~~~~~~~ 253 (449)
T 2cjg_A 178 TNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACF-VAEPIQGEGGDRHFRPEF 253 (449)
T ss_dssp CCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEE-EECSEETTTTCEECCHHH
T ss_pred cCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEE-EEeCcCCCCCCccCCHHH
Confidence 22 2 4556665431001 24556688888642 2366654 4556 68999 5889999
Q ss_pred HHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHH-
Q 046900 222 LEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTT- 300 (442)
Q Consensus 222 l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~- 300 (442)
+++|.++|++||+++|+||+|.++.+.+. +..+..... ... +.||||.+ |+||++++ +.+.+.
T Consensus 254 l~~l~~l~~~~g~lli~DEv~~g~g~~g~-~~~~~~~~~------~~d---i~t~sK~l-----~iG~~~~~-~~~~~~l 317 (449)
T 2cjg_A 254 FAAMRELCDEFDALLIFDEVQTGCGLTGT-AWAYQQLDV------APD---IVAFGKKT-----QVCGVMAG-RRVDEVA 317 (449)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSTHHHHTC------CCS---EEEECGGG-----SSEEEEEC-GGGGGST
T ss_pred HHHHHHHHHHCCcEEEEeccccCCCccCc-ceeecccCC------Cce---EEEecCcc-----cEEEEEEC-HHHhhhh
Confidence 99999999999999999999998766654 222222211 122 23789988 79999995 455543
Q ss_pred ----HHH--ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-----C-CeeecCCceEEEEE
Q 046900 301 ----ARR--MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-----G-IECLKGNAGLFCWM 368 (442)
Q Consensus 301 ----~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g-~~~~~~~~g~~~~~ 368 (442)
+.. ....+..++++|.++.+.++.. .+ ....++++++++++.+.|++. + +....+.|. |+++
T Consensus 318 ~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~-~~~~ 391 (449)
T 2cjg_A 318 DNVFAVPSRLNSTWGGNLTDMVRARRILEVI---EA--EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGL-MCAF 391 (449)
T ss_dssp TCTTTSTTSSCCSSSSCHHHHHHHHHHHHHH---HH--HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETT-EEEE
T ss_pred hhcccCCcccccCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccE-EEEE
Confidence 111 1223556788898888877632 11 234455666677777777643 2 444555555 6677
Q ss_pred ecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 369 NLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 369 ~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+++... ...++++.|+++ ||.+.|+. .+++|++++ ..+++++++++++|++++++.
T Consensus 392 ~~~~~~------~~~~~~~~l~~~-Gv~v~~~g------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 392 SLPTTA------DRDELIRQLWQR-AVIVLPAG------ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp ECSSHH------HHHHHHHHHHHT-TEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EECChH------HHHHHHHHHHHC-CeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 886521 356788888876 99999862 478999765 238999999999999998764
No 197
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.94 E-value=1.8e-26 Score=224.77 Aligned_cols=296 Identities=17% Similarity=0.242 Sum_probs=202.7
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEE
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKI 169 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v 169 (442)
|.+..+..++|+++|++++ .+++++++|+++++..++.++ +++||.|+++.|+|..+...++. .|+++
T Consensus 32 ~~~~~~~~~l~~~la~~~~----------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~-~g~~~ 100 (373)
T 3frk_A 32 FILGDEDKKFEQEFADYCN----------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAVSY-TGAKP 100 (373)
T ss_dssp CSSSHHHHHHHHHHHHHHT----------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHHHH-HSCEE
T ss_pred ccCCchHHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHH-cCCEE
Confidence 5556788999999999986 348999999999999999999 89999999999999999998885 89999
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC-CC
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA-FS 248 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~-~~ 248 (442)
+.++++++ ++.+|+++|++.+++ ++++|+ |+||||.+.+ +++|.++|+++|+++|+|++|+... ++
T Consensus 101 ~~~~~~~~-~~~~d~~~l~~~l~~------~~~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~~ 167 (373)
T 3frk_A 101 IFVEPDIR-TYNIDPSLIESAITE------KTKAII---AVHLYGQPAD---MDEIKRIAKKYNLKLIEDAAQAHGSLYK 167 (373)
T ss_dssp EEECEETT-TTEECGGGTGGGCCT------TEEEEE---EECCTTCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEET
T ss_pred EEEecccc-ccCcCHHHHHHhcCC------CCeEEE---EECCCcCccc---HHHHHHHHHHcCCEEEEECCcccCCEEC
Confidence 99998753 578999999988764 777776 7789999887 7788888999999999999998532 22
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCc--ccCCCCCceeEEEeecCHHHHHHHHHcccc--------------CCCcH
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLS--KDLGLPGFRVGTIYSYNDKVVTTARRMSSF--------------TLISS 312 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~S--K~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--------------~~~s~ 312 (442)
+..... -..+++.||| |.++.+| +.|+++++++.+.+.++..... +.++.
T Consensus 168 ~~~~~~-------------~~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~ 233 (373)
T 3frk_A 168 GMKVGS-------------LGDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDE 233 (373)
T ss_dssp TEETTS-------------SSSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCH
T ss_pred CEeccc-------------cccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCH
Confidence 211100 0126678877 9886325 4899998777776665543321 11233
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-CCceEEEEEecCCcccccChhhHHHHHHHHHH
Q 046900 313 QTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK-GNAGLFCWMNLSPLLEEQTREGELALWDSMLH 391 (442)
Q Consensus 313 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 391 (442)
+...+....+. .+++..++.++..+++.+.|.+.++.+.. +.++...|..++-... +..++.+.|.+
T Consensus 234 ~~aa~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L~~ 301 (373)
T 3frk_A 234 LQAGFLRVKLK-------YLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRSE-----KRDELQKYLNN 301 (373)
T ss_dssp HHHHHHHHHHH-------THHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEES-----SHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEeC-----CHHHHHHHHHH
Confidence 33333222222 23444555566677777888766643321 1222222211111000 25678888877
Q ss_pred cCcEEEeCCCCCCC--------------CC-------CCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 392 EVKLNISPGSSCHC--------------SE-------PGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 392 ~~gi~v~pg~~f~~--------------~~-------~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
+ ||.++++..... .. .+.+||++. ..++++++++++.|+++..++
T Consensus 302 ~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~~ 368 (373)
T 3frk_A 302 N-GIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLEH 368 (373)
T ss_dssp T-TBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC---
T ss_pred C-CCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhhh
Confidence 6 999987641110 00 157999986 448999999999999877654
No 198
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.94 E-value=3.7e-25 Score=224.14 Aligned_cols=323 Identities=13% Similarity=0.168 Sum_probs=226.0
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC--------CC-----C-eEEEcCCCCc
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD--------PG-----D-ALLVPTPYYP 155 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~--------~g-----d-~Vl~~~p~y~ 155 (442)
.|....+...+++++.+++.+.+|. +.+++++++|+|+++++..++.++.. +| + .|+++.+.|+
T Consensus 123 ~~~~~~~~~~le~~~~~~la~~~g~--~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~ 200 (504)
T 2okj_A 123 TYEIAPVFVLMEQITLKKMREIVGW--SSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHY 200 (504)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHTC--CSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCT
T ss_pred chhhChHHHHHHHHHHHHHHHHhCC--CCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchH
Confidence 3554556678899999999988772 22277999999999999999888753 56 6 7899999999
Q ss_pred ChHHhHhhhcCc---EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc
Q 046900 156 GFDRDLRWRTGI---KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK 232 (442)
Q Consensus 156 ~~~~~~~~~~G~---~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~ 232 (442)
.+...+.. .|. +++.+|+++ ++.+|+++|++++.+...++.++++|++++|+||||.+.+ +++|+++|++|
T Consensus 201 s~~~~~~~-~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~ 274 (504)
T 2okj_A 201 SIKKAGAA-LGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKY 274 (504)
T ss_dssp HHHHHHHH-TTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHH
T ss_pred HHHHHHHH-cCCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHc
Confidence 99988885 676 899999864 5789999999999875555557899999999999999977 78888999999
Q ss_pred CcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHH-HHHccccC---
Q 046900 233 NIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTT-ARRMSSFT--- 308 (442)
Q Consensus 233 ~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~-~~~~~~~~--- 308 (442)
|+++++|++|+.+.+....+.....-.. ...+++.|++|.++.| .++|++++.++.+... +.....+.
T Consensus 275 g~~lhvD~a~~~~~~~~~~~~~~~~g~~-------~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~ 346 (504)
T 2okj_A 275 NLWLHVDAAWGGGLLMSRKHRHKLNGIE-------RANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQP 346 (504)
T ss_dssp TCEEEEEETTGGGGGGCTTTGGGGTTGG-------GCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCS
T ss_pred CCEEEEehhhhhHHHhCHhhHhhcCCcc-------cCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCC
Confidence 9999999999986654322211111001 1125677999999755 7899999966544332 22211111
Q ss_pred -------------------CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec---CCceEE
Q 046900 309 -------------------LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK---GNAGLF 365 (442)
Q Consensus 309 -------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~~~g~~ 365 (442)
...++.+.++...+. .+.+++..++..+.++++.+.|++. |+++.. |..+++
T Consensus 347 ~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v 421 (504)
T 2okj_A 347 DKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNV 421 (504)
T ss_dssp CCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCE
T ss_pred cccccCcCCcccCCCCCCCCccHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEE
Confidence 012455555555554 2345667778888899999999886 888764 677777
Q ss_pred EEEecCCcccc--cC-------hhhHHHHHHHHHHcCcE-EEeCCCCCCCCCCCEEEEEeec--CCHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEE--QT-------REGELALWDSMLHEVKL-NISPGSSCHCSEPGWFRVCFAN--MSEQTLEVALKRIHNF 433 (442)
Q Consensus 366 ~~~~~~~~~~~--~~-------~~~~~~l~~~l~~~~gi-~v~pg~~f~~~~~~~iRls~~~--~~~e~i~~~l~~l~~~ 433 (442)
++...+..... .. .....++.+.|.++ |+ .+.++. +. ...+++|+++++ .+++++++++++|+++
T Consensus 422 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~-~~-~~~~~lRis~~~~~~t~edi~~~~~~l~~~ 498 (504)
T 2okj_A 422 CFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVGYQP-QG-DKANFFRMVISNPAATQSDIDFLIEEIERL 498 (504)
T ss_dssp EEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHH-TSCEEEEEE-ET-TEEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEeCccccccccchhhHHHHHHHHHHHHHHHHhC-CcEEEEeeE-EC-CceEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 66544431100 00 00135678888887 75 444322 32 123689999971 2899999999999988
Q ss_pred HHH
Q 046900 434 MQK 436 (442)
Q Consensus 434 l~~ 436 (442)
+++
T Consensus 499 ~~~ 501 (504)
T 2okj_A 499 GQD 501 (504)
T ss_dssp HTC
T ss_pred HHH
Confidence 754
No 199
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.94 E-value=1.8e-25 Score=220.85 Aligned_cols=281 Identities=18% Similarity=0.169 Sum_probs=191.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH----hHhhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR----DLRWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~G~~v~~ 171 (442)
...+|++.+|++++ .+..++++++++++..++.+++++||.|+++.|+|..+.. .+. ..|++++.
T Consensus 83 ~~~~le~~lA~l~g----------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~-~~G~~~~~ 151 (430)
T 3ri6_A 83 TVEDLEQRLKNLTG----------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLP-SFGIEVRF 151 (430)
T ss_dssp HHHHHHHHHHHHHT----------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHH-HTTCEEEE
T ss_pred HHHHHHHHHHHHHC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHH-HcCCEEEE
Confidence 45778888888764 2345666677899999999999999999999999988776 455 48999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++.+ |++.|++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+...+..
T Consensus 152 v~~~-------d~~~l~~ai~~------~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~~-- 213 (430)
T 3ri6_A 152 VDVM-------DSLAVEHACDE------TTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLLE-- 213 (430)
T ss_dssp ECTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTCC--
T ss_pred eCCC-------CHHHHHHhhCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC--
Confidence 9864 78999998864 8899999999999999998 7788899999999999999998644311
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEee--cCHHH------------------HHHHHH-c-ccc-C
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYS--YNDKV------------------VTTARR-M-SSF-T 308 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~--~~~~~------------------~~~~~~-~-~~~-~ 308 (442)
+ .. .+..+++.|+||.+|.+|..+|.+++ .+..+ ....+. . ... .
T Consensus 214 --~-~~---------~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~ 281 (430)
T 3ri6_A 214 --A-KR---------LGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGP 281 (430)
T ss_dssp --G-GG---------GTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCC
T ss_pred --h-HH---------cCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCC
Confidence 1 11 13458899999999866655555544 22111 111111 1 112 2
Q ss_pred CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eecCC----------------ceEEEEEec
Q 046900 309 LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIE-CLKGN----------------AGLFCWMNL 370 (442)
Q Consensus 309 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~g~~~~~~~ 370 (442)
.+++...+.+...+ +.+....++..++...+.+.|++. +++ +..|. ||+.+|+++
T Consensus 282 ~~~~~~a~l~l~~l-------~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l 354 (430)
T 3ri6_A 282 SLSPHNAYLQSLGL-------ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFEL 354 (430)
T ss_dssp CCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEC
T ss_pred CCCHHHHHHHHhhh-------hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEE
Confidence 23443333222222 223444556677888888999876 555 33333 666899998
Q ss_pred CCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC---------------------CCCCEEEEEeecCCHHHHHHHHHH
Q 046900 371 SPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC---------------------SEPGWFRVCFANMSEQTLEVALKR 429 (442)
Q Consensus 371 ~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~---------------------~~~~~iRls~~~~~~e~i~~~l~~ 429 (442)
+.. .++.++.+.+ +..++.+.+|..+.. ..+++||||++. |+.+.+++.
T Consensus 355 ~~~------~~~~~~~~~l-~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~---E~~~dl~~d 424 (430)
T 3ri6_A 355 ESK------EASYRFMDAL-KLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI---EEIEDLKED 424 (430)
T ss_dssp SSH------HHHHHHHHHC-SSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS---SCHHHHHHH
T ss_pred CCH------HHHHHHHHhC-CcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHH
Confidence 732 2356666665 333777788876651 235789999986 445666666
Q ss_pred HHHHH
Q 046900 430 IHNFM 434 (442)
Q Consensus 430 l~~~l 434 (442)
|++++
T Consensus 425 l~~al 429 (430)
T 3ri6_A 425 ILQAL 429 (430)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 66654
No 200
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.94 E-value=9.6e-25 Score=220.19 Aligned_cols=321 Identities=14% Similarity=0.125 Sum_probs=222.5
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCcc-----CCCcEEEecChHHHHHHHHHhhcCC---------CC----------
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKF-----DLNRIVVTAGATAANELLTFILADP---------GD---------- 145 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-----~~~~i~~t~G~~~ai~~~~~~l~~~---------gd---------- 145 (442)
.|....+..++++++++++.+.+|..... ...++++|+|+|+++..++.++.++ ||
T Consensus 104 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~ 183 (486)
T 1js3_A 104 SWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKL 183 (486)
T ss_dssp SGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHE
T ss_pred ccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCE
Confidence 45555668899999999999988732110 1357899999999999888765321 42
Q ss_pred eEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHH
Q 046900 146 ALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEEL 225 (442)
Q Consensus 146 ~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l 225 (442)
.|+++.++|+.+...++. .|++++.+|+++ ++.+|+++|++++++..+.+..+.+|++++|+||||.+-+ +++|
T Consensus 184 ~v~~s~~~h~s~~~~~~~-~G~~v~~v~~d~--~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~---l~~I 257 (486)
T 1js3_A 184 VAYASDQAHSSVERAGLI-GGVKLKAIPSDG--KFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN---LLEV 257 (486)
T ss_dssp EEEEETTCCHHHHHHHHH-HTCEEEEECCCT--TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHH
T ss_pred EEEECCCCcHHHHHHHHh-CCCceEEeecCC--CCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCC---HHHH
Confidence 378899999999999985 899999999863 6789999999999875444444568899999999998855 8889
Q ss_pred HHHHHhcCcEEEEeccCCcCCCCCCCcccH-HHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHH-HHHHHH
Q 046900 226 LDFATRKNIHLVSDEIYSGSAFSSSEFVSI-AEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKV-VTTARR 303 (442)
Q Consensus 226 ~~~~~~~~~~vi~De~y~~~~~~~~~~~s~-~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~-~~~~~~ 303 (442)
+++|++||+++++|++|+.+.+..+.+... ..+ .. -+ .++.|+||.++.| +++||++++++.. .+.+..
T Consensus 258 ~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~-~~-----ad--si~~~~hK~~~~p-~~~G~l~~~~~~~l~~~~~~ 328 (486)
T 1js3_A 258 GPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGV-EF-----AD--SFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAFKL 328 (486)
T ss_dssp HHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTG-GG-----CS--EEEECHHHHSSCC-SSCEEEEESCHHHHHGGGC-
T ss_pred HHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCc-cc-----cC--eeEEchhhhcCCC-cceEEEEEeCHHHHHHHhcC
Confidence 999999999999999999755432222221 111 11 12 3457899999755 8999999976653 322210
Q ss_pred cccc--------------------C--CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec-
Q 046900 304 MSSF--------------------T--LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK- 359 (442)
Q Consensus 304 ~~~~--------------------~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~- 359 (442)
...+ . ....+.+.++...+. .+.+++..+++.++++++.+.|++. |+++..
T Consensus 329 ~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 403 (486)
T 1js3_A 329 DPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG-----VKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAE 403 (486)
T ss_dssp -----------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSC
T ss_pred CchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC
Confidence 0000 0 112345555544442 2346677788888899999999887 888764
Q ss_pred CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec--CCHHHHHHHHHHHHHHHHHH
Q 046900 360 GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN--MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 360 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~--~~~e~i~~~l~~l~~~l~~~ 437 (442)
|..+++.| .++... ....++.+.|.++ |+.+.++..|. +.+++|+++.. .+++++++++++|++++++.
T Consensus 404 ~~~~~v~f-~~~~~~-----~~~~~l~~~L~~~-g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~ 474 (486)
T 1js3_A 404 VTLGLVCF-RLKGSD-----GLNEALLERINSA-RKIHLVPCRLR--GQFVLRFAICSRKVESGHVRLAWEHIRGLAAEL 474 (486)
T ss_dssp CCSSEEEE-EESSCH-----HHHHHHHHHHHHH-TSCBCEEEEET--TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CceeEEEE-EecChH-----HHHHHHHHHHHhc-CCEEEEEEEEC--CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 66665554 444210 1246788888777 75443333332 35789999863 27889999999999998776
Q ss_pred Hh
Q 046900 438 ER 439 (442)
Q Consensus 438 ~~ 439 (442)
.+
T Consensus 475 ~~ 476 (486)
T 1js3_A 475 LA 476 (486)
T ss_dssp HC
T ss_pred Hh
Confidence 54
No 201
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.93 E-value=5.9e-25 Score=222.13 Aligned_cols=317 Identities=12% Similarity=0.066 Sum_probs=219.8
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEE---EecChHHHHHHHHHhhcCC--------CC-----eEEEcCCCC
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIV---VTAGATAANELLTFILADP--------GD-----ALLVPTPYY 154 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~---~t~G~~~ai~~~~~~l~~~--------gd-----~Vl~~~p~y 154 (442)
|..+.+..++++.+.+++.+.+|. +.+++++. +|+|+++++.+++.++..+ |+ .|+++.++|
T Consensus 87 ~~~~p~~~~le~~~~~~la~l~g~--~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h 164 (502)
T 3hbx_A 87 MDEYPVTTELQNRCVNMIAHLFNA--PLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQ 164 (502)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTTC--CCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCC
T ss_pred hhcChhHHHHHHHHHHHHHHHhCC--CcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCch
Confidence 334456788999999999988772 22255544 4999999999998887655 76 899999999
Q ss_pred cChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc--
Q 046900 155 PGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK-- 232 (442)
Q Consensus 155 ~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~-- 232 (442)
..+...++. .|++++.+|+++ +++.+|+++|++++.+ ++++|++++|+||||.+.+ +++|.++|+++
T Consensus 165 ~s~~~~~~~-~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~ 233 (502)
T 3hbx_A 165 VCWEKFARY-FEVELKEVKLSE-GYYVMDPQQAVDMVDE------NTICVAAILGSTLNGEFED---VKLLNDLLVEKNK 233 (502)
T ss_dssp HHHHHHHHH-TTCEEEEECCBT-TBCSCCHHHHHHHCCT------TEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCceeEEEecCC-CcCcCCHHHHHHHHhh------CCEEEEEecCCCCCCcccC---HHHHHHHHHHhhh
Confidence 999999985 999999999875 3478999999999875 7889999999999999988 67778888888
Q ss_pred ----CcEEEEeccCCcCCC---CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHH-HHHHHc
Q 046900 233 ----NIHLVSDEIYSGSAF---SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVV-TTARRM 304 (442)
Q Consensus 233 ----~~~vi~De~y~~~~~---~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~-~~~~~~ 304 (442)
++++++|++|+.+.. .+.....+. ..+-..+..|.+|.++ ++.++||+++.++... ..+...
T Consensus 234 ~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~---------~~~~D~v~~s~hK~l~-~p~g~G~~~~~~~~~l~~~~~~~ 303 (502)
T 3hbx_A 234 ETGWDTPIHVDAASGGFIAPFLYPELEWDFR---------LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFH 303 (502)
T ss_dssp HHCCCCCEEEECTTGGGTHHHHCTTCCCSTT---------STTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGCEE
T ss_pred ccCCCCeEEEECCccchhhhhhCcccccccC---------CCCceEEEECcccccC-CCCCeEEEEEeCHHHhhHHhccC
Confidence 999999999986541 111111110 0133455678999774 7788999888654432 221111
Q ss_pred ccc-----------CC---CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecC-CceEEEEE
Q 046900 305 SSF-----------TL---ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG-IECLKG-NAGLFCWM 368 (442)
Q Consensus 305 ~~~-----------~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~g~~~~~ 368 (442)
..+ +. .....+.++...+.. +.+.+..++..+.++++.+.|++.+ +++..+ ....++.+
T Consensus 304 ~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (502)
T 3hbx_A 304 INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGH-----EGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAF 378 (502)
T ss_dssp ECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEE
T ss_pred cccccCCCCCccccCCchHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEE
Confidence 111 00 122334444444332 2345667777788889999999885 888765 33346666
Q ss_pred ecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCC-CCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHhh
Q 046900 369 NLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCH-CSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRERR 440 (442)
Q Consensus 369 ~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~-~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~~ 440 (442)
.++.... .+..++.+.|.++ ||.+....... ..+..++|++++ ..++++++.+++.|+++++..++.
T Consensus 379 ~~~~~~~----~~~~~l~~~L~~~-Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~~ 447 (502)
T 3hbx_A 379 SLKDSSC----HTEFEISDMLRRY-GWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDEL 447 (502)
T ss_dssp EESSCSS----CCHHHHHHHHHTT-TCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EecCCCc----CCHHHHHHHHHhC-CcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 7654211 1245788888666 99875432211 123468999997 337999999999999999876553
No 202
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.93 E-value=7.6e-25 Score=218.99 Aligned_cols=301 Identities=10% Similarity=0.066 Sum_probs=207.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChH-HHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhhcCcEEEEEe
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGAT-AANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGIKIVPIH 173 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~-~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~ 173 (442)
..++.+++.+++.+.+| ++++ +++|+|++ .++.+++.++.. +|+.|+++.+.|+.+...++. .|++++.++
T Consensus 131 ~~~~~~~~~~~la~~~g----~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~-~G~~~~~v~ 204 (456)
T 2z67_A 131 MYALTNKILESFFKQLG----LNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSF-VGMNMRLVE 204 (456)
T ss_dssp HHHHHHHHHHHHHHHTT----CCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH-TTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHcC----CCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHH-cCCCceEEE
Confidence 56677777788777766 4445 99999999 455545555433 678899999999999998885 899999988
Q ss_pred cCC-CCCCcCCHHHHHHHH-HHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 174 CDS-SNNFQITPQALEAAY-KEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 174 ~~~-~~~~~~d~~~l~~~l-~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
+.+ +.++.+|+++|++++ ++.. ..++.+|++++|+||||.+.+ +++|.++|+++|+++++|++|+.+.++
T Consensus 205 ~~~~~~~~~~d~~~l~~~i~~~~~--~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g--- 276 (456)
T 2z67_A 205 TVLDGDRVYVPVEDIENAIKKEIE--LGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNY--- 276 (456)
T ss_dssp CEEETTEEECCHHHHHHHHHHHHH--TTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHH---
T ss_pred EeccCCCCCcCHHHHHHHHHHHhh--CCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHH---
Confidence 732 245789999999999 4211 126677888999999999987 778888899999999999999865431
Q ss_pred cccH-HHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCC-Cc-HHHHHHHHHHhcCchhH
Q 046900 252 FVSI-AEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTL-IS-SQTQYLLASMLSNKKFT 328 (442)
Q Consensus 252 ~~s~-~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~-~s-~~~q~~~~~~l~~~~~~ 328 (442)
..+. ...... ..-+++.|++|.++ +++++||++++++.+.+.+......+. .+ .+.+.++...+.
T Consensus 277 ~~~~~~~~~~~------~~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~----- 344 (456)
T 2z67_A 277 YLEKLKKAFKY------RVDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG----- 344 (456)
T ss_dssp HHHHHHHHHTS------CCSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH-----
T ss_pred hhHHHHHhhCC------CCCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH-----
Confidence 1111 111110 11246789999765 678999999966666555533221111 11 334444443332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCceEEEEEec--CCcccccChhhHHHHHHHHHHcCcE---EEe-
Q 046900 329 ENYIKTNRERLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNL--SPLLEEQTREGELALWDSMLHEVKL---NIS- 398 (442)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~gi---~v~- 398 (442)
.+.+++..+.+.++++++.+.|++. |+.+.+++ + ++++.+ +.. ..++.+.|.++ || .+.
T Consensus 345 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~-~-~v~~~~~~~~~--------~~~l~~~L~~~-gi~~~rv~~ 413 (456)
T 2z67_A 345 SKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE-S-PIASCISVNSD--------PVEIAAKLYNL-RVTGPRGIK 413 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC-C-SSEEEEECSSC--------HHHHHHHHHHT-TEESCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC-C-eEEEEEecccH--------HHHHHHHHHHc-CCCcceEEe
Confidence 2346677888889999999999876 87777776 4 555665 321 35677788776 65 343
Q ss_pred -----CCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 399 -----PGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 399 -----pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
+|..|.....+++|++++ ..+++++++++++|++++
T Consensus 414 ~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 414 KTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp TTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred ecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 244443333579999988 338999999999998754
No 203
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.93 E-value=7.6e-24 Score=206.74 Aligned_cols=302 Identities=11% Similarity=0.115 Sum_probs=210.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH--HhHhhhcC--cEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD--RDLRWRTG--IKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~~G--~~v~~v 172 (442)
..++.+++++.+.+.++ .+ +.|++|+|+++++..++..+ .+||+|++..++|..+. ..+. ..| .+++.+
T Consensus 33 ~~~~~~~~~~~l~~~~~----~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~-~~g~~~~~~~~ 105 (379)
T 3ke3_A 33 FQEVMNDLLSNLKTVYN----AE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILE-KGKFAKSSTVL 105 (379)
T ss_dssp HHHHHHHHHHHHHHHHT----CS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHH-HHCCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHhC----CC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHH-HhCCCCceEEE
Confidence 34666667777766655 33 67999999999999988655 69999999999987643 2333 245 477888
Q ss_pred ecCCCC------CC-cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 173 HCDSSN------NF-QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 173 ~~~~~~------~~-~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
+.+..+ .| .+|++++++.+++. ++++|+++.++||||.+++.+.+++|.++|++||+++|+|++++ .
T Consensus 106 ~~~~~g~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g 179 (379)
T 3ke3_A 106 TAERTEDTEAPKPFAPVDIETAVAKIKED-----KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G 179 (379)
T ss_dssp ECEESSCCSSCCCEECCCHHHHHHHHHHH-----TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T
T ss_pred eccccccccccCCCCCCCHHHHHHHHhhc-----CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C
Confidence 764311 12 47999999999642 67889999999999999999999999999999999999999986 2
Q ss_pred CCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc--c-----------------
Q 046900 246 AFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS--S----------------- 306 (442)
Q Consensus 246 ~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--~----------------- 306 (442)
+ ....+... +..+++.|++|.++ .+.++|++++ ++.+.+.+.... .
T Consensus 180 ---~-~~~~~~~~---------~~d~~~~s~~K~l~-~~~g~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 244 (379)
T 3ke3_A 180 ---C-VWLDMKEL---------GIDVLISAPQKGWS-STPCAGLVML-SAAAIKKVESTESNCFSLDLKQWLTIMRAYEN 244 (379)
T ss_dssp ---T-CCCCHHHH---------TCSEEEECTTTTTC-SCCCEEEEEE-CHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHT
T ss_pred ---C-cccccccc---------CCCEEEecchhhcC-CCCceEEEEE-CHHHHHhhhcCCCCceeecHHHHHHHHHhhhc
Confidence 2 22333333 23477889999986 4446899998 455555544211 0
Q ss_pred ----c-CCCcHHHHHHHHHHhcCchhHHHH-HHHHHHHHHHHHHHHHHHHHhCCCeeecCC---ceEEEEEecCCccccc
Q 046900 307 ----F-TLISSQTQYLLASMLSNKKFTENY-IKTNRERLQKRYQMIIEGLRSAGIECLKGN---AGLFCWMNLSPLLEEQ 377 (442)
Q Consensus 307 ----~-~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~g~~~~~~~~~~~~~~ 377 (442)
+ ++.+...+.++.+.++ ++.+. +++.+++++++++++.+.|++.|+++..+. ++....+..+.
T Consensus 245 g~~~~~~t~~~~~~~a~~aal~---~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~----- 316 (379)
T 3ke3_A 245 GGHAYHATMPTDSLRQFRDAIL---EAKEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTER----- 316 (379)
T ss_dssp TSCCCSSCCCHHHHHHHHHHHH---HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECSC-----
T ss_pred cCCCCCCCCCHHHHHHHHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccCC-----
Confidence 1 1345555555555554 22222 567788888999999999999888876543 23233333332
Q ss_pred ChhhHHHHHHHHHHcCcEEEeCCCCCCC---CCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 378 TREGELALWDSMLHEVKLNISPGSSCHC---SEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 378 ~~~~~~~l~~~l~~~~gi~v~pg~~f~~---~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
....+...|.++ ||.+.+|..+.. ...+.+|+++. ..+++++++++++|++++++..
T Consensus 317 ---~~~~~~~~L~~~-Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 317 ---DDMHKGSAFAEA-GLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp ---HHHHSSHHHHHT-TCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred ---cchHHHHHHHHC-CeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 112234555454 999999986542 22578999986 2278999999999999998764
No 204
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.93 E-value=2.4e-26 Score=228.98 Aligned_cols=287 Identities=12% Similarity=0.029 Sum_probs=189.7
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEE
Q 046900 93 DYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPI 172 (442)
Q Consensus 93 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v 172 (442)
+.....++++.+|+ ++ .+ +++++|+|+++++.+++.+++++||.|+++.|+|..+...+.. .|++++.+
T Consensus 55 ~~~~~~~~~~~la~-~g--------~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~-~G~~~~~v 123 (446)
T 2x3l_A 55 PEEVILKSMKQVEK-HS--------DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDI-SQQEGHFI 123 (446)
T ss_dssp CSSHHHHHHHHHCS-CT--------TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHH-HTCCEEEC
T ss_pred cchHHHHHHHHHHh-cC--------CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHH-cCCeEEEE
Confidence 34456788888887 64 23 6899999999999999999999999999999999999998885 89999999
Q ss_pred ec--CCCCC--CcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCc-CCC
Q 046900 173 HC--DSSNN--FQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSG-SAF 247 (442)
Q Consensus 173 ~~--~~~~~--~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~-~~~ 247 (442)
+. +++.+ +.+|++.| +. .+++++++++ .|+||.+++ +++|+++|++||+++|+||+|+. +.|
T Consensus 124 ~~~~~~~~~~~~~~d~~~l---~~------~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f 190 (446)
T 2x3l_A 124 ETHQSPLTNHYNKVNLSRL---NN------DGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGL 190 (446)
T ss_dssp EEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTS
T ss_pred eCeeccccCcCCCCCHHHH---cC------CCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhcc
Confidence 88 43211 46778877 22 2788999999 555999998 77889999999999999999986 334
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHH-HHHHHc---cccCCCcHHHHHHHHHHhc
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVV-TTARRM---SSFTLISSQTQYLLASMLS 323 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~-~~~~~~---~~~~~~s~~~q~~~~~~l~ 323 (442)
.+. ..+.... +..+++.|+||.++ ++.++||++++++.+. ..+... ...+..+.....++...++
T Consensus 191 ~~~-~~~~~~~---------g~Di~~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~ 259 (446)
T 2x3l_A 191 QGF-PDSTLNY---------QADYVVQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQ 259 (446)
T ss_dssp TTS-CCCGGGG---------TCSEEEECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHH
T ss_pred CCC-CCChHHc---------CCCEEEECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Confidence 443 2232222 12278899999654 4445899999655332 122211 1122233332222222221
Q ss_pred CchhHHHH-HHHHHHHHHHHHHHHHHHHHhCCCeeecCCceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEe-CCC
Q 046900 324 NKKFTENY-IKTNRERLQKRYQMIIEGLRSAGIECLKGNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNIS-PGS 401 (442)
Q Consensus 324 ~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~-pg~ 401 (442)
++.+. .++..++.++.++.+.+. |+++..+..+.++|+.++.. +..++.+.|.++ ||.+. +|
T Consensus 260 ---~l~~~g~~~~~~~~~~l~~~l~~~----g~~~~~~~~~~~l~i~~~~~-------~~~~l~~~L~~~-GI~v~~~g- 323 (446)
T 2x3l_A 260 ---FYKTYDSTLFFAKRAQLIECLENK----GFEMLQVDDPLKLLIKYEGF-------TGHDIQNWFMNA-HIYLELAD- 323 (446)
T ss_dssp ---HHHHCCCHHHHHHHHHHHHHHHHH----TCEEEECSSTTEEEEECTTS-------CHHHHHHHHHHT-TEEESEEC-
T ss_pred ---HHHHhCHHHHHHHHHHHHHHHHHc----CCEECcCCCCeEEEEEeCCc-------CHHHHHHHHHHC-CCEEEecC-
Confidence 11111 011233333333333333 78877665556789988721 256788888777 99997 43
Q ss_pred CCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHH
Q 046900 402 SCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 402 ~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~ 437 (442)
.+++|++++. .+++++ +++++|+++++..
T Consensus 324 ------~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 324 ------DYQALAILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp ------SSCEEEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred ------CCEEEEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 2579999973 277889 9999999887644
No 205
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.93 E-value=4.9e-24 Score=215.78 Aligned_cols=325 Identities=13% Similarity=0.155 Sum_probs=225.9
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcC--------------CCCeEEEcCCCC
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILAD--------------PGDALLVPTPYY 154 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~--------------~gd~Vl~~~p~y 154 (442)
..|....+..++++++++|+.+.+|. +.+++.+++|+|+++++..++.++.+ +++.|+++.++|
T Consensus 125 ~~~~~~p~~~~le~~~~~~l~~~~g~--~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H 202 (511)
T 3vp6_A 125 FTYEIAPVFVLMEQITLKKMREIVGW--SSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSH 202 (511)
T ss_dssp SCTTTCHHHHHHHHHHHHHHHHHHTC--CSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSC
T ss_pred CCcccCchHHHHHHHHHHHHHHHhCC--CCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCch
Confidence 45766778899999999999999873 23357899999999999988777654 567899999999
Q ss_pred cChHHhHhhhcCc---EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHh
Q 046900 155 PGFDRDLRWRTGI---KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATR 231 (442)
Q Consensus 155 ~~~~~~~~~~~G~---~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~ 231 (442)
..+...++. .|+ +++.++.++ ++.+|+++|++++++...++..+++|++++|+||||.+-+ +++|+++|++
T Consensus 203 ~s~~~~~~~-~g~g~~~~~~v~~d~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~---l~~I~~ia~~ 276 (511)
T 3vp6_A 203 YSIKKAGAA-LGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEK 276 (511)
T ss_dssp THHHHHHHH-TTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC---HHHHHHHHHH
T ss_pred HHHHHHHHH-cCCCCCcEEEeecCC--CCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc---HHHHHHHHHH
Confidence 999999985 888 899999875 4789999999999876555556899999999999999965 8899999999
Q ss_pred cCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHH-HHccccC--
Q 046900 232 KNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTA-RRMSSFT-- 308 (442)
Q Consensus 232 ~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~-~~~~~~~-- 308 (442)
||+++++|++|+...+..+.+.....-.. .-..++.+++|.++.| ..+|++++.++.+.... .....+.
T Consensus 277 ~~~~lhvD~a~~~~~~~~~~~~~~~~g~~-------~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~ 348 (511)
T 3vp6_A 277 YNLWLHVDAAWGGGLLMSRKHRHKLNGIE-------RANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQ 348 (511)
T ss_dssp HTCEEEEEETTGGGGGGCTTTGGGGTTGG-------GCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCC
T ss_pred cCCEEEEEccchhhHhhChhhhhhccCCc-------cCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCccccC
Confidence 99999999999975543322211110000 1124567999998744 67899988666544332 2111110
Q ss_pred --------------------CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec---CCceE
Q 046900 309 --------------------LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK---GNAGL 364 (442)
Q Consensus 309 --------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~~~g~ 364 (442)
....+...++...+. .+.++++.++..++.+++.+.|++. |+++.. |..++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g-----~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~ 423 (511)
T 3vp6_A 349 QDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTN 423 (511)
T ss_dssp SSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSC
T ss_pred cccccccccCccCCCCCCCCchHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEE
Confidence 011233333333332 3456778888888999999999887 888765 56665
Q ss_pred EEEEecCCccccc--Ch-------hhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee--cCCHHHHHHHHHHHHHH
Q 046900 365 FCWMNLSPLLEEQ--TR-------EGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA--NMSEQTLEVALKRIHNF 433 (442)
Q Consensus 365 ~~~~~~~~~~~~~--~~-------~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~e~i~~~l~~l~~~ 433 (442)
++|.-.|...... .. ....++.+.|.++ |+.+.. ..+...+.+++|++++ ..++++++.+++.|+++
T Consensus 424 v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-G~~~~~-~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~ 501 (511)
T 3vp6_A 424 VCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVG-YQPQGDKANFFRMVISNPAATQSDIDFLIEEIERL 501 (511)
T ss_dssp EEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHH-TSCEEE-EEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhc-CCEEEE-EEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 5543334322110 00 0134678888888 754433 1121122357999984 23789999999999887
Q ss_pred HHH
Q 046900 434 MQK 436 (442)
Q Consensus 434 l~~ 436 (442)
-+.
T Consensus 502 ~~~ 504 (511)
T 3vp6_A 502 GQD 504 (511)
T ss_dssp HC-
T ss_pred HHh
Confidence 654
No 206
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.93 E-value=4.6e-24 Score=212.31 Aligned_cols=293 Identities=13% Similarity=0.174 Sum_probs=200.9
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh---------cCCCCeEEEcCCCCcChHHhH
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL---------ADPGDALLVPTPYYPGFDRDL 161 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l---------~~~gd~Vl~~~p~y~~~~~~~ 161 (442)
|.+..+..++|+++|++++ . +++++++++++++.+++.++ +++||.|+++.|+|+.+...+
T Consensus 58 ~~~~~~~~~l~~~la~~~g--------~--~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~ 127 (437)
T 3bb8_A 58 LTTGRFNDAFEKKLGEYLG--------V--PYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT 127 (437)
T ss_dssp CBSCHHHHHHHHHHHHHHT--------C--SEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH
T ss_pred cCCChHHHHHHHHHHHHHC--------C--CcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHH
Confidence 3344578999999999986 2 26778888889999999988 789999999999999999988
Q ss_pred hhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 162 RWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITN-PSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 162 ~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~-P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
.. .|++++.++++++ ++.+|++.|++.+++ ++++|++++ |+|| .+ +++|.++|+++|+++|+|+
T Consensus 128 ~~-~g~~~~~v~~~~~-~~~~d~~~l~~~i~~------~~~~v~~~~~~g~~----~~---~~~i~~l~~~~~~~li~D~ 192 (437)
T 3bb8_A 128 IQ-NGLIPVFVDVDIP-TYNVNASLIEAAVSD------KTKAIMIAHTLGNL----FD---LAEVRRVADKYNLWLIEDC 192 (437)
T ss_dssp HH-TTCEEEECCEETT-TTEECGGGHHHHCCT------TEEEEEEECGGGCC----CC---HHHHHHHHHHHTCEEEEEC
T ss_pred HH-cCCEEEEEeccCc-cCCcCHHHHHHhcCC------CCeEEEEeCCCCCh----hc---HHHHHHHHHHcCCEEEEEC
Confidence 85 8999999998753 578999999998864 789999984 5555 34 8888999999999999999
Q ss_pred cCCcCC-CCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcccc------------
Q 046900 241 IYSGSA-FSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF------------ 307 (442)
Q Consensus 241 ~y~~~~-~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~------------ 307 (442)
+|+... +++. . +.. ... +++.||+|..+++|.|+||++++++.+...++.....
T Consensus 193 a~~~g~~~~~~---~---~~~------~~d-~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (437)
T 3bb8_A 193 CDALGSTYDGK---M---AGT------FGD-IGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDN 259 (437)
T ss_dssp TTCTTCEETTE---E---TTS------SSS-EEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC--------
T ss_pred ccccCceECCe---e---ccc------ccC-EEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCccccccccccc
Confidence 998432 2111 1 110 112 5678998888889999999999766666543321100
Q ss_pred -----------------------------CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 046900 308 -----------------------------TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIEC 357 (442)
Q Consensus 308 -----------------------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 357 (442)
..++.+.+.++...++. +.+..++.++.++++.+.|++. |+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~-------~~~~~~~~~~~~~~l~~~L~~~~g~~~ 332 (437)
T 3bb8_A 260 TCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER-------IEEFVEKRKANFKYLKDALQSCADFIE 332 (437)
T ss_dssp --------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHGGGGTTTEE
T ss_pred ccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhhccCCccc
Confidence 01234444444333321 1223333356677888888876 6554
Q ss_pred ecCC--------ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC--CC--------------------
Q 046900 358 LKGN--------AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC--SE-------------------- 407 (442)
Q Consensus 358 ~~~~--------~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~--~~-------------------- 407 (442)
.+.. ..+.+.++.+... +..++.+.|.++ ||.++++..... ..
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~~-GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 405 (437)
T 3bb8_A 333 LPEATENSDPSWFGFPITLKEDSGV------SRIDLVKFLDEA-KVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIM 405 (437)
T ss_dssp CCCCCTTEECCCSSEEEEECGGGSS------CHHHHHHHHHHT-TBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHH
T ss_pred cCCCCCCCceeeEEEEEEECCcCcC------cHHHHHHHHHHC-CCceeccCCcccccCchhhccCccccCCCcHHHHHh
Confidence 4311 1223334443111 256788888776 999998754110 00
Q ss_pred CCEEEEEee-cCCHHHHHHHHHHHHHHHH
Q 046900 408 PGWFRVCFA-NMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 408 ~~~iRls~~-~~~~e~i~~~l~~l~~~l~ 435 (442)
.+.+||++. .+++++++++++.|+++++
T Consensus 406 ~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 406 NQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred cCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 124899886 4489999999999988764
No 207
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.92 E-value=6.1e-24 Score=214.83 Aligned_cols=317 Identities=12% Similarity=0.156 Sum_probs=217.0
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCC-CcEEEecChHHHHHHHHHhh----c---------CC------CC-eEE
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDL-NRIVVTAGATAANELLTFIL----A---------DP------GD-ALL 148 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~i~~t~G~~~ai~~~~~~l----~---------~~------gd-~Vl 148 (442)
.|....+..++++++.+++.+.+| +++ +++++|+|+++++..++.++ + .+ |+ .|+
T Consensus 131 ~~~~~~~~~~le~~~~~~la~~~g----~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~ 206 (497)
T 2qma_A 131 SWDQASSATYVEQKVVNWLCDKYD----LSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIV 206 (497)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHTT----CCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEE
T ss_pred chhhChHHHHHHHHHHHHHHHHhC----CCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEE
Confidence 354445678899998999988876 334 78999999999999988773 2 12 46 799
Q ss_pred EcCCCCcChHHhHhhhcCc---EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHH
Q 046900 149 VPTPYYPGFDRDLRWRTGI---KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEEL 225 (442)
Q Consensus 149 ~~~p~y~~~~~~~~~~~G~---~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l 225 (442)
++.+.|..+...+.. .|. +++.+|+++ ++.+|+++|++.+++....+.++.+|++++|+||||.+.+ +++|
T Consensus 207 ~s~~~h~s~~~~~~~-~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~---l~~I 280 (497)
T 2qma_A 207 CSKKSHFTVQKSASW-MGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD---LDFI 280 (497)
T ss_dssp EETTSCTHHHHHHHH-TTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHH
T ss_pred ECCCchHHHHHHHHH-cCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC---HHHH
Confidence 999999999888874 766 799999864 5789999999999864333333457888999999999877 7888
Q ss_pred HHHHHhcCcEEEEeccCCcCCCCCCCccc-HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHc
Q 046900 226 LDFATRKNIHLVSDEIYSGSAFSSSEFVS-IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM 304 (442)
Q Consensus 226 ~~~~~~~~~~vi~De~y~~~~~~~~~~~s-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~ 304 (442)
+++|++||+++++|++|+.+.+... +.. +..+ . ...+++.|+||.++.| .++|++++.++...+.+...
T Consensus 281 ~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi-~-------~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~ 350 (497)
T 2qma_A 281 ADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGV-E-------RAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHH 350 (497)
T ss_dssp HHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTG-G-------GCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC-
T ss_pred HHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCc-c-------cCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCC
Confidence 8999999999999999997665332 111 1111 1 1125677999998755 79999998665533222111
Q ss_pred cccC-C-----C-------------cHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee-cCCce
Q 046900 305 SSFT-L-----I-------------SSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECL-KGNAG 363 (442)
Q Consensus 305 ~~~~-~-----~-------------s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~g 363 (442)
..+. . . ..+.+.++...+. .+.+++..+++.++++++.+.|++. ++++. ++.++
T Consensus 351 ~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 425 (497)
T 2qma_A 351 ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVG-----PKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLS 425 (497)
T ss_dssp -------------------CCSCCCTHHHHHHHHHHTC-----HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSS
T ss_pred chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCce
Confidence 1110 0 0 1222333333332 2345667777888999999999986 88874 45666
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee--cCCHHHHHHHHHHHHHHHHH
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA--NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~e~i~~~l~~l~~~l~~ 436 (442)
++++.+..... ....-..++.+.+.++ |+.+.++..+. +.+++|+++. ..+++++++++++|++++++
T Consensus 426 -~v~f~~~~~~~-~~~~l~~~l~~~l~~~-G~~~~~~~~~~--g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 426 -TVLFRATHETA-DLDELNKALRLEALTR-GIAVLGETIVD--GKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp -EEEEEECCSSS-CHHHHHHHHHHHHHHH-TSCBCEEEEET--TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -EEEEEEcCCcc-CHHHHHHHHHHHHHhC-CCEEEEeeEEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 55566643210 0000134566777777 98887654442 3468999983 33899999999999998765
No 208
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.92 E-value=1.5e-23 Score=205.50 Aligned_cols=283 Identities=15% Similarity=0.152 Sum_probs=191.5
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh----hcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW----RTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~~G~~v~~ 171 (442)
...+|++.+|++.+ .+++++++++++++.. +..++++||+|+++.|+|......+.. ..|++++.
T Consensus 68 ~~~~l~~~la~l~g----------~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~ 136 (400)
T 3nmy_A 68 TRFAYERCVAALEG----------GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSF 136 (400)
T ss_dssp HHHHHHHHHHHHHT----------CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHhC----------CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEE
Confidence 34667777777653 3367777777999998 467889999999999999865554331 26999999
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSE 251 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~ 251 (442)
++.+ |++.+++++++ ++++|++++|+||||.+++ +++|+++|++||+++|+||+|+...+..
T Consensus 137 v~~~-------d~~~l~~~i~~------~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~-- 198 (400)
T 3nmy_A 137 VDLT-------DPAAFKAAIRA------DTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR-- 198 (400)
T ss_dssp ECTT-------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC--
T ss_pred ECCC-------CHHHHHHHhcc------CCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC--
Confidence 8864 78999998864 7899999999999999998 8888999999999999999998533211
Q ss_pred cccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEE--EeecCHHHHHHHHHcccc--CCCcHHHHHHHHHHhcCchh
Q 046900 252 FVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGT--IYSYNDKVVTTARRMSSF--TLISSQTQYLLASMLSNKKF 327 (442)
Q Consensus 252 ~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~--i~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~ 327 (442)
++ . .+..+++.|+||.++.+|.++|. +++.++.+.+.++..... ...++....++...++.
T Consensus 199 --~~-~---------~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~--- 263 (400)
T 3nmy_A 199 --PL-S---------LGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT--- 263 (400)
T ss_dssp --GG-G---------GTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT---
T ss_pred --hh-h---------cCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH---
Confidence 10 0 13458899999999878877755 555567776666543332 34566666665555553
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee-cC----------------CceEEEEEecCCcccccChhhHHHHHHHH
Q 046900 328 TENYIKTNRERLQKRYQMIIEGLRSA-GIECL-KG----------------NAGLFCWMNLSPLLEEQTREGELALWDSM 389 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~----------------~~g~~~~~~~~~~~~~~~~~~~~~l~~~l 389 (442)
+....++..++...+.+.|++. .+... .| ..|.+++++++... +....+.+.+
T Consensus 264 ----l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~-----~~~~~~~~~l 334 (400)
T 3nmy_A 264 ----LPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF-----DAAKRFCEKT 334 (400)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH-----HHHHHHHHHC
T ss_pred ----HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH-----HHHHHHHHcC
Confidence 2334455567777888888765 33322 11 24568888886521 1234455444
Q ss_pred HHcCcEEEeCCCCCCC---------------------CCCCEEEEEeecCCHHHHHHHHHHHHHHHH
Q 046900 390 LHEVKLNISPGSSCHC---------------------SEPGWFRVCFANMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 390 ~~~~gi~v~pg~~f~~---------------------~~~~~iRls~~~~~~e~i~~~l~~l~~~l~ 435 (442)
+..++.+..|..+.. -.++.+|||++. |+.+..++.|.+++.
T Consensus 335 -~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 335 -ELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGI---EDLGDLRGDLERALV 397 (400)
T ss_dssp -SSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHC
T ss_pred -CcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence 333555555543320 134789999986 345556677777765
No 209
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.92 E-value=4.8e-23 Score=209.06 Aligned_cols=320 Identities=15% Similarity=0.200 Sum_probs=217.9
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc-------C-CCC------eEEEcCCCCc
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA-------D-PGD------ALLVPTPYYP 155 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~-------~-~gd------~Vl~~~p~y~ 155 (442)
.|....+..++.+.+.+++.+.+| ++++++++|+|+++++..++.++. + +|| .|+++.+.|+
T Consensus 139 ~~~~s~~~~~le~~~~~~la~l~g----~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~ 214 (515)
T 2jis_A 139 TYEIAPVFVLMEEEVLRKLRALVG----WSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHY 214 (515)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHT----CSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCT
T ss_pred chhhchHHHHHHHHHHHHHHHHhC----CCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccH
Confidence 455556677888888888888776 457899999999999988887763 2 575 8999999999
Q ss_pred ChHHhHhhhcCc---EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc
Q 046900 156 GFDRDLRWRTGI---KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK 232 (442)
Q Consensus 156 ~~~~~~~~~~G~---~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~ 232 (442)
.+...+.. .|. +++.+|+++ ++.+|+++|++++.+...++.++++|++++|+||||.+.+ +++|+++|+++
T Consensus 215 s~~~~~~~-~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~ 288 (515)
T 2jis_A 215 SIQKGAAF-LGLGTDSVRVVKADE--RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRH 288 (515)
T ss_dssp HHHHHHHH-TTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHH
T ss_pred HHHHHHHH-cCCCCCcEEEEecCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHc
Confidence 99988885 787 899999874 5679999999999875545556899999999999999987 78888999999
Q ss_pred CcEEEEeccCCcCCCCCCCccc-HHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCH-HH-HHHHHHccc---
Q 046900 233 NIHLVSDEIYSGSAFSSSEFVS-IAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYND-KV-VTTARRMSS--- 306 (442)
Q Consensus 233 ~~~vi~De~y~~~~~~~~~~~s-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~-~~-~~~~~~~~~--- 306 (442)
|+++++|++|+.+.+..+.+.. +..+ .+..+++.|++|.++ .+.++|++++.++ .+ ...+.....
T Consensus 289 g~~l~vD~a~~~~~~~~~~~~~~~~g~--------~~aD~v~~s~hK~l~-~p~g~G~l~~~~~~~~~~~~~~~~~~yl~ 359 (515)
T 2jis_A 289 GLWLHVDAAWGGSVLLSQTHRHLLDGI--------QRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLKRCHGSQASYLF 359 (515)
T ss_dssp TCEEEEEETTGGGGGGCTTTGGGGTTG--------GGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHHHHHCC------
T ss_pred CCeEEEehhhhhHHHhChhhHhhcCCC--------ccCCEEEECcccccC-CCCCeeEEEEeChHHHHHHHhcCCchhcc
Confidence 9999999999987654332221 1111 022367789999987 4467999999766 33 332110000
Q ss_pred -----------cC----C----CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec-CCceEE
Q 046900 307 -----------FT----L----ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK-GNAGLF 365 (442)
Q Consensus 307 -----------~~----~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~g~~ 365 (442)
++ . ...+.+.++...+. .+.+++..++..++++++.+.|++. |+++.. +..+.+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v 434 (515)
T 2jis_A 360 QQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG-----DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNV 434 (515)
T ss_dssp ---CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEE
T ss_pred CCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEE
Confidence 00 0 11344444444443 2335667778888899999999886 888765 445555
Q ss_pred EEEecCCcccc----cChhh-----HHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee--cCCHHHHHHHHHHHHHHH
Q 046900 366 CWMNLSPLLEE----QTREG-----ELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA--NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 366 ~~~~~~~~~~~----~~~~~-----~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~e~i~~~l~~l~~~l 434 (442)
++...|..... ..... ...+.+.+.+. |+.+...... ....+++|++++ ..+++++++++++|++++
T Consensus 435 ~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~-G~~~~~~~~~-~~~~~~lRis~~~~~~t~edid~~~~~l~~~~ 512 (515)
T 2jis_A 435 CFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKE-GSMMIGYQPH-GTRGNFFRVVVANSALTCADMDFLLNELERLG 512 (515)
T ss_dssp EEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHH-TSCEEEEEEE-TTEEEEEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEeCccccccccchhHHHHHHHHHHHHHHHHHhc-CCEEEEEEEE-CCceEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 55433431110 11101 12356667666 7544211100 112468999995 228999999999999876
Q ss_pred H
Q 046900 435 Q 435 (442)
Q Consensus 435 ~ 435 (442)
+
T Consensus 513 ~ 513 (515)
T 2jis_A 513 Q 513 (515)
T ss_dssp T
T ss_pred h
Confidence 4
No 210
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.92 E-value=1.5e-23 Score=206.28 Aligned_cols=283 Identities=11% Similarity=0.060 Sum_probs=186.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH----hhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL----RWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~~G~~v~~ 171 (442)
-..++++.+|++++ .+++++++|+++++.+++.+++++||+|+++.|.|.+....+ + ..|+++..
