Query 046902
Match_columns 393
No_of_seqs 231 out of 1776
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 09:30:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046902.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046902hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.5 4E-11 1.4E-15 109.7 26.9 194 111-341 68-283 (315)
2 2woz_A Kelch repeat and BTB do 99.4 1.4E-10 4.9E-15 106.1 28.1 192 112-341 80-293 (318)
3 3ii7_A Kelch-like protein 7; p 99.4 2.3E-11 7.9E-16 110.7 22.0 210 96-342 51-279 (306)
4 2xn4_A Kelch-like protein 2; s 99.4 9.5E-11 3.3E-15 106.4 23.3 206 97-341 58-282 (302)
5 1zgk_A Kelch-like ECH-associat 99.4 6.6E-11 2.3E-15 107.9 21.7 194 110-342 90-294 (308)
6 2vpj_A Kelch-like protein 12; 99.4 1.7E-10 5.9E-15 104.6 23.6 207 96-341 58-284 (301)
7 3ii7_A Kelch-like protein 7; p 99.3 1.2E-10 4.1E-15 106.0 19.7 237 109-389 23-277 (306)
8 2vpj_A Kelch-like protein 12; 99.3 2.4E-10 8.1E-15 103.7 21.5 236 110-388 31-282 (301)
9 1zgk_A Kelch-like ECH-associat 99.3 9.7E-11 3.3E-15 106.8 16.8 238 109-388 38-291 (308)
10 2xn4_A Kelch-like protein 2; s 99.3 3E-10 1E-14 103.1 18.8 236 110-388 30-280 (302)
11 2uvk_A YJHT; unknown function, 99.3 7E-11 2.4E-15 110.0 14.8 262 96-391 15-349 (357)
12 4asc_A Kelch repeat and BTB do 99.2 1.3E-09 4.6E-14 99.4 22.3 196 110-341 13-227 (315)
13 2woz_A Kelch repeat and BTB do 99.2 2.5E-09 8.7E-14 97.7 20.3 224 101-365 16-261 (318)
14 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 2.1E-11 7.1E-16 79.8 0.8 41 2-42 9-49 (53)
15 2uvk_A YJHT; unknown function, 99.0 5.4E-08 1.9E-12 90.3 23.7 199 110-341 86-348 (357)
16 2e31_A FBS1, F-box only protei 99.0 3.8E-11 1.3E-15 106.6 1.9 48 2-49 51-99 (297)
17 2ovr_B FBW7, F-BOX/WD repeat p 99.0 2.4E-07 8.1E-12 88.5 27.9 275 1-338 18-311 (445)
18 2zwa_A Leucine carboxyl methyl 99.0 2.2E-08 7.5E-13 101.4 19.9 216 99-343 396-643 (695)
19 3v7d_B Cell division control p 99.0 6.4E-07 2.2E-11 85.8 29.0 43 2-44 15-58 (464)
20 1p22_A F-BOX/WD-repeat protein 98.9 1.6E-07 5.5E-12 89.5 19.7 284 2-339 11-329 (435)
21 1k3i_A Galactose oxidase precu 98.6 1.3E-06 4.5E-11 87.9 16.7 106 111-240 220-329 (656)
22 2zwa_A Leucine carboxyl methyl 98.5 2.6E-06 8.9E-11 86.2 15.9 204 166-388 410-639 (695)
23 1k3i_A Galactose oxidase precu 98.1 2E-05 6.9E-10 79.2 11.8 198 112-341 168-384 (656)
24 3l2o_B F-box only protein 4; s 98.0 9E-07 3.1E-11 77.7 -0.5 49 2-50 5-53 (312)
25 2ast_B S-phase kinase-associat 97.4 2.3E-05 8E-10 71.6 0.1 39 2-40 9-47 (336)
26 2p1m_B Transport inhibitor res 96.9 0.00011 3.8E-09 72.6 -0.5 35 1-35 5-40 (594)
27 3dsm_A Uncharacterized protein 96.7 0.31 1E-05 43.8 21.8 200 100-343 2-221 (328)
28 3jrp_A Fusion protein of prote 96.6 0.14 4.7E-06 46.3 18.2 196 102-337 25-242 (379)
29 3ei3_B DNA damage-binding prot 96.5 0.44 1.5E-05 43.3 22.1 195 102-338 88-285 (383)
30 3ogk_B Coronatine-insensitive 96.3 0.00062 2.1E-08 67.2 -0.3 33 3-35 14-47 (592)
31 3jro_A Fusion protein of prote 96.0 0.48 1.6E-05 48.0 19.5 196 102-337 23-240 (753)
32 3mbr_X Glutamine cyclotransfer 95.8 0.46 1.6E-05 40.7 15.5 113 209-343 28-142 (243)
33 4gqb_B Methylosome protein 50; 95.7 1.1 3.8E-05 40.4 19.4 198 98-341 91-295 (344)
34 1gxr_A ESG1, transducin-like e 95.6 1.1 3.9E-05 39.3 24.9 197 98-341 60-261 (337)
35 2ojh_A Uncharacterized protein 95.4 1 3.5E-05 38.6 17.2 201 98-341 50-264 (297)
36 3u4y_A Uncharacterized protein 95.3 1.5 5E-05 38.7 22.7 192 100-338 9-210 (331)
37 1l0q_A Surface layer protein; 95.1 1.9 6.4E-05 39.1 21.9 188 98-339 40-237 (391)
38 3nol_A Glutamine cyclotransfer 94.9 0.57 2E-05 40.6 13.3 113 209-343 50-164 (262)
39 3hfq_A Uncharacterized protein 94.7 1.7 5.7E-05 38.8 16.7 122 210-341 49-178 (347)
40 1l0q_A Surface layer protein; 94.6 2.5 8.6E-05 38.2 20.7 188 101-341 86-281 (391)
41 3jrp_A Fusion protein of prote 94.4 2.4 8.2E-05 37.8 17.3 202 101-341 70-294 (379)
42 1yfq_A Cell cycle arrest prote 94.3 2.6 8.9E-05 37.1 19.5 199 102-339 71-286 (342)
43 3dwl_C Actin-related protein 2 94.2 0.77 2.6E-05 41.5 13.4 189 108-338 31-239 (377)
44 4aez_A CDC20, WD repeat-contai 94.2 3.3 0.00011 37.8 20.3 191 100-339 103-297 (401)
45 3g4e_A Regucalcin; six bladed 94.1 2.7 9.2E-05 36.7 21.8 201 100-343 24-238 (297)
46 4aow_A Guanine nucleotide-bind 94.0 2.9 9.9E-05 36.7 18.7 98 225-337 237-339 (340)
47 3dsm_A Uncharacterized protein 94.0 3.2 0.00011 37.0 21.1 196 99-339 52-257 (328)
48 2hqs_A Protein TOLB; TOLB, PAL 93.9 4 0.00014 37.8 22.3 186 110-341 203-393 (415)
49 3bws_A Protein LP49; two-domai 93.8 3.9 0.00013 37.5 22.2 192 98-341 178-396 (433)
50 1q7f_A NHL, brain tumor CG1071 93.7 3 0.0001 35.9 21.8 203 98-343 38-246 (286)
51 3nok_A Glutaminyl cyclase; bet 93.7 1.4 4.9E-05 38.2 13.1 110 209-343 62-173 (268)
52 4e54_B DNA damage-binding prot 93.5 0.75 2.6E-05 42.9 12.3 197 100-338 131-330 (435)
53 3hfq_A Uncharacterized protein 93.4 4 0.00014 36.2 24.9 171 140-342 143-326 (347)
54 2z2n_A Virginiamycin B lyase; 93.2 3.6 0.00012 35.3 21.0 192 95-339 104-299 (299)
55 3vgz_A Uncharacterized protein 93.2 4.2 0.00014 35.9 24.8 204 98-340 98-308 (353)
56 1pby_B Quinohemoprotein amine 93.0 2.8 9.7E-05 36.7 14.9 98 226-343 220-319 (337)
57 4g56_B MGC81050 protein; prote 93.0 2.3 7.7E-05 38.4 14.4 198 98-341 103-307 (357)
58 2iwa_A Glutamine cyclotransfer 92.9 4.3 0.00015 35.2 15.4 111 212-343 32-144 (266)
59 3mkq_A Coatomer beta'-subunit; 92.8 8.8 0.0003 38.6 22.0 191 99-339 65-263 (814)
60 3fm0_A Protein CIAO1; WDR39,SG 92.8 5.1 0.00017 35.7 19.2 185 106-333 34-223 (345)
61 2hqs_A Protein TOLB; TOLB, PAL 92.5 6.5 0.00022 36.3 20.9 187 110-341 159-350 (415)
62 1rwi_B Serine/threonine-protei 92.4 4.5 0.00015 34.2 20.2 188 98-337 75-266 (270)
63 1p22_A F-BOX/WD-repeat protein 92.2 7.2 0.00025 36.0 18.5 188 95-337 178-367 (435)
64 1gxr_A ESG1, transducin-like e 92.0 5.8 0.0002 34.5 20.2 176 106-333 159-335 (337)
65 3m0c_C LDL receptor, low-densi 91.8 12 0.00042 38.0 26.3 178 141-362 474-658 (791)
66 2aq5_A Coronin-1A; WD40 repeat 91.8 7.4 0.00025 35.3 19.8 205 100-342 93-308 (402)
67 4a11_B DNA excision repair pro 91.7 7.2 0.00025 35.0 17.3 102 225-338 267-368 (408)
68 3scy_A Hypothetical bacterial 91.4 7.5 0.00026 34.6 20.1 117 210-341 220-345 (361)
69 1k8k_C P40, ARP2/3 complex 41 91.4 7.4 0.00025 34.5 22.2 197 102-339 22-237 (372)
70 2ovr_B FBW7, F-BOX/WD repeat p 91.1 9.3 0.00032 35.2 24.0 188 95-339 164-352 (445)
71 1rwi_B Serine/threonine-protei 91.1 6.3 0.00022 33.3 15.7 193 95-340 29-227 (270)
72 3q7m_A Lipoprotein YFGL, BAMB; 91.0 8.4 0.00029 34.6 21.7 196 95-340 98-301 (376)
73 3bg1_A Protein SEC13 homolog; 90.8 5.8 0.0002 34.8 14.2 56 272-335 188-247 (316)
74 4gga_A P55CDC, cell division c 90.8 9.7 0.00033 34.9 20.3 199 98-340 114-315 (420)
75 1k8k_C P40, ARP2/3 complex 41 90.6 8.7 0.0003 34.0 17.4 142 167-334 29-172 (372)
76 1r5m_A SIR4-interacting protei 90.5 9.5 0.00033 34.4 18.6 194 98-335 215-425 (425)
77 3no2_A Uncharacterized protein 90.0 8.8 0.0003 33.2 14.8 191 101-339 6-199 (276)
78 4aez_A CDC20, WD repeat-contai 89.9 11 0.00038 34.2 22.5 99 224-339 283-384 (401)
79 3mmy_A MRNA export factor; mRN 89.9 9.8 0.00033 33.5 20.2 202 100-339 97-308 (368)
80 3vl1_A 26S proteasome regulato 89.7 11 0.00039 34.0 23.5 197 99-342 107-331 (420)
81 3v7d_B Cell division control p 89.5 13 0.00044 34.4 22.7 199 95-339 127-345 (464)
82 3scy_A Hypothetical bacterial 89.5 11 0.00037 33.5 19.9 77 261-341 165-248 (361)
83 1ri6_A Putative isomerase YBHE 89.2 11 0.00036 32.9 22.9 119 211-342 188-317 (343)
84 1got_B GT-beta; complex (GTP-b 89.2 11 0.00039 33.2 21.8 189 100-338 66-260 (340)
85 2bkl_A Prolyl endopeptidase; m 89.0 19 0.00066 35.6 23.4 193 111-342 203-404 (695)
86 1ri6_A Putative isomerase YBHE 88.9 11 0.00038 32.8 21.7 109 225-341 151-270 (343)
87 1pgu_A Actin interacting prote 88.8 17 0.00058 34.8 18.5 71 261-340 171-243 (615)
88 2dg1_A DRP35, lactonase; beta 88.7 12 0.0004 32.8 21.4 208 98-343 53-271 (333)
89 3vgz_A Uncharacterized protein 88.3 13 0.00043 32.7 19.2 148 167-341 68-221 (353)
90 3zwl_B Eukaryotic translation 88.2 13 0.00044 32.7 22.1 70 261-341 186-255 (369)
91 3sjl_D Methylamine dehydrogena 88.1 11 0.00038 34.5 14.0 115 210-339 236-367 (386)
92 3bg1_A Protein SEC13 homolog; 87.8 13 0.00046 32.4 17.3 72 263-342 229-301 (316)
93 3v65_B Low-density lipoprotein 87.7 16 0.00055 33.3 21.1 193 100-341 87-283 (386)
94 2ojh_A Uncharacterized protein 87.7 12 0.0004 31.6 19.8 185 109-341 21-212 (297)
95 4a11_B DNA excision repair pro 87.3 16 0.00054 32.7 17.9 203 102-338 58-279 (408)
96 3u4y_A Uncharacterized protein 87.1 14 0.00049 32.0 18.8 190 111-341 109-310 (331)
97 3e5z_A Putative gluconolactona 87.0 14 0.00048 31.8 16.2 197 95-340 74-291 (296)
98 1sq9_A Antiviral protein SKI8; 87.0 16 0.00056 32.6 17.8 118 211-337 244-397 (397)
99 3i2n_A WD repeat-containing pr 86.9 15 0.00052 32.1 21.5 197 102-337 131-355 (357)
100 2pm9_A Protein WEB1, protein t 86.9 14 0.00049 33.2 14.3 200 101-337 127-339 (416)
101 3q7m_A Lipoprotein YFGL, BAMB; 86.6 17 0.0006 32.5 21.9 111 99-239 52-169 (376)
102 3dwl_C Actin-related protein 2 86.5 1.5 5E-05 39.6 7.1 141 168-336 33-178 (377)
103 1npe_A Nidogen, entactin; glyc 86.3 14 0.00049 31.2 18.5 161 140-341 38-204 (267)
104 4g56_B MGC81050 protein; prote 86.1 18 0.00063 32.2 18.0 189 98-336 148-344 (357)
105 3e5z_A Putative gluconolactona 86.0 16 0.00054 31.4 23.7 197 102-343 42-254 (296)
106 1q7f_A NHL, brain tumor CG1071 85.9 15 0.00052 31.2 21.4 190 98-335 86-280 (286)
107 4ery_A WD repeat-containing pr 85.9 16 0.00056 31.5 22.1 189 103-340 38-228 (312)
108 3vl1_A 26S proteasome regulato 85.8 20 0.00068 32.4 19.4 101 225-335 313-419 (420)
109 1erj_A Transcriptional repress 85.2 21 0.00073 32.2 22.2 202 98-339 132-345 (393)
110 3azo_A Aminopeptidase; POP fam 84.6 31 0.0011 33.6 20.6 196 110-341 161-375 (662)
111 1sq9_A Antiviral protein SKI8; 84.6 22 0.00074 31.8 21.4 71 261-339 197-271 (397)
112 2z2n_A Virginiamycin B lyase; 84.6 18 0.00061 30.7 21.2 196 95-343 20-220 (299)
113 2mad_H Methylamine dehydrogena 84.4 22 0.00076 32.2 14.1 71 261-341 278-356 (373)
114 3ow8_A WD repeat-containing pr 84.1 21 0.00072 31.2 19.6 182 107-339 99-283 (321)
115 2ynn_A Coatomer subunit beta'; 83.9 20 0.0007 30.9 21.4 190 102-341 69-265 (304)
116 1npe_A Nidogen, entactin; glyc 83.8 19 0.00064 30.5 24.9 190 99-339 46-242 (267)
117 3v64_C Agrin; beta propeller, 83.6 24 0.00083 31.6 21.1 191 100-341 44-240 (349)
118 1jmx_B Amine dehydrogenase; ox 83.5 22 0.00074 31.0 18.0 36 308-343 298-334 (349)
119 1nir_A Nitrite reductase; hemo 83.4 33 0.0011 32.9 21.0 198 99-341 147-361 (543)
120 2pbi_B Guanine nucleotide-bind 83.4 24 0.00082 31.4 20.2 183 102-332 168-354 (354)
121 3bws_A Protein LP49; two-domai 83.3 26 0.0009 31.7 22.3 188 102-335 225-432 (433)
122 2pm7_B Protein transport prote 83.3 21 0.00073 30.7 20.3 67 262-336 170-239 (297)
123 1vyh_C Platelet-activating fac 83.1 27 0.00093 31.8 21.1 64 262-337 308-371 (410)
124 1n7d_A LDL receptor, low-densi 82.8 13 0.00045 37.1 12.7 128 211-360 507-638 (699)
125 3p5b_L Low density lipoprotein 82.7 29 0.00098 31.8 27.4 212 99-362 122-346 (400)
126 2z3z_A Dipeptidyl aminopeptida 82.7 38 0.0013 33.2 18.0 153 167-341 234-397 (706)
127 2vdu_B TRNA (guanine-N(7)-)-me 82.6 30 0.001 31.9 23.7 66 262-339 210-275 (450)
128 3mkq_A Coatomer beta'-subunit; 82.4 42 0.0014 33.5 22.2 187 102-339 27-221 (814)
129 3hrp_A Uncharacterized protein 82.3 30 0.001 31.7 21.3 204 95-341 136-360 (409)
130 3o4h_A Acylamino-acid-releasin 81.8 37 0.0013 32.5 16.3 189 100-335 122-315 (582)
131 3hrp_A Uncharacterized protein 81.4 20 0.00068 33.0 12.6 114 210-341 140-255 (409)
132 1got_B GT-beta; complex (GTP-b 80.6 29 0.001 30.5 20.3 183 100-332 154-340 (340)
133 3jro_A Fusion protein of prote 80.1 51 0.0017 32.9 17.5 141 167-336 30-190 (753)
134 2pm7_B Protein transport prote 80.0 28 0.00095 29.9 17.8 72 263-341 220-292 (297)
135 2aq5_A Coronin-1A; WD40 repeat 79.7 34 0.0012 30.7 20.9 199 102-343 146-350 (402)
136 3odt_A Protein DOA1; ubiquitin 79.1 29 0.00099 29.5 22.8 191 98-339 27-218 (313)
137 2xyi_A Probable histone-bindin 79.0 39 0.0013 30.9 15.3 200 102-339 196-414 (430)
138 3iz6_a 40S ribosomal protein R 78.9 36 0.0012 30.5 19.8 200 102-337 172-377 (380)
139 2qc5_A Streptogramin B lactona 78.9 29 0.00098 29.4 21.5 196 95-343 67-267 (300)
140 3nok_A Glutaminyl cyclase; bet 78.9 31 0.0011 29.7 16.2 182 98-325 62-255 (268)
141 3v65_B Low-density lipoprotein 77.9 40 0.0014 30.5 24.8 211 98-362 125-344 (386)
142 1nir_A Nitrite reductase; hemo 77.5 51 0.0018 31.5 17.4 119 211-339 334-462 (543)
143 3c75_H MADH, methylamine dehyd 77.2 46 0.0016 30.8 13.9 70 260-339 329-406 (426)
144 4ery_A WD repeat-containing pr 76.7 35 0.0012 29.2 21.1 190 102-340 79-273 (312)
145 2dg1_A DRP35, lactonase; beta 76.6 33 0.0011 29.8 12.2 115 210-341 54-177 (333)
146 3fm0_A Protein CIAO1; WDR39,SG 76.2 40 0.0014 29.6 19.4 102 225-340 83-186 (345)
147 1r5m_A SIR4-interacting protei 76.0 43 0.0015 29.8 22.5 97 225-341 227-325 (425)
148 3fvz_A Peptidyl-glycine alpha- 75.9 40 0.0014 29.5 18.2 195 111-341 70-283 (329)
149 1jmx_B Amine dehydrogenase; ox 75.5 27 0.00093 30.3 11.4 113 210-337 9-136 (349)
150 3frx_A Guanine nucleotide-bind 75.5 40 0.0014 29.3 17.7 96 225-339 129-231 (319)
151 4gqb_B Methylosome protein 50; 75.4 43 0.0015 29.6 16.4 191 98-338 136-334 (344)
152 3k26_A Polycomb protein EED; W 75.4 41 0.0014 29.3 21.2 68 262-335 299-366 (366)
153 1yfq_A Cell cycle arrest prote 75.1 40 0.0014 29.1 18.1 183 102-336 25-226 (342)
154 1pjx_A Dfpase, DIISOPROPYLFLUO 74.8 39 0.0013 28.8 23.6 197 108-342 44-264 (314)
155 2qc5_A Streptogramin B lactona 74.6 38 0.0013 28.6 20.8 195 95-342 25-224 (300)
156 3sfz_A APAF-1, apoptotic pepti 74.6 92 0.0031 33.0 19.7 197 102-339 671-875 (1249)
157 4a0p_A LRP6, LRP-6, low-densit 74.3 68 0.0023 31.4 28.6 249 55-361 6-262 (628)
158 2iwa_A Glutamine cyclotransfer 73.8 43 0.0015 28.8 22.1 194 100-336 31-238 (266)
159 1pgu_A Actin interacting prote 73.7 63 0.0021 30.7 19.5 106 211-336 499-615 (615)
160 4h5i_A Guanine nucleotide-exch 73.5 50 0.0017 29.4 19.4 195 98-336 142-344 (365)
161 3k26_A Polycomb protein EED; W 72.9 47 0.0016 28.9 17.7 198 102-337 87-320 (366)
162 3iuj_A Prolyl endopeptidase; h 72.7 77 0.0026 31.3 19.4 116 210-342 290-412 (693)
163 3lrv_A PRE-mRNA-splicing facto 72.6 49 0.0017 28.9 20.7 205 94-340 88-299 (343)
164 2pm9_A Protein WEB1, protein t 70.5 59 0.002 29.0 15.2 68 262-336 178-250 (416)
165 3dr2_A Exported gluconolactona 70.3 52 0.0018 28.3 17.9 196 103-343 59-275 (305)
166 2fp8_A Strictosidine synthase; 68.8 44 0.0015 29.0 11.0 53 225-281 260-312 (322)
167 2p4o_A Hypothetical protein; p 68.8 57 0.0019 28.1 14.3 107 210-337 41-149 (306)
168 3i2n_A WD repeat-containing pr 68.7 57 0.002 28.2 23.1 108 211-336 179-292 (357)
169 1erj_A Transcriptional repress 68.5 66 0.0023 28.8 20.7 97 225-336 187-288 (393)
170 3dm0_A Maltose-binding peripla 68.4 93 0.0032 30.5 21.5 186 108-334 492-692 (694)
171 3g4e_A Regucalcin; six bladed 68.4 56 0.0019 28.0 19.0 158 141-339 16-186 (297)
172 3iz6_a 40S ribosomal protein R 68.4 65 0.0022 28.7 16.6 72 261-339 260-333 (380)
173 3mmy_A MRNA export factor; mRN 67.7 44 0.0015 29.0 10.9 70 262-341 54-123 (368)
174 3vu4_A KMHSV2; beta-propeller 67.6 65 0.0022 28.4 20.6 67 261-337 206-273 (355)
175 2ad6_A Methanol dehydrogenase 67.3 64 0.0022 31.1 12.6 121 205-340 56-190 (571)
176 3sfz_A APAF-1, apoptotic pepti 67.0 1.3E+02 0.0045 31.7 24.9 195 98-341 624-834 (1249)
177 1ddw_A GLGF-domain protein hom 66.9 12 0.00042 27.8 5.7 41 109-158 10-51 (120)
178 4aow_A Guanine nucleotide-bind 66.8 61 0.0021 27.8 19.4 63 266-339 188-250 (340)
179 3v64_C Agrin; beta propeller, 66.3 71 0.0024 28.4 24.7 211 98-362 82-301 (349)
180 3v9f_A Two-component system se 65.7 1.1E+02 0.0039 30.5 19.8 194 99-336 459-657 (781)
181 3ow8_A WD repeat-containing pr 65.7 67 0.0023 27.9 20.5 90 225-333 228-319 (321)
182 1ijq_A LDL receptor, low-densi 65.7 68 0.0023 27.9 23.5 183 109-341 9-201 (316)
183 2oiz_A Aromatic amine dehydrog 64.4 78 0.0027 28.1 13.0 69 261-341 265-340 (361)
184 3m0c_C LDL receptor, low-densi 63.2 1.3E+02 0.0045 30.4 22.5 111 210-342 481-596 (791)
185 1ijq_A LDL receptor, low-densi 62.9 77 0.0026 27.6 27.4 212 98-362 39-264 (316)
186 1qks_A Cytochrome CD1 nitrite 62.5 1.1E+02 0.0039 29.4 22.3 198 100-341 166-379 (567)
187 2qe8_A Uncharacterized protein 61.5 59 0.002 28.6 10.5 74 207-281 71-153 (343)
188 3odt_A Protein DOA1; ubiquitin 61.1 74 0.0025 26.8 20.4 95 225-340 205-301 (313)
189 3p5b_L Low density lipoprotein 60.9 98 0.0033 28.1 20.1 112 210-341 169-283 (400)
190 1kb0_A Quinohemoprotein alcoho 60.9 48 0.0016 32.8 10.5 122 205-340 71-204 (677)
191 1evh_A WH1 domain, protein (ME 60.3 21 0.00073 26.1 5.9 43 109-158 10-52 (112)
192 1pby_B Quinohemoprotein amine 59.3 83 0.0028 26.8 16.4 111 211-340 44-168 (337)
193 3hxj_A Pyrrolo-quinoline quino 59.2 85 0.0029 26.8 11.1 29 211-243 147-175 (330)
194 3nol_A Glutamine cyclotransfer 58.5 87 0.003 26.8 22.5 182 100-325 52-245 (262)
195 4ggc_A P55CDC, cell division c 57.9 85 0.0029 26.5 20.6 67 98-179 34-100 (318)
196 3no2_A Uncharacterized protein 57.8 88 0.003 26.6 16.7 120 208-343 44-163 (276)
197 4a2l_A BT_4663, two-component 57.6 1.6E+02 0.0054 29.5 24.7 202 99-341 366-577 (795)
198 3ei3_B DNA damage-binding prot 56.7 1E+02 0.0035 27.1 20.3 156 140-335 76-236 (383)
199 1yr2_A Prolyl oligopeptidase; 56.5 1.6E+02 0.0054 29.2 25.0 145 167-341 293-447 (741)
200 2oaj_A Protein SNI1; WD40 repe 56.2 1.8E+02 0.0062 29.7 21.3 193 102-339 31-246 (902)
201 4a2l_A BT_4663, two-component 56.0 1.7E+02 0.0057 29.3 24.9 215 95-341 220-442 (795)
202 3zwl_B Eukaryotic translation 55.9 99 0.0034 26.6 23.7 97 225-341 197-310 (369)
203 4hw6_A Hypothetical protein, I 55.5 1.3E+02 0.0044 27.7 11.9 115 204-338 140-262 (433)
204 2ecf_A Dipeptidyl peptidase IV 55.5 1.6E+02 0.0054 28.9 19.1 192 111-340 264-464 (741)
205 2p4o_A Hypothetical protein; p 55.5 1E+02 0.0034 26.5 23.7 197 99-341 41-247 (306)
206 3tc9_A Hypothetical hydrolase; 54.6 1.3E+02 0.0045 27.6 14.1 110 211-341 149-263 (430)
207 1yiq_A Quinohemoprotein alcoho 54.4 1.1E+02 0.0036 30.3 11.8 123 205-340 64-197 (689)
208 1kv9_A Type II quinohemoprotei 54.4 1.5E+02 0.0051 29.1 12.8 121 205-340 60-192 (668)
209 1i2h_A PSD-ZIP45(homer-1C/VESL 54.3 24 0.00081 28.0 5.5 40 110-158 16-56 (168)
210 1vyh_C Platelet-activating fac 53.9 1.2E+02 0.0043 27.2 23.7 139 102-281 122-264 (410)
211 3sov_A LRP-6, low-density lipo 53.8 1.1E+02 0.0039 26.7 19.7 112 210-341 89-203 (318)
212 2z3z_A Dipeptidyl aminopeptida 53.6 1.7E+02 0.0057 28.5 23.8 194 110-338 235-438 (706)
213 1flg_A Protein (quinoprotein e 53.5 1.4E+02 0.0047 28.8 12.2 125 205-341 62-199 (582)
214 1pjx_A Dfpase, DIISOPROPYLFLUO 53.5 1E+02 0.0035 26.1 12.3 116 210-341 27-167 (314)
215 3f3f_A Nucleoporin SEH1; struc 53.4 1E+02 0.0035 26.1 23.5 36 307-342 309-345 (351)
216 2vdu_B TRNA (guanine-N(7)-)-me 52.5 1.4E+02 0.0047 27.2 23.7 205 102-339 163-397 (450)
217 1kb0_A Quinohemoprotein alcoho 51.6 1.9E+02 0.0064 28.5 19.3 122 99-241 76-208 (677)
218 2hes_X YDR267CP; beta-propelle 51.5 1.2E+02 0.0041 26.2 20.2 72 265-341 213-286 (330)
219 2fp8_A Strictosidine synthase; 51.1 1.2E+02 0.0041 26.1 20.1 198 103-343 33-277 (322)
220 2ymu_A WD-40 repeat protein; u 50.9 1.6E+02 0.0055 27.6 24.2 97 225-341 407-504 (577)
221 2ynn_A Coatomer subunit beta'; 50.7 1.2E+02 0.004 25.9 19.2 68 261-339 152-221 (304)
222 3amr_A 3-phytase; beta-propell 50.6 1.4E+02 0.0048 26.8 22.0 210 98-343 38-273 (355)
223 3fvz_A Peptidyl-glycine alpha- 49.6 1.3E+02 0.0044 26.1 17.6 164 100-282 154-322 (329)
224 1nr0_A Actin interacting prote 49.3 1.8E+02 0.0063 27.8 18.6 67 261-338 158-224 (611)
225 4e54_B DNA damage-binding prot 48.2 1.6E+02 0.0054 26.7 14.8 157 140-336 122-283 (435)
226 3gre_A Serine/threonine-protei 47.7 1.6E+02 0.0053 26.5 19.3 102 224-341 191-298 (437)
227 2ghs_A AGR_C_1268P; regucalcin 47.4 1.4E+02 0.0048 25.8 14.8 107 211-341 60-174 (326)
228 2kwv_A RAD30 homolog B, DNA po 47.2 9.4 0.00032 22.8 1.6 17 3-19 22-38 (48)
229 2xzm_R RACK1; ribosome, transl 46.0 1.5E+02 0.005 25.7 17.6 30 307-336 312-341 (343)
230 4h5i_A Guanine nucleotide-exch 43.8 1.7E+02 0.0058 25.8 16.8 33 307-339 272-304 (365)
231 1egx_A VAsp, vasodilator-stimu 43.8 43 0.0015 24.6 5.2 43 110-158 11-53 (115)
232 4gq1_A NUP37; propeller, trans 43.7 1.8E+02 0.006 25.9 11.8 67 261-339 155-222 (393)
233 3dr2_A Exported gluconolactona 43.1 1.5E+02 0.0053 25.1 12.6 110 110-245 169-278 (305)
234 2j04_A TAU60, YPL007P, hypothe 42.8 77 0.0026 30.8 8.2 67 261-337 96-162 (588)
235 1xfd_A DIP, dipeptidyl aminope 42.3 2.5E+02 0.0085 27.3 16.5 34 308-341 258-295 (723)
236 3o4h_A Acylamino-acid-releasin 40.0 2.4E+02 0.0084 26.5 23.0 111 207-339 116-231 (582)
237 3iuj_A Prolyl endopeptidase; h 40.0 2.8E+02 0.0095 27.1 14.1 103 225-343 259-367 (693)
238 1yiq_A Quinohemoprotein alcoho 39.3 2.9E+02 0.0099 27.2 15.2 30 207-240 117-148 (689)
239 3dw8_B Serine/threonine-protei 39.1 93 0.0032 28.0 8.2 73 261-338 188-261 (447)
240 2pbi_B Guanine nucleotide-bind 38.8 2E+02 0.0068 25.1 20.5 97 225-338 176-274 (354)
241 3mbr_X Glutamine cyclotransfer 38.8 1.8E+02 0.006 24.5 22.3 183 99-325 29-224 (243)
242 3sov_A LRP-6, low-density lipo 38.6 2E+02 0.0068 25.0 24.6 209 100-362 46-264 (318)
243 4a0p_A LRP6, LRP-6, low-densit 38.5 2.9E+02 0.0098 26.9 25.8 189 102-341 8-203 (628)
244 2xyi_A Probable histone-bindin 38.2 2.2E+02 0.0076 25.6 12.2 67 261-336 243-310 (430)
245 3vu4_A KMHSV2; beta-propeller 38.2 2E+02 0.0069 25.1 18.3 33 307-339 198-231 (355)
246 3v9f_A Two-component system se 37.6 3.2E+02 0.011 27.1 23.5 211 100-341 127-348 (781)
247 3dm0_A Maltose-binding peripla 37.0 3E+02 0.01 26.7 21.2 96 225-340 541-637 (694)
248 2hes_X YDR267CP; beta-propelle 37.0 2E+02 0.0069 24.7 21.1 71 257-335 256-328 (330)
249 1n7d_A LDL receptor, low-densi 35.3 3.4E+02 0.012 26.8 11.9 57 206-270 543-603 (699)
250 1mda_H Methylamine dehydrogena 34.2 2.4E+02 0.0083 25.2 9.8 46 288-339 303-350 (368)
251 3azo_A Aminopeptidase; POP fam 34.0 3.2E+02 0.011 26.1 18.4 145 110-282 217-367 (662)
252 3pe7_A Oligogalacturonate lyas 33.8 88 0.003 27.5 6.9 31 311-341 87-117 (388)
253 2hz6_A Endoplasmic reticulum t 33.7 7.3 0.00025 35.3 -0.5 113 205-340 3-116 (369)
254 3ott_A Two-component system se 33.7 3.6E+02 0.012 26.6 12.9 146 93-276 475-623 (758)
255 1kv9_A Type II quinohemoprotei 33.6 3.5E+02 0.012 26.4 16.5 29 207-239 113-143 (668)
256 2oaj_A Protein SNI1; WD40 repe 31.6 4.3E+02 0.015 26.9 14.8 97 225-341 39-135 (902)
257 3frx_A Guanine nucleotide-bind 31.2 2.5E+02 0.0084 23.9 22.1 94 225-338 176-270 (319)
258 3sre_A PON1, serum paraoxonase 30.7 2.9E+02 0.0099 24.6 16.2 197 100-334 60-297 (355)
259 3kvp_A Uncharacterized protein 30.7 50 0.0017 21.5 3.1 15 327-341 41-55 (72)
260 2ghs_A AGR_C_1268P; regucalcin 30.1 2.6E+02 0.0091 24.0 23.2 199 100-343 60-268 (326)
261 3s94_A LRP-6, low-density lipo 30.1 3.9E+02 0.013 25.9 23.9 161 139-341 350-516 (619)
262 2xzh_A Clathrin heavy chain 1; 29.0 1.9E+02 0.0066 25.9 7.8 46 310-357 265-311 (365)
263 2dk7_A Transcription elongatio 28.8 49 0.0017 22.0 3.0 20 319-338 23-42 (73)
264 2ymu_A WD-40 repeat protein; u 27.8 3.7E+02 0.013 24.9 24.0 97 225-341 448-545 (577)
265 4gga_A P55CDC, cell division c 27.4 3.3E+02 0.011 24.2 21.1 66 261-338 288-356 (420)
266 1flg_A Protein (quinoprotein e 26.6 3.7E+02 0.013 25.7 10.3 55 208-271 494-549 (582)
267 2be1_A Serine/threonine-protei 26.6 1.3E+02 0.0045 26.8 6.5 117 100-237 10-133 (339)
268 3dw8_B Serine/threonine-protei 25.8 3.5E+02 0.012 24.0 18.6 107 224-335 197-315 (447)
269 2xdw_A Prolyl endopeptidase; a 25.7 4.7E+02 0.016 25.4 26.0 146 167-341 258-422 (710)
270 1w6s_A Methanol dehydrogenase 25.3 4E+02 0.014 25.7 10.3 80 169-271 454-536 (599)
271 4ggc_A P55CDC, cell division c 25.3 2.9E+02 0.01 22.9 16.8 138 168-337 45-183 (318)
272 4hw6_A Hypothetical protein, I 23.7 4.2E+02 0.014 24.1 18.0 108 100-237 152-262 (433)
273 1k32_A Tricorn protease; prote 23.4 6.2E+02 0.021 26.0 19.5 98 225-341 358-467 (1045)
274 3amr_A 3-phytase; beta-propell 22.9 4.1E+02 0.014 23.7 20.1 101 225-334 99-209 (355)
275 3pe7_A Oligogalacturonate lyas 22.8 3.7E+02 0.013 23.2 20.0 213 102-343 94-337 (388)
276 3lrv_A PRE-mRNA-splicing facto 22.8 3.6E+02 0.012 23.0 19.1 154 100-291 138-299 (343)
277 2qe8_A Uncharacterized protein 21.9 3.9E+02 0.013 23.1 9.2 121 211-341 27-160 (343)
278 2oit_A Nucleoporin 214KDA; NH2 21.9 2.7E+02 0.0093 25.3 8.1 68 262-341 162-229 (434)
279 1nr0_A Actin interacting prote 21.8 5.2E+02 0.018 24.5 21.0 64 261-335 459-522 (611)
280 2ecf_A Dipeptidyl peptidase IV 21.7 5.5E+02 0.019 24.8 23.7 103 226-336 264-370 (741)
281 3c5m_A Oligogalacturonate lyas 21.4 1.8E+02 0.006 25.4 6.5 32 310-341 86-117 (396)
282 1mda_H Methylamine dehydrogena 21.2 2.4E+02 0.0081 25.3 7.3 69 263-343 33-114 (368)
283 3gre_A Serine/threonine-protei 21.0 4.3E+02 0.015 23.3 18.8 31 308-339 333-363 (437)
284 1bpo_A Protein (clathrin); cla 20.5 2.9E+02 0.0099 25.9 7.5 49 306-356 260-309 (494)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.47 E-value=4e-11 Score=109.68 Aligned_cols=194 Identities=11% Similarity=0.030 Sum_probs=126.7
Q ss_pred eEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeec--CCCCccEEEEEEeCCCCeEEccccCc
Q 046902 111 ELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKG--NDGDDVEVEVYSLKTNSWRRISNLPR 188 (393)
Q Consensus 111 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~--~~~~~~~~~Vyss~t~~W~~~~~~p~ 188 (393)
.++++||.|++|..+|+++ ... .....+. . . =+|+.++.... .......+++|+..+++|+.++.+|.
T Consensus 68 ~~~~~d~~~~~W~~~~~~p--~~r-~~~~~~~---~--~--~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 137 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLP--SPR-CLFGLGE---A--L--NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY 137 (315)
T ss_dssp EEEEEETTTTEEEECCCBS--SCE-ESCEEEE---E--T--TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS
T ss_pred ceEEecCCCCeEEECCCCC--cch-hceeEEE---E--C--CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC
Confidence 4899999999999999877 211 1111211 1 1 15666554331 22345679999999999999987772
Q ss_pred ccccccccccccccccCceeEeCceEEEeccC-C--CCCcEEEEEECCCceeeeec-CCCcccccCCceeEEEEEeCCeE
Q 046902 189 FLRDFYDYLYHSLFRKGYGVLAGGALHWVSPK-S--STRSVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVGSLEGCL 264 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~-~--~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~~~~G~L 264 (393)
.+.....+.++|.+|.+++. . .....+.+||+.+.+|+.++ +|.... ....+..+|+|
T Consensus 138 ------------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~------~~~~~~~~~~i 199 (315)
T 4asc_A 138 ------------VVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARS------LFGATVHDGRI 199 (315)
T ss_dssp ------------CCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCB------SCEEEEETTEE
T ss_pred ------------cccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchh------ceEEEEECCEE
Confidence 23455678899999999865 1 12357999999999999984 554332 23567789999
Q ss_pred EEEEEcCCC--eEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC--------------cEE
Q 046902 265 CVFRFYNLV--YVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR--------------EKL 328 (393)
Q Consensus 265 ~~~~~~~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~--------------~~l 328 (393)
++++..... .-++|+++-. ...|+.+..++... ....+.+. ++.++++.... ..+
T Consensus 200 yv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r------~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~v 270 (315)
T 4asc_A 200 IVAAGVTDTGLTSSAEVYSIT--DNKWAPFEAFPQER------SSLSLVSL-VGTLYAIGGFATLETESGELVPTELNDI 270 (315)
T ss_dssp EEEEEECSSSEEEEEEEEETT--TTEEEEECCCSSCC------BSCEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEEeccCCCCccceEEEEECC--CCeEEECCCCCCcc------cceeEEEE-CCEEEEECCccccCcCCccccccccCcE
Confidence 999876433 3468888742 46899876443321 11122222 44434443211 248
Q ss_pred EEEECCCCcEEEE
Q 046902 329 VWFDLETNSLRTV 341 (393)
Q Consensus 329 ~~yd~~t~~~~~v 341 (393)
..||+++++|+.+
T Consensus 271 ~~yd~~~~~W~~~ 283 (315)
T 4asc_A 271 WRYNEEEKKWEGV 283 (315)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEecCCCChhhhh
Confidence 8999999999998
No 2
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.44 E-value=1.4e-10 Score=106.12 Aligned_cols=192 Identities=11% Similarity=0.100 Sum_probs=125.8
Q ss_pred EEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeec-CCCCccEEEEEEeCCCCeEEccccCccc
Q 046902 112 LALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKG-NDGDDVEVEVYSLKTNSWRRISNLPRFL 190 (393)
Q Consensus 112 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~-~~~~~~~~~Vyss~t~~W~~~~~~p~~~ 190 (393)
++++||.|++|..+|+++ ... .......+ + =+|+.++.... .......+++|++.+++|+.++.+|.
T Consensus 80 ~~~~d~~~~~W~~~~~~p--~~r-~~~~~~~~--~-----~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-- 147 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLP--SAR-CLFGLGEV--D-----DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI-- 147 (318)
T ss_dssp EEEEETTTTEEEECSCBS--SCB-CSCEEEEE--T-----TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS--
T ss_pred EEEEeCCCCcEEECCCCC--ccc-cccceEEE--C-----CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC--
Confidence 889999999999999877 221 12222221 1 25666655432 22234679999999999999987772
Q ss_pred ccccccccccccccCceeEeCceEEEeccCC---CCCcEEEEEECCCceeeeec-CCCcccccCCceeEEEEEeCCeEEE
Q 046902 191 RDFYDYLYHSLFRKGYGVLAGGALHWVSPKS---STRSVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVGSLEGCLCV 266 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~---~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~~~~G~L~~ 266 (393)
.+.....+.++|.+|.+++.. .....+..||+.+++|+.++ +|.... ...++..+|+|++
T Consensus 148 ----------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~------~~~~~~~~~~iyv 211 (318)
T 2woz_A 148 ----------KVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRS------MFGVAIHKGKIVI 211 (318)
T ss_dssp ----------CEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCB------SCEEEEETTEEEE
T ss_pred ----------cccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcc------cceEEEECCEEEE
Confidence 224455678999999998641 12356999999999999984 443322 2356778999999
Q ss_pred EEEcCCC--eEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-c--------------CcEEE
Q 046902 267 FRFYNLV--YVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-R--------------REKLV 329 (393)
Q Consensus 267 ~~~~~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~--------------~~~l~ 329 (393)
++..... .-++|+++-. ...|+++..++... ....+.+ -++ .|++.. . ...+.