T Consensus 83 ~~~~le~~lA~l~g----------~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~-~~G~~v~~ 151 (415)
T 2fq6_A 83 THFSLQQAMCELEG----------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILS-KLGVTTSW 151 (415)
T ss_dssp HHHHHHHHHHHHHT----------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGG-GGTCEEEE
T ss_pred hHHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHH-HcCcEEEE
Confidence 35678888888865 346778889999999999999999999999999998876543 3 37999998
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHh--cCcEEEEeccCCcCCCCC
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATR--KNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~--~~~~vi~De~y~~~~~~~ 249 (442)
++.+ |+++|++++++ ++++|++++|+||||.+.+ +++|+++|++ +|+++|+|++|+...+ .
T Consensus 152 v~~~-------d~~~le~ai~~------~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~-~ 214 (415)
T 2fq6_A 152 FDPL-------IGADIVKHLQP------NTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL-F 214 (415)
T ss_dssp ECTT-------CGGGGGGGCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS-S
T ss_pred ECCC-------CHHHHHHhhcc------CCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc-C
Confidence 8753 67889888764 7899999999999999998 7888899999 9999999999986432 1
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCce-eEEEeecCHHHHHHHHHccc-cC-CCcHHHHHHHHHHhcCch
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFR-VGTIYSYNDKVVTTARRMSS-FT-LISSQTQYLLASMLSNKK 326 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~R-iG~i~~~~~~~~~~~~~~~~-~~-~~s~~~q~~~~~~l~~~~ 326 (442)
. ++ .+ +..+++.|+||.+|.+|.+ +||++++++ +.+.++.... .+ ..++....++...++
T Consensus 215 ~---p~-~~---------g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~~l~~~~~~~G~~~~~~~a~~~~~~l~--- 277 (415)
T 2fq6_A 215 K---AL-DF---------GIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWEQLRENAYLMGQMVDADTAYITSRGLR--- 277 (415)
T ss_dssp C---GG-GG---------TCSEEEEETTTTTTCSSSCCCEEEEECTT-THHHHHHHHHHTTCCCCHHHHHHHHHHHH---
T ss_pred C---cc-cc---------CCeEEEEeCccccCCCCCceEEEEEeCHH-HHHHHHHHHHhcCCCCCHHHHHHHHhhhh---
Confidence 1 11 11 3458899999999978765 599998554 4444443222 22 234443333333222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eecC----------------CceEEEEEecCCcccccChhhHHHHHHH
Q 046900 327 FTENYIKTNRERLQKRYQMIIEGLRSA-GIE-CLKG----------------NAGLFCWMNLSPLLEEQTREGELALWDS 388 (442)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (442)
.+....+...++...+.+.|++. .+. +..| ..+..+++.++... ...+...+...
T Consensus 278 ----~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~---~~~~~~~~l~~ 350 (415)
T 2fq6_A 278 ----TLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKL---NNEELANYLDN 350 (415)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCC---CHHHHHHHHTT
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCC---CHHHHHHHHHh
Confidence 23344455566777777888765 222 1111 13447788876420 01124444444
Q ss_pred HHHcCcEEEeCCCCCC-------------------CCCCCEEEEEeecC-CHHHHHHHHHHHH
Q 046900 389 MLHEVKLNISPGSSCH-------------------CSEPGWFRVCFANM-SEQTLEVALKRIH 431 (442)
Q Consensus 389 l~~~~gi~v~pg~~f~-------------------~~~~~~iRls~~~~-~~e~i~~~l~~l~ 431 (442)
+ +..++.+..|+.+. +..++.||||++.. ++++++.+.+.|+
T Consensus 351 l-~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~ 412 (415)
T 2fq6_A 351 F-SLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA 412 (415)
T ss_dssp C-SSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHH
T ss_pred C-CcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHH
Confidence 3 33356666553311 11247899999852 3444555555444
No 211
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.91 E-value=5.7e-23 Score=206.65 Aligned_cols=323 Identities=12% Similarity=0.090 Sum_probs=227.5
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCcc------CCCcEEEecChHHHHHHHHHhhcC-------------------C
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKF------DLNRIVVTAGATAANELLTFILAD-------------------P 143 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~------~~~~i~~t~G~~~ai~~~~~~l~~-------------------~ 143 (442)
..|....+..++++++++|+.+.+|.+... .....++|+|+++++..++.+..+ +
T Consensus 108 ~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~ 187 (481)
T 4e1o_A 108 FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNA 187 (481)
T ss_dssp SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHT
T ss_pred CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccC
Confidence 457667788999999999999998742111 013689999999999888766532 5
Q ss_pred CCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHH
Q 046900 144 GDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLE 223 (442)
Q Consensus 144 gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~ 223 (442)
++.|+++.++|..+...+.. .|++++.+|+++ ++.+|+++|+++|++...++..+.+|+++.++|+||.+-+ ++
T Consensus 188 ~~~v~~s~~~H~s~~~~~~~-~g~~~~~v~~~~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~---l~ 261 (481)
T 4e1o_A 188 RLVAYASDQAHSSVEKAGLI-SLVKMKFLPVDD--NFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC---LS 261 (481)
T ss_dssp TEEEEEETTSCHHHHHHHHH-HTCEEEEECCCT--TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HH
T ss_pred CeEEEEcCcchHHHHHHHHh-CCCceEEEEcCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC---HH
Confidence 67999999999999999885 899999999864 5789999999999876555555788889999999998866 88
Q ss_pred HHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHH-HHH
Q 046900 224 ELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVT-TAR 302 (442)
Q Consensus 224 ~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~-~~~ 302 (442)
+|+++|++||+++++|++|+...+....+.....-.. .-..+..+++|.++.| ..+|++++.++.... .+.
T Consensus 262 ~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~-------~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~ 333 (481)
T 4e1o_A 262 ELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIE-------YADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFS 333 (481)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGG-------GCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTTC
T ss_pred HHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcc-------cCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHhc
Confidence 8999999999999999999875432222221110000 1124567999998755 567888776655432 211
Q ss_pred Hcccc------------------CC--CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC
Q 046900 303 RMSSF------------------TL--ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGN 361 (442)
Q Consensus 303 ~~~~~------------------~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 361 (442)
....+ .+ ...+.+.++...+. .+.++++.++..++++++.+.|++. |+++..+.
T Consensus 334 ~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~ 408 (481)
T 4e1o_A 334 VNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG-----VKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKR 408 (481)
T ss_dssp CCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCC
T ss_pred CCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Confidence 10000 00 12344555444443 2346677788889999999999987 88887655
Q ss_pred ceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec--CCHHHHHHHHHHHHHHHHHHH
Q 046900 362 AGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN--MSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 362 ~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~--~~~e~i~~~l~~l~~~l~~~~ 438 (442)
...++++.++... ....++.+.|.++..+.+.|+.. .+..++|+++.. .+++++++++++|+++.++..
T Consensus 409 ~~~~v~f~~~~~~-----~~~~~l~~~L~~~g~~~~~~~~~---~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 409 HLGLVVFRLKGPN-----SLTENVLKEIAKAGRLFLIPATI---QDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp CSSEEEEEESSCH-----HHHHHHHHHHHHHCSSBCEEEEE---TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEeCCch-----HHHHHHHHHHHhCCeEEEEeeEE---CCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 5557777775421 13568888888883355555433 234689999763 268999999999999987754
No 212
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.91 E-value=5.7e-23 Score=206.18 Aligned_cols=322 Identities=12% Similarity=0.105 Sum_probs=222.9
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCcc-----CCCcEEEecChHHHHHHHHHhhcC-------------------CCC
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKF-----DLNRIVVTAGATAANELLTFILAD-------------------PGD 145 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-----~~~~i~~t~G~~~ai~~~~~~l~~-------------------~gd 145 (442)
.|....+..++++++++|+.+.+|.+... .....++|+|+|+++..++.+..+ +++
T Consensus 104 ~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 183 (475)
T 3k40_A 104 TWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKL 183 (475)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHE
T ss_pred CccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCe
Confidence 46666788999999999999988732110 113689999999998887766521 346
Q ss_pred eEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHH
Q 046900 146 ALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEEL 225 (442)
Q Consensus 146 ~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l 225 (442)
.|+++.++|..+...+.. .|++++.+|+++ ++ +|+++|+++|++....+..+.+|+++.++|+||.+-+ +++|
T Consensus 184 ~vi~s~~~H~s~~~~~~~-~g~~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~---l~~I 256 (475)
T 3k40_A 184 VGYCSDQAHSSVERAGLL-GGVKLRSVQSEN--HR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY---LDEC 256 (475)
T ss_dssp EEEEETTSCHHHHHHHHH-HTCEEEEECCBT--TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHH
T ss_pred EEEECCCchHHHHHHHHH-cCCceEEEECCC--CC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC---HHHH
Confidence 899999999999999885 899999999875 45 9999999999876555555778899999999999866 8889
Q ss_pred HHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHH-HHHHHHc
Q 046900 226 LDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKV-VTTARRM 304 (442)
Q Consensus 226 ~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~-~~~~~~~ 304 (442)
+++|++||+++++|++|+...+....+.....-.. ....+..+++|.++ ....+|++++.++.. .+.+...
T Consensus 257 ~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~-------~~Ds~~~~~hK~l~-~p~g~g~l~~~~~~~l~~~~~~~ 328 (475)
T 3k40_A 257 GPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIE-------SADSFNFNPHKWML-VNFDCSAMWLKDPSWVVNAFNVD 328 (475)
T ss_dssp HHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGG-------GCSEEEECHHHHSS-CCSSCEEEEESSGGGC-------
T ss_pred HHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcc-------cCCEEEECchhccC-CCCceEEEEEeCHHHHHHHhcCC
Confidence 99999999999999999864332221211110000 11245689999886 445688888765543 2222111
Q ss_pred cccC----------------CC----cHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCce
Q 046900 305 SSFT----------------LI----SSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAG 363 (442)
Q Consensus 305 ~~~~----------------~~----s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g 363 (442)
..+. .. ..+.+.++...+. .+.++++.++..++.+++.+.|++. |+++..+...
T Consensus 329 ~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~ 403 (475)
T 3k40_A 329 PLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG-----VENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINM 403 (475)
T ss_dssp --------------------CCCGGGTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBT
T ss_pred ccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCce
Confidence 0000 00 1233344444332 2345677788888999999999987 8888765544
Q ss_pred EEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec--CCHHHHHHHHHHHHHHHHHHHh
Q 046900 364 LFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN--MSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~--~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.++++.++... ....++.+.|.++.++.+.|+..+ +..++|+++.+ .+++++++++++|+++.++..+
T Consensus 404 ~iv~f~~~~~~-----~~~~~l~~~L~~~g~~~~~~~~~~---g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 404 GLVCFRLKGSN-----ERNEALLKRINGRGHIHLVPAKIK---DVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp TEEEEEESSCH-----HHHHHHHHHHHHHTSCBCEEEEET---TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCch-----HHHHHHHHHHHhCCcEEEEeeEEC---CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 56667765421 135788889988844555554432 35789999873 2789999999999999887654
No 213
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.91 E-value=1.9e-22 Score=196.39 Aligned_cols=291 Identities=18% Similarity=0.208 Sum_probs=195.4
Q ss_pred chHHHHHHH-HHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-cCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEe
Q 046900 96 GLKSFRQAM-ASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIH 173 (442)
Q Consensus 96 g~~~lr~~i-a~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~ 173 (442)
...+|++++ |++++ ..+++++++|+++++.+++.++ +++||+|+++.|+|..+...+.. .|++++.++
T Consensus 37 ~~~~l~~~~~a~~~g---------~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~~~-~G~~~~~v~ 106 (377)
T 3ju7_A 37 INQRFEQTIMSGFFQ---------NRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAAIW-CGLEPYFID 106 (377)
T ss_dssp HHHHHHHHHHHHTST---------TCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHHHH-TTCEEEEEC
T ss_pred HHHHHHHHHHHHHhC---------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHH-cCCEEEEEe
Confidence 468999999 99864 1567899999999999999998 89999999999999999998885 999999999
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCc--eeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCC-CCC
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMR--VRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAF-SSS 250 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~--~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~-~~~ 250 (442)
+++ ++|.+|++++++++... + +|+|+ |+||+|.+.+ +++|.++|+ +|++||+|++|+.... .+.
T Consensus 107 ~~~-~~~~~d~~~l~~~i~~~-----~~~tk~v~---~~~~~G~~~~---~~~i~~la~-~~~~vi~D~a~a~g~~~~~~ 173 (377)
T 3ju7_A 107 ISI-DDWYMDKTVLWDKIEEL-----KEEVAIVV---PYATFGSWMN---LEEYEELEK-KGVPVVVDAAPGFGLMNGGM 173 (377)
T ss_dssp BCT-TTCSBCHHHHHHHHHHH-----GGGEEEEC---CBCGGGBCCC---CHHHHHHHH-TTCCBEEECTTCTTCEETTE
T ss_pred cCC-ccCCcCHHHHHHHHhcC-----CCCceEEE---EECCCCCccC---HHHHHHHHh-cCCEEEEECCCccCCeECCE
Confidence 875 46889999999998321 4 88776 7789999988 667788888 9999999999984321 111
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEec--CcccCCCCCceeEEEeecCHHHHHHHHHcccc--------------CCCcHHH
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYS--LSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--------------TLISSQT 314 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S--~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--------------~~~s~~~ 314 (442)
.+ ... ..+ +.+.| .+|.++ +| +.|+++++++.+.+.++..... ..++.+.
T Consensus 174 ---~~---g~~----~~d--~~~~S~~~~K~l~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~ 239 (377)
T 3ju7_A 174 ---HY---GQD----FSG--MIIYSFHATKPFG-IG-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYA 239 (377)
T ss_dssp ---ET---TTT----CSS--EEEEECBTTSSSC-CB-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHH
T ss_pred ---ec---cCC----CCc--EEEEECCCCCcCC-CC-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHH
Confidence 10 000 012 34455 469997 45 7899998888887777654432 2244454
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC---CeeecCCc--e--EEEEEecCCcccccChhhHHHHHH
Q 046900 315 QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAG---IECLKGNA--G--LFCWMNLSPLLEEQTREGELALWD 387 (442)
Q Consensus 315 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---~~~~~~~~--g--~~~~~~~~~~~~~~~~~~~~~l~~ 387 (442)
++++...++. +....++.+++++++.+.|++.+ +.+.+..+ . .|+.+.++... +..++.+
T Consensus 240 aa~~~~~l~~-------l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~ 306 (377)
T 3ju7_A 240 AAIGIATMKK-------WDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV------RNKQVIE 306 (377)
T ss_dssp HHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS------CHHHHHH
T ss_pred HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh------hHHHHHH
Confidence 4444444432 23334444555666667776653 22322211 1 12334444321 2567788
Q ss_pred HHHHcCcEEEeCCCC--CCC-----C---C---------CCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 388 SMLHEVKLNISPGSS--CHC-----S---E---------PGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 388 ~l~~~~gi~v~pg~~--f~~-----~---~---------~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.|.++ ||.++.+.. +.. . . ...+||.+. .++++++++.++.|++++.+.
T Consensus 307 ~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 307 DLKKQ-KIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVSA 375 (377)
T ss_dssp HHHTT-TBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred HHHHC-CCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 87665 999887641 110 0 0 135899886 558999999999999887764
No 214
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.91 E-value=2.4e-22 Score=200.59 Aligned_cols=302 Identities=13% Similarity=0.078 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCc---EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH--------hHhhhcC
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNR---IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR--------DLRWRTG 166 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~---i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~~G 166 (442)
..|++...+++.+.+| ++.++ .++++++++++..++.++++|||+|+++++.|.++.. .+.. .|
T Consensus 99 ~~lE~~a~~~~a~l~g----~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~-~g 173 (490)
T 2a7v_A 99 DEIELLCQRRALEAFD----LDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISA-TS 173 (490)
T ss_dssp THHHHHHHHHHHHHTT----CCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------
T ss_pred HHHHHHHHHHHHHHcC----CCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHH-cC
Confidence 4666555566666655 44442 3445577999999999999999999999999865421 1222 45
Q ss_pred c--EEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC-
Q 046900 167 I--KIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS- 243 (442)
Q Consensus 167 ~--~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~- 243 (442)
. ++++++++++ ++.+|+++|++.+++. ++|+|+++.|+||+ ..+ +++|.++|++||+++++|++|.
T Consensus 174 ~~~~~~~~~vd~~-~~~iD~d~le~~l~~~-----~~klIi~~~s~~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~ 242 (490)
T 2a7v_A 174 IFFESMPYKLNPK-TGLIDYNQLALTARLF-----RPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHIS 242 (490)
T ss_dssp -------CCBCTT-TCSBCHHHHHHHHHHH-----CCSEEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECGGGH
T ss_pred CeEEEEecccccc-cCCcCHHHHHHHHhhc-----CCcEEEEcCCCCCC--ccc---HHHHHHHHHHcCCEEEEcccccc
Confidence 4 3445555533 4689999999999753 67888888899986 334 8889999999999999999975
Q ss_pred cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCH--------------HHHHHHHHcccc--
Q 046900 244 GSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYND--------------KVVTTARRMSSF-- 307 (442)
Q Consensus 244 ~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~--------------~~~~~~~~~~~~-- 307 (442)
.+++.+..+.++ . ...+++.|+||++ .|.|.|+++++++ .+.+.+++...+
T Consensus 243 glv~~g~~~~~~-~----------~aDiv~~S~hK~l--~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~ 309 (490)
T 2a7v_A 243 GLVAAKVIPSPF-K----------HADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSL 309 (490)
T ss_dssp HHHHTTSSCCGG-G----------TCSEEEEESSGGG--CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTT
T ss_pred ccccCCcCCCCC-C----------CCCEEEECCcccC--ccccchheeeccchhcccccccchhhHHHHHHHHHHhcccC
Confidence 333333222222 1 1126789999988 4678899998654 244555543222
Q ss_pred -CCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-CceEEEEEecCCcccccChhhHHHH
Q 046900 308 -TLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKG-NAGLFCWMNLSPLLEEQTREGELAL 385 (442)
Q Consensus 308 -~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l 385 (442)
++.+.....+++.++.. ......++..+++.++++++.+.|.+.|+++..+ ...+++|++++.... +..++
T Consensus 310 qggp~~~~iaAla~Al~~--~~~~~~~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g~-----~~~~~ 382 (490)
T 2a7v_A 310 QGGPHNHAIAAVAVALKQ--ACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGL-----DGARA 382 (490)
T ss_dssp CCSCCHHHHHHHHHHHHH--HHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTC-----CHHHH
T ss_pred CCCchHHHHHHHHHHHHH--HhhhhHHHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCCC-----CHHHH
Confidence 22233333333333331 1112236677888899999999999999988652 345688999865211 13455
Q ss_pred HHHHHHcCcEEEeCCCCCCC---CCCCEEEEEeec-----CCHHHHHHHHHHHHHHHHH
Q 046900 386 WDSMLHEVKLNISPGSSCHC---SEPGWFRVCFAN-----MSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 386 ~~~l~~~~gi~v~pg~~f~~---~~~~~iRls~~~-----~~~e~i~~~l~~l~~~l~~ 436 (442)
.+.| ++.||.+..+..++. ..++.|||+... .++++++++++.|.+++..
T Consensus 383 ~~~L-~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 383 ERVL-ELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp HHHH-HHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 5555 566999986544432 224679997742 4789999999999988864
No 215
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.91 E-value=3.7e-23 Score=205.84 Aligned_cols=291 Identities=15% Similarity=0.128 Sum_probs=188.3
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHh-hcCCCCeEEEcCCCCcChHHhHhh---hcCcEE
Q 046900 94 YHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFI-LADPGDALLVPTPYYPGFDRDLRW---RTGIKI 169 (442)
Q Consensus 94 ~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~-l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v 169 (442)
.+|..++.+.+.+.+.+.+| +++++|++++|++.++..+..+ ..++||+|+++.|+|+.+...++. ..|+++
T Consensus 103 ~~g~~~~~~~~~~~la~~~g----~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v 178 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAG----LEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKL 178 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHT----SSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEE
T ss_pred hhhHHHHHHHHHHHHHHHhC----CCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEE
Confidence 34656666666666666555 5677899999999443333322 247899999999999998765531 279999
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEecc-CCcCCCC
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEI-YSGSAFS 248 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~-y~~~~~~ 248 (442)
+.++.+ ++.+|+++ +. .++++|++++| ||||.+.+ +++|+++|+++|+++++|-. .+ ++
T Consensus 179 ~~v~~~---~~~~d~~~----i~------~~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a---~g 238 (438)
T 1wyu_A 179 LTLPLE---GGRTPLPE----VG------EEVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLS---LG 238 (438)
T ss_dssp EEECCB---TTBCCCCC----CC------TTEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTG---GG
T ss_pred EEEcCc---CCccCHHH----hC------CCeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhh---cc
Confidence 999872 24677665 32 27899999999 99999987 88888999999999996622 21 11
Q ss_pred CCCcccHHHHHhhhcCCCCCcEEEEecCcccCC----CCCceeEEEeecCHHHHHHHH----------------------
Q 046900 249 SSEFVSIAEILEARQYKDSERVHIVYSLSKDLG----LPGFRVGTIYSYNDKVVTTAR---------------------- 302 (442)
Q Consensus 249 ~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g----~~G~RiG~i~~~~~~~~~~~~---------------------- 302 (442)
. +.....+ +..+++.| +|.|| +.|.|+||+++++ .+.+.+.
T Consensus 239 ~--~~~~~~~---------g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~l~~ 305 (438)
T 1wyu_A 239 V--LKPPGAY---------GADIAVGD-GQSLGLPMGFGGPHFGFLATKK-AFVRQLPGRLVSETVDVEGRRGFILTLQA 305 (438)
T ss_dssp T--BCCHHHH---------TCSEEEEE-CTTTTCCCGGGCSCCEEEEECG-GGGGGCCSCCEEEEEBTTSCEEEEECCGG
T ss_pred C--cCCCccC---------CCCEEEEC-CcccCCCccCCCCCeeEEEEcH-HHHHhCCCceeccccccCCCcceeeeccc
Confidence 1 1111222 11245556 66554 4567999999954 4333221
Q ss_pred ------HccccCCC---cHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCceEEEEEecCC
Q 046900 303 ------RMSSFTLI---SSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKGNAGLFCWMNLSP 372 (442)
Q Consensus 303 ------~~~~~~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~ 372 (442)
........ +.+....++.++.. ...+.+++..+++.++++++.+.|++. |+++..+. .+|.++.+..
T Consensus 306 ~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~--~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~ 382 (438)
T 1wyu_A 306 REQYIRRAKAKSNITTNAQLTALMGAMYLAA--LGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK-PFFNEFALAL 382 (438)
T ss_dssp GSHHHHGGGSSCCCCSCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS-SBCSEEEEEC
T ss_pred cccccchhcccCCccchHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC-CeEEEEEEeC
Confidence 00111111 11212111111221 112346778888999999999999988 88887653 3333222221
Q ss_pred cccccChhhHHHHHHHHHHcCcEEE--eCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHH
Q 046900 373 LLEEQTREGELALWDSMLHEVKLNI--SPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 373 ~~~~~~~~~~~~l~~~l~~~~gi~v--~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l 434 (442)
.. +..++++.|.++ ||.+ .+|..|. ++++|||+. ..+++++++++++|++++
T Consensus 383 ~~------~~~~~~~~L~~~-gi~v~~~~~~~~~---~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 383 PK------DPEAVRRALAER-GFHGATPVPREYG---ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp SS------CHHHHHHHHHHT-TCCCCEECCTTSC---SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred CC------CHHHHHHHHHHC-CceeccccccccC---CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 11 267888998876 9998 7777664 579999998 227999999999998764
No 216
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.90 E-value=3.6e-22 Score=195.54 Aligned_cols=288 Identities=13% Similarity=0.124 Sum_probs=193.6
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhh-------cCCCCeEEEcCCCCcChHHhHhh
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFIL-------ADPGDALLVPTPYYPGFDRDLRW 163 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l-------~~~gd~Vl~~~p~y~~~~~~~~~ 163 (442)
|.+..+..++|+++|++++ . +++++++++++++..++.++ +++||.|+++.|+|..+...+..
T Consensus 30 ~~~~~~~~~l~~~la~~~~--------~--~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~ 99 (390)
T 3b8x_A 30 FTMGEYVKQYETQFAKTFG--------S--KYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQ 99 (390)
T ss_dssp CSSCHHHHHHHHHHHHHHT--------C--SEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHC--------C--CcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHHH
Confidence 4455678999999999986 2 25677777778999999998 78999999999999999998884
Q ss_pred hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 164 RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 164 ~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
.|++++.++++++ ++.+|++.|++.+++ ++++|+++| ++|...+ +++|.++|+++|+++|+|++|+
T Consensus 100 -~g~~~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~~~~---~~g~~~~---~~~i~~l~~~~~~~li~D~a~~ 165 (390)
T 3b8x_A 100 -YGLRVKFVDIDIN-TLNIDIESLKEAVTD------STKAILTVN---LLGNPNN---FDEINKIIGGRDIILLEDNCES 165 (390)
T ss_dssp -TTCEEEEECBCTT-TCSBCHHHHHHHCCT------TEEEEEEEC---GGGCCCC---HHHHHHHHTTSCCEEEEECTTC
T ss_pred -cCCEEEEEecCcc-ccCcCHHHHHHHhCc------CCeEEEEEC---CccChhh---HHHHHHHHHHcCCEEEEECcCc
Confidence 8999999998764 478999999998864 788988885 4555444 8888999999999999999998
Q ss_pred cCCCCCCCcccHHHHHhhhcCCCCCcEEEEecC----cccCCCCCceeEEEeecCHHHHHHHHHccccC-----------
Q 046900 244 GSAFSSSEFVSIAEILEARQYKDSERVHIVYSL----SKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT----------- 308 (442)
Q Consensus 244 ~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~----SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~----------- 308 (442)
....... . . .+....+.++ +|.++ +| +.|+++++++.+.+.++.....+
T Consensus 166 ~g~~~~~--~-------~-----~g~~~~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~ 229 (390)
T 3b8x_A 166 MGATFNN--K-------C-----AGTFGLMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKV 229 (390)
T ss_dssp TTCEETT--E-------E-----TTSSSSEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETT
T ss_pred ccCEECC--c-------c-----cccccceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHHHHHhcCCCccccccccc
Confidence 4321110 0 0 0111122333 45553 33 45999986656655443321100
Q ss_pred ------------------C----CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC--Cce
Q 046900 309 ------------------L----ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLKG--NAG 363 (442)
Q Consensus 309 ------------------~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~g 363 (442)
+ ++.+...++...+ +++++..++.++.++++.+.|++. |+++..+ .++
T Consensus 230 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-------~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 302 (390)
T 3b8x_A 230 TGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-------KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESS 302 (390)
T ss_dssp TEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCC
T ss_pred cccccccccccccceeccccccCcCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcc
Confidence 1 3344444333333 234566777788889999999876 7766543 233
Q ss_pred E-EEEEecCCcccccChhhHHHHHHHHHHcCcEEEeC---CCCCCC-C--C-----------------CCEEEEEee-cC
Q 046900 364 L-FCWMNLSPLLEEQTREGELALWDSMLHEVKLNISP---GSSCHC-S--E-----------------PGWFRVCFA-NM 418 (442)
Q Consensus 364 ~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~p---g~~f~~-~--~-----------------~~~iRls~~-~~ 418 (442)
+ .+++.++.... .+..++.+.|.++ ||.+.+ |+.+.. . . .+.+||++. .+
T Consensus 303 ~~~~~i~~~~~~~----~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~ 377 (390)
T 3b8x_A 303 WFGFSFIIKKDSG----VIRKQLVENLNSA-GIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIE 377 (390)
T ss_dssp CCEEEEEECTTSC----CCHHHHHHHHHHT-TBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSC
T ss_pred cEEEEEEecCcCc----ccHHHHHHHHHHC-CCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCC
Confidence 3 35566652100 0256788888665 999986 332111 0 0 035999986 45
Q ss_pred CHHHHHHHHHHH
Q 046900 419 SEQTLEVALKRI 430 (442)
Q Consensus 419 ~~e~i~~~l~~l 430 (442)
++++++++++.|
T Consensus 378 t~~di~~i~~~l 389 (390)
T 3b8x_A 378 LFDEIDYLREVL 389 (390)
T ss_dssp CHHHHHHHHHHT
T ss_pred CHHHHHHHHHhh
Confidence 899999988876
No 217
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.90 E-value=1.7e-22 Score=198.01 Aligned_cols=254 Identities=15% Similarity=0.094 Sum_probs=181.2
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE---ecChHHHHHHHHHhhcCCCCeEEEcC-CCCcChHH-----
Q 046900 89 ALFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV---TAGATAANELLTFILADPGDALLVPT-PYYPGFDR----- 159 (442)
Q Consensus 89 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~---t~G~~~ai~~~~~~l~~~gd~Vl~~~-p~y~~~~~----- 159 (442)
..|++. |...|++.+|++++ .+..++ ++|+++++..++.+++++||+|+++. |.|..+..
T Consensus 54 ~~y~~~-~~~~Le~~lA~l~g----------~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~ 122 (409)
T 3jzl_A 54 YGYDDE-GRDTLERVYATVFK----------TEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIR 122 (409)
T ss_dssp TCTTCH-HHHHHHHHHHHHHT----------CSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSS
T ss_pred CCCChh-HHHHHHHHHHHHhC----------CCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcc
Confidence 346554 67888888888875 344555 88999999999999999999999998 99999874
Q ss_pred -----hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeC----CCCCCCcCCCHHHHHHHHHHHH
Q 046900 160 -----DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITN----PSNPLGATIQRSVLEELLDFAT 230 (442)
Q Consensus 160 -----~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~----P~NPtG~~~~~~~l~~l~~~~~ 230 (442)
.++ ..|++++.+++++ ++.+|++++++++++ ++++|++++ |+||||.+ .++++|+++|+
T Consensus 123 g~~~~~l~-~~G~~~~~v~~~~--~g~~d~e~l~~ai~~------~tklV~i~~s~g~p~nptg~v---~~l~~I~~la~ 190 (409)
T 3jzl_A 123 KQGQGSLK-DFHIGYSSVPLLE--NGDVDFPRIAKKMTP------KTKMIGIQRSRGYADRPSFTI---EKIKEMIVFVK 190 (409)
T ss_dssp SSSSSCTG-GGTCEEEECCCCT--TSCCCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCH---HHHHHHHHHHH
T ss_pred cchhhHHH-HcCCEEEEeCCCC--CCCcCHHHHHHhccC------CCeEEEEECCCCCCCCCcCcc---ccHHHHHHHHH
Confidence 345 3799999999875 457899999998864 789999999 99999977 45889999999
Q ss_pred h--cCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcc-c
Q 046900 231 R--KNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMS-S 306 (442)
Q Consensus 231 ~--~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~-~ 306 (442)
+ +++++|+|++|+.+.+...+. . . +..++++|+||.+|.+| .+.||+++ ++.+.+.++... .
T Consensus 191 ~~~~~~~livD~a~~~~~~~~~p~-~---~---------g~Div~~S~sK~lgg~~~~~GG~v~~-~~~li~~l~~~~~~ 256 (409)
T 3jzl_A 191 NINPEVIVFVDNCYGEFVEYQEPP-E---V---------GADIIAGSLIKNPGGGLAKTGGYIAG-KEALVDLCGYRLTT 256 (409)
T ss_dssp HHCTTCEEEEECTTCTTTSSCCSG-G---G---------TCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHHHHHHHSC
T ss_pred hhCCCCEEEEeCCcccccccCCcc-c---c---------CCeEEEECccccCCccCCceEEEEEe-CHHHHHHHHHHhcc
Confidence 9 999999999999876433221 1 1 33488999999998555 44699998 566666665422 1
Q ss_pred c-C---CCcHHH-HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC----ceEEEEEecCCccccc
Q 046900 307 F-T---LISSQT-QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGN----AGLFCWMNLSPLLEEQ 377 (442)
Q Consensus 307 ~-~---~~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~g~~~~~~~~~~~~~~ 377 (442)
. . ..+.+. +.++...+. .+...+++..+++.++.+.|+++|+++.+.. ..+.+.+.+.+
T Consensus 257 ~~~g~~~g~~~~~~~~~l~gl~-------~~~~r~~~~~~~a~~la~~L~~~g~~v~p~~~~~~~~~i~~i~l~~----- 324 (409)
T 3jzl_A 257 PGIGREAGASLYSLLEMYQGFF-------LAPHVTAQAIKGARFTAAMLAEFGVEADPVWDAPRTDLIQSVSFHN----- 324 (409)
T ss_dssp TTTGGGCCCCTTCHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCCEEECSC-----
T ss_pred ccccccccccHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCccEEEEEEeCC-----
Confidence 1 1 111111 222222221 2345566778889999999999998875432 22244555543
Q ss_pred ChhhHHHHHHHHHHc
Q 046900 378 TREGELALWDSMLHE 392 (442)
Q Consensus 378 ~~~~~~~l~~~l~~~ 392 (442)
.+...++++.|...
T Consensus 325 -~~~~~~~~~~L~~~ 338 (409)
T 3jzl_A 325 -KEKMVAFAQAIQAA 338 (409)
T ss_dssp -HHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHhc
Confidence 23467788877554
No 218
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.90 E-value=2e-22 Score=199.26 Aligned_cols=281 Identities=16% Similarity=0.170 Sum_probs=185.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH----hhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL----RWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~~G~~v~~v 172 (442)
..++++++|++++ .+ +.|+ ++++++++..++.+++++||+|+++.|+|..+...+ . ..|++++.+
T Consensus 60 ~~~l~~~la~~~g--------~~-~~v~-~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-~~g~~~~~~ 128 (421)
T 2ctz_A 60 VDVLEKRLAALEG--------GK-AALA-TASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLK-RLGIEVRFT 128 (421)
T ss_dssp HHHHHHHHHHHHT--------CS-EEEE-ESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHH-HTTCEEEEC
T ss_pred HHHHHHHHHHHhC--------CC-ceEE-ecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHH-HcCCEEEEE
Confidence 5788999998875 12 3354 455599999999999999999999999999877665 5 489999888
Q ss_pred -ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccC-CcCCCCCC
Q 046900 173 -HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIY-SGSAFSSS 250 (442)
Q Consensus 173 -~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y-~~~~~~~~ 250 (442)
+.+ |++++++.+++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++| +.. +.+.
T Consensus 129 ~~~~-------d~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~ 191 (421)
T 2ctz_A 129 SREE-------RPEEFLALTDE------KTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR 191 (421)
T ss_dssp CTTC-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC
T ss_pred CCCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC
Confidence 643 78999988864 8899999999999999999 888999999999999999999 532 2222
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecC--HHH----HHHHHH---------------------
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYN--DKV----VTTARR--------------------- 303 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~--~~~----~~~~~~--------------------- 303 (442)
+. .. +..+++.|+||.++.+|.|+|++++.+ ..+ ...+..
T Consensus 192 ~~----~~---------~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~ 258 (421)
T 2ctz_A 192 PL----AW---------GAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIV 258 (421)
T ss_dssp GG----GG---------TCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHH
T ss_pred cc----cc---------CCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHH
Confidence 11 11 234788999999998999999988742 111 111110
Q ss_pred ------ccccC-CCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec-C--------------
Q 046900 304 ------MSSFT-LISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA-GIECLK-G-------------- 360 (442)
Q Consensus 304 ------~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~-------------- 360 (442)
...++ ..++...+++...++. +....++..++.+++.+.|.+. ++.... |
T Consensus 259 ~~r~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~ 331 (421)
T 2ctz_A 259 KARVDGLRDQGQALGPFEAWVVLLGMET-------LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKY 331 (421)
T ss_dssp HHHHTHHHHHCCCCCHHHHHHHHHHHTT-------HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHH
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHcCcch-------HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHh
Confidence 00111 2334333333333332 2233444456778888888876 665541 1
Q ss_pred ---CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCC---------------------CCCCEEEEEee
Q 046900 361 ---NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHC---------------------SEPGWFRVCFA 416 (442)
Q Consensus 361 ---~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~---------------------~~~~~iRls~~ 416 (442)
..|..+.+.+... ......+.+.+ +..++.+..|..+.. ..++.+|+|++
T Consensus 332 ~~~~~g~ivsf~l~~~-----~~~~~~~~~~l-~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g 405 (421)
T 2ctz_A 332 FKGKPGAVLTFGLKGG-----YEAAKRFISRL-KLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVG 405 (421)
T ss_dssp HTTCCCSEEEEEETTH-----HHHHHHHHHTC-SSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECC
T ss_pred ccCCCceEEEEEeCCC-----HHHHHHHHHhC-CcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeC
Confidence 2233566666541 01233444443 223555555532110 12478999997
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 046900 417 NMSEQTLEVALKRIHNFM 434 (442)
Q Consensus 417 ~~~~e~i~~~l~~l~~~l 434 (442)
. +++++.++.|.+++
T Consensus 406 ~---e~~~~li~~l~~al 420 (421)
T 2ctz_A 406 L---EHVEDLKAELKEAL 420 (421)
T ss_dssp S---SCHHHHHHHHHHHT
T ss_pred C---CCHHHHHHHHHHHh
Confidence 5 46888888888765
No 219
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.90 E-value=1.6e-22 Score=198.80 Aligned_cols=255 Identities=15% Similarity=0.094 Sum_probs=180.5
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE---ecChHHHHHHHHHhhcCCCCeEEEcC-CCCcChHH------
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV---TAGATAANELLTFILADPGDALLVPT-PYYPGFDR------ 159 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~---t~G~~~ai~~~~~~l~~~gd~Vl~~~-p~y~~~~~------ 159 (442)
.|++. |...|++.+|++++ .+..++ ++|+++++..++.+++++||+|++++ |.|..+..
T Consensus 69 ~y~~~-~~~~Le~~lA~l~g----------~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~ 137 (427)
T 3i16_A 69 GYGDI-GRDSLDAVYARVFN----------TESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITE 137 (427)
T ss_dssp CTTCH-HHHHHHHHHHHHHT----------CSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSC
T ss_pred CCCHH-HHHHHHHHHHHHhC----------CcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccc
Confidence 45554 67888888888875 233355 78889999999999999999999999 99988763
Q ss_pred -----hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeC----CCCCCCcCCCHHHHHHHHHHHH
Q 046900 160 -----DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITN----PSNPLGATIQRSVLEELLDFAT 230 (442)
Q Consensus 160 -----~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~----P~NPtG~~~~~~~l~~l~~~~~ 230 (442)
.++ ..|++++.++++++ +.+|++++++++++ ..++|+|++++ |+||||.+ .++++|+++|+
T Consensus 138 ~~~~~~l~-~~G~~~~~v~~~~~--g~~D~e~l~~~l~~----~~~tklV~i~~s~~~p~nptg~i---~dl~~i~~la~ 207 (427)
T 3i16_A 138 NSNMGSLK-EFGINYKQVDLKED--GKPNLEEIEKVLKE----DESITLVHIQRSTGYGWRRALLI---EDIKSIVDCVK 207 (427)
T ss_dssp CCSSCCTG-GGTCEEEECCCCTT--SSCCHHHHHHHHHT----CTTEEEEEEECSCCSSSSCCCCH---HHHHHHHHHHH
T ss_pred cchHHHHH-HcCCEEEEecCccC--CCcCHHHHHHHhhC----CCCCEEEEEEcCCCCCCCCcccH---HHHHHHHHHHH
Confidence 344 37999999998754 46899999999972 12789999999 99999876 56999999999
Q ss_pred h--cCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcc-c
Q 046900 231 R--KNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMS-S 306 (442)
Q Consensus 231 ~--~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~-~ 306 (442)
+ +|+++|+|++|+.+.+...+. .. +..++++|+||.+|.+| .+.||+++ ++.+.+.++... .
T Consensus 208 ~~~~g~~livD~a~~~~~~~~~p~----~~---------gaDiv~~S~sK~lgg~g~~~gG~i~~-~~~li~~l~~~~~~ 273 (427)
T 3i16_A 208 NIRKDIICFVDNCYGEFMDTKEPT----DV---------GADLIAGSLIKNIGGGIAPTGGYLAG-TKDCIEKTSYRLTV 273 (427)
T ss_dssp HHCTTSEEEEECTTTTTSSSSCGG----GG---------TCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHHHHHSC
T ss_pred HhCCCCEEEEECCCccccccCCcc----cc---------CCeEEEecCcccCCCCCCceEEEEEE-CHHHHHHHHHhccc
Confidence 9 999999999999876433211 11 33488999999998555 67799998 566666665422 1
Q ss_pred c--CC-CcH-HH-HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc----eEEEEEecCCccccc
Q 046900 307 F--TL-ISS-QT-QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA----GLFCWMNLSPLLEEQ 377 (442)
Q Consensus 307 ~--~~-~s~-~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~----g~~~~~~~~~~~~~~ 377 (442)
. +. +++ .. ...+...+ +.+..+.++..+++..+.+.|+++|+++.+..+ .+.+.+.+..
T Consensus 274 ~~~g~~~~~~~~~a~~~l~gl-------~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~~i~~i~l~~----- 341 (427)
T 3i16_A 274 PGIGGECGSTFGVVRSMYQGL-------FLAPHISMEALKGAILCSRIMELAGFEVMPKYDEKRSDIIQSIKFND----- 341 (427)
T ss_dssp TTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCEEEECSS-----
T ss_pred CccCccCCccHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCccEEEEEEECC-----
Confidence 1 11 111 11 12222221 124556777888889999999999988855322 2255555543
Q ss_pred ChhhHHHHHHHHHHc
Q 046900 378 TREGELALWDSMLHE 392 (442)
Q Consensus 378 ~~~~~~~l~~~l~~~ 392 (442)
.+...++++.|...
T Consensus 342 -~~~~~~f~~~l~~~ 355 (427)
T 3i16_A 342 -KDKLIEFCKGIQTG 355 (427)
T ss_dssp -HHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHhhc
Confidence 22466777777554
No 220
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.89 E-value=3.3e-22 Score=196.56 Aligned_cols=253 Identities=15% Similarity=0.112 Sum_probs=179.1
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhCCCCccCCCcEEE---ecChHHHHHHHHHhhcCCCCeEEEcC-CCCcChH-------
Q 046900 90 LFQDYHGLKSFRQAMASFMEQIRGGRAKFDLNRIVV---TAGATAANELLTFILADPGDALLVPT-PYYPGFD------- 158 (442)
Q Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~---t~G~~~ai~~~~~~l~~~gd~Vl~~~-p~y~~~~------- 158 (442)
.|+++ |...|++.+|++++ .+..++ ++|+++++..++.++++|||+|++++ |.|..+.
T Consensus 70 ~Y~~~-g~~~Le~~lA~l~g----------~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~ 138 (427)
T 3hvy_A 70 GYNDI-GRDSLDRVYANIFN----------TESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDD 138 (427)
T ss_dssp CTTCH-HHHHHHHHHHHHHT----------CSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCT
T ss_pred CCCch-hHHHHHHHHHHHhC----------CCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhcccc
Confidence 46555 67888888888875 344566 78889999999999999999999999 9998876
Q ss_pred ----HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeC----CCCCCCcCCCHHHHHHHHHHHH
Q 046900 159 ----RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITN----PSNPLGATIQRSVLEELLDFAT 230 (442)
Q Consensus 159 ----~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~----P~NPtG~~~~~~~l~~l~~~~~ 230 (442)
..++ ..|++++.+++ + ++.+|++++++++++ ..++|+|++++ |+||||.+ .++++|+++|+
T Consensus 139 ~~~~~~l~-~~G~~~~~v~~-~--~~~~d~e~l~~~i~~----~~~tklV~i~~s~gyp~nptg~v---~dl~~i~~ia~ 207 (427)
T 3hvy_A 139 SKKVGSLR-EYGVKYKMVDL-K--DGKVDINTVKEELKK----DDSIKLIHIQRSTGYGWRKSLRI---AEIAEIIKSIR 207 (427)
T ss_dssp TCCSCCTG-GGTCEEEECCC-B--TTBCCHHHHHHHHHH----CTTEEEEEEESSCCSSSSCCCCH---HHHHHHHHHHH
T ss_pred chhhhHHH-HcCCEEEEecC-C--CCCcCHHHHHHHhhC----CCCCEEEEEECCCCCCCCccccH---HHHHHHHHHHH
Confidence 3345 37999999988 2 457999999999973 12889999999 99999876 56999999999
Q ss_pred h--cCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHHcc-c
Q 046900 231 R--KNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMS-S 306 (442)
Q Consensus 231 ~--~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~-~ 306 (442)
+ +|+++|+|++|+.+.+...+. .. +..++++|+||.+|.+| .+.||+++ ++.+.+.++... .
T Consensus 208 ~~~~g~~livD~a~~~~~~~~~p~----~~---------gaDiv~~S~sK~lgg~g~~~GG~i~~-~~~li~~l~~~~~~ 273 (427)
T 3hvy_A 208 EVNENVIVFVDNCYGEFVEEKEPT----DV---------GADIIAGSLIKNIGGGIATTGGYIAG-KEEYVTQATFRVTV 273 (427)
T ss_dssp HHCSSSEEEEECTTCTTTSSSCGG----GG---------TCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHHHHHSC
T ss_pred HhCCCCEEEEECCccccccCCCCc----cc---------CCeEEEECCcccccccccceEEEEEE-CHHHHHHHHHHhhc
Confidence 9 899999999999876433221 11 33488999999997444 56699998 566766665532 1
Q ss_pred cCC---CcH-HH-HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc----eEEEEEecCCccccc
Q 046900 307 FTL---ISS-QT-QYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKGNA----GLFCWMNLSPLLEEQ 377 (442)
Q Consensus 307 ~~~---~s~-~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~----g~~~~~~~~~~~~~~ 377 (442)
... .++ +. ..++...+. .+..+.++..++..++.+.|+++|+++.+..+ .+.+.+.+..
T Consensus 274 ~~~g~~~~~~~~~a~~~~~gl~-------~~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~li~~~~l~~----- 341 (427)
T 3hvy_A 274 PGIGGECGSTFGVMRSLYEGLF-------MAPHVTIEAVKGAVFCARIMELAGFDVLPKYNDKRTDIIQAIKFND----- 341 (427)
T ss_dssp TTTGGGCCCCTTCHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSEEEEECSS-----
T ss_pred CCcccccCCCHHHHHHHHHhHh-------HHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCceEEEEEeCCC-----
Confidence 111 111 22 222222221 23456667788889999999999988755322 2255566643
Q ss_pred ChhhHHHHHHHHHH
Q 046900 378 TREGELALWDSMLH 391 (442)
Q Consensus 378 ~~~~~~~l~~~l~~ 391 (442)
.+...++++.|..
T Consensus 342 -~~~~~~f~~~l~~ 354 (427)
T 3hvy_A 342 -EKKLIDFIKGIQT 354 (427)
T ss_dssp -HHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhcc
Confidence 1245677777754
No 221
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.89 E-value=1.5e-22 Score=202.94 Aligned_cols=347 Identities=13% Similarity=0.146 Sum_probs=213.8
Q ss_pred CCCCCceeeeeccccc--c--cHHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLAENQ--V--SFDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~~n~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+|||..+... + .++.+.+.+.+....... .....|+. ....++++++++.+.+..+ ..
T Consensus 59 d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~-------~~~~~~~~-~~~~~l~~~la~~l~~~~~----~~ 126 (472)
T 1ohv_A 59 DVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTF-------INRPALGI-LPPENFVEKLRESLLSVAP----KG 126 (472)
T ss_dssp BTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHH-------HCCCCTTT-SCBTTHHHHHHHTGGGGCC----TT
T ss_pred eCCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccc-------cccccccc-ccHHHHHHHHHHHHHHhCC----CC
Confidence 3455678999776432 3 345566655543211000 00012332 2347899999997775432 35
Q ss_pred CCcEEEecChHHHHHHHHHhhc--------C-----------------CC---CeEEEcCCCCcChHHhHhhhcCcE---
Q 046900 120 LNRIVVTAGATAANELLTFILA--------D-----------------PG---DALLVPTPYYPGFDRDLRWRTGIK--- 168 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~--------~-----------------~g---d~Vl~~~p~y~~~~~~~~~~~G~~--- 168 (442)
.++|++++|+++|+..+++++. . +| +.|++.+++|.++...+....|..
T Consensus 127 ~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~ 206 (472)
T 1ohv_A 127 MSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIH 206 (472)
T ss_dssp CCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHH
T ss_pred cCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCcccc
Confidence 7899999999999999998773 1 45 899999999988765443123321
Q ss_pred ----------EEEEecCC---CCC--C-----cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCc-CCCHHHHHHHHH
Q 046900 169 ----------IVPIHCDS---SNN--F-----QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGA-TIQRSVLEELLD 227 (442)
Q Consensus 169 ----------v~~v~~~~---~~~--~-----~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l~~ 227 (442)
.+++|... ... + ..|++.|++.++++...+.++++|++...+|+||. +.+.+.+++|.+
T Consensus 207 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~ 286 (472)
T 1ohv_A 207 KIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRD 286 (472)
T ss_dssp HTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHH
T ss_pred ccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHH
Confidence 11222100 000 0 12678899888764322225776666555788996 567889999999
Q ss_pred HHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHcc--
Q 046900 228 FATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS-- 305 (442)
Q Consensus 228 ~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~-- 305 (442)
+|++||+++|+||+|..+.+.+. +..+..+. . ...+-+.||||++ +.| ||++ ++.+.. +....
T Consensus 287 l~~~~g~lli~DEv~~g~g~~g~-~~~~~~~g------v-~~~~Di~t~sK~~-l~G---G~~~--~~~~~~-~~~~~~~ 351 (472)
T 1ohv_A 287 ISRKHGCAFLVDEVQTGGGSTGK-FWAHEHWG------L-DDPADVMTFSKKM-MTG---GFFH--KEEFRP-NAPYRIF 351 (472)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSS-SSGGGGGC------C-SSCCSEEEECGGG-SSE---EEEE--CGGGSC-SSSSSSC
T ss_pred HHHHhCCEEEEeCcccCCCCCCC-chhccccC------C-CCCCCEEEEcccc-ccC---CccC--chhhcc-ccccccc
Confidence 99999999999999987655443 11221110 0 0002245899995 345 7776 333321 11111
Q ss_pred ccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC--C----CeeecCCceEEEEEecCCcccccCh
Q 046900 306 SFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA--G----IECLKGNAGLFCWMNLSPLLEEQTR 379 (442)
Q Consensus 306 ~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g----~~~~~~~~g~~~~~~~~~~~~~~~~ 379 (442)
..+..+++++.++.+.|+.. .+ ....++++++++++.+.|++. + +....+.+ ++++++++..
T Consensus 352 ~T~~~~~~~~aaa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g-~~~~~~~~~~------ 419 (472)
T 1ohv_A 352 NTWLGDPSKNLLLAEVINII---KR--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRG-TFCSFDTPDE------ 419 (472)
T ss_dssp CSSSSCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEET-TEEEEECSSH------
T ss_pred CccCccHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCc-eEEEEEeCCh------
Confidence 22345788888877776521 11 123455666666666666543 1 33344554 4667777541
Q ss_pred hhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHH
Q 046900 380 EGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQK 436 (442)
Q Consensus 380 ~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~ 436 (442)
....+++..|+++ ||.+.|+. .+++|++++ ..+++++++++++|.+++++
T Consensus 420 ~~~~~~~~~l~~~-Gv~~~~~g------~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 420 SIRNKLISIARNK-GVMLGGCG------DKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp HHHHHHHHHHHHT-TEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHC-CeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1356888899876 99999852 468999776 34899999999999998865
No 222
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.82 E-value=5.6e-25 Score=218.44 Aligned_cols=336 Identities=13% Similarity=0.079 Sum_probs=209.9
Q ss_pred CCCCCceeeeeccccc--cc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCCCccC
Q 046900 44 STNPSGVIQMGLAENQ--VS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGRAKFD 119 (442)
Q Consensus 44 ~~~~~~~i~l~~~~n~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 119 (442)
+.....+|||..+... ++ ++.+.+.+.+..... ....|+. ....+|.+.|++++. .
T Consensus 96 D~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~----------~~~~~~~-~~~~~Lae~L~~~~p---------~ 155 (465)
T 2yky_A 96 DVDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVG----------LNLSTQT-ENEALFAEAVCDRFP---------S 155 (465)
Confidence 3445678898876543 32 344555444433210 0122322 233566666666542 2
Q ss_pred CCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHh---hhcCc--EEEEEecCCCCCCcCCHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLR---WRTGI--KIVPIHCDSSNNFQITPQALEAAYK 192 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~---~~~G~--~v~~v~~~~~~~~~~d~~~l~~~l~ 192 (442)
.+.+++++++++++..+++.+. ..++.|++.+++|.++...+. ...|+ .++.+|. .|++.|++.++
T Consensus 156 ~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~ 228 (465)
T 2yky_A 156 IDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLK 228 (465)
Confidence 5789999999999999988752 345899999999987654332 01233 3333332 26889999887
Q ss_pred HHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEE
Q 046900 193 EAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVH 271 (442)
Q Consensus 193 ~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi 271 (442)
+. +.++++|++...+|+||.+. +.+.+++|.++|++||+++|+||+|. +.. +. ....... +...
T Consensus 229 ~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~-~~a~~~~---------gv~p 293 (465)
T 2yky_A 229 RH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SG-GGAQEML---------GISA 293 (465)
Confidence 42 12677666654356699655 57789999999999999999999999 632 22 1111111 2222
Q ss_pred EEecCcccCCCCCceeEEEeecCHHHHHHHHH-------ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Q 046900 272 IVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-------MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQ 344 (442)
Q Consensus 272 ~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (442)
-+.||||.+| .|+|+||++++ +.+.+.+.. ....+..++++|.++.+.|+... + ....++++++.+
T Consensus 294 Di~t~sK~lg-~G~piG~v~~~-~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~---~--~~~~~~~~~~~~ 366 (465)
T 2yky_A 294 DLTTLGKYIG-GGMSFGAFGGR-RDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIY---T--RQAASDLSASGD 366 (465)
Confidence 3558999999 69999999984 556655544 12234567888888877765321 1 123344445555
Q ss_pred HHHHHHHhC----CCeeecCCceEEEEEecCC-ccc---c---cChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEE
Q 046900 345 MIIEGLRSA----GIECLKGNAGLFCWMNLSP-LLE---E---QTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRV 413 (442)
Q Consensus 345 ~l~~~L~~~----g~~~~~~~~g~~~~~~~~~-~~~---~---~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRl 413 (442)
++.+.|++. ++....+..|.++|+.+.+ ... . ........++..|+++ ||.+.|+. |. . +
T Consensus 367 ~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~-GV~v~p~~-~~----~---~ 437 (465)
T 2yky_A 367 RFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRK-GIYLAPRG-MY----A---L 437 (465)
Confidence 555555443 3333345667788888764 110 0 0011245788888876 99999975 32 1 6
Q ss_pred EeecCCHHHHHHHHHHHHHHHHHHH
Q 046900 414 CFANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 414 s~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
++.. +++++++++++|.+++++.+
T Consensus 438 s~~~-t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 438 SLEI-ADAGRDAFAEALADFIGEQR 461 (465)
Confidence 6655 89999999999999987653
No 223
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.88 E-value=3.9e-22 Score=207.71 Aligned_cols=311 Identities=12% Similarity=0.046 Sum_probs=196.8
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh-HhhhcCcEEEEEec
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD-LRWRTGIKIVPIHC 174 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~~G~~v~~v~~ 174 (442)
-..++++.+|++++ .+ ..+++++|+++++..++.+++++||.|+++.|+|..+... +.. .|++++.++.