T Consensus 212 ~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r------~~~~~~~-~~~-~i~v~GG~~~~~~~~~~~~~~~~~~v~ 281 (318)
T 2woz_A 212 AGGVTEDGLSASVEAFDLK--TNKWEVMTEFPQER------SSISLVS-LAG-SLYAIGGFAMIQLESKEFAPTEVNDIW 281 (318)
T ss_dssp EEEEETTEEEEEEEEEETT--TCCEEECCCCSSCC------BSCEEEE-ETT-EEEEECCBCCBC----CCBCCBCCCEE
T ss_pred EcCcCCCCccceEEEEECC--CCeEEECCCCCCcc------cceEEEE-ECC-EEEEECCeeccCCCCceeccceeeeEE
Confidence 9875432 3467877642 46799875444321 1112222 244 455432 1 13599
Q ss_pred EEECCCCcEEEE
Q 046902 330 WFDLETNSLRTV 341 (393)
Q Consensus 330 ~yd~~t~~~~~v 341 (393)
.||+++++|+.+
T Consensus 282 ~yd~~~~~W~~~ 293 (318)
T 2woz_A 282 KYEDDKKEWAGM 293 (318)
T ss_dssp EEETTTTEEEEE
T ss_pred EEeCCCCEehhh
Confidence 999999999998
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.43 E-value=2.3e-11 Score=110.71 Aligned_cols=210 Identities=10% Similarity=0.047 Sum_probs=133.5
Q ss_pred eeeeeceEEEee-----CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEE
Q 046902 96 LGSCNGLIALCN-----SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEV 170 (393)
Q Consensus 96 ~~s~~GLl~~~~-----~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~ 170 (393)
++..+|.|++.. ....+.++||.|++|..+|+++ ... .....+. ++ -+|+.++...........+
T Consensus 51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r-~~~~~~~--~~-----~~iyv~GG~~~~~~~~~~~ 120 (306)
T 3ii7_A 51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP--TPR-DSLAACA--AE-----GKIYTSGGSEVGNSALYLF 120 (306)
T ss_dssp EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS--SCC-BSCEEEE--ET-----TEEEEECCBBTTBSCCCCE
T ss_pred EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC--ccc-cceeEEE--EC-----CEEEEECCCCCCCcEeeeE
Confidence 334566555443 2357999999999999999877 221 1222222 11 2566655433222244679
Q ss_pred EEEEeCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCC--CC----CcEEEEEECCCceeeeec-CC
Q 046902 171 EVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS--ST----RSVIVAFDLVAEEFYQLP-LP 243 (393)
Q Consensus 171 ~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~--~~----~~~il~fD~~~e~~~~i~-lP 243 (393)
++|++.+++|+.++.+|. .+.....+.++|.+|.+++.. .. ...+.+||+.+++|+.++ +|
T Consensus 121 ~~~d~~~~~W~~~~~~p~------------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p 188 (306)
T 3ii7_A 121 ECYDTRTESWHTKPSMLT------------QRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMI 188 (306)
T ss_dssp EEEETTTTEEEEECCCSS------------CCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCS
T ss_pred EEEeCCCCceEeCCCCcC------------CcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCcc
Confidence 999999999999987772 224455678999999998641 11 467999999999999984 44
Q ss_pred CcccccCCceeEEEEEeCCeEEEEEEcCCC--eEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEE
Q 046902 244 DSVNVSYANVHVDVGSLEGCLCVFRFYNLV--YVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLL 321 (393)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l 321 (393)
.... ...++..+|+|++++..... .-++|+++-. ...|+.+..++... ......+. ++.++++
T Consensus 189 ~~r~------~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r------~~~~~~~~-~~~i~v~ 253 (306)
T 3ii7_A 189 EARK------NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIK--LNEWKMVSPMPWKG------VTVKCAAV-GSIVYVL 253 (306)
T ss_dssp SCCB------SCEEEEETTEEEEECCEETTEEBCCEEEEETT--TTEEEECCCCSCCB------SCCEEEEE-TTEEEEE
T ss_pred chhh------cceEEEECCEEEEEeCCCCCCCCceEEEeeCC--CCcEEECCCCCCCc------cceeEEEE-CCEEEEE
Confidence 4332 34667789999999765332 2357777742 46799875443321 11122222 4444444
Q ss_pred EEc-----CcEEEEEECCCCcEEEEE
Q 046902 322 EVR-----REKLVWFDLETNSLRTVK 342 (393)
Q Consensus 322 ~~~-----~~~l~~yd~~t~~~~~v~ 342 (393)
... ...+..||+++++|+.+.
T Consensus 254 GG~~~~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 254 AGFQGVGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp ECBCSSSBCCEEEEEETTTTEEEEEE
T ss_pred eCcCCCeeeeeEEEEcCCCCeEEeCC
Confidence 321 136999999999999984
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.39 E-value=9.5e-11 Score=106.41 Aligned_cols=206 Identities=15% Similarity=0.157 Sum_probs=131.9
Q ss_pred eeeeceEEEeeC------CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEE
Q 046902 97 GSCNGLIALCNS------VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEV 170 (393)
Q Consensus 97 ~s~~GLl~~~~~------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~ 170 (393)
+..+|.|++... ...+.++||.|++|..+|+++ ... .....+. ++ + +++.++.... ......+
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r-~~~~~~~--~~---~--~iyv~GG~~~-~~~~~~~ 126 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMR--DRR-STLGAAV--LN---G--LLYAVGGFDG-STGLSSV 126 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCS--SCC-BSCEEEE--ET---T--EEEEEEEECS-SCEEEEE
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCC--ccc-cceEEEE--EC---C--EEEEEcCCCC-CccCceE
Confidence 344665555431 246999999999999999877 221 1222222 11 1 5555554322 1234579
Q ss_pred EEEEeCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCC----CcEEEEEECCCceeeeec-CCCc
Q 046902 171 EVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSST----RSVIVAFDLVAEEFYQLP-LPDS 245 (393)
Q Consensus 171 ~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~----~~~il~fD~~~e~~~~i~-lP~~ 245 (393)
++|++.+++|+.++.+|. .+.....+.++|.+|.+++.... ...+..||+.+++|+.+. +|..
T Consensus 127 ~~~d~~~~~W~~~~~~p~------------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 194 (302)
T 2xn4_A 127 EAYNIKSNEWFHVAPMNT------------RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR 194 (302)
T ss_dssp EEEETTTTEEEEECCCSS------------CCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC
T ss_pred EEEeCCCCeEeecCCCCC------------cccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc
Confidence 999999999999987772 22345567899999999764211 356999999999999984 4443
Q ss_pred ccccCCceeEEEEEeCCeEEEEEEcCCC--eEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE
Q 046902 246 VNVSYANVHVDVGSLEGCLCVFRFYNLV--YVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV 323 (393)
Q Consensus 246 ~~~~~~~~~~~l~~~~G~L~~~~~~~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~ 323 (393)
.. ...++..+|+|++++..... .-++|+++-. ...|+.+..++... ....+.+ -++ .|++..
T Consensus 195 r~------~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~~~~r------~~~~~~~-~~~-~i~v~G 258 (302)
T 2xn4_A 195 RS------GAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPT--TNAWRQVADMNMCR------RNAGVCA-VNG-LLYVVG 258 (302)
T ss_dssp CB------SCEEEEETTEEEEECCBSSSSBCCCEEEEETT--TTEEEEECCCSSCC------BSCEEEE-ETT-EEEEEC
T ss_pred cc------cccEEEECCEEEEECCCCCCcccceEEEEeCC--CCCEeeCCCCCCcc------ccCeEEE-ECC-EEEEEC
Confidence 32 23667889999999865432 3367777742 46799876444321 1112222 244 455542
Q ss_pred c-C-----cEEEEEECCCCcEEEE
Q 046902 324 R-R-----EKLVWFDLETNSLRTV 341 (393)
Q Consensus 324 ~-~-----~~l~~yd~~t~~~~~v 341 (393)
. + ..+..||+++++|+.+
T Consensus 259 G~~~~~~~~~v~~yd~~~~~W~~~ 282 (302)
T 2xn4_A 259 GDDGSCNLASVEYYNPTTDKWTVV 282 (302)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEEC
T ss_pred CcCCCcccccEEEEcCCCCeEEEC
Confidence 1 1 2499999999999987
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.38 E-value=6.6e-11 Score=107.86 Aligned_cols=194 Identities=13% Similarity=0.099 Sum_probs=125.6
Q ss_pred ceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcc
Q 046902 110 QELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRF 189 (393)
Q Consensus 110 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~ 189 (393)
..++++||.|++|..+|+++ ... .....+. ++ =+|+.++..... .....+++|++.+++|+.++.+|.
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p--~~r-~~~~~~~--~~-----~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~- 157 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMS--VPR-NRIGVGV--ID-----GHIYAVGGSHGC-IHHNSVERYEPERDEWHLVAPMLT- 157 (308)
T ss_dssp CCEEEEETTTTEEEECCCCS--SCC-BTCEEEE--ET-----TEEEEECCEETT-EECCCEEEEETTTTEEEECCCCSS-
T ss_pred ceEEEECCCCCeEeECCCCC--cCc-cccEEEE--EC-----CEEEEEcCCCCC-cccccEEEECCCCCeEeECCCCCc-
Confidence 36899999999999999877 221 1222222 11 156555443221 123568999999999999987772
Q ss_pred cccccccccccccccCceeEeCceEEEeccCCC--CCcEEEEEECCCceeeeec-CCCcccccCCceeEEEEEeCCeEEE
Q 046902 190 LRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS--TRSVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVGSLEGCLCV 266 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~~~~G~L~~ 266 (393)
.+.....+.++|.+|.+++... ....+..||+.+++|+.++ +|.... ...++..+|+|++
T Consensus 158 -----------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~------~~~~~~~~~~iyv 220 (308)
T 1zgk_A 158 -----------RRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRS------GAGVCVLHNCIYA 220 (308)
T ss_dssp -----------CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCB------SCEEEEETTEEEE
T ss_pred -----------cccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccc------cceEEEECCEEEE
Confidence 2234556788999999986521 1357999999999999984 443321 2356778999999
Q ss_pred EEEcCCC--eEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc------CcEEEEEECCCCcE
Q 046902 267 FRFYNLV--YVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR------REKLVWFDLETNSL 338 (393)
Q Consensus 267 ~~~~~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~yd~~t~~~ 338 (393)
++..... .-++|+++-. ...|+++..++... ...-+.+ -++ .|++... ...+..||+++++|
T Consensus 221 ~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p~~r------~~~~~~~-~~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 221 AGGYDGQDQLNSVERYDVE--TETWTFVAPMKHRR------SALGITV-HQG-RIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp ECCBCSSSBCCCEEEEETT--TTEEEECCCCSSCC------BSCEEEE-ETT-EEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred EeCCCCCCccceEEEEeCC--CCcEEECCCCCCCc------cceEEEE-ECC-EEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 9865432 3567777742 46799876443321 1112222 244 4555421 23699999999999
Q ss_pred EEEE
Q 046902 339 RTVK 342 (393)
Q Consensus 339 ~~v~ 342 (393)
+.+.
T Consensus 291 ~~~~ 294 (308)
T 1zgk_A 291 SEVT 294 (308)
T ss_dssp EEEE
T ss_pred eecC
Confidence 9984
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.37 E-value=1.7e-10 Score=104.58 Aligned_cols=207 Identities=12% Similarity=0.127 Sum_probs=131.8
Q ss_pred eeeeeceEEEeeC------CceEEEEeccccc---eeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCC
Q 046902 96 LGSCNGLIALCNS------VQELALFNPSTRK---LKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGD 166 (393)
Q Consensus 96 ~~s~~GLl~~~~~------~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~ 166 (393)
.+..+|.|++... ...++++||.|++ |..+|+++ ... .....+. ++ -+|+.++.... ...
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p--~~r-~~~~~~~--~~-----~~lyv~GG~~~-~~~ 126 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMN--VRR-GLAGATT--LG-----DMIYVSGGFDG-SRR 126 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCS--SCC-BSCEEEE--ET-----TEEEEECCBCS-SCB
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCC--CCc-cceeEEE--EC-----CEEEEEcccCC-Ccc
Confidence 3344565554431 2469999999999 99998877 221 1222221 11 25665554322 123
Q ss_pred ccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCC--CCcEEEEEECCCceeeeec-CC
Q 046902 167 DVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS--TRSVIVAFDLVAEEFYQLP-LP 243 (393)
Q Consensus 167 ~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~il~fD~~~e~~~~i~-lP 243 (393)
...+++|++.+++|+.++.+|. .+.....+.++|.+|.+++... ....+.+||+.+.+|+.+. +|
T Consensus 127 ~~~~~~~d~~~~~W~~~~~~p~------------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p 194 (301)
T 2vpj_A 127 HTSMERYDPNIDQWSMLGDMQT------------AREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMA 194 (301)
T ss_dssp CCEEEEEETTTTEEEEEEECSS------------CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCS
T ss_pred cceEEEEcCCCCeEEECCCCCC------------CcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCC
Confidence 4579999999999999987762 2234556788999999976522 2357999999999999984 44
Q ss_pred CcccccCCceeEEEEEeCCeEEEEEEcCCC--eEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEE
Q 046902 244 DSVNVSYANVHVDVGSLEGCLCVFRFYNLV--YVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLL 321 (393)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l 321 (393)
.... ...++..+|+|++++..... .-++|.++-. ...|+.+..++... ......+. ++ .|++
T Consensus 195 ~~r~------~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p~~r------~~~~~~~~-~~-~i~v 258 (301)
T 2vpj_A 195 TKRS------GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIR--TDSWTTVTSMTTPR------CYVGATVL-RG-RLYA 258 (301)
T ss_dssp SCCB------SCEEEEETTEEEEECCBCSSSBCCCEEEEETT--TTEEEEECCCSSCC------BSCEEEEE-TT-EEEE
T ss_pred cccc------cceEEEECCEEEEEeCCCCCcccceEEEEeCC--CCcEEECCCCCCcc------cceeEEEE-CC-EEEE
Confidence 4332 23667789999999865432 3457777642 46799875443321 11122222 44 4555
Q ss_pred EEc-C-----cEEEEEECCCCcEEEE
Q 046902 322 EVR-R-----EKLVWFDLETNSLRTV 341 (393)
Q Consensus 322 ~~~-~-----~~l~~yd~~t~~~~~v 341 (393)
... + ..+..||+++++|+.+
T Consensus 259 ~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 259 IAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp ECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred EcCcCCCcccccEEEEcCCCCeEEEc
Confidence 421 1 3589999999999988
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.32 E-value=1.2e-10 Score=105.95 Aligned_cols=237 Identities=14% Similarity=0.074 Sum_probs=144.1
Q ss_pred CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCc
Q 046902 109 VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPR 188 (393)
Q Consensus 109 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~ 188 (393)
...+.++||.+++|..+++++ ... .....+. ++ + +|+.++... ......+++|+..+++|+.+..+|.
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p--~~r-~~~~~~~--~~----~-~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPF--EKR-RDAACVF--WD----N-VVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCS--CCC-BSCEEEE--ET----T-EEEEECCBS--SSBCCEEEEEETTTTEEEEEECCSS
T ss_pred CceEEEecCCCCCEecCCCCC--ccc-ceeEEEE--EC----C-EEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCCc
Confidence 457899999999999999877 221 1222222 11 1 455554332 2245689999999999999987772
Q ss_pred ccccccccccccccccCceeEeCceEEEeccCC---CCCcEEEEEECCCceeeeec-CCCcccccCCceeEEEEEeCCeE
Q 046902 189 FLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS---STRSVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVGSLEGCL 264 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~---~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~~~~G~L 264 (393)
.+.....+.++|.+|.+++.. .....+..||+.+.+|+.++ +|.... ...++..+|+|
T Consensus 91 ------------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~------~~~~~~~~~~i 152 (306)
T 3ii7_A 91 ------------PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC------SHGMVEANGLI 152 (306)
T ss_dssp ------------CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB------SCEEEEETTEE
T ss_pred ------------cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc------eeEEEEECCEE
Confidence 223455678899999998642 12356999999999999984 454332 23567789999
Q ss_pred EEEEEcCCC------eEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc------CcEEEEEE
Q 046902 265 CVFRFYNLV------YVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR------REKLVWFD 332 (393)
Q Consensus 265 ~~~~~~~~~------~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~yd 332 (393)
++++..... .-++|+++-. ...|+++..++... ...-+.+. ++ .|++... ...+..||
T Consensus 153 yv~GG~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r------~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd 222 (306)
T 3ii7_A 153 YVCGGSLGNNVSGRVLNSCEVYDPA--TETWTELCPMIEAR------KNHGLVFV-KD-KIFAVGGQNGLGGLDNVEYYD 222 (306)
T ss_dssp EEECCEESCTTTCEECCCEEEEETT--TTEEEEECCCSSCC------BSCEEEEE-TT-EEEEECCEETTEEBCCEEEEE
T ss_pred EEECCCCCCCCcccccceEEEeCCC--CCeEEECCCccchh------hcceEEEE-CC-EEEEEeCCCCCCCCceEEEee
Confidence 999864321 3457777642 46799876443321 11122222 44 4555421 13599999
Q ss_pred CCCCcEEEEEEecCCCC--eeeeEEEEeccccCCCCCCCCCCCCCccccccchHHHhhh
Q 046902 333 LETNSLRTVKIDTHGLD--FVDTEICMASLVPLSDKGGGCGGGINGMKRRNLEEKEKRH 389 (393)
Q Consensus 333 ~~t~~~~~v~~~~~~~~--~~~~~~y~~SL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
+++++|+.+.- ...+ ...+..+-..|+-+.... .....+.+..-+++..+|+.
T Consensus 223 ~~~~~W~~~~~--~p~~r~~~~~~~~~~~i~v~GG~~--~~~~~~~~~~yd~~~~~W~~ 277 (306)
T 3ii7_A 223 IKLNEWKMVSP--MPWKGVTVKCAAVGSIVYVLAGFQ--GVGRLGHILEYNTETDKWVA 277 (306)
T ss_dssp TTTTEEEECCC--CSCCBSCCEEEEETTEEEEEECBC--SSSBCCEEEEEETTTTEEEE
T ss_pred CCCCcEEECCC--CCCCccceeEEEECCEEEEEeCcC--CCeeeeeEEEEcCCCCeEEe
Confidence 99999998832 1112 344555545554443322 11233455556666655543
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.32 E-value=2.4e-10 Score=103.68 Aligned_cols=236 Identities=10% Similarity=0.108 Sum_probs=143.4
Q ss_pred ceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC---eEEcccc
Q 046902 110 QELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS---WRRISNL 186 (393)
Q Consensus 110 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~---W~~~~~~ 186 (393)
..++++||.|++|..+|.++ ... .....+. ++ =+|+.++.... ......+++|+..+++ |+.+..+
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p--~~r-~~~~~~~--~~-----~~l~v~GG~~~-~~~~~~~~~~d~~~~~~~~W~~~~~~ 99 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSIT--RKR-RYVASVS--LH-----DRIYVIGGYDG-RSRLSSVECLDYTADEDGVWYSVAPM 99 (301)
T ss_dssp CCEEEEETTTTEEEECCCCS--SCC-BSCEEEE--ET-----TEEEEECCBCS-SCBCCCEEEEETTCCTTCCCEEECCC
T ss_pred eEEEEEcCCCCeEEeCCCCC--hhh-ccccEEE--EC-----CEEEEEcCCCC-CccCceEEEEECCCCCCCeeEECCCC
Confidence 46899999999999999876 211 1122221 11 15555554321 2234578999999999 9999877
Q ss_pred CcccccccccccccccccCceeEeCceEEEeccCCC--CCcEEEEEECCCceeeeec-CCCcccccCCceeEEEEEeCCe
Q 046902 187 PRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS--TRSVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVGSLEGC 263 (393)
Q Consensus 187 p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~~~~G~ 263 (393)
|. .+.....+.++|.+|.+++... ....+..||+.+.+|+.++ +|.... ....+..+|+
T Consensus 100 p~------------~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~------~~~~~~~~~~ 161 (301)
T 2vpj_A 100 NV------------RRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTARE------GAGLVVASGV 161 (301)
T ss_dssp SS------------CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCB------SCEEEEETTE
T ss_pred CC------------CccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcc------cceEEEECCE
Confidence 72 2344556788999999986522 2357999999999999974 554332 2356778999
Q ss_pred EEEEEEcCCC--eEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc------CcEEEEEECCC
Q 046902 264 LCVFRFYNLV--YVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR------REKLVWFDLET 335 (393)
Q Consensus 264 L~~~~~~~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~yd~~t 335 (393)
|++++..... .-++|+++-. ...|+++..++... . .....+ -++ .|++... ...+..||+++
T Consensus 162 iyv~GG~~~~~~~~~~~~~d~~--~~~W~~~~~~p~~r----~--~~~~~~-~~~-~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 162 IYCLGGYDGLNILNSVEKYDPH--TGHWTNVTPMATKR----S--GAGVAL-LND-HIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETT--TTEEEEECCCSSCC----B--SCEEEE-ETT-EEEEECCBCSSSBCCCEEEEETTT
T ss_pred EEEECCCCCCcccceEEEEeCC--CCcEEeCCCCCccc----c--cceEEE-ECC-EEEEEeCCCCCcccceEEEEeCCC
Confidence 9999865432 3457777742 46899875443221 1 111222 244 5555421 13599999999
Q ss_pred CcEEEEEEecCCCC--eeeeEEEEeccccCCCCCCCCCCCCCccccccchHHHhh
Q 046902 336 NSLRTVKIDTHGLD--FVDTEICMASLVPLSDKGGGCGGGINGMKRRNLEEKEKR 388 (393)
Q Consensus 336 ~~~~~v~~~~~~~~--~~~~~~y~~SL~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
++|+.+.- ...+ .+.++.+-..|.-+.... .....+.++.-+.+..+|.
T Consensus 232 ~~W~~~~~--~p~~r~~~~~~~~~~~i~v~GG~~--~~~~~~~v~~yd~~~~~W~ 282 (301)
T 2vpj_A 232 DSWTTVTS--MTTPRCYVGATVLRGRLYAIAGYD--GNSLLSSIECYDPIIDSWE 282 (301)
T ss_dssp TEEEEECC--CSSCCBSCEEEEETTEEEEECCBC--SSSBEEEEEEEETTTTEEE
T ss_pred CcEEECCC--CCCcccceeEEEECCEEEEEcCcC--CCcccccEEEEcCCCCeEE
Confidence 99998832 1112 344555555554443321 1123345555566555554
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.28 E-value=9.7e-11 Score=106.76 Aligned_cols=238 Identities=11% Similarity=0.057 Sum_probs=142.8
Q ss_pred CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEee---cCCCCccEEEEEEeCCCCeEEccc
Q 046902 109 VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFK---GNDGDDVEVEVYSLKTNSWRRISN 185 (393)
Q Consensus 109 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~---~~~~~~~~~~Vyss~t~~W~~~~~ 185 (393)
...+.++||.|++|..++.++ .... ....+.+ + + +|+.++... ........+++|+..+++|+.++.
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p--~~r~-~~~~~~~--~---~--~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 107 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQ--VPRS-GLAGCVV--G---G--LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP 107 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCS--SCCB-SCEEEEE--T---T--EEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC
T ss_pred cceEEEEcCCCCeEeECCCCC--cccc-cceEEEE--C---C--EEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC
Confidence 346999999999999998877 2211 1222111 1 1 455444321 111123468999999999999987
Q ss_pred cCcccccccccccccccccCceeEeCceEEEeccCCC--CCcEEEEEECCCceeeeec-CCCcccccCCceeEEEEEeCC
Q 046902 186 LPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS--TRSVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVGSLEG 262 (393)
Q Consensus 186 ~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~~~~G 262 (393)
+|. .+.....+.++|.+|.+++... ....+..||+.+.+|+.++ +|.... ....+..+|
T Consensus 108 ~p~------------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~------~~~~~~~~~ 169 (308)
T 1zgk_A 108 MSV------------PRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI------GVGVAVLNR 169 (308)
T ss_dssp CSS------------CCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB------SCEEEEETT
T ss_pred CCc------------CccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc------ceEEEEECC
Confidence 772 2234556788999999976411 1246999999999999984 554332 235667799
Q ss_pred eEEEEEEcCCC--eEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-c-----CcEEEEEECC
Q 046902 263 CLCVFRFYNLV--YVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-R-----REKLVWFDLE 334 (393)
Q Consensus 263 ~L~~~~~~~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~-----~~~l~~yd~~ 334 (393)
+|++++..... .-++|+++-. ...|+.+..++... . ..-..+. ++ .|++.. . ...+..||++
T Consensus 170 ~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r----~--~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 170 LLYAVGGFDGTNRLNSAECYYPE--RNEWRMITAMNTIR----S--GAGVCVL-HN-CIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp EEEEECCBCSSCBCCCEEEEETT--TTEEEECCCCSSCC----B--SCEEEEE-TT-EEEEECCBCSSSBCCCEEEEETT
T ss_pred EEEEEeCCCCCCcCceEEEEeCC--CCeEeeCCCCCCcc----c--cceEEEE-CC-EEEEEeCCCCCCccceEEEEeCC
Confidence 99999865432 3457777642 46899875443321 1 1122222 44 555543 1 1359999999
Q ss_pred CCcEEEEEEecCCCC--eeeeEEEEeccccCCCCCCCCCCCCCccccccchHHHhh
Q 046902 335 TNSLRTVKIDTHGLD--FVDTEICMASLVPLSDKGGGCGGGINGMKRRNLEEKEKR 388 (393)
Q Consensus 335 t~~~~~v~~~~~~~~--~~~~~~y~~SL~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
+++|+.+.- ...+ ...+..+-..|.-+.... .....+.++.-+.+..+|.
T Consensus 240 ~~~W~~~~~--~p~~r~~~~~~~~~~~i~v~GG~~--~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 240 TETWTFVAP--MKHRRSALGITVHQGRIYVLGGYD--GHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp TTEEEECCC--CSSCCBSCEEEEETTEEEEECCBC--SSCBCCEEEEEETTTTEEE
T ss_pred CCcEEECCC--CCCCccceEEEEECCEEEEEcCcC--CCcccceEEEEcCCCCEEe
Confidence 999998831 1112 344555555555443321 1233455566666666664
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.26 E-value=3e-10 Score=103.06 Aligned_cols=236 Identities=14% Similarity=0.141 Sum_probs=142.7
Q ss_pred ceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcc
Q 046902 110 QELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRF 189 (393)
Q Consensus 110 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~ 189 (393)
..+.++||.+++|..++.++ ... .....+. ++ -+|+.++.... ......+++|+..+++|+.++.+|.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p--~~r-~~~~~~~--~~-----~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~- 97 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELP--SRR-CRAGMVY--MA-----GLVFAVGGFNG-SLRVRTVDSYDPVKDQWTSVANMRD- 97 (302)
T ss_dssp CCEEEEETTTTEEEEECCCS--SCC-BSCEEEE--ET-----TEEEEESCBCS-SSBCCCEEEEETTTTEEEEECCCSS-
T ss_pred CcEEEEcCcCCcEeEcccCC--ccc-ccceEEE--EC-----CEEEEEeCcCC-CccccceEEECCCCCceeeCCCCCc-
Confidence 46899999999999998776 221 1122221 11 24555543221 1234568999999999999987772
Q ss_pred cccccccccccccccCceeEeCceEEEeccCCC--CCcEEEEEECCCceeeeec-CCCcccccCCceeEEEEEeCCeEEE
Q 046902 190 LRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS--TRSVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVGSLEGCLCV 266 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~~~~G~L~~ 266 (393)
.+.....+.++|.+|.+++... ....+..||+.+.+|+.++ +|.... ....+..+|+|++
T Consensus 98 -----------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~------~~~~~~~~~~iyv 160 (302)
T 2xn4_A 98 -----------RRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRS------SVGVGVVGGLLYA 160 (302)
T ss_dssp -----------CCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCB------SCEEEEETTEEEE
T ss_pred -----------cccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCccc------CceEEEECCEEEE
Confidence 2234556788999999986422 1246899999999999984 443322 2356778999999
Q ss_pred EEEcCCC----eEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc------CcEEEEEECCCC
Q 046902 267 FRFYNLV----YVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR------REKLVWFDLETN 336 (393)
Q Consensus 267 ~~~~~~~----~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~yd~~t~ 336 (393)
++..... .-++|+++-. ...|+.+..++... ......+ -++ .|++... ...+..||++++
T Consensus 161 ~GG~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r------~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 161 VGGYDVASRQCLSTVECYNAT--TNEWTYIAEMSTRR------SGAGVGV-LNN-LLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp ECCEETTTTEECCCEEEEETT--TTEEEEECCCSSCC------BSCEEEE-ETT-EEEEECCBSSSSBCCCEEEEETTTT
T ss_pred EeCCCCCCCccccEEEEEeCC--CCcEEECCCCcccc------ccccEEE-ECC-EEEEECCCCCCcccceEEEEeCCCC
Confidence 9864321 2357777742 46799875443321 1112222 244 5555421 135999999999
Q ss_pred cEEEEEEecCCCC--eeeeEEEEeccccCCCCCCCCCCCCCccccccchHHHhh
Q 046902 337 SLRTVKIDTHGLD--FVDTEICMASLVPLSDKGGGCGGGINGMKRRNLEEKEKR 388 (393)
Q Consensus 337 ~~~~v~~~~~~~~--~~~~~~y~~SL~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
+|+.+.- ...+ ...++.+...|.-+.... .....+..+.-+.+..+|.
T Consensus 231 ~W~~~~~--~~~~r~~~~~~~~~~~i~v~GG~~--~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 231 AWRQVAD--MNMCRRNAGVCAVNGLLYVVGGDD--GSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp EEEEECC--CSSCCBSCEEEEETTEEEEECCBC--SSSBCCCEEEEETTTTEEE
T ss_pred CEeeCCC--CCCccccCeEEEECCEEEEECCcC--CCcccccEEEEcCCCCeEE
Confidence 9998832 1122 344555555555443321 1223445566566655554
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.26 E-value=7e-11 Score=109.97 Aligned_cols=262 Identities=11% Similarity=0.011 Sum_probs=148.5
Q ss_pred eeeeeceEEEee--CCceEEEEeccc--cceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeec--C--CCCc
Q 046902 96 LGSCNGLIALCN--SVQELALFNPST--RKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKG--N--DGDD 167 (393)
Q Consensus 96 ~~s~~GLl~~~~--~~~~~~V~NP~T--~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~--~--~~~~ 167 (393)
.+..+|.|.+.. ....++++||.+ ++|..+|+++ .........+. ++ + +|+.++.... . ....
T Consensus 15 ~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p--~~~R~~~~~~~--~~---~--~lyv~GG~~~~~~~~~~~~ 85 (357)
T 2uvk_A 15 GAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFP--GGPRDQATSAF--ID---G--NLYVFGGIGKNSEGLTQVF 85 (357)
T ss_dssp EEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCT--TCCCBSCEEEE--ET---T--EEEEECCEEECTTSCEEEC
T ss_pred EEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCC--CCcCccceEEE--EC---C--EEEEEcCCCCCCCccceee
Confidence 334467665544 235799999984 9999998866 11111222222 22 1 4555554311 1 1123
Q ss_pred cEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCC-------------------------
Q 046902 168 VEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS------------------------- 222 (393)
Q Consensus 168 ~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~------------------------- 222 (393)
..+++|++.+++|+.+..+++ ..+.....+.++|.+|.+++...
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p-----------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAP-----------MGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINA 154 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCS-----------SCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccEEEEeCCCCcEEECCCCCC-----------cccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhh
Confidence 568999999999999976551 11233445679999999986421
Q ss_pred -----------CCcEEEEEECCCceeeee-cCCCcccccCCceeEEEEEeCCeEEEEEEcCC---CeEEEEEEeecCCCC
Q 046902 223 -----------TRSVIVAFDLVAEEFYQL-PLPDSVNVSYANVHVDVGSLEGCLCVFRFYNL---VYVDMWMMKEHAVKE 287 (393)
Q Consensus 223 -----------~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~---~~~~iW~l~~~~~~~ 287 (393)
....+.+||+.+.+|+.+ ++|.... ....++..+|+|++++.... ..-++|.++-+....
T Consensus 155 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~-----~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~ 229 (357)
T 2uvk_A 155 HYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGT-----AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL 229 (357)
T ss_dssp HHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCC-----BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---C
T ss_pred hhccccccccCCcccEEEEeCCCCcEEECCCCCCCCc-----ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC
Confidence 125899999999999997 4553321 12467788999999975421 134577775211246
Q ss_pred CeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC-----------------------cEEEEEECCCCcEEEEEEe
Q 046902 288 SWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR-----------------------EKLVWFDLETNSLRTVKID 344 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-----------------------~~l~~yd~~t~~~~~v~~~ 344 (393)
.|+.+..++.+.. . ....++..++ .|++.... ..+..||+++++|+.+.-
T Consensus 230 ~W~~~~~~~~~~~--~---~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~- 302 (357)
T 2uvk_A 230 KWNKLAPVSSPDG--V---AGGFAGISND-SLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE- 302 (357)
T ss_dssp EEEECCCSSTTTC--C---BSCEEEEETT-EEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE-
T ss_pred cEEecCCCCCCcc--c---ccceEEEECC-EEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC-
Confidence 7998765532211 1 1111222244 45553220 147899999999999843
Q ss_pred cCCCC--eeeeEEEEeccccCCCCCCCCCCCCCccccccchHHHhhhhc
Q 046902 345 THGLD--FVDTEICMASLVPLSDKGGGCGGGINGMKRRNLEEKEKRHKK 391 (393)
Q Consensus 345 ~~~~~--~~~~~~y~~SL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
...+ ...++.+-..++-+ ......+...+.+....++.+||.+.+
T Consensus 303 -~p~~r~~~~~~~~~~~i~v~-GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 303 -LSQGRAYGVSLPWNNSLLII-GGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp -CSSCCBSSEEEEETTEEEEE-EEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred -CCCCcccceeEEeCCEEEEE-eeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 2222 33444444444443 222333444577777777777776543
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.24 E-value=1.3e-09 Score=99.44 Aligned_cols=196 Identities=12% Similarity=0.055 Sum_probs=121.6
Q ss_pred ceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeec---C--CCCccEEEEEEeCCCCeEEcc
Q 046902 110 QELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKG---N--DGDDVEVEVYSLKTNSWRRIS 184 (393)
Q Consensus 110 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~---~--~~~~~~~~Vyss~t~~W~~~~ 184 (393)
..+.++||.|++|.. ++++ ...+ ...++.... .+ +|+.++.... . ......+++|+..+++|+.++
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~--~p~~--r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLS--SQVP--KNHVSLVTK--EN--QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp TEEEEEETTTTEEEE-EECC--CCSC--SSEEEEECT--TC--CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred CceEEECCCCCeEec-CCCC--CCCC--ccceEEEEE--CC--EEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 679999999999986 4333 1111 122222221 22 3444443211 1 112234899999999999998
Q ss_pred ccCcccccccccccccccccCceeEeCceEEEeccC-----CCCCcEEEEEECCCceeeeec-CCCcccccCCceeEEEE
Q 046902 185 NLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPK-----SSTRSVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVG 258 (393)
Q Consensus 185 ~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~-----~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~ 258 (393)
.+|. .+.....+.++|.+|.+++. ......+..||+.+.+|+.+. +|.... ....+
T Consensus 84 ~~p~------------~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~------~~~~~ 145 (315)
T 4asc_A 84 PLPS------------PRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVY------GHTVL 145 (315)
T ss_dssp CBSS------------CEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCB------SCEEE
T ss_pred CCCc------------chhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccc------ceeEE
Confidence 7772 23445567899999999873 122356999999999999974 554332 23567
Q ss_pred EeCCeEEEEEEc-CCC--eEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC-----cEEEE
Q 046902 259 SLEGCLCVFRFY-NLV--YVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR-----EKLVW 330 (393)
Q Consensus 259 ~~~G~L~~~~~~-~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-----~~l~~ 330 (393)
..+|+|++++.. ... .-++|+++-. ...|+++..++.+. .....++ -++.++++.... ..+..
T Consensus 146 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r------~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 216 (315)
T 4asc_A 146 SHMDLVYVIGGKGSDRKCLNKMCVYDPK--KFEWKELAPMQTAR------SLFGATV-HDGRIIVAAGVTDTGLTSSAEV 216 (315)
T ss_dssp EETTEEEEECCBCTTSCBCCCEEEEETT--TTEEEECCCCSSCC------BSCEEEE-ETTEEEEEEEECSSSEEEEEEE
T ss_pred EECCEEEEEeCCCCCCcccceEEEEeCC--CCeEEECCCCCCch------hceEEEE-ECCEEEEEeccCCCCccceEEE
Confidence 799999999875 221 3467887742 46799875443321 1112222 244444443321 25999
Q ss_pred EECCCCcEEEE
Q 046902 331 FDLETNSLRTV 341 (393)
Q Consensus 331 yd~~t~~~~~v 341 (393)
||+++++|+.+
T Consensus 217 yd~~~~~W~~~ 227 (315)
T 4asc_A 217 YSITDNKWAPF 227 (315)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCeEEEC
Confidence 99999999998
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.17 E-value=2.5e-09 Score=97.72 Aligned_cols=224 Identities=15% Similarity=0.151 Sum_probs=131.7
Q ss_pred ceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeec--CC---CCccEEEEEEe
Q 046902 101 GLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKG--ND---GDDVEVEVYSL 175 (393)
Q Consensus 101 GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~--~~---~~~~~~~Vyss 175 (393)
+.|++... ..+.++||.|++|...|.+. ..+.. .++.... . -+|+.++.... .. .....+++|+.
T Consensus 16 ~~i~~~GG-~~~~~yd~~~~~W~~~~~~~---~~~r~--~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~~~~~d~ 85 (318)
T 2woz_A 16 DLILLVND-TAAVAYDPMENECYLTALAE---QIPRN--HSSIVTQ--Q--NQVYVVGGLYVDEENKDQPLQSYFFQLDN 85 (318)
T ss_dssp EEEEEECS-SEEEEEETTTTEEEEEEECT---TSCSS--EEEEECS--S--SCEEEEESSCC-------CCCBEEEEEET
T ss_pred chhhhccc-cceEEECCCCCceecccCCc---cCCcc--ceEEEEE--C--CEEEEECCcccCccccCCCccccEEEEeC
Confidence 34444332 34789999999999844321 11111 1222211 1 24454543210 00 11234899999
Q ss_pred CCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCC----CCCcEEEEEECCCceeeeec-CCCcccccC
Q 046902 176 KTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS----STRSVIVAFDLVAEEFYQLP-LPDSVNVSY 250 (393)
Q Consensus 176 ~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~----~~~~~il~fD~~~e~~~~i~-lP~~~~~~~ 250 (393)
.+++|+.++.+|. .+.....+.++|.+|.+++.. .....+.+||+.+.+|+.+. +|....
T Consensus 86 ~~~~W~~~~~~p~------------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--- 150 (318)
T 2woz_A 86 VSSEWVGLPPLPS------------ARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY--- 150 (318)
T ss_dssp TTTEEEECSCBSS------------CBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE---
T ss_pred CCCcEEECCCCCc------------cccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc---
Confidence 9999999987772 223455678899999998642 12256999999999999984 554432
Q ss_pred CceeEEEEEeCCeEEEEEEcCC---CeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc---
Q 046902 251 ANVHVDVGSLEGCLCVFRFYNL---VYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR--- 324 (393)
Q Consensus 251 ~~~~~~l~~~~G~L~~~~~~~~---~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~--- 324 (393)
...++..+|+|++++.... ..-++|+++-. ...|+.+..++... . ....++ -++.++++...
T Consensus 151 ---~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r----~--~~~~~~-~~~~iyv~GG~~~~ 218 (318)
T 2woz_A 151 ---GHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPK--KGDWKDLAPMKTPR----S--MFGVAI-HKGKIVIAGGVTED 218 (318)
T ss_dssp ---SCEEEEETTEEEEECCEESSSCBCCCEEEEETT--TTEEEEECCCSSCC----B--SCEEEE-ETTEEEEEEEEETT
T ss_pred ---ccEEEEECCEEEEEcCCCCCCCccceEEEEcCC--CCEEEECCCCCCCc----c--cceEEE-ECCEEEEEcCcCCC
Confidence 2356678999999986421 13457887742 46799875443221 1 112222 24444444321
Q ss_pred --CcEEEEEECCCCcEEEEEEecCCCC----eeeeEEEEeccccCCC
Q 046902 325 --REKLVWFDLETNSLRTVKIDTHGLD----FVDTEICMASLVPLSD 365 (393)
Q Consensus 325 --~~~l~~yd~~t~~~~~v~~~~~~~~----~~~~~~y~~SL~~~~~ 365 (393)
...+..||+++++|+.+. ..| ...+..+-..|.-+..
T Consensus 219 ~~~~~~~~yd~~~~~W~~~~----~~p~~r~~~~~~~~~~~i~v~GG 261 (318)
T 2woz_A 219 GLSASVEAFDLKTNKWEVMT----EFPQERSSISLVSLAGSLYAIGG 261 (318)
T ss_dssp EEEEEEEEEETTTCCEEECC----CCSSCCBSCEEEEETTEEEEECC
T ss_pred CccceEEEEECCCCeEEECC----CCCCcccceEEEEECCEEEEECC
Confidence 125889999999999983 233 3445555555555433
No 14
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.07 E-value=2.1e-11 Score=79.76 Aligned_cols=41 Identities=22% Similarity=0.350 Sum_probs=38.7
Q ss_pred CCCCcHHHHHHHhccCCccceeeeeecccchhhhcCChHHH
Q 046902 2 SKKIPLDIITGIFCRQPVKSLLRFRCVSKTCCSLIDSQDFI 42 (393)
Q Consensus 2 ~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~s~~F~ 42 (393)
+..||+|++.+||++||+++++++++|||+|+.++.++.|-
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 67899999999999999999999999999999999998864
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.05 E-value=5.4e-08 Score=90.28 Aligned_cols=199 Identities=12% Similarity=0.036 Sum_probs=116.9
Q ss_pred ceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCC-------------------------
Q 046902 110 QELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGND------------------------- 164 (393)
Q Consensus 110 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~------------------------- 164 (393)
..++++||.|++|..+++++ . .+....... .++ =+|+.++......
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~--p-~~r~~~~~~-~~~-----~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHA--P-MGMAGHVTF-VHN-----GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHY 156 (357)
T ss_dssp CCEEEEETTTTEEEECSCCC--S-SCCSSEEEE-EET-----TEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccEEEEeCCCCcEEECCCCC--C-cccccceEE-EEC-----CEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhh
Confidence 36999999999999998765 1 111111111 122 1566665421100
Q ss_pred --------CCccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCC---CCCcEEEEEEC-
Q 046902 165 --------GDDVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS---STRSVIVAFDL- 232 (393)
Q Consensus 165 --------~~~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~---~~~~~il~fD~- 232 (393)
.....+++|+..+++|+.+..+|. .. ......+.++|.+|.+++.. .....+..||+
T Consensus 157 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~----------~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d 225 (357)
T 2uvk_A 157 FDKKAEDYFFNKFLLSFDPSTQQWSYAGESPW----------YG-TAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFT 225 (357)
T ss_dssp HSSCGGGGCCCCEEEEEETTTTEEEEEEECSS----------CC-CBSCEEEEETTEEEEECCEEETTEECCCEEEEECC
T ss_pred ccccccccCCcccEEEEeCCCCcEEECCCCCC----------CC-cccccEEEECCEEEEEeeecCCCcccCceEEEEec
Confidence 013589999999999999987762 11 12255678999999997641 11345788887
Q ss_pred -CCceeeeec-CCCcccccCCceeEEEEEeCCeEEEEEEcCC-------------------CeEEEEEEeecCCCCCeEE
Q 046902 233 -VAEEFYQLP-LPDSVNVSYANVHVDVGSLEGCLCVFRFYNL-------------------VYVDMWMMKEHAVKESWTK 291 (393)
Q Consensus 233 -~~e~~~~i~-lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~-------------------~~~~iW~l~~~~~~~~W~~ 291 (393)
.+.+|+.+. +|.... .....++..+|+|++++.... ...++|+++-. ...|++
T Consensus 226 ~~~~~W~~~~~~~~~~~----~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~~ 299 (357)
T 2uvk_A 226 GNNLKWNKLAPVSSPDG----VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWDK 299 (357)
T ss_dssp ---CEEEECCCSSTTTC----CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEE
T ss_pred CCCCcEEecCCCCCCcc----cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC--CCceee
Confidence 899999874 433221 112357888999999986321 12456776642 468999
Q ss_pred EEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC------cEEEEEECCCCcEEEE
Q 046902 292 LFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR------EKLVWFDLETNSLRTV 341 (393)
Q Consensus 292 ~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~------~~l~~yd~~t~~~~~v 341 (393)
+..++.... . ..++.-++.++++...+ ..++.++++++++.+.
T Consensus 300 ~~~~p~~r~------~-~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 300 SGELSQGRA------Y-GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEECSSCCB------S-SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred CCCCCCCcc------c-ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 876654321 1 11222355555554321 2588899999998876
No 16
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.05 E-value=3.8e-11 Score=106.58 Aligned_cols=48 Identities=17% Similarity=0.287 Sum_probs=45.7
Q ss_pred CCCCcHHHHHHHhccCCcccee-eeeecccchhhhcCChHHHHHHHhcc
Q 046902 2 SKKIPLDIITGIFCRQPVKSLL-RFRCVSKTCCSLIDSQDFIKLHLNHS 49 (393)
Q Consensus 2 ~~~LP~Dll~eIL~rLP~~sl~-r~r~VcK~W~~li~s~~F~~~~~~~~ 49 (393)
+..||+||+.+||+|||+++|+ ||++|||+|+++++++.|.+.++.+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 6789999999999999999999 99999999999999999999988766
No 17
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.03 E-value=2.4e-07 Score=88.45 Aligned_cols=275 Identities=12% Similarity=0.088 Sum_probs=138.4
Q ss_pred CCCCCcHHHHHHHhccCCccceeeeeecccchhhhcCChHHHHHHHhcccCCCCceEEEeecCCCeeeecCCCCCCCC--
Q 046902 1 MSKKIPLDIITGIFCRQPVKSLLRFRCVSKTCCSLIDSQDFIKLHLNHSITTRSNRRLILKGAHDLYALDFDTLTLGT-- 78 (393)
Q Consensus 1 ~~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~s~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 78 (393)
+++.||+|++..||++|++++|+++.+|||+|+.++.++.+-+....+.....+.. .- . .. ...........