T Consensus 174 ~i~e~e~~lA~~~g--------ae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l-~Ga~~v~v~~ 243 (730)
T 1c4k_A 174 PAVAAEKHAARVYN--------AD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAM-AGGRPVYLQT 243 (730)
T ss_dssp HHHHHHHHHHHHTT--------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTT-TCCEEEEECE
T ss_pred HHHHHHHHHHHHHC--------CC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHH-CCCEEEEEeC
Confidence 35788888888875 22 3588999999999999999999999999999999988887 774 8999998887
Q ss_pred CCCCCCc----CCHHHH-----HHHHHHHHhc---CCce-eEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 175 DSSNNFQ----ITPQAL-----EAAYKEAESK---DMRV-RGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 175 ~~~~~~~----~d~~~l-----~~~l~~~~~~---~~~~-~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
+.+ .|. +|+++| ++++++.... ..++ +++++++| ||+|.+.+ +++|+++|+++++++++||+
T Consensus 244 ~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeA 318 (730)
T 1c4k_A 244 NRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSA 318 (730)
T ss_dssp EEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECT
T ss_pred Ccc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEcc
Confidence 532 333 688888 7776531000 1112 88999999 58999987 78899999999999999999
Q ss_pred CCcC-CCCCCCc-ccHHHHHhhhcCCCCCcEEEEecCcccCCCCCcee-EEEeecCHHH--------HHHHHH---cccc
Q 046900 242 YSGS-AFSSSEF-VSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRV-GTIYSYNDKV--------VTTARR---MSSF 307 (442)
Q Consensus 242 y~~~-~~~~~~~-~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~Ri-G~i~~~~~~~--------~~~~~~---~~~~ 307 (442)
|+.. .|++... .+..... ..+ .+..+++++.|+||++ +|++. |+++++++.+ ...++. ....
T Consensus 319 h~~~~~f~~~~~g~~~l~~~-~~g-~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~s 394 (730)
T 1c4k_A 319 WVGYEQFIPMMRNSSPLLID-DLG-PEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMS 394 (730)
T ss_dssp TCCGGGSSGGGGGGCTTSCC-CCC-TTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSC
T ss_pred cccccccCcccCCcCccccc-ccC-CCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCC
Confidence 9752 3322100 0111010 000 0134679999999986 55554 5664433322 112221 1111
Q ss_pred CCCcHHHHHHHH---HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh--CCCeeecCCc--------------------
Q 046900 308 TLISSQTQYLLA---SMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS--AGIECLKGNA-------------------- 362 (442)
Q Consensus 308 ~~~s~~~q~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~-------------------- 362 (442)
...+.+...++. .++... .-.+..+++.++.+.+.+.|.+ .|+++..++.
T Consensus 395 tsp~~~~iaal~aA~~~l~~~-----~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~ 469 (730)
T 1c4k_A 395 TSPFYPMYAALDVNAAMQEGE-----AGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDY 469 (730)
T ss_dssp SSCCHHHHHHHHHHHHHHSHH-----HHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGG
T ss_pred CCCcHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchh
Confidence 233333333322 223221 1233445566667777788877 3777654321
Q ss_pred -----------------e-EE-----EEEecCCcc------cccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEE
Q 046900 363 -----------------G-LF-----CWMNLSPLL------EEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRV 413 (442)
Q Consensus 363 -----------------g-~~-----~~~~~~~~~------~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRl 413 (442)
+ ++ +.+.++... ...+ ..+.++.+.|.++ ||.+... +...+|+
T Consensus 470 ~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g-~~~~~l~~~L~e~-GI~v~~~------~~~~ir~ 541 (730)
T 1c4k_A 470 WRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFG-VPATIVANYLRDH-GIIPEKS------DLNSILF 541 (730)
T ss_dssp GBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSC-CCHHHHHHHHHHT-TCCCSEE------CSSEEEE
T ss_pred hccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccC-CCHHHHHHHHHHC-CcEEEEC------CCCeEEE
Confidence 1 12 445554210 0001 1367788888776 9987652 2467888
Q ss_pred Eee-cCCHHHHHHHHHHHHHHHHHHH
Q 046900 414 CFA-NMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 414 s~~-~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
+++ ..++++++.+++.|.++.+.+.
T Consensus 542 ~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 542 LMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 876 2388999999999999987764
No 224
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.88 E-value=7.9e-21 Score=187.62 Aligned_cols=254 Identities=15% Similarity=0.103 Sum_probs=173.9
Q ss_pred HHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcC-CCCcChHHhHhh---------hcCcEEE
Q 046900 101 RQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPT-PYYPGFDRDLRW---------RTGIKIV 170 (442)
Q Consensus 101 r~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~-p~y~~~~~~~~~---------~~G~~v~ 170 (442)
++++++++.+.+| .+....+++++ ++++++..++.+++++||.|+++. |.|..+...+.. ..|++++
T Consensus 67 ~~~l~~~la~~~g--~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~ 143 (431)
T 3ht4_A 67 RDTLEKVYADVFG--AEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYN 143 (431)
T ss_dssp HHHHHHHHHHHTT--CSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEE
T ss_pred HHHHHHHHHHHhC--CCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEE
Confidence 5555555555544 11112233355 668999999999999999999998 999998854421 3799999
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEe-CCCCCCCcCCCHHHHHHHHHHHHh--cCcEEEEeccCCcCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLIT-NPSNPLGATIQRSVLEELLDFATR--KNIHLVSDEIYSGSAF 247 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~-~P~NPtG~~~~~~~l~~l~~~~~~--~~~~vi~De~y~~~~~ 247 (442)
.++++++ +.+|+++|++++++ ++++|+++ +|+||+|..++.+++++|+++|++ +|+++|+||+|+.+.+
T Consensus 144 ~v~~~~~--~~~d~e~l~~~l~~------~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~ 215 (431)
T 3ht4_A 144 AVPLTEG--GLVDFEAVAAAIHS------NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIE 215 (431)
T ss_dssp ECCBCTT--SSBCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSS
T ss_pred EeCCCCC--CCcCHHHHHhhcCC------CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhcc
Confidence 9998763 67999999999864 88999999 599999999999999999999999 9999999999998776
Q ss_pred CCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCC-CCceeEEEeecCHHHHHHHHHcccc---C-CC-cHHH-HHHHHH
Q 046900 248 SSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGL-PGFRVGTIYSYNDKVVTTARRMSSF---T-LI-SSQT-QYLLAS 320 (442)
Q Consensus 248 ~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~-~G~RiG~i~~~~~~~~~~~~~~~~~---~-~~-s~~~-q~~~~~ 320 (442)
+..+. . + +..++++|+||.+|. .+...||+++ ++.+.+.++..... + .. +++. ..++..
T Consensus 216 ~~~~~-~---~---------g~Di~~~S~sK~lgg~~~~~GG~v~~-~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~ 281 (431)
T 3ht4_A 216 EQEPC-H---V---------GADLMAGSLIKNPGGGIVKTGGYIVG-KEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQ 281 (431)
T ss_dssp SCCGG-G---T---------TCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHH
T ss_pred CCCcc-c---c---------CCeEEEcCccccCCCCCCCceEEEEe-cHHHHHHHHHHhccCCcccccCccHHHHHHHHh
Confidence 43321 1 1 234889999999652 1133499999 56666665542211 1 01 1111 222222
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC----CceEEEEEecCCcccccChhhHHHHHHHHHHc
Q 046900 321 MLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLKG----NAGLFCWMNLSPLLEEQTREGELALWDSMLHE 392 (442)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 392 (442)
.+. .+....++..++.+++.+.|++.|+++.+. ..++.+.+.+++. +...++++.|.+.
T Consensus 282 ~l~-------~~~~~~~~~~~~a~~l~~~L~~~g~~v~p~~~~~~~~li~~i~l~~~------~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 282 GFF-------LAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRTDLIQSVQFDDK------DRMIAFCQAIQYA 344 (431)
T ss_dssp HHH-------HHHHHHHHHHHHHHHHHHHHHHHTCCEESCTTSCCSSSCCEEECCCH------HHHHHHHHHHHHT
T ss_pred Hhh-------hHHHHHHHHHHHHHHHHHHHHhCcCEecCCCCCCCccEEEEEEeCCH------HHHHHHHHHHHhc
Confidence 221 234456677788888999999888877542 2333555666531 2466788877654
No 225
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.86 E-value=1.9e-20 Score=196.77 Aligned_cols=177 Identities=18% Similarity=0.170 Sum_probs=131.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS 176 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~ 176 (442)
..++++.++++++ . .+.+++++|+++++..++.+++++||.|+++.|+|.++...+.. .|++++.++.+.
T Consensus 207 v~~~ee~la~l~G--------~-d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~-~G~~~v~v~~~~ 276 (755)
T 2vyc_A 207 FGESEKYAARVFG--------A-DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLML-TGAKPVYMVPSR 276 (755)
T ss_dssp HHHHHHHHHHHHT--------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHH-HCCEEEEECCCB
T ss_pred HHHHHHHHHHHhC--------C-CceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHH-cCCEEEEEeCCC
Confidence 5677777777765 2 24588999999999999999999999999999999999888885 899999998764
Q ss_pred CCCCc----C-----CHHHHHHHHHHHH----hcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCC
Q 046900 177 SNNFQ----I-----TPQALEAAYKEAE----SKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 177 ~~~~~----~-----d~~~l~~~l~~~~----~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
+ .|. + |++.|++++++.. ..+.++++++++|| ||||.+.+ +++|+++|++|++++++||+|+
T Consensus 277 ~-~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~ 351 (755)
T 2vyc_A 277 N-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWY 351 (755)
T ss_dssp C-TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTC
T ss_pred C-ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCc
Confidence 3 333 4 9999999997621 12334468999998 79999987 7888999999999999999998
Q ss_pred cCC-CCCC--CcccHHHHH--hhhcCCCCCcEEEEecCcccCCCCCce-eEEEeecCH
Q 046900 244 GSA-FSSS--EFVSIAEIL--EARQYKDSERVHIVYSLSKDLGLPGFR-VGTIYSYND 295 (442)
Q Consensus 244 ~~~-~~~~--~~~s~~~~~--~~~~~~~~~~vi~~~S~SK~~g~~G~R-iG~i~~~~~ 295 (442)
... ++.. +..++ .. .+ ...++++++.|+||++ +|++ .|+++++++
T Consensus 352 ~~~~~~~~~~~~~~~--~g~~aD---~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~ 402 (755)
T 2vyc_A 352 GYARFNPIYADHYAM--RGEPGD---HNGPTVFATHSTHKLL--NALSQASYIHVREG 402 (755)
T ss_dssp TTGGGCGGGTTSSSS--CSCCCC---CSSBEEEEEEETTTSS--SCCTTCEEEEEECC
T ss_pred hhcccCcccCCcchh--cCCcCC---ccCCCeEEEECccccc--cCcCCeeeeeecCc
Confidence 532 2211 11111 11 01 0135788999999986 5665 577766443
No 226
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.80 E-value=5.3e-19 Score=182.70 Aligned_cols=175 Identities=17% Similarity=0.163 Sum_probs=126.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS 176 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~ 176 (442)
..++++.+|++++ ....+++++|++.++..++.+++++||.|+++.++|.++...+.. .|++++.++.+.
T Consensus 197 i~eaE~~lA~~fG---------a~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~l-sGa~pv~v~~~~ 266 (715)
T 3n75_A 197 HKEAEQYIARVFN---------ADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMM-SDVTPIYFRPTR 266 (715)
T ss_dssp HHHHHHHHHHHHT---------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHH-SCCEEEEECCCB
T ss_pred HHHHHHHHHHHhC---------CCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHH-cCCEEEEEeccc
Confidence 5788888999876 134578889989999999999999999999999999999998885 999999998764
Q ss_pred CCCCcC---------CHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCC-
Q 046900 177 SNNFQI---------TPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSA- 246 (442)
Q Consensus 177 ~~~~~~---------d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~- 246 (442)
+ .|.+ |++.|++++++... ...++++++++| ||+|.+++ +++|+++|+++ .+++||+|+...
T Consensus 267 ~-~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~--~livDEAH~~~~~ 338 (715)
T 3n75_A 267 N-AYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVK--SIHFDSAWVPYTN 338 (715)
T ss_dssp C-TTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCS--EEEEECTTCTTGG
T ss_pred c-ccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCC---HHHHHHHhCcC--cEEEccccccccc
Confidence 3 4554 89999999986321 012348999999 99999998 56667777665 379999998643
Q ss_pred CCCCCcccHHHHHhhhcCCCCCcE-EEEecCcccCCCCCc-eeEEEeecCH
Q 046900 247 FSSSEFVSIAEILEARQYKDSERV-HIVYSLSKDLGLPGF-RVGTIYSYND 295 (442)
Q Consensus 247 ~~~~~~~s~~~~~~~~~~~~~~~v-i~~~S~SK~~g~~G~-RiG~i~~~~~ 295 (442)
|+. .......+... ...+.+ +++.|+||+++ |+ ..||++++++
T Consensus 339 f~~-~~~~~~al~~g---~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~ 383 (715)
T 3n75_A 339 FSP-IYEGKCGMSGG---RVEGKVIYETQSTHKLLA--AFSQASMIHVKGD 383 (715)
T ss_dssp GSG-GGTTSSTTSSS---CCTTCEEEEEECHHHHSS--CCTTCEEEEEESC
T ss_pred cCC-ccccccccccC---cCCCEEEEEEeccccccc--CCCCeeEEEeCch
Confidence 321 11100011000 002443 56899999974 43 4688888554
No 227
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.76 E-value=9.1e-18 Score=162.01 Aligned_cols=289 Identities=13% Similarity=0.101 Sum_probs=188.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCC-CcEEE-ecChHHHHHHHHHhhcCC--CCeEEEcCCCCcC--hHHhHhhhcCcEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDL-NRIVV-TAGATAANELLTFILADP--GDALLVPTPYYPG--FDRDLRWRTGIKIV 170 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~-~~i~~-t~G~~~ai~~~~~~l~~~--gd~Vl~~~p~y~~--~~~~~~~~~G~~v~ 170 (442)
+.+.|+.++++++ +++ ++|++ |.|+|+++++++..++.+ ||+|++..-++.. +...++ ..|..++
T Consensus 60 ~~~ar~~la~ll~--------~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~-~~G~~~~ 130 (377)
T 3e77_A 60 INNTENLVRELLA--------VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAK-KFGTINI 130 (377)
T ss_dssp HHHHHHHHHHHHT--------CCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHT-TTSEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHH-HhCCceE
Confidence 4566777777765 443 57888 578999999999998865 8998876655433 223344 3788877
Q ss_pred EEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 171 PIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 171 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
.++.+.. +..+++.++..++ +++++|.+++..|.||.+.+. +|+++++++++|.+.+- +.
T Consensus 131 ~~~~~~~--~~~~~~~~~~~i~------~~t~lV~~~h~et~tG~~~pi--------i~~~~~~~~~vD~~q~~---g~- 190 (377)
T 3e77_A 131 VHPKLGS--YTKIPDPSTWNLN------PDASYVYYCANETVHGVEFDF--------IPDVKGAVLVCDMSSNF---LS- 190 (377)
T ss_dssp CSCCCSS--SCSCCCGGGCCCC------TTCSCEEEESEETTTTEECSS--------CCCCTTCCEEEECTTTT---TS-
T ss_pred EeccCCC--cCCCCChHHhccC------CCccEEEEeCccCchheEchh--------hhccCCCEEEEEccccc---CC-
Confidence 7776543 3455666655443 378899999888999999985 36788999999999884 22
Q ss_pred CcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHH-------------HHHHHHccccCCCcHHHHHH
Q 046900 251 EFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKV-------------VTTARRMSSFTLISSQTQYL 317 (442)
Q Consensus 251 ~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~-------------~~~~~~~~~~~~~s~~~q~~ 317 (442)
.+..+.. .+ +++.|..|.+|.+| +|+++..++.+ ....+....+++.+.....+
T Consensus 191 ~~id~~~---------~~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~ 257 (377)
T 3e77_A 191 KPVDVSK---------FG--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYV 257 (377)
T ss_dssp SCCCGGG---------CS--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHH
T ss_pred CCCchhh---------cC--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHH
Confidence 2222221 13 35688999999888 57777643221 11111122234444444455
Q ss_pred HHHHhcCchhHHHH--HHHHHHHHHHHHHHHHHHHHhC-CCeeec----CCceEEEEEecCCcccccChhhHHHHHHHHH
Q 046900 318 LASMLSNKKFTENY--IKTNRERLQKRYQMIIEGLRSA-GIECLK----GNAGLFCWMNLSPLLEEQTREGELALWDSML 390 (442)
Q Consensus 318 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~ 390 (442)
+.+.++ ++.+. ++...++.++..+++.+.|++. |+...+ ..++..+.+.++.... ..+-...+...+.
T Consensus 258 l~~al~---~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~--~~~~~~~~l~~l~ 332 (377)
T 3e77_A 258 MGLVLE---WIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG--DDALEKRFLDKAL 332 (377)
T ss_dssp HHHHHH---HHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTC--CHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCC--chhHHHHHHHHHH
Confidence 555544 33332 6777888889999999999987 776432 1234455566664211 0001135666665
Q ss_pred HcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHH
Q 046900 391 HEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 391 ~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~ 437 (442)
++ ||.+++|... .+.+|+|+.. .++++++.+++.|+++++++
T Consensus 333 ~~-Gi~~~~g~~~----~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 333 EL-NMLSLKGHRS----VGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp HT-TEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HC-CcEEeCCCCc----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 55 9999988632 3569999973 38999999999999998775
No 228
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.75 E-value=5.5e-17 Score=155.97 Aligned_cols=330 Identities=13% Similarity=0.167 Sum_probs=198.1
Q ss_pred CCCceeeeecccccccHHHHHHHHHhCCCCcccCCCCCCCCcccccCC--CcchHHHHHHHHHHHHHHhCCCCccC-CCc
Q 046900 46 NPSGVIQMGLAENQVSFDLLEEYLEQQPEASTWGKGAPGFRENALFQD--YHGLKSFRQAMASFMEQIRGGRAKFD-LNR 122 (442)
Q Consensus 46 ~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~-~~~ 122 (442)
|+..+++|+.+..+++.+.++............+ .+ .....+... ..-+.+.|+.++++++ ++ +++
T Consensus 2 ~~~~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~--~s-~~~~~hr~~~~~~~~~~~r~~la~ll~--------~~~~~~ 70 (361)
T 3m5u_A 2 NAMRKINFSAGPSTLPLEILEQAQKELCDYQGRG--YS-IMEISHRTKVFEEVHFGAQEKAKKLYE--------LNDDYE 70 (361)
T ss_dssp --CCCEECCSSSCCCCHHHHHHHHHTSSSGGGSS--SC-GGGSCSSSHHHHHHHHHHHHHHHHHHT--------CCTTEE
T ss_pred CccceEeecCCCCCCcHHHHHHHHHHHHhcccCC--ce-eeccCCCCHHHHHHHHHHHHHHHHHhC--------CCCCce
Confidence 3446678887777776655554443332110000 00 000000000 1224566777777765 43 457
Q ss_pred EEE-ecChHHHHHHHHHhhcCCCCeEEEcCC-CCcC-hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 123 IVV-TAGATAANELLTFILADPGDALLVPTP-YYPG-FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 123 i~~-t~G~~~ai~~~~~~l~~~gd~Vl~~~p-~y~~-~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
|++ |+|+|+++++++..++ +||++++..- .|.. +...++ ..|+++..++.++.+.+.++++. + +++
T Consensus 71 v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~-~~G~~v~~~~~~~~g~~~~~~~~-~--l~~------ 139 (361)
T 3m5u_A 71 VLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQ-ILGVNVKTVASSEESNFDHIPRV-E--FSD------ 139 (361)
T ss_dssp EEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHH-HTTCCEEEEEECTTTTSCSCCCC-C--CCT------
T ss_pred EEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHH-HcCCceEEEecccCcCCCcCChh-h--cCC------
Confidence 887 9999999999999988 8886532222 2211 223344 37999999998876544345554 3 543
Q ss_pred ceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCccc
Q 046900 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKD 279 (442)
Q Consensus 200 ~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~ 279 (442)
++++|.+++..|.||.+.+. +++ +++++++|.+.+- +.. +..+.. .-+++.|..|.
T Consensus 140 ~t~lv~~~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~---g~~-~id~~~-----------~d~~~~s~~K~ 195 (361)
T 3m5u_A 140 NADYAYICSNNTIYGTQYQN--------YPK-TKTPLIVDASSDF---FSR-KVDFSN-----------IALFYGGVQKN 195 (361)
T ss_dssp TSSEEEEESEETTTTEECSS--------CCC-CSSCEEEECGGGT---TSS-CCCCTT-----------EEEEEEETTTT
T ss_pred CCCEEEEeCCCCCcceeCCc--------ccc-cCCEEEEEccccc---CCC-CCCccc-----------CCEEEEechhc
Confidence 78899999888999998772 333 4999999999874 221 222211 12567899999
Q ss_pred CCCCCceeEEEeecCHHHHHHHHH---------------ccccCCCcHHHHHHHHHHhcCchhHHHH--HHHHHHHHHHH
Q 046900 280 LGLPGFRVGTIYSYNDKVVTTARR---------------MSSFTLISSQTQYLLASMLSNKKFTENY--IKTNRERLQKR 342 (442)
Q Consensus 280 ~g~~G~RiG~i~~~~~~~~~~~~~---------------~~~~~~~s~~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~ 342 (442)
+|.+| +|+++.. +.+.+.+.. ...+++.+.....++.+.++ ++.+. ++...++.++.
T Consensus 196 ~gp~G--~g~l~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~---~l~~~gG~~~i~~~~~~l 269 (361)
T 3m5u_A 196 AGISG--LSCIFIR-KDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMD---WLLNQGGLDKVHEKNSQK 269 (361)
T ss_dssp SSCTT--CEEEEEE-HHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHH---HHHTTTCHHHHHHHHHHH
T ss_pred cCCCc--cEEEEEc-HHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHH---HHHHccCHHHHHHHHHHH
Confidence 99777 6888884 443333221 11123334444444444443 22222 56777888888
Q ss_pred HHHHHHHHHhCC-C-eeec-C--CceEEEEEecCCcccccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEeec
Q 046900 343 YQMIIEGLRSAG-I-ECLK-G--NAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFAN 417 (442)
Q Consensus 343 ~~~l~~~L~~~g-~-~~~~-~--~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~~ 417 (442)
++++.+.|++.+ + .... + .....+.+.+++.. .. ..++...| +++||.+++|... .+.+|+|+..
T Consensus 270 ~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~---~~--~~~~~~~L-~~~gI~~~~g~~~----~g~iRiS~~~ 339 (361)
T 3m5u_A 270 ATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNK---DL--EPLFVKEA-EEAGMIGLKGHRI----LGGIRASIYN 339 (361)
T ss_dssp HHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCT---TH--HHHHHHHH-HHTTEECCBCCTT----TCSEEEECCT
T ss_pred HHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCch---hh--hHHHHHHH-HHCCCEEecCCCc----cCeEEEEccC
Confidence 999999998875 5 4432 1 22334555665410 11 23566666 4459999887542 2459999973
Q ss_pred -CCHHHHHHHHHHHHHHHHHH
Q 046900 418 -MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 418 -~~~e~i~~~l~~l~~~l~~~ 437 (442)
.++++++++++.|+++.+++
T Consensus 340 ~~t~edId~l~~al~~~~~~~ 360 (361)
T 3m5u_A 340 ALNLDQVKTLCEFMKEFQGKY 360 (361)
T ss_dssp TSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhc
Confidence 38999999999999998765
No 229
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.74 E-value=2.1e-17 Score=160.32 Aligned_cols=287 Identities=9% Similarity=0.056 Sum_probs=184.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCccCC-CcEEE-ecChHHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEE
Q 046900 96 GLKSFRQAMASFMEQIRGGRAKFDL-NRIVV-TAGATAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVP 171 (442)
Q Consensus 96 g~~~lr~~ia~~l~~~~~~~~~~~~-~~i~~-t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~ 171 (442)
-+.+.|+.++++++ ++. ++|++ |+|+|+++++++..++.+||+|++..-++.. +...++ ..| ++..
T Consensus 73 ~~~~ar~~la~ll~--------~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~-~~G-~v~~ 142 (386)
T 3qm2_A 73 VAEEAEQDFRDLLN--------IPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAK-KYC-APQI 142 (386)
T ss_dssp CCHHHHHHHHHHHT--------CCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHT-TTS-EEEE
T ss_pred HHHHHHHHHHHHhC--------CCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHH-HhC-CeEE
Confidence 46789999999986 433 46888 6899999999999999999998754443332 223344 378 8888
Q ss_pred EecC-CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCC
Q 046900 172 IHCD-SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSS 249 (442)
Q Consensus 172 v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~ 249 (442)
++.+ ++.++.++++.+++.+++ ++++|.+++..|.||.+ .+.++ |. +++++++|.+.+- +.
T Consensus 143 v~~~~~~~G~~~~~~~~~~~l~~------~t~lV~~~h~et~tG~~i~pi~~---i~-----~g~~~~vDa~qs~---g~ 205 (386)
T 3qm2_A 143 IDAKITVDGKRAVKPMREWQLSD------NAAYLHYCPNETIDGIAIDETPD---FG-----PEVVVTADFSSTI---LS 205 (386)
T ss_dssp EECEEEETTEEEECCGGGCCCCT------TCSCEEECSEETTTTEECCCCCC---CC-----TTCCEEEECTTTT---TS
T ss_pred EecCcccCCCCCCchHHHhhcCC------CCcEEEEECCcCCcCEecCchhh---hc-----CCCEEEEEccccc---CC
Confidence 8876 112333566777666543 78888888888899996 66333 32 7999999999873 22
Q ss_pred CCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHH-------------HHHHHHccccCCCcHHHHH
Q 046900 250 SEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKV-------------VTTARRMSSFTLISSQTQY 316 (442)
Q Consensus 250 ~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~-------------~~~~~~~~~~~~~s~~~q~ 316 (442)
.+..+.. .+ +.+.|..|.+|.+| +|++++.++.+ ....+....+++.+.+...
T Consensus 206 -~pidv~~---------~~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~ 271 (386)
T 3qm2_A 206 -APLDVSR---------YG--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWY 271 (386)
T ss_dssp -SCCCGGG---------CS--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHH
T ss_pred -CCCCccc---------cC--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHH
Confidence 2223221 13 35688999999777 68888743321 0111111112233333444
Q ss_pred HHHHHhcCchhHHHH--HHHHHHHHHHHHHHHHHHHHhCCCe-ee-cC--CceEEEEEecCCcccccChhhHHHHHHHHH
Q 046900 317 LLASMLSNKKFTENY--IKTNRERLQKRYQMIIEGLRSAGIE-CL-KG--NAGLFCWMNLSPLLEEQTREGELALWDSML 390 (442)
Q Consensus 317 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~-~~-~~--~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~ 390 (442)
++.++++ ++.+. ++...++.++.++++.+.|++.|+- .. .+ .+...+.+.++... . ..++...|
T Consensus 272 ~l~~Al~---~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~----~--~~~~~~~L- 341 (386)
T 3qm2_A 272 LSGLVFK---WLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNT----L--DKVFLEES- 341 (386)
T ss_dssp HHHHHHH---HHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGG----G--HHHHHHHH-
T ss_pred HHHHHHH---HHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcc----c--cHHHHHHH-
Confidence 4444443 33333 6777888888999999999887652 21 11 23335556666411 1 24566665
Q ss_pred HcCcEEEeCCCCCCCCCCCEEEEEeec-CCHHHHHHHHHHHHHHHHHH
Q 046900 391 HEVKLNISPGSSCHCSEPGWFRVCFAN-MSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 391 ~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~e~i~~~l~~l~~~l~~~ 437 (442)
+++||.+++|... .+.+|+|+.. .++++++++++.|+++.+++
T Consensus 342 ~~~gI~~~~g~~~----~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 342 FAAGLHALKGHRV----VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp HHTTEECCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCEEeCCCCC----cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4559999887643 2459999973 38999999999999998764
No 230
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.73 E-value=2.1e-16 Score=155.75 Aligned_cols=280 Identities=16% Similarity=0.125 Sum_probs=168.9
Q ss_pred CCcEEEecChHHHHHHHHHhhcC--CCCeEEEcCCCCcChHHhHhhh-----cCcEEEEEecCCCCCCcCCHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWR-----TGIKIVPIHCDSSNNFQITPQALEAAYK 192 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~-----~G~~v~~v~~~~~~~~~~d~~~l~~~l~ 192 (442)
.+.|++++++++|+..+++.... ..+.|+...-+|.+....+... .......+|. -|.+.+++.++
T Consensus 143 ~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~ 215 (454)
T 4ao9_A 143 IEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIE 215 (454)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHH
T ss_pred CCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHh
Confidence 57899999999999998876532 3467888888887643321100 1223334432 27899999987
Q ss_pred HHHhcCCceeEEEEeCCCCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEE
Q 046900 193 EAESKDMRVRGVLITNPSNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVH 271 (442)
Q Consensus 193 ~~~~~~~~~~~v~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi 271 (442)
+. +.++.+|++..-....|.+. +.+-+++|.++|++||+++|.||++.. ..+..+ ..+... ..+.
T Consensus 216 ~~---~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~--a~e~~g-----v~PD-- 281 (454)
T 4ao9_A 216 RH---GPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHG--LANKLG-----IRSD-- 281 (454)
T ss_dssp HT---GGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTC--HHHHHT-----CCCS--
T ss_pred hc---CCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCcccc--chhccC-----CCCc--
Confidence 64 23565555543355677655 566699999999999999999999873 223222 111111 0122
Q ss_pred EEecCcccCCCCCceeEEEeecCHHHHHHHHHc------cccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Q 046900 272 IVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM------SSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQM 345 (442)
Q Consensus 272 ~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (442)
+-+++|.+| .|+.+|.+++ .+++.+.+... ...+..++++.+++.+.|+...- + +..++++++-++
T Consensus 282 -i~t~gK~lg-gG~Piga~~~-~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~-~----~~~~~~~~~g~~ 353 (454)
T 4ao9_A 282 -LTTLGKYIG-GGMSFGAFGG-RADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFT-P----EAAGALAERGEA 353 (454)
T ss_dssp -EEEEEGGGG-TTSSCEEEEE-CHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSC-H----HHHHHHHHHHHH
T ss_pred -EEEeccccC-CCCcceeeee-HHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhc-c----ChhHHHHHHHHH
Confidence 237889998 8999999998 66776665321 12234567777766665542211 1 122223333333
Q ss_pred HHHHHH----hCCCeeecCCceEEEEEecCCcc-----c--ccChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEE
Q 046900 346 IIEGLR----SAGIECLKGNAGLFCWMNLSPLL-----E--EQTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVC 414 (442)
Q Consensus 346 l~~~L~----~~g~~~~~~~~g~~~~~~~~~~~-----~--~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls 414 (442)
|.+.|+ +.++......-|.++.+.+.... . ..+..-...++..|+++ ||.+.|. +++.++
T Consensus 354 l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~-Gv~~~p~--------~~~~~s 424 (454)
T 4ao9_A 354 LRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNE-DIYSSPR--------GFVVLS 424 (454)
T ss_dssp HHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHT-TEECCTT--------CEEECC
T ss_pred HHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHC-CEEEcCC--------CCEEEe
Confidence 333333 33433322233445555553211 0 01111235677788887 9998773 345556
Q ss_pred eecCCHHHHHHHHHHHHHHHHHHH
Q 046900 415 FANMSEQTLEVALKRIHNFMQKRE 438 (442)
Q Consensus 415 ~~~~~~e~i~~~l~~l~~~l~~~~ 438 (442)
... +++++++++++|.+++.++.
T Consensus 425 ~~~-T~~dId~~l~al~~~l~~~~ 447 (454)
T 4ao9_A 425 LPL-TDADIDRYVAAIGSFIGGHG 447 (454)
T ss_dssp TTC-CHHHHHHHHHHHHHHHHHSG
T ss_pred CCC-CHHHHHHHHHHHHHHHHhcc
Confidence 554 89999999999999998765
No 231
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.71 E-value=7e-15 Score=141.64 Aligned_cols=301 Identities=16% Similarity=0.177 Sum_probs=184.5
Q ss_pred CCcEEEecChHHHHHHHHHhhcCC----CCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC-CCCCcCCHHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADP----GDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS-SNNFQITPQALEAAYKEA 194 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~----gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~-~~~~~~d~~~l~~~l~~~ 194 (442)
....++++|+|.++..++.+.+++ +|.|+++.-+|.....++.+ .|++++.++... +..+.+|++.++++|+++
T Consensus 134 ~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL-~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ 212 (501)
T 3hl2_A 134 VANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMIT-AGFEPVVIENVLEGDELRTDLKAVEAKVQEL 212 (501)
T ss_dssp CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHH-TTCEEEEECEEEETTEEEECHHHHHHHHHHH
T ss_pred CCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHH-cCCeEEEEeeeecccccCCCHHHHHHHHHhc
Confidence 346999999997777666666553 49999999999999999985 999999997621 125789999999999975
Q ss_pred HhcCCceeEEEEe-CCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhh-hcCCCCCcEEE
Q 046900 195 ESKDMRVRGVLIT-NPSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEA-RQYKDSERVHI 272 (442)
Q Consensus 195 ~~~~~~~~~v~l~-~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~-~~~~~~~~vi~ 272 (442)
+.+..+++++ .|+|-.|.+-+ +++|+++|++||+++++|++|+... .....+..+ ... ..--++
T Consensus 213 ---ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~------~~~~~lp~sA~~~--GrAD~v 278 (501)
T 3hl2_A 213 ---GPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQS------SKCMHLIQQGARV--GRIDAF 278 (501)
T ss_dssp ---CGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTC------HHHHHHHHHHHHH--SCCCEE
T ss_pred ---CCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhh------hhhhhhHHHHHhc--CCCcEE
Confidence 2233344444 44564445555 9999999999999999999998522 111111111 000 012357
Q ss_pred EecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046900 273 VYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRS 352 (442)
Q Consensus 273 ~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 352 (442)
+.|.+|.+-++ +..|.+...++.+.+.+.....-...++++..+.+.++. +-.+.++++.++..+..+++.+.|++
T Consensus 279 VqS~HK~llvp-IGG~ii~~~d~e~l~~~~~~yPGr~S~Spsldl~~tLL~---lGr~Gy~~ll~e~~ela~~L~~~L~~ 354 (501)
T 3hl2_A 279 VQSLDKNFMVP-VGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLS---LGSNGYKKLLKERKEMFSYLSNQIKK 354 (501)
T ss_dssp EEEHHHHHCCC-SSCEEEEESCHHHHHHHHHTSCSCBCSHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Eecccccceee-cCceEEEeCCHHHHHHHHHhCCCCCCCcHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999997433 444555566666555543322111223344434444333 22333466666667777777777766
Q ss_pred C----CCeeec-CCceEEEEEecCCcccccChhhHHHHHHHHHHcCcE---EE-eCCC----------CCCCCC----CC
Q 046900 353 A----GIECLK-GNAGLFCWMNLSPLLEEQTREGELALWDSMLHEVKL---NI-SPGS----------SCHCSE----PG 409 (442)
Q Consensus 353 ~----g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi---~v-~pg~----------~f~~~~----~~ 409 (442)
. |-++.. +....-+.+.+...... .......+-..|..+ +| -| .+|. .|+.-. -.
T Consensus 355 la~~~ge~ll~~~~n~is~a~tl~~~~~~-~~~~~t~~gs~Lf~r-~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~ 432 (501)
T 3hl2_A 355 LSEAYNERLLHTPHNPISLAMTLKTLDEH-RDKAVTQLGSMLFTR-QVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCA 432 (501)
T ss_dssp HHHTTTCCBCCCTTCSSEEEEECTTSCTT-TSCHHHHHHHHHHHT-TCCSCEEECTTCCEEETTEEESSTTTTSSCCSSC
T ss_pred HHHhcChhhcCCCCCceeEEEeccccccc-ccccHHHHHHHHHhc-CCCcceeecCCCceEECCeeecCcccCCCCCCch
Confidence 3 545543 33334455555543111 111244555556554 43 33 4555 454321 24
Q ss_pred EEEEEee-cCCHHHHHHHHHHHHHHHHHHHhhc
Q 046900 410 WFRVCFA-NMSEQTLEVALKRIHNFMQKRERRR 441 (442)
Q Consensus 410 ~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~~~ 441 (442)
|+-++.+ .+++++++.++++|.+++.+.++++
T Consensus 433 yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~ 465 (501)
T 3hl2_A 433 YLNAASAIGMKMQDVDLFIKRLDRCLKAVRKER 465 (501)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 6777665 4589999999999999999887654
No 232
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.63 E-value=4.2e-14 Score=135.70 Aligned_cols=310 Identities=15% Similarity=0.127 Sum_probs=184.4
Q ss_pred cCCCcchHHHHHHHHHHHHHHhCCCCccCCC----cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhH-----
Q 046900 91 FQDYHGLKSFRQAMASFMEQIRGGRAKFDLN----RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL----- 161 (442)
Q Consensus 91 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~----~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----- 161 (442)
|+...-...+..-..+...+.++ ++.. ||-.-+| ++|+..++.+|++|||+|+..+..+.++...-
T Consensus 92 YgGce~vD~iE~la~~rak~lF~----a~~A~w~VNVQP~SG-s~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~ 166 (490)
T 3ou5_A 92 YGGAEVVDEIELLCQRRALEAFD----LDPAQWGVNVQPYSG-SPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDV 166 (490)
T ss_dssp ----CHHHHHHHHHHHHHHHHTT----CCTTTEEEECCCSSH-HHHHHHHHHHHCC-CCCEECBC---------------
T ss_pred cCCChHHHHHHHHHHHHHHHHhC----CCccccCCCCCcCCH-HHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCC
Confidence 43333345565555667777766 4444 5666655 56888899999999999999888776653211
Q ss_pred -hh-hcC--cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEE
Q 046900 162 -RW-RTG--IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLV 237 (442)
Q Consensus 162 -~~-~~G--~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi 237 (442)
.. ..| .+.++++++++ ...+|.|.+++...++ ++|+|+...-.+|- .++ .+++.++|.+.|.+++
T Consensus 167 ~~v~~sg~~~~~~~Y~vd~~-t~~IDyd~~~~~A~~~-----kPklIi~G~SaY~r--~id---~~~~reIAd~vGA~Lm 235 (490)
T 3ou5_A 167 KRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLF-----RPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLL 235 (490)
T ss_dssp -------------CBCEETT-TTEECHHHHHHHHHHH-----CCSEEEECCSSCCS--CCC---HHHHHHHHHHHTCEEE
T ss_pred cccccccccccccccccCCC-CCcccHHHHHHHHhhc-----CCCeEEECCccCcc--ccC---HHHHHHHHhhcccEEE
Confidence 00 012 25566666654 3579999999998876 88887765433443 233 6777777889999999
Q ss_pred EeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCH--------------HHHHHHHH
Q 046900 238 SDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYND--------------KVVTTARR 303 (442)
Q Consensus 238 ~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~--------------~~~~~~~~ 303 (442)
+|-+|......+..+++..... -++..|.+|+| .|-|.|.|++.++ .+.+.+.+
T Consensus 236 ~DmAHiaGLVA~g~~psP~~~A----------DvVTtTTHKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~ 303 (490)
T 3ou5_A 236 ADMAHISGLVAAKVIPSPFKHA----------DIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINF 303 (490)
T ss_dssp EECGGGHHHHHTTSSCCGGGTC----------SEEEEESSSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHH
T ss_pred echhhhhhhhcccccCCccccc----------eEEeccccccc--cCCCceEEEeccccccccccccchhHHHHHHHHHh
Confidence 9999864322233343433331 16789999988 7889999998542 34455554
Q ss_pred ccccCC-CcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-CCceEEEEEecCCcccccChhh
Q 046900 304 MSSFTL-ISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSAGIECLK-GNAGLFCWMNLSPLLEEQTREG 381 (442)
Q Consensus 304 ~~~~~~-~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 381 (442)
...++. .++..-.+++.+..-.+......+...++..++.+.|.+.|.+.|+++.. ...+-.+++++.....
T Consensus 304 aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~------ 377 (490)
T 3ou5_A 304 AVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGL------ 377 (490)
T ss_dssp HHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTC------
T ss_pred hcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCC------
Confidence 433322 22221111111111111122234566778888999999999999999875 2334466778754211
Q ss_pred HHHHHHHHHHcCcEEEe----CCCCCCCCCCCEEEEEee-----cCCHHHHHHHHHHHHHHHH
Q 046900 382 ELALWDSMLHEVKLNIS----PGSSCHCSEPGWFRVCFA-----NMSEQTLEVALKRIHNFMQ 435 (442)
Q Consensus 382 ~~~l~~~l~~~~gi~v~----pg~~f~~~~~~~iRls~~-----~~~~e~i~~~l~~l~~~l~ 435 (442)
....++.+|++.||.+. |+.. .+..++.|||+.. .+.++++++..+.|.+++.
T Consensus 378 tG~~ae~~Le~agItvNkN~iP~D~-sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 378 DGARAERVLELVSITANKNTCPGDR-SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp CHHHHHHHHHHTTEECEEECCTTCC-CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCcEECCCCCCCCC-CCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 12445666788899886 5542 1122456999975 3478889888888877764
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.62 E-value=2.5e-14 Score=141.53 Aligned_cols=365 Identities=14% Similarity=0.099 Sum_probs=201.2
Q ss_pred CCCCCCCCCceeeeecc--ccccc--HHHHHHHHHhCCCCcccCCCCCCCCcccccCCCcchHHHHHHHHHHHHHHhCCC
Q 046900 40 PYEESTNPSGVIQMGLA--ENQVS--FDLLEEYLEQQPEASTWGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGR 115 (442)
Q Consensus 40 ~~~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 115 (442)
.|.-+...+.+||+..+ .+.++ ++.+.+.+.++...... ....+.+. +....+++.+.+...
T Consensus 56 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~--------~~~~~~~~----~~~~~lae~L~~~~p-- 121 (456)
T 4atq_A 56 GIIRDVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTH--------TCFMVTPY----EGYVAVTEQLNRLTP-- 121 (456)
T ss_dssp TEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSC--------CTTTTSCC----HHHHHHHHHHHHHSS--
T ss_pred CEEEeCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccC--------cccCccCc----HHHHHHHHHHHHhCC--
Confidence 34445566788998765 34443 35555555433211000 00111122 233345555554321
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhc--CCCCeEEEcCCCCcChHHhHhhhcC-------------cEEEEEecCCC---
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTG-------------IKIVPIHCDSS--- 177 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~G-------------~~v~~v~~~~~--- 177 (442)
.-..+.+++++++++|++.+++... .....|+...-+|.+....+....+ -.+..+|....
T Consensus 122 -~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~ 200 (456)
T 4atq_A 122 -GDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFRE 200 (456)
T ss_dssp -CSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGC
T ss_pred -CCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceeccccccccc
Confidence 0124579999999999999886542 2346888888888775432210111 13444443211
Q ss_pred -CCCcCCHHHHHHHHHHHHh--cCCceeEEEEeCCCCCCCcC-CCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcc
Q 046900 178 -NNFQITPQALEAAYKEAES--KDMRVRGVLITNPSNPLGAT-IQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFV 253 (442)
Q Consensus 178 -~~~~~d~~~l~~~l~~~~~--~~~~~~~v~l~~P~NPtG~~-~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~ 253 (442)
....-+.+.+++.+..... .+.++.++++..-..-.|.+ .+.+-+++|.++|++||+++|.||+...+...|..+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a 280 (456)
T 4atq_A 201 ENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFA 280 (456)
T ss_dssp SSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG
T ss_pred CCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCcccccc
Confidence 1011124444444443221 12355555554335556765 4566799999999999999999999998655554322
Q ss_pred cHHHHHhhhcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHH--ccccCCCcHHHHHHHHHHhcC---chhH
Q 046900 254 SIAEILEARQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR--MSSFTLISSQTQYLLASMLSN---KKFT 328 (442)
Q Consensus 254 s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~---~~~~ 328 (442)
...+.- .+| +-+++|.+| .|+.+|.+++ .+.+.+.+.. ....+..++++.+++.+.|+. .+.
T Consensus 281 -~e~~gv-----~PD----ivt~gK~lg-gg~P~~av~~-~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l- 347 (456)
T 4atq_A 281 -VDHEGV-----VPD----IITMAKGIA-GGLPLSAITG-RADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDL- 347 (456)
T ss_dssp -GGGTTC-----CCS----EEEECGGGG-TTSSCEEEEE-EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTH-
T ss_pred -ccccCC-----CCc----hhhhhhccc-CcCCceeeEe-cHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccH-
Confidence 111110 122 236789998 8999999998 5666555432 223355678777777776652 221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCeeec--CCceEEEEEecCCcc-cccChhhHHHHHHHHHHcCcEEEeCCCCCCC
Q 046900 329 ENYIKTNRERLQKRYQMIIEGLRSAGIECLK--GNAGLFCWMNLSPLL-EEQTREGELALWDSMLHEVKLNISPGSSCHC 405 (442)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~gi~v~pg~~f~~ 405 (442)
.++.+++-+.+.++.+.+.+.+...+..+.. -.-|+++.+++.... .....+....+...++++ ||++.++..
T Consensus 348 ~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~-Gvl~~~~g~--- 423 (456)
T 4atq_A 348 NGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKE-GVIILTCGT--- 423 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHT-TEECEEECT---
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHC-CCEEEecCC---
Confidence 2223333333333333333322111112211 234567777764321 112223356788888887 999887532
Q ss_pred CCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 406 SEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 406 ~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
....|||... .++++++++++++|.++++.+
T Consensus 424 -~~~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 424 -YGNVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp -TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred -CCCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 2357999876 458999999999999998753
No 234
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.58 E-value=3.1e-12 Score=124.85 Aligned_cols=322 Identities=14% Similarity=0.134 Sum_probs=184.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCC----CCeEEEcCCCCcChHHhHhhhcCcEEEEE
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADP----GDALLVPTPYYPGFDRDLRWRTGIKIVPI 172 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~----gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v 172 (442)
...+.+.+..++.+..|.+ +....++++|+|.++.+++.+.+++ ++.|+++.-+|..+..++.. .|+.++.+
T Consensus 96 ~~~~e~~~~~~~~~~lGlp---~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l-~Gl~p~~v 171 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVH---SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVT-AGFEPVVI 171 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCT---TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHH-TTCEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCC---CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHH-cCCeeEEE
Confidence 5567778888888877621 2234688999884444444444343 89999999999999999995 99998888
Q ss_pred ecCC-CCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCC-CCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCC
Q 046900 173 HCDS-SNNFQITPQALEAAYKEAESKDMRVRGVLITNPS-NPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGSAFSSS 250 (442)
Q Consensus 173 ~~~~-~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~ 250 (442)
+... +..+.+|++.|+++|++... +.+++++.+|+ +.+|.+-+ +++|+++|++||+++++|++|+....
T Consensus 172 ~~~~~~~~~~id~~~le~aI~~~~~---~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~--- 242 (450)
T 3bc8_A 172 ENVLEGDELRTDLKAVEAKIQELGP---EHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSS--- 242 (450)
T ss_dssp CCEEETTEEECCHHHHHHHHHHHCG---GGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCH---
T ss_pred EeeecCccCCcCHHHHHHHHHhcCC---CCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhh---
Confidence 6521 23578999999999987521 23466666664 56777766 88999999999999999999985221
Q ss_pred CcccHHHHHhh-hcCCCCCcEEEEecCcccCCCCCceeEEEeecCHHHHHHHHHccccCCCcHHHHHHHHHHhcCchhHH
Q 046900 251 EFVSIAEILEA-RQYKDSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLISSQTQYLLASMLSNKKFTE 329 (442)
Q Consensus 251 ~~~s~~~~~~~-~~~~~~~~vi~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 329 (442)
....+..+ ... ..--.++.|++|.+. .....+++...++...+.+.........++++......++..+ .
T Consensus 243 ---~~~~l~~~a~~~--~~AD~~v~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G---~ 313 (450)
T 3bc8_A 243 ---KCMHLIQQGARV--GRIDAFVQSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLG---C 313 (450)
T ss_dssp ---HHHHHHHHHHHH--SCCCEEEEEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHH---H
T ss_pred ---hhHhHHHHHhcc--cCCCEEEECCccCCC-chhccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHH---H
Confidence 11111111 000 011246689999985 5556778777565555444432211122344444444433221 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH----hCCCeeecCCc-eEEEEEecCCcccccChhhHHHHHHHHHHc--CcEEEeC---
Q 046900 330 NYIKTNRERLQKRYQMIIEGLR----SAGIECLKGNA-GLFCWMNLSPLLEEQTREGELALWDSMLHE--VKLNISP--- 399 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~----~~g~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~gi~v~p--- 399 (442)
+.+.+..+...+..+++.+.|+ ++|..+...+. +.-..+.++....... .+...+.-.+... .|..+.+
T Consensus 314 ~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~-~D~tkl~i~~~~~g~sG~~v~~~~~ 392 (450)
T 3bc8_A 314 SGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHD-KAVTQLGSMLFTRQVSGARAVPLGN 392 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSS-CHHHHHHHHHHHTTCCSCEEECSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeeccccccccc-CCCceeEEEecCCCCccceeeeccc
Confidence 2233333333334444444443 34665543221 0011122322111001 1344555555333 2333331
Q ss_pred -----CC---CCCC----CCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHhhc
Q 046900 400 -----GS---SCHC----SEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRERRR 441 (442)
Q Consensus 400 -----g~---~f~~----~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~~~ 441 (442)
|. .|+. ....++-+.++ ..+++++++++++|.+++++.+++.
T Consensus 393 ~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~~ 447 (450)
T 3bc8_A 393 VQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKEQ 447 (450)
T ss_dssp EEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 11 1111 12345555443 2389999999999999988776653
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.57 E-value=6.2e-13 Score=132.08 Aligned_cols=308 Identities=14% Similarity=0.145 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhc-------CC-CCeEEEcCCCCcChHHhHhhhcC----
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILA-------DP-GDALLVPTPYYPGFDRDLRWRTG---- 166 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~-------~~-gd~Vl~~~p~y~~~~~~~~~~~G---- 166 (442)
+....+|+.+.+... .+-+.|++++++++|++.+++... .+ ...|+...-+|.+....+....|
T Consensus 111 ~~~~~lAe~L~~~~p----~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~ 186 (473)
T 4e3q_A 111 DQTVMLSEKLVEVSP----FDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYN 186 (473)
T ss_dssp HHHHHHHHHHHHHSS----CSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGG
T ss_pred HHHHHHHHHHHhhCC----CCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccc
Confidence 444556776665432 345689999999999999987642 12 25788888888764332210111
Q ss_pred -------cEEEEEecCCC---CCCcCC--------HHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCcCC-CHHHHHHHH
Q 046900 167 -------IKIVPIHCDSS---NNFQIT--------PQALEAAYKEAESKDMRVRGVLITNP-SNPLGATI-QRSVLEELL 226 (442)
Q Consensus 167 -------~~v~~v~~~~~---~~~~~d--------~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~~-~~~~l~~l~ 226 (442)
.....++.... +...-. .+++++.+.+. +.+.-+.++.-| ..-.|.+. +.+-+++|.
T Consensus 187 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr 263 (473)
T 4e3q_A 187 SVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQRE---GADTIAGFFAEPVMGAGGVIPPAKGYFQAIL 263 (473)
T ss_dssp GGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHH---CGGGEEEEEECSSBSTTTSBCCCTTHHHHHH
T ss_pred cccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhh---CCCceEEEEeCCccCCCCceeCCHHHHHHHH
Confidence 11222222110 000001 23455555432 222234455555 55567654 556799999
Q ss_pred HHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHhhhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--
Q 046900 227 DFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILEARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR-- 303 (442)
Q Consensus 227 ~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~-- 303 (442)
++|++||+++|.||+...|...+..+ ....+.- .+.+ -+++|.++ .| +.+|.+++ .+++.+.+..
T Consensus 264 ~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv------~PDi---~t~~K~l~-gG~~Pl~av~~-~~~i~~~~~~~~ 331 (473)
T 4e3q_A 264 PILRKYDIPVISDEVICGFGRTGNTW-GCVTYDF------TPDA---IISSKNLT-AGFFPMGAVIL-GPELSKRLETAI 331 (473)
T ss_dssp HHHHHTTCCEEEECTTTSSSTTSSSC-HHHHTTC------CCSE---EEECGGGG-TTSSCCEEEEE-CHHHHHHHHHHH
T ss_pred HHhcccceEEeccCccccCCcccchh-HHHhcCC------CCCh---HHhccccc-CCCCCcccccc-cHHHHHHhcccc
Confidence 99999999999999999876555432 1111111 1222 36789998 66 89999999 5677665532
Q ss_pred -------ccccCCCcHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCceEEEEEecCC
Q 046900 304 -------MSSFTLISSQTQYLLASMLSNKKFTENYIKTNRERLQKRYQMIIEGLRSA----GIECLKGNAGLFCWMNLSP 372 (442)
Q Consensus 304 -------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~ 372 (442)
....+..++++.+++.+.|+..+ + +...++.++.-+++.+.|+++ .+.-.. .-|+++-+++..
T Consensus 332 ~~~~~~~hg~T~~Gnpla~Aaala~L~~i~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vR-G~Gl~~gielv~ 405 (473)
T 4e3q_A 332 EAIEEFPHGFTASGHPVGCAIALKAIDVVM--N---EGLAENVRRLAPRFEERLKHIAERPNIGEYR-GIGFMWALEAVK 405 (473)
T ss_dssp HHHSCCCCCCTTTTCHHHHHHHHHHHHHHH--H---SSHHHHHHHHHHHHHHHHHHHTTSTTEEEEE-EETTEEEEEECS
T ss_pred ccccccccCCCCCCCcchhhhhhhhhhhhc--c---ccHHHHHHHHHHHHHHHHHHHhcCCCeeEEe-ecceEEEEEEec
Confidence 12234556777777666665211 1 112223333334444444432 222122 334566666532
Q ss_pred cccc-----cChhhHHHHHHHHHHcCcEEEeCCCCCCCCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHHHh
Q 046900 373 LLEE-----QTREGELALWDSMLHEVKLNISPGSSCHCSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKRER 439 (442)
Q Consensus 373 ~~~~-----~~~~~~~~l~~~l~~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~~~ 439 (442)
.... ........+...++++ ||++.|. ...+|++.. .++++++++++++|.+++++...