T Consensus 18 ~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~-~~-~--~~--~~~~~~~~~~wk~ 91 (445)
T 2ovr_B 18 FISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-IK-R--RK--VIKPGFIHSPWKS 91 (445)
T ss_dssp TTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCC-CC-C------CCSSCCCCCHHHH
T ss_pred hhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccc-cc-c--ce--ecCCCccCCcHHH
Confidence 36789999999999999999999999999999999999988776654432110000 00 0 00 00000000000
Q ss_pred ----------cccccCC-C---CCC-CC-ccEEeeeeeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEE
Q 046902 79 ----------GVQPHHH-P---LNI-GS-GTEVLGSCNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYG 142 (393)
Q Consensus 79 ----------~~~~~~~-p---~~~-~~-~~~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~ 142 (393)
.+..-.. + +.. .. -...+...+.+|+....+..+.|||..+++....-... .....+
T Consensus 92 ~~~~~~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~ 164 (445)
T 2ovr_B 92 AYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH-------TGGVWS 164 (445)
T ss_dssp HHHHHHHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCC-------SSCEEE
T ss_pred HHhhhhhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCC-------CCCEEE
Confidence 0000000 0 000 11 12344455566666666788999999988754321111 122344
Q ss_pred EeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCC
Q 046902 143 FGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS 222 (393)
Q Consensus 143 ~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~ 222 (393)
+.+++ + .++... ....+.+|+..++.-.. .+. .+. ..-.++..+|.....+..
T Consensus 165 ~~~~~---~-~l~s~~-------~dg~i~vwd~~~~~~~~--~~~----------~h~--~~v~~~~~~~~~l~s~s~-- 217 (445)
T 2ovr_B 165 SQMRD---N-IIISGS-------TDRTLKVWNAETGECIH--TLY----------GHT--STVRCMHLHEKRVVSGSR-- 217 (445)
T ss_dssp EEEET---T-EEEEEE-------TTSCEEEEETTTTEEEE--EEC----------CCS--SCEEEEEEETTEEEEEET--
T ss_pred EEecC---C-EEEEEe-------CCCeEEEEECCcCcEEE--EEC----------CCC--CcEEEEEecCCEEEEEeC--
Confidence 55552 2 222222 23468889988764221 111 000 111233344444333332
Q ss_pred CCcEEEEEECCCceeee-ecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCC
Q 046902 223 TRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPT 301 (393)
Q Consensus 223 ~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~ 301 (393)
...|..+|+.+.+... +..... ...-...+|...+++..+. .+.+|-++. ...+..+....
T Consensus 218 -dg~i~~wd~~~~~~~~~~~~~~~--------~v~~~~~~~~~l~~~~~dg-~i~iwd~~~------~~~~~~~~~~~-- 279 (445)
T 2ovr_B 218 -DATLRVWDIETGQCLHVLMGHVA--------AVRCVQYDGRRVVSGAYDF-MVKVWDPET------ETCLHTLQGHT-- 279 (445)
T ss_dssp -TSEEEEEESSSCCEEEEEECCSS--------CEEEEEECSSCEEEEETTS-CEEEEEGGG------TEEEEEECCCS--
T ss_pred -CCEEEEEECCCCcEEEEEcCCcc--------cEEEEEECCCEEEEEcCCC-EEEEEECCC------CcEeEEecCCC--
Confidence 3579999988765432 222111 1122233777666665544 888887653 12233332111
Q ss_pred CCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcE
Q 046902 302 RSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 338 (393)
Q Consensus 302 ~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~ 338 (393)
..+.++.-++..++....++.+..||+++++.
T Consensus 280 -----~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 311 (445)
T 2ovr_B 280 -----NRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC 311 (445)
T ss_dssp -----SCEEEEEECSSEEEEEETTSCEEEEETTTCCE
T ss_pred -----CceEEEEECCCEEEEEeCCCeEEEEECCCCCE
Confidence 01112222555555555555566677666553
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.99 E-value=2.2e-08 Score=101.36 Aligned_cols=216 Identities=12% Similarity=0.075 Sum_probs=126.1
Q ss_pred eeceEEEeeC-----CceEEEEeccccceeccC-CCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEE
Q 046902 99 CNGLIALCNS-----VQELALFNPSTRKLKTLP-LPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEV 172 (393)
Q Consensus 99 ~~GLl~~~~~-----~~~~~V~NP~T~~~~~LP-~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~V 172 (393)
.+|.|++... ...++++||.|++|..++ +.+. ...+.....++...... +-+|+.++...........+++
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~-~~~p~~R~~hs~~~~~~--~~~lyv~GG~~~~~~~~~dv~~ 472 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSS-SEVPVARMCHTFTTISR--NNQLLLIGGRKAPHQGLSDNWI 472 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCC-SCCCCCCBSCEEEEETT--TTEEEEECCBSSTTCBCCCCEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCC-CCCCccccceEEEEEcc--CCEEEEEcCCCCCCCccccEEE
Confidence 4555544432 246999999999999998 5210 00111111112222210 1146666543322223456999
Q ss_pred EEeCCCCeEEccccCcccccccccccccccccCceeEe-CceEEEeccCCCCCcEEEEEECCCceeeeec----CCCccc
Q 046902 173 YSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA-GGALHWVSPKSSTRSVIVAFDLVAEEFYQLP----LPDSVN 247 (393)
Q Consensus 173 yss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~-~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~----lP~~~~ 247 (393)
|+..+++|+.+..+|. .+.....+.+ +|.+|.+++..... .+.+||+.+.+|+.+. +|....
T Consensus 473 yd~~t~~W~~~~~~p~------------~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r~ 539 (695)
T 2zwa_A 473 FDMKTREWSMIKSLSH------------TRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQNSL 539 (695)
T ss_dssp EETTTTEEEECCCCSB------------CCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGSCC
T ss_pred EeCCCCcEEECCCCCC------------CcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCccc
Confidence 9999999999987772 2234555665 99999998763333 7999999999999986 343322
Q ss_pred ccCCceeEEEEEeC---CeEEEEEEcCC----CeEEEEEEeecCCCCC------eEEEEEeeCCCCCCCcceeeEEEEEe
Q 046902 248 VSYANVHVDVGSLE---GCLCVFRFYNL----VYVDMWMMKEHAVKES------WTKLFSVQEPTPTRSFLFLRPLGYSR 314 (393)
Q Consensus 248 ~~~~~~~~~l~~~~---G~L~~~~~~~~----~~~~iW~l~~~~~~~~------W~~~~~i~~~~~~~~~~~~~~~~~~~ 314 (393)
....++++ |+|+++++... ..-++|+++-. ... |+++..++... . ...-..+..
T Consensus 540 ------~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~~~---R--~~~~~~~~~ 606 (695)
T 2zwa_A 540 ------VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD--AENATEPITVIKKLQHPLFQ---R--YGSQIKYIT 606 (695)
T ss_dssp ------BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC--TTCSSCCEEEEEEEECGGGC---C--BSCEEEEEE
T ss_pred ------ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc--CCccccceEEEEcCCCCCCC---c--ccceEEEeC
Confidence 12323334 89999987521 13467777642 244 88877643211 1 112233333
Q ss_pred CCcEEEEEEc--------CcEEEEEECCCCcEEEEEE
Q 046902 315 NGVKLLLEVR--------REKLVWFDLETNSLRTVKI 343 (393)
Q Consensus 315 ~g~~i~l~~~--------~~~l~~yd~~t~~~~~v~~ 343 (393)
++.++++... ...+..||+++++|+.+.+
T Consensus 607 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 607 PRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp TTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred CCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeec
Confidence 3444444321 2359999999999996644
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.98 E-value=6.4e-07 Score=85.79 Aligned_cols=43 Identities=19% Similarity=0.257 Sum_probs=37.9
Q ss_pred CCCCcHHHHHHHhccCCccceeeeeecccchhhhcCC-hHHHHH
Q 046902 2 SKKIPLDIITGIFCRQPVKSLLRFRCVSKTCCSLIDS-QDFIKL 44 (393)
Q Consensus 2 ~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~s-~~F~~~ 44 (393)
++.||+|++.+||+.||+++|+++.+|||+|+.++.+ +..-+.
T Consensus 15 ~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~ 58 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKK 58 (464)
T ss_dssp HHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHH
T ss_pred hHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 3569999999999999999999999999999999998 654333
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.86 E-value=1.6e-07 Score=89.47 Aligned_cols=284 Identities=13% Similarity=0.088 Sum_probs=141.2
Q ss_pred CCCCcHH----HHHHHhccCCccceeeeeecccchhhhcCChHHHHHHHhcccCC---------CCce-EEEeecCCCee
Q 046902 2 SKKIPLD----IITGIFCRQPVKSLLRFRCVSKTCCSLIDSQDFIKLHLNHSITT---------RSNR-RLILKGAHDLY 67 (393)
Q Consensus 2 ~~~LP~D----ll~eIL~rLP~~sl~r~r~VcK~W~~li~s~~F~~~~~~~~~~~---------~~~~-~~~~~~~~~~~ 67 (393)
++.||+| |+..||+.|++++|+++.+|||+|+.++.++.+-+....+.... ...+ ..++.......
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 90 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDG 90 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC-------
T ss_pred HHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCCCC
Confidence 3569999 99999999999999999999999999999887655544332100 0000 00000000000
Q ss_pred eecC-------------------CCCCCCC-cccccCCCCCCCCccEEeeeeeceEEEeeCCceEEEEeccccceeccCC
Q 046902 68 ALDF-------------------DTLTLGT-GVQPHHHPLNIGSGTEVLGSCNGLIALCNSVQELALFNPSTRKLKTLPL 127 (393)
Q Consensus 68 ~~~~-------------------~~~~~~~-~~~~~~~p~~~~~~~~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~ 127 (393)
.... ..+.... ....+.........+..++..+.+++....+..+.|||..|++....-.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 170 (435)
T 1p22_A 91 NAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT 170 (435)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEEC
T ss_pred CCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEc
Confidence 0000 0000000 0000000000012233444445555555567789999999887554322
Q ss_pred CCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcccccccccccccccccCce
Q 046902 128 PPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYG 207 (393)
Q Consensus 128 ~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~ 207 (393)
.. .....++.+|. . .++... ....+.+|+..++.-... +. .+ ...-.+
T Consensus 171 ~h-------~~~v~~l~~~~---~-~l~sg~-------~dg~i~vwd~~~~~~~~~--~~----------~h--~~~v~~ 218 (435)
T 1p22_A 171 GH-------TGSVLCLQYDE---R-VIITGS-------SDSTVRVWDVNTGEMLNT--LI----------HH--CEAVLH 218 (435)
T ss_dssp CC-------SSCEEEEECCS---S-EEEEEE-------TTSCEEEEESSSCCEEEE--EC----------CC--CSCEEE
T ss_pred CC-------CCcEEEEEECC---C-EEEEEc-------CCCeEEEEECCCCcEEEE--Ec----------CC--CCcEEE
Confidence 11 12234455532 2 233222 234688999887753221 11 00 011123
Q ss_pred eEeCceEEEeccCCCCCcEEEEEECCCceeeee-cCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCC
Q 046902 208 VLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQL-PLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVK 286 (393)
Q Consensus 208 v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~ 286 (393)
+..++.....+.. ...|..+|+.+..-... ...... .. .......+|...+++..+. .+.||-++..
T Consensus 219 l~~~~~~l~s~s~---dg~i~vwd~~~~~~~~~~~~~~~~---~~--~v~~~~~~~~~l~s~~~dg-~i~vwd~~~~--- 286 (435)
T 1p22_A 219 LRFNNGMMVTCSK---DRSIAVWDMASPTDITLRRVLVGH---RA--AVNVVDFDDKYIVSASGDR-TIKVWNTSTC--- 286 (435)
T ss_dssp EECCTTEEEEEET---TSCEEEEECSSSSCCEEEEEECCC---SS--CEEEEEEETTEEEEEETTS-EEEEEETTTC---
T ss_pred EEEcCCEEEEeeC---CCcEEEEeCCCCCCceeeeEecCC---CC--cEEEEEeCCCEEEEEeCCC-eEEEEECCcC---
Confidence 3344444333332 35788999876543211 111111 01 1122233666666665544 8999987631
Q ss_pred CCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEE
Q 046902 287 ESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 339 (393)
Q Consensus 287 ~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~ 339 (393)
..+..+.... ..+.++..+++.++....++.+..||+++++..
T Consensus 287 ---~~~~~~~~~~-------~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 287 ---EFVRTLNGHK-------RGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp ---CEEEEEECCS-------SCEEEEEEETTEEEEEETTSCEEEEETTTCCEE
T ss_pred ---cEEEEEcCCC-------CcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEE
Confidence 2344444211 112233335677777777778999999987643
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.57 E-value=1.3e-06 Score=87.87 Aligned_cols=106 Identities=10% Similarity=0.056 Sum_probs=70.9
Q ss_pred eEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCccc
Q 046902 111 ELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRFL 190 (393)
Q Consensus 111 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~~ 190 (393)
.+.++||.|++|..++.++ ..........++..| =+|+.++.. ....+++|++.+++|+.+..++.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~--~~~~~~~~~~~~~~~-----g~lyv~GG~-----~~~~v~~yd~~t~~W~~~~~~~~-- 285 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTV--TKHDMFCPGISMDGN-----GQIVVTGGN-----DAKKTSLYDSSSDSWIPGPDMQV-- 285 (656)
T ss_dssp EEEEECTTTCCBCCCEEEE--CSCCCSSCEEEECTT-----SCEEEECSS-----STTCEEEEEGGGTEEEECCCCSS--
T ss_pred EEEEEeCCCCcEEeCcccC--CCCCCccccccCCCC-----CCEEEeCCC-----CCCceEEecCcCCceeECCCCCc--
Confidence 6899999999999998765 211111111222211 245555432 12369999999999999987761
Q ss_pred ccccccccccccccCceeEe-CceEEEeccC-C--CCCcEEEEEECCCceeeee
Q 046902 191 RDFYDYLYHSLFRKGYGVLA-GGALHWVSPK-S--STRSVIVAFDLVAEEFYQL 240 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~v~~-~G~lyw~~~~-~--~~~~~il~fD~~~e~~~~i 240 (393)
.+.....+.+ +|++|.+++. . .....+..||+.+++|..+
T Consensus 286 ----------~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 286 ----------ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp ----------CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred ----------cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 2234455677 9999999873 1 1225689999999999986
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.47 E-value=2.6e-06 Score=86.16 Aligned_cols=204 Identities=10% Similarity=-0.003 Sum_probs=119.2
Q ss_pred CccEEEEEEeCCCCeEEcc-ccCcccccccccccccccccCceeEe--CceEEEeccCCC---CCcEEEEEECCCceeee
Q 046902 166 DDVEVEVYSLKTNSWRRIS-NLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSS---TRSVIVAFDLVAEEFYQ 239 (393)
Q Consensus 166 ~~~~~~Vyss~t~~W~~~~-~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~---~~~~il~fD~~~e~~~~ 239 (393)
....+++|+..+++|+.+. .+|... ....+.....+.+ +|.+|.+++... ....+..||+.+.+|+.
T Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~p~~~-------~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~ 482 (695)
T 2zwa_A 410 RVNEILQLSIHYDKIDMKNIEVSSSE-------VPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSM 482 (695)
T ss_dssp BCCCEEEEEECSSCEEEEECCCCCSC-------CCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEE
T ss_pred CcCcEEEEECCCCeEEEeccCCCCCC-------CCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEE
Confidence 3456899999999999987 422100 0022345566788 999999987522 12469999999999999
Q ss_pred ec-CCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCc
Q 046902 240 LP-LPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGV 317 (393)
Q Consensus 240 i~-lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~ 317 (393)
+. +|.... ....+.+ +|+|+++++..... ++|+.+-. ...|+.+...... ..... ....+.+..+.+
T Consensus 483 ~~~~p~~R~------~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~--t~~W~~~~~~g~~-p~~r~-~~~a~v~~~~~~ 551 (695)
T 2zwa_A 483 IKSLSHTRF------RHSACSLPDGNVLILGGVTEGP-AMLLYNVT--EEIFKDVTPKDEF-FQNSL-VSAGLEFDPVSK 551 (695)
T ss_dssp CCCCSBCCB------SCEEEECTTSCEEEECCBCSSC-SEEEEETT--TTEEEECCCSSGG-GGSCC-BSCEEEEETTTT
T ss_pred CCCCCCCcc------cceEEEEcCCEEEEECCCCCCC-CEEEEECC--CCceEEccCCCCC-CCccc-ceeEEEEeCCCC
Confidence 84 554332 2355664 99999998765444 78888742 4679886542100 00111 122233333324
Q ss_pred EEEEEEc--------CcEEEEEECCCCc------EEEEEEecCCCC--eeeeEEEE-eccccCCCCCCCCC-CCCCcccc
Q 046902 318 KLLLEVR--------REKLVWFDLETNS------LRTVKIDTHGLD--FVDTEICM-ASLVPLSDKGGGCG-GGINGMKR 379 (393)
Q Consensus 318 ~i~l~~~--------~~~l~~yd~~t~~------~~~v~~~~~~~~--~~~~~~y~-~SL~~~~~~~~~~~-~~~~~~~~ 379 (393)
.||+... ...+..||+++++ |+.+.-. ...+ ...++.+- ..|+-+........ ...+.++.
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~-p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~ 630 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH-PLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIIS 630 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC-GGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEE
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCC-CCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEE
Confidence 5555431 1359999999999 8877431 1122 34455566 56655543321111 23455555
Q ss_pred ccchHHHhh
Q 046902 380 RNLEEKEKR 388 (393)
Q Consensus 380 ~~~~~~~~~ 388 (393)
-+.+..+|.
T Consensus 631 yd~~t~~W~ 639 (695)
T 2zwa_A 631 LDPLSETLT 639 (695)
T ss_dssp EETTTTEEE
T ss_pred EECCCCeEE
Confidence 555555554
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.07 E-value=2e-05 Score=79.19 Aligned_cols=198 Identities=7% Similarity=0.011 Sum_probs=111.3
Q ss_pred EEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCC-----CCccEEEEEEeCCCCeEEcccc
Q 046902 112 LALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGND-----GDDVEVEVYSLKTNSWRRISNL 186 (393)
Q Consensus 112 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~-----~~~~~~~Vyss~t~~W~~~~~~ 186 (393)
+..++|.+++|..++++| . . .. +..+.+. +=+|+.++...... .....+++|+..+++|+.+..+
T Consensus 168 ~~~~dp~~~~W~~~~~~P--~-~--~~---~~av~~~--~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~ 237 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLP--I-V--PA---AAAIEPT--SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT 237 (656)
T ss_dssp CCCCCTTSCEEEEEEECS--S-C--CS---EEEEETT--TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE
T ss_pred cccCCCCCCeeeeeccCC--C-C--ce---eEEEEec--CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc
Confidence 445689999999888777 2 1 11 1222221 22566665432211 1234789999999999988766
Q ss_pred CcccccccccccccccccCc--eeEeCceEEEeccCCCCCcEEEEEECCCceeeeec-CCCcccccCCceeEEEEEe-CC
Q 046902 187 PRFLRDFYDYLYHSLFRKGY--GVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVGSL-EG 262 (393)
Q Consensus 187 p~~~~~~~~~~~~~~~~~~~--~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~~~-~G 262 (393)
|. ... ..+. .+..+|.+|.+++... ..+..||+.+.+|..+. +|... .....+.+ +|
T Consensus 238 ~~----------~~~-~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~t~~W~~~~~~~~~R------~~~s~~~~~dg 298 (656)
T 1k3i_A 238 VT----------KHD-MFCPGISMDGNGQIVVTGGNDA--KKTSLYDSSSDSWIPGPDMQVAR------GYQSSATMSDG 298 (656)
T ss_dssp EC----------SCC-CSSCEEEECTTSCEEEECSSST--TCEEEEEGGGTEEEECCCCSSCC------SSCEEEECTTS
T ss_pred CC----------CCC-CccccccCCCCCCEEEeCCCCC--CceEEecCcCCceeECCCCCccc------cccceEEecCC
Confidence 51 111 1222 2346899999987522 36999999999999874 44332 23466777 99
Q ss_pred eEEEEEEc-CCC--eEEEEEEeecCCCCCeEEEEEeeCCCCCCC-c-----ceeeEEEEE-eCCcEEEEEEcCcEEEEEE
Q 046902 263 CLCVFRFY-NLV--YVDMWMMKEHAVKESWTKLFSVQEPTPTRS-F-----LFLRPLGYS-RNGVKLLLEVRREKLVWFD 332 (393)
Q Consensus 263 ~L~~~~~~-~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~-~-----~~~~~~~~~-~~g~~i~l~~~~~~l~~yd 332 (393)
+|++++.. ... .-++|+.+- ....|+.+........... . ....+..+. .+| .++.......+..||
T Consensus 299 ~iyv~GG~~~~~~~~~~~e~yd~--~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g-~~~~~~~~~~v~~yd 375 (656)
T 1k3i_A 299 RVFTIGGSWSGGVFEKNGEVYSP--SSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKG-SVFQAGPSTAMNWYY 375 (656)
T ss_dssp CEEEECCCCCSSSCCCCEEEEET--TTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGG-CEEECCSSSEEEEEE
T ss_pred eEEEEeCcccCCcccccceEeCC--CCCcceeCCCccccccccccccceeecCCceEEEECCCC-cEEEecCccceeeee
Confidence 99999873 211 123444442 1367987632111000000 0 000111121 233 233333335699999
Q ss_pred CCCCcEEEE
Q 046902 333 LETNSLRTV 341 (393)
Q Consensus 333 ~~t~~~~~v 341 (393)
+++++|...
T Consensus 376 ~~~~~w~~~ 384 (656)
T 1k3i_A 376 TSGSGDVKS 384 (656)
T ss_dssp CSTTCEEEE
T ss_pred cCCcceeec
Confidence 999997654
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.95 E-value=9e-07 Score=77.67 Aligned_cols=49 Identities=10% Similarity=0.160 Sum_probs=45.0
Q ss_pred CCCCcHHHHHHHhccCCccceeeeeecccchhhhcCChHHHHHHHhccc
Q 046902 2 SKKIPLDIITGIFCRQPVKSLLRFRCVSKTCCSLIDSQDFIKLHLNHSI 50 (393)
Q Consensus 2 ~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~s~~F~~~~~~~~~ 50 (393)
++.||+|++..||+.|++++|+|+.+|||+||.+..++..-+.+..+..
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 4579999999999999999999999999999999999998888877763
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.41 E-value=2.3e-05 Score=71.64 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=36.6
Q ss_pred CCCCcHHHHHHHhccCCccceeeeeecccchhhhcCChH
Q 046902 2 SKKIPLDIITGIFCRQPVKSLLRFRCVSKTCCSLIDSQD 40 (393)
Q Consensus 2 ~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~s~~ 40 (393)
++.||+|++.+||.+||.+++.+++.|||+|+.++.+|.
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 678999999999999999999999999999999987765
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.93 E-value=0.00011 Score=72.59 Aligned_cols=35 Identities=14% Similarity=0.220 Sum_probs=29.5
Q ss_pred CCCCCcHHHHHHHhccCC-ccceeeeeecccchhhh
Q 046902 1 MSKKIPLDIITGIFCRQP-VKSLLRFRCVSKTCCSL 35 (393)
Q Consensus 1 ~~~~LP~Dll~eIL~rLP-~~sl~r~r~VcK~W~~l 35 (393)
+++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 5 ~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 5 IALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred chhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 367899999999999999 99999999999999988
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.73 E-value=0.31 Score=43.81 Aligned_cols=200 Identities=13% Similarity=0.021 Sum_probs=103.4
Q ss_pred eceEEEeeC-----CceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEE
Q 046902 100 NGLIALCNS-----VQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVY 173 (393)
Q Consensus 100 ~GLl~~~~~-----~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vy 173 (393)
+|++.+... ...+.++||.|++... ++... ..........++.++. + ++..... ..-.+.|+
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~--n~~~lg~~~~~i~~~~---~-~lyv~~~------~~~~v~vi 69 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRA--NGFKLGDVAQSMVIRD---G-IGWIVVN------NSHVIFAI 69 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHH--HSSCCBSCEEEEEEET---T-EEEEEEG------GGTEEEEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhh--cCcccCccceEEEEEC---C-EEEEEEc------CCCEEEEE
Confidence 466555542 5679999999998653 21100 0000011123344442 2 3333321 23478899
Q ss_pred EeCCCCe-EEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceee-eecCCCcccccCC
Q 046902 174 SLKTNSW-RRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFY-QLPLPDSVNVSYA 251 (393)
Q Consensus 174 ss~t~~W-~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~ 251 (393)
+..+++- +.++... . ...-.+.-+|.+|..... ...|.++|+.+.+.. .++++........
T Consensus 70 D~~t~~~~~~i~~~~------------~--p~~i~~~~~g~lyv~~~~---~~~v~~iD~~t~~~~~~i~~g~~~~~~~~ 132 (328)
T 3dsm_A 70 DINTFKEVGRITGFT------------S--PRYIHFLSDEKAYVTQIW---DYRIFIINPKTYEITGYIECPDMDMESGS 132 (328)
T ss_dssp ETTTCCEEEEEECCS------------S--EEEEEEEETTEEEEEEBS---CSEEEEEETTTTEEEEEEECTTCCTTTCB
T ss_pred ECcccEEEEEcCCCC------------C--CcEEEEeCCCeEEEEECC---CCeEEEEECCCCeEEEEEEcCCccccCCC
Confidence 9988765 2332111 0 011112257888877522 368999999988765 4666541100001
Q ss_pred ceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC------
Q 046902 252 NVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR------ 325 (393)
Q Consensus 252 ~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~------ 325 (393)
. ..++..+|+|++........+.++-++. . ..+.++.... ...-+.+.++|. +++....
T Consensus 133 p--~~i~~~~~~lyv~~~~~~~~v~viD~~t----~--~~~~~i~~g~------~p~~i~~~~dG~-l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 133 T--EQMVQYGKYVYVNCWSYQNRILKIDTET----D--KVVDELTIGI------QPTSLVMDKYNK-MWTITDGGYEGSP 197 (328)
T ss_dssp C--CCEEEETTEEEEEECTTCCEEEEEETTT----T--EEEEEEECSS------CBCCCEECTTSE-EEEEBCCBCTTCS
T ss_pred c--ceEEEECCEEEEEcCCCCCEEEEEECCC----C--eEEEEEEcCC------CccceEEcCCCC-EEEEECCCccCCc
Confidence 1 1333478899888652233555443321 2 2334444321 122345566765 5555432
Q ss_pred -----cEEEEEECCCCcEE-EEEE
Q 046902 326 -----EKLVWFDLETNSLR-TVKI 343 (393)
Q Consensus 326 -----~~l~~yd~~t~~~~-~v~~ 343 (393)
..++.+|++|+++. .+.+
T Consensus 198 ~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp SCBCCCEEEEEETTTTEEEEEEEC
T ss_pred cccCCceEEEEECCCCeEEEEEec
Confidence 47999999999876 3444
No 28
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.14 Score=46.31 Aligned_cols=196 Identities=12% Similarity=0.122 Sum_probs=99.8
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
+|+....+..+.|||..++....+.... .+......+.+.+..+.-.++... ....+.+|+..++.|.
T Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~~l~s~~-------~dg~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 25 RLATCSSDKTIKIFEVEGETHKLIDTLT-----GHEGPVWRVDWAHPKFGTILASCS-------YDGKVLIWKEENGRWS 92 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEEC-----CCSSCEEEEEECCGGGCSEEEEEE-------TTSCEEEEEEETTEEE
T ss_pred EEEEEECCCcEEEEecCCCcceeeeEec-----CCCCcEEEEEeCCCCCCCEEEEec-------cCCEEEEEEcCCCcee
Confidence 3333334567888887743332222211 011223445555432222333332 2346889999999887
Q ss_pred EccccCcccccccccccccccccCceeEeC----ceEEEeccCCCCCcEEEEEECCCcee-eeecCCCcccccCCceeEE
Q 046902 182 RISNLPRFLRDFYDYLYHSLFRKGYGVLAG----GALHWVSPKSSTRSVIVAFDLVAEEF-YQLPLPDSVNVSYANVHVD 256 (393)
Q Consensus 182 ~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~----G~lyw~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~~ 256 (393)
.+..... +. ..-..+.++ |.+...+.. ...|..+|+.+..- ..+.+.... .. -..
T Consensus 93 ~~~~~~~----------~~--~~v~~~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~----~~-v~~ 152 (379)
T 3jrp_A 93 QIAVHAV----------HS--ASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTTSPIIIDAHA----IG-VNS 152 (379)
T ss_dssp EEEEECC----------CS--SCEEEEEECCGGGCSEEEEEET---TSEEEEEECCTTSCCCEEEEECCT----TC-EEE
T ss_pred EeeeecC----------CC--cceEEEEeCCCCCCCEEEEecC---CCcEEEEecCCCCceeeEEecCCC----Cc-eEE
Confidence 6643321 00 111122222 333333332 35788888876532 111111111 00 112
Q ss_pred EEEe--------------CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeC---CcEE
Q 046902 257 VGSL--------------EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRN---GVKL 319 (393)
Q Consensus 257 l~~~--------------~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~---g~~i 319 (393)
+.-. +|.+.+++..+. .+.||-+... ...|.....+.... ....-+.+.++ +..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~--~~~~~~~~~~~~h~-----~~v~~~~~sp~~~~~~~l 224 (379)
T 3jrp_A 153 ASWAPATIEEDGEHNGTKESRKFVTGGADN-LVKIWKYNSD--AQTYVLESTLEGHS-----DWVRDVAWSPTVLLRSYL 224 (379)
T ss_dssp EEECCCC----------CTTCEEEEEETTS-CEEEEEEETT--TTEEEEEEEECCCS-----SCEEEEEECCCCSSSEEE
T ss_pred EEEcCccccccccccCCCCCCEEEEEeCCC-eEEEEEecCC--CcceeeEEEEeccc-----CcEeEEEECCCCCCCCeE
Confidence 2222 477766666554 8999999852 34576666665321 12345667777 6666
Q ss_pred EEEEcCcEEEEEECCCCc
Q 046902 320 LLEVRREKLVWFDLETNS 337 (393)
Q Consensus 320 ~l~~~~~~l~~yd~~t~~ 337 (393)
+....++.+..||+.+.+
T Consensus 225 ~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 225 ASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp EEEETTSCEEEEEESSTT
T ss_pred EEEeCCCEEEEEeCCCCC
Confidence 666666679999988863
No 29
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.54 E-value=0.44 Score=43.33 Aligned_cols=195 Identities=10% Similarity=0.081 Sum_probs=104.2
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
+|+....+..+.|||..+++....-... .......++.+.|..+. .++ ... ....+.+|+..+...+
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~-~l~-s~~------~d~~i~iwd~~~~~~~ 154 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGM-----GPGDAITGMKFNQFNTN-QLF-VSS------IRGATTLRDFSGSVIQ 154 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCC-----STTCBEEEEEEETTEEE-EEE-EEE------TTTEEEEEETTSCEEE
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecC-----CcCCceeEEEeCCCCCC-EEE-EEe------CCCEEEEEECCCCceE
Confidence 4444445678999999988766543321 11233455666653222 222 222 2457889998876655
Q ss_pred EccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-
Q 046902 182 RISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL- 260 (393)
Q Consensus 182 ~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~- 260 (393)
.+..... .......-...-+|.....+.. ...|..+|+..+....+...... -..+.-.
T Consensus 155 ~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~h~~~-------v~~~~~~~ 214 (383)
T 3ei3_B 155 VFAKTDS----------WDYWYCCVDVSVSRQMLATGDS---TGRLLLLGLDGHEIFKEKLHKAK-------VTHAEFNP 214 (383)
T ss_dssp EEECCCC----------SSCCEEEEEEETTTTEEEEEET---TSEEEEEETTSCEEEEEECSSSC-------EEEEEECS
T ss_pred EEeccCC----------CCCCeEEEEECCCCCEEEEECC---CCCEEEEECCCCEEEEeccCCCc-------EEEEEECC
Confidence 5432210 0000011112224444433332 35799999966555554432211 1123222
Q ss_pred CCe-EEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEe-CCcEEEEEEcCcEEEEEECCCCcE
Q 046902 261 EGC-LCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSR-NGVKLLLEVRREKLVWFDLETNSL 338 (393)
Q Consensus 261 ~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~-~g~~i~l~~~~~~l~~yd~~t~~~ 338 (393)
+|. +.+.+..+. .+.||-+....... ..+..+.... ...-+.+.+ +|..|+....++.+..||+.+.+.
T Consensus 215 ~~~~~l~s~~~d~-~i~iwd~~~~~~~~--~~~~~~~~~~------~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 215 RCDWLMATSSVDA-TVKLWDLRNIKDKN--SYIAEMPHEK------PVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp SCTTEEEEEETTS-EEEEEEGGGCCSTT--CEEEEEECSS------CEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred CCCCEEEEEeCCC-EEEEEeCCCCCccc--ceEEEecCCC------ceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 455 555555444 99999987532112 2333333221 244567778 888887777777899999998653
No 30
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.28 E-value=0.00062 Score=67.23 Aligned_cols=33 Identities=12% Similarity=0.008 Sum_probs=31.4
Q ss_pred CCCcHHHHHHHhccC-Cccceeeeeecccchhhh
Q 046902 3 KKIPLDIITGIFCRQ-PVKSLLRFRCVSKTCCSL 35 (393)
Q Consensus 3 ~~LP~Dll~eIL~rL-P~~sl~r~r~VcK~W~~l 35 (393)
..||+|++.+||++| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 479999999999999 899999999999999987
No 31
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.98 E-value=0.48 Score=48.02 Aligned_cols=196 Identities=12% Similarity=0.123 Sum_probs=100.7
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
+|+....++.+.|||..++....+.... .+.....++.+.+..+.-.++... ....+.+|+..++.|.
T Consensus 23 ~latg~~dg~I~vwd~~~~~~~~~~~l~-----~h~~~V~~l~~s~~~~~~~l~s~s-------~Dg~I~vwd~~~~~~~ 90 (753)
T 3jro_A 23 RLATCSSDKTIKIFEVEGETHKLIDTLT-----GHEGPVWRVDWAHPKFGTILASCS-------YDGKVLIWKEENGRWS 90 (753)
T ss_dssp CEEEEETTTEEEEEEEETTEEEEEEEEC-----CCSSCEEEEEECCTTSCSEEEEEE-------TTSCEEEEEEETTEEE
T ss_pred eEEEEECCCcEEEEecCCCCCccceecc-----CCcCceEEEEecCCCCCCEEEEEe-------CCCeEEEEECCCCccc
Confidence 3333334567888887644333322222 012234456666553223333333 2346889999999887
Q ss_pred EccccCcccccccccccccccccCceeEeC----ceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEE
Q 046902 182 RISNLPRFLRDFYDYLYHSLFRKGYGVLAG----GALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVD 256 (393)
Q Consensus 182 ~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~----G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~ 256 (393)
.+..... +. ..-.++.++ |.+...+.. ...|..+|+.+..-.. ..+.... .. -..
T Consensus 91 ~~~~~~~----------h~--~~V~~v~~sp~~~~~~l~sgs~---dg~I~vwdl~~~~~~~~~~~~~~~----~~-v~~ 150 (753)
T 3jro_A 91 QIAVHAV----------HS--ASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTTSPIIIDAHA----IG-VNS 150 (753)
T ss_dssp EEEEECC----------CS--SCEEEEEECCGGGCSEEEEEET---TSEEEEEECCSSSCCCCEEEECCS----SC-EEE
T ss_pred ccccccC----------CC--CCeEEEEECCCCCCCEEEEEeC---CCcEEEEEeecCCCcceeEeecCC----Cc-eEE
Confidence 6643321 10 111122221 444444332 3578888887652211 1111110 00 112
Q ss_pred EEEe--------------CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeC---CcEE
Q 046902 257 VGSL--------------EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRN---GVKL 319 (393)
Q Consensus 257 l~~~--------------~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~---g~~i 319 (393)
+... +|.+.+++..+. .+.||-+... ...+.....+.... ....-+.+.++ |..+
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg-~I~iwd~~~~--~~~~~~~~~~~~h~-----~~V~~l~~sp~~~~~~~l 222 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESRKFVTGGADN-LVKIWKYNSD--AQTYVLESTLEGHS-----DWVRDVAWSPTVLLRSYL 222 (753)
T ss_dssp EEECCCC---------CGGGCCEEEEETTS-CEEEEEEETT--TTEEEEEEEECCCS-----SCEEEEEECCCCSSSEEE
T ss_pred EEecCcccccccccccCCCCCEEEEEECCC-eEEEEeccCC--cccceeeeeecCCC-----CcEEEEEeccCCCCCCEE
Confidence 2221 466666666544 8999999853 24566666555321 12345667777 6666
Q ss_pred EEEEcCcEEEEEECCCCc
Q 046902 320 LLEVRREKLVWFDLETNS 337 (393)
Q Consensus 320 ~l~~~~~~l~~yd~~t~~ 337 (393)
+....++.+..||+.+++
T Consensus 223 ~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 223 ASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp EEEESSSCEEEEEESSSS
T ss_pred EEEecCCEEEEecCCCCC
Confidence 666666679999998863
No 32
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.79 E-value=0.46 Score=40.75 Aligned_cols=113 Identities=13% Similarity=0.133 Sum_probs=75.8
Q ss_pred EeCceEEEeccCCCCCcEEEEEECCCcee-eeecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCC
Q 046902 209 LAGGALHWVSPKSSTRSVIVAFDLVAEEF-YQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKE 287 (393)
Q Consensus 209 ~~~G~lyw~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~ 287 (393)
+.+|.+|.-.+. .....|..+|+.+.+- ..+++|.... ...+...+++|+++...+. .+|+.+- .
T Consensus 28 ~~~~~LyestG~-~g~S~v~~vD~~tgkv~~~~~l~~~~f------geGi~~~~~~ly~ltw~~~---~v~v~D~----~ 93 (243)
T 3mbr_X 28 YLRGHLYESTGE-TGRSSVRKVDLETGRILQRAEVPPPYF------GAGIVAWRDRLIQLTWRNH---EGFVYDL----A 93 (243)
T ss_dssp EETTEEEEEECC-TTSCEEEEEETTTCCEEEEEECCTTCC------EEEEEEETTEEEEEESSSS---EEEEEET----T
T ss_pred EECCEEEEECCC-CCCceEEEEECCCCCEEEEEeCCCCcc------eeEEEEeCCEEEEEEeeCC---EEEEEEC----C
Confidence 456677665443 2346899999998766 4478876542 2356777999999864433 4455553 2
Q ss_pred CeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcE-EEEEE
Q 046902 288 SWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL-RTVKI 343 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~-~~v~~ 343 (393)
.-.++.+|+... .+.++..+|+.+++...+.++..+|++|.+. +.|.+
T Consensus 94 tl~~~~ti~~~~--------~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 94 TLTPRARFRYPG--------EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp TTEEEEEEECSS--------CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cCcEEEEEeCCC--------CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 356777887642 2456667788888887677899999999664 45554
No 33
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.72 E-value=1.1 Score=40.40 Aligned_cols=198 Identities=12% Similarity=0.029 Sum_probs=97.6
Q ss_pred eeeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 98 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 98 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
+.++.|+....+..+.|||..+++........ . ..+.....++.|.|..+ + ++... ....+.+++.++
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~--~-~~H~~~V~~v~~spdg~-~-l~sgs-------~d~~i~iwd~~~ 158 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETLIVSKFC--K-YEHDDIVSTVSVLSSGT-Q-AVSGS-------KDICIKVWDLAQ 158 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSCEEEEEE--E-ECCSSCEEEEEECTTSS-E-EEEEE-------TTSCEEEEETTT
T ss_pred eCCCeEEEEECCCEEEEEeccCCCceeEeecc--c-cCCCCCEEEEEECCCCC-E-EEEEe-------CCCeEEEEECCC
Confidence 34566666656778999999998754432211 0 01122344566666432 2 22222 234578888877
Q ss_pred CCeEEccccCcccccccccccccccccCceeE--eCce-EEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCce
Q 046902 178 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGA-LHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANV 253 (393)
Q Consensus 178 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~-lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~ 253 (393)
+.= +..+. .+. ..-..+. -+|. +...+.. ...|..+|+.+.+... +..+.... .
T Consensus 159 ~~~--~~~~~----------~h~--~~V~~~~~~~~~~~~l~s~s~---D~~v~iwd~~~~~~~~~~~~~~~~~---~-- 216 (344)
T 4gqb_B 159 QVV--LSSYR----------AHA--AQVTCVAASPHKDSVFLSCSE---DNRILLWDTRCPKPASQIGCSAPGY---L-- 216 (344)
T ss_dssp TEE--EEEEC----------CCS--SCEEEEEECSSCTTEEEEEET---TSCEEEEETTSSSCEEECC----CC---C--
T ss_pred CcE--EEEEc----------CcC--CceEEEEecCCCCCceeeecc---ccccccccccccceeeeeecceeec---c--
Confidence 632 11111 000 0001111 2232 2222222 2468889998765433 33222111 0
Q ss_pred eEEEEE--eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEE-EEcCcEEEE
Q 046902 254 HVDVGS--LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLL-EVRREKLVW 330 (393)
Q Consensus 254 ~~~l~~--~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l-~~~~~~l~~ 330 (393)
...+.. .++.+.+.+..+. .+.||-++.. ..+.++.... ....-+++.++|..++. ...++.+..
T Consensus 217 ~~~~~~~p~~~~~l~sg~~dg-~v~~wd~~~~------~~~~~~~~h~-----~~v~~v~fsp~g~~~lasgs~D~~i~v 284 (344)
T 4gqb_B 217 PTSLAWHPQQSEVFVFGDENG-TVSLVDTKST------SCVLSSAVHS-----QCVTGLVFSPHSVPFLASLSEDCSLAV 284 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTS-EEEEEESCC--------CCEEEECCS-----SCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred ceeeeecCCCCcceEEeccCC-cEEEEECCCC------cEEEEEcCCC-----CCEEEEEEccCCCeEEEEEeCCCeEEE
Confidence 112332 2556666555444 8999976531 2223333211 12345677787755444 455667999
Q ss_pred EECCCCcEEEE
Q 046902 331 FDLETNSLRTV 341 (393)
Q Consensus 331 yd~~t~~~~~v 341 (393)
||.+++++...
T Consensus 285 wd~~~~~~~~~ 295 (344)
T 4gqb_B 285 LDSSLSELFRS 295 (344)
T ss_dssp ECTTCCEEEEE
T ss_pred EECCCCcEEEE
Confidence 99999976544
No 34
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.56 E-value=1.1 Score=39.30 Aligned_cols=197 Identities=11% Similarity=0.057 Sum_probs=102.9
Q ss_pred eeeceEEEeeCCceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeC
Q 046902 98 SCNGLIALCNSVQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLK 176 (393)
Q Consensus 98 s~~GLl~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~ 176 (393)
+.+|-+++...+..+.|||..+++... +.... ..........+.+.+.. . .++... ....+.+|+..
T Consensus 60 ~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~-~-~l~~~~-------~d~~i~~~d~~ 127 (337)
T 1gxr_A 60 SNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLD---CLNRDNYIRSCKLLPDG-C-TLIVGG-------EASTLSIWDLA 127 (337)
T ss_dssp CSSSSEEEEECBSEEEEEETTSTTCCSCSEEEE---CSCTTSBEEEEEECTTS-S-EEEEEE-------SSSEEEEEECC
T ss_pred ecCCcEEEEcCCCeEEEEECCCCCceeeeeccc---ccCCCCcEEEEEEcCCC-C-EEEEEc-------CCCcEEEEECC
Confidence 345544444346789999988765322 11100 00112334556677643 2 222222 23578999998
Q ss_pred CCCeEEccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCce
Q 046902 177 TNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANV 253 (393)
Q Consensus 177 t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~ 253 (393)
++.......+. .+. .....+. -+|.....+.. ...|..+|+.+.+... +..... .