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~-------g~~i~l~PPL~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 406 DKASKTPFDGNLSVSERIANTCTDL-GLICRPL-------GQSVVLCPPFILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp BTTTTBCCCGGGCHHHHHHHHHHHT-TEECEEE-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccccccHHHHHHHHHHHHHC-CcEEEec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2110 0111256778888777 9999873 146888865 45899999999999999987643
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.51 E-value=1.6e-13 Score=145.19 Aligned_cols=231 Identities=11% Similarity=0.090 Sum_probs=137.3
Q ss_pred HHHHHHHHHHH--hcCCceeEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHhcCcEEEEeccCCcCCCCCCCcccHHHHHh
Q 046900 185 QALEAAYKEAE--SKDMRVRGVLITNP-SNPLGATI-QRSVLEELLDFATRKNIHLVSDEIYSGSAFSSSEFVSIAEILE 260 (442)
Q Consensus 185 ~~l~~~l~~~~--~~~~~~~~v~l~~P-~NPtG~~~-~~~~l~~l~~~~~~~~~~vi~De~y~~~~~~~~~~~s~~~~~~ 260 (442)
+.|++.+++.. ....++.+|++..- ++..|... +.+.+++|.++|++||+++|+||++..+...|..+ ....+.-
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv 655 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGC 655 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSS
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCC
Confidence 45666664311 11235555555432 68888755 77789999999999999999999999876666544 2222211
Q ss_pred hhcCCCCCcEEEEecCcccCCCCC-ceeEEEeecCHHHHHHHHH--------ccccCCCcHHHHHHHHHHhc---CchhH
Q 046900 261 ARQYKDSERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARR--------MSSFTLISSQTQYLLASMLS---NKKFT 328 (442)
Q Consensus 261 ~~~~~~~~~vi~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~--------~~~~~~~s~~~q~~~~~~l~---~~~~~ 328 (442)
...+ .++||.++ .| +++|++++ ++.+.+.+.. ....+..++++++++.+.|+ +.++
T Consensus 656 ------~PDi---itlsK~L~-gG~~Plgav~~-~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l- 723 (831)
T 4a0g_A 656 ------KPDI---ACFAKLLT-GGMVPLAVTLA-TDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPET- 723 (831)
T ss_dssp ------CCSE---EEECGGGG-TTSSCCEEEEE-CHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTT-
T ss_pred ------CCcE---EEEecccc-cCccCcEEEEE-CHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHH-
Confidence 1222 37999998 67 79999999 6777766543 11224567787777766664 2221
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhCC-CeeecCCceEEEEEecCCccccc--ChhhHHHHHHHHHHcCcEEEeCCCCCC
Q 046900 329 ENYIKTNRERLQKR-YQMIIEGLRSAG-IECLKGNAGLFCWMNLSPLLEEQ--TREGELALWDSMLHEVKLNISPGSSCH 404 (442)
Q Consensus 329 ~~~~~~~~~~~~~~-~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~gi~v~pg~~f~ 404 (442)
.+.+.++.+.+++. ++.+.+.+.+.. +.... ..|+++.+++....... ....+.+++..|+++ ||.+.|+
T Consensus 724 ~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~-Gv~v~p~---- 797 (831)
T 4a0g_A 724 NHNITSQGKTLRELWDEELVQQISSHSAVQRVV-VIGTLFALELKADASNSGYASLYAKSLLIMLRED-GIFTRPL---- 797 (831)
T ss_dssp CTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEE-EETTEEEEEEC---------CHHHHHHHHHHHHT-TEECCCB----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEe-ecccEEEEEEecCccccccchHHHHHHHHHHHHC-CcEEEec----
Confidence 11111111111110 122344455543 33333 34557777764321000 112356788888776 9999984
Q ss_pred CCCCCEEEEEee-cCCHHHHHHHHHHHHHHHHHH
Q 046900 405 CSEPGWFRVCFA-NMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 405 ~~~~~~iRls~~-~~~~e~i~~~l~~l~~~l~~~ 437 (442)
...+|++.. .++++++++++++|.+++++.
T Consensus 798 ---g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 798 ---GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp ---TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 257999854 348999999999999988654
No 237
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=83.12 E-value=5.3 Score=35.90 Aligned_cols=100 Identities=15% Similarity=0.187 Sum_probs=60.6
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
-++||.|++..=..+...|.+.|-.|++..-.-......++. .|.+...+..|- -|.+++++.+++..++-.+.
T Consensus 31 valVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~-~g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 31 IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE-IGGGAVGIQADS-----ANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HCTTCEEEECCT-----TCHHHHHHHHHHHHHHHSCE
T ss_pred EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-cCCCeEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 355555544433456678889998888765443334444553 677777777664 36778887777655444456
Q ss_pred eEEEEeCC-CCCCCc--CCCHHHHHHHHHH
Q 046900 202 RGVLITNP-SNPLGA--TIQRSVLEELLDF 228 (442)
Q Consensus 202 ~~v~l~~P-~NPtG~--~~~~~~l~~l~~~ 228 (442)
.. +++|. .++.+. -++.++++++.++
T Consensus 105 Di-LVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 105 DV-LFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp EE-EEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred CE-EEECCCCCCCCChhhccHHHHHHHHHH
Confidence 64 45554 333332 3577778877764
No 238
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=77.08 E-value=12 Score=32.73 Aligned_cols=102 Identities=18% Similarity=0.195 Sum_probs=57.4
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .|.++..+..|- -|.+.+++.+++..+...
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAAS-IGKKARAIAADI-----SDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-HCTTEEECCCCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hCCceEEEEcCC-----CCHHHHHHHHHHHHHHCC
Confidence 34466666654443455677888898888765443333344442 566666666654 367777777766544333
Q ss_pred ceeEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 200 RVRGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
+...++-+--..+.+. -.+.+++++..+
T Consensus 80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 80 GIDILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5564443322233332 346666766665
No 239
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=75.38 E-value=17 Score=31.75 Aligned_cols=101 Identities=17% Similarity=0.114 Sum_probs=50.0
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++..++..
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 80 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE-LGAAVRFRNADV-----TNEADATAALAFAKQEFG 80 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------CEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-hCCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 34466666654443455677888898887765444443343332 455555665543 256777777765544333
Q ss_pred ceeEEEEeCCC-CCCCc------CCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NPLGA------TIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NPtG~------~~~~~~l~~l~~ 227 (442)
+... +++|.. .+.+. ..+.+++++..+
T Consensus 81 ~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
T 3tpc_A 81 HVHG-LVNCAGTAPGEKILGRSGPHALDSFARTVA 114 (257)
T ss_dssp CCCE-EEECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCccccccccCCHHHHHHHHH
Confidence 5554 444442 22222 245566666554
No 240
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=75.07 E-value=7.8 Score=38.28 Aligned_cols=114 Identities=13% Similarity=0.144 Sum_probs=66.0
Q ss_pred CccCCCcEEEecChHHHHHHHHHhh---cCC---------C-C-----eEEEcCCCCcC-------------------hH
Q 046900 116 AKFDLNRIVVTAGATAANELLTFIL---ADP---------G-D-----ALLVPTPYYPG-------------------FD 158 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l---~~~---------g-d-----~Vl~~~p~y~~-------------------~~ 158 (442)
+.++++.|.|+.++..++...+++| +.. | . ..+.+.|.|+- +.
T Consensus 126 L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~i 205 (525)
T 3gh5_A 126 LITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQI 205 (525)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHH
T ss_pred EEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHHH
Confidence 4467778999888777766655554 222 1 1 23455666521 12
Q ss_pred HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 159 RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 159 ~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
+.+. ..++++..+.+.++.+|.+..+..-+.-.. |... .-..+.|..|+.+++++|++.|+++++-||-
T Consensus 206 d~mA-~~KlN~lH~HltDdqgwriei~~~P~Lt~~----Ga~~------~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 206 DLAS-QYKINKFHMHLSDDQGWRIEIKSWPDLIEI----GSKG------QVGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HHHH-TTTCCEEEEECBCSSCBCBCCTTSTHHHHT----TTSC------CTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHH-HcCCcEEEEEeccCCccccccccchhhhhc----cCcc------ccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 2233 266777777776666666654443332111 1110 0112346789999999999999999987653
Q ss_pred ecc
Q 046900 239 DEI 241 (442)
Q Consensus 239 De~ 241 (442)
|+
T Consensus 275 -EI 276 (525)
T 3gh5_A 275 -EI 276 (525)
T ss_dssp -EC
T ss_pred -Ee
Confidence 44
No 241
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=74.85 E-value=40 Score=29.27 Aligned_cols=100 Identities=13% Similarity=0.069 Sum_probs=57.9
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|++..=..+.+.|.+.|..|++..-.-...... +.. .|.++..+..|- -|.+.+++.+++..+
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA-AGGRIVARSLDA-----RNEDEVTAFLNAADA 80 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH-TTCEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECcC-----CCHHHHHHHHHHHHh
Confidence 34566766655444556677888898887765443333322 232 477777777664 367888888776655
Q ss_pred cCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
. .+... +++|.. .+.+. -.+.+++++..+
T Consensus 81 ~-g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 81 H-APLEV-TIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp H-SCEEE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred h-CCceE-EEECCCcCCCCCcccCCHHHHHHHHH
Confidence 5 45664 444442 22222 256666666555
No 242
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=74.50 E-value=17 Score=32.30 Aligned_cols=101 Identities=19% Similarity=0.211 Sum_probs=56.6
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++..++..
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE-IGSKAFGVRVDV-----SSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-HCTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hCCceEEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 34466666554444455677888898888765433333333332 566666666653 367777777765544333
Q ss_pred ceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
+... +++|.. .+.+. -.+.++++++.+
T Consensus 101 ~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 101 RVDV-LVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp CCCE-EEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCCE-EEECCCcCCCCCcccCCHHHHHHHHH
Confidence 5554 444442 23332 356677766655
No 243
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=73.51 E-value=29 Score=30.61 Aligned_cols=101 Identities=19% Similarity=0.206 Sum_probs=62.0
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.-++||.|++..=..+...|.+.|-.|++..-.-..... .+. ..|.++..+..|- -|.+.+++.+++..++
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~-~~g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLT-RKGYDAHGVAFDV-----TDELAIEAAFSKLDAE 83 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHH-HTTCCEEECCCCT-----TCHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-hcCCcEEEEEeeC-----CCHHHHHHHHHHHHHH
Confidence 345555555444455667888999988886543222222 233 2577888877664 3678888888877666
Q ss_pred CCceeEEEEeCCC-CCCCc--CCCHHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLGA--TIQRSVLEELLDF 228 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~~ 228 (442)
..+... +++|-. ++.+. -++.++++++.++
T Consensus 84 ~G~iDi-LVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 84 GIHVDI-LINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp TCCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCcE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 666664 555542 33332 3577778777764
No 244
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=73.26 E-value=21 Score=31.26 Aligned_cols=102 Identities=12% Similarity=0.090 Sum_probs=56.8
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++..++..
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE-IGPAAYAVQMDV-----TRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HCTTEEEEECCT-----TCHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hCCCceEEEeeC-----CCHHHHHHHHHHHHHHcC
Confidence 34567766655444455677888898887765433333333332 455556666553 367788887776655445
Q ss_pred ceeEEEEeCCCCCCC--cCCCHHHHHHHHH
Q 046900 200 RVRGVLITNPSNPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~NPtG--~~~~~~~l~~l~~ 227 (442)
++..++-+--..+.+ .-.+.+++++..+
T Consensus 82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 82 GLDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp SCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 666544432222222 2346666666555
No 245
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=72.44 E-value=38 Score=29.44 Aligned_cols=82 Identities=18% Similarity=0.073 Sum_probs=45.9
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++..+...
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 85 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK-LGNNCVFAPADV-----TSEKDVQTALALAKGKFG 85 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHH-HCTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHH-hCCceEEEEcCC-----CCHHHHHHHHHHHHHHCC
Confidence 34566666554433455677778888777654443444444442 455566666553 256777777765433323
Q ss_pred ceeEEEEe
Q 046900 200 RVRGVLIT 207 (442)
Q Consensus 200 ~~~~v~l~ 207 (442)
++.++|-+
T Consensus 86 ~id~li~~ 93 (265)
T 2o23_A 86 RVDVAVNC 93 (265)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEC
Confidence 45554433
No 246
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=71.93 E-value=25 Score=31.17 Aligned_cols=100 Identities=13% Similarity=0.061 Sum_probs=56.0
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.++.. ++..+
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~~~Dl-----~~~~~v~~~~~~~-~~~~~ 103 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE-LGNRAEFVSTNV-----TSEDSVLAAIEAA-NQLGR 103 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HCTTEEEEECCT-----TCHHHHHHHHHHH-TTSSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-hCCceEEEEcCC-----CCHHHHHHHHHHH-HHhCC
Confidence 3466666554443455677788898888765433333333342 465666666654 3678888887765 33345
Q ss_pred eeEEEEeCC-CCCCC-------cCCCHHHHHHHHH
Q 046900 201 VRGVLITNP-SNPLG-------ATIQRSVLEELLD 227 (442)
Q Consensus 201 ~~~v~l~~P-~NPtG-------~~~~~~~l~~l~~ 227 (442)
...++.++. ..+.+ ...+.+++++..+
T Consensus 104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (281)
T 3ppi_A 104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTID 138 (281)
T ss_dssp EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHH
T ss_pred CCeEEEccCcccccccccccccccCCHHHHHHHHH
Confidence 555554423 22222 2456666666554
No 247
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=70.89 E-value=18 Score=32.03 Aligned_cols=99 Identities=14% Similarity=0.165 Sum_probs=54.4
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+.+..+...++
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~~g~i 80 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA-YPDRAEAISLDV-----TDGERIDVVAADVLARYGRV 80 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH-CTTTEEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-ccCCceEEEeeC-----CCHHHHHHHHHHHHHhCCCC
Confidence 456665544333445677778898888765544444444442 455555565543 25677777776554333355
Q ss_pred eEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 202 RGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 202 ~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
..++ +|.. .+.+. -.+.+++++..+
T Consensus 81 d~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (281)
T 3m1a_A 81 DVLV-NNAGRTQVGAFEETTERELRDLFE 108 (281)
T ss_dssp SEEE-ECCCCEEECCTTTCCHHHHHHHHH
T ss_pred CEEE-ECCCcCCCCChhhCCHHHHHHHHH
Confidence 5544 4432 22222 346666666555
No 248
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=70.80 E-value=22 Score=31.10 Aligned_cols=101 Identities=12% Similarity=0.089 Sum_probs=56.2
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .|.++..+..|- -|.+.+++.+++..+...
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE-FGPRVHALRSDI-----ADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HGGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hCCcceEEEccC-----CCHHHHHHHHHHHHHHhC
Confidence 34567776655444556677888898888765443333333332 455666666654 356777777665443333
Q ss_pred ceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
+... +++|.. .+.+. -.+.+++++..+
T Consensus 82 ~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (255)
T 4eso_A 82 AIDL-LHINAGVSELEPFDQVSEASYDRQFA 111 (255)
T ss_dssp SEEE-EEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 5554 444442 22221 236666666655
No 249
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=70.41 E-value=20 Score=30.97 Aligned_cols=100 Identities=16% Similarity=0.210 Sum_probs=52.5
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++..+...+.
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELL-LGNAVIGIVADL-----AHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HGGGEEEEECCT-----TSHHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-hcCCceEEECCC-----CCHHHHHHHHHHHHHhcCCC
Confidence 466666654444445677778898887765443333333332 333455555543 25677777776554433355
Q ss_pred eEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 202 RGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 202 ~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
..++-+--..+.+. -.+.+++++..+
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~ 106 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVME 106 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHH
Confidence 65554432222222 346666766655
No 250
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=70.24 E-value=28 Score=30.56 Aligned_cols=99 Identities=12% Similarity=0.093 Sum_probs=52.9
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......+.. .++..+..++ -|.+.+++.+++..+...
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~Dv-------~~~~~v~~~~~~~~~~~g 98 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ-AGAVALYGDF-------SCETGIMAFIDLLKTQTS 98 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH-HTCEEEECCT-------TSHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh-cCCeEEECCC-------CCHHHHHHHHHHHHHhcC
Confidence 34577776655444455677778887777654433333344443 5655544433 256777777776554444
Q ss_pred ceeEEEEeCCC-C-CCCcCCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-N-PLGATIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-N-PtG~~~~~~~l~~l~~ 227 (442)
+...++ +|.. . +.....+.+++++..+
T Consensus 99 ~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 99 SLRAVV-HNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp CCSEEE-ECCCCCCCCCTTCHHHHHHHHHH
T ss_pred CCCEEE-ECCCccCCCCCCCCHHHHHHHHH
Confidence 566544 4432 1 2223344455555444
No 251
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=70.16 E-value=17 Score=32.34 Aligned_cols=100 Identities=15% Similarity=0.081 Sum_probs=54.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... .|.++..+..|- -|.+.+++.+++..++..+
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATK-IGCGAAACRVDV-----SDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-HCSSCEEEECCT-----TCHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-cCCcceEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 3466665554433455677778898887765433333333332 455555666553 2567777777655433345
Q ss_pred eeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 201 VRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 201 ~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
+..++ +|.. .+.+. -.+.++++++.+
T Consensus 104 iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 132 (277)
T 3gvc_A 104 VDKLV-ANAGVVHLASLIDTTVEDFDRVIA 132 (277)
T ss_dssp CCEEE-ECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 66544 4432 22222 346677776655
No 252
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=69.57 E-value=12 Score=36.82 Aligned_cols=108 Identities=9% Similarity=0.158 Sum_probs=60.5
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhcC----C--CC-----eEEEcCCCCc-------------C------hHHhHhhhc
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILAD----P--GD-----ALLVPTPYYP-------------G------FDRDLRWRT 165 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~~----~--gd-----~Vl~~~p~y~-------------~------~~~~~~~~~ 165 (442)
+.++++.|.|+..+..++...+++|.+ . |. ..+.+.|.|+ + +...+. ..
T Consensus 96 L~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA-~~ 174 (507)
T 2gjx_A 96 LTINDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMA-YN 174 (507)
T ss_dssp EEESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHH-HT
T ss_pred EEEeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHH-Hh
Confidence 446677899998877776666555421 1 21 2233455542 1 111222 25
Q ss_pred CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 166 GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 166 G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
++++..+.+.++.+|.+..+.+.+.-.. | . ..|.|..|+.+++++|++.|+++++-||-
T Consensus 175 KlN~lh~HltDdq~wr~ei~~~P~Lt~~----G-a---------~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 175 KLNVFHWHLVDDPSFPYESFTFPELMRK----G-S---------YNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp TCCEEEEECCCSSCCCBCCSSCTHHHHH----H-S---------SCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEecccCeeeeccccchhhhc----c-c---------cCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 5666666655544555543222221110 0 0 12446789999999999999999987764
No 253
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=69.27 E-value=24 Score=30.95 Aligned_cols=99 Identities=16% Similarity=0.183 Sum_probs=58.4
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.|+||.|++..=..+.+.|.+.|-.|++.+-.-.......+ .+.++..+..|- -|.+.+++.+++..++-.+.
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~--~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK--ERPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT--TCTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--hcCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 36676666555556678888899888876543222222222 345566666553 25777777776655444456
Q ss_pred eEEEEeCC-CCCCCc--CCCHHHHHHHHHH
Q 046900 202 RGVLITNP-SNPLGA--TIQRSVLEELLDF 228 (442)
Q Consensus 202 ~~v~l~~P-~NPtG~--~~~~~~l~~l~~~ 228 (442)
.. +++|- .++.+. -++.++++++.++
T Consensus 77 Di-LVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 77 DV-LVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp CE-EEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred CE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 64 45554 233332 3577778777764
No 254
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=69.00 E-value=20 Score=31.67 Aligned_cols=101 Identities=11% Similarity=0.085 Sum_probs=54.3
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .|.++..+..|- -|.+.+++.+++..++..
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD-LGKDVFVFSANL-----SDRKSIKQLAEVAEREME 100 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HCSSEEEEECCT-----TSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hCCceEEEEeec-----CCHHHHHHHHHHHHHHcC
Confidence 34566666554443456677888898887765433333334442 566777776654 367777777765544333
Q ss_pred ceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
+...+ ++|.. .+.+. -.+.+++++..+
T Consensus 101 ~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 101 GIDIL-VNNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp SCCEE-EECCCCC-----CCCHHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 55544 44442 22222 234455555544
No 255
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=68.95 E-value=18 Score=32.20 Aligned_cols=100 Identities=20% Similarity=0.258 Sum_probs=54.7
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCc------------C---hHHhHhhhcCcEEEEEecCCCCCCcCCHH
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYP------------G---FDRDLRWRTGIKIVPIHCDSSNNFQITPQ 185 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~------------~---~~~~~~~~~G~~v~~v~~~~~~~~~~d~~ 185 (442)
..++||.|+...=..+.+.|.+.|..|++..-... . ....+. ..|.++..+..|- -|.+
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~ 84 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE-KTGRKAYTAEVDV-----RDRA 84 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHH-HTTSCEEEEECCT-----TCHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHH-hcCCceEEEEccC-----CCHH
Confidence 34666666554444566778888988876532210 0 111122 2466777777654 3577
Q ss_pred HHHHHHHHHHhcCCceeEEEEeCC-CCCCCcCCCHHHHHHHHH
Q 046900 186 ALEAAYKEAESKDMRVRGVLITNP-SNPLGATIQRSVLEELLD 227 (442)
Q Consensus 186 ~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~~~~~~l~~l~~ 227 (442)
.+++.+++..++..+...+ ++|. ..+.+...+.+++++..+
T Consensus 85 ~v~~~~~~~~~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~ 126 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVV-VANAGICPLGAHLPVQAFADAFD 126 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEE-EECCCCCCCCTTCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEE-EECCCcCcccCcCCHHHHHHHhh
Confidence 7777776554433355544 4443 233333466677766655
No 256
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=68.74 E-value=28 Score=30.38 Aligned_cols=102 Identities=14% Similarity=0.100 Sum_probs=56.0
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++..+...
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 82 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGE-IGDAALAVAADI-----SKEADVDAAVEAALSKFG 82 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HCTTEEEEECCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-hCCceEEEEecC-----CCHHHHHHHHHHHHHhcC
Confidence 34566666655433455677778888887765443333333442 566666666654 256777777765543333
Q ss_pred ceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
++..++.+--. .+.+ ...+.+++++..+
T Consensus 83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp CCCEEEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 55554443221 2222 2246666666655
No 257
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=68.69 E-value=37 Score=29.88 Aligned_cols=101 Identities=12% Similarity=0.044 Sum_probs=56.6
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .|.++..+..|- -|.+.+++.+++..++..
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS-VGRGAVHHVVDL-----TNEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHH-HCTTCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-hCCCeEEEECCC-----CCHHHHHHHHHHHHHHcC
Confidence 33466666654443456677888898888766555555555443 455555555543 256777777765543333
Q ss_pred ceeEEEEeCCC-C-C-CC--cCCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-N-P-LG--ATIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-N-P-tG--~~~~~~~l~~l~~ 227 (442)
+... +++|.. . + .+ .-++.+++++..+
T Consensus 85 ~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 85 RLDI-VDNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp CCCE-EEECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 5554 444442 2 2 11 1346666666555
No 258
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=68.42 E-value=63 Score=28.61 Aligned_cols=102 Identities=12% Similarity=0.113 Sum_probs=56.9
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC-------h---HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPG-------F---DRDLRWRTGIKIVPIHCDSSNNFQITPQALEA 189 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~-------~---~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~ 189 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-.. . ...+.. .|.++..+..|- -|.+.+++
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv-----~~~~~v~~ 82 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE-AGGQALPIVGDI-----RDGDAVAA 82 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-HTSEEEEEECCT-----TSHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHh-cCCcEEEEECCC-----CCHHHHHH
Confidence 3456666665544445667788889888765433221 1 222332 577888877664 26777777
Q ss_pred HHHHHHhcCCceeEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 190 AYKEAESKDMRVRGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 190 ~l~~~~~~~~~~~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
.+++..++..+...+|-+--..+.+. -.+.++++++.+
T Consensus 83 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 83 AVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 77765443345564443322222222 356666766654
No 259
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=68.35 E-value=38 Score=29.17 Aligned_cols=101 Identities=8% Similarity=0.152 Sum_probs=56.7
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-..... .+. ..|.++..+..|- -|.+.+++.+++..++
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMK-EKGFKARGLVLNI-----SDIESIQNFFAEIKAE 79 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH-HTTCCEEEEECCT-----TCHHHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 346666665544345567777889888766543322222 223 2466777777654 3678888888776555
Q ss_pred CCceeEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
..++..++.+--..+.+. -.+.+++++..+
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 556665544422222222 346666666655
No 260
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=67.95 E-value=43 Score=28.93 Aligned_cols=100 Identities=20% Similarity=0.269 Sum_probs=53.0
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCC-cChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYY-PGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
..++||.|+...=..+.+.|.+.|..|++..-.- ......+.. .|.++..+..|- -|.+.+++.+++..++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 81 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRN-LGRRVLTVKCDV-----SQPGDVEAFGKQVISTFG 81 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-TTCCEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHh-cCCcEEEEEeec-----CCHHHHHHHHHHHHHHcC
Confidence 3466666555444456677778888777654322 222223332 466666666553 256777777765433323
Q ss_pred ceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
+...+ ++|.. .+.+. -.+.+++++..+
T Consensus 82 ~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 111 (249)
T 2ew8_A 82 RCDIL-VNNAGIYPLIPFDELTFEQWKKTFE 111 (249)
T ss_dssp CCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 55544 44432 22221 245666666555
No 261
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=67.73 E-value=16 Score=36.06 Aligned_cols=26 Identities=15% Similarity=0.434 Sum_probs=22.9
Q ss_pred CCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 213 LGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 213 tG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
.|..|+.+++++|++.|+++++-||-
T Consensus 224 ~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 224 PGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp CCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 36789999999999999999987764
No 262
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=64.83 E-value=41 Score=29.65 Aligned_cols=102 Identities=12% Similarity=0.151 Sum_probs=57.0
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... ..|.++..+..|- -|.+.+++.+++..++
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAFARLDEQ 100 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 34466666554443456677888898888765433222222211 2466677766654 3678888887766555
Q ss_pred CCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
..+...++ +|.. .+.+. -.+.+++++..+
T Consensus 101 ~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 101 GIDVDILV-NNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp TCCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCCEEE-ECCCCCCCCCchhCCHHHHHHHHH
Confidence 45566544 4432 22221 246666766655
No 263
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=64.18 E-value=58 Score=29.10 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=55.7
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcC-cEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTG-IKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G-~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... ..| .++..+..|- -|.+.+++.+++..+
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAARTVVD 115 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHHHHHHH
Confidence 33466665554433455677888898887765443333332221 123 4566666553 367777777765544
Q ss_pred cCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPS-NPLGA--TIQRSVLEELLDF 228 (442)
Q Consensus 197 ~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~~ 228 (442)
+..++..+ ++|.. .+.+. -++.++++++.+.
T Consensus 116 ~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 116 AFGALDVV-CANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHSCCCEE-EECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 33455644 44442 33232 3466777766653
No 264
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=64.14 E-value=28 Score=30.24 Aligned_cols=101 Identities=14% Similarity=0.164 Sum_probs=53.3
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .+.+...+..|- -|.+.+++.+++..++..
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDY-LGDNGKGMALNV-----TNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-HGGGEEEEECCT-----TCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hcccceEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 34466666554433455677888898887765332222233332 333444555543 367777777766544333
Q ss_pred ceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
+... +++|.. .+.+ .-.+.+++++..+
T Consensus 83 ~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 83 GVDI-LVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp CCSE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 5554 444442 2222 2346666666655
No 265
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=63.93 E-value=47 Score=29.28 Aligned_cols=101 Identities=21% Similarity=0.246 Sum_probs=55.3
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... ..|.++..+..|- -|.+.+++.+++..++
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDV-----RAPPAVMAAVDQALKE 102 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 3466666655444456677888898887765433222222211 1466777777654 3567777777655443
Q ss_pred CCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
..+... +++|.. .+.+. -++.+++++..+
T Consensus 103 ~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 134 (277)
T 4fc7_A 103 FGRIDI-LINCAAGNFLCPAGALSFNAFKTVMD 134 (277)
T ss_dssp HSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCE-EEECCcCCCCCCcccCCHHHHHHHHH
Confidence 335554 444442 22221 246666666655
No 266
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=62.56 E-value=12 Score=36.77 Aligned_cols=107 Identities=7% Similarity=0.066 Sum_probs=59.4
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhc---CC---CCe-----EEEcCCCCc-------------C------hHHhHhhhc
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILA---DP---GDA-----LLVPTPYYP-------------G------FDRDLRWRT 165 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~---~~---gd~-----Vl~~~p~y~-------------~------~~~~~~~~~ 165 (442)
+.++++.|.|+..+..++...+++|. .. |.. .+.+.|.|+ + +.+.+. ..
T Consensus 102 L~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma-~~ 180 (507)
T 1now_A 102 LLVKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMA-FN 180 (507)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHH-HT
T ss_pred EEEcCCeEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHH-Hh
Confidence 44677789999887777666655542 11 111 233455542 1 111122 25
Q ss_pred CcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 166 GIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 166 G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
++++..+.+.++.+|.+..+.+.+.-.. |.. .| |..|+.+++++|++.|+++++-||-
T Consensus 181 KlN~lh~HltDdq~wr~e~~~~P~Lt~~----Ga~----------~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 181 KFNVLHWHIVDDQSFPYQSITFPELSNK----GSY----------SL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp TCCEEEEECCCSSCCCBCCSSCHHHHHH----HSS----------ST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEeeccCccceeeccchhhhhcc----cCc----------CC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 5566665555444555443322221111 000 12 6789999999999999999987763
No 267
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=62.33 E-value=51 Score=28.78 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=56.3
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC---h---HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHH
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPG---F---DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYK 192 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~---~---~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~ 192 (442)
+...++||.|++..=..+.+.|.+.|..|++..-.-.. . ...+. ..|.++..+..|- -|.+.+++.++
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~d~~~v~~~~~ 83 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELE-DQGAKVALYQSDL-----SNEEEVAKLFD 83 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHH-TTTCEEEEEECCC-----CSHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHH-hcCCcEEEEECCC-----CCHHHHHHHHH
Confidence 33456666665544455667888899888774321111 1 11222 2477887777664 36778877776
Q ss_pred HHHhcCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 193 EAESKDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 193 ~~~~~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
+..++..+... +++|.. .+.+. -.+.++++++.+
T Consensus 84 ~~~~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 120 (262)
T 3ksu_A 84 FAEKEFGKVDI-AINTVGKVLKKPIVETSEAEFDAMDT 120 (262)
T ss_dssp HHHHHHCSEEE-EEECCCCCCSSCGGGCCHHHHHHHHH
T ss_pred HHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 65443335554 444442 22222 246666666555
No 268
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=61.54 E-value=49 Score=29.01 Aligned_cols=102 Identities=13% Similarity=0.180 Sum_probs=52.9
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... ..|.++..+..|- -|.+.+++.+++..+
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-----SNYEEVKKLLEAVKE 95 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 34466666554444455677778888877654332222222111 1366666666553 256777777765433
Q ss_pred cCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
+..+..++| +|.. ...+. -.+.++++++.+
T Consensus 96 ~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 128 (267)
T 1vl8_A 96 KFGKLDTVV-NAAGINRRHPAEEFPLDEFRQVIE 128 (267)
T ss_dssp HHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCcCCCCChhhCCHHHHHHHHH
Confidence 323455544 4432 22221 245566666555
No 269
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=61.51 E-value=46 Score=28.86 Aligned_cols=100 Identities=13% Similarity=0.056 Sum_probs=51.7
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... .|.++..+..|- -|.+.+++.+++..+...+
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAE-LGERSMFVRHDV-----SSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-HCTTEEEECCCT-----TCHHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-cCCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 3466665544433455677778888887764332222222232 355555665543 2567777777654333234
Q ss_pred eeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 201 VRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 201 ~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
...++ +|.. .+.+. ..+.+++++..+
T Consensus 81 id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 81 LNVLV-NNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp CCEEE-ECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 55444 4432 22222 245566665554
No 270
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=61.41 E-value=52 Score=28.91 Aligned_cols=99 Identities=17% Similarity=0.205 Sum_probs=53.6
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-...... +. ..|.++..+..|- -|.+.+++.+++..+..
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIR-DAGGTALAQVLDV-----TDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH-HTTCEEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-hcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHc
Confidence 355555544333445677778898887764332222222 22 1467777777654 25777777776554433
Q ss_pred CceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
.++.++ ++|.. .+.+. -++.+++++..+
T Consensus 80 g~iD~l-VnnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 80 GRIDVL-VNNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp SCCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 355544 44442 33222 246666666655
No 271
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=60.72 E-value=58 Score=29.12 Aligned_cols=101 Identities=16% Similarity=0.220 Sum_probs=55.0
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCC------------cCh---HHhHhhhcCcEEEEEecCCCCCCcCCH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYY------------PGF---DRDLRWRTGIKIVPIHCDSSNNFQITP 184 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y------------~~~---~~~~~~~~G~~v~~v~~~~~~~~~~d~ 184 (442)
...++||.|+...=..+.+.|.+.|..|++..-.- ... ...+. ..|.++..+..|- -|.
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~ 101 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE-ALGRRIIASQVDV-----RDF 101 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHH-hcCCceEEEECCC-----CCH
Confidence 34566666655443455677888898887643220 001 11223 2566777777664 367
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCC-CCCC---cCCCHHHHHHHHH
Q 046900 185 QALEAAYKEAESKDMRVRGVLITNPS-NPLG---ATIQRSVLEELLD 227 (442)
Q Consensus 185 ~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG---~~~~~~~l~~l~~ 227 (442)
+.+++.+++..+...++.. +++|.. .+.+ .-++.+++++..+
T Consensus 102 ~~v~~~~~~~~~~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 102 DAMQAAVDDGVTQLGRLDI-VLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp HHHHHHHHHHHHHHSCCCE-EEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCE-EEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 7777777655443335554 444442 2222 2346677776665
No 272
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=60.39 E-value=42 Score=29.70 Aligned_cols=99 Identities=20% Similarity=0.201 Sum_probs=53.6
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-...... +. ..|.++..+..|- -|.+.+++.+++..++.
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLR-AAGHDVDGSSCDV-----TSTDEVHAAVAAAVERF 99 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-TTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCcEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 466666554433455677778898887655432222222 22 1466777776654 36777777776554333
Q ss_pred CceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
.+..+ +++|.. .+.+ .-.+.++++++.+
T Consensus 100 g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 100 GPIGI-LVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp CSCCE-EEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCcE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 35554 444442 2222 2246666666555
No 273
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=60.23 E-value=59 Score=28.51 Aligned_cols=100 Identities=14% Similarity=0.229 Sum_probs=60.3
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH---HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD---RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
-++||.|++..=..+.+.|.+.|-.|++..-.-.... ..++ ..|.++..+..|- -|.+++++.+++..++-
T Consensus 9 valVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~-~~g~~~~~~~~Dv-----t~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 9 VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR-GMGKEVLGVKADV-----SKKKDVEEFVRRTFETY 82 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCCEEEEECCT-----TSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH-hcCCcEEEEEccC-----CCHHHHHHHHHHHHHHc
Confidence 4555555444334556778888988887654322222 2233 2678888888764 36788888777665444
Q ss_pred CceeEEEEeCCC--CCCCc--CCCHHHHHHHHHH
Q 046900 199 MRVRGVLITNPS--NPLGA--TIQRSVLEELLDF 228 (442)
Q Consensus 199 ~~~~~v~l~~P~--NPtG~--~~~~~~l~~l~~~ 228 (442)
.+.. ++++|-. .+.+. -++.++++++.++
T Consensus 83 G~iD-iLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 83 SRID-VLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp SCCC-EEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred CCCC-EEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 4565 4556653 33342 3677888888774
No 274
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=60.02 E-value=89 Score=27.38 Aligned_cols=100 Identities=15% Similarity=0.176 Sum_probs=56.1
Q ss_pred cEEEecChHHHH-HHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 122 RIVVTAGATAAN-ELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 122 ~i~~t~G~~~ai-~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
.+++.+|++.+| ..+...|.+.|-.|++..-.-.. ....+. ..|.++..+..|- -|.+++++.+++..++-
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALA-QRQPRATYLPVEL-----QDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHH-HHCTTCEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHH-hcCCCEEEEEeec-----CCHHHHHHHHHHHHHHh
Confidence 344444555555 45567788888777765433222 222233 2566666776654 25677777776654443
Q ss_pred CceeEEEEeCCC--CCCCcCCCHHHHHHHHHH
Q 046900 199 MRVRGVLITNPS--NPLGATIQRSVLEELLDF 228 (442)
Q Consensus 199 ~~~~~v~l~~P~--NPtG~~~~~~~l~~l~~~ 228 (442)
.+.. ++++|-. .+...-.+.++++++.++
T Consensus 82 G~iD-iLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 82 GRLD-GLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp SCCC-EEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred CCCC-EEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 4555 4555542 233445677777777663
No 275
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=59.52 E-value=91 Score=27.31 Aligned_cols=102 Identities=12% Similarity=0.106 Sum_probs=56.2
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC-------hH---HhHhhhcCcEEEEEecCCCCCCcCCHHHHH
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPG-------FD---RDLRWRTGIKIVPIHCDSSNNFQITPQALE 188 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~-------~~---~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~ 188 (442)
+...++||.|+...=..+.+.|.+.|..|++..-.-.. .. ..+. ..|.++..+..|- -|.+.++
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~~~v~ 78 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN-AAGGQGLALKCDI-----REEDQVR 78 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHH-HHTSEEEEEECCT-----TCHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHH-hcCCeEEEEeCCC-----CCHHHHH
Confidence 34456666665544445567788889888765433221 11 1223 2477887777764 3677777
Q ss_pred HHHHHHHhcCCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 189 AAYKEAESKDMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 189 ~~l~~~~~~~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
+.+++..++..+... +++|.. ...+ .-.+.+++++..+
T Consensus 79 ~~~~~~~~~~g~iD~-lvnnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 79 AAVAATVDTFGGIDI-LVNNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp HHHHHHHHHHSCCCE-EEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCE-EEECCCcccCCCcccCCHHHHHHHHh
Confidence 777665443335554 444442 2222 2356666666554
No 276
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=59.38 E-value=38 Score=29.96 Aligned_cols=98 Identities=16% Similarity=0.219 Sum_probs=52.3
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++..++..++.
T Consensus 31 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 31 AIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAE-IGDDALCVPTDV-----TDPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HTSCCEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-hCCCeEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 45554443333445677778898887765433333333332 455555565553 256777777765543333555
Q ss_pred EEEEeCCC--CCCCc--CCCHHHHHHHHH
Q 046900 203 GVLITNPS--NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 203 ~v~l~~P~--NPtG~--~~~~~~l~~l~~ 227 (442)
. +++|.. .+.+. -++.+++++..+
T Consensus 105 ~-lVnnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 105 V-LFNNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp E-EEECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred E-EEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 4 444442 22222 246666666655
No 277
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=59.28 E-value=61 Score=28.20 Aligned_cols=101 Identities=14% Similarity=0.100 Sum_probs=54.6
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-...... +. ..|.++..+..|- -|.+.+++.+.+..+.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIV-AAGGEAESHACDL-----SHSDAIAAFATGVLAA 103 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-HhCCceeEEEecC-----CCHHHHHHHHHHHHHh
Confidence 3466665544433445567778888887765433322222 22 2466777777654 2577777777665443
Q ss_pred CCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
..++..++.+.-. .+.+. ..+.+++++..+
T Consensus 104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 3456655544322 23332 246666666554
No 278
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=59.04 E-value=47 Score=28.91 Aligned_cols=101 Identities=21% Similarity=0.243 Sum_probs=55.3
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-..... .+. ..|.++..+..|- -|.+.+++.+++..+
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIR-QAGGKAIGLECNV-----TDEQHREAVIKAALD 85 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHH-HTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 3456666655444345567777888888776533222222 223 2466777777654 367777777765544
Q ss_pred cCCceeEEEEeCCC--CCCCcCCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPS--NPLGATIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~--NPtG~~~~~~~l~~l~~ 227 (442)
+..+... +++|.. .+...-.+.+++++..+
T Consensus 86 ~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 86 QFGKITV-LVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHSCCCE-EEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HcCCCCE-EEECCCCCCCCCCCCCHHHHHHHHH
Confidence 3335554 444442 22222456677766654
No 279
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=59.01 E-value=53 Score=28.30 Aligned_cols=98 Identities=17% Similarity=0.163 Sum_probs=49.4
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-........ ..|+.++. .|- -|.+.+++.+++..++..+
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~--~D~-----~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE-AVGAHPVV--MDV-----ADPASVERGFAEALAHLGR 77 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTTCEEEE--CCT-----TCHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HcCCEEEE--ecC-----CCHHHHHHHHHHHHHHcCC
Confidence 346666655443345567777888887765432222222223 24644443 332 2567777777654333335
Q ss_pred eeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 201 VRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 201 ~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
...++ +|.. .+.+ .-.+.+++++..+
T Consensus 78 id~lv-n~Ag~~~~~~~~~~~~~~~~~~~~ 106 (245)
T 1uls_A 78 LDGVV-HYAGITRDNFHWKMPLEDWELVLR 106 (245)
T ss_dssp CCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 56544 4432 2222 1245666666555
No 280
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=58.84 E-value=1.1e+02 Score=28.06 Aligned_cols=100 Identities=17% Similarity=0.207 Sum_probs=54.7
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC----------hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHH
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPG----------FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAA 190 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~----------~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~ 190 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-.. ....+. ..|.++..+..|- -|.+.+++.
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~-~~g~~~~~~~~Dv-----~d~~~v~~~ 119 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCIVDV-----RDEQQISAA 119 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HTTCEEEEEECCT-----TCHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH-hcCCeEEEEEccC-----CCHHHHHHH
Confidence 345666554443345567788889877765433221 122233 2577888777664 367888887
Q ss_pred HHHHHhcCCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 191 YKEAESKDMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 191 l~~~~~~~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
+++..++..++.. +++|.. ...+ .-.+.++++++.+
T Consensus 120 ~~~~~~~~g~iDi-lVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 120 VEKAIKKFGGIDI-LVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHSCCCE-EEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 7765444335554 444442 2222 2345566655543
No 281
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=58.60 E-value=60 Score=28.31 Aligned_cols=101 Identities=14% Similarity=0.160 Sum_probs=56.8
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-...... +. ..|.++..+..|- -|.+.+++.+++..+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVT-DTGRRALSVGTDI-----TDDAQVAHLVDETMK 84 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHH-hcCCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 34566766655444556677888898887765433222222 22 2466777777654 367888887776554
Q ss_pred cCCceeEEEEeCC-C-CCCCc--CCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNP-S-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P-~-NPtG~--~~~~~~l~~l~~ 227 (442)
+..+...++ +|. . .+.+. -.+.+++++..+
T Consensus 85 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 118 (264)
T 3ucx_A 85 AYGRVDVVI-NNAFRVPSMKPFANTTFEHMRDAIE 118 (264)
T ss_dssp HTSCCSEEE-ECCCSCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCcEEE-ECCCCCCCCCCchhCCHHHHHHHHH
Confidence 444566544 443 2 12222 346666666655
No 282
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=58.52 E-value=96 Score=27.28 Aligned_cols=101 Identities=10% Similarity=0.099 Sum_probs=52.7
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+...|.+.|..|++..-.-..... .+. ..|.++..+..|- -|.+.+++.+++..+.
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK-SFGYESSGYAGDV-----SKKEEISEVINKILTE 118 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHH-TTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH-hcCCceeEEECCC-----CCHHHHHHHHHHHHHh
Confidence 346666555443345567788889887764322111111 122 1366666666553 3678888887765443
Q ss_pred CCceeEEEEeCCCCCCC--cCCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPSNPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG--~~~~~~~l~~l~~ 227 (442)
..++..||-+.-..+.+ ...+.+++++..+
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 150 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLR 150 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 34566544432222222 1245566655554
No 283
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=58.19 E-value=50 Score=28.62 Aligned_cols=100 Identities=13% Similarity=0.074 Sum_probs=50.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... .|.++..+..|- -|.+.+++.+++..++..+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 79 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE-LGDAARYQHLDV-----TIEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-TGGGEEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hCCceeEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 3466666554443455677778888777654322222222221 344555555543 2567777777654333234
Q ss_pred eeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 201 VRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 201 ~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
...++ +|.. .+.+ .-.+.+++++..+
T Consensus 80 iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 80 VDGLV-NNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp CCEEE-ECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 55444 4432 2222 1245566655554
No 284
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=58.17 E-value=87 Score=27.17 Aligned_cols=101 Identities=17% Similarity=0.245 Sum_probs=53.9
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEc-CCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVP-TPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
...++||.|+...=..+.+.|.+.|..|++. ...-..... .+. ..|.++..+..|- -|.+.+++.+++..
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE-KLGRSALAIKADL-----TNAAEVEAAISAAA 81 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHH-TTTSCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH-hcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3456666655443345667788889888765 333222222 222 2465666666553 35777777776654
Q ss_pred hcCCceeEEEEeCCC-C-CCCc--CCCHHHHHHHHH
Q 046900 196 SKDMRVRGVLITNPS-N-PLGA--TIQRSVLEELLD 227 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~-N-PtG~--~~~~~~l~~l~~ 227 (442)
++..+...+ ++|.. . +.+. -++.+++++..+
T Consensus 82 ~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 116 (259)
T 3edm_A 82 DKFGEIHGL-VHVAGGLIARKTIAEMDEAFWHQVLD 116 (259)
T ss_dssp HHHCSEEEE-EECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHhCCCCEE-EECCCccCCCCChhhCCHHHHHHHHH
Confidence 433355544 44432 2 2222 346666666554
No 285
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=58.13 E-value=36 Score=30.21 Aligned_cols=101 Identities=19% Similarity=0.186 Sum_probs=54.2
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCC-----------Cc-----ChH---HhHhhhcCcEEEEEecCCCCCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPY-----------YP-----GFD---RDLRWRTGIKIVPIHCDSSNNF 180 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~-----------y~-----~~~---~~~~~~~G~~v~~v~~~~~~~~ 180 (442)
...++||.|++..=..+.+.|.+.|..|++..-. +. ... ..+. ..|.++..+..|-
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv---- 85 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK-GHNRRIVTAEVDV---- 85 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHH-TTTCCEEEEECCT----
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHh-hcCCceEEEEcCC----
Confidence 3456666665544455667788889888765322 10 011 1122 1466677777654
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCC-CCCCc---CCCHHHHHHHHH
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPS-NPLGA---TIQRSVLEELLD 227 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~---~~~~~~l~~l~~ 227 (442)
-|.+.+++.+++..++..+... +++|.. .+.+. -.+.+++++..+
T Consensus 86 -~~~~~v~~~~~~~~~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (286)
T 3uve_A 86 -RDYDALKAAVDSGVEQLGRLDI-IVANAGIGNGGDTLDKTSEEDWTEMID 134 (286)
T ss_dssp -TCHHHHHHHHHHHHHHHSCCCE-EEECCCCCCCCSCGGGCCHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHhCCCCE-EEECCcccCCCCccccCCHHHHHHHHH
Confidence 3577777777655443335554 444443 22222 246666666655
No 286
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=58.10 E-value=96 Score=27.32 Aligned_cols=102 Identities=9% Similarity=0.083 Sum_probs=56.0
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC-hHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPG-FDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~-~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-.. .... +....+.++..+..|- -|.+.+++.+++..
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-----TKPSEIADMMAMVA 99 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-----CCHHHHHHHHHHHH
Confidence 3456777665544455667788889888776532211 1111 1111255676776654 36788888777655
Q ss_pred hcCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 196 SKDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
++..+...+ ++|.. .+.+. -++.++++++.+
T Consensus 100 ~~~g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 133 (281)
T 3v2h_A 100 DRFGGADIL-VNNAGVQFVEKIEDFPVEQWDRIIA 133 (281)
T ss_dssp HHTSSCSEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHCCCCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 444456654 44442 22222 246666766655
No 287
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=57.88 E-value=56 Score=29.28 Aligned_cols=101 Identities=20% Similarity=0.195 Sum_probs=55.2
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+...|.+.|..|++..-.-...... +. ..|.++..+..|- -|.+.+++.+++..+
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLR-GQGFDAHGVVCDV-----RHLDEMVRLADEAFR 104 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-hcCCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34566666655443455677778888887765433322222 22 1466666776654 356777777765543
Q ss_pred cCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
...++.+ +++|.. .+.+. -.+.+++++..+
T Consensus 105 ~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 105 LLGGVDV-VFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp HHSSCSE-EEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hCCCCCE-EEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3335554 444443 22222 346666666655
No 288
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=57.76 E-value=37 Score=29.95 Aligned_cols=99 Identities=20% Similarity=0.276 Sum_probs=52.7
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCC-------Cc-----ChH---HhHhhhcCcEEEEEecCCCCCCcCCH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPY-------YP-----GFD---RDLRWRTGIKIVPIHCDSSNNFQITP 184 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~-------y~-----~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~ 184 (442)
...++||.|+...=..+.+.|.+.|..|++..-. |. ... ..+. ..|.++..+..|- -|.
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~ 86 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE-DIGSRIVARQADV-----RDR 86 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHH-HHTCCEEEEECCT-----TCH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHH-hcCCeEEEEeCCC-----CCH
Confidence 3456666665544445667788889887765322 11 011 1122 2466777777654 367
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCC-CCCCcCCCHHHHHHHHH
Q 046900 185 QALEAAYKEAESKDMRVRGVLITNPS-NPLGATIQRSVLEELLD 227 (442)
Q Consensus 185 ~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~~~~~~~l~~l~~ 227 (442)
+.+++.+++..++..++..+ ++|.. .+.+. +.+++++..+
T Consensus 87 ~~v~~~~~~~~~~~g~id~l-v~nAg~~~~~~--~~~~~~~~~~ 127 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIV-VANAGIAPMSA--GDDGWHDVID 127 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEE-EECCCCCCCSS--THHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEE-EECCCCCCCCC--CHHHHHHHHH
Confidence 77877776554433355544 44442 22222 4555665554
No 289
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=57.70 E-value=67 Score=27.65 Aligned_cols=101 Identities=16% Similarity=0.141 Sum_probs=52.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... ..|.++..+..|- -|.+.+++.+++..+..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDV-----ADRQGVDAAVASTVEAL 82 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 4567776655444455677778888777654322211111111 1355666666553 25777777776544332
Q ss_pred CceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
.+...++ +|.. .+.+. -.+.++++++.+
T Consensus 83 g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 83 GGLDILV-NNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp SCCSEEE-ECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCchhhCCHHHHHHHHH
Confidence 3555444 4432 22232 246666666555
No 290
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=57.60 E-value=36 Score=30.00 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=54.3
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCC-cC---hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYY-PG---FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y-~~---~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
...++||.|+...=..+.+.|.+.|..|++..-.- .. ....+. ..|.++..+..|- -|.+.+++.+++..
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIA-AAGGEAFAVKADV-----SQESEVEALFAAVI 101 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-hcCCcEEEEECCC-----CCHHHHHHHHHHHH
Confidence 34466666554433455677888898887643211 11 112223 2466777777654 36777777776654
Q ss_pred hcCCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 196 SKDMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
++..+... +++|.. .+.+ .-.+.+++++..+
T Consensus 102 ~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 102 ERWGRLDV-LVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HHHSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 43335554 444442 2222 1346666766655
No 291
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=57.51 E-value=63 Score=27.95 Aligned_cols=98 Identities=14% Similarity=0.186 Sum_probs=51.2
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
++||.|+...=..+.+.|.+.|..|++..-.-...... +. ..|.++..+..|- -|.+.+++.+++..++..
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 5 ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN-QAGGHAVAVKVDV-----SDRDQVFAAVEQARKTLG 78 (256)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCCEEEEECCT-----TSHHHHHHHHHHHHHHTT
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCcEEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 56665544433455677777888777654322111111 22 1355666666553 257788877776544434
Q ss_pred ceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
++..++ +|.. .+.+. -.+.+++++..+
T Consensus 79 ~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 79 GFDVIV-NNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp CCCEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 566544 4432 22222 245566665555
No 292
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=57.44 E-value=82 Score=27.73 Aligned_cols=102 Identities=15% Similarity=0.245 Sum_probs=55.6
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
+...++||.|+...=..+.+.|.+.|..|++..-.-...... +. ..|.++..+..|- -|.+.+++.+++..
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIA-GVGGKALPIRCDV-----TQPDQVRGMLDQMT 104 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHH-HTTCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 344566666655444455677888898887765433332222 22 1455666666553 25777777777654
Q ss_pred hcCCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 196 SKDMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
++..+...+| +|.. .+.+ .-.+.++++++.+
T Consensus 105 ~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 105 GELGGIDIAV-CNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp HHHSCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 4333555444 4442 2222 2346666766655
No 293
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=56.97 E-value=42 Score=29.56 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=53.6
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCC--------C-----cChH---HhHhhhcCcEEEEEecCCCCCCcCCH
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPY--------Y-----PGFD---RDLRWRTGIKIVPIHCDSSNNFQITP 184 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~--------y-----~~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~ 184 (442)
..++||.|++..=..+.+.|.+.|..|++..-. + .... ..+. ..+.++..+..|- -|.
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~ 85 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE-AANRRIVAAVVDT-----RDF 85 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHH-hcCCeEEEEECCC-----CCH
Confidence 346666655544355667788889888765321 1 0111 1122 2466677776654 367
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 185 QALEAAYKEAESKDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 185 ~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
+.+++.+++..++..+... +++|.. .+.+. -.+.+++++..+
T Consensus 86 ~~v~~~~~~~~~~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDI-IVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 7787777665433335554 444442 22222 346666666655
No 294
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=56.86 E-value=67 Score=27.64 Aligned_cols=101 Identities=15% Similarity=0.139 Sum_probs=54.8
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-...... +. ..+.++..+..|- -|.+.+++.+++..+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIV-ADGGTAISVAVDV-----SDPESAKAMADRTLA 82 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCEEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH-hcCCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34566666655444455677778888887755433222222 22 1466777777654 357777777765543
Q ss_pred cCCceeEEEEeCCCC----CCC--cCCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPSN----PLG--ATIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~N----PtG--~~~~~~~l~~l~~ 227 (442)
...++..++ +|..- +.+ ...+.+++++..+
T Consensus 83 ~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 118 (253)
T 3qiv_A 83 EFGGIDYLV-NNAAIFGGMKLDFLLTIDPEYYKKFMS 118 (253)
T ss_dssp HHSCCCEEE-ECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCcCCCCCCcccccCCHHHHHHHHh
Confidence 333555544 44321 111 1346666666554
No 295
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=56.77 E-value=34 Score=29.17 Aligned_cols=100 Identities=17% Similarity=0.196 Sum_probs=53.4
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-......... ..|.++..+..|- -|.+.+++.+++..+..
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-----SKAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-----CCHHHHHHHHHHHHHhc
Confidence 366666655433455677778888887765433222222211 2466777776654 35677777765443332
Q ss_pred CceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
.++..++ +|.. .+.+. -.+.+++++..+
T Consensus 79 g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (235)
T 3l77_A 79 GDVDVVV-ANAGLGYFKRLEELSEEEFHEMIE 109 (235)
T ss_dssp SSCSEEE-ECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCCCEEE-ECCccccccCcccCCHHHHHHHHH
Confidence 3555544 4442 33332 246666766655
No 296
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=56.69 E-value=96 Score=26.86 Aligned_cols=104 Identities=13% Similarity=0.077 Sum_probs=55.9
Q ss_pred CCCcEEEecCh--HHHHHHHHHhhcCCCCeEEEcCCCCcCh-HHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHH
Q 046900 119 DLNRIVVTAGA--TAANELLTFILADPGDALLVPTPYYPGF-DRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYK 192 (442)
Q Consensus 119 ~~~~i~~t~G~--~~ai~~~~~~l~~~gd~Vl~~~p~y~~~-~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~ 192 (442)
+...++||.|+ ...=..+.+.|.+.|..|++..-.-... ... +....|.++..+..|- -|.+.+++.++
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~ 93 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQV-----DSYESCEKLVK 93 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCC-----CCHHHHHHHHH
Confidence 34457777665 2332335567777888887764333322 121 1112466777776654 36788888777
Q ss_pred HHHhcCCceeEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 193 EAESKDMRVRGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 193 ~~~~~~~~~~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
+..+...+...++.+--..+.+. -.+.+++++..+
T Consensus 94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 130 (267)
T 3gdg_A 94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQ 130 (267)
T ss_dssp HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 66554456665444322222222 236666666655
No 297
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=56.53 E-value=34 Score=30.14 Aligned_cols=100 Identities=11% Similarity=0.179 Sum_probs=53.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCC-cC---hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYY-PG---FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y-~~---~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
..++||.|+...=..+.+.|.+.|..|++..-.- .. ....+. ..|.++..+..|- -|.+.+++.+++..+
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK-ALGSDAIAIKADI-----RQVPEIVKLFDQAVA 92 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH-hcCCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3455655544433455677888898887642211 11 122233 2566777777664 367778777766544
Q ss_pred cCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
+..++.. +++|.. .+.+. -++.+++++..+
T Consensus 93 ~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 93 HFGHLDI-AVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp HHSCCCE-EECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3335554 444442 22222 246666666655
No 298
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=55.70 E-value=75 Score=27.53 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=51.3
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC-hHHhHhh---hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPG-FDRDLRW---RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~---~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-.. ....... ..|.++..+..|- -|.+.+++.+++..++
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHHHHHHHh
Confidence 46666554443345567777888887775433222 2222111 0165666666553 2567777777654333
Q ss_pred CCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
..+...+ ++|.. .+.+ .-.+.+++++..+
T Consensus 81 ~g~iD~l-v~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 81 MGRIDIL-VNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HSCCSEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 2345544 44432 2222 1245666666554
No 299
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=55.55 E-value=84 Score=27.60 Aligned_cols=100 Identities=17% Similarity=0.191 Sum_probs=51.9
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+...|.+.|..|++..-.-..... .+.. .|.++..+..|- -|.+.+++.+++..+.