T Consensus 128 ~~~~~~~~~~~----------~~~--~~i~~~~~~~~~~~l~~~~~---dg~v~~~d~~~~~~~~~~~~~~~------~- 185 (337)
T 1gxr_A 128 APTPRIKAELT----------SSA--PACYALAISPDSKVCFSCCS---DGNIAVWDLHNQTLVRQFQGHTD------G- 185 (337)
T ss_dssp CC--EEEEEEE----------CSS--SCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCCSS------C-
T ss_pred CCCcceeeecc----------cCC--CceEEEEECCCCCEEEEEeC---CCcEEEEeCCCCceeeeeecccC------c-
Confidence 88754432221 000 0011111 24544444433 2468899998765433 332111 1
Q ss_pred eEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEE
Q 046902 254 HVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFD 332 (393)
Q Consensus 254 ~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 332 (393)
-..+... +|...++...+. .+.+|-++. ......+.... ...-+.+.++|..++....++.+..||
T Consensus 186 i~~~~~~~~~~~l~~~~~dg-~i~~~d~~~------~~~~~~~~~~~------~v~~~~~s~~~~~l~~~~~~~~i~~~~ 252 (337)
T 1gxr_A 186 ASCIDISNDGTKLWTGGLDN-TVRSWDLRE------GRQLQQHDFTS------QIFSLGYCPTGEWLAVGMESSNVEVLH 252 (337)
T ss_dssp EEEEEECTTSSEEEEEETTS-EEEEEETTT------TEEEEEEECSS------CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eEEEEECCCCCEEEEEecCC-cEEEEECCC------CceEeeecCCC------ceEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 1123332 666666655444 899997763 12333343321 234566778888888887777799999
Q ss_pred CCCCcEEEE
Q 046902 333 LETNSLRTV 341 (393)
Q Consensus 333 ~~t~~~~~v 341 (393)
+++++...+
T Consensus 253 ~~~~~~~~~ 261 (337)
T 1gxr_A 253 VNKPDKYQL 261 (337)
T ss_dssp TTSSCEEEE
T ss_pred CCCCCeEEE
Confidence 999876544
No 35
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.45 E-value=1 Score=38.56 Aligned_cols=201 Identities=11% Similarity=0.019 Sum_probs=99.6
Q ss_pred eeeceEEEeeCCceEEEEeccc-cceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeC
Q 046902 98 SCNGLIALCNSVQELALFNPST-RKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLK 176 (393)
Q Consensus 98 s~~GLl~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~ 176 (393)
+.+|-.++......++++|..+ ++...+.... . ......+.+.|..+ .++.... . ......+.+++..
T Consensus 50 spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~--~----~~~~~~~~~spdg~--~l~~~~~-~--~~~~~~l~~~~~~ 118 (297)
T 2ojh_A 50 SPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGF--A----TICNNDHGISPDGA--LYAISDK-V--EFGKSAIYLLPST 118 (297)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCCSCEECCCTT--C----CCBCSCCEECTTSS--EEEEEEC-T--TTSSCEEEEEETT
T ss_pred CCCCCEEEEEcCCeEEEEeCCCCCCceEecccc--c----cccccceEECCCCC--EEEEEEe-C--CCCcceEEEEECC
Confidence 3345433333466899999999 8776665332 0 01112234455432 2222221 0 1134567777777
Q ss_pred CCCeEEccccCcccccccccccccccccCceeEeCce-EEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeE
Q 046902 177 TNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGA-LHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHV 255 (393)
Q Consensus 177 t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~ 255 (393)
++.-+.+..... .......-+|. +++.... .....|..+|+.+.....+...... ..
T Consensus 119 ~~~~~~~~~~~~--------------~~~~~~spdg~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~-------~~ 176 (297)
T 2ojh_A 119 GGTPRLMTKNLP--------------SYWHGWSPDGKSFTYCGIR-DQVFDIYSMDIDSGVETRLTHGEGR-------ND 176 (297)
T ss_dssp CCCCEECCSSSS--------------EEEEEECTTSSEEEEEEEE-TTEEEEEEEETTTCCEEECCCSSSC-------EE
T ss_pred CCceEEeecCCC--------------ccceEECCCCCEEEEEECC-CCceEEEEEECCCCcceEcccCCCc-------cc
Confidence 766555432220 00001112443 3333322 1224577777776665544322111 11
Q ss_pred EEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC---------
Q 046902 256 DVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR--------- 325 (393)
Q Consensus 256 ~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~--------- 325 (393)
.+.- -+|...++.......+.||.++..+ ... ..+.... .....+.+.++|..|++...+
T Consensus 177 ~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~--~~~---~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 246 (297)
T 2ojh_A 177 GPDYSPDGRWIYFNSSRTGQMQIWRVRVDG--SSV---ERITDSA-----YGDWFPHPSPSGDKVVFVSYDADVFDHPRD 246 (297)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTS--SCE---EECCCCS-----EEEEEEEECTTSSEEEEEEEETTCCSCCSS
T ss_pred cceECCCCCEEEEEecCCCCccEEEECCCC--CCc---EEEecCC-----cccCCeEECCCCCEEEEEEcCCCCCccccc
Confidence 2222 3676555544334488999988422 222 2222111 123345677888877776532
Q ss_pred --cEEEEEECCCCcEEEE
Q 046902 326 --EKLVWFDLETNSLRTV 341 (393)
Q Consensus 326 --~~l~~yd~~t~~~~~v 341 (393)
..++.||+++++.+.+
T Consensus 247 ~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 247 LDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp EEEEEEEEETTSCSCEEE
T ss_pred CceEEEEEecCCCCceee
Confidence 4599999999887666
No 36
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.25 E-value=1.5 Score=38.74 Aligned_cols=192 Identities=6% Similarity=0.010 Sum_probs=101.7
Q ss_pred eceEEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCC
Q 046902 100 NGLIALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTN 178 (393)
Q Consensus 100 ~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~ 178 (393)
.+.+++.. ....+.++|+.|++....-... .... ++.+++..+ .++.... ....+.+|+..++
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~-------~~~~-~~~~s~dg~--~l~~~~~------~~~~i~~~d~~~~ 72 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLG-------YDFV-DTAITSDCS--NVVVTSD------FCQTLVQIETQLE 72 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECC-------CCEE-EEEECSSSC--EEEEEES------TTCEEEEEECSSS
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEcc-------CCcc-eEEEcCCCC--EEEEEeC------CCCeEEEEECCCC
Confidence 34444443 3568999999998875432222 1122 667777554 2333221 2347889999887
Q ss_pred Ce-E-EccccCcccccccccccccccccC-ceeEeCce-EEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCce
Q 046902 179 SW-R-RISNLPRFLRDFYDYLYHSLFRKG-YGVLAGGA-LHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANV 253 (393)
Q Consensus 179 ~W-~-~~~~~p~~~~~~~~~~~~~~~~~~-~~v~~~G~-lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~ 253 (393)
.- . .+.... . ... -.+.-+|. +| ..........|..+|+.+.+... ++.....
T Consensus 73 ~~~~~~~~~~~-------------~-~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~------- 130 (331)
T 3u4y_A 73 PPKVVAIQEGQ-------------S-SMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYDA------- 130 (331)
T ss_dssp SCEEEEEEECS-------------S-CCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTTE-------
T ss_pred ceeEEecccCC-------------C-CccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCCc-------
Confidence 64 1 111100 0 011 12223454 44 43332122289999998776543 3332211
Q ss_pred eEEEEE-eCCe-EEEEEEcCCCeEEEEEEeecCCCCCeEE-EEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEE
Q 046902 254 HVDVGS-LEGC-LCVFRFYNLVYVDMWMMKEHAVKESWTK-LFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLV 329 (393)
Q Consensus 254 ~~~l~~-~~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~-~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~ 329 (393)
..+.. -+|+ |++........+.+|.++..+ ..... ...+... ....-+.+.++|..+++... +..+.
T Consensus 131 -~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g--~~~~~~~~~~~~~------~~~~~~~~spdg~~l~v~~~~~~~v~ 201 (331)
T 3u4y_A 131 -VGIAISPNGNGLILIDRSSANTVRRFKIDADG--VLFDTGQEFISGG------TRPFNITFTPDGNFAFVANLIGNSIG 201 (331)
T ss_dssp -EEEEECTTSSCEEEEEETTTTEEEEEEECTTC--CEEEEEEEEECSS------SSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred -cceEECCCCCEEEEEecCCCceEEEEEECCCC--cEeecCCccccCC------CCccceEECCCCCEEEEEeCCCCeEE
Confidence 12333 2665 666665544239999998533 11111 1222211 12345677788887777653 45799
Q ss_pred EEECCCCcE
Q 046902 330 WFDLETNSL 338 (393)
Q Consensus 330 ~yd~~t~~~ 338 (393)
.||+++++.
T Consensus 202 v~d~~~~~~ 210 (331)
T 3u4y_A 202 ILETQNPEN 210 (331)
T ss_dssp EEECSSTTS
T ss_pred EEECCCCcc
Confidence 999998874
No 37
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.10 E-value=1.9 Score=39.10 Aligned_cols=188 Identities=10% Similarity=0.097 Sum_probs=101.3
Q ss_pred eeec-eEEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEe
Q 046902 98 SCNG-LIALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSL 175 (393)
Q Consensus 98 s~~G-Ll~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss 175 (393)
+.+| .|++.. .+..+.+||+.|++....-... ....++.++|..+ .++.... ....+.+|+.
T Consensus 40 s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~--------~~v~~~~~spdg~--~l~~~~~------~~~~v~v~d~ 103 (391)
T 1l0q_A 40 SPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG--------SSPQGVAVSPDGK--QVYVTNM------ASSTLSVIDT 103 (391)
T ss_dssp CTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS--------SSEEEEEECTTSS--EEEEEET------TTTEEEEEET
T ss_pred CCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC--------CCccceEECCCCC--EEEEEEC------CCCEEEEEEC
Confidence 3344 443443 4568999999998765433222 1334566776543 2322221 2357899999
Q ss_pred CCCCeEEccccCcccccccccccccccccCceeE--eCce-EEEeccCCCCCcEEEEEECCCceeeee-cCCCcccccCC
Q 046902 176 KTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGA-LHWVSPKSSTRSVIVAFDLVAEEFYQL-PLPDSVNVSYA 251 (393)
Q Consensus 176 ~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~-lyw~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~ 251 (393)
.++.-...-... ....++. -+|. +|..... ...|..+|+.+.+.... ......
T Consensus 104 ~~~~~~~~~~~~---------------~~~~~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~~~~~~~~~~~~----- 160 (391)
T 1l0q_A 104 TSNTVAGTVKTG---------------KSPLGLALSPDGKKLYVTNNG---DKTVSVINTVTKAVINTVSVGRSP----- 160 (391)
T ss_dssp TTTEEEEEEECS---------------SSEEEEEECTTSSEEEEEETT---TTEEEEEETTTTEEEEEEECCSSE-----
T ss_pred CCCeEEEEEeCC---------------CCcceEEECCCCCEEEEEeCC---CCEEEEEECCCCcEEEEEecCCCc-----
Confidence 887543221111 0111222 3455 4444332 35899999988765442 322111
Q ss_pred ceeEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE---cCcE
Q 046902 252 NVHVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV---RREK 327 (393)
Q Consensus 252 ~~~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~---~~~~ 327 (393)
..+.. -+|+..++.......+.+|-+.. ...+..+.... ...-+.+.++|..++... .+..
T Consensus 161 ---~~~~~~~dg~~l~~~~~~~~~v~~~d~~~------~~~~~~~~~~~------~~~~~~~~~~g~~l~~~~~~~~~~~ 225 (391)
T 1l0q_A 161 ---KGIAVTPDGTKVYVANFDSMSISVIDTVT------NSVIDTVKVEA------APSGIAVNPEGTKAYVTNVDKYFNT 225 (391)
T ss_dssp ---EEEEECTTSSEEEEEETTTTEEEEEETTT------TEEEEEEECSS------EEEEEEECTTSSEEEEEEECSSCCE
T ss_pred ---ceEEECCCCCEEEEEeCCCCEEEEEECCC------CeEEEEEecCC------CccceEECCCCCEEEEEecCcCCCc
Confidence 12222 25554434434444888887653 23344444321 234466777888888776 3567
Q ss_pred EEEEECCCCcEE
Q 046902 328 LVWFDLETNSLR 339 (393)
Q Consensus 328 l~~yd~~t~~~~ 339 (393)
+..||+++++..
T Consensus 226 v~~~d~~~~~~~ 237 (391)
T 1l0q_A 226 VSMIDTGTNKIT 237 (391)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCeEE
Confidence 999999987644
No 38
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.90 E-value=0.57 Score=40.58 Aligned_cols=113 Identities=15% Similarity=0.134 Sum_probs=73.2
Q ss_pred EeCceEEEeccCCCCCcEEEEEECCCcee-eeecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCC
Q 046902 209 LAGGALHWVSPKSSTRSVIVAFDLVAEEF-YQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKE 287 (393)
Q Consensus 209 ~~~G~lyw~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~ 287 (393)
+.+|.+|.-.+. .....|..+|+.+.+- ..+++|.... ...+...+++|+++...+. .+|+.+- .
T Consensus 50 ~~~~~LyestG~-~g~S~v~~vD~~Tgkv~~~~~l~~~~F------geGit~~g~~ly~ltw~~~---~v~v~D~----~ 115 (262)
T 3nol_A 50 YRNGYFYESTGL-NGRSSIRKVDIESGKTLQQIELGKRYF------GEGISDWKDKIVGLTWKNG---LGFVWNI----R 115 (262)
T ss_dssp EETTEEEEEEEE-TTEEEEEEECTTTCCEEEEEECCTTCC------EEEEEEETTEEEEEESSSS---EEEEEET----T
T ss_pred EECCEEEEECCC-CCCceEEEEECCCCcEEEEEecCCccc------eeEEEEeCCEEEEEEeeCC---EEEEEEC----c
Confidence 457777766543 2235899999998765 4467775432 2356777999999865433 3455553 2
Q ss_pred CeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCc-EEEEEE
Q 046902 288 SWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNS-LRTVKI 343 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~-~~~v~~ 343 (393)
.-..+.+|+... ...++..+|+.+++...+.++..+|++|.+ ...|.+
T Consensus 116 t~~~~~ti~~~~--------eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 116 NLRQVRSFNYDG--------EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp TCCEEEEEECSS--------CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred cCcEEEEEECCC--------CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 345667777632 234555678888887656689999999865 445554
No 39
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.65 E-value=1.7 Score=38.81 Aligned_cols=122 Identities=12% Similarity=0.037 Sum_probs=67.3
Q ss_pred eCceEEEeccCCCCCcEEEEEECCCceeeeecC-CCcccccCCceeEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCC
Q 046902 210 AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPL-PDSVNVSYANVHVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKE 287 (393)
Q Consensus 210 ~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~l-P~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~ 287 (393)
-+|.+|..... .....|..||+.+.+.+.+.. +.... .. ..++. -+|+..++.......+.+|.++..+
T Consensus 49 pdg~l~~~~~~-~~~~~v~~~~~~~g~~~~~~~~~~~~~---~p--~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g--- 119 (347)
T 3hfq_A 49 AKDCLYSVDKE-DDEGGIAAWQIDGQTAHKLNTVVAPGT---PP--AYVAVDEARQLVYSANYHKGTAEVMKIAADG--- 119 (347)
T ss_dssp TTCEEEEEEEE-TTEEEEEEEEEETTEEEEEEEEEEESC---CC--SEEEEETTTTEEEEEETTTTEEEEEEECTTS---
T ss_pred cCCeEEEEEec-CCCceEEEEEecCCcEEEeeeeecCCC---CC--EEEEECCCCCEEEEEeCCCCEEEEEEeCCCC---
Confidence 36887776542 123579999998777766532 21111 11 12333 3666444444344489999997533
Q ss_pred CeEEEEEeeCCCCCC----CcceeeEEEEEeCCcEEEEEEc-CcEEEEEECC-CCcEEEE
Q 046902 288 SWTKLFSVQEPTPTR----SFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLE-TNSLRTV 341 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~----~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd~~-t~~~~~v 341 (393)
....+..+......+ ......-+++.++|. +++... +..+..||++ ++++..+
T Consensus 120 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 120 ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp CEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEe
Confidence 344555554321100 011233467788888 665543 4579999998 6666544
No 40
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.61 E-value=2.5 Score=38.21 Aligned_cols=188 Identities=13% Similarity=0.097 Sum_probs=100.6
Q ss_pred ceEEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC
Q 046902 101 GLIALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS 179 (393)
Q Consensus 101 GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~ 179 (393)
..|++.. ....+.++|+.+++....-... ....++.+++..+ + ++.... ....+.+|+..++.
T Consensus 86 ~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--------~~~~~~~~s~dg~-~-l~~~~~------~~~~v~~~d~~~~~ 149 (391)
T 1l0q_A 86 KQVYVTNMASSTLSVIDTTSNTVAGTVKTG--------KSPLGLALSPDGK-K-LYVTNN------GDKTVSVINTVTKA 149 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECS--------SSEEEEEECTTSS-E-EEEEET------TTTEEEEEETTTTE
T ss_pred CEEEEEECCCCEEEEEECCCCeEEEEEeCC--------CCcceEEECCCCC-E-EEEEeC------CCCEEEEEECCCCc
Confidence 3444444 3468999999998765433222 1234566666543 2 222221 24578899988876
Q ss_pred eEEccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEE
Q 046902 180 WRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVD 256 (393)
Q Consensus 180 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~ 256 (393)
....-... .....+. -+|...+++.. ....|..+|+.+.+... +..... ...
T Consensus 150 ~~~~~~~~---------------~~~~~~~~~~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~--------~~~ 204 (391)
T 1l0q_A 150 VINTVSVG---------------RSPKGIAVTPDGTKVYVANF--DSMSISVIDTVTNSVIDTVKVEAA--------PSG 204 (391)
T ss_dssp EEEEEECC---------------SSEEEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEECSSE--------EEE
T ss_pred EEEEEecC---------------CCcceEEECCCCCEEEEEeC--CCCEEEEEECCCCeEEEEEecCCC--------ccc
Confidence 54321111 0011222 24543333322 23579999998876543 232211 112
Q ss_pred EEEe-CCeEEEEEEc--CCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-cCcEEEEEE
Q 046902 257 VGSL-EGCLCVFRFY--NLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFD 332 (393)
Q Consensus 257 l~~~-~G~L~~~~~~--~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~yd 332 (393)
+... +|...++... ....+.+|-++. ...+..+.... ...-+.+.++|..|++.. .+..+..||
T Consensus 205 ~~~~~~g~~l~~~~~~~~~~~v~~~d~~~------~~~~~~~~~~~------~~~~~~~s~dg~~l~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 205 IAVNPEGTKAYVTNVDKYFNTVSMIDTGT------NKITARIPVGP------DPAGIAVTPDGKKVYVALSFXNTVSVID 272 (391)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEETTT------TEEEEEEECCS------SEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred eEECCCCCEEEEEecCcCCCcEEEEECCC------CeEEEEEecCC------CccEEEEccCCCEEEEEcCCCCEEEEEE
Confidence 2222 5554444432 334888887653 23445555422 123456778888887764 456799999
Q ss_pred CCCCcEEEE
Q 046902 333 LETNSLRTV 341 (393)
Q Consensus 333 ~~t~~~~~v 341 (393)
+++++....
T Consensus 273 ~~~~~~~~~ 281 (391)
T 1l0q_A 273 TATNTITAT 281 (391)
T ss_dssp TTTTEEEEE
T ss_pred CCCCcEEEE
Confidence 999876543
No 41
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.38 E-value=2.4 Score=37.84 Aligned_cols=202 Identities=11% Similarity=0.064 Sum_probs=100.0
Q ss_pred ceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCe
Q 046902 101 GLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSW 180 (393)
Q Consensus 101 GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W 180 (393)
.+|+....+..+.|||..++++..+-... ........+.+.+....-.++... ....+.+|+..++.-
T Consensus 70 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~~~-------~d~~i~v~d~~~~~~ 137 (379)
T 3jrp_A 70 TILASCSYDGKVLIWKEENGRWSQIAVHA-----VHSASVNSVQWAPHEYGPLLLVAS-------SDGKVSVVEFKENGT 137 (379)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEEC-----CCSSCEEEEEECCGGGCSEEEEEE-------TTSEEEEEECCTTSC
T ss_pred CEEEEeccCCEEEEEEcCCCceeEeeeec-----CCCcceEEEEeCCCCCCCEEEEec-------CCCcEEEEecCCCCc
Confidence 34444445678999999998644433222 012234456666653122333322 345788899887632
Q ss_pred EEccccCcccccccccccccccccCceeEe---------------CceEEEeccCCCCCcEEEEEECCCce--eeee-cC
Q 046902 181 RRISNLPRFLRDFYDYLYHSLFRKGYGVLA---------------GGALHWVSPKSSTRSVIVAFDLVAEE--FYQL-PL 242 (393)
Q Consensus 181 ~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---------------~G~lyw~~~~~~~~~~il~fD~~~e~--~~~i-~l 242 (393)
.....+. .+. ..-..+.. +|.+...+.. ...|..+|+.+.. +..+ .+
T Consensus 138 ~~~~~~~----------~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~ 202 (379)
T 3jrp_A 138 TSPIIID----------AHA--IGVNSASWAPATIEEDGEHNGTKESRKFVTGGA---DNLVKIWKYNSDAQTYVLESTL 202 (379)
T ss_dssp CCEEEEE----------CCT--TCEEEEEECCCC----------CTTCEEEEEET---TSCEEEEEEETTTTEEEEEEEE
T ss_pred eeeEEec----------CCC--CceEEEEEcCccccccccccCCCCCCEEEEEeC---CCeEEEEEecCCCcceeeEEEE
Confidence 1110000 000 00001111 3444444332 2468888876543 3332 22
Q ss_pred CCcccccCCceeEEEEEe-C---CeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcE
Q 046902 243 PDSVNVSYANVHVDVGSL-E---GCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVK 318 (393)
Q Consensus 243 P~~~~~~~~~~~~~l~~~-~---G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~ 318 (393)
.... .. -..+.-. + |.+.+....+. .+.||-++... ..+... .+.... ......-+.+.++|..
T Consensus 203 ~~h~----~~-v~~~~~sp~~~~~~~l~s~~~dg-~i~iwd~~~~~--~~~~~~-~~~~~~---~~~~v~~~~~s~~g~~ 270 (379)
T 3jrp_A 203 EGHS----DW-VRDVAWSPTVLLRSYLASVSQDR-TCIIWTQDNEQ--GPWKKT-LLKEEK---FPDVLWRASWSLSGNV 270 (379)
T ss_dssp CCCS----SC-EEEEEECCCCSSSEEEEEEETTS-CEEEEEESSTT--SCCEEE-ESSSSC---CSSCEEEEEECSSSCC
T ss_pred eccc----Cc-EeEEEECCCCCCCCeEEEEeCCC-EEEEEeCCCCC--ccceee-eecccc---CCCcEEEEEEcCCCCE
Confidence 2111 11 1133332 3 66666665544 89999988532 223222 122111 1112345677788887
Q ss_pred EEEEEcCcEEEEEECCC-CcEEEE
Q 046902 319 LLLEVRREKLVWFDLET-NSLRTV 341 (393)
Q Consensus 319 i~l~~~~~~l~~yd~~t-~~~~~v 341 (393)
|+....++.+..||+.+ ++++.+
T Consensus 271 l~~~~~dg~i~iw~~~~~~~~~~~ 294 (379)
T 3jrp_A 271 LALSGGDNKVTLWKENLEGKWEPA 294 (379)
T ss_dssp EEEEESSSSEEEEEEEETTEEEEE
T ss_pred EEEecCCCcEEEEeCCCCCccccc
Confidence 87777777799999984 556665
No 42
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.30 E-value=2.6 Score=37.12 Aligned_cols=199 Identities=14% Similarity=0.010 Sum_probs=99.8
Q ss_pred eEEEeeCCceEEEEec-cccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC-
Q 046902 102 LIALCNSVQELALFNP-STRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS- 179 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP-~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~- 179 (393)
+|+....+..+.+||. .+++...+.... .......+.+.+ +.+ ++... ....+.+|+.++..
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~------~~~~v~~l~~~~--~~~-l~s~~-------~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNE------ANLGICRICKYG--DDK-LIAAS-------WDGLIEVIDPRNYGD 134 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCC------CCSCEEEEEEET--TTE-EEEEE-------TTSEEEEECHHHHTT
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccC------CCCceEEEEeCC--CCE-EEEEc-------CCCeEEEEccccccc
Confidence 4555556778999999 888876665411 112344566777 333 33222 23467788766400
Q ss_pred ------eEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCC-ce--eeeecCCCcccccC
Q 046902 180 ------WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVA-EE--FYQLPLPDSVNVSY 250 (393)
Q Consensus 180 ------W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~-e~--~~~i~lP~~~~~~~ 250 (393)
.+.+..+. . .....++..++.-...+.. ...|..+|+.+ .. ......+...
T Consensus 135 ~~~~~~~~~~~~~~------------~-~~~v~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~---- 194 (342)
T 1yfq_A 135 GVIAVKNLNSNNTK------------V-KNKIFTMDTNSSRLIVGMN---NSQVQWFRLPLCEDDNGTIEESGLKY---- 194 (342)
T ss_dssp BCEEEEESCSSSSS------------S-CCCEEEEEECSSEEEEEES---TTEEEEEESSCCTTCCCEEEECSCSS----
T ss_pred ccccccCCeeeEEe------------e-CCceEEEEecCCcEEEEeC---CCeEEEEECCccccccceeeecCCCC----
Confidence 11111111 0 0111123232222222222 35799999987 33 3333322211
Q ss_pred CceeEEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCC----CCcceeeEEEEEeCCcEEEEEEc
Q 046902 251 ANVHVDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPT----RSFLFLRPLGYSRNGVKLLLEVR 324 (393)
Q Consensus 251 ~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~----~~~~~~~~~~~~~~g~~i~l~~~ 324 (393)
. -..+... +|.+.++...+. .+.||.++..+..........+...... .......-+.+.++|..|+....
T Consensus 195 -~-i~~i~~~~~~~~~l~~~~~dg-~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 271 (342)
T 1yfq_A 195 -Q-IRDVALLPKEQEGYACSSIDG-RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS 271 (342)
T ss_dssp -C-EEEEEECSGGGCEEEEEETTS-EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET
T ss_pred -c-eeEEEECCCCCCEEEEEecCC-cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC
Confidence 1 1233433 567666666544 9999998754111001122222221100 00112345677778887777776
Q ss_pred CcEEEEEECCCCcEE
Q 046902 325 REKLVWFDLETNSLR 339 (393)
Q Consensus 325 ~~~l~~yd~~t~~~~ 339 (393)
++.+..||+++++..
T Consensus 272 dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 272 DGIISCWNLQTRKKI 286 (342)
T ss_dssp TSCEEEEETTTTEEE
T ss_pred CceEEEEcCccHhHh
Confidence 778999999988753
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.16 E-value=0.77 Score=41.50 Aligned_cols=189 Identities=13% Similarity=0.066 Sum_probs=87.1
Q ss_pred CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC-eEEcccc
Q 046902 108 SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS-WRRISNL 186 (393)
Q Consensus 108 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~-W~~~~~~ 186 (393)
.+..+.|||..++.+..+-... .+......+.+.+..+ + ++... ....+.+|+..++. |.....+
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~-~-l~s~s-------~d~~v~vwd~~~~~~~~~~~~~ 96 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFS-----DHDKIVTCVDWAPKSN-R-IVTCS-------QDRNAYVYEKRPDGTWKQTLVL 96 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBC-----CCSSCEEEEEECTTTC-C-EEEEE-------TTSSEEEC------CCCCEEEC
T ss_pred CCCEEEEEEccCCceEEEEEEe-----cCCceEEEEEEeCCCC-E-EEEEe-------CCCeEEEEEcCCCCceeeeeEe
Confidence 4567889999887544443332 1122345566766532 2 22222 23357888888776 5433222
Q ss_pred CcccccccccccccccccCceeEe--CceEEEeccCCCCCcEEEEEECCCce----eeeecCCCcccccCCceeEEEEEe
Q 046902 187 PRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIVAFDLVAEE----FYQLPLPDSVNVSYANVHVDVGSL 260 (393)
Q Consensus 187 p~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~e~----~~~i~lP~~~~~~~~~~~~~l~~~ 260 (393)
. .+. ..-..+.+ +|.....+.. ...|..+|+.+.+ ...+..|.. .. -..+.-.
T Consensus 97 ~----------~~~--~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~h~-----~~-v~~~~~~ 155 (377)
T 3dwl_C 97 L----------RLN--RAATFVRWSPNEDKFAVGSG---ARVISVCYFEQENDWWVSKHLKRPLR-----ST-ILSLDWH 155 (377)
T ss_dssp C----------CCS--SCEEEEECCTTSSCCEEEES---SSCEEECCC-----CCCCEEECSSCC-----SC-EEEEEEC
T ss_pred c----------ccC--CceEEEEECCCCCEEEEEec---CCeEEEEEECCcccceeeeEeecccC-----CC-eEEEEEc
Confidence 1 000 00111111 3433323222 2467888887664 233333211 11 1133322
Q ss_pred -CCeEEEEEEcCCCeEEEEEEeecCC-----CCCe-------EEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcE
Q 046902 261 -EGCLCVFRFYNLVYVDMWMMKEHAV-----KESW-------TKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREK 327 (393)
Q Consensus 261 -~G~L~~~~~~~~~~~~iW~l~~~~~-----~~~W-------~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~ 327 (393)
+|.+.+....+. .+.||-+...+. ...| ..+..+ .......-+.+.++|..|+....++.
T Consensus 156 ~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~sp~~~~l~~~~~d~~ 228 (377)
T 3dwl_C 156 PNNVLLAAGCADR-KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY------PSGGWVHAVGFSPSGNALAYAGHDSS 228 (377)
T ss_dssp TTSSEEEEEESSS-CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC------CCSSSEEEEEECTTSSCEEEEETTTE
T ss_pred CCCCEEEEEeCCC-EEEEEEEEecccCCCccccccccccchhhhhhcc------cCCceEEEEEECCCCCEEEEEeCCCc
Confidence 666666555544 899999853210 1122 122222 11112445677788887777777778
Q ss_pred EEEEECCCCcE
Q 046902 328 LVWFDLETNSL 338 (393)
Q Consensus 328 l~~yd~~t~~~ 338 (393)
+..||+.+++.
T Consensus 229 i~iwd~~~~~~ 239 (377)
T 3dwl_C 229 VTIAYPSAPEQ 239 (377)
T ss_dssp EC-CEECSTTS
T ss_pred EEEEECCCCCC
Confidence 99999998764
No 44
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.15 E-value=3.3 Score=37.80 Aligned_cols=191 Identities=9% Similarity=0.073 Sum_probs=98.7
Q ss_pred eceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC
Q 046902 100 NGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS 179 (393)
Q Consensus 100 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~ 179 (393)
++.++....+..+.|||..+++...+-... .......+.+.+.. .+ ++... ....+.+|+..++.
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~------~~~~v~~v~~s~~~-~~--l~~~~------~dg~i~iwd~~~~~ 167 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETD------ESTYVASVKWSHDG-SF--LSVGL------GNGLVDIYDVESQT 167 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECC------TTCCEEEEEECTTS-SE--EEEEE------TTSCEEEEETTTCC
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecC------CCCCEEEEEECCCC-CE--EEEEC------CCCeEEEEECcCCe
Confidence 344444445778999999999876544332 12234556676633 33 22222 23468899988765
Q ss_pred eEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE
Q 046902 180 WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS 259 (393)
Q Consensus 180 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~ 259 (393)
-... +. .+ ...-..+..+|.+...+.. ...|..+|+....-....+.... .. -..+..
T Consensus 168 ~~~~--~~----------~~--~~~v~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~----~~-v~~~~~ 225 (401)
T 4aez_A 168 KLRT--MA----------GH--QARVGCLSWNRHVLSSGSR---SGAIHHHDVRIANHQIGTLQGHS----SE-VCGLAW 225 (401)
T ss_dssp EEEE--EC----------CC--SSCEEEEEEETTEEEEEET---TSEEEEEETTSSSCEEEEEECCS----SC-EEEEEE
T ss_pred EEEE--ec----------CC--CCceEEEEECCCEEEEEcC---CCCEEEEecccCcceeeEEcCCC----CC-eeEEEE
Confidence 3221 11 00 0111234445654444433 36899999974332221111111 11 112322
Q ss_pred e-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE---cCcEEEEEECCC
Q 046902 260 L-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV---RREKLVWFDLET 335 (393)
Q Consensus 260 ~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~---~~~~l~~yd~~t 335 (393)
. +|.+.+++..+. .+.||-+... .....+.... ....-+.+.+++..++... .++.+..||+.+
T Consensus 226 ~~~~~~l~s~~~d~-~v~iwd~~~~------~~~~~~~~~~-----~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~ 293 (401)
T 4aez_A 226 RSDGLQLASGGNDN-VVQIWDARSS------IPKFTKTNHN-----AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT 293 (401)
T ss_dssp CTTSSEEEEEETTS-CEEEEETTCS------SEEEEECCCS-----SCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT
T ss_pred cCCCCEEEEEeCCC-eEEEccCCCC------CccEEecCCc-----ceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC
Confidence 2 666666665544 8999987641 1222332111 1234567777665555543 356799999988
Q ss_pred CcEE
Q 046902 336 NSLR 339 (393)
Q Consensus 336 ~~~~ 339 (393)
++..
T Consensus 294 ~~~~ 297 (401)
T 4aez_A 294 GARV 297 (401)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 7644
No 45
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.14 E-value=2.7 Score=36.72 Aligned_cols=201 Identities=10% Similarity=0.065 Sum_probs=98.1
Q ss_pred eceEEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCC
Q 046902 100 NGLIALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTN 178 (393)
Q Consensus 100 ~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~ 178 (393)
+|-|+..+ ....++.++|.|++...+..+. ...++.+++..+ ++... ...+.+|+..++
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~---------~~~~i~~~~dG~---l~v~~--------~~~l~~~d~~~g 83 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA---------PVSSVALRQSGG---YVATI--------GTKFCALNWKEQ 83 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSS---------CEEEEEEBTTSS---EEEEE--------TTEEEEEETTTT
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCC---------ceEEEEECCCCC---EEEEE--------CCeEEEEECCCC
Confidence 45555554 4568999999998765543322 124566776544 22211 236888999999
Q ss_pred CeEEccccCcccccccccccccccccCceeEeCceEEEeccCC--------CCCcEEEEEECCCceeeeecCCCcccccC
Q 046902 179 SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS--------STRSVIVAFDLVAEEFYQLPLPDSVNVSY 250 (393)
Q Consensus 179 ~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~--------~~~~~il~fD~~~e~~~~i~lP~~~~~~~ 250 (393)
.++.+...+... .......-.+.-+|.+|+-.... .....|..+|.... ...+. ....
T Consensus 84 ~~~~~~~~~~~~--------~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~--~~~~--- 149 (297)
T 3g4e_A 84 SAVVLATVDNDK--------KNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYF--DQVD--- 149 (297)
T ss_dssp EEEEEEECCTTC--------SSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEE--EEES---
T ss_pred cEEEEEecCCCC--------CCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEe--eccc---
Confidence 887764332100 00001111122368866543211 12357888887532 22211 0110
Q ss_pred CceeEEEEEe-CCe-EEEEEEcCCCeEEEEEEeecCCCCCeEEEEEe-eCCCCCCCcceeeEEEEEeCCcEEEEEE-cCc
Q 046902 251 ANVHVDVGSL-EGC-LCVFRFYNLVYVDMWMMKEHAVKESWTKLFSV-QEPTPTRSFLFLRPLGYSRNGVKLLLEV-RRE 326 (393)
Q Consensus 251 ~~~~~~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~ 326 (393)
. .-.++.. +|+ |+++..... .+.+|.++.. .........+ .... ......-+++.++|. |++.. .+.
T Consensus 150 ~--pngi~~spdg~~lyv~~~~~~-~i~~~~~d~~--~G~~~~~~~~~~~~~---~~~~p~g~~~d~~G~-lwva~~~~~ 220 (297)
T 3g4e_A 150 I--SNGLDWSLDHKIFYYIDSLSY-SVDAFDYDLQ--TGQISNRRSVYKLEK---EEQIPDGMCIDAEGK-LWVACYNGG 220 (297)
T ss_dssp B--EEEEEECTTSCEEEEEEGGGT-EEEEEEECTT--TCCEEEEEEEEECCG---GGCEEEEEEEBTTSC-EEEEEETTT
T ss_pred c--ccceEEcCCCCEEEEecCCCC-cEEEEeccCC--CCcccCcEEEEECCC---CCCCCCeeEECCCCC-EEEEEcCCC
Confidence 0 1123333 554 666654433 5655555311 1223221111 1111 011223355566775 66554 456
Q ss_pred EEEEEECCCCc-EEEEEE
Q 046902 327 KLVWFDLETNS-LRTVKI 343 (393)
Q Consensus 327 ~l~~yd~~t~~-~~~v~~ 343 (393)
.+..||++|++ ...+..
T Consensus 221 ~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 221 RVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp EEEEECTTTCCEEEEEEC
T ss_pred EEEEEcCCCceEEEEEEC
Confidence 79999999765 455544
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.05 E-value=2.9 Score=36.72 Aligned_cols=98 Identities=9% Similarity=0.082 Sum_probs=49.7
Q ss_pred cEEEEEECCCceeee-ecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCC---
Q 046902 225 SVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTP--- 300 (393)
Q Consensus 225 ~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~--- 300 (393)
..|..+|+.+..... +...... ..+....+...++...+ ..+.||-++.. .....+.....
T Consensus 237 g~i~iwd~~~~~~~~~~~~~~~v--------~~~~~~~~~~~~~~~~d-~~i~iwd~~~~------~~~~~~~~~~~~~~ 301 (340)
T 4aow_A 237 GQAMLWDLNEGKHLYTLDGGDII--------NALCFSPNRYWLCAATG-PSIKIWDLEGK------IIVDELKQEVISTS 301 (340)
T ss_dssp CEEEEEETTTTEEEEEEECSSCE--------EEEEECSSSSEEEEEET-TEEEEEETTTT------EEEEEECCC-----
T ss_pred CeEEEEEeccCceeeeecCCceE--------EeeecCCCCceeeccCC-CEEEEEECCCC------eEEEeccccceeee
Confidence 578889988765432 2222111 12333333333333333 38888876521 12222221110
Q ss_pred -CCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCc
Q 046902 301 -TRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNS 337 (393)
Q Consensus 301 -~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~ 337 (393)
........-+++.++|..|+-...++.+..||++|++
T Consensus 302 ~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 302 SKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 0011123446777888877777777789999999875
No 47
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.98 E-value=3.2 Score=36.96 Aligned_cols=196 Identities=8% Similarity=-0.099 Sum_probs=103.3
Q ss_pred eeceEEEee-CCceEEEEeccccce-eccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeC
Q 046902 99 CNGLIALCN-SVQELALFNPSTRKL-KTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLK 176 (393)
Q Consensus 99 ~~GLl~~~~-~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~ 176 (393)
.++.+.+.. ....+.|+|+.|++. ..+|... ...++.+++. . ++..... ....+.+++..
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~---------~p~~i~~~~~--g-~lyv~~~------~~~~v~~iD~~ 113 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFT---------SPRYIHFLSD--E-KAYVTQI------WDYRIFIINPK 113 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCS---------SEEEEEEEET--T-EEEEEEB------SCSEEEEEETT
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCC---------CCcEEEEeCC--C-eEEEEEC------CCCeEEEEECC
Confidence 455555444 346799999999886 4565322 1234555443 2 4544331 13468889988
Q ss_pred CCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeE
Q 046902 177 TNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHV 255 (393)
Q Consensus 177 t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~ 255 (393)
+++-...-..... .........-+..+|.+|..... ....|.++|+.+.+... ++...... .+
T Consensus 114 t~~~~~~i~~g~~--------~~~~~~p~~i~~~~~~lyv~~~~--~~~~v~viD~~t~~~~~~i~~g~~p~------~i 177 (328)
T 3dsm_A 114 TYEITGYIECPDM--------DMESGSTEQMVQYGKYVYVNCWS--YQNRILKIDTETDKVVDELTIGIQPT------SL 177 (328)
T ss_dssp TTEEEEEEECTTC--------CTTTCBCCCEEEETTEEEEEECT--TCCEEEEEETTTTEEEEEEECSSCBC------CC
T ss_pred CCeEEEEEEcCCc--------cccCCCcceEEEECCEEEEEcCC--CCCEEEEEECCCCeEEEEEEcCCCcc------ce
Confidence 8753321111100 00000111122367788776431 13589999999876543 44432221 11
Q ss_pred EEEEeCCeEEEEEEcCCC-------eEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEE
Q 046902 256 DVGSLEGCLCVFRFYNLV-------YVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKL 328 (393)
Q Consensus 256 ~l~~~~G~L~~~~~~~~~-------~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l 328 (393)
. ..-+|+++++...... .-.|++++.. .. +.+.++....- ....-+++.++|+.+|+... .+
T Consensus 178 ~-~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~--t~--~v~~~~~~~~g----~~p~~la~~~d~~~lyv~~~--~v 246 (328)
T 3dsm_A 178 V-MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE--TF--TVEKQFKFKLG----DWPSEVQLNGTRDTLYWINN--DI 246 (328)
T ss_dssp E-ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT--TT--EEEEEEECCTT----CCCEEEEECTTSCEEEEESS--SE
T ss_pred E-EcCCCCEEEEECCCccCCccccCCceEEEEECC--CC--eEEEEEecCCC----CCceeEEEecCCCEEEEEcc--EE
Confidence 1 2237888877643200 1345555531 12 23334443210 12345677777888888644 69
Q ss_pred EEEECCCCcEE
Q 046902 329 VWFDLETNSLR 339 (393)
Q Consensus 329 ~~yd~~t~~~~ 339 (393)
+.+|++++++.
T Consensus 247 ~~~d~~t~~~~ 257 (328)
T 3dsm_A 247 WRMPVEADRVP 257 (328)
T ss_dssp EEEETTCSSCC
T ss_pred EEEECCCCcee
Confidence 99999998763
No 48
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.90 E-value=4 Score=37.76 Aligned_cols=186 Identities=10% Similarity=0.044 Sum_probs=97.9
Q ss_pred ceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcc
Q 046902 110 QELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRF 189 (393)
Q Consensus 110 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~ 189 (393)
..++++|..|++...+.... ....++.+.|..+ +++.... ......+.+++..++..+.+......
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~--------~~~~~~~~spdg~--~la~~~~----~~g~~~i~~~d~~~~~~~~l~~~~~~ 268 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP--------RHNGAPAFSPDGS--KLAFALS----KTGSLNLYVMDLASGQIRQVTDGRSN 268 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS--------SCEEEEEECTTSS--EEEEEEC----TTSSCEEEEEETTTCCEEECCCCSSC
T ss_pred cEEEEEECCCCcEEEeecCC--------CcccCEEEcCCCC--EEEEEEe----cCCCceEEEEECCCCCEEeCcCCCCc
Confidence 47999999999887665433 1234566666533 2332221 11345788899988877665432200
Q ss_pred cccccccccccccccCceeEeCce-EEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE-eCCeEEEE
Q 046902 190 LRDFYDYLYHSLFRKGYGVLAGGA-LHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS-LEGCLCVF 267 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~-~~G~L~~~ 267 (393)
.......-+|. +++.+.. .....|..+|+.+.+...+..... ....+.- -+|+..++
T Consensus 269 -------------~~~~~~spdg~~l~~~s~~-~g~~~i~~~d~~~~~~~~l~~~~~-------~~~~~~~spdG~~l~~ 327 (415)
T 2hqs_A 269 -------------NTEPTWFPDSQNLAFTSDQ-AGRPQVYKVNINGGAPQRITWEGS-------QNQDADVSSDGKFMVM 327 (415)
T ss_dssp -------------EEEEEECTTSSEEEEEECT-TSSCEEEEEETTSSCCEECCCSSS-------EEEEEEECTTSSEEEE
T ss_pred -------------ccceEECCCCCEEEEEECC-CCCcEEEEEECCCCCEEEEecCCC-------cccCeEECCCCCEEEE
Confidence 00111112554 4444322 233578899998876554432211 1112222 26664444
Q ss_pred EEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCc---EEEEEECCCCcEEEE
Q 046902 268 RFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRRE---KLVWFDLETNSLRTV 341 (393)
Q Consensus 268 ~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~---~l~~yd~~t~~~~~v 341 (393)
.........|++++-.. .... .+.... ....+.+.++|..|++...+. .|+.+|++++..+.+
T Consensus 328 ~~~~~g~~~i~~~d~~~--~~~~---~l~~~~------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 328 VSSNGGQQHIAKQDLAT--GGVQ---VLSSTF------LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp EEECSSCEEEEEEETTT--CCEE---ECCCSS------SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred EECcCCceEEEEEECCC--CCEE---EecCCC------CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 43322233444444211 2222 222111 234567788988777765443 699999999988776
No 49
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=93.85 E-value=3.9 Score=37.51 Aligned_cols=192 Identities=15% Similarity=0.105 Sum_probs=102.3
Q ss_pred eeeceEEEee-CCceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEe
Q 046902 98 SCNGLIALCN-SVQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSL 175 (393)
Q Consensus 98 s~~GLl~~~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss 175 (393)
+.+|-+++.. .+..+.+||+.+++... ++... ....++.+++..+ .++.... ....+.+|+.
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~--~l~~~~~------~~~~i~~~d~ 241 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG--------KWSKILLYDPIRD--LVYCSNW------ISEDISVIDR 241 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS--------SSEEEEEEETTTT--EEEEEET------TTTEEEEEET
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC--------CCeeEEEEcCCCC--EEEEEec------CCCcEEEEEC
Confidence 4466555554 35689999998876443 33211 1234566776543 2322221 2347889999
Q ss_pred CCCCeEEccccCcccccccccccccccccCceeE--eCceEEEeccC-CC----CCcEEEEEECCCceeeee-cCCCccc
Q 046902 176 KTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPK-SS----TRSVIVAFDLVAEEFYQL-PLPDSVN 247 (393)
Q Consensus 176 ~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~-~~----~~~~il~fD~~~e~~~~i-~lP~~~~ 247 (393)
+++.....-... . ...++. -+|...+.+.. .. ....|..+|+.+.+.... ..+..
T Consensus 242 ~~~~~~~~~~~~------------~---~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~-- 304 (433)
T 3bws_A 242 KTKLEIRKTDKI------------G---LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN-- 304 (433)
T ss_dssp TTTEEEEECCCC------------S---EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC--
T ss_pred CCCcEEEEecCC------------C---CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC--
Confidence 887543321111 0 011222 24544444432 11 235799999987755432 11111
Q ss_pred ccCCceeEEEEE-eCC-eEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC
Q 046902 248 VSYANVHVDVGS-LEG-CLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR 325 (393)
Q Consensus 248 ~~~~~~~~~l~~-~~G-~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~ 325 (393)
...+.. -+| .|++.... ...+.+|-++. ...+..+.... ...-+++.++|..++.....
T Consensus 305 ------~~~~~~~~~g~~l~~~~~~-~~~v~v~d~~~------~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 305 ------KRHIVSGNTENKIYVSDMC-CSKIEVYDLKE------KKVQKSIPVFD------KPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp ------EEEEEECSSTTEEEEEETT-TTEEEEEETTT------TEEEEEEECSS------SEEEEEECTTSSEEEEEECC
T ss_pred ------cceEEECCCCCEEEEEecC-CCEEEEEECCC------CcEEEEecCCC------CCCeEEEcCCCCEEEEEecC
Confidence 112222 255 45555443 44899997763 23444444321 23456777888878877643
Q ss_pred ---------------cEEEEEECCCCcEEEE
Q 046902 326 ---------------EKLVWFDLETNSLRTV 341 (393)
Q Consensus 326 ---------------~~l~~yd~~t~~~~~v 341 (393)
+.+..||+++++....
T Consensus 366 ~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 366 PNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp CCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred CCccccccccccccceEEEEEECCCCcEEEE
Confidence 3799999999875543
No 50
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.73 E-value=3 Score=35.86 Aligned_cols=203 Identities=10% Similarity=0.083 Sum_probs=102.1
Q ss_pred eeeceEEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeC
Q 046902 98 SCNGLIALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLK 176 (393)
Q Consensus 98 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~ 176 (393)
+.+|-+.+.+ ....+.++||..+....++... ..........++.+++..+ +++..... ....+.+|+..
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~--~~~~~~~~p~~i~~~~~~g--~l~v~~~~-----~~~~i~~~d~~ 108 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECG--KRDSQLLYPNRVAVVRNSG--DIIVTERS-----PTHQIQIYNQY 108 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBS--SSTTCBSSEEEEEEETTTT--EEEEEECG-----GGCEEEEECTT
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccC--CCcccccCceEEEEEcCCC--eEEEEcCC-----CCCEEEEECCC
Confidence 3456665554 3457999998866655555422 1111122345666653333 23322210 13467788843
Q ss_pred CCCeEEccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCcee
Q 046902 177 TNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVH 254 (393)
Q Consensus 177 t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~ 254 (393)
...-+.+.... . ....++. -+|.+|..... ...|..||...+....+..+.... . .
T Consensus 109 g~~~~~~~~~~------------~--~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~g~~~~~~~~~~~~~---~--p 166 (286)
T 1q7f_A 109 GQFVRKFGATI------------L--QHPRGVTVDNKGRIIVVECK---VMRVIIFDQNGNVLHKFGCSKHLE---F--P 166 (286)
T ss_dssp SCEEEEECTTT------------C--SCEEEEEECTTSCEEEEETT---TTEEEEECTTSCEEEEEECTTTCS---S--E
T ss_pred CcEEEEecCcc------------C--CCceEEEEeCCCCEEEEECC---CCEEEEEcCCCCEEEEeCCCCccC---C--c
Confidence 32222221111 0 1112233 36887765432 357999998776666554432221 1 1
Q ss_pred EEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-cCc-EEEEE
Q 046902 255 VDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RRE-KLVWF 331 (393)
Q Consensus 255 ~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~-~l~~y 331 (393)
..++.. +|.|++...... .+.+|-.+ ... +..+.... ......-+++.++|. +++.. .+. .+..|
T Consensus 167 ~~i~~~~~g~l~v~~~~~~-~i~~~~~~-----g~~--~~~~~~~g---~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~ 234 (286)
T 1q7f_A 167 NGVVVNDKQEIFISDNRAH-CVKVFNYE-----GQY--LRQIGGEG---ITNYPIGVGINSNGE-ILIADNHNNFNLTIF 234 (286)
T ss_dssp EEEEECSSSEEEEEEGGGT-EEEEEETT-----CCE--EEEESCTT---TSCSEEEEEECTTCC-EEEEECSSSCEEEEE
T ss_pred EEEEECCCCCEEEEECCCC-EEEEEcCC-----CCE--EEEEccCC---ccCCCcEEEECCCCC-EEEEeCCCCEEEEEE
Confidence 234443 688877665433 77776432 122 22333211 011233456666775 55554 333 79999
Q ss_pred ECCCCcEEEEEE
Q 046902 332 DLETNSLRTVKI 343 (393)
Q Consensus 332 d~~t~~~~~v~~ 343 (393)
|.+++.+..+..
T Consensus 235 ~~~g~~~~~~~~ 246 (286)
T 1q7f_A 235 TQDGQLISALES 246 (286)
T ss_dssp CTTSCEEEEEEE
T ss_pred CCCCCEEEEEcc
Confidence 998887777754
No 51
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.67 E-value=1.4 Score=38.17 Aligned_cols=110 Identities=9% Similarity=0.006 Sum_probs=71.4
Q ss_pred EeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCC
Q 046902 209 LAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKE 287 (393)
Q Consensus 209 ~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~ 287 (393)
+.+|.||.-... ...|..+|+++.+-.. + +|.... .-.+...+++|+++...+. .+|+.+- .
T Consensus 62 ~~~~~Ly~stG~---~g~v~~iD~~Tgkv~~~~-l~~~~F------geGit~~g~~Ly~ltw~~~---~v~V~D~----~ 124 (268)
T 3nok_A 62 FHQGHFFESTGH---QGTLRQLSLESAQPVWME-RLGNIF------AEGLASDGERLYQLTWTEG---LLFTWSG----M 124 (268)
T ss_dssp EETTEEEEEETT---TTEEEECCSSCSSCSEEE-ECTTCC------EEEEEECSSCEEEEESSSC---EEEEEET----T
T ss_pred EECCEEEEEcCC---CCEEEEEECCCCcEEeEE-CCCCcc------eeEEEEeCCEEEEEEccCC---EEEEEEC----C
Confidence 346777766544 2359999999876543 5 665432 2346777899998865433 4556653 2
Q ss_pred CeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcE-EEEEE
Q 046902 288 SWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL-RTVKI 343 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~-~~v~~ 343 (393)
.-+.+.+|+... ...++..+|+.+++...+.++..+|++|.+. +.|.+
T Consensus 125 Tl~~~~ti~~~~--------eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 125 PPQRERTTRYSG--------EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp TTEEEEEEECSS--------CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cCcEEEEEeCCC--------ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 346777777632 2345556788888887667899999999664 45554
No 52
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.50 E-value=0.75 Score=42.87 Aligned_cols=197 Identities=12% Similarity=0.125 Sum_probs=96.4
Q ss_pred ec-eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCC
Q 046902 100 NG-LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTN 178 (393)
Q Consensus 100 ~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~ 178 (393)
++ +|.....+..+.|||..+++...+-... . +.....++.|.|..+.+ ++... ....+.+++.+++
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~---g--H~~~V~~l~f~p~~~~~-l~s~s-------~D~~v~iwd~~~~ 197 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGI---G--AGGSITGLKFNPLNTNQ-FYASS-------MEGTTRLQDFKGN 197 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCC---S--SSCCCCEEEECSSCTTE-EEEEC-------SSSCEEEEETTSC
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEcc---C--CCCCEEEEEEeCCCCCE-EEEEe-------CCCEEEEeeccCC
Confidence 44 5555556778999999988654332221 1 11223456666654443 33221 2235788888776
Q ss_pred CeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEE
Q 046902 179 SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVG 258 (393)
Q Consensus 179 ~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~ 258 (393)
.-+....... .......-...-+|.+...+.. ...|..+|+..+....+..-. ... ..+.
T Consensus 198 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~g~~---dg~i~~wd~~~~~~~~~~~h~------~~v-~~v~ 257 (435)
T 4e54_B 198 ILRVFASSDT----------INIWFCSLDVSASSRMVVTGDN---VGNVILLNMDGKELWNLRMHK------KKV-THVA 257 (435)
T ss_dssp EEEEEECCSS----------CSCCCCCEEEETTTTEEEEECS---SSBEEEEESSSCBCCCSBCCS------SCE-EEEE
T ss_pred ceeEEeccCC----------CCccEEEEEECCCCCEEEEEeC---CCcEeeeccCcceeEEEeccc------ceE-Eeee
Confidence 5544322110 0000011112234554444332 356888998765433332111 111 1233
Q ss_pred Ee-CCe-EEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCC
Q 046902 259 SL-EGC-LCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETN 336 (393)
Q Consensus 259 ~~-~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~ 336 (393)
-. +|. +.+.+.. +..+.||-+......... . ..........-+++.++|..|+....++.+..||+.+.
T Consensus 258 ~~p~~~~~~~s~s~-d~~v~iwd~~~~~~~~~~------~--~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 258 LNPCCDWFLATASV-DQTVKIWDLRQVRGKASF------L--YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp ECTTCSSEEEEEET-TSBCCEEETTTCCSSSCC------S--BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred ecCCCceEEEEecC-cceeeEEecccccccceE------E--EeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 22 444 4444444 348999977642211110 0 00000011233455678887777777777999999886
Q ss_pred cE
Q 046902 337 SL 338 (393)
Q Consensus 337 ~~ 338 (393)
+.
T Consensus 329 ~~ 330 (435)
T 4e54_B 329 DC 330 (435)
T ss_dssp SS
T ss_pred cc
Confidence 53
No 53
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.37 E-value=4 Score=36.19 Aligned_cols=171 Identities=14% Similarity=0.107 Sum_probs=89.6
Q ss_pred EEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeC-CCCeEEccccCcccccccccccccccccCceeEeCce-EEEe
Q 046902 140 FYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLK-TNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGA-LHWV 217 (393)
Q Consensus 140 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~-t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~-lyw~ 217 (393)
..++.++|..+ ++.... ....+.+|+.. ++........... . ......-.+.-+|. +|..
T Consensus 143 ~~~~~~spdg~---l~v~~~------~~~~v~~~~~~~~g~~~~~~~~~~~--------~-g~~p~~~~~spdg~~l~v~ 204 (347)
T 3hfq_A 143 IHYTDLTPDNR---LAVIDL------GSDKVYVYNVSDAGQLSEQSVLTME--------A-GFGPRHLVFSPDGQYAFLA 204 (347)
T ss_dssp EEEEEECTTSC---EEEEET------TTTEEEEEEECTTSCEEEEEEEECC--------T-TCCEEEEEECTTSSEEEEE
T ss_pred ceEEEECCCCc---EEEEeC------CCCEEEEEEECCCCcEEEeeeEEcC--------C-CCCCceEEECCCCCEEEEE
Confidence 45577787655 333221 23478899988 6666544321100 0 00001112234676 5544
Q ss_pred ccCCCCCcEEEEEECC--Cceeeee----cCCCcccccCCceeEEEEE-eCCe-EEEEEEcCCCeEEEEEEeecCCCCCe
Q 046902 218 SPKSSTRSVIVAFDLV--AEEFYQL----PLPDSVNVSYANVHVDVGS-LEGC-LCVFRFYNLVYVDMWMMKEHAVKESW 289 (393)
Q Consensus 218 ~~~~~~~~~il~fD~~--~e~~~~i----~lP~~~~~~~~~~~~~l~~-~~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W 289 (393)
... ...|..||+. +.++..+ ..|.... .......++. -+|+ |++.... ...+.+|.++.. ..+
T Consensus 205 ~~~---~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~i~~spdG~~l~v~~~~-~~~v~v~~~~~~---g~~ 275 (347)
T 3hfq_A 205 GEL---SSQIASLKYDTQTGAFTQLGIVKTIPADYT--AHNGAAAIRLSHDGHFLYVSNRG-YNTLAVFAVTAD---GHL 275 (347)
T ss_dssp ETT---TTEEEEEEEETTTTEEEEEEEEESSCTTCC--SCCEEEEEEECTTSCEEEEEEET-TTEEEEEEECGG---GCE
T ss_pred eCC---CCEEEEEEecCCCCceEEeeeeeecCCCCC--CCCcceeEEECCCCCEEEEEeCC-CCEEEEEEECCC---CcE
Confidence 322 2355555554 4565432 2343221 0111123333 3676 5555443 448999999852 356
Q ss_pred EEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC-cEEEEE--ECCCCcEEEEE
Q 046902 290 TKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR-EKLVWF--DLETNSLRTVK 342 (393)
Q Consensus 290 ~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~y--d~~t~~~~~v~ 342 (393)
..+..+.... ....-+++.++|..|++...+ ..+..| |.++++++.+.
T Consensus 276 ~~~~~~~~~~-----~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 276 TLIQQISTEG-----DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EEEEEEECSS-----SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EEeEEEecCC-----CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 6666666421 123457788899888887643 456666 88899988774
No 54
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=93.24 E-value=3.6 Score=35.28 Aligned_cols=192 Identities=10% Similarity=0.048 Sum_probs=97.6
Q ss_pred EeeeeeceEEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEE
Q 046902 95 VLGSCNGLIALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVY 173 (393)
Q Consensus 95 ~~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vy 173 (393)
+....+|.|.+.. ....++++|| +++...+..+. ......++.+|+.. ++..... ....+.+|
T Consensus 104 i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~------~~~~~~~i~~~~~g---~l~v~~~------~~~~i~~~ 167 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPN------KGSYPSFITLGSDN---ALWFTEN------QNNAIGRI 167 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSS------TTCCEEEEEECTTS---CEEEEET------TTTEEEEE
T ss_pred eEECCCCCEEEEecCCceEEEECC-CCCEEEecCCC------CCCCCceEEEcCCC---CEEEEeC------CCCEEEEE
Confidence 3334467776654 3467999999 77766544322 01223566677653 2222221 23467778
Q ss_pred EeCCCCeEEccccCcccccccccccccccccCceeEe--CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCC
Q 046902 174 SLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYA 251 (393)
Q Consensus 174 ss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 251 (393)
+. ++...... .+. .. ....++.+ +|.+|+.... ...|..||. +.++..+.+|.... .
T Consensus 168 ~~-~g~~~~~~-~~~----------~~--~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~-~g~~~~~~~~~~~~---~ 226 (299)
T 2z2n_A 168 TE-SGDITEFK-IPT----------PA--SGPVGITKGNDDALWFVEII---GNKIGRITT-SGEITEFKIPTPNA---R 226 (299)
T ss_dssp CT-TCCEEEEE-CSS----------TT--CCEEEEEECTTSSEEEEETT---TTEEEEECT-TCCEEEEECSSTTC---C
T ss_pred cC-CCcEEEee-CCC----------CC--CcceeEEECCCCCEEEEccC---CceEEEECC-CCcEEEEECCCCCC---C
Confidence 87 77666542 110 00 11123333 5787665432 357999999 77777766663221 1
Q ss_pred ceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEE
Q 046902 252 NVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVW 330 (393)
Q Consensus 252 ~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ 330 (393)
...+... +|.|++...... .+.+|-. . .. ...+.... ......-+.+ ++| .|++......+..
T Consensus 227 --~~~i~~~~~g~l~v~~~~~~-~i~~~d~--~---g~---~~~~~~~~---~~~~~~~i~~-~~g-~l~v~~~~~~l~~ 290 (299)
T 2z2n_A 227 --PHAITAGAGIDLWFTEWGAN-KIGRLTS--N---NI---IEEYPIQI---KSAEPHGICF-DGE-TIWFAMECDKIGK 290 (299)
T ss_dssp --EEEEEECSTTCEEEEETTTT-EEEEEET--T---TE---EEEEECSS---SSCCEEEEEE-CSS-CEEEEETTTEEEE
T ss_pred --ceeEEECCCCCEEEeccCCc-eEEEECC--C---Cc---eEEEeCCC---CCCccceEEe-cCC-CEEEEecCCcEEE
Confidence 1244443 788877764333 5554432 1 11 12222211 0112334455 555 5777765567999
Q ss_pred EECCCCcEE
Q 046902 331 FDLETNSLR 339 (393)
Q Consensus 331 yd~~t~~~~ 339 (393)
||+++++++
T Consensus 291 ~~~~~~~~~ 299 (299)
T 2z2n_A 291 LTLIKDNME 299 (299)
T ss_dssp EEEC-----
T ss_pred EEcCcccCC
Confidence 999998753
No 55
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=93.21 E-value=4.2 Score=35.91 Aligned_cols=204 Identities=9% Similarity=0.033 Sum_probs=103.0
Q ss_pred eeeceEEEee-CCceEEEEecccccee-ccCCCCCCC-CCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEE
Q 046902 98 SCNGLIALCN-SVQELALFNPSTRKLK-TLPLPPCLV-GFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYS 174 (393)
Q Consensus 98 s~~GLl~~~~-~~~~~~V~NP~T~~~~-~LP~~~~~~-~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vys 174 (393)
..++.+++.. ....+.++|+.|++.. .++...... .........++.+++..+. ++.... . ....+.+|+
T Consensus 98 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~--l~~~~~-~----~~~~i~~~d 170 (353)
T 3vgz_A 98 NTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNT--VYISGI-G----KESVIWVVD 170 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTE--EEEEEE-S----SSCEEEEEE
T ss_pred CCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCE--EEEEec-C----CCceEEEEc
Confidence 3344454444 3568999999998753 343321000 0011123456778876542 222221 0 234688888
Q ss_pred eCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCce
Q 046902 175 LKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANV 253 (393)
Q Consensus 175 s~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~ 253 (393)
..++.=... ++. .......-.+.-+|...+.+.. ...|..+|+.+.+... +..+.... ...
T Consensus 171 ~~~~~~~~~--~~~----------~~~~~~~~~~s~dg~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~---~~~ 232 (353)
T 3vgz_A 171 GGNIKLKTA--IQN----------TGKMSTGLALDSEGKRLYTTNA---DGELITIDTADNKILSRKKLLDDGK---EHF 232 (353)
T ss_dssp TTTTEEEEE--ECC----------CCTTCCCCEEETTTTEEEEECT---TSEEEEEETTTTEEEEEEECCCSSS---CCC
T ss_pred CCCCceEEE--ecC----------CCCccceEEECCCCCEEEEEcC---CCeEEEEECCCCeEEEEEEcCCCCC---Ccc
Confidence 877642211 110 0000111123335554344332 3578899998876543 44432211 111
Q ss_pred eEEEEEe-CCe-EEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-cCcEEEE
Q 046902 254 HVDVGSL-EGC-LCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVW 330 (393)
Q Consensus 254 ~~~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~ 330 (393)
...+... +|+ |++.. .....+.+|-++. .+.+..+.... ..-+.+.++|+.+++.. .+..+..
T Consensus 233 ~~~~~~s~dg~~l~~~~-~~~~~v~~~d~~~------~~~~~~~~~~~-------~~~~~~s~dg~~l~v~~~~~~~v~~ 298 (353)
T 3vgz_A 233 FINISLDTARQRAFITD-SKAAEVLVVDTRN------GNILAKVAAPE-------SLAVLFNPARNEAYVTHRQAGKVSV 298 (353)
T ss_dssp EEEEEEETTTTEEEEEE-SSSSEEEEEETTT------CCEEEEEECSS-------CCCEEEETTTTEEEEEETTTTEEEE
T ss_pred cceEEECCCCCEEEEEe-CCCCEEEEEECCC------CcEEEEEEcCC-------CceEEECCCCCEEEEEECCCCeEEE
Confidence 1123333 454 55554 3334777775542 22334444322 12367788888788776 3567999
Q ss_pred EECCCCcEEE
Q 046902 331 FDLETNSLRT 340 (393)
Q Consensus 331 yd~~t~~~~~ 340 (393)
||+++++...
T Consensus 299 ~d~~~~~~~~ 308 (353)
T 3vgz_A 299 IDAKSYKVVK 308 (353)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCeEEE
Confidence 9999987654
No 56
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.04 E-value=2.8 Score=36.66 Aligned_cols=98 Identities=13% Similarity=0.063 Sum_probs=55.9
Q ss_pred EEEEEECCCceeeeecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCc
Q 046902 226 VIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSF 304 (393)
Q Consensus 226 ~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 304 (393)
.|..+|+.+.+...+.++.... . ...+... +|+..++. ...+.+|-++. ...+..+....
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~---~--~~~~~~s~dg~~l~~~---~~~v~~~d~~~------~~~~~~~~~~~----- 280 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDV---F--YFSTAVNPAKTRAFGA---YNVLESFDLEK------NASIKRVPLPH----- 280 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSS---C--EEEEEECTTSSEEEEE---ESEEEEEETTT------TEEEEEEECSS-----
T ss_pred ceEEEeCCCCCceEeecCCCCC---c--eeeEEECCCCCEEEEe---CCeEEEEECCC------CcCcceecCCC-----
Confidence 5889999987765444322211 1 1122222 55443333 23777776542 23444454321
Q ss_pred ceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEE-EEEE
Q 046902 305 LFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR-TVKI 343 (393)
Q Consensus 305 ~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~-~v~~ 343 (393)
...-+++.++|+.++....+..+..||+++++.. .+..
T Consensus 281 -~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 281 -SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp -CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred -ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 1334677788888888766678999999987643 3433
No 57
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.01 E-value=2.3 Score=38.44 Aligned_cols=198 Identities=12% Similarity=0.011 Sum_probs=89.5
Q ss_pred eeeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 98 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 98 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
+.+|.++....+..+.|||..+++........ ...+.....++.+.|..+ + ++... ....+.+|+.++
T Consensus 103 s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~---~~~h~~~V~~v~~spdg~-~-l~sgs-------~dg~v~iwd~~~ 170 (357)
T 4g56_B 103 VSEKGILVASDSGAVELWEILEKESLLVNKFA---KYEHDDIVKTLSVFSDGT-Q-AVSGG-------KDFSVKVWDLSQ 170 (357)
T ss_dssp ETTTEEEEEETTSCEEEC--------CCCCEE---ECCCSSCEEEEEECSSSS-E-EEEEE-------TTSCEEEEETTT
T ss_pred cCCCCEEEEECCCEEEEeeccccceeEEEeec---cCCCCCCEEEEEECCCCC-E-EEEEe-------CCCeEEEEECCC
Confidence 34555555556678999999998755433322 011122344566666432 2 23222 234578888887
Q ss_pred CCeEEccccCcccccccccccccccccCceeEe--Cce-EEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCce
Q 046902 178 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGA-LHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANV 253 (393)
Q Consensus 178 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~ 253 (393)
+.-... +. .+. ..-.++.+ +|. +...+.. ...|..+|+.+.+... +...... ..
T Consensus 171 ~~~~~~--~~----------~h~--~~v~~v~~s~~~~~~~~s~~~---dg~v~~wd~~~~~~~~~~~~~~~~-----~~ 228 (357)
T 4g56_B 171 KAVLKS--YN----------AHS--SEVNCVAACPGKDTIFLSCGE---DGRILLWDTRKPKPATRIDFCASD-----TI 228 (357)
T ss_dssp TEEEEE--EC----------CCS--SCEEEEEECTTCSSCEEEEET---TSCEEECCTTSSSCBCBCCCTTCC-----SC
T ss_pred CcEEEE--Ec----------CCC--CCEEEEEEccCCCceeeeecc---CCceEEEECCCCceeeeeeecccc-----cc
Confidence 643221 11 000 01111211 222 2222221 2467888887654332 2221111 11
Q ss_pred eEEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEE-EEcCcEEEE
Q 046902 254 HVDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLL-EVRREKLVW 330 (393)
Q Consensus 254 ~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l-~~~~~~l~~ 330 (393)
...+.-. ++.+.++...+ ..+.||-+.... .+..+.... ....-+++.++|..++. ...+..+..
T Consensus 229 v~~v~~sp~~~~~la~g~~d-~~i~~wd~~~~~------~~~~~~~~~-----~~v~~l~~sp~~~~~lasgs~D~~i~i 296 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGDET-GNVSLVNIKNPD------SAQTSAVHS-----QNITGLAYSYHSSPFLASISEDCTVAV 296 (357)
T ss_dssp EEEEEECTTSTTEEEEEESS-SCEEEEESSCGG------GCEEECCCS-----SCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred ccchhhhhcccceEEEeecc-cceeEEECCCCc------EeEEEeccc-----eeEEEEEEcCCCCCEEEEEeCCCEEEE
Confidence 1123322 45565555443 389999876421 112222111 12345667777655444 455567999
Q ss_pred EECCCCcEEEE
Q 046902 331 FDLETNSLRTV 341 (393)
Q Consensus 331 yd~~t~~~~~v 341 (393)
||+++++....
T Consensus 297 wd~~~~~~~~~ 307 (357)
T 4g56_B 297 LDADFSEVFRD 307 (357)
T ss_dssp ECTTSCEEEEE
T ss_pred EECCCCcEeEE
Confidence 99999876543
No 58
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.89 E-value=4.3 Score=35.18 Aligned_cols=111 Identities=13% Similarity=0.055 Sum_probs=71.4
Q ss_pred ceEEEeccCCCCCcEEEEEECCCceee-eecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeE
Q 046902 212 GALHWVSPKSSTRSVIVAFDLVAEEFY-QLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWT 290 (393)
Q Consensus 212 G~lyw~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~ 290 (393)
|.+|..... .....|..+|+.+.+-. .+++|.... ...++..+++|++....+. . +++.+- ..-+
T Consensus 32 g~Lyvstg~-~~~s~v~~iD~~tg~v~~~i~l~~~~f------geGi~~~g~~lyv~t~~~~-~--v~viD~----~t~~ 97 (266)
T 2iwa_A 32 DTLFESTGL-YGRSSVRQVALQTGKVENIHKMDDSYF------GEGLTLLNEKLYQVVWLKN-I--GFIYDR----RTLS 97 (266)
T ss_dssp TEEEEEECS-TTTCEEEEEETTTCCEEEEEECCTTCC------EEEEEEETTEEEEEETTCS-E--EEEEET----TTTE
T ss_pred CeEEEECCC-CCCCEEEEEECCCCCEEEEEecCCCcc------eEEEEEeCCEEEEEEecCC-E--EEEEEC----CCCc
Confidence 677765432 23468999999987654 467765432 2245556888888875433 3 455553 2356
Q ss_pred EEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCc-EEEEEE
Q 046902 291 KLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNS-LRTVKI 343 (393)
Q Consensus 291 ~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~-~~~v~~ 343 (393)
.+.+|+.. . ....++..+|+.+|+...+..+..+|++|.+ ...|.+
T Consensus 98 v~~~i~~g--~-----~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 98 NIKNFTHQ--M-----KDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp EEEEEECC--S-----SSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEEECC--C-----CCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 77777753 1 1235566788888887766789999999966 445544
No 59
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.82 E-value=8.8 Score=38.57 Aligned_cols=191 Identities=10% Similarity=0.030 Sum_probs=98.1
Q ss_pred eec-eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 99 CNG-LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 99 ~~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
.+| +|.....+..+.|||..+++....-... ......+.+.|... .++... ....+.+|+..+
T Consensus 65 ~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~--~l~~~~-------~dg~i~vw~~~~ 128 (814)
T 3mkq_A 65 ARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH-------PDYIRSIAVHPTKP--YVLSGS-------DDLTVKLWNWEN 128 (814)
T ss_dssp GGGTEEEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECSSSS--EEEEEE-------TTSEEEEEEGGG
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEecC-------CCCEEEEEEeCCCC--EEEEEc-------CCCEEEEEECCC
Confidence 344 4555556778999999988754322111 12234556665433 233222 245688998876
Q ss_pred CCeEEccccCcccccccccccccccccCceeEe---CceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCce
Q 046902 178 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANV 253 (393)
Q Consensus 178 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~ 253 (393)
+ |.....+. .+. ..-.++.. +|.....+.. ...|..+|+.+..... +..+... ..
T Consensus 129 ~-~~~~~~~~----------~~~--~~v~~~~~~p~~~~~l~~~~~---dg~v~vwd~~~~~~~~~~~~~~~~-----~v 187 (814)
T 3mkq_A 129 N-WALEQTFE----------GHE--HFVMCVAFNPKDPSTFASGCL---DRTVKVWSLGQSTPNFTLTTGQER-----GV 187 (814)
T ss_dssp T-SEEEEEEE----------CCS--SCEEEEEEETTEEEEEEEEET---TSEEEEEETTCSSCSEEEECCCTT-----CC
T ss_pred C-ceEEEEEc----------CCC--CcEEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCcceeEEecCCCC-----CE
Confidence 5 22211111 000 01112222 3444444332 3578899987654322 2222111 01
Q ss_pred eEEEEEe---CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEE
Q 046902 254 HVDVGSL---EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVW 330 (393)
Q Consensus 254 ~~~l~~~---~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ 330 (393)
. .+.-. +|.+.++...+. .+.+|-++. ......+.... ....-+.+.++|..++....++.+..
T Consensus 188 ~-~~~~~~~~~~~~l~~~~~dg-~i~~~d~~~------~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~dg~v~v 254 (814)
T 3mkq_A 188 N-YVDYYPLPDKPYMITASDDL-TIKIWDYQT------KSCVATLEGHM-----SNVSFAVFHPTLPIIISGSEDGTLKI 254 (814)
T ss_dssp C-EEEECCSTTCCEEEEECTTS-EEEEEETTT------TEEEEEEECCS-----SCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred E-EEEEEECCCCCEEEEEeCCC-EEEEEECCC------CcEEEEEcCCC-----CCEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 1 22222 566655555444 899997653 22334443211 12445677788887777776677999
Q ss_pred EECCCCcEE
Q 046902 331 FDLETNSLR 339 (393)
Q Consensus 331 yd~~t~~~~ 339 (393)
||+.+.+..
T Consensus 255 wd~~~~~~~ 263 (814)
T 3mkq_A 255 WNSSTYKVE 263 (814)
T ss_dssp EETTTCSEE
T ss_pred EECCCCcEE
Confidence 999986644
No 60
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.79 E-value=5.1 Score=35.74 Aligned_cols=185 Identities=12% Similarity=0.164 Sum_probs=92.8
Q ss_pred eeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccc
Q 046902 106 CNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISN 185 (393)
Q Consensus 106 ~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~ 185 (393)
...+..+.|||..++++....... . .+......+.+.|.. .+ ++... ....+.+|+..++.++.+..
T Consensus 34 ~~~D~~i~iw~~~~~~~~~~~~~~--~--~h~~~v~~~~~sp~g-~~-l~s~s-------~D~~v~iw~~~~~~~~~~~~ 100 (345)
T 3fm0_A 34 CGGDRRIRIWGTEGDSWICKSVLS--E--GHQRTVRKVAWSPCG-NY-LASAS-------FDATTCIWKKNQDDFECVTT 100 (345)
T ss_dssp EETTSCEEEEEEETTEEEEEEEEC--S--SCSSCEEEEEECTTS-SE-EEEEE-------TTSCEEEEEECCC-EEEEEE
T ss_pred EcCCCeEEEEEcCCCcceeeeeec--c--ccCCcEEEEEECCCC-CE-EEEEE-------CCCcEEEEEccCCCeEEEEE
Confidence 335667889998887654221111 0 112234456676643 22 32222 23457788888877655433
Q ss_pred cCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCce-eeeec-CCCcccccCCceeEEEEE-e
Q 046902 186 LPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEE-FYQLP-LPDSVNVSYANVHVDVGS-L 260 (393)
Q Consensus 186 ~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~-~~~i~-lP~~~~~~~~~~~~~l~~-~ 260 (393)
+. .+. ..-.++. -+|.+...+.. ...|..+|+.++. ...+. +.... ... ..+.- -
T Consensus 101 ~~----------~h~--~~v~~v~~sp~~~~l~s~s~---D~~v~iwd~~~~~~~~~~~~~~~h~----~~v-~~~~~~p 160 (345)
T 3fm0_A 101 LE----------GHE--NEVKSVAWAPSGNLLATCSR---DKSVWVWEVDEEDEYECVSVLNSHT----QDV-KHVVWHP 160 (345)
T ss_dssp EC----------CCS--SCEEEEEECTTSSEEEEEET---TSCEEEEEECTTSCEEEEEEECCCC----SCE-EEEEECS
T ss_pred cc----------CCC--CCceEEEEeCCCCEEEEEEC---CCeEEEEECCCCCCeEEEEEecCcC----CCe-EEEEECC
Confidence 22 100 0011121 13444333332 2468888876542 22221 11111 111 12222 2
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEEC
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDL 333 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~ 333 (393)
+|.+.+....+. .+.||.++. ..|....++.-.. ....-+.+.++|..|+....++.+..||.
T Consensus 161 ~~~~l~s~s~d~-~i~~w~~~~----~~~~~~~~~~~h~-----~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 161 SQELLASASYDD-TVKLYREEE----DDWVCCATLEGHE-----STVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SSSCEEEEETTS-CEEEEEEET----TEEEEEEEECCCS-----SCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEeCCC-cEEEEEecC----CCEEEEEEecCCC-----CceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 566655555444 899998874 4576666554321 12445677788887777766667888875
No 61
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.49 E-value=6.5 Score=36.26 Aligned_cols=187 Identities=13% Similarity=0.114 Sum_probs=99.9
Q ss_pred ceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcc
Q 046902 110 QELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRF 189 (393)
Q Consensus 110 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~ 189 (393)
..+.++|..++..+.|.... .....+.+.|..+ +++.... +.....+.+++..++..+.+...+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~--------~~v~~~~~Spdg~--~la~~s~----~~~~~~i~~~d~~tg~~~~l~~~~~- 223 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP--------QPLMSPAWSPDGS--KLAYVTF----ESGRSALVIQTLANGAVRQVASFPR- 223 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES--------SCEEEEEECTTSS--EEEEEEC----TTSSCEEEEEETTTCCEEEEECCSS-
T ss_pred ceEEEEcCCCCCCEEEeCCC--------CcceeeEEcCCCC--EEEEEEe----cCCCcEEEEEECCCCcEEEeecCCC-
Confidence 68999998876655554322 1234556666543 3333221 1123578999999988766543220
Q ss_pred cccccccccccccccCceeEeCce-EEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE-eCCeEEEE
Q 046902 190 LRDFYDYLYHSLFRKGYGVLAGGA-LHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS-LEGCLCVF 267 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~-~~G~L~~~ 267 (393)
. .......-+|. +.+.... .....|..+|+.+.+...+...... ...+.- -+|+..++
T Consensus 224 ---------~---~~~~~~spdg~~la~~~~~-~g~~~i~~~d~~~~~~~~l~~~~~~-------~~~~~~spdg~~l~~ 283 (415)
T 2hqs_A 224 ---------H---NGAPAFSPDGSKLAFALSK-TGSLNLYVMDLASGQIRQVTDGRSN-------NTEPTWFPDSQNLAF 283 (415)
T ss_dssp ---------C---EEEEEECTTSSEEEEEECT-TSSCEEEEEETTTCCEEECCCCSSC-------EEEEEECTTSSEEEE
T ss_pred ---------c---ccCEEEcCCCCEEEEEEec-CCCceEEEEECCCCCEEeCcCCCCc-------ccceEECCCCCEEEE
Confidence 0 01111122564 4444332 2235799999988776554321111 112222 26765444
Q ss_pred EEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC---cEEEEEECCCCcEEEE
Q 046902 268 RFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR---EKLVWFDLETNSLRTV 341 (393)
Q Consensus 268 ~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~---~~l~~yd~~t~~~~~v 341 (393)
.........||.++-.+ .. ...+.... ....-+.+.++|+.|++.... ..++.+|+++++.+.+
T Consensus 284 ~s~~~g~~~i~~~d~~~--~~---~~~l~~~~-----~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 284 TSDQAGRPQVYKVNING--GA---PQRITWEG-----SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp EECTTSSCEEEEEETTS--SC---CEECCCSS-----SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred EECCCCCcEEEEEECCC--CC---EEEEecCC-----CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe
Confidence 44433356777776432 11 11222111 123345677899888776543 4799999999988655
No 62
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=92.40 E-value=4.5 Score=34.23 Aligned_cols=188 Identities=10% Similarity=0.062 Sum_probs=95.3
Q ss_pred eeeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 98 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 98 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
..+|-|.+......++++||.++....++... .....++.+|+... ++.... ....+.+|+.++
T Consensus 75 ~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~-------~~~p~~i~~~~~g~---l~v~~~------~~~~i~~~~~~~ 138 (270)
T 1rwi_B 75 DGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDG-------LNYPEGLAVDTQGA---VYVADR------GNNRVVKLAAGS 138 (270)
T ss_dssp CTTCCEEEEETTTEEEEECTTCSCCEECCCCS-------CSSEEEEEECTTCC---EEEEEG------GGTEEEEECTTC
T ss_pred CCCCCEEEEcCCCEEEEEeCCCceEeeeecCC-------cCCCcceEECCCCC---EEEEEC------CCCEEEEEECCC
Confidence 34566665554668999999888766554322 12235677777432 332221 233566776555
Q ss_pred CCeEEccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeE
Q 046902 178 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHV 255 (393)
Q Consensus 178 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~ 255 (393)
.......... . ....++. -+|.+|+.... ...|..||..+............ . ..
T Consensus 139 ~~~~~~~~~~------------~--~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~~~----~--p~ 195 (270)
T 1rwi_B 139 KTQTVLPFTG------------L--NDPDGVAVDNSGNVYVTDTD---NNRVVKLEAESNNQVVLPFTDIT----A--PW 195 (270)
T ss_dssp CSCEECCCCS------------C--CSCCCEEECTTCCEEEEEGG---GTEEEEECTTTCCEEECCCSSCC----S--EE
T ss_pred ceeEeecccc------------C--CCceeEEEeCCCCEEEEECC---CCEEEEEecCCCceEeecccCCC----C--ce
Confidence 4433221100 0 1122333 35887776432 35799999987665443221111 1 12
Q ss_pred EEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-cCcEEEEEEC
Q 046902 256 DVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFDL 333 (393)
Q Consensus 256 ~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~yd~ 333 (393)
.++.. +|.|++...... .+.+|..+ + ..... +.... .....-+++.++|. |++.. .+..+..|++
T Consensus 196 ~i~~d~~g~l~v~~~~~~-~v~~~~~~--~-~~~~~----~~~~~----~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 196 GIAVDEAGTVYVTEHNTN-QVVKLLAG--S-TTSTV----LPFTG----LNTPLAVAVDSDRT-VYVADRGNDRVVKLTS 262 (270)
T ss_dssp EEEECTTCCEEEEETTTS-CEEEECTT--C-SCCEE----CCCCS----CSCEEEEEECTTCC-EEEEEGGGTEEEEECC
T ss_pred EEEECCCCCEEEEECCCC-cEEEEcCC--C-Cccee----eccCC----CCCceeEEECCCCC-EEEEECCCCEEEEEcC
Confidence 34443 678877765433 55554332 1 11111 11111 11233455566776 55554 4457888988
Q ss_pred CCCc
Q 046902 334 ETNS 337 (393)
Q Consensus 334 ~t~~ 337 (393)
..++
T Consensus 263 ~~~~ 266 (270)
T 1rwi_B 263 LEHH 266 (270)
T ss_dssp CGGG
T ss_pred CCcc
Confidence 7654
No 63
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=92.15 E-value=7.2 Score=35.97 Aligned_cols=188 Identities=11% Similarity=0.033 Sum_probs=96.8
Q ss_pred EeeeeeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEE
Q 046902 95 VLGSCNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYS 174 (393)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vys 174 (393)
.++..+.+|+....+..+.|||..+++...--... .....++.+++ + .++... ....+.+|+
T Consensus 178 ~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~l~~~~---~-~l~s~s-------~dg~i~vwd 239 (435)
T 1p22_A 178 CLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHH-------CEAVLHLRFNN---G-MMVTCS-------KDRSIAVWD 239 (435)
T ss_dssp EEECCSSEEEEEETTSCEEEEESSSCCEEEEECCC-------CSCEEEEECCT---T-EEEEEE-------TTSCEEEEE
T ss_pred EEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCC-------CCcEEEEEEcC---C-EEEEee-------CCCcEEEEe
Confidence 33444445555556778999999988754322111 12234455543 2 333322 234688898
Q ss_pred eCCCCeEEc-cccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCc
Q 046902 175 LKTNSWRRI-SNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYAN 252 (393)
Q Consensus 175 s~t~~W~~~-~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~ 252 (393)
..++.-... .... .+ .....++..+|.....+.. ...|..+|+.+.+... +.....
T Consensus 240 ~~~~~~~~~~~~~~----------~~--~~~v~~~~~~~~~l~s~~~---dg~i~vwd~~~~~~~~~~~~~~~------- 297 (435)
T 1p22_A 240 MASPTDITLRRVLV----------GH--RAAVNVVDFDDKYIVSASG---DRTIKVWNTSTCEFVRTLNGHKR------- 297 (435)
T ss_dssp CSSSSCCEEEEEEC----------CC--SSCEEEEEEETTEEEEEET---TSEEEEEETTTCCEEEEEECCSS-------
T ss_pred CCCCCCceeeeEec----------CC--CCcEEEEEeCCCEEEEEeC---CCeEEEEECCcCcEEEEEcCCCC-------
Confidence 877542111 0011 00 0111234445655444433 3579999998765433 221111
Q ss_pred eeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEE
Q 046902 253 VHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFD 332 (393)
Q Consensus 253 ~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 332 (393)
.......+|.+.+++..+. .+.||-+.. ...+.++.... ..+.++.-+++.++....++.+..||
T Consensus 298 -~v~~~~~~~~~l~~g~~dg-~i~iwd~~~------~~~~~~~~~h~-------~~v~~~~~~~~~l~sg~~dg~i~vwd 362 (435)
T 1p22_A 298 -GIACLQYRDRLVVSGSSDN-TIRLWDIEC------GACLRVLEGHE-------ELVRCIRFDNKRIVSGAYDGKIKVWD 362 (435)
T ss_dssp -CEEEEEEETTEEEEEETTS-CEEEEETTT------CCEEEEECCCS-------SCEEEEECCSSEEEEEETTSCEEEEE
T ss_pred -cEEEEEeCCCEEEEEeCCC-eEEEEECCC------CCEEEEEeCCc-------CcEEEEEecCCEEEEEeCCCcEEEEE
Confidence 1122233566666665544 899998763 12334443211 11223333677777777777899999
Q ss_pred CCCCc
Q 046902 333 LETNS 337 (393)
Q Consensus 333 ~~t~~ 337 (393)
+.+.+
T Consensus 363 ~~~~~ 367 (435)
T 1p22_A 363 LVAAL 367 (435)
T ss_dssp HHHHT
T ss_pred CCCCC
Confidence 87654
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=91.95 E-value=5.8 Score=34.51 Aligned_cols=176 Identities=15% Similarity=0.098 Sum_probs=87.8
Q ss_pred eeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccc
Q 046902 106 CNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISN 185 (393)
Q Consensus 106 ~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~ 185 (393)
...+..+.+||..+++....-... ......+.++|.. . .++... ....+.+|+.+++.-...-.