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE-AGVEADGRTCDV-----RSVPEIEALVAAVVER 96 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 346666655443345567777788777765432221111 1221 365666666553 2577787777665443
Q ss_pred CCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
-.++..+ ++|.. .+.+. -.+.+++++..+
T Consensus 97 ~g~iD~l-v~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 97 YGPVDVL-VNNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp TCSCSEE-EECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred hCCCCEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 3455644 44432 22221 245566655554
No 300
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=55.44 E-value=1e+02 Score=27.09 Aligned_cols=101 Identities=16% Similarity=0.048 Sum_probs=53.6
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
+...++||.|+...=..+.+.|.+.|..|++..-.-...... +. ..|.++..+..|-. |.+.+++.+++..
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~ 105 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRII-ASGGTAQELAGDLS-----EAGAGTDLIERAE 105 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHH-HTTCCEEEEECCTT-----STTHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH-hcCCeEEEEEecCC-----CHHHHHHHHHHHH
Confidence 344566666655444556677888898887754433333222 22 14666666666542 4456666655443
Q ss_pred hcCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 196 SKDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
+. .+...+ ++|.. .+.+. -.+.+++++..+
T Consensus 106 ~~-g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 106 AI-APVDIL-VINASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp HH-SCCCEE-EECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred Hh-CCCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 33 355544 44442 22222 346666666655
No 301
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=55.36 E-value=71 Score=27.94 Aligned_cols=83 Identities=12% Similarity=0.124 Sum_probs=45.2
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
....++||.|+...=..+...|.+.|..|++..-.-...... +.. .|.++..+..|- -|.+.+++.+++..
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-LGAKVHTFVVDC-----SNREDIYSSAKKVK 103 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh-cCCeEEEEEeeC-----CCHHHHHHHHHHHH
Confidence 334566766554433556677778888777654322222221 221 355666666553 35777877776654
Q ss_pred hcCCceeEEEEe
Q 046900 196 SKDMRVRGVLIT 207 (442)
Q Consensus 196 ~~~~~~~~v~l~ 207 (442)
+...+...||-+
T Consensus 104 ~~~g~iD~li~~ 115 (272)
T 1yb1_A 104 AEIGDVSILVNN 115 (272)
T ss_dssp HHTCCCSEEEEC
T ss_pred HHCCCCcEEEEC
Confidence 433455654443
No 302
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=55.18 E-value=62 Score=27.90 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=52.6
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcC-CCCcChH---HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPT-PYYPGFD---RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~-p~y~~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.++||.|+...=..+.+.|.+.|..|++.. ..-.... ..+. ..+.++..+..|- -|.+.+++.+++..++
T Consensus 15 ~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 15 IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK-ALGFDFYASEGNV-----GDWDSTKQAFDKVKAE 88 (256)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHH-HTTCCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCeeEEEecCC-----CCHHHHHHHHHHHHHh
Confidence 355555444333445677778887777633 3333222 2233 2465666666553 3677888877766554
Q ss_pred CCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
..+...++ +|.. .+.+ .-.+.+++++..+
T Consensus 89 ~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 89 VGEIDVLV-NNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp TCCEEEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCchhhCCHHHHHHHHH
Confidence 44566544 4442 2222 2346666666655
No 303
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=55.16 E-value=91 Score=27.67 Aligned_cols=101 Identities=16% Similarity=0.196 Sum_probs=55.4
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcCh----HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGF----DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-... ...+. ..|.++..+..|- -|.+.+++.+++..
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE-KEGVKCVLLPGDL-----SDEQHCKDIVQETV 120 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-TTTCCEEEEESCT-----TSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-hcCCcEEEEECCC-----CCHHHHHHHHHHHH
Confidence 34566666655444456677888898877654332211 12223 2566777777654 36777777776554
Q ss_pred hcCCceeEEEEeCCC--CCCCc--CCCHHHHHHHHH
Q 046900 196 SKDMRVRGVLITNPS--NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~--NPtG~--~~~~~~l~~l~~ 227 (442)
++..+...+ ++|.. .+.+. -++.++++++.+
T Consensus 121 ~~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~~ 155 (291)
T 3ijr_A 121 RQLGSLNIL-VNNVAQQYPQQGLEYITAEQLEKTFR 155 (291)
T ss_dssp HHHSSCCEE-EECCCCCCCCSSGGGCCHHHHHHHHH
T ss_pred HHcCCCCEE-EECCCCcCCCCCcccCCHHHHHHHHH
Confidence 433455544 44432 22221 236666666655
No 304
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=55.11 E-value=86 Score=26.34 Aligned_cols=60 Identities=13% Similarity=0.164 Sum_probs=40.5
Q ss_pred hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcC----cEEEEe
Q 046900 164 RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN----IHLVSD 239 (442)
Q Consensus 164 ~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~----~~vi~D 239 (442)
..|.+++.+..+ .+++++.+.+.+. ++++|.++.-..+ +.+.++++++.+++.+ +.|++=
T Consensus 114 ~~G~~v~~LG~~------vp~~~l~~~~~~~-----~~d~v~lS~~~~~-----~~~~~~~~i~~l~~~~~~~~~~v~vG 177 (210)
T 1y80_A 114 SGGFTVYNLGVD------IEPGKFVEAVKKY-----QPDIVGMSALLTT-----TMMNMKSTIDALIAAGLRDRVKVIVG 177 (210)
T ss_dssp HTTCEEEECCSS------BCHHHHHHHHHHH-----CCSEEEEECCSGG-----GTHHHHHHHHHHHHTTCGGGCEEEEE
T ss_pred HCCCEEEECCCC------CCHHHHHHHHHHc-----CCCEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence 489999877532 6789998888764 6777777653222 3456888888877654 455443
No 305
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=54.50 E-value=86 Score=27.51 Aligned_cols=101 Identities=19% Similarity=0.218 Sum_probs=54.4
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCc------------C---hHHhHhhhcCcEEEEEecCCCCCCcCCH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYP------------G---FDRDLRWRTGIKIVPIHCDSSNNFQITP 184 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~------------~---~~~~~~~~~G~~v~~v~~~~~~~~~~d~ 184 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-. . ....+. ..|.++..+..|- -|.
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~ 83 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE-KTGRRCISAKVDV-----KDR 83 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHH-hcCCeEEEEeCCC-----CCH
Confidence 344666665544334566778888988776543210 0 111122 2566777777654 357
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 185 QALEAAYKEAESKDMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 185 ~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
+.+++.+++..+...+...+ ++|.. .+.+ .-.+.+++++..+
T Consensus 84 ~~v~~~~~~~~~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 84 AALESFVAEAEDTLGGIDIA-ITNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp HHHHHHHHHHHHHHTCCCEE-EECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 77777776654433355544 44442 2222 2356666666555
No 306
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=54.49 E-value=22 Score=26.21 Aligned_cols=58 Identities=10% Similarity=0.098 Sum_probs=37.7
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHH-HHHHHHHHHHhcCcE-EEEeccCC
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRS-VLEELLDFATRKNIH-LVSDEIYS 243 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~-~l~~l~~~~~~~~~~-vi~De~y~ 243 (442)
..+.+.|.+.++++ ++..+++--|-|+.|..-+.. ..+++++..++.++. ..+||-+.
T Consensus 37 ~~~~~~l~~li~e~-----~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 37 EEDVEALLDFVRRE-----GLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHH-----TCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHHHc-----CCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 35678899988886 677899999988777654322 234444433222544 57888775
No 307
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=54.46 E-value=86 Score=27.77 Aligned_cols=102 Identities=17% Similarity=0.228 Sum_probs=52.4
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+...|.+.|..|++..-.-......... ..|.++..+..|- -|.+.+++.+++..+.
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-----RDPDMVQNTVSELIKV 101 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCHHHHHHHHHHHHHH
Confidence 3466766554433455667777888777654332222221111 1155666666553 3678888877765444
Q ss_pred CCceeEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
..++.+++-+.-....+. ..+.+++++..+
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 133 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITD 133 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 445565544322222221 245555555544
No 308
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=54.31 E-value=49 Score=29.14 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=56.1
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCCCeEEEc-CCCCcCh---HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPGDALLVP-TPYYPGF---DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~---~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
++...++||.|+...=..+.+.|.+.|..|++. ...-... ...+. ..|.++..+..|- -|.+.+++.+++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~Dv-----~d~~~v~~~~~~ 102 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE-QAGGRAVAIRADN-----RDAEAIEQAIRE 102 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCcEEEEECCC-----CCHHHHHHHHHH
Confidence 344456666665544455667788889887765 2211111 12223 2477777777664 367888877776
Q ss_pred HHhcCCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 194 AESKDMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
..++..++.. +++|.. ...+ .-.+.+++++..+
T Consensus 103 ~~~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 3v2g_A 103 TVEALGGLDI-LVNSAGIWHSAPLEETTVADFDEVMA 138 (271)
T ss_dssp HHHHHSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCcE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 5443335554 444442 2222 1246666666655
No 309
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=54.27 E-value=51 Score=28.46 Aligned_cols=97 Identities=15% Similarity=0.168 Sum_probs=49.9
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
++||.|+...=..+.+.|.+.|..|++..-.-......... . .++..+..|- -|.+.+++.+++..++..+..
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id 77 (247)
T 3dii_A 5 VIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-R-PNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT-C-TTEEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-c-ccCCeEEeeC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 66666655444455677788898887764332222222221 1 1233444442 256777777765544333555
Q ss_pred EEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 203 GVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 203 ~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
.++ +|.. .+.+. -.+.+++++..+
T Consensus 78 ~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 104 (247)
T 3dii_A 78 VLV-NNACRGSKGILSSLLYEEFDYILS 104 (247)
T ss_dssp EEE-ECCC-CCCCGGGTCCHHHHHHHHH
T ss_pred EEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 444 4432 22222 345666666655
No 310
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=54.14 E-value=15 Score=38.49 Aligned_cols=119 Identities=10% Similarity=0.128 Sum_probs=62.0
Q ss_pred cCCCcEEEecChHHHHHHHHHhh---cCCCC------eEEEcCCCCc-------------C------hHHhHhhhcCcEE
Q 046900 118 FDLNRIVVTAGATAANELLTFIL---ADPGD------ALLVPTPYYP-------------G------FDRDLRWRTGIKI 169 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l---~~~gd------~Vl~~~p~y~-------------~------~~~~~~~~~G~~v 169 (442)
++++.|.|+.....++...+++| +..++ ..+.+.|.|+ . +...+. .+++++
T Consensus 266 v~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA-~~KlN~ 344 (858)
T 1c7s_A 266 IGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMA-AYKLNK 344 (858)
T ss_dssp ECSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHH-HTTCCE
T ss_pred EeCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHH-HhCCcE
Confidence 45667888877666666555544 22222 2344556553 1 122233 256677
Q ss_pred EEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeE-EEEeCC---CC--CCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 170 VPIHCDSSNNFQITPQALEAAYKEAESKDMRVRG-VLITNP---SN--PLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 170 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~-v~l~~P---~N--PtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
..+.+.++.+|.+..+.+-+.-+.-..+...... -.+ .| ++ |.|..|+.+++++|++.|+++++-||=
T Consensus 345 lh~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~-~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 345 FHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCL-LPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp EEEECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSB-CCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEEeccCccccccccCCchhhhccccccccccccccc-cccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 7766655556666544333221100000000000 000 01 11 346789999999999999999987653
No 311
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=53.86 E-value=90 Score=27.02 Aligned_cols=102 Identities=12% Similarity=0.143 Sum_probs=51.7
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hc-CcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RT-GIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~-G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .. |.++..+..|- -|.+.+++.+++..+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV-----ATPEGVDAVVESVRS 81 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 34567776654444455677778888777654322111221111 01 65666666553 256777777765433
Q ss_pred cCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
.-.+...++ +|.. .+.+. -.+.+++++..+
T Consensus 82 ~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T 3ai3_A 82 SFGGADILV-NNAGTGSNETIMEAADEKWQFYWE 114 (263)
T ss_dssp HHSSCSEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 323455444 4432 22221 245566655544
No 312
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=53.75 E-value=93 Score=27.06 Aligned_cols=104 Identities=16% Similarity=0.142 Sum_probs=54.9
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hc-CcEEEEEecCCCCCCcCCHHHHHHHHHHH
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RT-GIKIVPIHCDSSNNFQITPQALEAAYKEA 194 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~-G~~v~~v~~~~~~~~~~d~~~l~~~l~~~ 194 (442)
+...++||.|+...=..+.+.|.+.|..|++..-.-......... .. +.++..+..|- -|.+.+++.+++.
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV-----LDALQVRAFAEAC 81 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC-----CCHHHHHHHHHHH
Confidence 344566666655444456677888898887765432222222111 02 33466666553 3567777777655
Q ss_pred HhcCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHHH
Q 046900 195 ESKDMRVRGVLITNPS-NPLGA--TIQRSVLEELLDF 228 (442)
Q Consensus 195 ~~~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~~ 228 (442)
.+...+... +++|.. .+.+. -.+.+++++..+.
T Consensus 82 ~~~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 82 ERTLGCASI-LVNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHHCSCSE-EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 433335554 444442 33232 3566767666653
No 313
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=53.44 E-value=68 Score=27.87 Aligned_cols=99 Identities=11% Similarity=0.230 Sum_probs=53.0
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEc-CCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVP-TPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.++||.|+...=..+.+.|.+.|..|++. .-.-..... .+. ..|.++..+..|- -|.+.+++.+++..++
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE-KLGVKVLVVKANV-----GQPAKIKEMFQQIDET 79 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-TTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH-hcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 35555554443344567788889887764 333222222 222 2466777777654 3677888777765443
Q ss_pred CCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
..+...++ +|.. .+.+ .-.+.+++++..+
T Consensus 80 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3oid_A 80 FGRLDVFV-NNAASGVLRPVMELEETHWDWTMN 111 (258)
T ss_dssp HSCCCEEE-ECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 34555444 4442 2222 2356666666555
No 314
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=53.32 E-value=53 Score=29.73 Aligned_cols=99 Identities=11% Similarity=0.054 Sum_probs=53.3
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCC----------CcCh---HHhHhhhcCcEEEEEecCCCCCCcCCHHHHH
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPY----------YPGF---DRDLRWRTGIKIVPIHCDSSNNFQITPQALE 188 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~----------y~~~---~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~ 188 (442)
.++||.|+...=..+.+.|.+.|..|++..-. -... ...+. ..|.++..+..|- -|.+.++
T Consensus 29 ~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~d~~~v~ 102 (322)
T 3qlj_A 29 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEIT-AAGGEAVADGSNV-----ADWDQAA 102 (322)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHH-HTTCEEEEECCCT-----TSHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHH-hcCCcEEEEECCC-----CCHHHHH
Confidence 45555554433344567778889888775422 1111 12233 2577777777654 3677777
Q ss_pred HHHHHHHhcCCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 189 AAYKEAESKDMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 189 ~~l~~~~~~~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
+.+++..++..++.. +++|.. ...+ .-.+.+++++..+
T Consensus 103 ~~~~~~~~~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 143 (322)
T 3qlj_A 103 GLIQTAVETFGGLDV-LVNNAGIVRDRMIANTSEEEFDAVIA 143 (322)
T ss_dssp HHHHHHHHHHSCCCE-EECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 777655443335554 444442 2222 1246666666655
No 315
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=53.18 E-value=78 Score=27.49 Aligned_cols=100 Identities=14% Similarity=0.078 Sum_probs=49.6
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++..++..+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 81 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE-LADAARYVHLDV-----TQPAQWKAAVDTAVTAFGG 81 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-TGGGEEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hhcCceEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 4466666554433455677778888877654322222222221 222344454443 2567777777654433234
Q ss_pred eeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 201 VRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 201 ~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
...++ +|.. ...+. -.+.+++++..+
T Consensus 82 iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 110 (260)
T 1nff_A 82 LHVLV-NNAGILNIGTIEDYALTEWQRILD 110 (260)
T ss_dssp CCEEE-ECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 55444 4432 22221 245666665554
No 316
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=52.82 E-value=50 Score=29.13 Aligned_cols=101 Identities=16% Similarity=0.147 Sum_probs=53.8
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCC--------Cc--C------hHHhHhhhcCcEEEEEecCCCCCCcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPY--------YP--G------FDRDLRWRTGIKIVPIHCDSSNNFQIT 183 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~--------y~--~------~~~~~~~~~G~~v~~v~~~~~~~~~~d 183 (442)
...++||.|+...=..+.+.|.+.|..|++..-. |. . ....+. ..|.++..+..|- -|
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~ 88 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE-DQGRKALTRVLDV-----RD 88 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH-TTTCCEEEEECCT-----TC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHH-hcCCeEEEEEcCC-----CC
Confidence 3446666655444345567788889888775321 11 0 111222 2466777776654 35
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 184 PQALEAAYKEAESKDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 184 ~~~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
.+.+++.+++..++..+...+ ++|.. .+.+. -++.+++++..+
T Consensus 89 ~~~v~~~~~~~~~~~g~id~l-vnnAg~~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVV-VANAGVLSWGRVWELTDEQWDTVIG 134 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEE-EECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHh
Confidence 777777776554433355544 44432 22222 246666666655
No 317
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=52.69 E-value=77 Score=27.47 Aligned_cols=102 Identities=12% Similarity=0.183 Sum_probs=53.9
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... ..+.++..+..|- -|.+.+++.+++..++.
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDV-----RNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHHc
Confidence 3455555544333455677788898887754332222222211 1355666666654 35677777776554433
Q ss_pred CceeEEEEeCCC-CCCC--cCCCHHHHHHHHHH
Q 046900 199 MRVRGVLITNPS-NPLG--ATIQRSVLEELLDF 228 (442)
Q Consensus 199 ~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~~ 228 (442)
.+... +++|.. .+.+ .-++.+++++..+.
T Consensus 82 g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 82 GRIDI-LINNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp SCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 35554 444442 2222 23566667666653
No 318
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=52.58 E-value=65 Score=27.99 Aligned_cols=102 Identities=14% Similarity=0.114 Sum_probs=53.4
Q ss_pred CCcEEEecCh-HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHh---hhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 120 LNRIVVTAGA-TAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRTGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 120 ~~~i~~t~G~-~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
...++||.|+ +..=..+.+.|.+.|..|++..-.-........ ...+.++..+..|- -|.+.+++.+++..
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDV-----TSTEAVDALITQTV 96 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCC-----CCHHHHHHHHHHHH
Confidence 4457777764 322234456677788888776433322222221 11234666666553 25777777776654
Q ss_pred hcCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 196 SKDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
++..+...+| +|.. .+.+. -.+.+++++..+
T Consensus 97 ~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3o38_A 97 EKAGRLDVLV-NNAGLGGQTPVVDMTDEEWDRVLN 130 (266)
T ss_dssp HHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhCCCcEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 4334556544 4442 22222 346666666655
No 319
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=52.16 E-value=58 Score=27.89 Aligned_cols=80 Identities=11% Similarity=0.080 Sum_probs=41.0
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
++||.|+...=..+...|.+.|..|++..-.-......... ..+.++..+..|- -|.+.+++.+++..+...
T Consensus 5 vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 5 AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV-----ADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 56665544433445667777887777654332222222111 1244555565543 257777777765443323
Q ss_pred ceeEEEEe
Q 046900 200 RVRGVLIT 207 (442)
Q Consensus 200 ~~~~v~l~ 207 (442)
+...++.+
T Consensus 80 ~id~li~~ 87 (250)
T 2cfc_A 80 AIDVLVNN 87 (250)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEC
Confidence 45554443
No 320
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=52.05 E-value=53 Score=29.74 Aligned_cols=100 Identities=18% Similarity=0.238 Sum_probs=53.9
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCC-------Cc-----Ch---HHhHhhhcCcEEEEEecCCCCCCcCCHH
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPY-------YP-----GF---DRDLRWRTGIKIVPIHCDSSNNFQITPQ 185 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~-------y~-----~~---~~~~~~~~G~~v~~v~~~~~~~~~~d~~ 185 (442)
..++||.|+...=..+...|.+.|..|++..-. +. .. ...+. ..|.++..+..|- -|.+
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~d~~ 120 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE-EQGRRIIARQADV-----RDLA 120 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHH-hcCCeEEEEECCC-----CCHH
Confidence 346666555444445667788889887765322 11 01 11122 2566777777654 3677
Q ss_pred HHHHHHHHHHhcCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 186 ALEAAYKEAESKDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 186 ~l~~~l~~~~~~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
.+++.+++..++..++.+ +++|.. .+.+. -++.++++++.+
T Consensus 121 ~v~~~~~~~~~~~g~iD~-lVnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDI-LVSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp HHHHHHHHHHHHHSCCCE-EEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 777777665443335554 444442 22222 346666766655
No 321
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=51.85 E-value=1.1e+02 Score=26.67 Aligned_cols=104 Identities=13% Similarity=0.136 Sum_probs=55.7
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcCh----HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGF----DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
++...++||.|+...=..+.+.|.+.|..|++..-.-... ...+. ..|.++..+..|- -|.+.+++.+++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~v~~~~~~ 100 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELE-EKGYKAAVIKFDA-----ASESDFIEAIQT 100 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCceEEEECCC-----CCHHHHHHHHHH
Confidence 3344566666655443556677778888777654322211 12223 2566677776654 356777777765
Q ss_pred HHhcCCceeEEEEeCCCCCCC--cCCCHHHHHHHHH
Q 046900 194 AESKDMRVRGVLITNPSNPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P~NPtG--~~~~~~~l~~l~~ 227 (442)
..+...++..++.+--..+.+ .-.+.+++++..+
T Consensus 101 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 101 IVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 544334566544432222222 2346666666655
No 322
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=51.76 E-value=1e+02 Score=26.50 Aligned_cols=102 Identities=16% Similarity=0.146 Sum_probs=51.5
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChH---HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFD---RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-.... ..++. .|.++..+..|- -|.+.+++.+++..+
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM-EGHDVSSVVMDV-----TNTESVQNAVRSVHE 86 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 345777765544334556777778887776543322111 11221 355566666553 257777777765433
Q ss_pred cCCceeEEEEeCCCCC-CCc--CCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPSNP-LGA--TIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NP-tG~--~~~~~~l~~l~~ 227 (442)
...++..++.+.-..+ .+. -.+.+++++..+
T Consensus 87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 120 (260)
T 3awd_A 87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVD 120 (260)
T ss_dssp HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 3235565554432221 222 235555555443
No 323
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=51.70 E-value=68 Score=28.01 Aligned_cols=102 Identities=12% Similarity=0.127 Sum_probs=51.2
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHh---hhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-........ ...|.++..+..|-. |.+.+++.+++..++
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA-----EPDAPAELARRAAEA 95 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----STTHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 345665554443345567778889888776543222222211 114666666666542 445666655544333
Q ss_pred CCceeEEEEeCCCCCCC--cCCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPSNPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG--~~~~~~~l~~l~~ 227 (442)
..+...++-+--....+ .-.+.+++++..+
T Consensus 96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 127 (266)
T 4egf_A 96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIA 127 (266)
T ss_dssp HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 33566554442222212 2246666666555
No 324
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=51.42 E-value=65 Score=28.84 Aligned_cols=97 Identities=20% Similarity=0.246 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecCh---HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGA---TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~---~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
.+=|..+.+...+.-+ ..--|+++.|+ .+++.++-.+---.-|.|++..|.|....+
T Consensus 52 ~~Er~~v~~~~~~~~~-----gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~--------------- 111 (289)
T 2yxg_A 52 HEEHKKVIEKVVDVVN-----GRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQ--------------- 111 (289)
T ss_dssp HHHHHHHHHHHHHHHT-----TSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH---------------
T ss_pred HHHHHHHHHHHHHHhC-----CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH---------------
Confidence 3445555555544322 11237777775 555555433321133888888888753211
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHH
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELL 226 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~ 226 (442)
+.+.+.++...+.. ...++++++|.. ||..++.+.+.+|+
T Consensus 112 ----------~~l~~~f~~ia~a~-~lPiilYn~P~~-tg~~l~~~~~~~La 151 (289)
T 2yxg_A 112 ----------EGLRKHFGKVAESI-NLPIVLYNVPSR-TAVNLEPKTVKLLA 151 (289)
T ss_dssp ----------HHHHHHHHHHHHHC-SSCEEEEECHHH-HSCCCCHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHhc-CCCEEEEeCccc-cCcCCCHHHHHHHH
Confidence 22222222111111 345788888875 89999988887776
No 325
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=51.42 E-value=60 Score=27.94 Aligned_cols=99 Identities=14% Similarity=0.204 Sum_probs=53.6
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCC-cCh---HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYY-PGF---DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y-~~~---~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.++||.|+...=..+.+.|.+.|..|++..-.- ... ...+. ..|.++..+..|- -|.+.+++.+++..++
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIK-AKGVDSFAIQANV-----ADADEVKAMIKEVVSQ 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 466666554443455677888898887643221 111 12233 2566777776654 3677777777665443
Q ss_pred CCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
..+...+ ++|.. .+.+ .-.+.+++++..+
T Consensus 80 ~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 3osu_A 80 FGSLDVL-VNNAGITRDNLLMRMKEQEWDDVID 111 (246)
T ss_dssp HSCCCEE-EECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 3455644 44442 2222 2346666666655
No 326
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=51.40 E-value=61 Score=28.32 Aligned_cols=100 Identities=19% Similarity=0.212 Sum_probs=49.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-........ ..+.++..+..|- -|.+.+++.+++..++..+
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 80 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA-ALEAEAIAVVADV-----SDPKAVEAVFAEALEEFGR 80 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCCSSEEEEECCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhcCceEEEEcCC-----CCHHHHHHHHHHHHHHcCC
Confidence 346666655444345567777888877765433222222223 2334455555543 2567777777654333334
Q ss_pred eeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 201 VRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 201 ~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
..+++ +|.. .+.+. -.+.++++++.+
T Consensus 81 iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 109 (263)
T 2a4k_A 81 LHGVA-HFAGVAHSALSWNLPLEAWEKVLR 109 (263)
T ss_dssp CCEEE-EGGGGTTTTC----CHHHHHHHHH
T ss_pred CcEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 55444 4332 22221 234555555444
No 327
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=51.31 E-value=66 Score=27.89 Aligned_cols=98 Identities=18% Similarity=0.166 Sum_probs=49.5
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPG--FDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
++||.|+...=..+.+.|.+.|..|++..-.-.. .... +. ..|.++..+..|- -|.+.+++.+++..++
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 5 AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIE-AADQKAVFVGLDV-----TDKANFDSAIDEAAEK 78 (258)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHH-TTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHH-hcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 5666554443345566777778777765322111 1111 22 1355666666553 2567777777654333
Q ss_pred CCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
-.+... +++|.. .+.+. -.+.+++++..+
T Consensus 79 ~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (258)
T 3a28_C 79 LGGFDV-LVNNAGIAQIKPLLEVTEEDLKQIYS 110 (258)
T ss_dssp HTCCCE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hCCCCE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 234554 444432 22222 245666665554
No 328
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=50.79 E-value=56 Score=28.87 Aligned_cols=83 Identities=17% Similarity=0.057 Sum_probs=48.1
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++..++..
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 78 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA-HGGNAVGVVGDV-----RSLQDQKRAAERCLAAFG 78 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-TBTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH-cCCcEEEEEcCC-----CCHHHHHHHHHHHHHhcC
Confidence 34566666655444456677888898888765443333333342 566666676653 256777777765543333
Q ss_pred ceeEEEEeCC
Q 046900 200 RVRGVLITNP 209 (442)
Q Consensus 200 ~~~~v~l~~P 209 (442)
+... +++|.
T Consensus 79 ~iD~-lvnnA 87 (281)
T 3zv4_A 79 KIDT-LIPNA 87 (281)
T ss_dssp CCCE-EECCC
T ss_pred CCCE-EEECC
Confidence 5554 44444
No 329
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=50.59 E-value=1.3e+02 Score=26.28 Aligned_cols=101 Identities=12% Similarity=0.114 Sum_probs=53.4
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+...|.+.|..|++..-.-...... +. ..|.++..+..|- -|.+.+++.+++..+
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR-EKGLNVEGSVCDL-----LSRTERDKLMQTVAH 94 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCceEEEECCC-----CCHHHHHHHHHHHHH
Confidence 34566666654444556677778888777654322212221 22 1355666666553 367777777765543
Q ss_pred cC-CceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 197 KD-MRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 197 ~~-~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
.- .+...+ ++|.. .+.+ .-.+.++++++.+
T Consensus 95 ~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 128 (273)
T 1ae1_A 95 VFDGKLNIL-VNNAGVVIHKEAKDFTEKDYNIIMG 128 (273)
T ss_dssp HTTSCCCEE-EECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HcCCCCcEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 32 355544 44442 2222 2246666666554
No 330
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=50.59 E-value=72 Score=28.79 Aligned_cols=108 Identities=15% Similarity=0.172 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecCh---HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGA---TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD 175 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~---~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~ 175 (442)
+=|.++.+...+.-+ ..--|+++.|+ .+++.++-.+---.-|.|++..|.|....+. |+
T Consensus 64 eEr~~v~~~~~~~~~-----grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~-----~l-------- 125 (303)
T 2wkj_A 64 SEREQVLEIVAEEAK-----GKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFE-----EH-------- 125 (303)
T ss_dssp HHHHHHHHHHHHHHT-----TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHH-----HH--------
T ss_pred HHHHHHHHHHHHHhC-----CCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHH-----HH--------
Confidence 445555555444322 12237777775 5555554333211338888888888543110 00
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcCCc-eeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 176 SSNNFQITPQALEAAYKEAESKDMR-VRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~~~-~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
.+.+++..+.. . ..++++++|. .||..++.+.+.+|++ --|+.=|=|..
T Consensus 126 --------~~~f~~va~a~-----~~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiK~s~ 175 (303)
T 2wkj_A 126 --------CDHYRAIIDSA-----DGLPMVVYNIPA-LSGVKLTLDQINTLVT---LPGVGALXQTS 175 (303)
T ss_dssp --------HHHHHHHHHHH-----TTCCEEEEECHH-HHCCCCCHHHHHHHHT---STTEEEEEECC
T ss_pred --------HHHHHHHHHhC-----CCCCEEEEeCcc-ccCCCCCHHHHHHHhc---CCCEEEEeCCC
Confidence 01122221111 3 5678888887 6899999888877764 23554444543
No 331
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=50.48 E-value=90 Score=27.13 Aligned_cols=101 Identities=14% Similarity=0.213 Sum_probs=51.4
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hc--CcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RT--GIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~--G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... .. |.++..+..|- -|.+.+++.+++..+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-----SDEAQVEAYVTATTE 88 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 3466666554433455677778888777654322212211111 01 55666666553 256777777765443
Q ss_pred cCCceeEEEEeCCC-CCC-C--cCCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPS-NPL-G--ATIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~-NPt-G--~~~~~~~l~~l~~ 227 (442)
+..+... +++|.. .+. + .-.+.+++++..+
T Consensus 89 ~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 122 (267)
T 1iy8_A 89 RFGRIDG-FFNNAGIEGKQNPTESFTAAEFDKVVS 122 (267)
T ss_dssp HHSCCSE-EEECCCCCCCCBCGGGSCHHHHHHHHH
T ss_pred HcCCCCE-EEECCCcCCCCCCcccCCHHHHHHHHH
Confidence 3234554 444442 111 2 1245566666554
No 332
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=50.46 E-value=84 Score=28.15 Aligned_cols=108 Identities=17% Similarity=0.277 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecCh---HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGA---TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~---~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
.+=|..+.+...+.-+. .--|+++.|+ .+++.++-.+---.-|.|++..|.|....+
T Consensus 52 ~~Er~~v~~~~~~~~~g-----r~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~--------------- 111 (292)
T 2vc6_A 52 KSEHEQVVEITIKTANG-----RVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQ--------------- 111 (292)
T ss_dssp HHHHHHHHHHHHHHHTT-----SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH---------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH---------------
Confidence 34455555554443221 1237777765 555555533332233889988888754211
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEe
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSD 239 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~D 239 (442)
+.+.+.++...+.. ...++++++|. .||..++.+.+.+|++- --|+.=|=|
T Consensus 112 ----------~~l~~~f~~ia~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~~--~pnIvgiK~ 162 (292)
T 2vc6_A 112 ----------EGIYQHFKAIDAAS-TIPIIVYNIPG-RSAIEIHVETLARIFED--CPNVKGVXD 162 (292)
T ss_dssp ----------HHHHHHHHHHHHHC-SSCEEEEECHH-HHSCCCCHHHHHHHHHH--CTTEEEEEE
T ss_pred ----------HHHHHHHHHHHHhC-CCCEEEEeCcc-ccCcCCCHHHHHHHHhh--CCCEEEEec
Confidence 22222221111111 34578888776 58999998887777531 125544445
No 333
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=50.14 E-value=1.1e+02 Score=25.82 Aligned_cols=103 Identities=12% Similarity=0.074 Sum_probs=51.6
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh---hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---RTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... ..+.++..+..|- -|.+.+++.+++..+
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL-----LSEESINKAFEEIYN 81 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34466665544433455667777888777654322111111110 0355666666553 367888887776544
Q ss_pred cCCceeEEEEeCCCCCCC--cCCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPSNPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG--~~~~~~~l~~l~~ 227 (442)
...++..++-+--..+.+ .-.+.+++++..+
T Consensus 82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (248)
T 2pnf_A 82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLK 114 (248)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHh
Confidence 334566555432222222 1235555555444
No 334
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=49.98 E-value=86 Score=28.12 Aligned_cols=96 Identities=18% Similarity=0.234 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecCh---HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGA---TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD 175 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~---~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~ 175 (442)
+=|..+.+...+.-+. .--|+++.|+ .+++.++-.+---.-|.|++..|.|....+
T Consensus 53 ~Er~~v~~~~~~~~~g-----rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~---------------- 111 (294)
T 2ehh_A 53 EEHEKVIEFAVKRAAG-----RIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQ---------------- 111 (294)
T ss_dssp HHHHHHHHHHHHHHTT-----SSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH----------------
T ss_pred HHHHHHHHHHHHHhCC-----CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH----------------
Confidence 4455555554443221 1237777775 555555533332233889888888853211
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHH
Q 046900 176 SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELL 226 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~ 226 (442)
+.+.+.++...+.. +..++++++|.. ||..++.+.+.+|+
T Consensus 112 ---------~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~La 151 (294)
T 2ehh_A 112 ---------RGLYEHFKTVAQEV-DIPIIIYNIPSR-TCVEISVDTMFKLA 151 (294)
T ss_dssp ---------HHHHHHHHHHHHHC-CSCEEEEECHHH-HSCCCCHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHhc-CCCEEEEeCCcc-cCcCCCHHHHHHHH
Confidence 12222221111111 345788888864 89999988887776
No 335
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=49.77 E-value=81 Score=27.34 Aligned_cols=101 Identities=12% Similarity=0.080 Sum_probs=49.4
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-........ ....++..+..|- -|.+.+++.+++..++..
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~-----~d~~~v~~~~~~~~~~~g 85 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVA-GLENGGFAVEVDV-----TKRASVDAAMQKAIDALG 85 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCTTCCEEEECCT-----TCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCeEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 3456676665444445567777888887765432222222222 1221333444432 256777777765433323
Q ss_pred ceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
++..+ ++|.. .+.+ .-.+.+++++..+
T Consensus 86 ~iD~l-v~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 86 GFDLL-CANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp CCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEE-EECCCcCCCCChhhCCHHHHHHHHH
Confidence 45544 44432 2222 2245566665554
No 336
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=49.08 E-value=74 Score=27.67 Aligned_cols=93 Identities=17% Similarity=0.250 Sum_probs=54.1
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.++||.|++..=..+.+.|.+.|-.|++..-.-.... . ..+.++..+..|- -|.+.+++.++++ .+.
T Consensus 13 ~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~---~-~~~~~~~~~~~Dv-----~~~~~v~~~~~~~----g~i 79 (242)
T 4b79_A 13 QVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH---A-PRHPRIRREELDI-----TDSQRLQRLFEAL----PRL 79 (242)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT---S-CCCTTEEEEECCT-----TCHHHHHHHHHHC----SCC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh---h-hhcCCeEEEEecC-----CCHHHHHHHHHhc----CCC
Confidence 3555555544445566788889988887654322221 1 2444566666553 2578888888764 345
Q ss_pred eEEEEeCCC-CCCCcCCCHHHHHHHHHH
Q 046900 202 RGVLITNPS-NPLGATIQRSVLEELLDF 228 (442)
Q Consensus 202 ~~v~l~~P~-NPtG~~~~~~~l~~l~~~ 228 (442)
. ++++|-. +....-++.++++++.++
T Consensus 80 D-iLVNNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 80 D-VLVNNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp S-EEEECCCCCCGGGGGSHHHHHHHHHH
T ss_pred C-EEEECCCCCCCcccCCHHHHHHHHHH
Confidence 5 4555542 333345677777777664
No 337
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=48.56 E-value=1e+02 Score=26.32 Aligned_cols=101 Identities=18% Similarity=0.148 Sum_probs=50.2
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEE-EEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKI-VPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v-~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++ ..+..|- -|.+.+++.+++..+ .
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~-~ 83 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQE-LGAAVAARIVADV-----TDAEAMTAAAAEAEA-V 83 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HGGGEEEEEECCT-----TCHHHHHHHHHHHHH-H
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hcccceeEEEEec-----CCHHHHHHHHHHHHh-h
Confidence 34567766544433456677777887777654332222222221 34444 4454443 257778777765433 2
Q ss_pred CceeEEEEeCCCCCCC--cCCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPSNPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG--~~~~~~~l~~l~~ 227 (442)
.+...++-+....+.+ .-.+.+++++..+
T Consensus 84 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (254)
T 2wsb_A 84 APVSILVNSAGIARLHDALETDDATWRQVMA 114 (254)
T ss_dssp SCCCEEEECCCCCCCBCSTTCCHHHHHHHHH
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 3455544432222222 2245555555544
No 338
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=48.56 E-value=1e+02 Score=27.15 Aligned_cols=102 Identities=12% Similarity=0.077 Sum_probs=55.8
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... ..|.++..+..|- -|.+.+++.+++..++
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADV-----SDELQMRNAVRDLVLK 102 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 34466666655444455677888898887765433222222221 1456677776654 3677777777765443
Q ss_pred CCceeEEEEeCCC-C-CCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-N-PLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-N-PtG~--~~~~~~l~~l~~ 227 (442)
..++..+ ++|.. . +.+. -++.+++++..+
T Consensus 103 ~g~iD~l-VnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (283)
T 3v8b_A 103 FGHLDIV-VANAGINGVWAPIDDLKPFEWDETIA 135 (283)
T ss_dssp HSCCCEE-EECCCCCCCBCCTTTSCHHHHHHHHH
T ss_pred hCCCCEE-EECCCCCCCCCchhhCCHHHHHHHHH
Confidence 3456644 44442 1 2122 356666666655
No 339
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=48.29 E-value=98 Score=26.48 Aligned_cols=99 Identities=11% Similarity=0.186 Sum_probs=50.8
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCC-CCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTP-YYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p-~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.++||.|+...=..+.+.|.+.|..|++..- .-..... .+. ..|.++..+..|- -|.+.+++.+++..+.
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 6 VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIK-KLGSDAIAVRADV-----ANAEDVTNMVKQTVDV 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 4666655444334456777788887776432 2111111 122 1355666666553 2577777777654433
Q ss_pred CCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
..+...++ +|.. .+.+. -.+.+++++..+
T Consensus 80 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 2uvd_A 80 FGQVDILV-NNAGVTKDNLLMRMKEEEWDTVIN 111 (246)
T ss_dssp HSCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 23455544 4432 22221 245666666555
No 340
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=48.26 E-value=1.3e+02 Score=25.76 Aligned_cols=100 Identities=15% Similarity=0.192 Sum_probs=50.8
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHh---hhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-........ ...+.++..+..|- -|.+.+++.+++.....
T Consensus 16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV-----SNTDIVTKTIQQIDADL 90 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCT-----TCHHHHHHHHHHHHHHS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeC-----CCHHHHHHHHHHHHHhc
Confidence 46666554443345567777788777665432222222111 11355666666553 35778888777654433
Q ss_pred CceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
.+...++ ++.. ...+ ...+.+++++..+
T Consensus 91 ~~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 1h5q_A 91 GPISGLI-ANAGVSVVKPATELTHEDFAFVYD 121 (265)
T ss_dssp CSEEEEE-ECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCcCCCCchhhCCHHHHHHHHh
Confidence 4555444 4432 2222 1245555655544
No 341
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=48.05 E-value=1.3e+02 Score=25.77 Aligned_cols=99 Identities=17% Similarity=0.184 Sum_probs=51.1
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCc-ChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYP-GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-. .....+. ..|.++..+..|- -|.+.+++.+++..++..+
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 79 (255)
T 2q2v_A 6 TALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIA-RHGVKAVHHPADL-----SDVAQIEALFALAEREFGG 79 (255)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTSCCEEEECCCT-----TSHHHHHHHHHHHHHHHSS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH-hcCCceEEEeCCC-----CCHHHHHHHHHHHHHHcCC
Confidence 4666665444434556777788887776533222 1112222 1365666666553 2577777777654433234
Q ss_pred eeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 201 VRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 201 ~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
...++ +|.. .+.+ .-.+.+++++..+
T Consensus 80 id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (255)
T 2q2v_A 80 VDILV-NNAGIQHVAPVEQFPLESWDKIIA 108 (255)
T ss_dssp CSEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 55444 4432 2222 1245666665554
No 342
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=47.94 E-value=76 Score=28.61 Aligned_cols=107 Identities=17% Similarity=0.221 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecCh---HHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGA---TAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~---~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
+=|..+.+...+.-+. .--|+++.|+ .+++.++-.+- +-| |.|++..|.|....
T Consensus 65 eEr~~v~~~~~~~~~g-----rvpViaGvg~~~t~~ai~la~~A~-~~Gadavlv~~P~y~~~s---------------- 122 (301)
T 1xky_A 65 EEKVALYRHVVSVVDK-----RVPVIAGTGSNNTHASIDLTKKAT-EVGVDAVMLVAPYYNKPS---------------- 122 (301)
T ss_dssp HHHHHHHHHHHHHHTT-----SSCEEEECCCSCHHHHHHHHHHHH-HTTCSEEEEECCCSSCCC----------------
T ss_pred HHHHHHHHHHHHHhCC-----CceEEeCCCCCCHHHHHHHHHHHH-hcCCCEEEEcCCCCCCCC----------------
Confidence 4455555554443221 1237777765 55555553332 334 88888888875321
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
.+.+.+.++...+.. ...++++++|. .||..++.+.+.+|++ --|+.=|=|..
T Consensus 123 ---------~~~l~~~f~~va~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiKdss 175 (301)
T 1xky_A 123 ---------QEGMYQHFKAIAEST-PLPVMLYNVPG-RSIVQISVDTVVRLSE---IENIVAIKDAG 175 (301)
T ss_dssp ---------HHHHHHHHHHHHHTC-SSCEEEEECHH-HHSSCCCHHHHHHHHT---STTEEEEEECS
T ss_pred ---------HHHHHHHHHHHHHhc-CCCEEEEeCcc-ccCCCCCHHHHHHHHc---CCCEEEEEcCC
Confidence 122222222221111 34578888887 5899999888877764 23555455543
No 343
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=47.90 E-value=69 Score=27.69 Aligned_cols=101 Identities=11% Similarity=0.093 Sum_probs=51.0
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hc--C-cEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RT--G-IKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~--G-~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... .. + .++..++.|- -|.+.+++.+++..
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI-----TDCTKADTEIKDIH 82 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccC-----CCHHHHHHHHHHHH
Confidence 3466665544433455677778888887765433222222211 01 2 4555555553 25677777776654
Q ss_pred hcCCceeEEEEeCCC-CCCC-cCCCHHHHHHHHH
Q 046900 196 SKDMRVRGVLITNPS-NPLG-ATIQRSVLEELLD 227 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~-NPtG-~~~~~~~l~~l~~ 227 (442)
++..+... +++|.. ...+ ...+.+++++..+
T Consensus 83 ~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~ 115 (250)
T 3nyw_A 83 QKYGAVDI-LVNAAAMFMDGSLSEPVDNFRKIME 115 (250)
T ss_dssp HHHCCEEE-EEECCCCCCCCCCSCHHHHHHHHHH
T ss_pred HhcCCCCE-EEECCCcCCCCCCCCCHHHHHHHHH
Confidence 43345664 444442 2222 2334455555544
No 344
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=47.77 E-value=85 Score=28.13 Aligned_cols=107 Identities=17% Similarity=0.168 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecCh---HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGA---TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD 175 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~---~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~ 175 (442)
+=|..+.+...+.-+ ..--|+++.|+ .+++.++-.+---.-|.|++..|.|....+. |+
T Consensus 57 ~Er~~v~~~~~~~~~-----grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~-----~l-------- 118 (293)
T 1f6k_A 57 EEKKEIFRIAKDEAK-----DQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFP-----EI-------- 118 (293)
T ss_dssp HHHHHHHHHHHHHHT-----TSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHH-----HH--------
T ss_pred HHHHHHHHHHHHHhC-----CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHH-----HH--------
Confidence 445555555444322 12237777775 5555554333211338898888888543210 00
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 176 SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
.+.+++..+.. ...++++++|. .||..++.+.+.+|++ --|+.=|=|.
T Consensus 119 --------~~~f~~va~a~-----~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiK~s 166 (293)
T 1f6k_A 119 --------KHYYDTIIAET-----GSNMIVYSIPF-LTGVNMGIEQFGELYK---NPKVLGVKFT 166 (293)
T ss_dssp --------HHHHHHHHHHH-----CCCEEEEECHH-HHCCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred --------HHHHHHHHHhC-----CCCEEEEECcc-ccCcCCCHHHHHHHhc---CCCEEEEEEC
Confidence 01122221111 34578888776 4899999888877764 2355445454
No 345
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=47.61 E-value=44 Score=29.74 Aligned_cols=68 Identities=10% Similarity=0.025 Sum_probs=41.5
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dl-----~d~~~v~~~~~~ 83 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAART-MAGQVEVRELDL-----QDLSSVRRFADG 83 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT-SSSEEEEEECCT-----TCHHHHHHHHHT
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-hcCCeeEEEcCC-----CCHHHHHHHHHh
Confidence 34566766654444455677788898888765433333333442 566777777654 367888887764
No 346
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=47.43 E-value=68 Score=28.89 Aligned_cols=107 Identities=16% Similarity=0.185 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecCh---HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGA---TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD 175 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~---~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~ 175 (442)
+=|..+.+...+.-+. .--|+++.|+ .+++.++-.+---.-|.|++..|.|....+
T Consensus 53 ~Er~~v~~~~~~~~~g-----rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~---------------- 111 (297)
T 2rfg_A 53 EEHKRVVALVAEQAQG-----RVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQ---------------- 111 (297)
T ss_dssp HHHHHHHHHHHHHHTT-----SSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCH----------------
T ss_pred HHHHHHHHHHHHHhCC-----CCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCH----------------
Confidence 4455555554433221 1237777765 555555533322133889999998854211
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 176 SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
+.+.+.++...+.. +..++++++|.. ||..++.+.+.+|++ --|+.=|=|.
T Consensus 112 ---------~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKds 162 (297)
T 2rfg_A 112 ---------EGLYQHFKMVHDAI-DIPIIVYNIPPR-AVVDIKPETMARLAA---LPRIVGVKDA 162 (297)
T ss_dssp ---------HHHHHHHHHHHHHC-SSCEEEEECHHH-HSCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred ---------HHHHHHHHHHHHhc-CCCEEEEeCccc-cCCCCCHHHHHHHHc---CCCEEEEEeC
Confidence 12222221111111 346788888874 899999888877764 2355444443
No 347
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=47.36 E-value=97 Score=28.10 Aligned_cols=99 Identities=18% Similarity=0.227 Sum_probs=52.5
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCC--CcC------hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPY--YPG------FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~--y~~------~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
.++||.|+...=..+.+.|.+.|..|+...-. -.. ....+. ..|.++..+.+|- -|.+.+++.+++
T Consensus 7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~-~~~~~~~~~~~Dv-----td~~~v~~~~~~ 80 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFAR-DNDVDLRTLELDV-----QSQVSVDRAIDQ 80 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHH-HHTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHH-hcCCcEEEEEeec-----CCHHHHHHHHHH
Confidence 46666555444445567788899888764221 111 111122 2466666676654 357777777765
Q ss_pred HHhcCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 194 AESKDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
..++..++.. +++|.. .+.|. -++.++++++.+
T Consensus 81 ~~~~~g~iD~-lVnnAG~~~~~~~~~~~~~~~~~~~~ 116 (324)
T 3u9l_A 81 IIGEDGRIDV-LIHNAGHMVFGPAEAFTPEQFAELYD 116 (324)
T ss_dssp HHHHHSCCSE-EEECCCCCBCSCGGGSCHHHHHHHHH
T ss_pred HHHHcCCCCE-EEECCCcCCCCChhhCCHHHHHHHHH
Confidence 5433335554 444443 22222 246666665554
No 348
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=47.26 E-value=58 Score=29.90 Aligned_cols=90 Identities=19% Similarity=0.201 Sum_probs=49.6
Q ss_pred cEEEecCh---HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 122 RIVVTAGA---TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 122 ~i~~t~G~---~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
-|+++.|+ .+++.++-.+---.-|.|++..|.|....+ +.+.+.++...+..
T Consensus 105 pViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~-------------------------~~l~~~f~~VA~a~ 159 (332)
T 2r8w_A 105 TLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQ-------------------------EEAYHHFAAVAGAT 159 (332)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCH-------------------------HHHHHHHHHHHHHC
T ss_pred cEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH-------------------------HHHHHHHHHHHHhc
Confidence 37666664 555555433321133888888888754211 22222222111111
Q ss_pred CceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 199 MRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
...++++++|.. ||..++.+.+.+|++ --|+.=|=|..
T Consensus 160 -~lPiilYn~P~~-tg~~l~~e~~~~La~---~pnIvgiKdss 197 (332)
T 2r8w_A 160 -ALPLAIYNNPTT-TRFTFSDELLVRLAY---IPNIRAIKMPL 197 (332)
T ss_dssp -SSCEEEECCHHH-HCCCCCHHHHHHHHT---STTEEEEEECC
T ss_pred -CCCEEEEeCccc-cCcCCCHHHHHHHHc---CCCEEEEEeCC
Confidence 345778887765 899999888887764 23554455543
No 349
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=46.95 E-value=1.1e+02 Score=27.13 Aligned_cols=101 Identities=15% Similarity=0.154 Sum_probs=52.0
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-...... +.. .|.++..+..|- -|.+.+++.+++..+
T Consensus 34 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 107 (291)
T 3cxt_A 34 GKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKA-AGINAHGYVCDV-----TDEDGIQAMVAQIES 107 (291)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-TTCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 34566666554443556677778888777654321111111 221 354555555543 257778877776544
Q ss_pred cCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
.-.++.++ ++|.. .+.+. -.+.+++++..+
T Consensus 108 ~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~ 140 (291)
T 3cxt_A 108 EVGIIDIL-VNNAGIIRRVPMIEMTAAQFRQVID 140 (291)
T ss_dssp HTCCCCEE-EECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HcCCCcEE-EECCCcCCCCCcccCCHHHHHHHHH
Confidence 33455644 44432 22221 245566665554
No 350
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=46.80 E-value=1.4e+02 Score=25.69 Aligned_cols=101 Identities=12% Similarity=0.085 Sum_probs=53.5
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+...|.+.|..|++..-.-...... +. ..|.++..+..|- -|.+.+++.+++..+
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR-SKGFKVEASVCDL-----SSRSERQELMNTVAN 82 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 34577776655444556677778888777654321111111 22 1366776666653 267778877765544
Q ss_pred cC-CceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 197 KD-MRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 197 ~~-~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
+- .++..+ ++|.. .+.+ .-++.+++++..+
T Consensus 83 ~~~g~id~l-v~~Ag~~~~~~~~~~~~~~~~~~~~ 116 (260)
T 2ae2_A 83 HFHGKLNIL-VNNAGIVIYKEAKDYTVEDYSLIMS 116 (260)
T ss_dssp HTTTCCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCCEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 32 355544 44432 2222 1245566665554
No 351
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=46.77 E-value=1.4e+02 Score=25.49 Aligned_cols=102 Identities=14% Similarity=0.126 Sum_probs=50.8
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-..... .+.. .+.++..+..|- -|.+.+++.+++..+
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDI-----TSEQELSALADFAIS 84 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH-hCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3456666554433345567777888877765432211111 1221 355566665543 257778777765433
Q ss_pred cCCceeEEEEeCCCCCCC-cCCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPSNPLG-ATIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG-~~~~~~~l~~l~~ 227 (442)
...++..|+.+--..+.+ .-.+.+++++..+
T Consensus 85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~ 116 (255)
T 1fmc_A 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYE 116 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 323556555442222111 1345555555444
No 352
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=46.54 E-value=40 Score=26.96 Aligned_cols=59 Identities=17% Similarity=0.185 Sum_probs=39.5
Q ss_pred CcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHH-HHHHHHH-HHHhcCcE-EEEeccCC
Q 046900 180 FQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRS-VLEELLD-FATRKNIH-LVSDEIYS 243 (442)
Q Consensus 180 ~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~-~l~~l~~-~~~~~~~~-vi~De~y~ 243 (442)
..-+.+.|.+.++++ ++..+++-.|-|.-|..-... ..+.+++ ++.+.++. +++||.|.
T Consensus 40 ~~~~~~~l~~li~~~-----~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 40 GDYGLSRLSELIKDY-----TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp TBCCHHHHHHHHTTS-----EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred hHHHHHHHHHHHHHc-----CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 345789999998875 788999999977666653222 2345553 34445654 56799987
No 353
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=46.03 E-value=1.2e+02 Score=26.19 Aligned_cols=100 Identities=13% Similarity=0.201 Sum_probs=51.7
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-...... +. ..|.++..+..|- -|.+.+++.+.+..+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVR-EKGVEARSYVCDV-----TSEEAVIGTVDSVVRD 81 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-TTTSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCcEEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 4566666655444556677778888777654321111111 22 1355666666553 2567777777654333
Q ss_pred CCceeEEEEeCCC-C-CCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-N-PLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-N-PtG~--~~~~~~l~~l~~ 227 (442)
-.+...+ ++|.. . +.+. -.+.+++++..+
T Consensus 82 ~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 82 FGKIDFL-FNNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp HSCCCEE-EECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hCCCCEE-EECCCCCCCCCccccCCHHHHHHHHH
Confidence 2345544 44432 2 2221 245666666554
No 354
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=45.89 E-value=1.2e+02 Score=25.90 Aligned_cols=101 Identities=11% Similarity=0.081 Sum_probs=48.2
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcC--cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG--IKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G--~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... .. .++..+..|- -|.+.+++.++...+..