T Consensus 159 ~~~dg~v~~~d~~~~~~~~~~~~~-------~~~i~~~~~~~~~-~-~l~~~~-------~dg~i~~~d~~~~~~~~~~~ 222 (337)
T 1gxr_A 159 CCSDGNIAVWDLHNQTLVRQFQGH-------TDGASCIDISNDG-T-KLWTGG-------LDNTVRSWDLREGRQLQQHD 222 (337)
T ss_dssp EETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEECTTS-S-EEEEEE-------TTSEEEEEETTTTEEEEEEE
T ss_pred EeCCCcEEEEeCCCCceeeeeecc-------cCceEEEEECCCC-C-EEEEEe-------cCCcEEEEECCCCceEeeec
Confidence 334556888888776544321111 1223455666543 2 222222 23468888887764322111
Q ss_pred cCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-CCeE
Q 046902 186 LPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-EGCL 264 (393)
Q Consensus 186 ~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-~G~L 264 (393)
.+ .. ...-...-+|.....+.. ...|..+|+.+.....+..... . -..+.-. +|.+
T Consensus 223 ~~----------~~---v~~~~~s~~~~~l~~~~~---~~~i~~~~~~~~~~~~~~~~~~------~-v~~~~~~~~~~~ 279 (337)
T 1gxr_A 223 FT----------SQ---IFSLGYCPTGEWLAVGME---SSNVEVLHVNKPDKYQLHLHES------C-VLSLKFAYCGKW 279 (337)
T ss_dssp CS----------SC---EEEEEECTTSSEEEEEET---TSCEEEEETTSSCEEEECCCSS------C-EEEEEECTTSSE
T ss_pred CC----------Cc---eEEEEECCCCCEEEEEcC---CCcEEEEECCCCCeEEEcCCcc------c-eeEEEECCCCCE
Confidence 11 00 001011124544444432 3468889998776544332111 1 1123333 6776
Q ss_pred EEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEEC
Q 046902 265 CVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDL 333 (393)
Q Consensus 265 ~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~ 333 (393)
.+....+. .+.+|.++... .+....... ...-+.+.++|..++....++.+..||+
T Consensus 280 l~~~~~dg-~i~~~~~~~~~------~~~~~~~~~------~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 280 FVSTGKDN-LLNAWRTPYGA------SIFQSKESS------SVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEEETTS-EEEEEETTTCC------EEEEEECSS------CEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEecCCC-cEEEEECCCCe------EEEEecCCC------cEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 66555544 89999876421 122222211 2344566778887777777667888875
No 65
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=91.85 E-value=12 Score=37.96 Aligned_cols=178 Identities=15% Similarity=0.064 Sum_probs=97.3
Q ss_pred EEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEe---CceEEEe
Q 046902 141 YGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWV 217 (393)
Q Consensus 141 ~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~ 217 (393)
.++++|...+ +|++... ....++++++....-+.+..-. + ....++.+ +|.|||.
T Consensus 474 ~GLAvD~~~~--~LY~tD~------~~~~I~v~~ldG~~~~~l~~~~------------l--~~P~gIaVDp~~g~LYwt 531 (791)
T 3m0c_C 474 DGLAVDWIHS--NIYWTDS------VLGTVSVADTKGVKRKTLFREN------------G--SKPRAIVVDPVHGFMYWT 531 (791)
T ss_dssp CEEEEETTTT--EEEEEET------TTTEEEEEETTSSSEEEEEECT------------T--CCEEEEEEETTTTEEEEE
T ss_pred ceeeeeecCC--cEEEEec------CCCeEEEEeCCCCeEEEEEeCC------------C--CCcceEEEecCCCCEEEe
Confidence 4677787654 3333221 2447888888765544442111 0 12234554 5899998
Q ss_pred ccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE--eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEe
Q 046902 218 SPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS--LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSV 295 (393)
Q Consensus 218 ~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~--~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i 295 (393)
-.. ....|..+++....-..+.. .... . ...|+. .+|+||++.... -.||+.+-.| ......+
T Consensus 532 D~g--~~~~I~~~~~dG~~~~~lv~-~~l~---~--P~GLavD~~~~~LYwaD~~~---~~I~~~d~dG-~~~~~v~--- 596 (791)
T 3m0c_C 532 DWG--TPAKIKKGGLNGVDIYSLVT-ENIQ---W--PNGITLDLLSGRLYWVDSKL---HSISSIDVNG-GNRKTIL--- 596 (791)
T ss_dssp ECS--SSCEEEEEETTSCCEEEEEC-SSCS---C--EEEEEEETTTTEEEEEETTT---TEEEEEETTS-CSCEEEE---
T ss_pred cCC--CCCeEEEEecCCCceEEEEe-CCCC---C--ceEEEEecCCCeEEEEeCCC---CcEEEEecCC-CceEEEe---
Confidence 543 22579999997654443321 1111 1 123444 489999987543 2566666444 2222221
Q ss_pred eCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEEECCCCcEEEEEEecCCCC-eeeeEEEEecccc
Q 046902 296 QEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTVKIDTHGLD-FVDTEICMASLVP 362 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd~~t~~~~~v~~~~~~~~-~~~~~~y~~SL~~ 362 (393)
.... ....|+++...++.||+... ...|..+|..+++-..+-. .+.. -+.+.+|.+..-+
T Consensus 597 ~~~~-----~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~--~~l~~P~~i~v~h~~~Qp 658 (791)
T 3m0c_C 597 EDEK-----RLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA--ENLLSPEDMVLFHNLTQP 658 (791)
T ss_dssp ECTT-----TTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE--CSCSCCCCEEEESGGGSC
T ss_pred cCCC-----ccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEee--cCCCCceeEeeeccccCC
Confidence 1110 12457777666678888753 3579999987775433323 3443 5566777776644
No 66
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=91.76 E-value=7.4 Score=35.33 Aligned_cols=205 Identities=14% Similarity=0.052 Sum_probs=102.7
Q ss_pred ec-eEEEeeCCceEEEEeccccceeccC-CCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 100 NG-LIALCNSVQELALFNPSTRKLKTLP-LPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 100 ~G-Ll~~~~~~~~~~V~NP~T~~~~~LP-~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
+| +|+....+..+.|||..+++...-. .+..... .+......+.+.|.... .++... ....+.+|+.++
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~-~l~s~~-------~dg~i~iwd~~~ 163 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE-GHTKRVGIVAWHPTAQN-VLLSAG-------CDNVILVWDVGT 163 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTT-EEEEEE-------TTSCEEEEETTT
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec-CCCCeEEEEEECcCCCC-EEEEEc-------CCCEEEEEECCC
Confidence 44 4444445678999999887532210 0000000 11223445666665433 233222 234588999888
Q ss_pred CCeEEccccCcccccccccccccccccCceeEe--CceEEEeccCCCCCcEEEEEECCCceeee-e-cCCCcccccCCce
Q 046902 178 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIVAFDLVAEEFYQ-L-PLPDSVNVSYANV 253 (393)
Q Consensus 178 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i-~lP~~~~~~~~~~ 253 (393)
+.....-... .+. ..-.++.+ +|.....+.. ...|..+|+.+.+... + ...... ..
T Consensus 164 ~~~~~~~~~~----------~~~--~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~-----~~ 223 (402)
T 2aq5_A 164 GAAVLTLGPD----------VHP--DTIYSVDWSRDGALICTSCR---DKRVRVIEPRKGTVVAEKDRPHEGT-----RP 223 (402)
T ss_dssp TEEEEEECTT----------TCC--SCEEEEEECTTSSCEEEEET---TSEEEEEETTTTEEEEEEECSSCSS-----SC
T ss_pred CCccEEEecC----------CCC--CceEEEEECCCCCEEEEEec---CCcEEEEeCCCCceeeeeccCCCCC-----cc
Confidence 7543221001 000 01112222 4544444332 3579999998766433 2 222111 01
Q ss_pred eEEEEEeCCeEEEEEE--cCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-cCcEEEE
Q 046902 254 HVDVGSLEGCLCVFRF--YNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVW 330 (393)
Q Consensus 254 ~~~l~~~~G~L~~~~~--~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~ 330 (393)
......-+|.+.+++. ..+..+.||-+.... .. .....+.... ...-+.+.++|..+++.. .++.+.+
T Consensus 224 ~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~--~~-~~~~~~~~~~------~v~~~~~s~~~~~l~~~g~~dg~i~i 294 (402)
T 2aq5_A 224 VHAVFVSEGKILTTGFSRMSERQVALWDTKHLE--EP-LSLQELDTSS------GVLLPFFDPDTNIVYLCGKGDSSIRY 294 (402)
T ss_dssp CEEEECSTTEEEEEEECTTCCEEEEEEETTBCS--SC-SEEEECCCCS------SCEEEEEETTTTEEEEEETTCSCEEE
T ss_pred eEEEEcCCCcEEEEeccCCCCceEEEEcCcccc--CC-ceEEeccCCC------ceeEEEEcCCCCEEEEEEcCCCeEEE
Confidence 1112223677666663 234489999887522 11 1122222211 234467778888887765 3567999
Q ss_pred EECCCCc--EEEEE
Q 046902 331 FDLETNS--LRTVK 342 (393)
Q Consensus 331 yd~~t~~--~~~v~ 342 (393)
||+.+++ +..+.
T Consensus 295 ~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 295 FEITSEAPFLHYLS 308 (402)
T ss_dssp EEECSSTTCEEEEE
T ss_pred EEecCCCcceEeec
Confidence 9999987 66653
No 67
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=91.68 E-value=7.2 Score=35.02 Aligned_cols=102 Identities=10% Similarity=-0.009 Sum_probs=51.9
Q ss_pred cEEEEEECCCceeeeecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCc
Q 046902 225 SVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSF 304 (393)
Q Consensus 225 ~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 304 (393)
..|..+|+.+.+-........................+...++...+ ..+.+|-+.. ...+..+....
T Consensus 267 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~d~~~------~~~~~~~~~~~----- 334 (408)
T 4a11_B 267 NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG-STIAVYTVYS------GEQITMLKGHY----- 334 (408)
T ss_dssp SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET-TEEEEEETTT------CCEEEEECCCS-----
T ss_pred CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC-CEEEEEECcC------CcceeeeccCC-----
Confidence 56899999876543321111000001111112222222333333333 3888887763 22344443211
Q ss_pred ceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcE
Q 046902 305 LFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 338 (393)
Q Consensus 305 ~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~ 338 (393)
....-+++.++|..|+....++.+..||+++.+.
T Consensus 335 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 335 KTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred CeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 1244577888888787777777899999999764
No 68
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=91.38 E-value=7.5 Score=34.64 Aligned_cols=117 Identities=15% Similarity=0.119 Sum_probs=67.6
Q ss_pred eCceEEEeccCCCCCcEEEEEECCCceeeeec----CCCcccccCCceeEEEEEe-CCeEEEEEEcC-CCeEEEEEEeec
Q 046902 210 AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLP----LPDSVNVSYANVHVDVGSL-EGCLCVFRFYN-LVYVDMWMMKEH 283 (393)
Q Consensus 210 ~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~----lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~-~~~~~iW~l~~~ 283 (393)
-+|...+.... ....|..||+.+.++..+. .|.... . ...+... +|+..++.... ...+.||.++..
T Consensus 220 pdg~~l~v~~~--~~~~v~v~~~~~g~~~~~~~~~~~~~~~~----~-~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~ 292 (361)
T 3scy_A 220 SDGKFAYLINE--IGGTVIAFRYADGMLDEIQTVAADTVNAQ----G-SGDIHLSPDGKYLYASNRLKADGVAIFKVDET 292 (361)
T ss_dssp TTSSEEEEEET--TTCEEEEEEEETTEEEEEEEEESCSSCCC----C-EEEEEECTTSSEEEEEECSSSCEEEEEEECTT
T ss_pred CCCCEEEEEcC--CCCeEEEEEecCCceEEeEEEecCCCCCC----C-cccEEECCCCCEEEEECCCCCCEEEEEEEcCC
Confidence 35653333332 2357889998877665432 232211 1 1233333 77654444444 458999999732
Q ss_pred CCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcE--EEEEECCCCcEEEE
Q 046902 284 AVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REK--LVWFDLETNSLRTV 341 (393)
Q Consensus 284 ~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~--l~~yd~~t~~~~~v 341 (393)
...+..+..+.... ...-+++.++|..|+.... +.. ++.+|+++++++.+
T Consensus 293 --~g~~~~~~~~~~g~------~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 293 --NGTLTKVGYQLTGI------HPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp --TCCEEEEEEEECSS------CCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred --CCcEEEeeEecCCC------CCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 24566666666411 2345778889887888763 344 44478889988776
No 69
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=91.36 E-value=7.4 Score=34.51 Aligned_cols=197 Identities=15% Similarity=0.181 Sum_probs=97.3
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
+|+....+..+.|||..++++..+-... .+.....++.+.+.. .+ ++... ....+.+|+..++.+.
T Consensus 22 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~-~~-l~~~~-------~dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 22 QIAICPNNHEVHIYEKSGNKWVQVHELK-----EHNGQVTGVDWAPDS-NR-IVTCG-------TDRNAYVWTLKGRTWK 87 (372)
T ss_dssp EEEEECSSSEEEEEEEETTEEEEEEEEE-----CCSSCEEEEEEETTT-TE-EEEEE-------TTSCEEEEEEETTEEE
T ss_pred EEEEEeCCCEEEEEeCCCCcEEeeeeec-----CCCCcccEEEEeCCC-CE-EEEEc-------CCCeEEEEECCCCeee
Confidence 3333335678999999888533222211 011234456677643 33 22222 2346889999888776
Q ss_pred EccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCce-e---eeecCCCcccccCCceeE
Q 046902 182 RISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEE-F---YQLPLPDSVNVSYANVHV 255 (393)
Q Consensus 182 ~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~-~---~~i~lP~~~~~~~~~~~~ 255 (393)
....... +. ..-..+. -+|.....+.. ...|..+|+.+.. + ..+..+.. .. -.
T Consensus 88 ~~~~~~~----------~~--~~v~~~~~~~~~~~l~~~~~---d~~v~i~d~~~~~~~~~~~~~~~~~~-----~~-i~ 146 (372)
T 1k8k_C 88 PTLVILR----------IN--RAARCVRWAPNEKKFAVGSG---SRVISICYFEQENDWWVCKHIKKPIR-----ST-VL 146 (372)
T ss_dssp EEEECCC----------CS--SCEEEEEECTTSSEEEEEET---TSSEEEEEEETTTTEEEEEEECTTCC-----SC-EE
T ss_pred eeEEeec----------CC--CceeEEEECCCCCEEEEEeC---CCEEEEEEecCCCcceeeeeeecccC-----CC-ee
Confidence 5432110 00 0011111 23444444332 2456677766543 2 22222211 11 11
Q ss_pred EEEEe-CCeEEEEEEcCCCeEEEEEEeecCC-----CCCe-------EEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEE
Q 046902 256 DVGSL-EGCLCVFRFYNLVYVDMWMMKEHAV-----KESW-------TKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLE 322 (393)
Q Consensus 256 ~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~-----~~~W-------~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~ 322 (393)
.+... +|.+.++...+. .+.+|-+..... ...| ..+..+... .....-+.+.++|..|+..
T Consensus 147 ~~~~~~~~~~l~~~~~dg-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~ 220 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSCDF-KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-----CGWVHGVCFSANGSRVAWV 220 (372)
T ss_dssp EEEECTTSSEEEEEETTS-CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-----SSCEEEEEECSSSSEEEEE
T ss_pred EEEEcCCCCEEEEEcCCC-CEEEEEcccccccccccccccccccchhhheEecCCC-----CCeEEEEEECCCCCEEEEE
Confidence 33332 666666555444 899998642110 0112 222333211 1123456677788888887
Q ss_pred EcCcEEEEEECCCCcEE
Q 046902 323 VRREKLVWFDLETNSLR 339 (393)
Q Consensus 323 ~~~~~l~~yd~~t~~~~ 339 (393)
..++.+..||+++++..
T Consensus 221 ~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 221 SHDSTVCLADADKKMAV 237 (372)
T ss_dssp ETTTEEEEEEGGGTTEE
T ss_pred eCCCEEEEEECCCCcee
Confidence 77778999999887643
No 70
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=91.13 E-value=9.3 Score=35.25 Aligned_cols=188 Identities=12% Similarity=0.067 Sum_probs=100.9
Q ss_pred EeeeeeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEE
Q 046902 95 VLGSCNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYS 174 (393)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vys 174 (393)
.++..+.+++....+..+.|||..+++....-... .....++.+++ ++ ++... ....+.+|+
T Consensus 164 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~~~~~~---~~-l~s~s-------~dg~i~~wd 225 (445)
T 2ovr_B 164 SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH-------TSTVRCMHLHE---KR-VVSGS-------RDATLRVWD 225 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEEET---TE-EEEEE-------TTSEEEEEE
T ss_pred EEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCC-------CCcEEEEEecC---CE-EEEEe-------CCCEEEEEE
Confidence 34444566666666788999999988654321111 11233455553 23 33322 345788999
Q ss_pred eCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCce
Q 046902 175 LKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANV 253 (393)
Q Consensus 175 s~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~ 253 (393)
..++.-... +. . .......+..+|.....+.. ...|..+|+.+.+... +.....
T Consensus 226 ~~~~~~~~~--~~----------~--~~~~v~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~-------- 280 (445)
T 2ovr_B 226 IETGQCLHV--LM----------G--HVAAVRCVQYDGRRVVSGAY---DFMVKVWDPETETCLHTLQGHTN-------- 280 (445)
T ss_dssp SSSCCEEEE--EE----------C--CSSCEEEEEECSSCEEEEET---TSCEEEEEGGGTEEEEEECCCSS--------
T ss_pred CCCCcEEEE--Ec----------C--CcccEEEEEECCCEEEEEcC---CCEEEEEECCCCcEeEEecCCCC--------
Confidence 887643211 11 0 00111234446665555443 3578899988765432 332111
Q ss_pred eEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEEC
Q 046902 254 HVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDL 333 (393)
Q Consensus 254 ~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~ 333 (393)
...-...+|...++...+. .+.+|-+... ..+..+.... ..+.++..+++.++....++.+..||+
T Consensus 281 ~v~~~~~~~~~l~~~~~d~-~i~i~d~~~~------~~~~~~~~~~-------~~v~~~~~~~~~l~~~~~dg~i~vwd~ 346 (445)
T 2ovr_B 281 RVYSLQFDGIHVVSGSLDT-SIRVWDVETG------NCIHTLTGHQ-------SLTSGMELKDNILVSGNADSTVKIWDI 346 (445)
T ss_dssp CEEEEEECSSEEEEEETTS-CEEEEETTTC------CEEEEECCCC-------SCEEEEEEETTEEEEEETTSCEEEEET
T ss_pred ceEEEEECCCEEEEEeCCC-eEEEEECCCC------CEEEEEcCCc-------ccEEEEEEeCCEEEEEeCCCeEEEEEC
Confidence 1122223777766665544 8999987641 2333333211 123344446677777777778999999
Q ss_pred CCCcEE
Q 046902 334 ETNSLR 339 (393)
Q Consensus 334 ~t~~~~ 339 (393)
++++..
T Consensus 347 ~~~~~~ 352 (445)
T 2ovr_B 347 KTGQCL 352 (445)
T ss_dssp TTCCEE
T ss_pred CCCcEE
Confidence 887643
No 71
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=91.08 E-value=6.3 Score=33.26 Aligned_cols=193 Identities=11% Similarity=0.051 Sum_probs=90.8
Q ss_pred EeeeeeceEEE-ee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEE
Q 046902 95 VLGSCNGLIAL-CN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEV 172 (393)
Q Consensus 95 ~~~s~~GLl~~-~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~V 172 (393)
+....+|-|.+ .+ ....+.++|+-++....++... .. ...++.+|+... ++... ....+.+
T Consensus 29 i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~--~~-----~p~~i~~~~~g~---l~v~~-------~~~~i~~ 91 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNG--LY-----QPQGLAVDGAGT---VYVTD-------FNNRVVT 91 (270)
T ss_dssp EEECTTCCEEEEECSSSCEEEEECC-----EECCCCS--CC-----SCCCEEECTTCC---EEEEE-------TTTEEEE
T ss_pred eEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCC--cC-----CcceeEECCCCC---EEEEc-------CCCEEEE
Confidence 33344566655 43 4567889999887766554322 11 123456676432 32222 1236777
Q ss_pred EEeCCCCeEEccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccC
Q 046902 173 YSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSY 250 (393)
Q Consensus 173 yss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~ 250 (393)
|+..++.-..+.... . ....++. -+|.+|+.... ...|..+|..+......... ...
T Consensus 92 ~d~~~~~~~~~~~~~------------~--~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~~~~~~~-~~~--- 150 (270)
T 1rwi_B 92 LAAGSNNQTVLPFDG------------L--NYPEGLAVDTQGAVYVADRG---NNRVVKLAAGSKTQTVLPFT-GLN--- 150 (270)
T ss_dssp ECTTCSCCEECCCCS------------C--SSEEEEEECTTCCEEEEEGG---GTEEEEECTTCCSCEECCCC-SCC---
T ss_pred EeCCCceEeeeecCC------------c--CCCcceEECCCCCEEEEECC---CCEEEEEECCCceeEeeccc-cCC---
Confidence 877665444332111 0 1112233 36787776432 35788888766544332211 110
Q ss_pred CceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEE
Q 046902 251 ANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKL 328 (393)
Q Consensus 251 ~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l 328 (393)
. ...++.. +|+|++...... .+.+|-.+ + .. ... ..... .....-+++.++| .+++... +..+
T Consensus 151 ~--p~~i~~~~~g~l~v~~~~~~-~i~~~~~~--~-~~---~~~-~~~~~----~~~p~~i~~d~~g-~l~v~~~~~~~v 215 (270)
T 1rwi_B 151 D--PDGVAVDNSGNVYVTDTDNN-RVVKLEAE--S-NN---QVV-LPFTD----ITAPWGIAVDEAG-TVYVTEHNTNQV 215 (270)
T ss_dssp S--CCCEEECTTCCEEEEEGGGT-EEEEECTT--T-CC---EEE-CCCSS----CCSEEEEEECTTC-CEEEEETTTSCE
T ss_pred C--ceeEEEeCCCCEEEEECCCC-EEEEEecC--C-Cc---eEe-ecccC----CCCceEEEECCCC-CEEEEECCCCcE
Confidence 1 1123333 688777765433 55554332 1 11 111 11111 1123345555666 5666653 4569
Q ss_pred EEEECCCCcEEE
Q 046902 329 VWFDLETNSLRT 340 (393)
Q Consensus 329 ~~yd~~t~~~~~ 340 (393)
..||++++....
T Consensus 216 ~~~~~~~~~~~~ 227 (270)
T 1rwi_B 216 VKLLAGSTTSTV 227 (270)
T ss_dssp EEECTTCSCCEE
T ss_pred EEEcCCCCccee
Confidence 999998876544
No 72
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=91.05 E-value=8.4 Score=34.63 Aligned_cols=196 Identities=9% Similarity=0.087 Sum_probs=97.4
Q ss_pred EeeeeeceEEEeeCCceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEE
Q 046902 95 VLGSCNGLIALCNSVQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVY 173 (393)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vy 173 (393)
.....+|.|.+......++.+|+.|++.+. .+... ... ....+ + +. +|+... ....+..|
T Consensus 98 ~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~---~~~-~~p~~----~---~~-~v~v~~-------~~g~l~~~ 158 (376)
T 3q7m_A 98 GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG---EAL-SRPVV----S---DG-LVLIHT-------SNGQLQAL 158 (376)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSS---CCC-SCCEE----E---TT-EEEEEC-------TTSEEEEE
T ss_pred CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC---ceE-cCCEE----E---CC-EEEEEc-------CCCeEEEE
Confidence 345567888887666789999999987442 11111 000 01111 1 11 333221 23467888
Q ss_pred EeCCCC--eEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCce--eee-ecCCCcccc
Q 046902 174 SLKTNS--WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEE--FYQ-LPLPDSVNV 248 (393)
Q Consensus 174 ss~t~~--W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~--~~~-i~lP~~~~~ 248 (393)
+..++. |+.-...+. ........++..+|.+|.-.. ...|.++|..+.+ |+. ...|.....
T Consensus 159 d~~tG~~~W~~~~~~~~----------~~~~~~~~~~~~~~~v~~g~~----~g~l~~~d~~tG~~~w~~~~~~~~~~~~ 224 (376)
T 3q7m_A 159 NEADGAVKWTVNLDMPS----------LSLRGESAPTTAFGAAVVGGD----NGRVSAVLMEQGQMIWQQRISQATGSTE 224 (376)
T ss_dssp ETTTCCEEEEEECCC---------------CCCCCCEEETTEEEECCT----TTEEEEEETTTCCEEEEEECCC------
T ss_pred ECCCCcEEEEEeCCCCc----------eeecCCCCcEEECCEEEEEcC----CCEEEEEECCCCcEEEEEecccCCCCcc
Confidence 887774 876532220 001112345667888776433 2589999997654 443 222321100
Q ss_pred --cCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCc
Q 046902 249 --SYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRRE 326 (393)
Q Consensus 249 --~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~ 326 (393)
............+|.+++..... .+. .++-...+..|... ... ...| .+ +++.|++...+.
T Consensus 225 ~~~~~~~~~~p~~~~~~v~~~~~~g--~l~--~~d~~tG~~~w~~~----~~~------~~~~-~~--~~~~l~~~~~~g 287 (376)
T 3q7m_A 225 IDRLSDVDTTPVVVNGVVFALAYNG--NLT--ALDLRSGQIMWKRE----LGS------VNDF-IV--DGNRIYLVDQND 287 (376)
T ss_dssp -----CCCCCCEEETTEEEEECTTS--CEE--EEETTTCCEEEEEC----CCC------EEEE-EE--ETTEEEEEETTC
T ss_pred cccccccCCCcEEECCEEEEEecCc--EEE--EEECCCCcEEeecc----CCC------CCCc-eE--ECCEEEEEcCCC
Confidence 00000112234577777665322 332 33321113346532 111 1122 22 356788887766
Q ss_pred EEEEEECCCCcEEE
Q 046902 327 KLVWFDLETNSLRT 340 (393)
Q Consensus 327 ~l~~yd~~t~~~~~ 340 (393)
.++.+|++|++...
T Consensus 288 ~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 288 RVMALTIDGGVTLW 301 (376)
T ss_dssp CEEEEETTTCCEEE
T ss_pred eEEEEECCCCcEEE
Confidence 79999999998654
No 73
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=90.83 E-value=5.8 Score=34.81 Aligned_cols=56 Identities=7% Similarity=0.245 Sum_probs=34.6
Q ss_pred CCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCC----cEEEEEEcCcEEEEEECCC
Q 046902 272 LVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNG----VKLLLEVRREKLVWFDLET 335 (393)
Q Consensus 272 ~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g----~~i~l~~~~~~l~~yd~~t 335 (393)
+..+.||-++. ...|.....+.-.. ....-+++.+++ ..|+-...++.+..||+++
T Consensus 188 D~~v~lWd~~~---~~~~~~~~~l~~h~-----~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 188 DNLIKLWKEEE---DGQWKEEQKLEAHS-----DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp TSBCCEEEECT---TSCEEEEECCBCCS-----SCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCeEEEEEeCC---CCccceeeecccCC-----CceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 44899998863 24577665443211 123445666654 4566666677899999876
No 74
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.77 E-value=9.7 Score=34.87 Aligned_cols=199 Identities=12% Similarity=0.075 Sum_probs=95.4
Q ss_pred eeeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 98 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 98 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
|.+++|... .+..++|||..|++...+-... .+.....++.|.+.. .|-+ .+. ....+.+|+..+
T Consensus 114 S~~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~-----~~~~~V~sv~fspdg-~~la--sgs------~Dg~v~iWd~~~ 178 (420)
T 4gga_A 114 SSGNVLAVA-LDNSVYLWSASSGDILQLLQME-----QPGEYISSVAWIKEG-NYLA--VGT------SSAEVQLWDVQQ 178 (420)
T ss_dssp CTTSEEEEE-ETTEEEEEETTTCCEEEEEECC-----STTCCEEEEEECTTS-SEEE--EEE------TTSCEEEEETTT
T ss_pred CCCCEEEEE-eCCEEEEEECCCCCEEEEEEec-----CCCCcEEEEEECCCC-CEEE--EEE------CCCeEEEEEcCC
Confidence 456666554 3678999999999876654332 112234456676643 3322 222 234688999887
Q ss_pred CCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEE
Q 046902 178 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDV 257 (393)
Q Consensus 178 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l 257 (393)
+.-. ..+. .+ .....++..+|.+-..+.. ...+..+|..........+.... .......
T Consensus 179 ~~~~--~~~~----------~h--~~~v~~~s~~~~~l~sgs~---d~~i~~~d~~~~~~~~~~~~~h~----~~~~~~~ 237 (420)
T 4gga_A 179 QKRL--RNMT----------SH--SARVGSLSWNSYILSSGSR---SGHIHHHDVRVAEHHVATLSGHS----QEVCGLR 237 (420)
T ss_dssp TEEE--EEEC----------CC--SSCEEEEEEETTEEEEEET---TSEEEEEETTSSSCEEEEEECCS----SCEEEEE
T ss_pred CcEE--EEEe----------CC--CCceEEEeeCCCEEEEEeC---CCceeEeeecccceeeEEecccc----cceeeee
Confidence 6421 1111 00 0112234455554433332 35677788765443332222111 1111122
Q ss_pred EEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCC-cEEEEEE--cCcEEEEEECC
Q 046902 258 GSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNG-VKLLLEV--RREKLVWFDLE 334 (393)
Q Consensus 258 ~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g-~~i~l~~--~~~~l~~yd~~ 334 (393)
...+|...+....+. .+.||-+.... ..+..+....... .....+++.+++ ..+.... .++.+..||+.
T Consensus 238 ~~~~g~~l~s~~~D~-~v~i~~~~~~~--~~~~~~~~~~~~~-----~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~ 309 (420)
T 4gga_A 238 WAPDGRHLASGGNDN-LVNVWPSAPGE--GGWVPLQTFTQHQ-----GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 309 (420)
T ss_dssp ECTTSSEEEEEETTS-CEEEEESSCCS--SCSCCSEEECCCS-----SCEEEEEECTTCTTEEEEEECTTTCEEEEEETT
T ss_pred ecCCCCeeeeeeccc-cceEEeecccc--ccceeeeeecccC-----CceeeeeeCCCcccEEEEEeecCCCEEEEEeCC
Confidence 223666655555444 88899876422 1122212111110 112334444433 3333332 23567888888
Q ss_pred CCcEEE
Q 046902 335 TNSLRT 340 (393)
Q Consensus 335 t~~~~~ 340 (393)
+++...
T Consensus 310 t~~~~~ 315 (420)
T 4gga_A 310 SGACLS 315 (420)
T ss_dssp TTEEEE
T ss_pred ccccce
Confidence 776443
No 75
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=90.59 E-value=8.7 Score=34.01 Aligned_cols=142 Identities=13% Similarity=0.083 Sum_probs=77.7
Q ss_pred ccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeee-cCCCc
Q 046902 167 DVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQL-PLPDS 245 (393)
Q Consensus 167 ~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i-~lP~~ 245 (393)
...+.+|+..++.|+.+..+.. +......-...-+|.+...+.. ...|..+|+.+.++... .+...
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~----------h~~~v~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~ 95 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKE----------HNGQVTGVDWAPDSNRIVTCGT---DRNAYVWTLKGRTWKPTLVILRI 95 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEEC----------CSSCEEEEEEETTTTEEEEEET---TSCEEEEEEETTEEEEEEECCCC
T ss_pred CCEEEEEeCCCCcEEeeeeecC----------CCCcccEEEEeCCCCEEEEEcC---CCeEEEEECCCCeeeeeEEeecC
Confidence 4578999999887765543320 0000011111224544444332 24688899988775443 22222
Q ss_pred ccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc
Q 046902 246 VNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR 324 (393)
Q Consensus 246 ~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~ 324 (393)
. ... ..+.-. +|...++...+. .+.+|.++. ...|.....+.... .....-+.+.+++..++....
T Consensus 96 ~----~~v-~~~~~~~~~~~l~~~~~d~-~v~i~d~~~---~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 96 N----RAA-RCVRWAPNEKKFAVGSGSR-VISICYFEQ---ENDWWVCKHIKKPI----RSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp S----SCE-EEEEECTTSSEEEEEETTS-SEEEEEEET---TTTEEEEEEECTTC----CSCEEEEEECTTSSEEEEEET
T ss_pred C----Cce-eEEEECCCCCEEEEEeCCC-EEEEEEecC---CCcceeeeeeeccc----CCCeeEEEEcCCCCEEEEEcC
Confidence 1 111 123322 566655555444 899999985 23465555443321 112445677778887777776
Q ss_pred CcEEEEEECC
Q 046902 325 REKLVWFDLE 334 (393)
Q Consensus 325 ~~~l~~yd~~ 334 (393)
++.+..||+.
T Consensus 163 dg~i~~~d~~ 172 (372)
T 1k8k_C 163 DFKCRIFSAY 172 (372)
T ss_dssp TSCEEEEECC
T ss_pred CCCEEEEEcc
Confidence 7779999964
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=90.55 E-value=9.5 Score=34.38 Aligned_cols=194 Identities=7% Similarity=-0.003 Sum_probs=96.5
Q ss_pred eeeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 98 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 98 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
+.+|.++....+..+.+|+..+++....-... ......+.+.+... .++... ....+.+|+..+
T Consensus 215 ~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~-------~~~i~~~~~~~~~~--~l~~~~-------~d~~i~i~d~~~ 278 (425)
T 1r5m_A 215 VDDDKFVIPGPKGAIFVYQITEKTPTGKLIGH-------HGPISVLEFNDTNK--LLLSAS-------DDGTLRIWHGGN 278 (425)
T ss_dssp EETTEEEEECGGGCEEEEETTCSSCSEEECCC-------SSCEEEEEEETTTT--EEEEEE-------TTSCEEEECSSS
T ss_pred cCCCEEEEEcCCCeEEEEEcCCCceeeeeccC-------CCceEEEEECCCCC--EEEEEc-------CCCEEEEEECCC
Confidence 34566666666778999999887543221111 12344566776543 222222 234578888776
Q ss_pred CCeEE-ccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeE
Q 046902 178 NSWRR-ISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHV 255 (393)
Q Consensus 178 ~~W~~-~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~ 255 (393)
+.-.. +.... .....-...-+| ....+.. ...|..+|+.+.+... +...... -.
T Consensus 279 ~~~~~~~~~~~-------------~~i~~~~~~~~~-~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~-------i~ 334 (425)
T 1r5m_A 279 GNSQNCFYGHS-------------QSIVSASWVGDD-KVISCSM---DGSVRLWSLKQNTLLALSIVDGVP-------IF 334 (425)
T ss_dssp BSCSEEECCCS-------------SCEEEEEEETTT-EEEEEET---TSEEEEEETTTTEEEEEEECTTCC-------EE
T ss_pred CccceEecCCC-------------ccEEEEEECCCC-EEEEEeC---CCcEEEEECCCCcEeEecccCCcc-------EE
Confidence 53211 11000 000111112245 3333222 3589999998765433 2221111 11
Q ss_pred EEEE-eCCeEEEEEEcCCCeEEEEEEeecCC---------CCCe-----EEEEEeeCCCCCCCcceeeEEEEEeCCcEEE
Q 046902 256 DVGS-LEGCLCVFRFYNLVYVDMWMMKEHAV---------KESW-----TKLFSVQEPTPTRSFLFLRPLGYSRNGVKLL 320 (393)
Q Consensus 256 ~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~---------~~~W-----~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~ 320 (393)
.+.. -+|.+.++...+. .+.||-++.... ...| ..+..+..... .....-+.+.++|..|+
T Consensus 335 ~~~~s~~~~~l~~~~~dg-~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~ 410 (425)
T 1r5m_A 335 AGRISQDGQKYAVAFMDG-QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD---NDYIFDLSWNCAGNKIS 410 (425)
T ss_dssp EEEECTTSSEEEEEETTS-CEEEEECHHHHC--------------CEECCEEEEECCTTC---CCCEEEEEECTTSSEEE
T ss_pred EEEEcCCCCEEEEEECCC-eEEEEECCCCccceeeeecccccccCcccchhhhhhcCccc---CCceEEEEccCCCceEE
Confidence 2222 2566666555444 899998864220 0011 13333332110 00244567778888777
Q ss_pred EEEcCcEEEEEECCC
Q 046902 321 LEVRREKLVWFDLET 335 (393)
Q Consensus 321 l~~~~~~l~~yd~~t 335 (393)
....++.+..||++.
T Consensus 411 ~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 411 VAYSLQEGSVVAIPG 425 (425)
T ss_dssp EEESSSCCEEEECCC
T ss_pred EEecCceEEEEeecC
Confidence 777777799999863
No 77
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=90.03 E-value=8.8 Score=33.17 Aligned_cols=191 Identities=14% Similarity=0.064 Sum_probs=90.6
Q ss_pred ceEEEeeCCceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCC-
Q 046902 101 GLIALCNSVQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTN- 178 (393)
Q Consensus 101 GLl~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~- 178 (393)
.+|.....+..++++|+.|++... ++... . . . .....++|.. +++. . ....+..|+. ++
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~--~--~-~--~~~~~~~pdG---~ilv-s-------~~~~V~~~d~-~G~ 66 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEK--G--W-E--CNSVAATKAG---EILF-S-------YSKGAKMITR-DGR 66 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCT--T--C-C--CCEEEECTTS---CEEE-E-------CBSEEEEECT-TSC
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCc--c--C-C--CcCeEECCCC---CEEE-e-------CCCCEEEECC-CCC
Confidence 344444456789999998987443 33321 0 0 0 1122334432 2333 2 1235777777 44
Q ss_pred -CeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEE
Q 046902 179 -SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDV 257 (393)
Q Consensus 179 -~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l 257 (393)
.|+.-..-. . ......+..+|.++..... ....|+.||...+....+.+..............-
T Consensus 67 ~~W~~~~~~~------------~-~~~~~~~~~dG~~lv~~~~--~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 67 ELWNIAAPAG------------C-EMQTARILPDGNALVAWCG--HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQIN 131 (276)
T ss_dssp EEEEEECCTT------------C-EEEEEEECTTSCEEEEEES--TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCE
T ss_pred EEEEEcCCCC------------c-cccccEECCCCCEEEEecC--CCCEEEEEeCCCCEEEEEeccCCCCcccccccCce
Confidence 466432100 0 0112234467777665332 13578899986554444443322100000001011
Q ss_pred EEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCc
Q 046902 258 GSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNS 337 (393)
Q Consensus 258 ~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~ 337 (393)
...+|.+.++..... .+..|-.+ | +..|+... .. . ..-....++|+.++....+.+++.+|++|++
T Consensus 132 ~~~~G~~lv~~~~~~-~v~~~d~~--G-~~~w~~~~--~~-~-------~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 132 KNKKGNYLVPLFATS-EVREIAPN--G-QLLNSVKL--SG-T-------PFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp ECTTSCEEEEETTTT-EEEEECTT--S-CEEEEEEC--SS-C-------CCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred ECCCCCEEEEecCCC-EEEEECCC--C-CEEEEEEC--CC-C-------ccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 233677665554333 55444332 3 34465322 11 0 1113334577767666666689999999766
Q ss_pred EE
Q 046902 338 LR 339 (393)
Q Consensus 338 ~~ 339 (393)
+.
T Consensus 198 ~~ 199 (276)
T 3no2_A 198 IV 199 (276)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 78
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=89.88 E-value=11 Score=34.16 Aligned_cols=99 Identities=10% Similarity=0.029 Sum_probs=57.0
Q ss_pred CcEEEEEECCCceeee-ecCCCcccccCCceeEEEEE-eCCeEEEEE-EcCCCeEEEEEEeecCCCCCeEEEEEeeCCCC
Q 046902 224 RSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVGS-LEGCLCVFR-FYNLVYVDMWMMKEHAVKESWTKLFSVQEPTP 300 (393)
Q Consensus 224 ~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~~-~~G~L~~~~-~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~ 300 (393)
...|..+|+.+.+... +..+... ..+.- -+|...++. ...+..+.||.+.. ........+....
T Consensus 283 d~~i~i~d~~~~~~~~~~~~~~~v--------~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~----~~~~~~~~~~~h~- 349 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTVDAGSQV--------TSLIWSPHSKEIMSTHGFPDNNLSIWSYSS----SGLTKQVDIPAHD- 349 (401)
T ss_dssp TCEEEEEETTTCCEEEEEECSSCE--------EEEEECSSSSEEEEEECTTTCEEEEEEEET----TEEEEEEEEECCS-
T ss_pred CCEEEEEECCCCCEEEEEeCCCcE--------EEEEECCCCCeEEEEeecCCCcEEEEecCC----ccceeEEEecCCC-
Confidence 3578889987765433 3322111 12222 255555554 33445999999884 2355555444321
Q ss_pred CCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEE
Q 046902 301 TRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 339 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~ 339 (393)
....-+.+.++|..|+....++.+..||+.+++..
T Consensus 350 ----~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 350 ----TRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp ----SCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred ----CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 12344677788887877777778999999987644
No 79
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=89.85 E-value=9.8 Score=33.45 Aligned_cols=202 Identities=8% Similarity=0.014 Sum_probs=92.8
Q ss_pred ec-eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCC
Q 046902 100 NG-LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTN 178 (393)
Q Consensus 100 ~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~ 178 (393)
+| +|+....+..+.|||..+++...+.... .....+.+.+..+.-.++... ....+.+|+.+++
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~l~~~~-------~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQIAQHD--------APVKTIHWIKAPNYSCVMTGS-------WDKTLKFWDTRSS 161 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECS--------SCEEEEEEEECSSCEEEEEEE-------TTSEEEEECSSCS
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCceeecccc--------CceEEEEEEeCCCCCEEEEcc-------CCCcEEEEECCCC
Confidence 44 4444445678999999998876643322 123344553222222333322 2356888988776
Q ss_pred CeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCcee--eeecCCCcccccCCceeEE
Q 046902 179 SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEF--YQLPLPDSVNVSYANVHVD 256 (393)
Q Consensus 179 ~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~--~~i~lP~~~~~~~~~~~~~ 256 (393)
.-...-..+ .....+...+.....+.. ...+..+|+.+..- ..+..+... ......
T Consensus 162 ~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 219 (368)
T 3mmy_A 162 NPMMVLQLP---------------ERCYCADVIYPMAVVATA---ERGLIVYQLENQPSEFRRIESPLKH----QHRCVA 219 (368)
T ss_dssp SCSEEEECS---------------SCEEEEEEETTEEEEEEG---GGCEEEEECSSSCEEEEECCCSCSS----CEEEEE
T ss_pred cEEEEEecC---------------CCceEEEecCCeeEEEeC---CCcEEEEEeccccchhhhccccccC----CCceEE
Confidence 421110111 001111112222222222 24688888876543 333333221 111112
Q ss_pred EEEeC---CeEEEEEEcCCCeEEEEEEeecCC-CCCeEEEEEeeCCCC---CCCcceeeEEEEEeCCcEEEEEEcCcEEE
Q 046902 257 VGSLE---GCLCVFRFYNLVYVDMWMMKEHAV-KESWTKLFSVQEPTP---TRSFLFLRPLGYSRNGVKLLLEVRREKLV 329 (393)
Q Consensus 257 l~~~~---G~L~~~~~~~~~~~~iW~l~~~~~-~~~W~~~~~i~~~~~---~~~~~~~~~~~~~~~g~~i~l~~~~~~l~ 329 (393)
+.... ... ++....+..+.||.++.... .........-..... ........-+.+.++|..++....++.+.
T Consensus 220 ~~~~~~~~~~~-~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~ 298 (368)
T 3mmy_A 220 IFKDKQNKPTG-FALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFS 298 (368)
T ss_dssp EEECTTSCEEE-EEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEE
T ss_pred EcccCCCCCCe-EEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEE
Confidence 22111 112 33333344899998875321 111111110000000 00000133456677887777777777899
Q ss_pred EEECCCCcEE
Q 046902 330 WFDLETNSLR 339 (393)
Q Consensus 330 ~yd~~t~~~~ 339 (393)
.||+++++..
T Consensus 299 iwd~~~~~~~ 308 (368)
T 3mmy_A 299 FWDKDARTKL 308 (368)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCcEE
Confidence 9999987654
No 80
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=89.72 E-value=11 Score=34.04 Aligned_cols=197 Identities=8% Similarity=0.055 Sum_probs=101.5
Q ss_pred eec-eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 99 CNG-LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 99 ~~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
.+| +|+....+..+.|||..+++....-... ......+.+.|..+ .++... ....+.+|+..+
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~--~l~s~s-------~d~~i~iwd~~~ 170 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFNLQREIDQAH-------VSEITKLKFFPSGE--ALISSS-------QDMQLKIWSVKD 170 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSCEEEEETTSS-------SSCEEEEEECTTSS--EEEEEE-------TTSEEEEEETTT
T ss_pred cCCCEEEEEECCCCEEEEeCCCcceeeecccc-------cCccEEEEECCCCC--EEEEEe-------CCCeEEEEeCCC
Confidence 344 4444445678999999988766543222 22345667776533 233222 245788999876
Q ss_pred CCe-EEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeE
Q 046902 178 NSW-RRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHV 255 (393)
Q Consensus 178 ~~W-~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~ 255 (393)
+.= +.+..-. .....-...-+|.....+.. ...|..+|+.+.+... +..+.... ... .