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKS-VGTPDQIQFFQHDS-----SDEDGWTKLFDATEKAF 80 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hhccCceEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 3466665544333455677777887777654322212222221 11 2344444443 25677777776543322
Q ss_pred CceeEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
.++..++.+.-..+.+. -.+.+++++..+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLA 111 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 34555444432222222 245565655554
No 355
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=45.86 E-value=1.4e+02 Score=26.04 Aligned_cols=100 Identities=19% Similarity=0.242 Sum_probs=53.6
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEc-CCCCcCh---HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVP-TPYYPGF---DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~---~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
..++||.|+...=..+.+.|.+.|..|++. ...-... ...+. ..|.++..+..|- -|.+.+++.+++..+
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE-AAGGKALTAQADV-----SDPAAVRRLFATAEE 101 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHH-HTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH-hcCCeEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 346666655444345567777889888764 2222111 12223 2566777777654 257777777766544
Q ss_pred cCCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
...+... +++|.. .+.+ .-.+.++++++.+
T Consensus 102 ~~g~iD~-lvnnAG~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 3u5t_A 102 AFGGVDV-LVNNAGIMPLTTIAETGDAVFDRVIA 134 (267)
T ss_dssp HHSCEEE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3345554 444442 2222 2345666666555
No 356
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=45.56 E-value=98 Score=27.10 Aligned_cols=100 Identities=12% Similarity=0.143 Sum_probs=52.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-..... .+.. .|.++..+..|- -|.+.+++.+++..++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ-AGLEGRGAVLNV-----NDATAVDALVESTLKE 102 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-HTCCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEEeC-----CCHHHHHHHHHHHHHH
Confidence 345565554443345567778889888766543222222 2221 455555555543 2567777777655433
Q ss_pred CCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
..+... +++|.. .+.+ .-.+.+++++..+
T Consensus 103 ~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (270)
T 3ftp_A 103 FGALNV-LVNNAGITQDQLAMRMKDDEWDAVID 134 (270)
T ss_dssp HSCCCE-EEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred cCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 335554 444442 2222 2356666766655
No 357
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=44.97 E-value=1.4e+02 Score=25.30 Aligned_cols=101 Identities=16% Similarity=0.186 Sum_probs=50.4
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---Hhhh--cCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWR--TGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~--~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-...... +... ....++.++++. -|.+.+++.+++..
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~-----~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN-----ATAQQYRELAARVE 89 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTT-----CCHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecccc-----CCHHHHHHHHHHHH
Confidence 3466666554433455677778888887765433222222 2211 123444444332 35677777766544
Q ss_pred hcCCceeEEEEeCCC--CCCCc--CCCHHHHHHHHH
Q 046900 196 SKDMRVRGVLITNPS--NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~--NPtG~--~~~~~~l~~l~~ 227 (442)
+...++..++ +|.. .+.+. -++.+++++..+
T Consensus 90 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 124 (247)
T 3i1j_A 90 HEFGRLDGLL-HNASIIGPRTPLEQLPDEDFMQVMH 124 (247)
T ss_dssp HHHSCCSEEE-ECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred HhCCCCCEEE-ECCccCCCCCCcccCCHHHHHHHHH
Confidence 3333555544 4432 23221 246666666655
No 358
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=44.81 E-value=1.3e+02 Score=26.26 Aligned_cols=100 Identities=13% Similarity=0.107 Sum_probs=51.1
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... ..| ++..+..|- -|.+.+++.+++..+..
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADL-----SSEAGARRLAQALGELS 103 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCT-----TSHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeC-----CCHHHHHHHHHHHHHhc
Confidence 3466666544433455677778888877754332222222211 123 555555543 25777887777654444
Q ss_pred CceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
.++..+| +|.. ...+. -.+.+++++..+
T Consensus 104 g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 134 (276)
T 2b4q_A 104 ARLDILV-NNAGTSWGAALESYPVSGWEKVMQ 134 (276)
T ss_dssp SCCSEEE-ECCCCCCCCCTTSCCSHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 4566544 4432 22221 245566665554
No 359
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=44.76 E-value=1.3e+02 Score=26.04 Aligned_cols=102 Identities=19% Similarity=0.171 Sum_probs=53.7
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcC-cEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTG-IKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G-~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... ..| .++..+..|- -|.+.+++.+++..+
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDV-----SDRAQCDALAGRAVE 84 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 34566666655444455677788898887765332222222211 123 4566666553 256777777765544
Q ss_pred cCCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
+..++..++ +|.. .+.+ .-.+.+++++..+
T Consensus 85 ~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 85 EFGGIDVVC-ANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp HHSCCSEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HhCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 333555444 4432 2222 2346666666655
No 360
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=44.71 E-value=74 Score=28.76 Aligned_cols=110 Identities=20% Similarity=0.240 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecCh---HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGA---TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~---~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
.+=|.++.+...+.-+. .--|+++.|+ .+++.++-.+---.-|.|++..|.|....
T Consensus 64 ~eEr~~vi~~~~~~~~g-----rvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s---------------- 122 (306)
T 1o5k_A 64 EDEREKLVSRTLEIVDG-----KIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPT---------------- 122 (306)
T ss_dssp HHHHHHHHHHHHHHHTT-----SSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCC----------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCC----------------
Confidence 34455555555443221 1237777775 55555543332113388888888875321
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
.+.+.+.++...+.. ...++++++|. .||..++.+.+.+|++ +--|+.=|=|..
T Consensus 123 ---------~~~l~~~f~~va~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~--~~pnIvgiKdss 176 (306)
T 1o5k_A 123 ---------QEGLYQHYKYISERT-DLGIVVYNVPG-RTGVNVLPETAARIAA--DLKNVVGIXEAN 176 (306)
T ss_dssp ---------HHHHHHHHHHHHTTC-SSCEEEEECHH-HHSCCCCHHHHHHHHH--HCTTEEEEEECC
T ss_pred ---------HHHHHHHHHHHHHhC-CCCEEEEeCcc-ccCcCCCHHHHHHHHH--hCCCEEEEeCCC
Confidence 122222222221111 34578888776 5899999888877763 123554454543
No 361
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=44.59 E-value=1.5e+02 Score=25.27 Aligned_cols=102 Identities=13% Similarity=0.105 Sum_probs=51.6
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCC-CcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPY-YPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~-y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+.+.|.+.|..|++..-. -......... ..|.++..+..|- -|.+.+++.+++..+.
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADL-----ATSEACQQLVDEFVAK 82 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 456666654443344566777788777765433 2222222111 1366666666553 3577888777654433
Q ss_pred CCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
..++..||-+--. .+.+. -.+.+++++..+
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 2345555443222 22222 234555555444
No 362
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=44.55 E-value=1.1e+02 Score=26.54 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=51.7
Q ss_pred CCCcEEEecCh--HHHHHHHHHhhcCCCCeEEEcCCCCcC---hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 119 DLNRIVVTAGA--TAANELLTFILADPGDALLVPTPYYPG---FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 119 ~~~~i~~t~G~--~~ai~~~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
+...|+||.|+ ...=..+.+.|.+.|..|++..-.-.. ....... .+ ++..+..|- -|.+.+++.+++
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~Dv-----~~~~~v~~~~~~ 85 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE-FG-SELVFPCDV-----ADDAQIDALFAS 85 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-TT-CCCEEECCT-----TCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH-cC-CcEEEECCC-----CCHHHHHHHHHH
Confidence 34567777765 333344556777888877765433111 1111221 23 244444443 257788887776
Q ss_pred HHhcCCceeEEEEeCCC-CCC----Cc---CCCHHHHHHHHH
Q 046900 194 AESKDMRVRGVLITNPS-NPL----GA---TIQRSVLEELLD 227 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P~-NPt----G~---~~~~~~l~~l~~ 227 (442)
..++..++..+| +|.. .+. +. -.+.+++++..+
T Consensus 86 ~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (271)
T 3ek2_A 86 LKTHWDSLDGLV-HSIGFAPREAIAGDFLDGLTRENFRIAHD 126 (271)
T ss_dssp HHHHCSCEEEEE-ECCCCCCGGGGSSCTTTTCCHHHHHHHHH
T ss_pred HHHHcCCCCEEE-ECCccCccccccCccccccCHHHHHHHHh
Confidence 655445666544 4432 221 22 155666666555
No 363
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=44.41 E-value=96 Score=26.90 Aligned_cols=100 Identities=15% Similarity=0.196 Sum_probs=55.9
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEE-E--cCCC------C-----cChHHhHhhhcCcEEEEEecCCCCCCcCCHHHH
Q 046900 122 RIVVTAGATAANELLTFILADPGDALL-V--PTPY------Y-----PGFDRDLRWRTGIKIVPIHCDSSNNFQITPQAL 187 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl-~--~~p~------y-----~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l 187 (442)
-+++.+|+......+..+. +.|-.|. + ..|. | ......+. ..|+....+++..+. .--.+++
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~-~LGIpl~~v~~~g~~--~~e~e~l 82 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQAR-ALGIPLVKGFTQGEK--EKEVEDL 82 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHH-HHTCCEEEEEC--------CHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHH-HcCCCEEEEECCCCc--hHHHHHH
Confidence 3677788887777666554 4454332 2 1111 1 11223444 489988888775421 1225667
Q ss_pred HHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEE
Q 046900 188 EAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLV 237 (442)
Q Consensus 188 ~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi 237 (442)
.+++++. .+.+++ +|.+++...+..+-+.|.+.|+..+
T Consensus 83 ~~~l~~~-----~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 83 KRVLSGL-----KIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHHTTS-----CCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhc-----CCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 7766532 344555 7999888888888899999887544
No 364
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=43.75 E-value=81 Score=28.25 Aligned_cols=96 Identities=20% Similarity=0.285 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCcEEEecCh---HHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 99 SFRQAMASFMEQIRGGRAKFDLNRIVVTAGA---TAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 99 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~---~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
+=|..+.+...+.-+. .--|+++.|+ .+++.++- ...+-| |.|++..|.|....
T Consensus 54 ~Er~~v~~~~~~~~~g-----r~pviaGvg~~~t~~ai~la~-~a~~~Gadavlv~~P~y~~~s---------------- 111 (292)
T 2ojp_A 54 DEHADVVMMTLDLADG-----RIPVIAGTGANATAEAISLTQ-RFNDSGIVGCLTVTPYYNRPS---------------- 111 (292)
T ss_dssp HHHHHHHHHHHHHHTT-----SSCEEEECCCSSHHHHHHHHH-HTTTSSCSEEEEECCCSSCCC----------------
T ss_pred HHHHHHHHHHHHHhCC-----CCcEEEecCCccHHHHHHHHH-HHHhcCCCEEEECCCCCCCCC----------------
Confidence 4455555554443221 1237777775 44555443 333344 88998888885321
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHH
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLD 227 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~ 227 (442)
.+.+.+.++...+.. ...++++++|. .||..++.+.+.+|++
T Consensus 112 ---------~~~l~~~f~~ia~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 112 ---------QEGLYQHFKAIAEHT-DLPQILYNVPS-RTGCDLLPETVGRLAK 153 (292)
T ss_dssp ---------HHHHHHHHHHHHTTC-SSCEEEECCHH-HHSCCCCHHHHHHHHT
T ss_pred ---------HHHHHHHHHHHHHhc-CCCEEEEeCcc-hhccCCCHHHHHHHHc
Confidence 122222222221111 34577887776 5899999888877764
No 365
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=43.73 E-value=44 Score=29.39 Aligned_cols=81 Identities=21% Similarity=0.288 Sum_probs=50.4
Q ss_pred eEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHH
Q 046900 146 ALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEEL 225 (442)
Q Consensus 146 ~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l 225 (442)
.|+++...|.+....+...... +.+|+-. -+|-+|+-++.++-.- ...+|+|. -.+++.++++++
T Consensus 81 SVLTd~~~F~Gs~~~L~~vr~~--v~lPvLr-KDFiid~yQI~eAr~~------GADaILLI------~a~L~~~~l~~l 145 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKIASS--VSIPILM-SDFIVKESQIDDAYNL------GADTVLLI------VKILTERELESL 145 (258)
T ss_dssp EEECCSTTTCCCHHHHHHHHTT--CSSCEEE-ESCCCSHHHHHHHHHH------TCSEEEEE------GGGSCHHHHHHH
T ss_pred EEeCCCCCCCCCHHHHHHHHHh--cCCCEee-ccccccHHHHHHHHHc------CCCeeehH------HhhcCHHHHHHH
Confidence 4666667776655443321111 1223221 2588998887776543 44566553 456888999999
Q ss_pred HHHHHhcCcEEEEeccC
Q 046900 226 LDFATRKNIHLVSDEIY 242 (442)
Q Consensus 226 ~~~~~~~~~~vi~De~y 242 (442)
.+.|.+.|+-+++ |++
T Consensus 146 ~~~A~~lGl~~Lv-EVh 161 (258)
T 4a29_A 146 LEYARSYGMEPLI-LIN 161 (258)
T ss_dssp HHHHHHTTCCCEE-EES
T ss_pred HHHHHHHhHHHHH-hcc
Confidence 9999999877666 444
No 366
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=43.62 E-value=1.2e+02 Score=26.99 Aligned_cols=102 Identities=10% Similarity=0.051 Sum_probs=54.9
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCc-C----hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYP-G----FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEA 194 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~-~----~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~ 194 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-. . ....+. ..|.++..+..|- -|.+.+++.+++.
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIE-ECGRKAVLLPGDL-----SDESFARSLVHKA 122 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHH-HTTCCEEECCCCT-----TSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHH-HcCCcEEEEEecC-----CCHHHHHHHHHHH
Confidence 344666666554444556778888988876432211 1 112223 2566777776654 2567777777655
Q ss_pred HhcCCceeEEEEeCCC--CCCC--cCCCHHHHHHHHHH
Q 046900 195 ESKDMRVRGVLITNPS--NPLG--ATIQRSVLEELLDF 228 (442)
Q Consensus 195 ~~~~~~~~~v~l~~P~--NPtG--~~~~~~~l~~l~~~ 228 (442)
.++..+...++ +|.. .+.+ .-++.+++++..+.
T Consensus 123 ~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 123 REALGGLDILA-LVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HHHHTCCCEEE-ECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 43333556444 4433 2222 23466767666653
No 367
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=43.54 E-value=1e+02 Score=27.20 Aligned_cols=82 Identities=16% Similarity=0.064 Sum_probs=42.2
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCC-cChHHhHhh---hcCcEEEEEecCCCCCCcCC----HHHHHHHHHH
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYY-PGFDRDLRW---RTGIKIVPIHCDSSNNFQIT----PQALEAAYKE 193 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~---~~G~~v~~v~~~~~~~~~~d----~~~l~~~l~~ 193 (442)
.++||.|+...=..+.+.|.+.|..|++..-.- ......... ..|.++..+..|- -| .+.+++.+++
T Consensus 25 ~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 25 AAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADL-----TNSNVLPASCEEIINS 99 (288)
T ss_dssp EEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC-----SCSTTHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeec-----CCccCCHHHHHHHHHH
Confidence 456665544333455677777887777654332 222221111 1355666666553 24 6777777765
Q ss_pred HHhcCCceeEEEEeCC
Q 046900 194 AESKDMRVRGVLITNP 209 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P 209 (442)
..+...+..+ +++|.
T Consensus 100 ~~~~~g~iD~-lvnnA 114 (288)
T 2x9g_A 100 CFRAFGRCDV-LVNNA 114 (288)
T ss_dssp HHHHHSCCCE-EEECC
T ss_pred HHHhcCCCCE-EEECC
Confidence 4333234554 44444
No 368
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=43.11 E-value=1.3e+02 Score=26.46 Aligned_cols=101 Identities=15% Similarity=0.115 Sum_probs=53.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... ..|.++..+..|- -|.+.+++.+++..++.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDV-----GDEALHEALVELAVRRF 83 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 3455655544333455677888898888765433222222221 1356676766553 25677777776554333
Q ss_pred CceeEEEEeCCC--CCCCc--CCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPS--NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~--NPtG~--~~~~~~l~~l~~ 227 (442)
.+... +++|.. .+.+. -.+.+++++..+
T Consensus 84 g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 3tox_A 84 GGLDT-AFNNAGALGAMGEISSLSVEGWRETLD 115 (280)
T ss_dssp SCCCE-EEECCCCCCSCSCGGGCCHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 35554 444442 12222 346666666655
No 369
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=42.89 E-value=1.3e+02 Score=25.39 Aligned_cols=100 Identities=8% Similarity=0.102 Sum_probs=49.0
Q ss_pred EEEecChHHHHHHHHHhhcCCCC-------eEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 123 IVVTAGATAANELLTFILADPGD-------ALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd-------~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
++||.|+...=..+...|.+.|. .|++..-.-......... ..+.++..+..|- -|.+.+++.+++
T Consensus 5 vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~ 79 (244)
T 2bd0_A 5 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADI-----SDMADVRRLTTH 79 (244)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCT-----TSHHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecC-----CCHHHHHHHHHH
Confidence 56665544333445566666676 666544322111111111 1366666666553 257778877766
Q ss_pred HHhcCCceeEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 194 AESKDMRVRGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
..+...++..++.+.-..+.+. -.+.+++++..+
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMN 115 (244)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHH
Confidence 5444345665554422222221 235555655544
No 370
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=42.63 E-value=1.1e+02 Score=27.50 Aligned_cols=102 Identities=20% Similarity=0.176 Sum_probs=54.1
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCc--EEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGI--KIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~--~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
..++||.|+...=..+...|.+.|..|++..-.-......... ..|. ++..+..|- -|.+.+++++....+
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDV-----ASREGFKMAADEVEA 83 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 3566666654444455677778898887765433222222211 1232 566666553 357778877776554
Q ss_pred cCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPS-NPLGA--TIQRSVLEELLDF 228 (442)
Q Consensus 197 ~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~~ 228 (442)
...++.+ +++|.. .+.+. ..+.++++++.+.
T Consensus 84 ~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 117 (319)
T 3ioy_A 84 RFGPVSI-LCNNAGVNLFQPIEESSYDDWDWLLGV 117 (319)
T ss_dssp HTCCEEE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hCCCCCE-EEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 4445664 444443 22222 2355666666553
No 371
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=41.68 E-value=70 Score=23.30 Aligned_cols=90 Identities=14% Similarity=0.166 Sum_probs=49.5
Q ss_pred cEEEecChHHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 122 RIVVTAGATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
.|+++.++.-+..++ ..|...| ..|.+.+..-.... .+. ..|...+..+. -+.+.+++.+. +
T Consensus 7 ~v~I~G~G~iG~~~~-~~l~~~g~~~v~~~~r~~~~~~-~~~-~~~~~~~~~d~-------~~~~~~~~~~~-------~ 69 (118)
T 3ic5_A 7 NICVVGAGKIGQMIA-ALLKTSSNYSVTVADHDLAALA-VLN-RMGVATKQVDA-------KDEAGLAKALG-------G 69 (118)
T ss_dssp EEEEECCSHHHHHHH-HHHHHCSSEEEEEEESCHHHHH-HHH-TTTCEEEECCT-------TCHHHHHHHTT-------T
T ss_pred eEEEECCCHHHHHHH-HHHHhCCCceEEEEeCCHHHHH-HHH-hCCCcEEEecC-------CCHHHHHHHHc-------C
Confidence 566666555555444 4455567 56666554322222 222 25666554432 24577777654 4
Q ss_pred eeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEE
Q 046900 201 VRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLV 237 (442)
Q Consensus 201 ~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi 237 (442)
..+++.+.|.. .-..+++.|.+.++..+
T Consensus 70 ~d~vi~~~~~~---------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 70 FDAVISAAPFF---------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp CSEEEECSCGG---------GHHHHHHHHHHTTCEEE
T ss_pred CCEEEECCCch---------hhHHHHHHHHHhCCCEE
Confidence 56677665422 13677788888887654
No 372
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=41.54 E-value=1.6e+02 Score=24.83 Aligned_cols=99 Identities=17% Similarity=0.167 Sum_probs=49.6
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEc-CCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVP-TPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
|+||.|+...=..+.+.|.+.|..|++. .-.-..... .+.. .|.++..+..|- -|.+.+++.+++..+..
T Consensus 4 vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDV-----SKEADVEAMMKTAIDAW 77 (244)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-HTCEEEEEECCT-----TSHHHHHHHHHHHHHHS
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEeCCC-----CCHHHHHHHHHHHHHHc
Confidence 5555554433344566777788777762 322111111 1221 366666666553 25778888777654433
Q ss_pred CceeEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
.++..++-+--..+.+. -.+.+++++..+
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (244)
T 1edo_A 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVID 108 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 45565444322222221 235555555544
No 373
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=41.24 E-value=61 Score=29.01 Aligned_cols=40 Identities=10% Similarity=0.163 Sum_probs=21.8
Q ss_pred hHHhHhhhcCcEEEEEecCCCCCCcC-CHHHHHHHHHHHHhc
Q 046900 157 FDRDLRWRTGIKIVPIHCDSSNNFQI-TPQALEAAYKEAESK 197 (442)
Q Consensus 157 ~~~~~~~~~G~~v~~v~~~~~~~~~~-d~~~l~~~l~~~~~~ 197 (442)
....++ ..|++.+.+|+.....|.. ..+.+++.+....+.
T Consensus 37 ~~~~lk-~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~ 77 (302)
T 1bqc_A 37 AFADIK-SHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQN 77 (302)
T ss_dssp HHHHHH-HTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHH-HcCCCEEEEEccCCcccCCCCHHHHHHHHHHHHHC
Confidence 344556 3899999998764322221 244555555544433
No 374
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=41.22 E-value=1.7e+02 Score=25.11 Aligned_cols=101 Identities=16% Similarity=0.151 Sum_probs=50.5
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hc--CcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RT--GIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~--G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... .. +.++..+..|- -|.+.+++.+++..+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDI-----REPGDIDRLFEKARD 82 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 3466666554433455677777888777654322212222111 01 33555555543 267888887776554
Q ss_pred cCCceeEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
... ...++-+....+.+. -.+.+++++..+
T Consensus 83 ~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (260)
T 2z1n_A 83 LGG-ADILVYSTGGPRPGRFMELGVEDWDESYR 114 (260)
T ss_dssp TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 433 555443322222221 245556655544
No 375
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=41.10 E-value=1.6e+02 Score=25.50 Aligned_cols=98 Identities=16% Similarity=0.199 Sum_probs=51.0
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEc-CCCCcCh---HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVP-TPYYPGF---DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~---~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
++||.|+...=..+.+.|.+.|..|++. .-.-... ...+. ..+.++..+..|- -|.+.+++.+++..+..
T Consensus 29 vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 29 VLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAIT-ESGGEAVAIPGDV-----GNAADIAAMFSAVDRQF 102 (272)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCEEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHH-hcCCcEEEEEcCC-----CCHHHHHHHHHHHHHhC
Confidence 5555544433344567778889887654 3222211 12233 2567777777664 35677777776654333
Q ss_pred CceeEEEEeCCC-CCC-C--cCCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPS-NPL-G--ATIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~-NPt-G--~~~~~~~l~~l~~ 227 (442)
.++..+| +|.. ... + .-++.+++++..+
T Consensus 103 g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (272)
T 4e3z_A 103 GRLDGLV-NNAGIVDYPQRVDEMSVERIERMLR 134 (272)
T ss_dssp SCCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCCChhhCCHHHHHHHHh
Confidence 3555444 4432 111 2 1236666666555
No 376
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=41.07 E-value=1.6e+02 Score=25.42 Aligned_cols=99 Identities=13% Similarity=0.099 Sum_probs=49.9
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC-hHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPG-FDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~-~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
++||.|+...=..+.+.|.+.|-.|++..-.-.. ... ... ..|.++..+..|- -|.+.+++.+++..+..
T Consensus 28 vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 28 AFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHER-DAGRDFKAYAVDV-----ADFESCERCAEKVLADF 101 (269)
T ss_dssp EEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHH-TTTCCCEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHH-hcCCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 4555444433344567788889887765422211 111 122 1355566666553 25677777776554433
Q ss_pred CceeEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
.+...+|.+--....+. -.+.+++++..+
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 132 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKMTKGDWDAVMR 132 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCcchhhCCHHHHHHHHH
Confidence 35565443322222222 346666666554
No 377
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=40.77 E-value=1.3e+02 Score=26.33 Aligned_cols=83 Identities=8% Similarity=0.224 Sum_probs=42.1
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCc---EEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGI---KIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~---~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... ..|. ++..+..|- -|.+.+++.+++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV-----TTEDGQDQIINSTL 81 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecC-----CCHHHHHHHHHHHH
Confidence 3466666554433455677778888777654322212221111 1233 455555543 25677777776543
Q ss_pred hcCCceeEEEEeCC
Q 046900 196 SKDMRVRGVLITNP 209 (442)
Q Consensus 196 ~~~~~~~~v~l~~P 209 (442)
++..++..+ ++|.
T Consensus 82 ~~~g~iD~l-v~nA 94 (280)
T 1xkq_A 82 KQFGKIDVL-VNNA 94 (280)
T ss_dssp HHHSCCCEE-EECC
T ss_pred HhcCCCCEE-EECC
Confidence 332345544 4443
No 378
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=40.47 E-value=65 Score=27.30 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=50.7
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
++||.|+...=..+.+.|.+.|..|++..-.-........ ..+.++..+..|- -|.+.+++.+.+... ...
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~---~~d 74 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN-CLSNNVGYRARDL-----ASHQEVEQLFEQLDS---IPS 74 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TCSSCCCEEECCT-----TCHHHHHHHHHSCSS---CCS
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhhccCeEeecC-----CCHHHHHHHHHHHhh---cCC
Confidence 6666665544445567777888777776544333333333 2444555555443 257788887764321 123
Q ss_pred EEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 203 GVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 203 ~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
++++|.. .+.+. -.+.+++++..+
T Consensus 75 -~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 101 (230)
T 3guy_A 75 -TVVHSAGSGYFGLLQEQDPEQIQTLIE 101 (230)
T ss_dssp -EEEECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred -EEEEeCCcCCCCccccCCHHHHHHHHH
Confidence 4455543 22222 346666666655
No 379
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=40.36 E-value=1.9e+02 Score=25.27 Aligned_cols=82 Identities=12% Similarity=0.033 Sum_probs=41.1
Q ss_pred CCcEEEecCh--HHHHHHHHHhhcCCCCeEEEcCCCC-cChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGA--TAANELLTFILADPGDALLVPTPYY-PGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~--~~ai~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+ +..=..+.+.|.+.|..|++..-.- ......+.. .+.++..+..|- -|.+.+++.+++..+
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCA-EFNPAAVLPCDV-----ISDQEIKDLFVELGK 99 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHG-GGCCSEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHH-hcCCceEEEeec-----CCHHHHHHHHHHHHH
Confidence 3456666644 2222344566777887777654332 111112221 122344455443 257788887776654
Q ss_pred cCCceeEEEEe
Q 046900 197 KDMRVRGVLIT 207 (442)
Q Consensus 197 ~~~~~~~v~l~ 207 (442)
...++..+|.+
T Consensus 100 ~~g~id~li~n 110 (280)
T 3nrc_A 100 VWDGLDAIVHS 110 (280)
T ss_dssp HCSSCCEEEEC
T ss_pred HcCCCCEEEEC
Confidence 44456654443
No 380
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=40.04 E-value=1.4e+02 Score=27.07 Aligned_cols=89 Identities=19% Similarity=0.279 Sum_probs=48.6
Q ss_pred cEEEecCh---HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 122 RIVVTAGA---TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 122 ~i~~t~G~---~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
-|+++.|+ .+++.++-.+---.-|.|++..|.|....+ +.+.+.++...+..
T Consensus 94 pViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~-------------------------~~l~~~f~~va~a~ 148 (314)
T 3qze_A 94 PVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQ-------------------------EGMYQHFRHIAEAV 148 (314)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH-------------------------HHHHHHHHHHHHHS
T ss_pred cEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH-------------------------HHHHHHHHHHHHhc
Confidence 37777664 455554433322233888888888754221 22222222111111
Q ss_pred CceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 199 MRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 199 ~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
+..++++++|.. ||..++.+.+.+|++ --|+.=|=|.
T Consensus 149 -~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKds 185 (314)
T 3qze_A 149 -AIPQILYNVPGR-TSCDMLPETVERLSK---VPNIIGIKEA 185 (314)
T ss_dssp -CSCEEEEECHHH-HSCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred -CCCEEEEeCccc-cCCCCCHHHHHHHhc---CCCEEEEEcC
Confidence 456788887764 899999888777764 2355545553
No 381
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=39.97 E-value=97 Score=27.06 Aligned_cols=82 Identities=9% Similarity=0.106 Sum_probs=40.7
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh-----hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW-----RTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-----~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-......... ..+.++..+..|- -|.+.+++.+++..+
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 8 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV-----TTDAGQDEILSTTLG 82 (278)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEeccc-----CCHHHHHHHHHHHHH
Confidence 455655544333455677778888777654322111211111 0233455555543 256777777765433
Q ss_pred cCCceeEEEEeCC
Q 046900 197 KDMRVRGVLITNP 209 (442)
Q Consensus 197 ~~~~~~~v~l~~P 209 (442)
+..+...+ ++|.
T Consensus 83 ~~g~id~l-v~~A 94 (278)
T 1spx_A 83 KFGKLDIL-VNNA 94 (278)
T ss_dssp HHSCCCEE-EECC
T ss_pred HcCCCCEE-EECC
Confidence 32345544 4443
No 382
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=39.54 E-value=1.3e+02 Score=26.64 Aligned_cols=101 Identities=11% Similarity=0.189 Sum_probs=50.3
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCc---EEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGI---KIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~---~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... ..|. ++..+..|- -|.+.+++.+++..
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV-----TEASGQDDIINTTL 101 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCC-----CCHHHHHHHHHHHH
Confidence 3466665554433456677778888877654322212221110 1233 455555543 25677777776543
Q ss_pred hcCCceeEEEEeCCC-CCCCc----CCCHHHHHHHHH
Q 046900 196 SKDMRVRGVLITNPS-NPLGA----TIQRSVLEELLD 227 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~-NPtG~----~~~~~~l~~l~~ 227 (442)
++..++.++ ++|.. ...+. -.+.+++++..+
T Consensus 102 ~~~g~iD~l-vnnAG~~~~~~~~~~~~~~~~~~~~~~ 137 (297)
T 1xhl_A 102 AKFGKIDIL-VNNAGANLADGTANTDQPVELYQKTFK 137 (297)
T ss_dssp HHHSCCCEE-EECCCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred HhcCCCCEE-EECCCcCcCCCCccccCCHHHHHHHHh
Confidence 332345544 44432 22221 245566665554
No 383
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=39.27 E-value=1.5e+02 Score=29.89 Aligned_cols=110 Identities=11% Similarity=0.125 Sum_probs=63.2
Q ss_pred CccCCCcEEEecChHHHHHHHHHhhc---CCC--CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHH
Q 046900 116 AKFDLNRIVVTAGATAANELLTFILA---DPG--DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAA 190 (442)
Q Consensus 116 ~~~~~~~i~~t~G~~~ai~~~~~~l~---~~g--d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~ 190 (442)
+.++++.|.|+.++..++...+++|. ..+ ...+.+.|.|+- .|+ .+++. .+--+.++.+.+.
T Consensus 41 L~i~~~~i~I~a~~~~G~~~glqTL~QL~~~~~~~~~I~D~P~f~~--------RG~---mlD~s--R~~f~~~~~ik~~ 107 (627)
T 2epl_X 41 VEGRQGYYQVSYKQPHQLYRALALLSAALRSGQDEVQIEEEAAYED--------LAY---MADCS--RNAVLNLSSAKKM 107 (627)
T ss_dssp EEEETTEEEEEESSTTHHHHHHHHHHHHHHTTCSSEEEEECCSCSE--------EEE---EEECS--SSCCBCHHHHHHH
T ss_pred EEEeCCEEEEEECCHHHHHHHHHHHHHHhhcCCCceEEEeCCCCCc--------cce---EEecC--CCCCCCHHHHHHH
Confidence 34567788888776666655554442 222 234445555531 222 22221 1201466777777
Q ss_pred HHHHHhcCCceeEEEEeC----CCCC----CCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 191 YKEAESKDMRVRGVLITN----PSNP----LGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 191 l~~~~~~~~~~~~v~l~~----P~NP----tG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
|..-...+.++-.+-+++ +..| .|..|+.+++++|++.|+++++-||-
T Consensus 108 id~ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~rgI~VIP 163 (627)
T 2epl_X 108 IEVLALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADFDMSFVP 163 (627)
T ss_dssp HHHHHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 765443344433333333 2334 46789999999999999999987764
No 384
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=39.23 E-value=1.9e+02 Score=25.14 Aligned_cols=102 Identities=14% Similarity=0.156 Sum_probs=53.8
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCc---EEEEEecCCCCCCcCCHHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGI---KIVPIHCDSSNNFQITPQALEAAYKEA 194 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~---~v~~v~~~~~~~~~~d~~~l~~~l~~~ 194 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-......... ..|. ++..+..|- -|.+.+++.+++.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 85 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI-----TNEDETARAVDAV 85 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCC-----CCHHHHHHHHHHH
Confidence 34566666655444455677888898887764332222222111 1333 666666553 3577777777765
Q ss_pred HhcCCceeEEEEeCCC--CCCC--cCCCHHHHHHHHH
Q 046900 195 ESKDMRVRGVLITNPS--NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 195 ~~~~~~~~~v~l~~P~--NPtG--~~~~~~~l~~l~~ 227 (442)
.++..+...+ ++|.. .+.+ .-.+.+++++..+
T Consensus 86 ~~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 121 (281)
T 3svt_A 86 TAWHGRLHGV-VHCAGGSENIGPITQVDSEAWRRTVD 121 (281)
T ss_dssp HHHHSCCCEE-EECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEE-EECCCcCCCCCCcccCCHHHHHHHHH
Confidence 4433355544 44432 2222 2346666666554
No 385
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=39.01 E-value=1.7e+02 Score=25.73 Aligned_cols=101 Identities=15% Similarity=0.227 Sum_probs=50.2
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--h-----cCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--R-----TGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~-----~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
..++||.|+...=..+...|.+.|..|++..-.-......... . .+.++..+..|- -|.+.+++.+++
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~ 93 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI-----RNEEEVNNLVKS 93 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCC-----CCHHHHHHHHHH
Confidence 4566766554433455677777887777654322211111110 0 245566666553 256777777765
Q ss_pred HHhcCCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 194 AESKDMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
..+...++..|| +|.. .+.+ .-.+.+++++..+
T Consensus 94 ~~~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 129 (303)
T 1yxm_A 94 TLDTFGKINFLV-NNGGGQFLSPAEHISSKGWHAVLE 129 (303)
T ss_dssp HHHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEE-ECCCCCCCCchhhCCHHHHHHHHH
Confidence 433223455544 4432 2222 1245555555544
No 386
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=38.94 E-value=1.4e+02 Score=26.51 Aligned_cols=109 Identities=13% Similarity=0.159 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCC
Q 046900 100 FRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNN 179 (442)
Q Consensus 100 lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~ 179 (442)
|++.|.-+-. .+|.+..|+|=+=..+ ..| .+..|...|+. .|++.+.+. ++.
T Consensus 82 l~ekI~l~~~-----------~gV~v~~GGTlfE~~l-----~qg--------~~~~yl~~~k~-lGF~~IEIS---dGt 133 (276)
T 1u83_A 82 LEEKISTLKE-----------HDITFFFGGTLFEKYV-----SQK--------KVNEFHRYCTY-FGCEYIEIS---NGT 133 (276)
T ss_dssp HHHHHHHHHH-----------TTCEEEECHHHHHHHH-----HTT--------CHHHHHHHHHH-TTCSEEEEC---CSS
T ss_pred HHHHHHHHHH-----------cCCeEeCCcHHHHHHH-----HcC--------cHHHHHHHHHH-cCCCEEEEC---CCc
Confidence 7777776543 3488999987332222 233 57778899995 999999987 445
Q ss_pred CcCCHHHHHHHHHHHHhcCCceeEEEEeCCC--CC-CCcCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 180 FQITPQALEAAYKEAESKDMRVRGVLITNPS--NP-LGATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 180 ~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~--NP-tG~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
..++.+...+.+++..+ . ..+++.-. +| .....+.+++.+.++.+-+.|+..|+=|+
T Consensus 134 i~l~~~~~~~lI~~a~~---~--f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 193 (276)
T 1u83_A 134 LPMTNKEKAAYIADFSD---E--FLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEA 193 (276)
T ss_dssp SCCCHHHHHHHHHHHTT---T--SEEEEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC-
T ss_pred ccCCHHHHHHHHHHHHh---h--cEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEee
Confidence 66889999999987532 2 33444332 33 34556667777788777778888777776
No 387
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=38.70 E-value=50 Score=25.97 Aligned_cols=59 Identities=17% Similarity=0.107 Sum_probs=41.1
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHH-HHHHHHHH-HhcCc-EEEEeccCCc
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSV-LEELLDFA-TRKNI-HLVSDEIYSG 244 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~-l~~l~~~~-~~~~~-~vi~De~y~~ 244 (442)
..+.+.|.+.++++ ++..+|+--|-|+.|..-+..+ .+++++.. ++.++ +..+||-+..
T Consensus 39 ~~~~~~l~~li~e~-----~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlTT 100 (138)
T 1nu0_A 39 TPDWNIIERLLKEW-----QPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLST 100 (138)
T ss_dssp EECHHHHHHHHHHH-----CCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_pred chHHHHHHHHHHHc-----CCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 45789999999986 6778999999888886543332 34444433 23454 4589999874
No 388
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=38.41 E-value=1.2e+02 Score=25.50 Aligned_cols=99 Identities=10% Similarity=-0.000 Sum_probs=46.3
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.|+||.|+...=..+...|.+.|..|++..-.-...........++.++ ..|- -|.+.+++.+++..+...++
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~D~-----~~~~~~~~~~~~~~~~~~~i 79 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPL--PGDV-----REEGDWARAVAAMEEAFGEL 79 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEE--ECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEE--EecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3666655444334556677778877776543222222222211134443 3332 25677777766543322245
Q ss_pred eEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 202 RGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 202 ~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
..++-+.-..+.+. -.+.+++++..+
T Consensus 80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 107 (234)
T 2ehd_A 80 SALVNNAGVGVMKPVHELTLEEWRLVLD 107 (234)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 55443322222221 235555555544
No 389
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=38.36 E-value=1.6e+02 Score=25.56 Aligned_cols=100 Identities=18% Similarity=0.191 Sum_probs=49.2
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-...........+ +..+..|- -|.+.+++.+++..++..
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 81 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG--AVFILCDV-----TQEDDVKTLVSETIRRFG 81 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT--EEEEECCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CeEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 34567776655444556677778888777654321112222221123 33444442 256777777765433323
Q ss_pred ceeEEEEeCCC-C-CCCc--CCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-N-PLGA--TIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-N-PtG~--~~~~~~l~~l~~ 227 (442)
+...+ ++|.. . +.+. -.+.++++++.+
T Consensus 82 ~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (270)
T 1yde_A 82 RLDCV-VNNAGHHPPPQRPEETSAQGFRQLLE 112 (270)
T ss_dssp CCCEE-EECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCCCcccCCHHHHHHHHH
Confidence 45544 44442 1 2221 235566665554
No 390
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=38.07 E-value=77 Score=27.38 Aligned_cols=96 Identities=19% Similarity=0.111 Sum_probs=50.5
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|++..=..+.+.|.+.|..|++..- ........ .+.++..+..|- -|.+.+++.++...+ ..+
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~~-~~~~~~~~~~D~-----~~~~~v~~~~~~~~~-~g~ 79 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVAD-LGDRARFAAADV-----TDEAAVASALDLAET-MGT 79 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES---SCHHHHHH-TCTTEEEEECCT-----TCHHHHHHHHHHHHH-HSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---chHHHHHh-cCCceEEEECCC-----CCHHHHHHHHHHHHH-hCC
Confidence 34566655444334556777788887776543 22333342 566666666654 256777776664433 235
Q ss_pred eeEEEEeCCC-CCCCc------CCCHHHHHHHHH
Q 046900 201 VRGVLITNPS-NPLGA------TIQRSVLEELLD 227 (442)
Q Consensus 201 ~~~v~l~~P~-NPtG~------~~~~~~l~~l~~ 227 (442)
... +++|.. .+.+. .++.+++++..+
T Consensus 80 id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
T 3tl3_A 80 LRI-VVNCAGTGNAIRVLSRDGVFSLAAFRKIVD 112 (257)
T ss_dssp EEE-EEECGGGSHHHHHHHHTCCCSHHHHHHHHH
T ss_pred CCE-EEECCCCCCCcccccccccCCHHHHHHHHH
Confidence 554 444432 11110 156666666655
No 391
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=37.86 E-value=1.3e+02 Score=27.17 Aligned_cols=108 Identities=22% Similarity=0.314 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecCh---HHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEe
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGA---TAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIH 173 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~---~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~ 173 (442)
.+=|..+.+...+.-+. .--|+++.|+ .+++.++-.+- +-| |.|++..|.|....+
T Consensus 68 ~~Er~~v~~~~~~~~~g-----rvpviaGvg~~st~~ai~la~~A~-~~Gadavlv~~P~y~~~~~-------------- 127 (304)
T 3cpr_A 68 AAEKLELLKAVREEVGD-----RAKLIAGVGTNNTRTSVELAEAAA-SAGADGLLVVTPYYSKPSQ-------------- 127 (304)
T ss_dssp HHHHHHHHHHHHHHHTT-----TSEEEEECCCSCHHHHHHHHHHHH-HTTCSEEEEECCCSSCCCH--------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCcEEecCCCCCHHHHHHHHHHHH-hcCCCEEEECCCCCCCCCH--------------
Confidence 34455555554433221 1237777775 55555553332 334 889888888753211
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
+.+.+.++...+.. ...++++++|.. ||..++.+.+.+|++ --|+.=|=|..
T Consensus 128 -----------~~l~~~f~~ia~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKdss 179 (304)
T 3cpr_A 128 -----------EGLLAHFGAIAAAT-EVPICLYDIPGR-SGIPIESDTMRRLSE---LPTILAVXDAK 179 (304)
T ss_dssp -----------HHHHHHHHHHHHHC-CSCEEEEECHHH-HSSCCCHHHHHHHTT---STTEEEEEECS
T ss_pred -----------HHHHHHHHHHHHhc-CCCEEEEeCccc-cCcCCCHHHHHHHHc---CCCEEEEecCC
Confidence 11221111111111 345778887763 788899887777754 23554454543
No 392
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=37.73 E-value=1.8e+02 Score=26.29 Aligned_cols=95 Identities=20% Similarity=0.250 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCCCccCCCcEEEecC---hHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCC
Q 046900 101 RQAMASFMEQIRGGRAKFDLNRIVVTAG---ATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS 177 (442)
Q Consensus 101 r~~ia~~l~~~~~~~~~~~~~~i~~t~G---~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~ 177 (442)
|.++.+...+.-+.+++ |+++.| ..+++.++-.+---.-|.|++..|.|....+.--.
T Consensus 77 r~~v~~~~v~~~~grvp-----ViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~-------------- 137 (315)
T 3si9_A 77 HKRIIELCVEQVAKRVP-----VVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLY-------------- 137 (315)
T ss_dssp HHHHHHHHHHHHTTSSC-----BEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH--------------
T ss_pred HHHHHHHHHHHhCCCCc-----EEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH--------------
Q ss_pred CCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHH
Q 046900 178 NNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLD 227 (442)
Q Consensus 178 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~ 227 (442)
+.+++..+.. ...++++++|. .||..++.+.+.+|++
T Consensus 138 -------~~f~~va~a~-----~lPiilYn~P~-~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 138 -------THFSSIAKAI-----SIPIIIYNIPS-RSVIDMAVETMRDLCR 174 (315)
T ss_dssp -------HHHHHHHHHC-----SSCEEEEECHH-HHSCCCCHHHHHHHHH
T ss_pred -------HHHHHHHHcC-----CCCEEEEeCch-hhCCCCCHHHHHHHHh
No 393
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=37.69 E-value=86 Score=27.00 Aligned_cols=98 Identities=13% Similarity=0.107 Sum_probs=49.8
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCcee
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVR 202 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (442)
++||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++..++..+..
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD 76 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDE-LGDNLYIAQLDV-----RNRAAIEEMLASLPAEWCNID 76 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HCTTEEEEECCT-----TCHHHHHHHHHTSCTTTCCCC
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hcCceEEEEcCC-----CCHHHHHHHHHHHHHhCCCCC
Confidence 45555443333445567777888777654322222222221 344455555543 367888888775433333455
Q ss_pred EEEEeCCCC--CCC--cCCCHHHHHHHHH
Q 046900 203 GVLITNPSN--PLG--ATIQRSVLEELLD 227 (442)
Q Consensus 203 ~v~l~~P~N--PtG--~~~~~~~l~~l~~ 227 (442)
. +++|..- +.+ .-.+.+++++..+
T Consensus 77 ~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 104 (248)
T 3asu_A 77 I-LVNNAGLALGMEPAHKASVEDWETMID 104 (248)
T ss_dssp E-EEECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred E-EEECCCcCCCCCchhhCCHHHHHHHHH
Confidence 4 4444431 112 2345666666555
No 394
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=37.59 E-value=79 Score=28.06 Aligned_cols=102 Identities=8% Similarity=0.141 Sum_probs=52.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCC---eEEEcCCCCcChHHhHhh---h-cCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 121 NRIVVTAGATAANELLTFILADPGD---ALLVPTPYYPGFDRDLRW---R-TGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd---~Vl~~~p~y~~~~~~~~~---~-~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
..++||.|+...=..+.+.|.+.|. .|++..-.-......... . .|.++..+..|- -|.+.+++.+++
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~ 108 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDI-----TQAEKIKPFIEN 108 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCT-----TCGGGHHHHHHT
T ss_pred CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCC-----CCHHHHHHHHHH
Confidence 3466665544333445566666664 666654332222222211 0 266777777664 256778877775
Q ss_pred HHhcCCceeEEEEeCCC-C-CCCc--CCCHHHHHHHHHH
Q 046900 194 AESKDMRVRGVLITNPS-N-PLGA--TIQRSVLEELLDF 228 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P~-N-PtG~--~~~~~~l~~l~~~ 228 (442)
..++..++.. +++|.. . +.+. -++.++++++.+.
T Consensus 109 ~~~~~g~iD~-lVnnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 109 LPQEFKDIDI-LVNNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp SCGGGCSCCE-EEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HHHhcCCCCE-EEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 4333335554 444443 2 2222 3466777766653
No 395
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=37.54 E-value=2.7e+02 Score=26.27 Aligned_cols=106 Identities=14% Similarity=0.097 Sum_probs=55.7
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHH-HHHHhhcC-CCCeEEEcCCCCcC---------------
Q 046900 94 YHGLKSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANE-LLTFILAD-PGDALLVPTPYYPG--------------- 156 (442)
Q Consensus 94 ~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~-~~~~~l~~-~gd~Vl~~~p~y~~--------------- 156 (442)
|.|...-.+.--+|.+..- .+. ....+++..|++.+|= .+...|.. .|-.|++..-.-..
T Consensus 23 p~gc~~~v~~qi~~~~~~~--~~~-~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~ 99 (405)
T 3zu3_A 23 PTGCEANVKKQIDYVTTEG--PIA-NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAA 99 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHC--CCT-TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcC--CcC-CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHH
Confidence 4455553333345666531 121 2334444444444543 45567777 78777654221111
Q ss_pred hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCC
Q 046900 157 FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNP 209 (442)
Q Consensus 157 ~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P 209 (442)
....+. ..|.++..+..|- -|.+.+++.+.+..++-.+..+ +++|-
T Consensus 100 ~~~~~~-~~G~~a~~i~~Dv-----td~~~v~~~v~~i~~~~G~IDi-LVNNA 145 (405)
T 3zu3_A 100 FHKFAA-QKGLYAKSINGDA-----FSDEIKQLTIDAIKQDLGQVDQ-VIYSL 145 (405)
T ss_dssp HHHHHH-HTTCCEEEEESCT-----TSHHHHHHHHHHHHHHTSCEEE-EEECC
T ss_pred HHHHHH-hcCCceEEEECCC-----CCHHHHHHHHHHHHHHcCCCCE-EEEcC
Confidence 122334 2677777777664 3678888887766555556664 44553
No 396
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=37.46 E-value=1.6e+02 Score=25.30 Aligned_cols=79 Identities=18% Similarity=0.206 Sum_probs=40.7
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCC-CCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTP-YYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p-~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
..|+||.|+...=..+.+.|.+.|..|++..- .-..... .+. ..|.++..+..|- -|.+.+++.+++...
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELK-KLGAQGVAIQADI-----SKPSEVVALFDKAVS 95 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHH-hcCCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 34666655443334456677778877776432 2111111 122 1366666666553 256777777765433
Q ss_pred cCCceeEEE
Q 046900 197 KDMRVRGVL 205 (442)
Q Consensus 197 ~~~~~~~v~ 205 (442)
+-.++..++
T Consensus 96 ~~~~~d~vi 104 (274)
T 1ja9_A 96 HFGGLDFVM 104 (274)
T ss_dssp HHSCEEEEE
T ss_pred HcCCCCEEE
Confidence 223455444
No 397
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=36.96 E-value=1.1e+02 Score=28.21 Aligned_cols=90 Identities=18% Similarity=0.144 Sum_probs=50.8
Q ss_pred cEEEecCh---HHHHHHHHHhhcCCCCeEEEcCCCCcC-hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGA---TAANELLTFILADPGDALLVPTPYYPG-FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~---~~ai~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
-|+++.|+ .+++.++-.+---.-|.|++..|.|.. ..+ +.+.+.++...+.
T Consensus 94 pViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~-------------------------~~l~~~f~~IA~a 148 (344)
T 2hmc_A 94 PVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVI-------------------------AAQKAHFKAILSA 148 (344)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCH-------------------------HHHHHHHHHHHHH
T ss_pred cEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCH-------------------------HHHHHHHHHHHhh
Confidence 37777774 455555533321133889998888864 211 2222222221110
Q ss_pred CCceeEEEEeCCCCCCCcCCCHHHHHHH-HHHHHhcCcEEEEecc
Q 046900 198 DMRVRGVLITNPSNPLGATIQRSVLEEL-LDFATRKNIHLVSDEI 241 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~~~~~~~l~~l-~~~~~~~~~~vi~De~ 241 (442)
.....++++++| .||..++.+.+.+| ++ --|+.=|=|..
T Consensus 149 a~~lPiilYn~P--~tg~~l~~e~~~~L~a~---~pnIvGiKdss 188 (344)
T 2hmc_A 149 APEIPAVIYNSP--YYGFATRADLFFALRAE---HKNLVGFKEFG 188 (344)
T ss_dssp STTSCEEEEEBG--GGTBCCCHHHHHHHHHH---CTTEEEEEECS
T ss_pred CCCCcEEEEecC--ccCCCcCHHHHHHHHhc---CCCEEEEEcCC
Confidence 114567899999 89999998888887 43 23554454433
No 398
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=36.89 E-value=2.1e+02 Score=24.76 Aligned_cols=93 Identities=15% Similarity=0.252 Sum_probs=47.5
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-.. . .++.+ +..|- -|.+.+++.+++..++..
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~-~~~~~--~~~Dl-----~~~~~v~~~~~~~~~~~g 73 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------E-AKYDH--IECDV-----TNPDQVKASIDHIFKEYG 73 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------S-CSSEE--EECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------C-CceEE--EEecC-----CCHHHHHHHHHHHHHHcC
Confidence 3457777665544455667777888777764321111 1 23333 33332 256777777765433323
Q ss_pred ceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
++.++| +|.. .+.+. -.+.++++++.+
T Consensus 74 ~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (264)
T 2dtx_A 74 SISVLV-NNAGIESYGKIESMSMGEWRRIID 103 (264)
T ss_dssp CCCEEE-ECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 455444 4432 22222 245666666554
No 399
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=36.85 E-value=38 Score=32.75 Aligned_cols=96 Identities=16% Similarity=0.118 Sum_probs=57.4
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
+....|+|..|+..+...+ +.|.+.|-.|.+-+|....-...+....+++++.-. ++.+.|+
T Consensus 10 l~~~~vlVvGgG~va~~k~-~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~--------~~~~~l~--------- 71 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKA-RLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGP--------FDETLLD--------- 71 (457)
T ss_dssp CBTCEEEEECCSHHHHHHH-HHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESS--------CCGGGGT---------
T ss_pred CCCCEEEEECCCHHHHHHH-HHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECC--------CCccccC---------
Confidence 4456788888888888877 566678888888777654322222111345544311 1223332
Q ss_pred CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE-EEecc
Q 046900 198 DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL-VSDEI 241 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v-i~De~ 241 (442)
+.. +++..|++|. .-..+++.|+++++++ ++|+.
T Consensus 72 --~~~-lVi~at~~~~-------~n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 72 --SCW-LAIAATDDDT-------VNQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp --TCS-EEEECCSCHH-------HHHHHHHHHHHTTCEEEETTCT
T ss_pred --Ccc-EEEEcCCCHH-------HHHHHHHHHHHcCCEEEECCCc
Confidence 223 4555666651 2457888999999987 57776
No 400
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=36.60 E-value=2e+02 Score=24.56 Aligned_cols=103 Identities=15% Similarity=0.117 Sum_probs=51.3
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHh---hhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-........ ...+.++..+..|-.. -|.+.+++.+++..++
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT---CTSENCQQLAQRIAVN 89 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTT---CCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEeccc---CCHHHHHHHHHHHHHh
Confidence 346666655443345567777889888776543222222211 1122233344433211 2567777777665544
Q ss_pred CCceeEEEEeCCC--CCCC--cCCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS--NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~--NPtG--~~~~~~~l~~l~~ 227 (442)
..+...++ +|.. .+.+ .-.+.+++++..+
T Consensus 90 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 122 (252)
T 3f1l_A 90 YPRLDGVL-HNAGLLGDVCPMSEQNPQVWQDVMQ 122 (252)
T ss_dssp CSCCSEEE-ECCCCCCCCSCTTTCCHHHHHHHHH
T ss_pred CCCCCEEE-ECCccCCCCCCcccCCHHHHHHHHh
Confidence 44566544 4442 2222 2346666666655
No 401
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=36.55 E-value=1.7e+02 Score=25.07 Aligned_cols=101 Identities=10% Similarity=0.036 Sum_probs=49.4
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-...... +.. .|.++..+..|- -|.+.+++.+++..+.
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 88 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-KGFQVTGSVCDA-----SLRPEREKLMQTVSSM 88 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeeEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 3466665544433455677777887777654322111111 221 355565665543 2567777777654322
Q ss_pred C-CceeEEEEeCCCCCCC--cCCCHHHHHHHHH
Q 046900 198 D-MRVRGVLITNPSNPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 198 ~-~~~~~v~l~~P~NPtG--~~~~~~~l~~l~~ 227 (442)
- .++..+|-+.-..+.+ .-.+.+++++..+
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (266)
T 1xq1_A 89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHIS 121 (266)
T ss_dssp HTTCCSEEEEECCC------CCCCHHHHHHHHH
T ss_pred hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 1 3556555543222222 1245566655544
No 402
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=36.46 E-value=2e+02 Score=25.98 Aligned_cols=109 Identities=13% Similarity=0.168 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecC---hHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAG---ATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G---~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
.+=|.++.+...+.-+. .--|+++.| ..+++.++-.+---.-|.|++..|.|....+
T Consensus 76 ~~Er~~v~~~~v~~~~g-----rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~--------------- 135 (315)
T 3na8_A 76 DPEWDEVVDFTLKTVAH-----RVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNE--------------- 135 (315)
T ss_dssp HHHHHHHHHHHHHHHTT-----SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCH---------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH---------------
Confidence 34455555555443221 123777666 4455555533332233889999998864221
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
+.+.+.++...+.. ...++++++|. .||..++.+.+.+|+. +--|+.=|=|.
T Consensus 136 ----------~~l~~~f~~va~a~-~lPiilYn~P~-~tg~~l~~~~~~~L~a--~~pnIvgiKds 187 (315)
T 3na8_A 136 ----------AEVFQHYRAVGEAI-GVPVMLYNNPG-TSGIDMSVELILRIVR--EVDNVTMVKES 187 (315)
T ss_dssp ----------HHHHHHHHHHHHHC-SSCEEEEECHH-HHSCCCCHHHHHHHHH--HSTTEEEEEEC
T ss_pred ----------HHHHHHHHHHHHhC-CCcEEEEeCcc-hhCcCCCHHHHHHHHh--cCCCEEEEECC
Confidence 12222222111111 34577888776 3899999887777732 12255445544
No 403
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=36.29 E-value=99 Score=24.82 Aligned_cols=56 Identities=16% Similarity=0.193 Sum_probs=38.0
Q ss_pred HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcC
Q 046900 161 LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKN 233 (442)
Q Consensus 161 ~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~ 233 (442)
++ ..|.+++....+ .+++++.+++.+. ++.+|.++.-.. ...+.+.++++.+++.+
T Consensus 42 l~-~~G~eVi~lG~~------~p~e~lv~aa~~~-----~~diV~lS~~~~-----~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 42 LR-DAGFEVVYTGLR------QTPEQVAMAAVQE-----DVDVIGVSILNG-----AHLHLMKRLMAKLRELG 97 (161)
T ss_dssp HH-HTTCEEECCCSB------CCHHHHHHHHHHT-----TCSEEEEEESSS-----CHHHHHHHHHHHHHHTT
T ss_pred HH-HCCCEEEECCCC------CCHHHHHHHHHhc-----CCCEEEEEeech-----hhHHHHHHHHHHHHhcC
Confidence 44 389998876543 5788888887764 677777764433 23566888888777653
No 404
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=36.29 E-value=1.7e+02 Score=25.27 Aligned_cols=99 Identities=13% Similarity=0.123 Sum_probs=51.2
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEc-CCCCcChH---HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVP-TPYYPGFD---RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.++||.|+...=..+.+.|.+.|..|++. ...-.... ..+. ..+.++..+..|- -|.+.+++.+++..+.
T Consensus 28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIV-ANGGNGRLLSFDV-----ANREQCREVLEHEIAQ 101 (267)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-hcCCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 46666555443345667788889887553 22211111 1222 2455666666553 2567777777655433
Q ss_pred CCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
..+...+ ++|.. ...+. -.+.+++++..+
T Consensus 102 ~g~id~l-i~nAg~~~~~~~~~~~~~~~~~~~~ 133 (267)
T 4iiu_A 102 HGAWYGV-VSNAGIARDAAFPALSNDDWDAVIH 133 (267)
T ss_dssp HCCCSEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hCCccEE-EECCCCCCCCccccCCHHHHHHHHH
Confidence 3355544 44442 22221 346666666655
No 405
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=36.29 E-value=2e+02 Score=24.49 Aligned_cols=101 Identities=10% Similarity=0.083 Sum_probs=49.8
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCC-CCcChH---HhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTP-YYPGFD---RDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p-~y~~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
..|+||.|+...=..+...|.+.|..|++..- .-.... ..+.. .+.++..+..|- -|.+.+++.+++..+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 81 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-VGGEAIAVKGDV-----TVESDVINLVQSAIK 81 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh-cCCceEEEECCC-----CCHHHHHHHHHHHHH
Confidence 34666655444334556677778877776543 211111 11221 366666666553 256777777765433
Q ss_pred cCCceeEEEEeCCCCCCC--cCCCHHHHHHHHH
Q 046900 197 KDMRVRGVLITNPSNPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG--~~~~~~~l~~l~~ 227 (442)
...++..+|.+--..+.+ .-.+.+++++..+
T Consensus 82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 1gee_A 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVID 114 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 223455544432222222 1245555555444
No 406
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=36.19 E-value=2.4e+02 Score=25.37 Aligned_cols=95 Identities=15% Similarity=0.267 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCCCccCCCcEEEecC---hHHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEecCC
Q 046900 101 RQAMASFMEQIRGGRAKFDLNRIVVTAG---ATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS 176 (442)
Q Consensus 101 r~~ia~~l~~~~~~~~~~~~~~i~~t~G---~~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~ 176 (442)
|.++.+...+.-+..++ |+++.| ..+++.++-.+---.+ |.|++..|.|..
T Consensus 62 r~~v~~~~~~~~~grvp-----ViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~-------------------- 116 (311)
T 3h5d_A 62 ELELFAAVQKVVNGRVP-----LIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNK-------------------- 116 (311)
T ss_dssp HHHHHHHHHHHSCSSSC-----EEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSC--------------------
T ss_pred HHHHHHHHHHHhCCCCc-----EEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCC--------------------
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHH
Q 046900 177 SNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLD 227 (442)
Q Consensus 177 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~ 227 (442)
++.+.+.+.++...+.. ...++++++|.. ||..++.+.+.+|++
T Consensus 117 -----~s~~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~ 160 (311)
T 3h5d_A 117 -----PSQEGMYQHFKAIADAS-DLPIIIYNIPGR-VVVELTPETMLRLAD 160 (311)
T ss_dssp -----CCHHHHHHHHHHHHHSC-SSCEEEEECHHH-HSSCCCHHHHHHHHT
T ss_pred -----CCHHHHHHHHHHHHHhC-CCCEEEEecccc-cCCCCCHHHHHHHhc
No 407
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=36.13 E-value=1.3e+02 Score=26.19 Aligned_cols=82 Identities=12% Similarity=0.104 Sum_probs=42.7
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
...++||.|+...=..+...|.+.|..|++..-.-..... .+.. .|.++..+..|- -|.+.+++.+++..+
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT-YGVHSKAYKCNI-----SDPKSVEETISQQEK 107 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHH-HCSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcceEEEeec-----CCHHHHHHHHHHHHH
Confidence 3456676654443344556676778777765432222222 2221 355666666553 256777777765433
Q ss_pred cCCceeEEEEe
Q 046900 197 KDMRVRGVLIT 207 (442)
Q Consensus 197 ~~~~~~~v~l~ 207 (442)
...++..++.+
T Consensus 108 ~~g~id~li~~ 118 (279)
T 3ctm_A 108 DFGTIDVFVAN 118 (279)
T ss_dssp HHSCCSEEEEC
T ss_pred HhCCCCEEEEC
Confidence 22345655443
No 408
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=35.36 E-value=2.2e+02 Score=24.76 Aligned_cols=113 Identities=17% Similarity=0.149 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCC
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS 177 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~ 177 (442)
..|++.|.-+. ..+|.+..|+|=. ..+...| .+..|...|+. .|++.+.+. +
T Consensus 55 ~~l~eki~l~~-----------~~gV~v~~GGTl~-----E~~~~qg--------~~~~yl~~~k~-lGf~~iEiS---~ 106 (251)
T 1qwg_A 55 DVVKEKINYYK-----------DWGIKVYPGGTLF-----EYAYSKG--------KFDEFLNECEK-LGFEAVEIS---D 106 (251)
T ss_dssp HHHHHHHHHHH-----------TTTCEEEECHHHH-----HHHHHTT--------CHHHHHHHHHH-HTCCEEEEC---C
T ss_pred HHHHHHHHHHH-----------HcCCeEECCcHHH-----HHHHHcC--------cHHHHHHHHHH-cCCCEEEEC---C
Confidence 34666666543 3458899998722 2222233 47778888995 999999987 4
Q ss_pred CCCcCCHHHHHHHHHHHHhcCCceeEEEEeCC--CCC-CCcCCCHHHHHHHHHHHHhcCcEEEEeccC
Q 046900 178 NNFQITPQALEAAYKEAESKDMRVRGVLITNP--SNP-LGATIQRSVLEELLDFATRKNIHLVSDEIY 242 (442)
Q Consensus 178 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P--~NP-tG~~~~~~~l~~l~~~~~~~~~~vi~De~y 242 (442)
+...++.+...+.++...+.|-+ +++.- -+| .+...+.+++.+.++.+-+.|+..|+=|+-
T Consensus 107 G~i~l~~~~~~~~I~~~~~~G~~----v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEar 170 (251)
T 1qwg_A 107 GSSDISLEERNNAIKRAKDNGFM----VLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGR 170 (251)
T ss_dssp SSSCCCHHHHHHHHHHHHHTTCE----EEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCT
T ss_pred CcccCCHHHHHHHHHHHHHCCCE----EeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeee
Confidence 45668899999999877655432 23322 233 345678888888888887788777666663
No 409
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=35.13 E-value=1.7e+02 Score=24.55 Aligned_cols=99 Identities=14% Similarity=0.137 Sum_probs=46.9
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEc-CCCCcChHHh---HhhhcCcEEEE-EecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVP-TPYYPGFDRD---LRWRTGIKIVP-IHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~~~~---~~~~~G~~v~~-v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
|+||.|+...=..+.+.|.+.|..|++. .-.-...... +.. .|.++.. +..|- -|.+.+++.+++..+.
T Consensus 4 vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (245)
T 2ph3_A 4 ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARR-RGSPLVAVLGANL-----LEAEAATALVHQAAEV 77 (245)
T ss_dssp EEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHH-TTCSCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCceEEEEeccC-----CCHHHHHHHHHHHHHh
Confidence 5666554433344567777888777764 3221111111 221 3444444 44443 2567777776654332
Q ss_pred CCceeEEEEeCCCCCCC--cCCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPSNPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG--~~~~~~~l~~l~~ 227 (442)
-.++..++.+.-..+.+ ...+.+++++..+
T Consensus 78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (245)
T 2ph3_A 78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLE 109 (245)
T ss_dssp HTCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 23455544432222222 1235555555444
No 410
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=35.01 E-value=1.6e+02 Score=26.45 Aligned_cols=102 Identities=12% Similarity=0.041 Sum_probs=49.5
Q ss_pred CCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---Hhhh------cCcEEEEEecCCCCCCcCCHHHHHH
Q 046900 119 DLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWR------TGIKIVPIHCDSSNNFQITPQALEA 189 (442)
Q Consensus 119 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~------~G~~v~~v~~~~~~~~~~d~~~l~~ 189 (442)
....|+||.|+.-.=..++..|++.|..|.+..-.-...... +... .+++++..++ -|.+.+++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI-------RDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT-------TCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC-------CCHHHHHH
Confidence 456788887633333344566667787766543222221111 1110 2445444332 26778887
Q ss_pred HHHHHHhcCCceeEEEEeCCC-CCCCcCCCHH--------HHHHHHHHHHhcCc
Q 046900 190 AYKEAESKDMRVRGVLITNPS-NPLGATIQRS--------VLEELLDFATRKNI 234 (442)
Q Consensus 190 ~l~~~~~~~~~~~~v~l~~P~-NPtG~~~~~~--------~l~~l~~~~~~~~~ 234 (442)
++. ++.+|+-+... ++....-..+ -...+++.|.+.++
T Consensus 97 ~~~-------~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 97 VMK-------GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp HTT-------TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred Hhc-------CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 765 45566655321 1111111111 13457888887764
No 411
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=34.96 E-value=2.2e+02 Score=24.51 Aligned_cols=80 Identities=14% Similarity=0.140 Sum_probs=40.1
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCc--EEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGI--KIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~--~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-......... .+. ++..+..|- -|.+.+++.+++..+..
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNN-IGSPDVISFVHCDV-----TKDEDVRNLVDTTIAKH 90 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHH-hCCCCceEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 3577776654444455677777887777654321111122221 211 344454443 25677777776543322
Q ss_pred CceeEEEE
Q 046900 199 MRVRGVLI 206 (442)
Q Consensus 199 ~~~~~v~l 206 (442)
.++..+|-
T Consensus 91 ~~id~li~ 98 (278)
T 2bgk_A 91 GKLDIMFG 98 (278)
T ss_dssp SCCCEEEE
T ss_pred CCCCEEEE
Confidence 34555443
No 412
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=34.85 E-value=30 Score=33.32 Aligned_cols=28 Identities=29% Similarity=0.665 Sum_probs=24.6
Q ss_pred CCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 211 NPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 211 NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
+|.|..|+.+++++|++.|+++++-||-
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 5678899999999999999999987764
No 413
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=34.44 E-value=1.2e+02 Score=26.47 Aligned_cols=55 Identities=16% Similarity=0.277 Sum_probs=36.0
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC--HHHHHHHHHHHHhcCcEEEEecc
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ--RSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~--~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
.++.+++++.+....+.-+.. +-+ ||-+|..++ .+-++.+.+.++++|+ +++|.-
T Consensus 79 ~~s~~ei~~~l~~al~~vP~a--~Gv---nNHmGS~~T~~~~~m~~vm~~l~~~gL-~fvDS~ 135 (245)
T 2nly_A 79 NLSVGEVKSRVRKAFDDIPYA--VGL---NNHMGSKIVENEKIMRAILEVVKEKNA-FIIDSG 135 (245)
T ss_dssp TCCHHHHHHHHHHHHHHSTTC--CEE---EEEECTTGGGCHHHHHHHHHHHHHTTC-EEEECC
T ss_pred CCCHHHHHHHHHHHHHHCCCc--EEE---ecccccchhcCHHHHHHHHHHHHHCCC-EEEcCC
Confidence 356788888887665433332 222 355777664 5569999999999985 555544
No 414
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=34.43 E-value=1.5e+02 Score=27.14 Aligned_cols=95 Identities=19% Similarity=0.275 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCCCccCCCcEEEecCh---HHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCC
Q 046900 101 RQAMASFMEQIRGGRAKFDLNRIVVTAGA---TAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSS 177 (442)
Q Consensus 101 r~~ia~~l~~~~~~~~~~~~~~i~~t~G~---~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~ 177 (442)
|..+.+...+.-+..++ |+++.|+ .+++.++-.+---.-|.|++..|.|....+.--.
T Consensus 86 r~~vi~~~ve~~~grvp-----ViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~-------------- 146 (343)
T 2v9d_A 86 RKAIARFAIDHVDRRVP-----VLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLI-------------- 146 (343)
T ss_dssp HHHHHHHHHHHHTTSSC-----EEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHH--------------
T ss_pred HHHHHHHHHHHhCCCCc-----EEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH--------------
Q ss_pred CCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHH-H
Q 046900 178 NNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELL-D 227 (442)
Q Consensus 178 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~-~ 227 (442)
+.+++..+.. ...++++++|. .||..++.+.+.+|+ +
T Consensus 147 -------~~f~~VA~a~-----~lPiilYn~P~-~tg~~l~~e~~~~La~~ 184 (343)
T 2v9d_A 147 -------RYFEQVADSV-----TLPVMLYNFPA-LTGQDLTPALVKTLADS 184 (343)
T ss_dssp -------HHHHHHHHTC-----SSCEEEEECHH-HHSSCCCHHHHHHHHHH
T ss_pred -------HHHHHHHHhc-----CCCEEEEeCch-hcCcCCCHHHHHHHHHh
No 415
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=34.39 E-value=2e+02 Score=23.85 Aligned_cols=94 Identities=12% Similarity=0.038 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCccCCCcEEE-ecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecC
Q 046900 97 LKSFRQAMASFMEQIRGGRAKFDLNRIVV-TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCD 175 (442)
Q Consensus 97 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~-t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~ 175 (442)
++.|++.+.+...+ ++ . ++-+ ..+-.+++..+-. + +.|..|++..-+ ....++...+..|+.++.+
T Consensus 13 y~~l~~~~~~i~~e-~~------~-~i~i~~~~l~~~v~~a~~-~-~~~~dVIISRGg---ta~~lr~~~~iPVV~I~~s 79 (196)
T 2q5c_A 13 NENLLNLFPKLALE-KN------F-IPITKTASLTRASKIAFG-L-QDEVDAIISRGA---TSDYIKKSVSIPSISIKVT 79 (196)
T ss_dssp CHHHHHHHHHHHHH-HT------C-EEEEEECCHHHHHHHHHH-H-TTTCSEEEEEHH---HHHHHHTTCSSCEEEECCC
T ss_pred cHHHHHHHHHHHhh-hC------C-ceEEEECCHHHHHHHHHH-h-cCCCeEEEECCh---HHHHHHHhCCCCEEEEcCC
Confidence 35666655444442 22 1 3433 3445567766644 4 666557766532 2233333467888888854
Q ss_pred CCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCC
Q 046900 176 SSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPL 213 (442)
Q Consensus 176 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPt 213 (442)
.-++-+++.+.+..+. +.-++..++-+.
T Consensus 80 --------~~Dil~al~~a~~~~~--kIavvg~~~~~~ 107 (196)
T 2q5c_A 80 --------RFDTMRAVYNAKRFGN--ELALIAYKHSIV 107 (196)
T ss_dssp --------HHHHHHHHHHHGGGCS--EEEEEEESSCSS
T ss_pred --------HhHHHHHHHHHHhhCC--cEEEEeCcchhh
Confidence 3556666766655443 455666555433
No 416
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=33.98 E-value=58 Score=32.47 Aligned_cols=24 Identities=8% Similarity=0.403 Sum_probs=21.4
Q ss_pred CcCCCHHHHHHHHHHHHhcCcEEE
Q 046900 214 GATIQRSVLEELLDFATRKNIHLV 237 (442)
Q Consensus 214 G~~~~~~~l~~l~~~~~~~~~~vi 237 (442)
|..|+.+++++|++.|+++++-||
T Consensus 250 ~~~YT~~di~eiv~yA~~rgI~VI 273 (572)
T 3ozo_A 250 QKVYTKAAIREVVRFGLERGVRVL 273 (572)
T ss_dssp SSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcCHHHHHHHHHHHHHhCCcee
Confidence 568999999999999999998665
No 417
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=33.86 E-value=2.7e+02 Score=25.17 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecCh---HHHHHHHHHhhcCCCCeEEEcCCCCcC--hHHhHhhhcCcEEEEE
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGA---TAANELLTFILADPGDALLVPTPYYPG--FDRDLRWRTGIKIVPI 172 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~---~~ai~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~~G~~v~~v 172 (442)
.+=|.++.+...+.-+. .--|+++.|+ .+++.++-.+---.-|.|++..|.|.. ..
T Consensus 63 ~~Er~~v~~~~~~~~~g-----rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~-------------- 123 (318)
T 3qfe_A 63 REERAQLIATARKAVGP-----DFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKATT-------------- 123 (318)
T ss_dssp HHHHHHHHHHHHHHHCT-----TSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCC--------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCC--------------
Confidence 34455555555443221 2237777664 444444433322133889999997643 11
Q ss_pred ecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 173 HCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
.+.+.+.++...+.. ...++++++|..-+|..++.+.+.+|++-+ -|+.=|=|.
T Consensus 124 -----------~~~l~~~f~~ia~a~-~lPiilYn~P~~t~g~~l~~~~~~~La~~~--pnIvgiKds 177 (318)
T 3qfe_A 124 -----------PPVIKSFFDDVSCQS-PLPVVIYNFPGVCNGIDLDSDMITTIARKN--PNVVGVKLT 177 (318)
T ss_dssp -----------HHHHHHHHHHHHHHC-SSCEEEEECCC----CCCCHHHHHHHHHHC--TTEEEEEES
T ss_pred -----------HHHHHHHHHHHHhhC-CCCEEEEeCCcccCCCCCCHHHHHHHHhhC--CCEEEEEeC
Confidence 112222221111111 456788888877569999988777776511 255445553
No 418
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=33.38 E-value=2.6e+02 Score=24.94 Aligned_cols=107 Identities=20% Similarity=0.273 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCC-CCccCCCcEEEecC---hHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCC
Q 046900 101 RQAMASFMEQIRGG-RAKFDLNRIVVTAG---ATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDS 176 (442)
Q Consensus 101 r~~ia~~l~~~~~~-~~~~~~~~i~~t~G---~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~ 176 (442)
|.++.+...+.-+. +++ |+++.| ..+++.++-.+---.-|.|++..|.|....+.--.
T Consensus 62 r~~v~~~~~~~~~g~rvp-----viaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~------------- 123 (301)
T 3m5v_A 62 HRTCIEIAVETCKGTKVK-----VLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLY------------- 123 (301)
T ss_dssp HHHHHHHHHHHHTTSSCE-----EEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH-------------
T ss_pred HHHHHHHHHHHhCCCCCe-----EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHH-------------
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEecc
Q 046900 177 SNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 177 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
+.+++..+.. ...++++++|. .||..++.+.+.+|++.+. |+.=|=|..
T Consensus 124 --------~~f~~va~a~-----~lPiilYn~P~-~tg~~l~~~~~~~La~~~p--nivgiKdss 172 (301)
T 3m5v_A 124 --------EHYKAIAQSV-----DIPVLLYNVPG-RTGCEISTDTIIKLFRDCE--NIYGVKEAS 172 (301)
T ss_dssp --------HHHHHHHHHC-----SSCEEEEECHH-HHSCCCCHHHHHHHHHHCT--TEEEEEECS
T ss_pred --------HHHHHHHHhC-----CCCEEEEeCch-hhCcCCCHHHHHHHHhcCC--CEEEEEeCC
No 419
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=33.36 E-value=82 Score=27.60 Aligned_cols=102 Identities=14% Similarity=0.168 Sum_probs=51.5
Q ss_pred EEEecC-hHHHHHHHHHhhcCC-CCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 123 IVVTAG-ATAANELLTFILADP-GDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 123 i~~t~G-~~~ai~~~~~~l~~~-gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
|+||.+ +.-+-.++ ..|.+. |..|.+..-.-.... .+. ..+++++..++ -|.+.+.++++ +
T Consensus 3 ilVtGatG~iG~~l~-~~L~~~~g~~V~~~~R~~~~~~-~~~-~~~v~~~~~D~-------~d~~~l~~~~~-------~ 65 (289)
T 3e48_A 3 IMLTGATGHLGTHIT-NQAIANHIDHFHIGVRNVEKVP-DDW-RGKVSVRQLDY-------FNQESMVEAFK-------G 65 (289)
T ss_dssp EEEETTTSHHHHHHH-HHHHHTTCTTEEEEESSGGGSC-GGG-BTTBEEEECCT-------TCHHHHHHHTT-------T
T ss_pred EEEEcCCchHHHHHH-HHHhhCCCCcEEEEECCHHHHH-Hhh-hCCCEEEEcCC-------CCHHHHHHHHh-------C
Confidence 667765 33343444 446554 665554322111111 112 25666665543 26788888775 4
Q ss_pred eeEEEEeCCC-CCCCcCCCHHHHHHHHHHHHhcCc-EEEEeccCC
Q 046900 201 VRGVLITNPS-NPLGATIQRSVLEELLDFATRKNI-HLVSDEIYS 243 (442)
Q Consensus 201 ~~~v~l~~P~-NPtG~~~~~~~l~~l~~~~~~~~~-~vi~De~y~ 243 (442)
+..|+.+... ++.. ......+.+++.|++.++ .+|.=..|+
T Consensus 66 ~d~vi~~a~~~~~~~--~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 66 MDTVVFIPSIIHPSF--KRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp CSEEEECCCCCCSHH--HHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CCEEEEeCCCCccch--hhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 5666655332 2211 122446788888988774 344333343
No 420
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=33.10 E-value=2.1e+02 Score=25.40 Aligned_cols=107 Identities=20% Similarity=0.268 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecC---hHHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEe
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAG---ATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIH 173 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G---~~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~ 173 (442)
.+=|.++.+...+.-+ ..--|+++.| ..+++.++-.+- +-| |.|++..|.|....+. |+
T Consensus 54 ~~Er~~v~~~~~~~~~-----grvpviaGvg~~~t~~ai~la~~a~-~~Gadavlv~~P~y~~~~~~-----~l------ 116 (292)
T 3daq_A 54 TDEKELILKTVIDLVD-----KRVPVIAGTGTNDTEKSIQASIQAK-ALGADAIMLITPYYNKTNQR-----GL------ 116 (292)
T ss_dssp HHHHHHHHHHHHHHHT-----TSSCEEEECCCSCHHHHHHHHHHHH-HHTCSEEEEECCCSSCCCHH-----HH------
T ss_pred HHHHHHHHHHHHHHhC-----CCCcEEEeCCcccHHHHHHHHHHHH-HcCCCEEEECCCCCCCCCHH-----HH------
Confidence 3444555555444322 1224777766 444554443322 224 8888888887643211 00
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 174 CDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 174 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
.+.+++..+.. ...++++++|.. ||..++.+.+.+|++ --|+.=|=|.
T Consensus 117 ----------~~~f~~ia~a~-----~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnivgiK~s 164 (292)
T 3daq_A 117 ----------VKHFEAIADAV-----KLPVVLYNVPSR-TNMTIEPETVEILSQ---HPYIVALKDA 164 (292)
T ss_dssp ----------HHHHHHHHHHH-----CSCEEEEECHHH-HSCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred ----------HHHHHHHHHhC-----CCCEEEEecccc-cCCCCCHHHHHHHhc---CCCEEEEEeC
Confidence 11122221111 445778877754 799999888877765 2355555553
No 421
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=33.05 E-value=93 Score=27.24 Aligned_cols=24 Identities=8% Similarity=0.230 Sum_probs=13.9
Q ss_pred CCCHHHHHHHHHHHHhcCcEEEEe
Q 046900 216 TIQRSVLEELLDFATRKNIHLVSD 239 (442)
Q Consensus 216 ~~~~~~l~~l~~~~~~~~~~vi~D 239 (442)
.++.++++++++.|++.|+.+++|
T Consensus 133 ~l~~~~l~~l~~~a~~lGl~~lvE 156 (251)
T 1i4n_A 133 ILTAEQIKEIYEAAEELGMDSLVE 156 (251)
T ss_dssp GSCHHHHHHHHHHHHTTTCEEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEE
Confidence 345555666666666666555554
No 422
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=32.99 E-value=1.5e+02 Score=25.62 Aligned_cols=93 Identities=14% Similarity=0.141 Sum_probs=44.7
Q ss_pred EEEecChHHHHHHHHHhhcCC--CCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 123 IVVTAGATAANELLTFILADP--GDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~--gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
|+||.|+...=..+...|.+. |..|.+..-.-..... +. ..+++++..++ -|.+.+.++++ +
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~-~~~~~~~~~D~-------~d~~~~~~~~~-------~ 65 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LA-AQGITVRQADY-------GDEAALTSALQ-------G 65 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HH-HTTCEEEECCT-------TCHHHHHHHTT-------T
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hh-cCCCeEEEcCC-------CCHHHHHHHHh-------C
Confidence 566665332223444566665 7655543322122222 22 24666555433 25678887765 4
Q ss_pred eeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCc
Q 046900 201 VRGVLITNPSNPLGATIQRSVLEELLDFATRKNI 234 (442)
Q Consensus 201 ~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~ 234 (442)
...|+.+...++.. .....+.+++.|++.++
T Consensus 66 ~d~vi~~a~~~~~~---~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 66 VEKLLLISSSEVGQ---RAPQHRNVINAAKAAGV 96 (286)
T ss_dssp CSEEEECC-----------CHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCCchH---HHHHHHHHHHHHHHcCC
Confidence 45666543322211 12235677888877663
No 423
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=32.92 E-value=2.2e+02 Score=24.53 Aligned_cols=95 Identities=12% Similarity=0.102 Sum_probs=49.8
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-... ...++..+..|- -|.+.+++.+++..++..
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 95 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS-------ADPDIHTVAGDI-----SKPETADRIVREGIERFG 95 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC-------SSTTEEEEESCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc-------ccCceEEEEccC-----CCHHHHHHHHHHHHHHCC
Confidence 33466666554433455677888898887654322211 122344454443 257777777765544333
Q ss_pred ceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
++..++ +|.. .+.+ .-.+.+++++..+
T Consensus 96 ~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 125 (260)
T 3un1_A 96 RIDSLV-NNAGVFLAKPFVEMTQEDYDHNLG 125 (260)
T ss_dssp CCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 566544 4432 2222 2346666666655
No 424
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=32.91 E-value=1.5e+02 Score=25.71 Aligned_cols=95 Identities=15% Similarity=0.155 Sum_probs=47.4
Q ss_pred EEEecChHHHHHHHHHhhcCC--CCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 123 IVVTAGATAANELLTFILADP--GDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~--gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
|+||.|+...=..++..|.+. |..|.+..-.-.... .+. ..+++++..++ -|.+.+.++++ +
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~l~-~~~~~~~~~D~-------~d~~~l~~~~~-------~ 66 (287)
T 2jl1_A 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-TLA-DQGVEVRHGDY-------NQPESLQKAFA-------G 66 (287)
T ss_dssp EEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-HHH-HTTCEEEECCT-------TCHHHHHHHTT-------T
T ss_pred EEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-HHh-hcCCeEEEecc-------CCHHHHHHHHh-------c
Confidence 666665332223445666665 755554332212222 222 24666655433 25677887765 4
Q ss_pred eeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCc
Q 046900 201 VRGVLITNPSNPLGATIQRSVLEELLDFATRKNI 234 (442)
Q Consensus 201 ~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~ 234 (442)
+..|+.+...++. ..........+++.|.+.++
T Consensus 67 ~d~vi~~a~~~~~-~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 67 VSKLLFISGPHYD-NTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp CSEEEECCCCCSC-HHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEcCCCCcC-chHHHHHHHHHHHHHHHcCC
Confidence 4566655332221 10012345678888887764
No 425
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=32.89 E-value=1.3e+02 Score=25.64 Aligned_cols=68 Identities=6% Similarity=0.026 Sum_probs=37.6
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
...|+||.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..|- -|.+.+++.+++
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~ 81 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA-LKDNYTIEVCNL-----ANKEECSNLISK 81 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HCSSEEEEECCT-----TSHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-hccCccEEEcCC-----CCHHHHHHHHHh
Confidence 34566666655443445677778898888765433333333332 333444444443 256777777764
No 426
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=32.88 E-value=1.5e+02 Score=25.36 Aligned_cols=98 Identities=12% Similarity=0.113 Sum_probs=49.3
Q ss_pred EEEecChHHHH-HHHHHhhcCCC--CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 123 IVVTAGATAAN-ELLTFILADPG--DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 123 i~~t~G~~~ai-~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
++||.| +.+| ..+.+.|.+.| -.|++..-.-........ ..|.++..+..|- -|.+.+++.+++..++..
T Consensus 5 ~lVTGa-s~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 5 ILVTGV-SRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKE-KYGDRFFYVVGDI-----TEDSVLKQLVNAAVKGHG 77 (254)
T ss_dssp EEECST-TSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHH-HHGGGEEEEESCT-----TSHHHHHHHHHHHHHHHS
T ss_pred EEEECC-CchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHH-HhCCceEEEECCC-----CCHHHHHHHHHHHHHhcC
Confidence 455544 4444 34455665553 566554333222333333 2455666666653 256777777766544334
Q ss_pred ceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
+...++-+--. .+.+. -.+.+++++..+
T Consensus 78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 3kzv_A 78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYD 108 (254)
T ss_dssp CCCEEEEECCCCCCCTTTTSCCHHHHHHHHH
T ss_pred CccEEEECCcccCCCCCcccCCHHHHHHHHH
Confidence 56654443222 23232 346666666655
No 427
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=32.81 E-value=1.9e+02 Score=25.78 Aligned_cols=108 Identities=14% Similarity=0.148 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecC---hHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAG---ATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G---~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
.+=|.++.+...+.-+ ..-.|+++.| ..+++.++-.+---.-|.|++..|.|....+
T Consensus 59 ~~Er~~v~~~~~~~~~-----grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~--------------- 118 (297)
T 3flu_A 59 VEEHTAVIEAVVKHVA-----KRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQ--------------- 118 (297)
T ss_dssp HHHHHHHHHHHHHHHT-----TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH---------------
T ss_pred HHHHHHHHHHHHHHhC-----CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH---------------
Confidence 3445555555544322 1223777766 4444444433322223888888888764321
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
+.+.+.++...+.. ...++++++|.. ||..++.+.+.+|++ --|+.=|=|.
T Consensus 119 ----------~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnivgiKds 169 (297)
T 3flu_A 119 ----------EGIYQHFKTIAEAT-SIPMIIYNVPGR-TVVSMTNDTILRLAE---IPNIVGVKEA 169 (297)
T ss_dssp ----------HHHHHHHHHHHHHC-CSCEEEEECHHH-HSSCCCHHHHHHHTT---STTEEEEEEC
T ss_pred ----------HHHHHHHHHHHHhC-CCCEEEEECCch-hccCCCHHHHHHHHc---CCCEEEEEeC
Confidence 11112111111111 456788887763 899999887766653 2355445543
No 428
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=32.81 E-value=2.4e+02 Score=24.38 Aligned_cols=101 Identities=11% Similarity=0.122 Sum_probs=49.2
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcC--cEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTG--IKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G--~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
..++||.|+...=..+...|.+.|..|++..-.-...... +.. .| .++..+..|- -|.+.+++.+++..
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKS-AGYPGTLIPYRCDL-----SNEEDILSMFSAIR 106 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCSSEEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHh-cCCCceEEEEEecC-----CCHHHHHHHHHHHH
Confidence 3466665544333455667777887777654322111111 221 23 4555665553 35677777776543
Q ss_pred hcCCceeEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 196 SKDMRVRGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
+...++.+||-+....+.+. -.+.+++++..+
T Consensus 107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 140 (279)
T 1xg5_A 107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFN 140 (279)
T ss_dssp HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 32234555444322222222 235555555444
No 429
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=32.72 E-value=1.6e+02 Score=26.48 Aligned_cols=108 Identities=16% Similarity=0.186 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecC---hHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEec
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAG---ATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHC 174 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G---~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~ 174 (442)
.+=|.++.+...+.-+.. --|+++.| ..+++.++-.+---.-|.|++..|.|.....
T Consensus 56 ~~Er~~v~~~~~~~~~gr-----vpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~--------------- 115 (300)
T 3eb2_A 56 TAQREAVVRATIEAAQRR-----VPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKD--------------- 115 (300)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCH---------------
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH---------------
Confidence 344555555554432211 12555554 4556655533322234888888888764211
Q ss_pred CCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 175 DSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 175 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
+.+.+.++...+.. ...++++++|.. ||..++.+.+.+|++ --|+.=|=|.
T Consensus 116 ----------~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKds 166 (300)
T 3eb2_A 116 ----------AQIESYFRAIADAV-EIPVVIYTNPQF-QRSDLTLDVIARLAE---HPRIRYIKDA 166 (300)
T ss_dssp ----------HHHHHHHHHHHHHC-SSCEEEEECTTT-CSSCCCHHHHHHHHT---STTEEEEEEC
T ss_pred ----------HHHHHHHHHHHHHC-CCCEEEEECccc-cCCCCCHHHHHHHHc---CCCEEEEEcC
Confidence 12222222111111 356788888874 899999887777743 3355555554
No 430
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=32.55 E-value=1.4e+02 Score=25.70 Aligned_cols=82 Identities=17% Similarity=0.274 Sum_probs=43.3
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc-C
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK-D 198 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~-~ 198 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-......... ..|.++..+..|- -|.+.+++.+++..++ .
T Consensus 7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 7 VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDS-----SQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCT-----TSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCC-----CCHHHHHHHHHHHHHhcC
Confidence 455655544333455677778888887654322212221111 1366777776654 3577777777654332 2
Q ss_pred CceeEEEEeCC
Q 046900 199 MRVRGVLITNP 209 (442)
Q Consensus 199 ~~~~~v~l~~P 209 (442)
.+... +++|.
T Consensus 82 g~id~-lvnnA 91 (260)
T 2qq5_A 82 GRLDV-LVNNA 91 (260)
T ss_dssp TCCCE-EEECC
T ss_pred CCceE-EEECC
Confidence 34554 44443
No 431
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=32.45 E-value=2.4e+02 Score=24.14 Aligned_cols=100 Identities=21% Similarity=0.283 Sum_probs=50.2
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-...... +. ..|.++..+..|- -|.+.+++.+++..+.
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQ-GEGLSVTGTVCHV-----GKAEDRERLVAMAVNL 88 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCceEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 3466665544433455677778887777654322212111 22 1355666666553 2567777776654333
Q ss_pred CCceeEEEEeCCC-CC-CCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NP-LGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NP-tG~--~~~~~~l~~l~~ 227 (442)
..++..+ ++|.. .+ .+. -.+.+++++..+
T Consensus 89 ~g~iD~l-v~~Ag~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 2zat_A 89 HGGVDIL-VSNAAVNPFFGNIIDATEEVWDKILH 121 (260)
T ss_dssp HSCCCEE-EECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred cCCCCEE-EECCCCCCCCCCcccCCHHHHHHHHH
Confidence 2345544 44432 22 221 245566655554
No 432
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=32.35 E-value=1.5e+02 Score=24.93 Aligned_cols=70 Identities=14% Similarity=0.061 Sum_probs=35.0
Q ss_pred cEEEecChHHHHHHHHHhhcCCC-CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 122 RIVVTAGATAANELLTFILADPG-DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
.|+||.|+...=..+.+.|...| ..|.+..-.-..... .. ..+++++. .|- -|.+.++++++ .
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-~~-~~~~~~~~--~Dl-----~d~~~~~~~~~-------~ 88 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-PY-PTNSQIIM--GDV-----LNHAALKQAMQ-------G 88 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-SC-CTTEEEEE--CCT-----TCHHHHHHHHT-------T
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-cc-cCCcEEEE--ecC-----CCHHHHHHHhc-------C
Confidence 47777654433345567777888 456553321111111 11 12444433 332 26788888875 4
Q ss_pred eeEEEEe
Q 046900 201 VRGVLIT 207 (442)
Q Consensus 201 ~~~v~l~ 207 (442)
..+||.+
T Consensus 89 ~D~vv~~ 95 (236)
T 3qvo_A 89 QDIVYAN 95 (236)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 4555544
No 433
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=32.31 E-value=1.6e+02 Score=25.54 Aligned_cols=82 Identities=18% Similarity=0.054 Sum_probs=40.7
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCC-CCcChHHhHhh--hc-CcEEEEEecCCCCCCcCCH----HHHHHHHHH
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTP-YYPGFDRDLRW--RT-GIKIVPIHCDSSNNFQITP----QALEAAYKE 193 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p-~y~~~~~~~~~--~~-G~~v~~v~~~~~~~~~~d~----~~l~~~l~~ 193 (442)
.++||.|+...=..+.+.|.+.|..|++..- .-......... .. |.++..+..|-. |. +.+++.+++
T Consensus 13 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 13 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS-----LSSSLLDCCEDIIDC 87 (276)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS-----SSTTHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCC-----CccccHHHHHHHHHH
Confidence 4666655443334556777788887776543 21111121111 01 556666665532 34 666666654
Q ss_pred HHhcCCceeEEEEeCC
Q 046900 194 AESKDMRVRGVLITNP 209 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P 209 (442)
..+...++.+ +++|.
T Consensus 88 ~~~~~g~id~-lv~nA 102 (276)
T 1mxh_A 88 SFRAFGRCDV-LVNNA 102 (276)
T ss_dssp HHHHHSCCCE-EEECC
T ss_pred HHHhcCCCCE-EEECC
Confidence 4332234554 44444
No 434
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=32.00 E-value=2.4e+02 Score=24.07 Aligned_cols=101 Identities=16% Similarity=0.139 Sum_probs=51.8
Q ss_pred cEEEecChHHHHHHHHHhhcC---CCCeEEEcCCCCcChHHhHhh--h--cCcEEEEEecCCCCCCcCCHHHHHHHHHHH
Q 046900 122 RIVVTAGATAANELLTFILAD---PGDALLVPTPYYPGFDRDLRW--R--TGIKIVPIHCDSSNNFQITPQALEAAYKEA 194 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~--~--~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~ 194 (442)
.++||.|+...=..+.+.|.+ .|..|++..-.-......... . .|.++..+..|- -|.+.+++.+++.
T Consensus 8 ~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 82 (259)
T 1oaa_A 8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADL-----GTEAGVQRLLSAV 82 (259)
T ss_dssp EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCT-----TSHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCC-----CCHHHHHHHHHHH
Confidence 466665544433445667776 788887754332222222211 0 166777777654 3578888887765
Q ss_pred Hh--cCCcee-EEEEeCCCC--CC-CcC---CCHHHHHHHHH
Q 046900 195 ES--KDMRVR-GVLITNPSN--PL-GAT---IQRSVLEELLD 227 (442)
Q Consensus 195 ~~--~~~~~~-~v~l~~P~N--Pt-G~~---~~~~~l~~l~~ 227 (442)
.+ ...+.. .++++|..- +. +.. .+.+++++..+
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~ 124 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHH
T ss_pred HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHH
Confidence 43 112232 245555432 21 111 45666666655
No 435
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=31.82 E-value=1.6e+02 Score=24.90 Aligned_cols=80 Identities=19% Similarity=0.325 Sum_probs=42.6
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEc-CCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVP-TPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
..++||.|+...=..+.+.|.+.|..|++. ...-..... .+. ..|.++..+..|- -|.+.+++.+++..+
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFK-AAGINVVVAKGDV-----KNPEDVENMVKTAMD 79 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHH-HTTCCEEEEESCT-----TSHHHHHHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHH-hcCCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 346666654443345566777788777765 332222222 222 1465666666553 256777777765433
Q ss_pred cCCceeEEEE
Q 046900 197 KDMRVRGVLI 206 (442)
Q Consensus 197 ~~~~~~~v~l 206 (442)
...++..++-
T Consensus 80 ~~~~~d~vi~ 89 (247)
T 2hq1_A 80 AFGRIDILVN 89 (247)
T ss_dssp HHSCCCEEEE
T ss_pred hcCCCCEEEE
Confidence 3234555443
No 436
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=31.61 E-value=2e+02 Score=24.54 Aligned_cols=102 Identities=11% Similarity=0.090 Sum_probs=47.2
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhh--hcC-------cEEEEEecCCCCCCcCCHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW--RTG-------IKIVPIHCDSSNNFQITPQALEAA 190 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~--~~G-------~~v~~v~~~~~~~~~~d~~~l~~~ 190 (442)
...++||.|+...=..+...|.+.|..|++..-.-......... ..| .++..+..|- -|.+.+++.
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~ 81 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADV-----SEARAARCL 81 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCT-----TSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecC-----CCHHHHHHH
Confidence 34567776554444455667777887777654322222221111 012 2334444432 256777777
Q ss_pred HHHHHhcCCce-eEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 191 YKEAESKDMRV-RGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 191 l~~~~~~~~~~-~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
++...+...+. .++ +++.. .+.+. -.+.+++++..+
T Consensus 82 ~~~~~~~~g~i~d~v-i~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (264)
T 2pd6_A 82 LEQVQACFSRPPSVV-VSCAGITQDEFLLHMSEDDWDKVIA 121 (264)
T ss_dssp HHHHHHHHSSCCSEE-EECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCeEE-EECCCcCCCcchhhCCHHHHHHHHh
Confidence 76543322233 544 44432 22221 235555555544
No 437
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=31.40 E-value=29 Score=33.32 Aligned_cols=28 Identities=29% Similarity=0.621 Sum_probs=24.4
Q ss_pred CCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 211 NPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 211 NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
+|.|..|+.+++++|++.|+++++-||-
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 4567899999999999999999987764
No 438
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=31.16 E-value=2.2e+02 Score=24.54 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=41.9
Q ss_pred CcEEEecC-hHHHH-HHHHHhhcCCCCeEEEcCCCCcC-hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 121 NRIVVTAG-ATAAN-ELLTFILADPGDALLVPTPYYPG-FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 121 ~~i~~t~G-~~~ai-~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
..++||.| ++.+| ..+.+.|.+.|..|++..-.-.. ...... ..+.++..+..|- -|.+.+++.+++..++
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-RLPAKAPLLELDV-----QNEEHLASLAGRVTEA 81 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-TSSSCCCEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH-hcCCCceEEEccC-----CCHHHHHHHHHHHHHH
Confidence 34667665 13333 44556777788877765433221 122222 2444444555443 2567777777655433
Q ss_pred CC---ceeEEEEeCC
Q 046900 198 DM---RVRGVLITNP 209 (442)
Q Consensus 198 ~~---~~~~v~l~~P 209 (442)
.. +... +++|.
T Consensus 82 ~g~~~~iD~-lv~nA 95 (269)
T 2h7i_A 82 IGAGNKLDG-VVHSI 95 (269)
T ss_dssp HCTTCCEEE-EEECC
T ss_pred hCCCCCceE-EEECC
Confidence 22 4554 44444
No 439
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=30.98 E-value=1.6e+02 Score=26.39 Aligned_cols=55 Identities=9% Similarity=0.110 Sum_probs=32.3
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc---CcEEEE
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK---NIHLVS 238 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~---~~~vi~ 238 (442)
.+|.+.+++.++...+. .+..++++ -++=-+..++.+|++++++.+.+. ++.||.
T Consensus 32 ~iD~~~l~~lv~~li~~--Gv~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 32 SLDTATAARLANHLVDQ--GCDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp CBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CcCHHHHHHHHHHHHHc--CCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 57878877777655443 33444443 233233457777877777776553 455554
No 440
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=30.76 E-value=2.7e+02 Score=24.22 Aligned_cols=99 Identities=10% Similarity=0.138 Sum_probs=50.2
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcC-h---HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPG-F---DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~-~---~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-.. . ...+. ..|.++..+..|- -|.+.+++.+.+..+.
T Consensus 31 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 31 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK-KNGSDAACVKANV-----GVVEDIVRMFEEAVKI 104 (283)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-HhCCCeEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 45565554433345667777888877765322211 1 11223 2466666666553 2567777776654332
Q ss_pred CCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
-.+... +++|.. ...+. -.+.+++++..+
T Consensus 105 ~g~iD~-lv~~Ag~~~~~~~~~~~~~~~~~~~~ 136 (283)
T 1g0o_A 105 FGKLDI-VCSNSGVVSFGHVKDVTPEEFDRVFT 136 (283)
T ss_dssp HSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCE-EEECCCcCCCCCcccCCHHHHHHHHH
Confidence 234554 444442 22221 235666665554
No 441
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=30.72 E-value=60 Score=29.07 Aligned_cols=76 Identities=9% Similarity=0.121 Sum_probs=45.2
Q ss_pred CCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHH
Q 046900 151 TPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFAT 230 (442)
Q Consensus 151 ~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~ 230 (442)
.|.|..+.+.... ...+++-+-...+ .-.+.++++++. ..+.+++..+ | ++.++.+++.+.|+
T Consensus 50 ~~vy~sl~el~~~-~~~D~viI~tP~~----~~~~~~~ea~~~------Gi~~iVi~t~----G--~~~~~~~~l~~~A~ 112 (288)
T 2nu8_A 50 LPVFNTVREAVAA-TGATASVIYVPAP----FCKDSILEAIDA------GIKLIITITE----G--IPTLDMLTVKVKLD 112 (288)
T ss_dssp EEEESSHHHHHHH-HCCCEEEECCCGG----GHHHHHHHHHHT------TCSEEEECCC----C--CCHHHHHHHHHHHH
T ss_pred eeccCCHHHHhhc-CCCCEEEEecCHH----HHHHHHHHHHHC------CCCEEEEECC----C--CCHHHHHHHHHHHH
Confidence 3456666665542 3455554433221 235666666653 5565554322 4 35677889999999
Q ss_pred hcCcEEEEeccCC
Q 046900 231 RKNIHLVSDEIYS 243 (442)
Q Consensus 231 ~~~~~vi~De~y~ 243 (442)
++++.++-..+.+
T Consensus 113 ~~gv~liGPNc~G 125 (288)
T 2nu8_A 113 EAGVRMIGPNTPG 125 (288)
T ss_dssp HHTCEEECSSCCE
T ss_pred HcCCEEEecCCcc
Confidence 9999887676654
No 442
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=30.67 E-value=1.1e+02 Score=25.12 Aligned_cols=60 Identities=10% Similarity=-0.130 Sum_probs=33.5
Q ss_pred hHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 129 ATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 129 ~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
..+.+..++..+.+.-|.|+++.|.......... ...++.+-+++..+. .+ +.+...++.
T Consensus 61 ~~~~l~~~l~~l~~~yD~viiD~~~~~~~~~~~~-l~~ad~viiv~~~~~---~~-~~~~~~~~~ 120 (206)
T 4dzz_A 61 ASEKDVYGIRKDLADYDFAIVDGAGSLSVITSAA-VMVSDLVIIPVTPSP---LD-FSAAGSVVT 120 (206)
T ss_dssp CSHHHHHTHHHHTTTSSEEEEECCSSSSHHHHHH-HHHCSEEEEEECSCT---TT-HHHHHHHHH
T ss_pred CcHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHH-HHHCCEEEEEecCCH---HH-HHHHHHHHH
Confidence 3366666667776677999999987654332211 123344555555432 34 455554443
No 443
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=30.60 E-value=2.1e+02 Score=24.36 Aligned_cols=80 Identities=11% Similarity=-0.029 Sum_probs=40.1
Q ss_pred cEEEecChHHHHHHHHHhhcC-CCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGATAANELLTFILAD-PGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~-~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.|+||.|+...=..+.+.|.+ .|..|++..-.-...... +.. .|.++..+..|- -|.+.+++.+++..+.
T Consensus 6 ~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-EGLSPRFHQLDI-----DDLQSIRALRDFLRKE 79 (276)
T ss_dssp EEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-TTCCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh-cCCeeEEEECCC-----CCHHHHHHHHHHHHHh
Confidence 466665544333455667777 787777654322211111 221 344455555443 2567777777654333
Q ss_pred CCceeEEEEe
Q 046900 198 DMRVRGVLIT 207 (442)
Q Consensus 198 ~~~~~~v~l~ 207 (442)
..++..||-+
T Consensus 80 ~g~id~li~~ 89 (276)
T 1wma_A 80 YGGLDVLVNN 89 (276)
T ss_dssp HSSEEEEEEC
T ss_pred cCCCCEEEEC
Confidence 2355554433
No 444
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=30.35 E-value=2.7e+02 Score=24.16 Aligned_cols=101 Identities=16% Similarity=0.135 Sum_probs=51.8
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEA 194 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~ 194 (442)
++...++||.|+...=..+.+.|.+.|..|++..-. ...... +. ..|.++..+..|- -|.+.+++..+..
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~-~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 101 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIA-DGGGSAEAVVADL-----ADLEGAANVAEEL 101 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHH-TTTCEEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHH-hcCCcEEEEEecC-----CCHHHHHHHHHHH
Confidence 334456666665544445667788889888776522 222222 22 2466777777654 2556666553322
Q ss_pred HhcCCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 195 ESKDMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 195 ~~~~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
.. ..+... +++|.. .+.+. -.+.+++++..+
T Consensus 102 ~~-~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (273)
T 3uf0_A 102 AA-TRRVDV-LVNNAGIIARAPAEEVSLGRWREVLT 135 (273)
T ss_dssp HH-HSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred Hh-cCCCcE-EEECCCCCCCCCchhCCHHHHHHHHH
Confidence 11 124554 444442 22121 246666666655
No 445
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=30.06 E-value=1.9e+02 Score=24.77 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=49.9
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHH----hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhc
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDR----DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESK 197 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-..... .+. ..+.++..+..|- -|.+.+++.+++..++
T Consensus 9 ~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 9 HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYK-DVEERLQFVQADV-----TKKEDLHKIVEEAMSH 82 (264)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTG-GGGGGEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH-hcCCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 35555554433345567777888877765222111111 112 1345566666553 2577888777765443
Q ss_pred CCceeEEEEeCCC---CCCC--cCCCHHHHHHHHH
Q 046900 198 DMRVRGVLITNPS---NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 198 ~~~~~~v~l~~P~---NPtG--~~~~~~~l~~l~~ 227 (442)
..++..+ ++|.. .+.+ .-.+.+++++..+
T Consensus 83 ~g~id~l-v~~Ag~~~~~~~~~~~~~~~~~~~~~~ 116 (264)
T 3i4f_A 83 FGKIDFL-INNAGPYVFERKKLVDYEEDEWNEMIQ 116 (264)
T ss_dssp HSCCCEE-ECCCCCCCCSCCCGGGCCHHHHHHHHH
T ss_pred hCCCCEE-EECCcccccCCCccccCCHHHHHHHHH
Confidence 3355544 44433 1111 1245566655554
No 446
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=30.02 E-value=2.6e+02 Score=23.85 Aligned_cols=97 Identities=18% Similarity=0.159 Sum_probs=48.4
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-.. ...... .+ + ..+..|- -|.+.+++.+++..+...+
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~-~~-~-~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEA-IG-G-AFFQVDL-----EDERERVRFVEEAAYALGR 77 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHH-HT-C-EEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHH-hh-C-CEEEeeC-----CCHHHHHHHHHHHHHHcCC
Confidence 346676655444445567777888877765433222 333332 32 2 3344332 2567777777654333234
Q ss_pred eeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 201 VRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 201 ~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
...+ ++|.. .+.+. -.+.+++++..+
T Consensus 78 iD~l-v~~Ag~~~~~~~~~~~~~~~~~~~~ 106 (256)
T 2d1y_A 78 VDVL-VNNAAIAAPGSALTVRLPEWRRVLE 106 (256)
T ss_dssp CCEE-EECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 5544 44432 22222 245566655554
No 447
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=29.77 E-value=2.1e+02 Score=28.02 Aligned_cols=103 Identities=19% Similarity=0.280 Sum_probs=55.0
Q ss_pred cCCCcEEEecChHHHHHH-HHHhhcCCCCe-EEEc-CCC----------------CcChHHhHhhhcCcEEEEEecCCCC
Q 046900 118 FDLNRIVVTAGATAANEL-LTFILADPGDA-LLVP-TPY----------------YPGFDRDLRWRTGIKIVPIHCDSSN 178 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~-~~~~l~~~gd~-Vl~~-~p~----------------y~~~~~~~~~~~G~~v~~v~~~~~~ 178 (442)
+.++.+++..|++.+|=. +.+.|.+.|.. |++. .-. -......+. ..|.++..+.+|-
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dv-- 324 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCDL-- 324 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECCT--
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECCC--
Confidence 345555555565555543 45666677754 4443 222 111222334 2688888888764
Q ss_pred CCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCc--CCCHHHHHHHHH
Q 046900 179 NFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 179 ~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~--~~~~~~l~~l~~ 227 (442)
-|.+.+++.+.+.. +..+...||-+--....+. -++.++++++.+
T Consensus 325 ---td~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 325 ---TDAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp ---TSHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHH
Confidence 36788888887654 3335554443322222232 346666666554
No 448
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=29.76 E-value=2.1e+02 Score=25.69 Aligned_cols=54 Identities=15% Similarity=0.092 Sum_probs=32.5
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc---CcEEE
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK---NIHLV 237 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~---~~~vi 237 (442)
.+|.+.+++.++...+. .+..++++ -++=-+..++.+|++++++.+.+. ++.||
T Consensus 33 ~iD~~~l~~lv~~li~~--Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 89 (304)
T 3cpr_A 33 DIDIAAGREVAAYLVDK--GLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVGDRAKLI 89 (304)
T ss_dssp CBCHHHHHHHHHHHHHT--TCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred CcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 58888888877755443 34455543 222233457888888888777643 35554
No 449
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=29.60 E-value=29 Score=24.69 Aligned_cols=22 Identities=14% Similarity=0.179 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhcCcEEEEeccC
Q 046900 221 VLEELLDFATRKNIHLVSDEIY 242 (442)
Q Consensus 221 ~l~~l~~~~~~~~~~vi~De~y 242 (442)
.-++|.++|+++|+.|+.|..-
T Consensus 28 ~A~~I~~~A~e~~VPi~e~~~L 49 (83)
T 3bzy_B 28 KALQIIKLAELYDIPVIEDIPL 49 (83)
T ss_dssp HHHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHHcCCCEEeCHHH
Confidence 3678889999999999999763
No 450
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=29.50 E-value=2.7e+02 Score=23.93 Aligned_cols=98 Identities=15% Similarity=0.125 Sum_probs=50.0
Q ss_pred CCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHh---hh-cCcEEEEEecCCCCCCcCCHHHHHHHHHHHH
Q 046900 120 LNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WR-TGIKIVPIHCDSSNNFQITPQALEAAYKEAE 195 (442)
Q Consensus 120 ~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~-~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~ 195 (442)
...++||.|+...=..+.+.|.+.|..|++..-.-........ .. .+..+..+..|- -|.+.+++.++++
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~- 83 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADL-----GTEQGCQDVIEKY- 83 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT-----TSHHHHHHHHHHC-
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC-----CCHHHHHHHHHhc-
Confidence 3346666655443344567777889888776533222222221 11 145666666553 2567777777653
Q ss_pred hcCCceeEEEEeCCC-CCCC--cCCCHHHHHHHHH
Q 046900 196 SKDMRVRGVLITNPS-NPLG--ATIQRSVLEELLD 227 (442)
Q Consensus 196 ~~~~~~~~v~l~~P~-NPtG--~~~~~~~l~~l~~ 227 (442)
.+... +++|.. ...+ .-.+.+++++..+
T Consensus 84 ---g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 114 (267)
T 3t4x_A 84 ---PKVDI-LINNLGIFEPVEYFDIPDEDWFKLFE 114 (267)
T ss_dssp ---CCCSE-EEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred ---CCCCE-EEECCCCCCCCccccCCHHHHHHHHH
Confidence 24554 444432 2212 1345566655544
No 451
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=28.85 E-value=2.5e+02 Score=23.21 Aligned_cols=107 Identities=9% Similarity=0.030 Sum_probs=52.5
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCC--CeEEEcCCCCcChHHhHhh----hcCcEEEEEecCCCCCCcCCHHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPG--DALLVPTPYYPGFDRDLRW----RTGIKIVPIHCDSSNNFQITPQALEAAY 191 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~----~~G~~v~~v~~~~~~~~~~d~~~l~~~l 191 (442)
+++++|+++.-++.+...+..++..+. ..|+......+........ ..+..+.-+.=+. +-.++++..++..