T Consensus 171 ~~~~~~~~~h~-------------~~v~~~~~~~~~~~l~s~~~---d~~v~iwd~~~~~~~~~~~~~~~~~---~~v-~ 230 (420)
T 3vl1_A 171 GSNPRTLIGHR-------------ATVTDIAIIDRGRNVLSASL---DGTIRLWECGTGTTIHTFNRKENPH---DGV-N 230 (420)
T ss_dssp CCCCEEEECCS-------------SCEEEEEEETTTTEEEEEET---TSCEEEEETTTTEEEEEECBTTBTT---CCE-E
T ss_pred CcCceEEcCCC-------------CcEEEEEEcCCCCEEEEEcC---CCcEEEeECCCCceeEEeecCCCCC---CCc-c
Confidence 531 1111000 00000011124443333332 2468889988765433 33322111 110 1
Q ss_pred EEEE----------------------eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEE
Q 046902 256 DVGS----------------------LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYS 313 (393)
Q Consensus 256 ~l~~----------------------~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~ 313 (393)
.+.. -+|.+.++...+. .+.||-+... .....+.... .....-+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-~i~i~d~~~~------~~~~~~~~~~----~~~v~~~~~~ 299 (420)
T 3vl1_A 231 SIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG-VITVHNVFSK------EQTIQLPSKF----TCSCNSLTVD 299 (420)
T ss_dssp EEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS-CEEEEETTTC------CEEEEECCTT----SSCEEEEEEC
T ss_pred EEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC-eEEEEECCCC------ceeEEccccc----CCCceeEEEe
Confidence 1111 2566666655544 8999987631 1223332211 1124456777
Q ss_pred eCCc-EEEEEEcCcEEEEEECCCCc--EEEEE
Q 046902 314 RNGV-KLLLEVRREKLVWFDLETNS--LRTVK 342 (393)
Q Consensus 314 ~~g~-~i~l~~~~~~l~~yd~~t~~--~~~v~ 342 (393)
++|. .++....++.+..||+++.+ +..+.
T Consensus 300 ~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~ 331 (420)
T 3vl1_A 300 GNNANYIYAGYENGMLAQWDLRSPECPVGEFL 331 (420)
T ss_dssp SSCTTEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEEcCCCcCchhhhh
Confidence 7777 77777777789999999864 44443
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=89.54 E-value=13 Score=34.37 Aligned_cols=199 Identities=13% Similarity=0.092 Sum_probs=95.3
Q ss_pred EeeeeeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEE
Q 046902 95 VLGSCNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYS 174 (393)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vys 174 (393)
.+...+++|+....+..+.|||..+++...--.. +......+.+.+.. .++... ....+.+++
T Consensus 127 ~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~-------h~~~V~~l~~~~~~---~l~s~s-------~dg~i~vwd 189 (464)
T 3v7d_B 127 CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSG-------HDGGVWALKYAHGG---ILVSGS-------TDRTVRVWD 189 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCEEEEEECSTT---EEEEEE-------TTSCEEEEE
T ss_pred EEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeC-------CCcCEEEEEEcCCC---EEEEEe-------CCCCEEEEE
Confidence 3444556666666677899999988874432111 11233445555433 344333 234688899
Q ss_pred eCCCCeEEccccCcccccccccccccccccCceeEe----CceEEEeccCCCCCcEEEEEECCCceeeeec---------
Q 046902 175 LKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA----GGALHWVSPKSSTRSVIVAFDLVAEEFYQLP--------- 241 (393)
Q Consensus 175 s~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~----~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~--------- 241 (393)
.+++.-... +. .+. ..-.++.+ +|.....+.. ...|..+|+.+..-....
T Consensus 190 ~~~~~~~~~--~~----------~h~--~~v~~l~~~~~~~~~~l~s~s~---d~~i~vwd~~~~~~~~~~~~~~~~~~~ 252 (464)
T 3v7d_B 190 IKKGCCTHV--FE----------GHN--STVRCLDIVEYKNIKYIVTGSR---DNTLHVWKLPKESSVPDHGEEHDYPLV 252 (464)
T ss_dssp TTTTEEEEE--EC----------CCS--SCEEEEEEEESSSCEEEEEEET---TSCEEEEECCCCCCC------CCSSEE
T ss_pred CCCCcEEEE--EC----------CCC--CccEEEEEecCCCCCEEEEEcC---CCcEEEeeCCCCcccccccccCCcceE
Confidence 887742211 11 000 00011111 2333333222 246788888765422110
Q ss_pred --CCCcc----cc-cCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEe
Q 046902 242 --LPDSV----NV-SYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSR 314 (393)
Q Consensus 242 --lP~~~----~~-~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~ 314 (393)
.|... .. ........-...+|.+.++...+. .+.+|-+.. -..+..+.... .....+.+.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~-~i~vwd~~~------~~~~~~~~~~~-----~~v~~~~~~~ 320 (464)
T 3v7d_B 253 FHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN-TLIVWDVAQ------MKCLYILSGHT-----DRIYSTIYDH 320 (464)
T ss_dssp ESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTS-CEEEEETTT------TEEEEEECCCS-----SCEEEEEEET
T ss_pred eeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCC-eEEEEECCC------CcEEEEecCCC-----CCEEEEEEcC
Confidence 00000 00 000001112234555555555444 889997653 12333333211 1234566677
Q ss_pred CCcEEEEEEcCcEEEEEECCCCcEE
Q 046902 315 NGVKLLLEVRREKLVWFDLETNSLR 339 (393)
Q Consensus 315 ~g~~i~l~~~~~~l~~yd~~t~~~~ 339 (393)
+|..++....++.+..||+++++..
T Consensus 321 ~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 321 ERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEE
Confidence 7777777766667888888877643
No 82
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=89.53 E-value=11 Score=33.53 Aligned_cols=77 Identities=10% Similarity=0.050 Sum_probs=44.8
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCC--C-eEEE---EEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-cCcEEEEEEC
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKE--S-WTKL---FSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFDL 333 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~--~-W~~~---~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~yd~ 333 (393)
+|+..++.......+.+|.++...... . .... ..+..... ....-+++.++|..+++.. .+..+..||+
T Consensus 165 dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 240 (361)
T 3scy_A 165 DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPG----SGPRHLIFNSDGKFAYLINEIGGTVIAFRY 240 (361)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTT----CCEEEEEECTTSSEEEEEETTTCEEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCC----CCCeEEEEcCCCCEEEEEcCCCCeEEEEEe
Confidence 776444444444489999988532100 1 2222 22222111 1234567788988888776 3567999999
Q ss_pred CCCcEEEE
Q 046902 334 ETNSLRTV 341 (393)
Q Consensus 334 ~t~~~~~v 341 (393)
++++++.+
T Consensus 241 ~~g~~~~~ 248 (361)
T 3scy_A 241 ADGMLDEI 248 (361)
T ss_dssp ETTEEEEE
T ss_pred cCCceEEe
Confidence 98887666
No 83
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=89.19 E-value=11 Score=32.92 Aligned_cols=119 Identities=13% Similarity=0.067 Sum_probs=66.2
Q ss_pred Cce-EEEeccCCCCCcEEEEEECC--Cceee---ee-cCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEee
Q 046902 211 GGA-LHWVSPKSSTRSVIVAFDLV--AEEFY---QL-PLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKE 282 (393)
Q Consensus 211 ~G~-lyw~~~~~~~~~~il~fD~~--~e~~~---~i-~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~ 282 (393)
+|. +|..... ...|..+|+. +.++. .+ .+|.... .......+... +|+..++.......+.+|.++.
T Consensus 188 dg~~l~~~~~~---~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 188 NEQYAYCVNEL---NSSVDVWELKDPHGNIECVQTLDMMPENFS--DTRWAADIHITPDGRHLYACDRTASLITVFSVSE 262 (343)
T ss_dssp TSSEEEEEETT---TTEEEEEESSCTTSCCEEEEEEECSCTTCC--SCCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCEEEEEeCC---CCEEEEEEecCCCCcEEEEeeccccCcccc--ccCCccceEECCCCCEEEEEecCCCEEEEEEEcC
Confidence 455 4444322 3578889984 34432 22 2443321 11111123332 5644444444445899999874
Q ss_pred cCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEE--ECCCCcEEEEE
Q 046902 283 HAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWF--DLETNSLRTVK 342 (393)
Q Consensus 283 ~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~y--d~~t~~~~~v~ 342 (393)
. ...+..+..+.... ...-+++.++|..+++... +..+..| |+++++++.+.
T Consensus 263 ~--~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 263 D--GSVLSKEGFQPTET------QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp T--SCCEEEEEEEECSS------SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred C--CCceEEeeeecCCC------ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 2 24567776666432 1334677888888888763 3556666 88888888773
No 84
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=89.16 E-value=11 Score=33.25 Aligned_cols=189 Identities=14% Similarity=0.129 Sum_probs=95.8
Q ss_pred ec-eEEEeeCCceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 100 NG-LIALCNSVQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 100 ~G-Ll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
+| +|+....+..+.|||..+++... ++... .....+.+.|.. .+ ++... ....+.+|+..+
T Consensus 66 d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~--------~~v~~~~~s~~~-~~-l~s~~-------~d~~v~iw~~~~ 128 (340)
T 1got_B 66 DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRS--------SWVMTCAYAPSG-NY-VACGG-------LDNICSIYNLKT 128 (340)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECSS--------SCEEEEEECTTS-SE-EEEEE-------TTCEEEEEETTT
T ss_pred CCCEEEEEeCCCcEEEEECCCCCcceEeecCC--------ccEEEEEECCCC-CE-EEEEe-------CCCeEEEEECcc
Confidence 44 33334456789999998876443 33221 223455666643 22 22222 235688888876
Q ss_pred CC--eEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCcee
Q 046902 178 NS--WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVH 254 (393)
Q Consensus 178 ~~--W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~ 254 (393)
+. .+....+. .+......-...-+|.+.- +. ....|..+|+.+.+... +.... .. -
T Consensus 129 ~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~l~s-~s---~d~~i~~wd~~~~~~~~~~~~h~------~~-v 187 (340)
T 1got_B 129 REGNVRVSRELA----------GHTGYLSCCRFLDDNQIVT-SS---GDTTCALWDIETGQQTTTFTGHT------GD-V 187 (340)
T ss_dssp CSBSCEEEEEEE----------CCSSCEEEEEEEETTEEEE-EE---TTSCEEEEETTTTEEEEEECCCS------SC-E
T ss_pred CCCcceeEEEec----------CCCccEEEEEECCCCcEEE-EE---CCCcEEEEECCCCcEEEEEcCCC------Cc-e
Confidence 42 22111111 0000000001112344322 11 13568899998766433 22111 11 1
Q ss_pred EEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEEC
Q 046902 255 VDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDL 333 (393)
Q Consensus 255 ~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~ 333 (393)
..+... +|.+.+.+..+. .+.||-+... ....++.... ....-+++.++|..++....++.+..||+
T Consensus 188 ~~~~~~~~~~~l~sg~~d~-~v~~wd~~~~------~~~~~~~~h~-----~~v~~v~~~p~~~~l~s~s~d~~v~iwd~ 255 (340)
T 1got_B 188 MSLSLAPDTRLFVSGACDA-SAKLWDVREG------MCRQTFTGHE-----SDINAICFFPNGNAFATGSDDATCRLFDL 255 (340)
T ss_dssp EEEEECTTSSEEEEEETTS-CEEEEETTTC------SEEEEECCCS-----SCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEECCCCCEEEEEeCCC-cEEEEECCCC------eeEEEEcCCc-----CCEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 123332 667666665544 8999977531 1223333211 12445677788887777777778999999
Q ss_pred CCCcE
Q 046902 334 ETNSL 338 (393)
Q Consensus 334 ~t~~~ 338 (393)
.+++.
T Consensus 256 ~~~~~ 260 (340)
T 1got_B 256 RADQE 260 (340)
T ss_dssp TTTEE
T ss_pred CCCcE
Confidence 98763
No 85
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=88.97 E-value=19 Score=35.63 Aligned_cols=193 Identities=12% Similarity=0.025 Sum_probs=101.2
Q ss_pred eEEEEeccccce--eccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCc
Q 046902 111 ELALFNPSTRKL--KTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPR 188 (393)
Q Consensus 111 ~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~ 188 (393)
.+++++.-|++- +.+-..+ .......+..+.+.. .|-++.... .. ....+.+++..++.|+.+..-.
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~-----~~~~~~~~~~~SpDG-~~l~~~~~~--~~--~~~~l~~~~~~~~~~~~l~~~~- 271 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERT-----GDPTTFLQSDLSRDG-KYLFVYILR--GW--SENDVYWKRPGEKDFRLLVKGV- 271 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCC-----CCTTCEEEEEECTTS-CCEEEEEEE--TT--TEEEEEEECTTCSSCEEEEECS-
T ss_pred EEEEEECCCCchhceEEEecC-----CCCEEEEEEEECCCC-CEEEEEEeC--CC--CceEEEEEcCCCCceEEeecCC-
Confidence 489999888763 2222211 011223455566544 444443321 10 2334555555567787764321
Q ss_pred ccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCce---eeeecCCCcccccCCceeEEEEEeCCeEE
Q 046902 189 FLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEE---FYQLPLPDSVNVSYANVHVDVGSLEGCLC 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~---~~~i~lP~~~~~~~~~~~~~l~~~~G~L~ 265 (393)
. .....+..+|.+|+.+........|..+|+.+.. |..+-.+... .. -..+...+|.|.
T Consensus 272 ---------~----~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~----~~-l~~~~~~~~~lv 333 (695)
T 2bkl_A 272 ---------G----AKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS----AS-LLSVSIVGGHLS 333 (695)
T ss_dssp ---------S----CCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS----CE-EEEEEEETTEEE
T ss_pred ---------C----ceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC----Ce-EEEEEEECCEEE
Confidence 0 1112344566666665433335789999997654 6665332211 11 113344488887
Q ss_pred EEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC----cEEEEEECCCCcEEEE
Q 046902 266 VFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR----EKLVWFDLETNSLRTV 341 (393)
Q Consensus 266 ~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~----~~l~~yd~~t~~~~~v 341 (393)
+....+. ...||+++-.+ . ....+..... .....+++.++++.+++...+ ..++.||+++++.+.+
T Consensus 334 ~~~~~dg-~~~l~~~~~~g--~---~~~~l~~~~~----~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l 403 (695)
T 2bkl_A 334 LEYLKDA-TSEVRVATLKG--K---PVRTVQLPGV----GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELW 403 (695)
T ss_dssp EEEEETT-EEEEEEEETTC--C---EEEECCCSSS----SEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred EEEEECC-EEEEEEEeCCC--C---eeEEecCCCC----eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 7766544 78899887422 1 2334443210 011223344567777766432 3699999999887666
Q ss_pred E
Q 046902 342 K 342 (393)
Q Consensus 342 ~ 342 (393)
.
T Consensus 404 ~ 404 (695)
T 2bkl_A 404 A 404 (695)
T ss_dssp E
T ss_pred e
Confidence 3
No 86
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=88.87 E-value=11 Score=32.77 Aligned_cols=109 Identities=9% Similarity=0.043 Sum_probs=59.3
Q ss_pred cEEEEEECCC-ceeee-----ecCCCcccccCCceeEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeC
Q 046902 225 SVIVAFDLVA-EEFYQ-----LPLPDSVNVSYANVHVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQE 297 (393)
Q Consensus 225 ~~il~fD~~~-e~~~~-----i~lP~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~ 297 (393)
..|..||+.+ .+... +..+.... ...+.. -+|+..++.......+.+|.++.. ...+.....+..
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~--~g~~~~~~~~~~ 222 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAG------PRHMVFHPNEQYAYCVNELNSSVDVWELKDP--HGNIECVQTLDM 222 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCC------EEEEEECTTSSEEEEEETTTTEEEEEESSCT--TSCCEEEEEEEC
T ss_pred CEEEEEEecCCCceeeecccccccCCCCC------cceEEECCCCCEEEEEeCCCCEEEEEEecCC--CCcEEEEeeccc
Confidence 5799999987 55542 23332211 112222 266633333333448999998642 234554444442
Q ss_pred C-CCCCCcceeeEEEEEeCCcEEEEEE-cCcEEEEEECC--CCcEEEE
Q 046902 298 P-TPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFDLE--TNSLRTV 341 (393)
Q Consensus 298 ~-~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~yd~~--t~~~~~v 341 (393)
. ..........-+.+.++|..+++.. .+..+..||++ +++.+.+
T Consensus 223 ~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 223 MPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp SCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred cCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 1 1111111223467778888787665 34579999998 6666665
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=88.83 E-value=17 Score=34.80 Aligned_cols=71 Identities=13% Similarity=-0.004 Sum_probs=42.6
Q ss_pred CCe-EEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeC-CcEEEEEEcCcEEEEEECCCCcE
Q 046902 261 EGC-LCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRN-GVKLLLEVRREKLVWFDLETNSL 338 (393)
Q Consensus 261 ~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~-g~~i~l~~~~~~l~~yd~~t~~~ 338 (393)
+|. +.+.... +..+.+|-++. ...+..+..... ......-+.+.++ |+.++....++.+..||+++++.
T Consensus 171 ~~~~~l~~~~~-d~~v~vwd~~~------~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 241 (615)
T 1pgu_A 171 SRPMRSMTVGD-DGSVVFYQGPP------FKFSASDRTHHK--QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF 241 (615)
T ss_dssp SSSCEEEEEET-TTEEEEEETTT------BEEEEEECSSSC--TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE
T ss_pred CCCcEEEEEeC-CCcEEEEeCCC------cceeeeecccCC--CCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCE
Confidence 454 4444444 34899997542 345555543210 0002345677788 88777777777799999998775
Q ss_pred EE
Q 046902 339 RT 340 (393)
Q Consensus 339 ~~ 340 (393)
..
T Consensus 242 ~~ 243 (615)
T 1pgu_A 242 LK 243 (615)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 88
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=88.75 E-value=12 Score=32.83 Aligned_cols=208 Identities=8% Similarity=0.012 Sum_probs=102.1
Q ss_pred eeeceEEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeC
Q 046902 98 SCNGLIALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLK 176 (393)
Q Consensus 98 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~ 176 (393)
+.+|-|.+.+ ....++++||.+++...+.... .....++.+++... ++.... . .......+.+|+..
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~~~~~i~~~~dg~---l~v~~~-~-~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSH-------KANPAAIKIHKDGR---LFVCYL-G-DFKSTGGIFAATEN 120 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECS-------SSSEEEEEECTTSC---EEEEEC-T-TSSSCCEEEEECTT
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCC-------CCCcceEEECCCCc---EEEEeC-C-CCCCCceEEEEeCC
Confidence 3456665543 3567999999998877653211 11245667776542 322221 0 00012467788887
Q ss_pred CCCeEEc-cccCcccccccccccccccccCceeEeCceEEEeccCC---CCCcEEEEEECCCceeeeecCCCcccccCCc
Q 046902 177 TNSWRRI-SNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS---STRSVIVAFDLVAEEFYQLPLPDSVNVSYAN 252 (393)
Q Consensus 177 t~~W~~~-~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~---~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~ 252 (393)
++.-+.+ ..... ......-.+.-+|.+|...... .....|..+|..+.++..+.- ... .
T Consensus 121 ~~~~~~~~~~~~~-----------~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~---~- 183 (333)
T 2dg1_A 121 GDNLQDIIEDLST-----------AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NIS---V- 183 (333)
T ss_dssp SCSCEEEECSSSS-----------CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EES---S-
T ss_pred CCEEEEEEccCcc-----------CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCC---c-
Confidence 7765422 11110 0000111122357776544320 113579999988766655421 110 1
Q ss_pred eeEEEEE-eCCe-EEEEEEcCCCeEEEEEEeecCCCCCeEEEE-Ee--eCCCCCCCcceeeEEEEEeCCcEEEEEE-cCc
Q 046902 253 VHVDVGS-LEGC-LCVFRFYNLVYVDMWMMKEHAVKESWTKLF-SV--QEPTPTRSFLFLRPLGYSRNGVKLLLEV-RRE 326 (393)
Q Consensus 253 ~~~~l~~-~~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~-~i--~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~ 326 (393)
...++. -+|+ |++..... ..+.+|.++..+ ....... .+ .... .....-+++.++|. |++.. .+.
T Consensus 184 -~~~i~~~~dg~~l~v~~~~~-~~i~~~d~~~~g--~~~~~~~~~~~~~~~~----~~~~~~i~~d~~G~-l~v~~~~~~ 254 (333)
T 2dg1_A 184 -ANGIALSTDEKVLWVTETTA-NRLHRIALEDDG--VTIQPFGATIPYYFTG----HEGPDSCCIDSDDN-LYVAMYGQG 254 (333)
T ss_dssp -EEEEEECTTSSEEEEEEGGG-TEEEEEEECTTS--SSEEEEEEEEEEECCS----SSEEEEEEEBTTCC-EEEEEETTT
T ss_pred -ccceEECCCCCEEEEEeCCC-CeEEEEEecCCC--cCcccccceEEEecCC----CCCCCceEECCCCC-EEEEEcCCC
Confidence 112333 2565 66655433 367777665322 2222111 11 1111 01233456666776 55554 345
Q ss_pred EEEEEECCCCcEEEEEE
Q 046902 327 KLVWFDLETNSLRTVKI 343 (393)
Q Consensus 327 ~l~~yd~~t~~~~~v~~ 343 (393)
.+..||++++.++.+..
T Consensus 255 ~v~~~d~~g~~~~~~~~ 271 (333)
T 2dg1_A 255 RVLVFNKRGYPIGQILI 271 (333)
T ss_dssp EEEEECTTSCEEEEEEC
T ss_pred EEEEECCCCCEEEEEEc
Confidence 79999998777777754
No 89
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=88.26 E-value=13 Score=32.66 Aligned_cols=148 Identities=12% Similarity=-0.005 Sum_probs=78.1
Q ss_pred ccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEeCce-EEEeccCCCCCcEEEEEECCCcee-eeecCCC
Q 046902 167 DVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGA-LHWVSPKSSTRSVIVAFDLVAEEF-YQLPLPD 244 (393)
Q Consensus 167 ~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~il~fD~~~e~~-~~i~lP~ 244 (393)
...+.+++..++.-...-... . ....-.+.-+|. +|..... ...|..+|+.+.+. ..++.+.
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~------------~-~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~~~~~~~~~~~ 131 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHND------------L-KPFGATINNTTQTLWFGNTV---NSAVTAIDAKTGEVKGRLVLDD 131 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEES------------S-CCCSEEEETTTTEEEEEETT---TTEEEEEETTTCCEEEEEESCC
T ss_pred CccEEEEcCCCCeEEEEEecC------------C-CcceEEECCCCCEEEEEecC---CCEEEEEeCCCCeeEEEEecCC
Confidence 346788888776533221111 0 011223344666 5554332 35899999987765 4455543
Q ss_pred ccccc-CCcee-EEEEEe-CCe-EEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEE
Q 046902 245 SVNVS-YANVH-VDVGSL-EGC-LCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLL 320 (393)
Q Consensus 245 ~~~~~-~~~~~-~~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~ 320 (393)
..... ..... ..+... +|+ |++........+.+|-++ ....+..+..... ....+.+.++|+.++
T Consensus 132 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~------~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~ 200 (353)
T 3vgz_A 132 RKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGG------NIKLKTAIQNTGK-----MSTGLALDSEGKRLY 200 (353)
T ss_dssp CCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT------TTEEEEEECCCCT-----TCCCCEEETTTTEEE
T ss_pred CccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC------CCceEEEecCCCC-----ccceEEECCCCCEEE
Confidence 22100 00111 123332 554 555554333356665433 2345555552111 123467788888888
Q ss_pred EEEcCcEEEEEECCCCcEEEE
Q 046902 321 LEVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 321 l~~~~~~l~~yd~~t~~~~~v 341 (393)
+...+..+..||+++++....
T Consensus 201 ~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 201 TTNADGELITIDTADNKILSR 221 (353)
T ss_dssp EECTTSEEEEEETTTTEEEEE
T ss_pred EEcCCCeEEEEECCCCeEEEE
Confidence 887777899999999876543
No 90
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=88.22 E-value=13 Score=32.68 Aligned_cols=70 Identities=9% Similarity=0.079 Sum_probs=44.1
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEE
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 340 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~ 340 (393)
+|.+.++...+. .+.+|-+... ...+..+.... ....-+.+.++|..++....++.+..||+++.+...
T Consensus 186 ~~~~l~~~~~dg-~i~i~d~~~~-----~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 186 KGKYIIAGHKDG-KISKYDVSNN-----YEYVDSIDLHE-----KSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp GGCEEEEEETTS-EEEEEETTTT-----TEEEEEEECCS-----SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEcCCC-EEEEEECCCC-----cEeEEEEecCC-----CceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 566555554443 8999977631 23444444321 123456777788888877777789999999877554
Q ss_pred E
Q 046902 341 V 341 (393)
Q Consensus 341 v 341 (393)
.
T Consensus 255 ~ 255 (369)
T 3zwl_B 255 K 255 (369)
T ss_dssp E
T ss_pred e
Confidence 3
No 91
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=88.11 E-value=11 Score=34.53 Aligned_cols=115 Identities=13% Similarity=0.047 Sum_probs=68.0
Q ss_pred eCceEEEeccCCCCCcEEEEEECCCceeeee---cC-C-----CcccccCCceeEEEEEeCCeEEEEEEcC------CCe
Q 046902 210 AGGALHWVSPKSSTRSVIVAFDLVAEEFYQL---PL-P-----DSVNVSYANVHVDVGSLEGCLCVFRFYN------LVY 274 (393)
Q Consensus 210 ~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i---~l-P-----~~~~~~~~~~~~~l~~~~G~L~~~~~~~------~~~ 274 (393)
.+|.++|.+.. ..+.++|+.++.-..+ .+ . ..... .......+-.-+++||+..... ...
T Consensus 236 ~dG~~~~vs~~----g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p-~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 236 KAGRLVWPTYT----GKIHQIDLSSGDAKFLPAVEALTEAERADGWRP-GGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp TTTEEEEEBTT----SEEEEEECTTSSCEECCCEESSCHHHHHTTEEE-CSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred CCCcEEEEeCC----CEEEEEECCCCcceeecceeccccccccccccC-CCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 47889998764 5799999987653222 10 0 01000 0000122222367778775421 225
Q ss_pred EEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCc-EEEEEEc-CcEEEEEECCCCcEE
Q 046902 275 VDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGV-KLLLEVR-REKLVWFDLETNSLR 339 (393)
Q Consensus 275 ~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~-~i~l~~~-~~~l~~yd~~t~~~~ 339 (393)
-.||+++- ..+..+.+|.+.. ...-+++.++|. .+|.... ++.+..||..|++..
T Consensus 311 ~~V~viD~----~t~kv~~~i~vg~------~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 311 RFVVVLDA----KTGERLAKFEMGH------EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp EEEEEEET----TTCCEEEEEEEEE------EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CEEEEEEC----CCCeEEEEEECCC------CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 68999984 4567777777632 234578888875 5665443 467999999998743
No 92
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=87.78 E-value=13 Score=32.39 Aligned_cols=72 Identities=8% Similarity=0.088 Sum_probs=41.7
Q ss_pred eEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECC-CCcEEEE
Q 046902 263 CLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLE-TNSLRTV 341 (393)
Q Consensus 263 ~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~-t~~~~~v 341 (393)
.+.+.+..+ ..+.||.++... ...|.....-... ....-+++.++|..|.....++.+..||.. .++|..+
T Consensus 229 ~~las~s~D-~~v~iw~~~~~~-~~~~~~~~~~~~~------~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~ 300 (316)
T 3bg1_A 229 STIASCSQD-GRVFIWTCDDAS-SNTWSPKLLHKFN------DVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI 300 (316)
T ss_dssp CEEEEEETT-CEEEEEECSSTT-CCCCBCCEEEECS------SCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEE
T ss_pred ceEEEEcCC-CeEEEEEccCcc-ccchhhhhhhcCC------CcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEe
Confidence 444444444 499999987522 1234321101111 124456777888877777767778889876 4567766
Q ss_pred E
Q 046902 342 K 342 (393)
Q Consensus 342 ~ 342 (393)
.
T Consensus 301 ~ 301 (316)
T 3bg1_A 301 S 301 (316)
T ss_dssp E
T ss_pred e
Confidence 4
No 93
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=87.71 E-value=16 Score=33.27 Aligned_cols=193 Identities=10% Similarity=0.035 Sum_probs=99.1
Q ss_pred eceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC
Q 046902 100 NGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS 179 (393)
Q Consensus 100 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~ 179 (393)
.+.|++.. ...+...++.+++...+.... ....++.+|+..+ +|+.... ....+..++..++.
T Consensus 87 ~~~l~~~~-~~~I~~i~~~~~~~~~~~~~~--------~~~~gl~~d~~~~--~ly~~D~------~~~~I~r~~~~g~~ 149 (386)
T 3v65_B 87 EPVLLFAN-RIDIRQVLPHRSEYTLLLNNL--------ENAIALDFHHRRE--LVFWSDV------TLDRILRANLNGSN 149 (386)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCCEEEECSC--------SCEEEEEEETTTT--EEEEEET------TTTEEEEEETTSCC
T ss_pred cceeEeec-CccceeeccCCCcEEEEecCC--------CccEEEEEecCCC--eEEEEeC------CCCcEEEEecCCCC
Confidence 45555553 345777777666554433221 2356788887655 3333221 23467777777665
Q ss_pred eEEccccCcccccccccccccccccCceeE-eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEE
Q 046902 180 WRRISNLPRFLRDFYDYLYHSLFRKGYGVL-AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVG 258 (393)
Q Consensus 180 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~-~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~ 258 (393)
.+.+.... ......-.+- .+|.|||.-.. ...|.++|+....-..+. ..... . ...++
T Consensus 150 ~~~~~~~~------------~~~p~glavd~~~g~lY~~d~~---~~~I~~~~~dg~~~~~l~-~~~l~---~--P~gia 208 (386)
T 3v65_B 150 VEEVVSTG------------LESPGGLAVDWVHDKLYWTDSG---TSRIEVANLDGAHRKVLL-WQSLE---K--PRAIA 208 (386)
T ss_dssp EEEEECSS------------CSCCCCEEEETTTTEEEEEETT---TTEEEECBTTSCSCEEEE-CSSCS---C--EEEEE
T ss_pred cEEEEeCC------------CCCccEEEEEeCCCeEEEEcCC---CCeEEEEeCCCCceEEee-cCCCC---C--CcEEE
Confidence 55442111 1001111232 46899998543 458999998765433322 11111 1 12444
Q ss_pred Ee--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEEECCC
Q 046902 259 SL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLET 335 (393)
Q Consensus 259 ~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd~~t 335 (393)
+. +|.||+..... .-.|++.+-.+. .. . .+.... .....-+++.++++.||+... ...+..+|+++
T Consensus 209 vdp~~g~ly~td~~~--~~~I~r~~~dG~-~~--~--~~~~~~----~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 209 LHPMEGTIYWTDWGN--TPRIEASSMDGS-GR--R--IIADTH----LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EETTTTEEEEEECSS--SCEEEEEETTSC-SC--E--EEECSS----CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred EEcCCCeEEEeccCC--CCEEEEEeCCCC-Cc--E--EEEECC----CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 43 78888876433 245666664332 11 1 111111 112334556655667777653 34688888887
Q ss_pred CcEEEE
Q 046902 336 NSLRTV 341 (393)
Q Consensus 336 ~~~~~v 341 (393)
...+.+
T Consensus 278 ~~~~~~ 283 (386)
T 3v65_B 278 SHRKAV 283 (386)
T ss_dssp CSCEEE
T ss_pred CeeEEE
Confidence 655444
No 94
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=87.69 E-value=12 Score=31.60 Aligned_cols=185 Identities=15% Similarity=0.090 Sum_probs=97.5
Q ss_pred CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC-CCeEEccccC
Q 046902 109 VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT-NSWRRISNLP 187 (393)
Q Consensus 109 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t-~~W~~~~~~p 187 (393)
...++++|+.+++...+.... ....++.+.|..+ +-++ .. ...+.+++..+ +....+....
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~--------~~v~~~~~spdg~-~l~~--~~-------~~~i~~~d~~~~~~~~~~~~~~ 82 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP--------ELFEAPNWSPDGK-YLLL--NS-------EGLLYRLSLAGDPSPEKVDTGF 82 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES--------SCCEEEEECTTSS-EEEE--EE-------TTEEEEEESSSCCSCEECCCTT
T ss_pred ceeEEEEeCCCCceeeeccCC--------cceEeeEECCCCC-EEEE--Ec-------CCeEEEEeCCCCCCceEecccc
Confidence 457999999999877665433 1123455666543 2222 21 23788999988 7766553221
Q ss_pred cccccccccccccccccCceeEeCceEEEecc-CCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-CCeEE
Q 046902 188 RFLRDFYDYLYHSLFRKGYGVLAGGALHWVSP-KSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-EGCLC 265 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~-~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-~G~L~ 265 (393)
. ..........-+|....... .......|..+|+.+.....+...... ..+.-. +|+..
T Consensus 83 ~-----------~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~spdg~~l 143 (297)
T 2ojh_A 83 A-----------TICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPS--------YWHGWSPDGKSF 143 (297)
T ss_dssp C-----------CCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSE--------EEEEECTTSSEE
T ss_pred c-----------cccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCc--------cceEECCCCCEE
Confidence 0 00011112223454333333 222346788889887665544332211 122222 56644
Q ss_pred E-EEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-C--cEEEEEECCCCcEEEE
Q 046902 266 V-FRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-R--EKLVWFDLETNSLRTV 341 (393)
Q Consensus 266 ~-~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~--~~l~~yd~~t~~~~~v 341 (393)
+ ..... ..+.||.++..+ .... .+.... ....-+.+.++|..|++... + ..++.+++.+++.+.+
T Consensus 144 ~~~~~~~-~~~~l~~~~~~~--~~~~---~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 144 TYCGIRD-QVFDIYSMDIDS--GVET---RLTHGE-----GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp EEEEEET-TEEEEEEEETTT--CCEE---ECCCSS-----SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred EEEECCC-CceEEEEEECCC--Ccce---EcccCC-----CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 4 44333 478999987532 2221 121110 12344566778887776653 2 3588888888777655
No 95
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=87.28 E-value=16 Score=32.68 Aligned_cols=203 Identities=10% Similarity=0.028 Sum_probs=95.1
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCC------CCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEe
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPC------LVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSL 175 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~------~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss 175 (393)
+|+....+..+.|||..+++......... ............+.+.+..+.+-+. .. ....+.+|+.
T Consensus 58 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s-~~-------~d~~i~iwd~ 129 (408)
T 4a11_B 58 YMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS-SS-------FDKTLKVWDT 129 (408)
T ss_dssp EEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE-EE-------TTSEEEEEET
T ss_pred EEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE-Ee-------CCCeEEEeeC
Confidence 33333446678888888765443221100 0000122334566676644433222 22 2356888988
Q ss_pred CCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCcee
Q 046902 176 KTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVH 254 (393)
Q Consensus 176 ~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~ 254 (393)
.++.-...-..+... .... -.+..-++.+...+.. ...|..+|+.+..... +.... .. -
T Consensus 130 ~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~~~---~~~v~~~d~~~~~~~~~~~~~~------~~-v 189 (408)
T 4a11_B 130 NTLQTADVFNFEETV-------YSHH---MSPVSTKHCLVAVGTR---GPKVQLCDLKSGSCSHILQGHR------QE-I 189 (408)
T ss_dssp TTTEEEEEEECSSCE-------EEEE---ECSSCSSCCEEEEEES---SSSEEEEESSSSCCCEEECCCC------SC-E
T ss_pred CCCccceeccCCCce-------eeeE---eecCCCCCcEEEEEcC---CCeEEEEeCCCcceeeeecCCC------Cc-E
Confidence 876543322111000 0000 0000112333333332 3468889987654322 22111 11 1
Q ss_pred EEEEEe-CCe-EEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCC---------C-CCCCcceeeEEEEEeCCcEEEEE
Q 046902 255 VDVGSL-EGC-LCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEP---------T-PTRSFLFLRPLGYSRNGVKLLLE 322 (393)
Q Consensus 255 ~~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~---------~-~~~~~~~~~~~~~~~~g~~i~l~ 322 (393)
..+... +|. +.+.+..+. .+.+|-+.... ... ..+... . .........-+.+.++|..++..
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg-~i~i~d~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 263 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADS-RVKLWDVRRAS--GCL---ITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV 263 (408)
T ss_dssp EEEEECSSCTTEEEEEETTS-CEEEEETTCSS--CCS---EECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEECCCCCcEEEEEcCCC-cEEEEECCCCC--ccc---ccccccccccceeeccccccccCceeEEEEcCCCCEEEEe
Confidence 123322 444 555555444 89999886422 111 111100 0 00111124456777788878877
Q ss_pred EcCcEEEEEECCCCcE
Q 046902 323 VRREKLVWFDLETNSL 338 (393)
Q Consensus 323 ~~~~~l~~yd~~t~~~ 338 (393)
..++.+..||+.+++.
T Consensus 264 ~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 264 GTDNRMRLWNSSNGEN 279 (408)
T ss_dssp ETTSCEEEEETTTCCB
T ss_pred cCCCeEEEEECCCCcc
Confidence 7777899999998653
No 96
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=87.08 E-value=14 Score=32.03 Aligned_cols=190 Identities=9% Similarity=0.018 Sum_probs=93.2
Q ss_pred eEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC-eEEcc--ccC
Q 046902 111 ELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS-WRRIS--NLP 187 (393)
Q Consensus 111 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~-W~~~~--~~p 187 (393)
.+.++++.+++....-+.. ....++.++|..+ + ++..... ....+.+|+...+. -.... ..+
T Consensus 109 ~i~v~d~~~~~~~~~~~~~--------~~~~~~~~spdg~-~-l~~~~~~-----~~~~i~~~~~~~~g~~~~~~~~~~~ 173 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIP--------YDAVGIAISPNGN-G-LILIDRS-----SANTVRRFKIDADGVLFDTGQEFIS 173 (331)
T ss_dssp EEEEEETTTTEEEEEEECC--------TTEEEEEECTTSS-C-EEEEEET-----TTTEEEEEEECTTCCEEEEEEEEEC
T ss_pred cEEEEECCCCCeEEEEECC--------CCccceEECCCCC-E-EEEEecC-----CCceEEEEEECCCCcEeecCCcccc
Confidence 7999999998765432211 1124677777654 3 3222210 12237778776432 11110 001
Q ss_pred cccccccccccccccccCceeEeCce-EEEeccCCCCCcEEEEEECCCcee----eeecCCCcccccCCceeEEEEE-eC
Q 046902 188 RFLRDFYDYLYHSLFRKGYGVLAGGA-LHWVSPKSSTRSVIVAFDLVAEEF----YQLPLPDSVNVSYANVHVDVGS-LE 261 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~il~fD~~~e~~----~~i~lP~~~~~~~~~~~~~l~~-~~ 261 (393)
. ......-.+.-+|. +|..... ...|..+|+.+.+. ..++...... .+.. -+
T Consensus 174 ----------~-~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~~~~~~~~~~~~~~~~--------~~~~spd 231 (331)
T 3u4y_A 174 ----------G-GTRPFNITFTPDGNFAFVANLI---GNSIGILETQNPENITLLNAVGTNNLPG--------TIVVSRD 231 (331)
T ss_dssp ----------S-SSSEEEEEECTTSSEEEEEETT---TTEEEEEECSSTTSCEEEEEEECSSCCC--------CEEECTT
T ss_pred ----------C-CCCccceEECCCCCEEEEEeCC---CCeEEEEECCCCcccceeeeccCCCCCc--------eEEECCC
Confidence 0 00001112223566 4444322 35799999987664 2233221111 1222 36
Q ss_pred CeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCC-CCC-CcceeeEEEEEeCCcEEEEEEcC-cEEEEEECCCCcE
Q 046902 262 GCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPT-PTR-SFLFLRPLGYSRNGVKLLLEVRR-EKLVWFDLETNSL 338 (393)
Q Consensus 262 G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~-~~~-~~~~~~~~~~~~~g~~i~l~~~~-~~l~~yd~~t~~~ 338 (393)
|+..++.......+.+|-++. .....+..+...- ..+ .......+++.++|..+++.... +.+..||++++..
T Consensus 232 g~~l~v~~~~~~~i~~~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 232 GSTVYVLTESTVDVFNFNQLS----GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp SSEEEEECSSEEEEEEEETTT----TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred CCEEEEEEcCCCEEEEEECCC----CceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 664333333333566655432 2333344444220 001 11112346888899888887653 4799999999887
Q ss_pred EEE
Q 046902 339 RTV 341 (393)
Q Consensus 339 ~~v 341 (393)
..+
T Consensus 308 ~~~ 310 (331)
T 3u4y_A 308 GYV 310 (331)
T ss_dssp EEC
T ss_pred cce
Confidence 765
No 97
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=87.00 E-value=14 Score=31.76 Aligned_cols=197 Identities=12% Similarity=0.016 Sum_probs=95.5
Q ss_pred EeeeeeceEEEeeC-CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEe-ec----------
Q 046902 95 VLGSCNGLIALCNS-VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHF-KG---------- 162 (393)
Q Consensus 95 ~~~s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~-~~---------- 162 (393)
+.-+.+|-+++... ...+.++||.+++...+.... .... ......+.+|+... ++..... ..
T Consensus 74 l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~--~~~~-~~~~~~i~~d~~G~---l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 74 HCLNKQGHLIACSHGLRRLERQREPGGEWESIADSF--EGKK-LNSPNDVCLAPDGS---LWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp EEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEE--TTEE-CCCCCCEEECTTSC---EEEEECSHHHHCGGGSSCCC
T ss_pred eeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeecc--CCCC-CCCCCCEEECCCCC---EEEECCcccccccccccccc
Confidence 33345676665553 467999999999877664322 0000 01112355666432 2221100 00
Q ss_pred CCCCccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECC-Ccee-e
Q 046902 163 NDGDDVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLV-AEEF-Y 238 (393)
Q Consensus 163 ~~~~~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~-~e~~-~ 238 (393)
.+.....+..|+.. +.-+.+.... ....++. -+|.+++... ....|..||+. +.++ .
T Consensus 148 ~~~~~~~l~~~~~~-g~~~~~~~~~---------------~~~~gi~~s~dg~~lv~~~---~~~~i~~~~~~~~g~~~~ 208 (296)
T 3e5z_A 148 MELPGRWVFRLAPD-GTLSAPIRDR---------------VKPNGLAFLPSGNLLVSDT---GDNATHRYCLNARGETEY 208 (296)
T ss_dssp CCSSSCEEEEECTT-SCEEEEECCC---------------SSEEEEEECTTSCEEEEET---TTTEEEEEEECSSSCEEE
T ss_pred ccCCCcEEEEECCC-CCEEEeecCC---------------CCCccEEECCCCCEEEEeC---CCCeEEEEEECCCCcCcC
Confidence 00012245555544 4443332110 1112333 3577664432 23579999986 4444 1
Q ss_pred ---eecCCCcccccCCceeEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEE-E
Q 046902 239 ---QLPLPDSVNVSYANVHVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGY-S 313 (393)
Q Consensus 239 ---~i~lP~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-~ 313 (393)
.+..... . ...++. .+|.|++.. . ..+.+|-.+ + . ....+..... ..-+++ .
T Consensus 209 ~~~~~~~~~~-----~--p~~i~~d~~G~l~v~~--~-~~v~~~~~~--g---~--~~~~~~~~~~------~~~~~f~~ 265 (296)
T 3e5z_A 209 QGVHFTVEPG-----K--TDGLRVDAGGLIWASA--G-DGVHVLTPD--G---D--ELGRVLTPQT------TSNLCFGG 265 (296)
T ss_dssp EEEEECCSSS-----C--CCSEEEBTTSCEEEEE--T-TEEEEECTT--S---C--EEEEEECSSC------CCEEEEES
T ss_pred CCeEeeCCCC-----C--CCeEEECCCCCEEEEc--C-CeEEEECCC--C---C--EEEEEECCCC------ceeEEEEC
Confidence 1211110 0 012333 488888877 2 356555432 2 2 2233333221 223445 3
Q ss_pred eCCcEEEEEEcCcEEEEEECCCCcEEE
Q 046902 314 RNGVKLLLEVRREKLVWFDLETNSLRT 340 (393)
Q Consensus 314 ~~g~~i~l~~~~~~l~~yd~~t~~~~~ 340 (393)
++++.|++...+ .++.+++++++++.