T Consensus 97 i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~~~~~~~~~~~Pvl~~hG~~--D~~vp~~~~~~~~ 174 (210)
T 4h0c_A 97 IPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAIGNYKGDFKQTPVFISTGNP--DPHVPVSRVQESV 174 (210)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCGGGCCBCCTTCEEEEEEEES--CTTSCHHHHHHHH
T ss_pred CChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhhhhhhhhccCCceEEEecCC--CCccCHHHHHHHH
Confidence 678899888767766665555554443 3444433322211111000 0223333322222 2235566555554
Q ss_pred HHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHH
Q 046900 192 KEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFAT 230 (442)
Q Consensus 192 ~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~ 230 (442)
+..++.+.++....+. . .|..++.++++.+.++..
T Consensus 175 ~~L~~~g~~v~~~~yp--g--~gH~i~~~el~~i~~wL~ 209 (210)
T 4h0c_A 175 TILEDMNAAVSQVVYP--G--RPHTISGDEIQLVNNTIL 209 (210)
T ss_dssp HHHHHTTCEEEEEEEE--T--CCSSCCHHHHHHHHHTTT
T ss_pred HHHHHCCCCeEEEEEC--C--CCCCcCHHHHHHHHHHHc
Confidence 4444445555544443 2 244567888888877653
No 452
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=28.71 E-value=2.5e+02 Score=24.55 Aligned_cols=100 Identities=18% Similarity=0.241 Sum_probs=49.8
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHh---hhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcC
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKD 198 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-........ ...+..+..+..|- -|.+.+++.+++..++.
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 35 IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDV-----GDPDQVAALFAAVRAEF 109 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCC-----CCHHHHHHHHHHHHHHc
Confidence 45555554433344567777888888776533222222221 11222234555443 25677777776554433
Q ss_pred CceeEEEEeCCC-C-CCC--cCCCHHHHHHHHH
Q 046900 199 MRVRGVLITNPS-N-PLG--ATIQRSVLEELLD 227 (442)
Q Consensus 199 ~~~~~v~l~~P~-N-PtG--~~~~~~~l~~l~~ 227 (442)
.+...+ ++|.. . +.+ .-.+.++++++.+
T Consensus 110 g~iD~l-vnnAG~~~~~~~~~~~~~~~~~~~~~ 141 (281)
T 4dry_A 110 ARLDLL-VNNAGSNVPPVPLEEVTFEQWNGIVA 141 (281)
T ss_dssp SCCSEE-EECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEE-EECCCCCCCCCCcccCCHHHHHHHHH
Confidence 355544 44442 2 212 1246666766665
No 453
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=28.60 E-value=3e+02 Score=26.71 Aligned_cols=98 Identities=20% Similarity=0.360 Sum_probs=52.2
Q ss_pred cEEEecChHHHHHHHHHhhcCCCC-eEEEcCCC---CcC---hHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHH
Q 046900 122 RIVVTAGATAANELLTFILADPGD-ALLVPTPY---YPG---FDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEA 194 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd-~Vl~~~p~---y~~---~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~ 194 (442)
.++||.|+...=..+.+.|.+.|. +|++..-. -.. ....+. ..|.++..+.+|- -|.+.+++.+.+.
T Consensus 241 ~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dv-----td~~~v~~~~~~i 314 (496)
T 3mje_A 241 SVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELE-QLGVRVTIAACDA-----ADREALAALLAEL 314 (496)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCT-----TCHHHHHHHHHTC
T ss_pred EEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHH-hcCCeEEEEEccC-----CCHHHHHHHHHHH
Confidence 355555443333445566777785 55553221 112 222334 2688888888775 3678898888765
Q ss_pred HhcCCceeEEEEeCCC-C-CCCc--CCCHHHHHHHHH
Q 046900 195 ESKDMRVRGVLITNPS-N-PLGA--TIQRSVLEELLD 227 (442)
Q Consensus 195 ~~~~~~~~~v~l~~P~-N-PtG~--~~~~~~l~~l~~ 227 (442)
... .+...| ++|.. . ..+. -++.++++++.+
T Consensus 315 ~~~-g~ld~v-Vh~AGv~~~~~~l~~~t~e~~~~vl~ 349 (496)
T 3mje_A 315 PED-APLTAV-FHSAGVAHDDAPVADLTLGQLDALMR 349 (496)
T ss_dssp CTT-SCEEEE-EECCCCCCSCCCTTTCCHHHHHHHHH
T ss_pred HHh-CCCeEE-EECCcccCCCCCcccCCHHHHHHHHH
Confidence 433 345544 44432 2 3332 245566665544
No 454
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=28.60 E-value=2.1e+02 Score=25.48 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=24.1
Q ss_pred ceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 200 RVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 200 ~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
+..++++++|. .||..++.+.+.+|++ --|+.=|=|.
T Consensus 127 ~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnivgiK~s 163 (291)
T 3tak_A 127 ELPLILYNVPG-RTGVDLSNDTAVRLAE---IPNIVGIKDA 163 (291)
T ss_dssp CSCEEEEECHH-HHSCCCCHHHHHHHTT---STTEEEEEEC
T ss_pred CCCEEEEeccc-ccCCCCCHHHHHHHHc---CCCEEEEEeC
Confidence 45577888776 3799999887766653 2355445543
No 455
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=28.04 E-value=2.5e+02 Score=23.12 Aligned_cols=70 Identities=11% Similarity=0.051 Sum_probs=36.6
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..|+||.|+...=..+...|.+.|..|.+..-.-..... . ..++++ +..|- .|.+.++++++ +
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~--~~~~~~--~~~Dl-----~d~~~~~~~~~-------~ 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-E--NEHLKV--KKADV-----SSLDEVCEVCK-------G 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-C--CTTEEE--ECCCT-----TCHHHHHHHHT-------T
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-c--cCceEE--EEecC-----CCHHHHHHHhc-------C
Confidence 357777764433344556777788777765433111110 0 123333 33332 26788888775 4
Q ss_pred eeEEEEe
Q 046900 201 VRGVLIT 207 (442)
Q Consensus 201 ~~~v~l~ 207 (442)
+.+|+.+
T Consensus 68 ~d~vi~~ 74 (227)
T 3dhn_A 68 ADAVISA 74 (227)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 5556554
No 456
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=28.01 E-value=2.7e+02 Score=23.31 Aligned_cols=100 Identities=12% Similarity=0.041 Sum_probs=48.4
Q ss_pred cEEEecChHHHHHHHHHhhcCCC--CeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 122 RIVVTAGATAANELLTFILADPG--DALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
.++||.|+...=..+.+.|.+.| ..|++..-.-......... .+.++..+..|- -|.+.+++.+++..+...
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 78 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-KDSRVHVLPLTV-----TCDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-CCTTEEEEECCT-----TCHHHHHHHHHHHHHHHG
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc-cCCceEEEEeec-----CCHHHHHHHHHHHHHhcC
Confidence 46666655443345667777888 6776654332222222111 144455555543 256777777665432211
Q ss_pred --ceeEEEEeCCCCC-CCc--CCCHHHHHHHHH
Q 046900 200 --RVRGVLITNPSNP-LGA--TIQRSVLEELLD 227 (442)
Q Consensus 200 --~~~~v~l~~P~NP-tG~--~~~~~~l~~l~~ 227 (442)
++..+|.+.-..+ .+. ..+.+++++..+
T Consensus 79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (250)
T 1yo6_A 79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLD 111 (250)
T ss_dssp GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHH
T ss_pred CCCCcEEEECCcccCCCcccccCCHHHHHHHHH
Confidence 4555444322222 222 235555655544
No 457
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=28.01 E-value=1.5e+02 Score=25.24 Aligned_cols=100 Identities=11% Similarity=0.120 Sum_probs=54.5
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcCh-HHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGF-DRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~-~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
++...|++..|+..|...+ +.|++.|-.|.+-+|....- ...+. ..+++++.- . ++.+.|.
T Consensus 29 L~gk~VLVVGgG~va~~ka-~~Ll~~GA~VtVvap~~~~~l~~l~~-~~~i~~i~~------~--~~~~dL~-------- 90 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRI-KGFLQEGAAITVVAPTVSAEINEWEA-KGQLRVKRK------K--VGEEDLL-------- 90 (223)
T ss_dssp CTTCCEEEECCSHHHHHHH-HHHGGGCCCEEEECSSCCHHHHHHHH-TTSCEEECS------C--CCGGGSS--------
T ss_pred cCCCEEEEECCCHHHHHHH-HHHHHCCCEEEEECCCCCHHHHHHHH-cCCcEEEEC------C--CCHhHhC--------
Confidence 5566788888888887766 56667787777777765432 23333 234554321 1 2223322
Q ss_pred cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEE-EEecc-CCcCCC
Q 046900 197 KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHL-VSDEI-YSGSAF 247 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~v-i~De~-y~~~~~ 247 (442)
...+ ++..+++| +.-..+.+.|+ .+++| ++|+. +++|.+
T Consensus 91 ---~adL-VIaAT~d~-------~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~ 131 (223)
T 3dfz_A 91 ---NVFF-IVVATNDQ-------AVNKFVKQHIK-NDQLVNMASSFSDGNIQI 131 (223)
T ss_dssp ---SCSE-EEECCCCT-------HHHHHHHHHSC-TTCEEEC-----CCSEEC
T ss_pred ---CCCE-EEECCCCH-------HHHHHHHHHHh-CCCEEEEeCCcccCeEEE
Confidence 3334 44545554 23456777787 77776 55554 555443
No 458
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=27.58 E-value=1.1e+02 Score=28.18 Aligned_cols=28 Identities=14% Similarity=0.391 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeecCCce
Q 046900 336 RERLQKRYQMIIEGLRSAGIECLKGNAG 363 (442)
Q Consensus 336 ~~~~~~~~~~l~~~L~~~g~~~~~~~~g 363 (442)
++.+.+..+.+.+.+.+.|+.+.-.+-|
T Consensus 247 ~~~~~~~~~~~~~~~~~~g~pv~iGEfG 274 (345)
T 3ndz_A 247 KSSLDSEFDAVYNKFVKNGRAVVIGEMG 274 (345)
T ss_dssp HHHHHHHHHHHHHHTGGGTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeec
Confidence 3445555556666776777776655544
No 459
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=27.55 E-value=1.8e+02 Score=26.07 Aligned_cols=55 Identities=9% Similarity=0.141 Sum_probs=31.3
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc---CcEEEE
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK---NIHLVS 238 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~---~~~vi~ 238 (442)
.+|.+.+++.++...+. .+..++++ -++=-+..++.+|++++++.+.+. ++.||.
T Consensus 24 ~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 24 SIHYEQLRDLIDWHIEN--GTDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CcCHHHHHHHHHHHHHc--CCCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 57777777777654433 33454443 233233457777777777766543 345554
No 460
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=27.50 E-value=3e+02 Score=23.75 Aligned_cols=97 Identities=16% Similarity=0.207 Sum_probs=49.1
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|..|++..-.- ..+......++..+..|- -|.+.+++.+++..+...+
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 87 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKALNLPNTLCAQVDV-----TDKYTFDTAITRAEKIYGP 87 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH----HHHHTTCCTTEEEEECCT-----TCHHHHHHHHHHHHHHHCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHhhcCCceEEEecC-----CCHHHHHHHHHHHHHHCCC
Confidence 3466666554443455677778887777654321 111111222344444443 2567777777655443345
Q ss_pred eeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 201 VRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 201 ~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
+.+ +++|.. .+.+. ..+.++++++.+
T Consensus 88 iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 116 (266)
T 3p19_A 88 ADA-IVNNAGMMLLGQIDTQEANEWQRMFD 116 (266)
T ss_dssp EEE-EEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCE-EEECCCcCCCCCcccCCHHHHHHHHH
Confidence 664 444442 22222 346666666655
No 461
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=27.48 E-value=2.3e+02 Score=23.98 Aligned_cols=100 Identities=14% Similarity=0.220 Sum_probs=50.3
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEc-CCCCcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHh
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVP-TPYYPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAES 196 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~-~p~y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~ 196 (442)
..++||.|+...=..+.+.|.+.|..|++. ...-..... .+. ..+.++..+..|- -|.+.+++.+.+..+
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 81 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ-SNGGSAFSIGANL-----ESLHGVEALYSSLDN 81 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHH-HTTCEEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHH-hcCCceEEEecCc-----CCHHHHHHHHHHHHH
Confidence 346666655443345567777889887763 332222222 223 2566777776654 245666665554321
Q ss_pred c------CCceeEEEEeCCC-CCCCc--CCCHHHHHHHHH
Q 046900 197 K------DMRVRGVLITNPS-NPLGA--TIQRSVLEELLD 227 (442)
Q Consensus 197 ~------~~~~~~v~l~~P~-NPtG~--~~~~~~l~~l~~ 227 (442)
. ..+... +++|.. .+.+. -.+.+++++..+
T Consensus 82 ~~~~~~~~~~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 120 (255)
T 3icc_A 82 ELQNRTGSTKFDI-LINNAGIGPGAFIEETTEQFFDRMVS 120 (255)
T ss_dssp HHHHHHSSSCEEE-EEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HhcccccCCcccE-EEECCCCCCCCChhhCCHHHHHHHHh
Confidence 1 112554 444442 33332 245566665554
No 462
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=27.45 E-value=1.4e+02 Score=23.24 Aligned_cols=21 Identities=19% Similarity=0.186 Sum_probs=17.1
Q ss_pred HHHHHHHHhcCcEEEEeccCC
Q 046900 223 EELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 223 ~~l~~~~~~~~~~vi~De~y~ 243 (442)
+++.++|+++|+.+|-+.+.+
T Consensus 107 ~~~~~~a~~~Gir~vgpnc~g 127 (140)
T 1iuk_A 107 PEFEKALKEAGIPVVADRCLM 127 (140)
T ss_dssp HHHHHHHHHTTCCEEESCCHH
T ss_pred HHHHHHHHHcCCEEEcCCccc
Confidence 677888889999999877754
No 463
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=27.41 E-value=1.1e+02 Score=18.86 Aligned_cols=28 Identities=7% Similarity=0.079 Sum_probs=22.7
Q ss_pred EEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 046900 410 WFRVCFANMSEQTLEVALKRIHNFMQKR 437 (442)
Q Consensus 410 ~iRls~~~~~~e~i~~~l~~l~~~l~~~ 437 (442)
.+|||+..-+..+-+++...|.+++.++
T Consensus 3 rvrisitartkkeaekfaailikvfael 30 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAEL 30 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHHh
Confidence 4899997557888999998888887764
No 464
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=27.40 E-value=1.4e+02 Score=27.32 Aligned_cols=37 Identities=16% Similarity=0.075 Sum_probs=31.9
Q ss_pred CCCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 209 PSNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 209 P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
-.+|.|...+.+.+.++++.|+++|+-|++|-.|++.
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~ 85 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDT 85 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 4678888889999999999999999999999766654
No 465
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=27.34 E-value=1.8e+02 Score=24.01 Aligned_cols=63 Identities=16% Similarity=0.102 Sum_probs=31.1
Q ss_pred EEEecChHHHHHHHHHhhc-CCCCeEEEcCCCCc-ChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHH
Q 046900 123 IVVTAGATAANELLTFILA-DPGDALLVPTPYYP-GFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYK 192 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~-~~gd~Vl~~~p~y~-~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~ 192 (442)
|+||.++...=..+.+.|. +.|..|.+..-.-. ....... .+.++..+..|- -|.+.++++++
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~-----~d~~~~~~~~~ 72 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII--DHERVTVIEGSF-----QNPGXLEQAVT 72 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH--TSTTEEEEECCT-----TCHHHHHHHHT
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc--CCCceEEEECCC-----CCHHHHHHHHc
Confidence 6777653333334456666 68877766532211 1111110 233334444332 26788888775
No 466
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=27.25 E-value=2.2e+02 Score=23.49 Aligned_cols=68 Identities=9% Similarity=0.108 Sum_probs=35.1
Q ss_pred EEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCC-HHHHHHHHHHHHhcCCce
Q 046900 123 IVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQIT-PQALEAAYKEAESKDMRV 201 (442)
Q Consensus 123 i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d-~~~l~~~l~~~~~~~~~~ 201 (442)
|+||.|+...=..++..|.+.|..|.+..-.-.... . ..+++++..++ .| .+.+.+++. ++
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~-~~~~~~~~~D~-------~d~~~~~~~~~~-------~~ 64 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP---Q-YNNVKAVHFDV-------DWTPEEMAKQLH-------GM 64 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC---C-CTTEEEEECCT-------TSCHHHHHTTTT-------TC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh---h-cCCceEEEecc-------cCCHHHHHHHHc-------CC
Confidence 677765433334455677778877765432211111 1 13445444433 24 677777664 45
Q ss_pred eEEEEeC
Q 046900 202 RGVLITN 208 (442)
Q Consensus 202 ~~v~l~~ 208 (442)
.+|+.+.
T Consensus 65 d~vi~~a 71 (219)
T 3dqp_A 65 DAIINVS 71 (219)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 6666543
No 467
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=27.19 E-value=2.5e+02 Score=25.24 Aligned_cols=102 Identities=17% Similarity=0.148 Sum_probs=55.4
Q ss_pred CcEEEecC-hHHHHHHHHHhhcCCCCeEEE-cCCC--CcChHH---hHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHH
Q 046900 121 NRIVVTAG-ATAANELLTFILADPGDALLV-PTPY--YPGFDR---DLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKE 193 (442)
Q Consensus 121 ~~i~~t~G-~~~ai~~~~~~l~~~gd~Vl~-~~p~--y~~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~ 193 (442)
..|+||.| +.-+-. ++..|++.|..|.+ .... .+.-.. .+. ..|++++..++. |.+.+.+++++
T Consensus 11 ~~IlVtGatG~iG~~-l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~-~~~v~~~~~Dl~-------d~~~l~~~~~~ 81 (346)
T 3i6i_A 11 GRVLIAGATGFIGQF-VATASLDAHRPTYILARPGPRSPSKAKIFKALE-DKGAIIVYGLIN-------EQEAMEKILKE 81 (346)
T ss_dssp CCEEEECTTSHHHHH-HHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH-HTTCEEEECCTT-------CHHHHHHHHHH
T ss_pred CeEEEECCCcHHHHH-HHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH-hCCcEEEEeecC-------CHHHHHHHHhh
Confidence 46888876 444434 44555556654443 3322 111111 122 257777665543 67889998875
Q ss_pred HHhcCCceeEEEEeCC-CCCCCcCCCHHHHHHHHHHHHhcC-cEEEEeccCC
Q 046900 194 AESKDMRVRGVLITNP-SNPLGATIQRSVLEELLDFATRKN-IHLVSDEIYS 243 (442)
Q Consensus 194 ~~~~~~~~~~v~l~~P-~NPtG~~~~~~~l~~l~~~~~~~~-~~vi~De~y~ 243 (442)
. ++..||.+.. .|..| -..+++.|++.+ +-.++=..|+
T Consensus 82 ~-----~~d~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~v~S~~g 121 (346)
T 3i6i_A 82 H-----EIDIVVSTVGGESILD-------QIALVKAMKAVGTIKRFLPSEFG 121 (346)
T ss_dssp T-----TCCEEEECCCGGGGGG-------HHHHHHHHHHHCCCSEEECSCCS
T ss_pred C-----CCCEEEECCchhhHHH-------HHHHHHHHHHcCCceEEeecccC
Confidence 2 4555665543 34333 368888888887 5444323443
No 468
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=27.15 E-value=2.1e+02 Score=25.70 Aligned_cols=56 Identities=14% Similarity=0.181 Sum_probs=33.4
Q ss_pred CcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc---CcEEEE
Q 046900 180 FQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK---NIHLVS 238 (442)
Q Consensus 180 ~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~---~~~vi~ 238 (442)
..+|.+.+++.++...+. .+..++++ -++=-+..++.+|++++++.+.+. ++.||.
T Consensus 27 g~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQ--GIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp SSBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCcCHHHHHHHHHHHHHc--CCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 358888888877655443 34455543 222223457888888888776543 455554
No 469
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=27.13 E-value=2.9e+02 Score=23.46 Aligned_cols=7 Identities=14% Similarity=0.164 Sum_probs=4.1
Q ss_pred CcEEEEe
Q 046900 233 NIHLVSD 239 (442)
Q Consensus 233 ~~~vi~D 239 (442)
++.|.+|
T Consensus 173 ~~~I~v~ 179 (230)
T 1tqj_A 173 DPWIEVD 179 (230)
T ss_dssp CCEEEEE
T ss_pred CCcEEEE
Confidence 5566665
No 470
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=27.00 E-value=2.2e+02 Score=21.95 Aligned_cols=55 Identities=13% Similarity=0.104 Sum_probs=35.6
Q ss_pred HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc
Q 046900 161 LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK 232 (442)
Q Consensus 161 ~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~ 232 (442)
++ ..|.+++.+-.+ .+++++.++..+. ++++|.++.-..++ .+.++++++..++.
T Consensus 27 l~-~~G~~Vi~lG~~------~p~e~~v~~a~~~-----~~d~v~lS~~~~~~-----~~~~~~~i~~l~~~ 81 (137)
T 1ccw_A 27 FT-NAGFNVVNIGVL------SPQELFIKAAIET-----KADAILVSSLYGQG-----EIDCKGLRQKCDEA 81 (137)
T ss_dssp HH-HTTCEEEEEEEE------ECHHHHHHHHHHH-----TCSEEEEEECSSTH-----HHHHTTHHHHHHHT
T ss_pred HH-HCCCEEEECCCC------CCHHHHHHHHHhc-----CCCEEEEEecCcCc-----HHHHHHHHHHHHhc
Confidence 44 489999877543 5678888877764 66777777544322 34466677666654
No 471
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=26.74 E-value=2.1e+02 Score=25.90 Aligned_cols=104 Identities=11% Similarity=0.048 Sum_probs=56.3
Q ss_pred cCCCcEEEecChHHHHHHHHHhhcCCCC--eEEEc--CCCCcChHHh--HhhhcCcEEEEEecCCCCCCcCCHHHHHHHH
Q 046900 118 FDLNRIVVTAGATAANELLTFILADPGD--ALLVP--TPYYPGFDRD--LRWRTGIKIVPIHCDSSNNFQITPQALEAAY 191 (442)
Q Consensus 118 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd--~Vl~~--~p~y~~~~~~--~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l 191 (442)
+...++++|-|.+.....++....+.|. +|++. .|.+.+...+ +. ..|+.+..++- ..+...+
T Consensus 119 I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~-~~gI~vtli~D----------sa~~~~m 187 (315)
T 3ecs_A 119 IKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALC-HLNVPVTVVLD----------AAVGYIM 187 (315)
T ss_dssp CCTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHH-TTTCCEEEECG----------GGHHHHG
T ss_pred cCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHHHH-HcCCCEEEEeh----------hHHHHHH
Confidence 4566788888876666666655545553 45543 3444433221 22 26887776652 1222222
Q ss_pred HHHHhcCCceeEEEEeC-CCCCCCcCCCHHHHHHHHHHHHhcCcEEEEe
Q 046900 192 KEAESKDMRVRGVLITN-PSNPLGATIQRSVLEELLDFATRKNIHLVSD 239 (442)
Q Consensus 192 ~~~~~~~~~~~~v~l~~-P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~D 239 (442)
+ ++..+++.. ---..|.++++----.++-.|+.+++++++=
T Consensus 188 ~-------~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 188 E-------KADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp G-------GCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred H-------hCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 2 344555432 2233444444444457777888999887653
No 472
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=26.42 E-value=2.9e+02 Score=24.39 Aligned_cols=117 Identities=13% Similarity=0.133 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCC--CeEEEc--CCCCcChHHh--HhhhcCcEEEE
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPG--DALLVP--TPYYPGFDRD--LRWRTGIKIVP 171 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~g--d~Vl~~--~p~y~~~~~~--~~~~~G~~v~~ 171 (442)
...++.|+++-... +...+.++|-+.+.....+++.+.+.| -+|++. .|.+.+...+ +. ..|+++..
T Consensus 93 ~~~~~~Ia~~a~~~------I~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG~~~a~~L~-~~gI~vtl 165 (276)
T 1vb5_A 93 EEAKRELASIGAQL------IDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLARELE-FSGIEFEV 165 (276)
T ss_dssp HHHHHHHHHHHHHH------CCTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTTTTHHHHHHHHHH-HTTCCEEE
T ss_pred HHHHHHHHHHHHHH------ccCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCcchhhHHHHHHHH-HCCCCEEE
Confidence 34455566655543 345567776654444445555554433 356663 4555542222 22 26888877
Q ss_pred EecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeC-CCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 172 IHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITN-PSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 172 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~-P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
+.-. .+-..+. ++..+++.. --...|.++++-.--.++..|+.+++.+++
T Consensus 166 i~ds----------a~~~~m~-------~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V 216 (276)
T 1vb5_A 166 ITDA----------QMGLFCR-------EASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYV 216 (276)
T ss_dssp ECGG----------GHHHHHT-------TCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred EcHH----------HHHHHHc-------cCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEE
Confidence 7621 1222232 455555542 223445555444455777788888877655
No 473
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=26.40 E-value=1.5e+02 Score=29.42 Aligned_cols=98 Identities=15% Similarity=0.186 Sum_probs=57.1
Q ss_pred EEEecChHH----HHHHHHH-----hhcCCCCeEEEcCCCCcChH-------HhHhhhcCcEEEEEecCCC-CCCcCCHH
Q 046900 123 IVVTAGATA----ANELLTF-----ILADPGDALLVPTPYYPGFD-------RDLRWRTGIKIVPIHCDSS-NNFQITPQ 185 (442)
Q Consensus 123 i~~t~G~~~----ai~~~~~-----~l~~~gd~Vl~~~p~y~~~~-------~~~~~~~G~~v~~v~~~~~-~~~~~d~~ 185 (442)
|++++|++. ++..+.. ...+++|.|++.....++.. .... ..|++++......- -.-..|.+
T Consensus 309 vi~~tg~~ge~~~~l~ria~~~h~~~~~~~~~~vi~s~~~~~G~~~~~~~~~~~l~-~~g~~v~~~~~~~i~~SgHa~~~ 387 (562)
T 3bk2_A 309 LILATGSQGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINRLY-ALGAYVLYPPTYKVHASGHASQE 387 (562)
T ss_dssp EEEECCTTSCSHHHHHHHHTTCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHH-HTTCEEECTTTSSSCCCSSCCHH
T ss_pred EEEEcCCCchhHHHHHhhhhcccccccCCCCCEEEEECCCCCCCeEehhhhcCcee-eCCCEEEEccCCceEEeCCCCHH
Confidence 777777632 2232221 12378999999887666642 2223 37888875421100 01135789
Q ss_pred HHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCc
Q 046900 186 ALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNI 234 (442)
Q Consensus 186 ~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~ 234 (442)
+|...++.. +++.++.+. |. ...+.++++++++.++
T Consensus 388 eL~~~i~~~-----~Pk~vipvH-----Ge---~~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 388 ELKLILNLT-----TPRFFLPWH-----GE---VRHQMNFKWLAESMSR 423 (562)
T ss_dssp HHHHHHHHH-----CCSEEEEES-----BC---HHHHHHHHHHHHTSSS
T ss_pred HHHHHHHhc-----CCCEEEEEc-----CC---HHHHHHHHHHHHHcCC
Confidence 999988875 667777663 32 2346677777776653
No 474
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=26.36 E-value=55 Score=29.43 Aligned_cols=76 Identities=9% Similarity=0.149 Sum_probs=42.4
Q ss_pred CCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHH
Q 046900 151 TPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFAT 230 (442)
Q Consensus 151 ~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~ 230 (442)
.|+|..+.+.... ...+++-+-...+ .-++.++++++. .++.+++.. +|. +.++.+++.+.|+
T Consensus 56 ~~vy~sl~el~~~-~~~Dv~ii~vp~~----~~~~~v~ea~~~------Gi~~vVi~t----~G~--~~~~~~~l~~~A~ 118 (294)
T 2yv1_A 56 VPVFDTVKEAVKE-TDANASVIFVPAP----FAKDAVFEAIDA------GIELIVVIT----EHI--PVHDTMEFVNYAE 118 (294)
T ss_dssp EEEESSHHHHHHH-HCCCEEEECCCHH----HHHHHHHHHHHT------TCSEEEECC----SCC--CHHHHHHHHHHHH
T ss_pred EeeeCCHHHHhhc-CCCCEEEEccCHH----HHHHHHHHHHHC------CCCEEEEEC----CCC--CHHHHHHHHHHHH
Confidence 3445555554441 2445444332210 123444444432 566555432 343 5677889999999
Q ss_pred hcCcEEEEeccCC
Q 046900 231 RKNIHLVSDEIYS 243 (442)
Q Consensus 231 ~~~~~vi~De~y~ 243 (442)
++++.++-..+.+
T Consensus 119 ~~gi~viGPNc~G 131 (294)
T 2yv1_A 119 DVGVKIIGPNTPG 131 (294)
T ss_dssp HHTCEEECSSCCE
T ss_pred HcCCEEEcCCCce
Confidence 9999888777765
No 475
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=26.25 E-value=1.6e+02 Score=25.94 Aligned_cols=54 Identities=15% Similarity=0.116 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC--HHHHHHHHHHHHhcCcEEEEecc
Q 046900 182 ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ--RSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 182 ~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~--~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
++.+++++.+....+.-+. ++-+ ||-+|..++ .+-++.+.+.++++|++++ |.-
T Consensus 107 ~s~~ei~~~l~~al~~vP~--a~Gv---nNHmGS~~T~~~~~M~~vm~~L~~~gL~Fl-DS~ 162 (261)
T 2qv5_A 107 DPAKVNIDRLHRSMAKITN--YTGV---MNYLGGRFLAEQSALEPVMRDIGKRGLLFL-DDG 162 (261)
T ss_dssp SCHHHHHHHHHHHHTTCCC--CSEE---EEEECTTGGGCHHHHHHHHHHHHHTTCEEE-ECS
T ss_pred CCHHHHHHHHHHHHHHCCC--cEEE---ecccccchhcCHHHHHHHHHHHHHCCCEEE-cCC
Confidence 5688999888876543222 2222 366777654 5569999999999886544 543
No 476
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=26.20 E-value=3.4e+02 Score=23.97 Aligned_cols=55 Identities=11% Similarity=0.149 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCc--EEEEe
Q 046900 185 QALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNI--HLVSD 239 (442)
Q Consensus 185 ~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~--~vi~D 239 (442)
+.+.+.++..++.|..+.+-+.+....|.+...+.+.+.++++.+.+.|+ +-|.|
T Consensus 120 ~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~D 176 (295)
T 1ydn_A 120 ERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGD 176 (295)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecC
Confidence 33333444444455544433333334455555667777777776666653 44444
No 477
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=25.93 E-value=1.1e+02 Score=29.88 Aligned_cols=24 Identities=13% Similarity=0.245 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHhcCcEEEEeccCC
Q 046900 220 SVLEELLDFATRKNIHLVSDEIYS 243 (442)
Q Consensus 220 ~~l~~l~~~~~~~~~~vi~De~y~ 243 (442)
+.++++++.|.++|+.+|+|-.+.
T Consensus 86 ~~~d~vv~~a~~~Gi~vildlH~~ 109 (515)
T 3icg_A 86 KRVEEIANYAFDNDMYVIINLHHE 109 (515)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCSC
T ss_pred HHHHHHHHHHHHCCCEEEEecCCC
Confidence 446666666666666666665443
No 478
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=25.77 E-value=1.8e+02 Score=29.33 Aligned_cols=65 Identities=22% Similarity=0.291 Sum_probs=37.1
Q ss_pred CCCCeEEEcCCCCcChHHh---HhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC
Q 046900 142 DPGDALLVPTPYYPGFDRD---LRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ 218 (442)
Q Consensus 142 ~~gd~Vl~~~p~y~~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~ 218 (442)
++||.|.+..|.-+.+.-+ +. +.|+-.++++ . .+..+.+...+++. ++++++..+.....|...+
T Consensus 137 ~~Gd~V~i~~~~~~e~v~a~lA~~-~~Gav~vpl~--~----~~~~~~l~~~l~~~-----~~~~li~~~~~~~~~~~~~ 204 (663)
T 1ry2_A 137 RKGDTVAVYMPMVPEAIITLLAIS-RIGAIHSVVF--A----GFSSNSLRDRINDG-----DSKVVITTDESNRGGKVIE 204 (663)
T ss_dssp CTTCEEEECCCSSHHHHHHHHHHH-HTTCEEEECC--T----TSCHHHHHHHHHHH-----TCSEEEEESBCCBTTBCCB
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHH-HcCCEEEeeC--C----CCCHHHHHHHHHhc-----CCeEEEEccccccCCcccc
Confidence 4678887776665443322 22 3677555443 2 14567777777764 5666665554444455554
No 479
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=25.40 E-value=1.2e+02 Score=26.86 Aligned_cols=58 Identities=19% Similarity=0.251 Sum_probs=35.3
Q ss_pred hcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCC--HHHHHHHHHHHHhcCcEEEEecc
Q 046900 164 RTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQ--RSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 164 ~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~--~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
+.|+.++... +++++++... ...++++. .|..-+ .+.+.+.++.+++++.++|.|-+
T Consensus 38 a~GasP~M~~---------~~~e~~e~~~-------~a~alvIn-----~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPV 96 (273)
T 3dzv_A 38 YIDAKPIMAD---------DPREFPQMFQ-------QTSALVLN-----LGHLSQEREQSLLAASDYARQVNKLTVVDLV 96 (273)
T ss_dssp HTTCEEECCC---------CGGGHHHHHT-------TCSEEEEE-----CCSCCHHHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred HcCCchhhcC---------CHHHHHHHHH-------HCCeEEEe-----cCCCChHHHHHHHHHHHHHHHcCCcEEEchh
Confidence 5888766543 3466666654 34455554 444322 13455566667888899999977
Q ss_pred C
Q 046900 242 Y 242 (442)
Q Consensus 242 y 242 (442)
-
T Consensus 97 g 97 (273)
T 3dzv_A 97 G 97 (273)
T ss_dssp T
T ss_pred h
Confidence 3
No 480
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=25.32 E-value=1.4e+02 Score=26.54 Aligned_cols=50 Identities=18% Similarity=0.205 Sum_probs=35.4
Q ss_pred CCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEEec
Q 046900 179 NFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVSDE 240 (442)
Q Consensus 179 ~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De 240 (442)
+|-+|+..+.++..- ...+|++... .++.++++++++.|++.|+-++++-
T Consensus 127 dfi~d~~qi~ea~~~------GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 127 DFLFDPYQVYEARSW------GADCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SCCCSTHHHHHHHHT------TCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCHHHHHHHHHc------CCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 466777777766542 4556666522 4677889999999999998777664
No 481
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=25.30 E-value=79 Score=28.96 Aligned_cols=36 Identities=19% Similarity=0.112 Sum_probs=31.4
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCcEEEEeccCCcC
Q 046900 210 SNPLGATIQRSVLEELLDFATRKNIHLVSDEIYSGS 245 (442)
Q Consensus 210 ~NPtG~~~~~~~l~~l~~~~~~~~~~vi~De~y~~~ 245 (442)
.||.|-..+.+...++++.|+++|+.+++|=.|++.
T Consensus 50 v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~ 85 (334)
T 1fob_A 50 VNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDT 85 (334)
T ss_dssp SCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred ECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 578788889999999999999999999999777654
No 482
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=25.29 E-value=95 Score=27.57 Aligned_cols=23 Identities=26% Similarity=0.235 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHhcCcEEEEecc
Q 046900 219 RSVLEELLDFATRKNIHLVSDEI 241 (442)
Q Consensus 219 ~~~l~~l~~~~~~~~~~vi~De~ 241 (442)
.+.+.+++++|.++|+.||.|-.
T Consensus 89 ~~~~d~~~~~a~~~Gi~vil~~~ 111 (351)
T 3vup_A 89 LDDMKDLLDTAKKYNILVFPCLW 111 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCeEEEEec
Confidence 35688999999999999998864
No 483
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=25.21 E-value=2e+02 Score=25.74 Aligned_cols=48 Identities=6% Similarity=-0.015 Sum_probs=26.6
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHh
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATR 231 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~ 231 (442)
.+|.+.+++.++...+. .+..++++ -++=-+..++.+|++++++.+.+
T Consensus 29 ~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~ 76 (301)
T 1xky_A 29 NIDFAKTTKLVNYLIDN--GTTAIVVG-GTTGESPTLTSEEKVALYRHVVS 76 (301)
T ss_dssp SBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHH
Confidence 57777777776654433 33444443 22222345677777777776654
No 484
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=24.91 E-value=1.9e+02 Score=25.70 Aligned_cols=55 Identities=9% Similarity=0.099 Sum_probs=31.0
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc---CcEEEE
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK---NIHLVS 238 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~---~~~vi~ 238 (442)
.+|.+.+++.++...+. .+..++++ -++=-+..++.+|++++++.+.+. ++.||.
T Consensus 18 ~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 18 GVDWKSLEKLVEWHIEQ--GTNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp CBCHHHHHHHHHHHHHH--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CcCHHHHHHHHHHHHHC--CCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 57777777777654433 33454433 222233457777777777766543 344544
No 485
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=24.76 E-value=2.5e+02 Score=24.07 Aligned_cols=84 Identities=13% Similarity=0.097 Sum_probs=41.1
Q ss_pred CCCcEEEecChH--HHHHHHHHhhcCCCCeEEEcCCCCcC---hHHhHhhhcCc-EEEEEecCCCCCCcCCHHHHHHHHH
Q 046900 119 DLNRIVVTAGAT--AANELLTFILADPGDALLVPTPYYPG---FDRDLRWRTGI-KIVPIHCDSSNNFQITPQALEAAYK 192 (442)
Q Consensus 119 ~~~~i~~t~G~~--~ai~~~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~~G~-~v~~v~~~~~~~~~~d~~~l~~~l~ 192 (442)
+...++||.|+. ..=..+.+.|.+.|..|++..-.-.. ...... ..+. ++..+..|- -|.+.+++.++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~-----~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAG-TLDRNDSIILPCDV-----TNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH-TSSSCCCEEEECCC-----SSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHH-hcCCCCceEEeCCC-----CCHHHHHHHHH
Confidence 344577777652 23334556777788887765432111 111122 1222 445555443 24566776666
Q ss_pred HHHhcCCceeEEEEeCC
Q 046900 193 EAESKDMRVRGVLITNP 209 (442)
Q Consensus 193 ~~~~~~~~~~~v~l~~P 209 (442)
+..+...+... +++|.
T Consensus 80 ~~~~~~g~id~-li~~A 95 (266)
T 3oig_A 80 SIKEQVGVIHG-IAHCI 95 (266)
T ss_dssp HHHHHHSCCCE-EEECC
T ss_pred HHHHHhCCeeE-EEEcc
Confidence 54433334554 44444
No 486
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=24.68 E-value=1.3e+02 Score=25.41 Aligned_cols=39 Identities=13% Similarity=0.348 Sum_probs=25.5
Q ss_pred cCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCcEEEE
Q 046900 197 KDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNIHLVS 238 (442)
Q Consensus 197 ~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~~vi~ 238 (442)
.|-.+.+++..--.|+.|..+..+ ++.++|++|++.+|.
T Consensus 156 AGl~Pa~vicEi~~~~dG~mar~~---~l~~fA~~h~l~iit 194 (204)
T 1tks_A 156 AGLQPAGVICELVRDEDGLMMRLD---DCIQFGKKHGIKIIN 194 (204)
T ss_dssp TTSCSBEEEEEBBCTTTCCBCBHH---HHHHHHHHHTCCEEE
T ss_pred cCCCceEEEEEEeECCCCCcCCHH---HHHHHHHHcCCcEEE
Confidence 344555544434458999998854 555667799987764
No 487
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=24.66 E-value=1.1e+02 Score=27.42 Aligned_cols=76 Identities=17% Similarity=0.264 Sum_probs=43.6
Q ss_pred CCCCcChHHhHhhhcC-cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHH
Q 046900 151 TPYYPGFDRDLRWRTG-IKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFA 229 (442)
Q Consensus 151 ~p~y~~~~~~~~~~~G-~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~ 229 (442)
.|+|....+.... .+ .+++-+-...+ .-++.++++++. .++.+++.+ +| ++.++.+++.+.|
T Consensus 56 ~~vy~sl~el~~~-~~~~DvaIi~vp~~----~~~~~v~ea~~~------Gi~~vVi~t----~G--~~~~~~~~l~~~A 118 (297)
T 2yv2_A 56 VPVYDSVKEALAE-HPEINTSIVFVPAP----FAPDAVYEAVDA------GIRLVVVIT----EG--IPVHDTMRFVNYA 118 (297)
T ss_dssp EEEESSHHHHHHH-CTTCCEEEECCCGG----GHHHHHHHHHHT------TCSEEEECC----CC--CCHHHHHHHHHHH
T ss_pred EeeeCCHHHHhhc-CCCCCEEEEecCHH----HHHHHHHHHHHC------CCCEEEEEC----CC--CCHHHHHHHHHHH
Confidence 3445555544331 23 45444432221 224555555543 567555432 34 3567788999999
Q ss_pred HhcCcEEEEeccCC
Q 046900 230 TRKNIHLVSDEIYS 243 (442)
Q Consensus 230 ~~~~~~vi~De~y~ 243 (442)
+++++.++-..+.+
T Consensus 119 ~~~gi~viGPNc~G 132 (297)
T 2yv2_A 119 RQKGATIIGPNCPG 132 (297)
T ss_dssp HHHTCEEECSSSCE
T ss_pred HHcCCEEEcCCCCe
Confidence 99999888777765
No 488
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=24.58 E-value=2e+02 Score=25.67 Aligned_cols=49 Identities=12% Similarity=0.093 Sum_probs=30.5
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK 232 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~ 232 (442)
.+|.+.+++.++...+. .+..++++ -++==+..++.+|++++++.+.+.
T Consensus 20 ~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 20 TVDIDAMIAHARRCLSN--GCDSVTLF-GTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp SBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 58888888877755443 34455543 222223457888888888877654
No 489
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=24.53 E-value=3.2e+02 Score=23.32 Aligned_cols=73 Identities=23% Similarity=0.332 Sum_probs=38.9
Q ss_pred CcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCc
Q 046900 121 NRIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMR 200 (442)
Q Consensus 121 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (442)
..++||.|+...=..+.+.|.+.|..|++..-.-... ..+.. +..|- -|.+.+++.+++..++..+
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~--~~~Dl-----~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------EGFLA--VKCDI-----TDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------TTSEE--EECCT-----TSHHHHHHHHHHHHHHTCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------ccceE--EEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 3466666554433455677778888777653221111 12333 33332 2577888777765444445
Q ss_pred eeEEEEe
Q 046900 201 VRGVLIT 207 (442)
Q Consensus 201 ~~~v~l~ 207 (442)
...++-+
T Consensus 88 iD~lv~n 94 (253)
T 2nm0_A 88 VEVLIAN 94 (253)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 6655544
No 490
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=24.41 E-value=1.6e+02 Score=19.53 Aligned_cols=47 Identities=13% Similarity=0.083 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhcCc
Q 046900 182 ITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRKNI 234 (442)
Q Consensus 182 ~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~ 234 (442)
++.+.|...+.......+...+++-...+-|.| .+.++.+.|++.|+
T Consensus 27 v~~~~L~~~l~~~~~~~~~~~V~I~aD~~~~y~------~vv~vmd~l~~aG~ 73 (74)
T 2jwk_A 27 LTEEMVTQLSRQEFDKDNNTLFLVGGAKEVPYE------EVIKALNLLHLAGI 73 (74)
T ss_dssp ECHHHHHHHHHHHHHHCTTCCEEEEECTTSCHH------HHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHhhCCCceEEEEcCCCCCHH------HHHHHHHHHHHcCC
Confidence 677888888877654445555666666665654 46778888887764
No 491
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=24.36 E-value=40 Score=24.52 Aligned_cols=23 Identities=17% Similarity=0.131 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhcCcEEEEeccC
Q 046900 220 SVLEELLDFATRKNIHLVSDEIY 242 (442)
Q Consensus 220 ~~l~~l~~~~~~~~~~vi~De~y 242 (442)
..-++|.++|+++|+.|+.|..-
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~L 49 (93)
T 2vt1_B 27 QCALAVRKYANEVGIPTVRDVKL 49 (93)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCCEEECHHH
Confidence 34678899999999999999763
No 492
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=24.30 E-value=1.9e+02 Score=25.13 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=49.0
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcC--cEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCC
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG--IKIVPIHCDSSNNFQITPQALEAAYKEAESKDM 199 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G--~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (442)
.++||.|+...=..+.+.|.+.|..|++..-.-......... .. .++..+..|- -|.+.+++.+++..+...
T Consensus 23 ~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 96 (272)
T 2nwq_A 23 TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGE-LSAKTRVLPLTLDV-----RDRAAMSAAVDNLPEEFA 96 (272)
T ss_dssp EEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HTTTSCEEEEECCT-----TCHHHHHHHHHTCCGGGS
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-hhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHhC
Confidence 466665544333445667778888777654322222222221 11 2455555543 367888888775433323
Q ss_pred ceeEEEEeCCC-CC-CCc--CCCHHHHHHHHH
Q 046900 200 RVRGVLITNPS-NP-LGA--TIQRSVLEELLD 227 (442)
Q Consensus 200 ~~~~v~l~~P~-NP-tG~--~~~~~~l~~l~~ 227 (442)
+..++ ++|.. .+ .+. -.+.++++++.+
T Consensus 97 ~iD~l-vnnAG~~~~~~~~~~~~~~~~~~~~~ 127 (272)
T 2nwq_A 97 TLRGL-INNAGLALGTDPAQSCDLDDWDTMVD 127 (272)
T ss_dssp SCCEE-EECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCCCcccCCHHHHHHHHH
Confidence 45544 44432 11 121 245566655554
No 493
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=24.27 E-value=2.6e+02 Score=22.44 Aligned_cols=71 Identities=7% Similarity=0.007 Sum_probs=34.8
Q ss_pred cEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcChHHhHhhhcCcEEEEEecCCCCCCcCCHHHHHHHHHHHHhcCCce
Q 046900 122 RIVVTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGIKIVPIHCDSSNNFQITPQALEAAYKEAESKDMRV 201 (442)
Q Consensus 122 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~G~~v~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (442)
.|++|.|+...=..+.+.|.+.|..|.+..-.-..... .. ..+++++..++ -|.+.+++.++ +.
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~-~~~~~~~~~D~-------~~~~~~~~~~~-------~~ 68 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-EG-PRPAHVVVGDV-------LQAADVDKTVA-------GQ 68 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-SS-CCCSEEEESCT-------TSHHHHHHHHT-------TC
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-cc-CCceEEEEecC-------CCHHHHHHHHc-------CC
Confidence 47777653333344456666777777654322111111 00 13444444332 25678887765 34
Q ss_pred eEEEEeC
Q 046900 202 RGVLITN 208 (442)
Q Consensus 202 ~~v~l~~ 208 (442)
..|+.+.
T Consensus 69 d~vi~~a 75 (206)
T 1hdo_A 69 DAVIVLL 75 (206)
T ss_dssp SEEEECC
T ss_pred CEEEECc
Confidence 5555543
No 494
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=24.08 E-value=52 Score=31.67 Aligned_cols=27 Identities=4% Similarity=0.192 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccCCc
Q 046900 218 QRSVLEELLDFATRKNIHLVSDEIYSG 244 (442)
Q Consensus 218 ~~~~l~~l~~~~~~~~~~vi~De~y~~ 244 (442)
+.++++++++.|+++|+-||.|-++-+
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH 101 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINH 101 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 679999999999999999999999775
No 495
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=23.94 E-value=2.1e+02 Score=25.52 Aligned_cols=48 Identities=6% Similarity=0.078 Sum_probs=26.4
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHh
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATR 231 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~ 231 (442)
.+|.+.+++.++...+. .+..++++ -++=-+..++.+|++++++.+.+
T Consensus 18 ~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~ 65 (292)
T 2ojp_A 18 NVCRASLKKLIDYHVAS--GTSAIVSV-GTTGESATLNHDEHADVVMMTLD 65 (292)
T ss_dssp CBCHHHHHHHHHHHHHH--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHc--CCCEEEEC-ccccchhhCCHHHHHHHHHHHHH
Confidence 57777777766654333 33444433 22222345677777777776654
No 496
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=23.92 E-value=2e+02 Score=25.95 Aligned_cols=56 Identities=7% Similarity=0.044 Sum_probs=36.7
Q ss_pred CcCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc--CcEEEE
Q 046900 180 FQITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK--NIHLVS 238 (442)
Q Consensus 180 ~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~--~~~vi~ 238 (442)
..+|.+.+++.++...+. .+..++++ -++=-+..++.+|++++++.+.+. ++.||.
T Consensus 24 g~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEV--GCEGVTVL-GILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp SCBCHHHHHHHHHHHHHT--TCSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCcCHHHHHHHHHHHHHC--CCCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 358999998888765544 34555543 222223568889999999887665 466665
No 497
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=23.87 E-value=1.3e+02 Score=26.64 Aligned_cols=39 Identities=13% Similarity=0.246 Sum_probs=26.1
Q ss_pred CCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc-CcEEEEeccCC
Q 046900 198 DMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK-NIHLVSDEIYS 243 (442)
Q Consensus 198 ~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~-~~~vi~De~y~ 243 (442)
+.++++|. +|.+.+.+.++.++++++++ +..+|.|-++.
T Consensus 72 d~~~daik-------~G~l~s~~~i~~v~~~l~~~~~~~vv~DPv~~ 111 (282)
T 3h74_A 72 QLHFDQAL-------IGYVGSVALCQQITTYLEQQTLSLLVVDPVLG 111 (282)
T ss_dssp TCCCSEEE-------ECCCCSHHHHHHHHHHHHHSCCSEEEECCCCE
T ss_pred CCccCEEE-------ECCCCCHHHHHHHHHHHHHCCCCcEEEcCeee
Confidence 34555555 57666777777777777765 46777777665
No 498
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=23.73 E-value=2e+02 Score=25.87 Aligned_cols=55 Identities=18% Similarity=0.146 Sum_probs=31.7
Q ss_pred cCCHHHHHHHHHHHHhcCCceeEEEEeCCCCCCCcCCCHHHHHHHHHHHHhc---CcEEEE
Q 046900 181 QITPQALEAAYKEAESKDMRVRGVLITNPSNPLGATIQRSVLEELLDFATRK---NIHLVS 238 (442)
Q Consensus 181 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~~~~~---~~~vi~ 238 (442)
.+|.+.+++.++...+. .+..++++ -++=-+..++.+|++++++.+.+. ++.||.
T Consensus 31 ~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTF--PFRGFVVQ-GSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CBCHHHHHHHHHHHTTS--CCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred CcCHHHHHHHHHHHHHc--CCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 57778877777655433 34455543 222122457777888888777654 355554
No 499
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=23.73 E-value=2.4e+02 Score=25.71 Aligned_cols=21 Identities=0% Similarity=-0.126 Sum_probs=9.4
Q ss_pred EEEEeecCCHHHHHHHHHHHH
Q 046900 411 FRVCFANMSEQTLEVALKRIH 431 (442)
Q Consensus 411 iRls~~~~~~e~i~~~l~~l~ 431 (442)
+|.-+..+++++.++.-+.|+
T Consensus 303 ~R~Pl~~l~~~~~~~l~~~l~ 323 (332)
T 2r8w_A 303 PPRPILPLTSAERQRVEEALE 323 (332)
T ss_dssp CCTTSCCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHH
Confidence 344333335555554444443
No 500
>2zci_A Phosphoenolpyruvate carboxykinase [GTP], phosphoenolpyruvate; GTP-dependent, signaling protein, lyase; 2.30A {Corynebacterium glutamicum}
Probab=23.72 E-value=3.7e+02 Score=26.62 Aligned_cols=112 Identities=17% Similarity=0.194 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCcEEEecChHHHHHHHHHhhcCCCCeEEEcCCCCcCh-------HHhHhhhcCcEEE
Q 046900 98 KSFRQAMASFMEQIRGGRAKFDLNRIVVTAGATAANELLTFILADPGDALLVPTPYYPGF-------DRDLRWRTGIKIV 170 (442)
Q Consensus 98 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl~~~p~y~~~-------~~~~~~~~G~~v~ 170 (442)
+++++-|++...- +.|+.|.++.|+.+=...+...+++.|..+-+..+.|+.. .+.++. -.-..+
T Consensus 18 ~~l~~~V~e~a~L-------~~Pd~I~icdGS~eE~~~l~~~~v~~G~~~~L~~~k~~n~~l~~sdp~DvARv-e~rTfI 89 (610)
T 2zci_A 18 KELLNWIADAVEL-------FQPEAVVFVDGSQAEWDRMAEDLVEAGTLIKLNEEKRPNSYLARSNPSDVARV-ESRTFI 89 (610)
T ss_dssp HHHHHHHHHHHHH-------HCCSEEEECCCCHHHHHHHHHHHHHTTSEEECCTTTSTTCEEECCCGGGSSCC-GGGEEE
T ss_pred HHHHHHHHHHHHh-------cCCCEEEEcCCCHHHHHHHHHHHHhCCCeeecCCCCCCceeecCCChhhccee-ccceEE
Confidence 5777777766552 6799999999999999999999999998777766666552 223321 222333
Q ss_pred EEecCCC----CCCcCCHHHHHHHHHHHHhcCCceeEEEEeCC-CCCCCcCCC
Q 046900 171 PIHCDSS----NNFQITPQALEAAYKEAESKDMRVRGVLITNP-SNPLGATIQ 218 (442)
Q Consensus 171 ~v~~~~~----~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~P-~NPtG~~~~ 218 (442)
..+-.++ .+ -+|+++..+.+.+..+...+-|-+++.-- --|.|..++
T Consensus 90 ~t~~~~dagptnn-w~~p~e~~~~l~~~f~G~M~GRTMYViPfsMGP~gsp~s 141 (610)
T 2zci_A 90 CSEKEEDAGPTNN-WAPPQAMKDEMSKHYAGSMKGRTMYVVPFCMGPISDPDP 141 (610)
T ss_dssp CCSSTTTTCTTSC-CCCHHHHHHHHHHHHTTTTTTSEEEEEEEEESCTTCSSC
T ss_pred ecCchhhcCCCcC-ccCHHHHHHHHHHhCCcccCCCEEEEEeeecCCCCCCcc
Confidence 3221111 12 35889999999876654444444444322 368887765
Done!