T Consensus 266 ~d~~~L~v~t~~-~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 266 PEGRTLYMTVST-EFWSIETNVRGLEH 291 (296)
T ss_dssp TTSCEEEEEETT-EEEEEECSCCBCCC
T ss_pred CCCCEEEEEcCC-eEEEEEcccccccc
Confidence 577778887764 69999999998764
No 98
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=86.99 E-value=16 Score=32.59 Aligned_cols=118 Identities=12% Similarity=0.110 Sum_probs=60.5
Q ss_pred CceEEEeccCCCCCcEEEEEECCCcee-eeecCCCccc--------ccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEE
Q 046902 211 GGALHWVSPKSSTRSVIVAFDLVAEEF-YQLPLPDSVN--------VSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMM 280 (393)
Q Consensus 211 ~G~lyw~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~--------~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l 280 (393)
+|.+...+..+.....|..+|+.+.+. ..+..|.... . ... -..+.-. +|.+.+....+. .+.||-+
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-v~~~~~~~~~~~l~~~~~dg-~i~iwd~ 320 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH-SSW-VMSLSFNDSGETLCSAGWDG-KLRFWDV 320 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSB-SSC-EEEEEECSSSSEEEEEETTS-EEEEEET
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccccc-CCc-EEEEEECCCCCEEEEEeCCC-eEEEEEc
Confidence 455444443311115799999876543 3344321100 0 111 1233332 566655555444 8999977
Q ss_pred eecCCCCCeEEEEEeeCCCCC-CC---------------cceeeEEEEEeCC----------cEEEEEEcCcEEEEEECC
Q 046902 281 KEHAVKESWTKLFSVQEPTPT-RS---------------FLFLRPLGYSRNG----------VKLLLEVRREKLVWFDLE 334 (393)
Q Consensus 281 ~~~~~~~~W~~~~~i~~~~~~-~~---------------~~~~~~~~~~~~g----------~~i~l~~~~~~l~~yd~~ 334 (393)
+. ...+..+...... .. .....-+.+.++| ..|+....++.+..||++
T Consensus 321 ~~------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 321 KT------KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp TT------TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred CC------CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 53 3445555521000 00 1124456777776 567777777789999998
Q ss_pred CCc
Q 046902 335 TNS 337 (393)
Q Consensus 335 t~~ 337 (393)
+++
T Consensus 395 ~g~ 397 (397)
T 1sq9_A 395 GGK 397 (397)
T ss_dssp C--
T ss_pred CCC
Confidence 764
No 99
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=86.94 E-value=15 Score=32.10 Aligned_cols=197 Identities=11% Similarity=0.067 Sum_probs=94.9
Q ss_pred eEEEeeCCceEEEEeccccc--eeccCCCCCCCCCCCCceEEEEeeeCC-CCCeEEEEEEEeecCCCCccEEEEEEeCCC
Q 046902 102 LIALCNSVQELALFNPSTRK--LKTLPLPPCLVGFPSAFTFYGFGQDKI-NDDYKLVRVLHFKGNDGDDVEVEVYSLKTN 178 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~--~~~LP~~~~~~~~~~~~~~~~~g~d~~-~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~ 178 (393)
+|+....+..+.|||..+++ ...+.... .. .......+.+.+. +.+-+.+.... ....+.+|+.+++
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~--~~--~~~~v~~~~~~~~~~~~~~~l~~~~------~d~~i~i~d~~~~ 200 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDDPVANMEPVQ--GE--NKRDCWTVAFGNAYNQEERVVCAGY------DNGDIKLFDLRNM 200 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSSCSEEECCCT--TS--CCCCEEEEEEECCCC-CCCEEEEEE------TTSEEEEEETTTT
T ss_pred EEEEEeCCCeEEEEeCCCCCCcceeccccC--CC--CCCceEEEEEEeccCCCCCEEEEEc------cCCeEEEEECccC
Confidence 44444456789999998875 33333222 10 0112233332221 11112233222 2357889998876
Q ss_pred CeEEccccCcccccccccccccccccCceeEe-----CceEEEeccCCCCCcEEEEEECCCceeee-ec---CCCccccc
Q 046902 179 SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA-----GGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LP---LPDSVNVS 249 (393)
Q Consensus 179 ~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~-----~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~---lP~~~~~~ 249 (393)
.=....... ....++.. +|.....+.. ...|..+|+.+..... +. +....
T Consensus 201 ~~~~~~~~~---------------~~v~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~--- 259 (357)
T 3i2n_A 201 ALRWETNIK---------------NGVCSLEFDRKDISMNKLVATSL---EGKFHVFDMRTQHPTKGFASVSEKAHK--- 259 (357)
T ss_dssp EEEEEEECS---------------SCEEEEEESCSSSSCCEEEEEES---TTEEEEEEEEEEETTTEEEEEEEECCS---
T ss_pred ceeeecCCC---------------CceEEEEcCCCCCCCCEEEEECC---CCeEEEEeCcCCCcccceeeeccCCCc---
Confidence 532221111 01111222 4454444433 3578888887643211 11 11111
Q ss_pred CCceeEEEEEe-CCe-EEEEEEcCCCeEEEEEEeecCC-------------CCCeEEEEEeeCCCCCCCcceeeEEEEEe
Q 046902 250 YANVHVDVGSL-EGC-LCVFRFYNLVYVDMWMMKEHAV-------------KESWTKLFSVQEPTPTRSFLFLRPLGYSR 314 (393)
Q Consensus 250 ~~~~~~~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~-------------~~~W~~~~~i~~~~~~~~~~~~~~~~~~~ 314 (393)
.. -..+.-. +|. +.+.... +..+.||.++.... ...+..+..+.... ....-+++.+
T Consensus 260 -~~-v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~v~~~~~s~ 331 (357)
T 3i2n_A 260 -ST-VWQVRHLPQNRELFLTAGG-AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST-----QPISSLDWSP 331 (357)
T ss_dssp -SC-EEEEEEETTEEEEEEEEET-TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS-----SCEEEEEECS
T ss_pred -CC-EEEEEECCCCCcEEEEEeC-CCcEEEeecCCCcccccccCCCCccccccccceeeccccCC-----CCeeEEEEcC
Confidence 11 1133333 566 4444444 44999999985321 12355565555321 1234567778
Q ss_pred CCcEEEE-EEcCcEEEEEECCCCc
Q 046902 315 NGVKLLL-EVRREKLVWFDLETNS 337 (393)
Q Consensus 315 ~g~~i~l-~~~~~~l~~yd~~t~~ 337 (393)
+|..+++ ...++.+..||+.+.+
T Consensus 332 ~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 332 DKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp SSTTEEEEEETTSEEEEEEECC--
T ss_pred CCCeEEEEecCCCcEEEEECCCcc
Confidence 8877764 5556789999988643
No 100
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=86.86 E-value=14 Score=33.19 Aligned_cols=200 Identities=9% Similarity=-0.021 Sum_probs=95.7
Q ss_pred ceEEEeeCCceEEEEeccccc------eeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEE
Q 046902 101 GLIALCNSVQELALFNPSTRK------LKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYS 174 (393)
Q Consensus 101 GLl~~~~~~~~~~V~NP~T~~------~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vys 174 (393)
.+|+....+..+.|||..+++ ........ .........+.+.+..+.+ ++... ....+.+|+
T Consensus 127 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~-l~~~~-------~dg~v~iwd 194 (416)
T 2pm9_A 127 NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS----MSSVDEVISLAWNQSLAHV-FASAG-------SSNFASIWD 194 (416)
T ss_dssp TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS----CCSSCCCCEEEECSSCTTE-EEEES-------SSSCEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCccccccccccccccc----cCCCCCeeEEEeCCCCCcE-EEEEc-------CCCCEEEEE
Confidence 345444456789999998876 22211110 0111223345566553333 22221 234588899
Q ss_pred eCCCCeEEccccCcccccccccccccccccCceeEe--Cc-eEEEeccCCCCCcEEEEEECCCceeeeecCC-CcccccC
Q 046902 175 LKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GG-ALHWVSPKSSTRSVIVAFDLVAEEFYQLPLP-DSVNVSY 250 (393)
Q Consensus 175 s~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G-~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP-~~~~~~~ 250 (393)
.+++.-...-..... ..........+.+ +| .+...+..+.....|..+|+.+..-....+. ...
T Consensus 195 ~~~~~~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~---- 262 (416)
T 2pm9_A 195 LKAKKEVIHLSYTSP--------NSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQ---- 262 (416)
T ss_dssp TTTTEEEEEECCCCC--------SSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCS----
T ss_pred CCCCCcceEEecccc--------ccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCcc----
Confidence 887654322111100 0000001111222 23 3343333311112688889887432111121 111
Q ss_pred CceeEEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCC-cEEEEEEcCcE
Q 046902 251 ANVHVDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNG-VKLLLEVRREK 327 (393)
Q Consensus 251 ~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g-~~i~l~~~~~~ 327 (393)
.. -..+.-. +|.+.+....+. .+.||-++. ...+..+.... ....-+.+.+++ ..++....++.
T Consensus 263 ~~-v~~~~~s~~~~~~l~s~~~dg-~v~~wd~~~------~~~~~~~~~~~-----~~v~~~~~s~~~~~~l~s~~~d~~ 329 (416)
T 2pm9_A 263 KG-ILSLDWCHQDEHLLLSSGRDN-TVLLWNPES------AEQLSQFPARG-----NWCFKTKFAPEAPDLFACASFDNK 329 (416)
T ss_dssp SC-EEEEEECSSCSSCEEEEESSS-EEEEECSSS------CCEEEEEECSS-----SCCCCEEECTTCTTEEEECCSSSE
T ss_pred Cc-eeEEEeCCCCCCeEEEEeCCC-CEEEeeCCC------CccceeecCCC-----CceEEEEECCCCCCEEEEEecCCc
Confidence 11 1233332 677766666544 899998764 12344444211 123346777777 56666666678
Q ss_pred EEEEECCCCc
Q 046902 328 LVWFDLETNS 337 (393)
Q Consensus 328 l~~yd~~t~~ 337 (393)
+..||+.+.+
T Consensus 330 i~iw~~~~~~ 339 (416)
T 2pm9_A 330 IEVQTLQNLT 339 (416)
T ss_dssp EEEEESCCCC
T ss_pred EEEEEccCCC
Confidence 9999998865
No 101
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.58 E-value=17 Score=32.47 Aligned_cols=111 Identities=9% Similarity=0.032 Sum_probs=58.7
Q ss_pred eeceEEEeeCCceEEEEeccccceeccCCCCCCCCC---CCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEe
Q 046902 99 CNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGF---PSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSL 175 (393)
Q Consensus 99 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~---~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss 175 (393)
.+|.|.+......++.+|+.|++.+.--........ ...........+. =+|+... ....+..++.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~v~~-------~~g~l~a~d~ 120 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSG----GHVYIGS-------EKAQVYALNT 120 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEET----TEEEEEE-------TTSEEEEEET
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeC----CEEEEEc-------CCCEEEEEEC
Confidence 467777765566789999998875421111100000 0111112222221 1333322 2346788888
Q ss_pred CCC--CeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCce--eee
Q 046902 176 KTN--SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEE--FYQ 239 (393)
Q Consensus 176 ~t~--~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~--~~~ 239 (393)
.++ .|+.-..-. ....++..+|.+|..... ..|.+||..+.+ |+.
T Consensus 121 ~tG~~~W~~~~~~~---------------~~~~p~~~~~~v~v~~~~----g~l~~~d~~tG~~~W~~ 169 (376)
T 3q7m_A 121 SDGTVAWQTKVAGE---------------ALSRPVVSDGLVLIHTSN----GQLQALNEADGAVKWTV 169 (376)
T ss_dssp TTCCEEEEEECSSC---------------CCSCCEEETTEEEEECTT----SEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEeCCCc---------------eEcCCEEECCEEEEEcCC----CeEEEEECCCCcEEEEE
Confidence 776 476532111 123356778888876543 589999997654 554
No 102
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=86.45 E-value=1.5 Score=39.56 Aligned_cols=141 Identities=12% Similarity=0.069 Sum_probs=68.6
Q ss_pred cEEEEEEeCCCCeEEccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCce-eeee-cCC
Q 046902 168 VEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEE-FYQL-PLP 243 (393)
Q Consensus 168 ~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~-~~~i-~lP 243 (393)
..+.+|+..++.|+.+..+.. +.. .-..+. -+|.+...+.. ...|..+|+.+.. +... .+.
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~----------h~~--~v~~~~~s~~~~~l~s~s~---d~~v~vwd~~~~~~~~~~~~~~ 97 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSD----------HDK--IVTCVDWAPKSNRIVTCSQ---DRNAYVYEKRPDGTWKQTLVLL 97 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCC----------CSS--CEEEEEECTTTCCEEEEET---TSSEEEC------CCCCEEECC
T ss_pred CEEEEEEccCCceEEEEEEec----------CCc--eEEEEEEeCCCCEEEEEeC---CCeEEEEEcCCCCceeeeeEec
Confidence 457788888888877655431 110 111121 23433333222 2468888888776 3332 121
Q ss_pred CcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEE
Q 046902 244 DSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLE 322 (393)
Q Consensus 244 ~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~ 322 (393)
... ... ..+.-. +|.+.+.+..+. .+.||-++. ...|.....+.... .....-+.+.++|..++..
T Consensus 98 ~~~----~~v-~~~~~~~~~~~l~~~~~d~-~i~iwd~~~---~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 98 RLN----RAA-TFVRWSPNEDKFAVGSGAR-VISVCYFEQ---ENDWWVSKHLKRPL----RSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp CCS----SCE-EEEECCTTSSCCEEEESSS-CEEECCC--------CCCCEEECSSC----CSCEEEEEECTTSSEEEEE
T ss_pred ccC----Cce-EEEEECCCCCEEEEEecCC-eEEEEEECC---cccceeeeEeeccc----CCCeEEEEEcCCCCEEEEE
Confidence 111 111 122222 666666655544 899998875 23455555554311 1124456777788877777
Q ss_pred EcCcEEEEEECCCC
Q 046902 323 VRREKLVWFDLETN 336 (393)
Q Consensus 323 ~~~~~l~~yd~~t~ 336 (393)
..++.+..||++++
T Consensus 165 ~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 165 CADRKAYVLSAYVR 178 (377)
T ss_dssp ESSSCEEEEEECCS
T ss_pred eCCCEEEEEEEEec
Confidence 77777999998643
No 103
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=86.30 E-value=14 Score=31.23 Aligned_cols=161 Identities=10% Similarity=0.056 Sum_probs=83.0
Q ss_pred EEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEe---CceEEE
Q 046902 140 FYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHW 216 (393)
Q Consensus 140 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw 216 (393)
..++.+|+..+. ++.... ....+.+|+..++.-+.+.... . ....++.+ +|.+||
T Consensus 38 ~~gi~~d~~~~~--ly~~d~------~~~~I~~~~~~g~~~~~~~~~~------------~--~~p~~ia~d~~~~~lyv 95 (267)
T 1npe_A 38 IIGLAFDCVDKV--VYWTDI------SEPSIGRASLHGGEPTTIIRQD------------L--GSPEGIALDHLGRTIFW 95 (267)
T ss_dssp EEEEEEETTTTE--EEEEET------TTTEEEEEESSSCCCEEEECTT------------C--CCEEEEEEETTTTEEEE
T ss_pred EEEEEEecCCCE--EEEEEC------CCCEEEEEecCCCCcEEEEECC------------C--CCccEEEEEecCCeEEE
Confidence 467888876543 333221 2346788887665322221100 0 11223433 589999
Q ss_pred eccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEE
Q 046902 217 VSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFS 294 (393)
Q Consensus 217 ~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~ 294 (393)
.... ...|..+|+....-..+ .+.... .. ..++.. +|.||+...... .-.|+++.-++. -.+.
T Consensus 96 ~d~~---~~~I~~~~~~g~~~~~~-~~~~~~---~P--~~i~vd~~~g~lyv~~~~~~-~~~I~~~~~dg~---~~~~-- 160 (267)
T 1npe_A 96 TDSQ---LDRIEVAKMDGTQRRVL-FDTGLV---NP--RGIVTDPVRGNLYWTDWNRD-NPKIETSHMDGT---NRRI-- 160 (267)
T ss_dssp EETT---TTEEEEEETTSCSCEEE-ECSSCS---SE--EEEEEETTTTEEEEEECCSS-SCEEEEEETTSC---CCEE--
T ss_pred EECC---CCEEEEEEcCCCCEEEE-EECCCC---Cc--cEEEEeeCCCEEEEEECCCC-CcEEEEEecCCC---CcEE--
Confidence 8543 46899999875443333 122211 11 234443 688888875421 223444443231 1111
Q ss_pred eeCCCCCCCcceeeEEEEEeCCcEEEEEEcC-cEEEEEECCCCcEEEE
Q 046902 295 VQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR-EKLVWFDLETNSLRTV 341 (393)
Q Consensus 295 i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~yd~~t~~~~~v 341 (393)
+.... .....-+++.++++.||+.... ..+..+|++++..+.+
T Consensus 161 ~~~~~----~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 161 LAQDN----LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp EECTT----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred EEECC----CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 11111 1123445666667788887643 5799999998665544
No 104
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=86.10 E-value=18 Score=32.25 Aligned_cols=189 Identities=7% Similarity=-0.041 Sum_probs=90.4
Q ss_pred eeeceEEEe-eCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeC
Q 046902 98 SCNGLIALC-NSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLK 176 (393)
Q Consensus 98 s~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~ 176 (393)
+.+|-.++. ..+..+.|||..+++....-... ......+.+.+..+.+ ++... ....+.+|+.+
T Consensus 148 spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h-------~~~v~~v~~s~~~~~~-~~s~~-------~dg~v~~wd~~ 212 (357)
T 4g56_B 148 FSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAH-------SSEVNCVAACPGKDTI-FLSCG-------EDGRILLWDTR 212 (357)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEECTTCSSC-EEEEE-------TTSCEEECCTT
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC-------CCCEEEEEEccCCCce-eeeec-------cCCceEEEECC
Confidence 445644443 35667999999988755422211 1123345555544333 22222 23357788877
Q ss_pred CCCeEEccccCcccccccccccccccccCceeEe---CceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCc
Q 046902 177 TNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYAN 252 (393)
Q Consensus 177 t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~ 252 (393)
++.-....... .......++.. ++.+...+.. ...|..+|+.+.+... +..... .
T Consensus 213 ~~~~~~~~~~~------------~~~~~v~~v~~sp~~~~~la~g~~---d~~i~~wd~~~~~~~~~~~~~~~------~ 271 (357)
T 4g56_B 213 KPKPATRIDFC------------ASDTIPTSVTWHPEKDDTFACGDE---TGNVSLVNIKNPDSAQTSAVHSQ------N 271 (357)
T ss_dssp SSSCBCBCCCT------------TCCSCEEEEEECTTSTTEEEEEES---SSCEEEEESSCGGGCEEECCCSS------C
T ss_pred CCceeeeeeec------------cccccccchhhhhcccceEEEeec---ccceeEEECCCCcEeEEEeccce------e
Confidence 66432111110 00011112222 2333333322 3468889987754322 222211 1
Q ss_pred eeEEEEEe-CC-eEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEe-CCcEEEEEEcCcEEE
Q 046902 253 VHVDVGSL-EG-CLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSR-NGVKLLLEVRREKLV 329 (393)
Q Consensus 253 ~~~~l~~~-~G-~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~-~g~~i~l~~~~~~l~ 329 (393)
-..+.-. +| .+.+.+.. +..+.||-++. -..+..+... ....-+++++ ++..|+-...++.+.
T Consensus 272 -v~~l~~sp~~~~~lasgs~-D~~i~iwd~~~------~~~~~~~~H~------~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 272 -ITGLAYSYHSSPFLASISE-DCTVAVLDADF------SEVFRDLSHR------DFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp -EEEEEECSSSSCCEEEEET-TSCEEEECTTS------CEEEEECCCS------SCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred -EEEEEEcCCCCCEEEEEeC-CCEEEEEECCC------CcEeEECCCC------CCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 1133332 45 44444443 44899996542 1233333221 1244567776 677666566667799
Q ss_pred EEECCCC
Q 046902 330 WFDLETN 336 (393)
Q Consensus 330 ~yd~~t~ 336 (393)
.||+.++
T Consensus 338 iW~~~~~ 344 (357)
T 4g56_B 338 HHHLPSE 344 (357)
T ss_dssp EEECC--
T ss_pred EEECCCC
Confidence 9998764
No 105
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=86.03 E-value=16 Score=31.42 Aligned_cols=197 Identities=9% Similarity=-0.029 Sum_probs=103.4
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
|+........++++||.++ ...+..+. ....++.+++... +++... ....+.+|+..++..+
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~--------~~~~~l~~~~dg~---l~v~~~------~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPS--------HHQNGHCLNKQGH---LIACSH------GLRRLERQREPGGEWE 103 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSC--------SSEEEEEECTTCC---EEEEET------TTTEEEEECSTTCCEE
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCC--------CCcceeeECCCCc---EEEEec------CCCeEEEEcCCCCcEE
Confidence 4444434568999999998 55554322 1235677777543 332221 2356888998888877
Q ss_pred EccccCcccccccccccccccccCceeEeCceEEEec----c----------CCCCCcEEEEEECCCceeeeecCCCccc
Q 046902 182 RISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVS----P----------KSSTRSVIVAFDLVAEEFYQLPLPDSVN 247 (393)
Q Consensus 182 ~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~----~----------~~~~~~~il~fD~~~e~~~~i~lP~~~~ 247 (393)
.+...... ........-.+.-+|.+|+.. . .......|..+|.. .+...+.-...
T Consensus 104 ~~~~~~~~--------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~-- 172 (296)
T 3e5z_A 104 SIADSFEG--------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV-- 172 (296)
T ss_dssp EEECEETT--------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS--
T ss_pred EEeeccCC--------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC--
Confidence 65321100 000001111223468877641 1 00112479999987 55544421111
Q ss_pred ccCCceeEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCe-EEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC
Q 046902 248 VSYANVHVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESW-TKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR 325 (393)
Q Consensus 248 ~~~~~~~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~ 325 (393)
. ...++. -+|++. +.......+.+|.++.. ... .....+.. . .....-+++.++|. |++.. .
T Consensus 173 ---~--~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~---g~~~~~~~~~~~-~----~~~p~~i~~d~~G~-l~v~~-~ 236 (296)
T 3e5z_A 173 ---K--PNGLAFLPSGNLL-VSDTGDNATHRYCLNAR---GETEYQGVHFTV-E----PGKTDGLRVDAGGL-IWASA-G 236 (296)
T ss_dssp ---S--EEEEEECTTSCEE-EEETTTTEEEEEEECSS---SCEEEEEEEECC-S----SSCCCSEEEBTTSC-EEEEE-T
T ss_pred ---C--CccEEECCCCCEE-EEeCCCCeEEEEEECCC---CcCcCCCeEeeC-C----CCCCCeEEECCCCC-EEEEc-C
Confidence 0 112333 367766 44444447777777632 334 22233311 1 01123466777876 66666 5
Q ss_pred cEEEEEECCCCcEEEEEE
Q 046902 326 EKLVWFDLETNSLRTVKI 343 (393)
Q Consensus 326 ~~l~~yd~~t~~~~~v~~ 343 (393)
..+..||++++.+..+..
T Consensus 237 ~~v~~~~~~g~~~~~~~~ 254 (296)
T 3e5z_A 237 DGVHVLTPDGDELGRVLT 254 (296)
T ss_dssp TEEEEECTTSCEEEEEEC
T ss_pred CeEEEECCCCCEEEEEEC
Confidence 679999999887777755
No 106
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=85.95 E-value=15 Score=31.21 Aligned_cols=190 Identities=11% Similarity=0.131 Sum_probs=96.6
Q ss_pred eeeceEEEeeC--CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEe
Q 046902 98 SCNGLIALCNS--VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSL 175 (393)
Q Consensus 98 s~~GLl~~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss 175 (393)
..+|.|.+... ...+.++|+..+....+.... .....++.+|+... ++.... ....+.+|+.
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~-------~~~~~~i~~~~~g~---l~v~~~------~~~~i~~~~~ 149 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATI-------LQHPRGVTVDNKGR---IIVVEC------KVMRVIIFDQ 149 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTT-------CSCEEEEEECTTSC---EEEEET------TTTEEEEECT
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCcc-------CCCceEEEEeCCCC---EEEEEC------CCCEEEEEcC
Confidence 35777766653 567999996555444443322 12235677777542 332221 2346777876
Q ss_pred CCCCeEEccccCcccccccccccccccccCceeEe--CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCce
Q 046902 176 KTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANV 253 (393)
Q Consensus 176 ~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~ 253 (393)
....-+.+.... .. ....++.+ +|.+|..... ...|..||...+....+..+.... .
T Consensus 150 ~g~~~~~~~~~~-----------~~--~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~g~~~~~~~~~g~~~---~-- 208 (286)
T 1q7f_A 150 NGNVLHKFGCSK-----------HL--EFPNGVVVNDKQEIFISDNR---AHCVKVFNYEGQYLRQIGGEGITN---Y-- 208 (286)
T ss_dssp TSCEEEEEECTT-----------TC--SSEEEEEECSSSEEEEEEGG---GTEEEEEETTCCEEEEESCTTTSC---S--
T ss_pred CCCEEEEeCCCC-----------cc--CCcEEEEECCCCCEEEEECC---CCEEEEEcCCCCEEEEEccCCccC---C--
Confidence 543333321101 00 11223433 5787765432 358999998776666554432111 1
Q ss_pred eEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEE
Q 046902 254 HVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFD 332 (393)
Q Consensus 254 ~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 332 (393)
...++. -+|.|++........+.+|-. . ..-. ..+..... .....-+++.++|. +++...+..+..|+
T Consensus 209 p~~i~~d~~G~l~v~~~~~~~~i~~~~~--~---g~~~--~~~~~~~~---~~~~~~i~~~~~g~-l~vs~~~~~v~v~~ 277 (286)
T 1q7f_A 209 PIGVGINSNGEILIADNHNNFNLTIFTQ--D---GQLI--SALESKVK---HAQCFDVALMDDGS-VVLASKDYRLYIYR 277 (286)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECT--T---SCEE--EEEEESSC---CSCEEEEEEETTTE-EEEEETTTEEEEEE
T ss_pred CcEEEECCCCCEEEEeCCCCEEEEEECC--C---CCEE--EEEcccCC---CCcceeEEECCCCc-EEEECCCCeEEEEE
Confidence 123444 378888877543226777742 1 2222 22222110 01123466677774 66665566788887
Q ss_pred CCC
Q 046902 333 LET 335 (393)
Q Consensus 333 ~~t 335 (393)
...
T Consensus 278 ~~~ 280 (286)
T 1q7f_A 278 YVQ 280 (286)
T ss_dssp CSC
T ss_pred ccc
Confidence 754
No 107
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=85.89 E-value=16 Score=31.48 Aligned_cols=189 Identities=14% Similarity=0.146 Sum_probs=95.8
Q ss_pred EEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEE
Q 046902 103 IALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRR 182 (393)
Q Consensus 103 l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~ 182 (393)
|+....+..+.||+..+++....-... ......+.+.|..+ .++... ....+.+|+.+++.-..
T Consensus 38 l~s~~~dg~i~iw~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~--~l~s~~-------~d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 38 LASSSADKLIKIWGAYDGKFEKTISGH-------KLGISDVAWSSDSN--LLVSAS-------DDKTLKIWDVSSGKCLK 101 (312)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCC-------SSCEEEEEECTTSS--EEEEEE-------TTSEEEEEETTTCCEEE
T ss_pred EEEeeCCCeEEEEeCCCcccchhhccC-------CCceEEEEEcCCCC--EEEEEC-------CCCEEEEEECCCCcEEE
Confidence 333334567889998887755432211 22344566666432 222222 24578899988764221
Q ss_pred ccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEEEEE-e
Q 046902 183 ISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVGS-L 260 (393)
Q Consensus 183 ~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~~-~ 260 (393)
. +. .+......-...-+|.+...+.. ...|..+|+.+.+... +..... .. ..+.- -
T Consensus 102 ~--~~----------~~~~~v~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~------~v-~~~~~~~ 159 (312)
T 4ery_A 102 T--LK----------GHSNYVFCCNFNPQSNLIVSGSF---DESVRIWDVKTGKCLKTLPAHSD------PV-SAVHFNR 159 (312)
T ss_dssp E--EE----------CCSSCEEEEEECSSSSEEEEEET---TSCEEEEETTTCCEEEEECCCSS------CE-EEEEECT
T ss_pred E--Ec----------CCCCCEEEEEEcCCCCEEEEEeC---CCcEEEEECCCCEEEEEecCCCC------cE-EEEEEcC
Confidence 1 11 00000000001112333322222 3568899988765432 222111 11 12222 3
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEE
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 340 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~ 340 (393)
+|.+.+....+. .+.+|-+.. . .....+.... .....-+.+.++|..++....++.+..||+.+.+...
T Consensus 160 ~~~~l~~~~~d~-~i~~wd~~~----~--~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 160 DGSLIVSSSYDG-LCRIWDTAS----G--QCLKTLIDDD----NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp TSSEEEEEETTS-CEEEEETTT----C--CEEEEECCSS----CCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEE
T ss_pred CCCEEEEEeCCC-cEEEEECCC----C--ceeeEEeccC----CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 677666665544 899998763 1 1222222111 1123446777888888887777789999999987543
No 108
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=85.82 E-value=20 Score=32.38 Aligned_cols=101 Identities=11% Similarity=0.129 Sum_probs=53.5
Q ss_pred cEEEEEECCCcee--eeecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCC-CCC
Q 046902 225 SVIVAFDLVAEEF--YQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEP-TPT 301 (393)
Q Consensus 225 ~~il~fD~~~e~~--~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~-~~~ 301 (393)
..|..+|+.+... ..+..... .. ...+...+|.+.+.... +..+.||.+...+.. ... ..+... ...
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~-----~~-v~~~~~~~~~~l~s~~~-d~~v~iw~~~~~~~~--~~~-~~~~~~~~~~ 382 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEG-----TP-INNVYFAAGALFVSSGF-DTSIKLDIISDPESE--RPA-IEFETPTFLV 382 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTT-----SC-EEEEEEETTEEEEEETT-TEEEEEEEECCTTCC--SCE-ECTTSCEEEC
T ss_pred CeEEEEEcCCCcCchhhhhccCC-----CC-ceEEEeCCCCEEEEecC-CccEEEEeccCCCCC--ccc-eeccCccEEc
Confidence 5799999987542 22322111 11 12334457775555544 449999999863211 111 101100 000
Q ss_pred CCcceeeEEEEEeCCc---EEEEEEcCcEEEEEECCC
Q 046902 302 RSFLFLRPLGYSRNGV---KLLLEVRREKLVWFDLET 335 (393)
Q Consensus 302 ~~~~~~~~~~~~~~g~---~i~l~~~~~~l~~yd~~t 335 (393)
.......-+++.++|. .++.....+.+..|+++.
T Consensus 383 ~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 383 SNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 1111244567777776 677766667788899875
No 109
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=85.17 E-value=21 Score=32.20 Aligned_cols=202 Identities=15% Similarity=0.130 Sum_probs=97.6
Q ss_pred eeece-EEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeC
Q 046902 98 SCNGL-IALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLK 176 (393)
Q Consensus 98 s~~GL-l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~ 176 (393)
+.+|- |+....+..+.|||..+++....-... ......+.+.|... .++... ....+.+|+.+
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h-------~~~v~~~~~~p~~~--~l~s~s-------~d~~v~iwd~~ 195 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGH-------EQDIYSLDYFPSGD--KLVSGS-------GDRTVRIWDLR 195 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEECTTSS--EEEEEE-------TTSEEEEEETT
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEccC-------CCCEEEEEEcCCCC--EEEEec-------CCCcEEEEECC
Confidence 33553 444445678999999988755432211 22345566766543 233322 24578899988
Q ss_pred CCCeEEccccCcccccccccccccccccCceeEe---CceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCc
Q 046902 177 TNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYAN 252 (393)
Q Consensus 177 t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~ 252 (393)
++.-...-... .....+.+ +|.+...+.. ...|..+|+.+..... +..+.........
T Consensus 196 ~~~~~~~~~~~---------------~~v~~~~~~~~~~~~l~~~s~---d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~ 257 (393)
T 1erj_A 196 TGQCSLTLSIE---------------DGVTTVAVSPGDGKYIAAGSL---DRAVRVWDSETGFLVERLDSENESGTGHKD 257 (393)
T ss_dssp TTEEEEEEECS---------------SCEEEEEECSTTCCEEEEEET---TSCEEEEETTTCCEEEEEC------CCCSS
T ss_pred CCeeEEEEEcC---------------CCcEEEEEECCCCCEEEEEcC---CCcEEEEECCCCcEEEeecccccCCCCCCC
Confidence 77543221111 00011111 4544444332 3468889988765432 3222111000011
Q ss_pred eeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCC------CeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC
Q 046902 253 VHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKE------SWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR 325 (393)
Q Consensus 253 ~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~------~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~ 325 (393)
.-..+.-. +|.+.+....+. .+.||-++...... .......+.- ......-+++.+++..|+-...+
T Consensus 258 ~v~~v~~~~~g~~l~s~s~d~-~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~sgs~D 331 (393)
T 1erj_A 258 SVYSVVFTRDGQSVVSGSLDR-SVKLWNLQNANNKSDSKTPNSGTCEVTYIG-----HKDFVLSVATTQNDEYILSGSKD 331 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTS-EEEEEEC---------------CEEEEEEC-----CSSCEEEEEECGGGCEEEEEETT
T ss_pred CEEEEEECCCCCEEEEEeCCC-EEEEEECCCCCCcccccCCCCCcceEEEec-----ccCcEEEEEECCCCCEEEEEeCC
Confidence 11133332 666655555444 99999887532100 0011111111 01123345666777777767777
Q ss_pred cEEEEEECCCCcEE
Q 046902 326 EKLVWFDLETNSLR 339 (393)
Q Consensus 326 ~~l~~yd~~t~~~~ 339 (393)
+.+..||+++++..
T Consensus 332 ~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 332 RGVLFWDKKSGNPL 345 (393)
T ss_dssp SEEEEEETTTCCEE
T ss_pred CeEEEEECCCCeEE
Confidence 78999999988754
No 110
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=84.61 E-value=31 Score=33.60 Aligned_cols=196 Identities=12% Similarity=-0.017 Sum_probs=99.9
Q ss_pred ceEEEEeccc------cceeccC-CCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCC-CccEEEEEEeC-CCCe
Q 046902 110 QELALFNPST------RKLKTLP-LPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDG-DDVEVEVYSLK-TNSW 180 (393)
Q Consensus 110 ~~~~V~NP~T------~~~~~LP-~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~-~~~~~~Vyss~-t~~W 180 (393)
..++++|..+ ++...|. ... .....+.+.|.. .+ |+.......... ....+.+++.. ++.+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~SpDG-~~-la~~~~~~~~~~~~~~~i~~~d~~~~g~~ 230 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAH--------RFVTGPRLSPDG-RQ-AVWLAWDHPRMPWEGTELKTARVTEDGRF 230 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCS--------SEECCCEECTTS-SE-EEEEEECTTCCTTTCEEEEEEEECTTSCE
T ss_pred eEEEEEECCCCccccCCceeEEEecCC--------CcccCceECCCC-CE-EEEEECCCCCCCCCCcEEEEEEECCCCcc
Confidence 4799999998 7777665 322 112223445433 22 222222111000 23578899998 5744
Q ss_pred EEccccCcccccccccccccccccCceeE-eCceEEEeccCCCCCcEEEEEECCCceeeeec-CCCcccccCCce---eE
Q 046902 181 RRISNLPRFLRDFYDYLYHSLFRKGYGVL-AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLP-LPDSVNVSYANV---HV 255 (393)
Q Consensus 181 ~~~~~~p~~~~~~~~~~~~~~~~~~~~v~-~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~---~~ 255 (393)
.....+.. ..........+ -+|.+|+.+.. +....|..+|+.+.++..+. ...... ...+ ..
T Consensus 231 ~~~~~l~~----------~~~~~~~~~~~spdg~l~~~~~~-~~~~~l~~~~~~~~~~~~l~~~~~~~~--~p~w~~~~~ 297 (662)
T 3azo_A 231 ADTRTLLG----------GPEEAIAQAEWAPDGSLIVATDR-TGWWNLHRVDPATGAATQLCRREEEFA--GPLWTPGMR 297 (662)
T ss_dssp EEEEEEEE----------ETTBCEEEEEECTTSCEEEEECT-TSSCEEEEECTTTCCEEESSCCSSBSS--CCCCSTTCC
T ss_pred cccEEeCC----------CCCceEcceEECCCCeEEEEECC-CCCeEEEEEECCCCceeeccccccccc--CccccccCc
Confidence 33322210 00001111222 37888877654 23458999999887776542 221111 0001 01
Q ss_pred EEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-C---cEEEE
Q 046902 256 DVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-R---EKLVW 330 (393)
Q Consensus 256 ~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~---~~l~~ 330 (393)
.+... +|++.+.... ....||.++-.+ .. ..++.... .....+. ..+++.+++... . ..++.
T Consensus 298 ~~~~~~~~~~~~~~~~--~~~~l~~~d~~~--~~---~~~l~~~~-----~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 298 WFAPLANGLIAVVHGK--GAAVLGILDPES--GE---LVDAAGPW-----TEWAATL-TVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp SEEECTTSCEEEEEBS--SSCEEEEEETTT--TE---EEECCSSC-----CEEEEEE-EEETTEEEEEEEETTEEEEEEE
T ss_pred eEeEeCCCEEEEEEEc--CccEEEEEECCC--Cc---EEEecCCC-----CeEEEEE-ecCCCEEEEEEcCCCCCCEEEE
Confidence 23333 7787766655 588999998532 22 23333211 1122331 445666665532 2 25899
Q ss_pred EECCCCcEEEE
Q 046902 331 FDLETNSLRTV 341 (393)
Q Consensus 331 yd~~t~~~~~v 341 (393)
+|+++++.+.+
T Consensus 365 ~d~~~g~~~~l 375 (662)
T 3azo_A 365 LDTVTGRARTI 375 (662)
T ss_dssp EETTTCCEEEE
T ss_pred EECCCCceEEe
Confidence 99999988776
No 111
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=84.60 E-value=22 Score=31.77 Aligned_cols=71 Identities=13% Similarity=0.134 Sum_probs=40.7
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCC-CCCCcceeeEEEEEeCCcEEEEEEcC---cEEEEEECCCC
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPT-PTRSFLFLRPLGYSRNGVKLLLEVRR---EKLVWFDLETN 336 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~~~~~~g~~i~l~~~~---~~l~~yd~~t~ 336 (393)
+| .++....+..+.||-+.. . ..+..+.... .........-+.+.+++..|+....+ ..+..||+.++
T Consensus 197 ~~--~l~~~~~dg~i~i~d~~~----~--~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 197 RG--LIATGFNNGTVQISELST----L--RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp TS--EEEEECTTSEEEEEETTT----T--EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC
T ss_pred Cc--eEEEEeCCCcEEEEECCC----C--ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 45 444444445899998764 1 2333333200 00000124456777788877777666 67999999887
Q ss_pred cEE
Q 046902 337 SLR 339 (393)
Q Consensus 337 ~~~ 339 (393)
+..
T Consensus 269 ~~~ 271 (397)
T 1sq9_A 269 ERI 271 (397)
T ss_dssp CEE
T ss_pred ccc
Confidence 643
No 112
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=84.55 E-value=18 Score=30.74 Aligned_cols=196 Identities=13% Similarity=0.113 Sum_probs=100.2
Q ss_pred EeeeeeceEEEeeC-CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEE
Q 046902 95 VLGSCNGLIALCNS-VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVY 173 (393)
Q Consensus 95 ~~~s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vy 173 (393)
+....+|-+.+... ...+.++||. ++...++.+. . .....++.+|+... +..... ....+.+|
T Consensus 20 i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~---~---~~~~~~i~~~~~g~---l~v~~~------~~~~i~~~ 83 (299)
T 2z2n_A 20 ITVSDKGKVWITQHKANMISCINLD-GKITEYPLPT---P---DAKVMCLTISSDGE---VWFTEN------AANKIGRI 83 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSS---T---TCCEEEEEECTTSC---EEEEET------TTTEEEEE
T ss_pred eEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCc---c---cCceeeEEECCCCC---EEEeCC------CCCeEEEE
Confidence 44455676666654 4679999998 7766655332 0 12345666776432 222211 12356667
Q ss_pred EeCCCCeEEccccCcccccccccccccccccCceeEe--CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCC
Q 046902 174 SLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYA 251 (393)
Q Consensus 174 ss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 251 (393)
+.. +..+.+. .+. .. ....++.. +|.+|..... ...|..+|. +.+...+..|....
T Consensus 84 ~~~-g~~~~~~-~~~----------~~--~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~-~g~~~~~~~~~~~~---- 141 (299)
T 2z2n_A 84 TKK-GIIKEYT-LPN----------PD--SAPYGITEGPNGDIWFTEMN---GNRIGRITD-DGKIREYELPNKGS---- 141 (299)
T ss_dssp CTT-SCEEEEE-CSS----------TT--CCEEEEEECTTSCEEEEETT---TTEEEEECT-TCCEEEEECSSTTC----
T ss_pred CCC-CcEEEEe-CCC----------cC--CCceeeEECCCCCEEEEecC---CceEEEECC-CCCEEEecCCCCCC----
Confidence 664 4554432 120 00 11223333 5777765432 357999999 66776666553221
Q ss_pred ceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEE
Q 046902 252 NVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLV 329 (393)
Q Consensus 252 ~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~ 329 (393)
. ...++.. +|.|++...... .+ ++++.. ..... ..+.. . .....-+++.++|. +++... ...+.
T Consensus 142 ~-~~~i~~~~~g~l~v~~~~~~-~i--~~~~~~---g~~~~-~~~~~-~----~~~~~~i~~~~~g~-l~v~~~~~~~i~ 207 (299)
T 2z2n_A 142 Y-PSFITLGSDNALWFTENQNN-AI--GRITES---GDITE-FKIPT-P----ASGPVGITKGNDDA-LWFVEIIGNKIG 207 (299)
T ss_dssp C-EEEEEECTTSCEEEEETTTT-EE--EEECTT---CCEEE-EECSS-T----TCCEEEEEECTTSS-EEEEETTTTEEE
T ss_pred C-CceEEEcCCCCEEEEeCCCC-EE--EEEcCC---CcEEE-eeCCC-C----CCcceeEEECCCCC-EEEEccCCceEE
Confidence 1 1244444 788887664322 44 444431 23332 11211 1 11122345555665 666553 45799
Q ss_pred EEECCCCcEEEEEE
Q 046902 330 WFDLETNSLRTVKI 343 (393)
Q Consensus 330 ~yd~~t~~~~~v~~ 343 (393)
.||+ ++++..+..
T Consensus 208 ~~~~-~g~~~~~~~ 220 (299)
T 2z2n_A 208 RITT-SGEITEFKI 220 (299)
T ss_dssp EECT-TCCEEEEEC
T ss_pred EECC-CCcEEEEEC
Confidence 9999 777766533
No 113
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=84.35 E-value=22 Score=32.19 Aligned_cols=71 Identities=7% Similarity=-0.024 Sum_probs=46.5
Q ss_pred CCeEEEEEEcCC------CeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCc-EEEEEE-cCcEEEEEE
Q 046902 261 EGCLCVFRFYNL------VYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGV-KLLLEV-RREKLVWFD 332 (393)
Q Consensus 261 ~G~L~~~~~~~~------~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~-~i~l~~-~~~~l~~yd 332 (393)
+++||+...... ..-.||+++- ...+.+.+|+... ...-+++.++|. .+|... .++.+..||
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~----~t~~vv~~i~~g~------~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD 347 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTG----LVGQTSSQISLGH------DVDAISVAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEEC----CCCEEEEEEECCC------CcCeEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 466777654211 1246888874 4577778887643 245678888988 566554 356799999
Q ss_pred CCCCcEEEE
Q 046902 333 LETNSLRTV 341 (393)
Q Consensus 333 ~~t~~~~~v 341 (393)
.+|.+....
T Consensus 348 ~~t~~vv~~ 356 (373)
T 2mad_H 348 AGAGDQDQS 356 (373)
T ss_pred CCCCCEEee
Confidence 999876543
No 114
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=84.09 E-value=21 Score=31.25 Aligned_cols=182 Identities=9% Similarity=0.114 Sum_probs=92.5
Q ss_pred eCCceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccc
Q 046902 107 NSVQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISN 185 (393)
Q Consensus 107 ~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~ 185 (393)
..+..+.+||..+++... +...+ .....+.+.|..+ + ++... ....+.+|+.+++.-...-.
T Consensus 99 s~D~~i~lWd~~~~~~~~~~~~~~--------~~~~~~~~spdg~-~--l~~g~------~dg~v~i~~~~~~~~~~~~~ 161 (321)
T 3ow8_A 99 SLDAHIRLWDLENGKQIKSIDAGP--------VDAWTLAFSPDSQ-Y--LATGT------HVGKVNIFGVESGKKEYSLD 161 (321)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCT--------TCCCCEEECTTSS-E--EEEEC------TTSEEEEEETTTCSEEEEEE
T ss_pred eCCCcEEEEECCCCCEEEEEeCCC--------ccEEEEEECCCCC-E--EEEEc------CCCcEEEEEcCCCceeEEec
Confidence 356789999998876443 32222 1112345555432 2 22221 23467888887764321100
Q ss_pred cCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEEEEE-eCCe
Q 046902 186 LPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVGS-LEGC 263 (393)
Q Consensus 186 ~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~~-~~G~ 263 (393)
.. ......-...-+|.....+.. ...|..+|+.+.+... +...... .. .+.- -+|.
T Consensus 162 ~~------------~~~v~~~~~spdg~~lasg~~---dg~i~iwd~~~~~~~~~~~~h~~~------v~-~l~~spd~~ 219 (321)
T 3ow8_A 162 TR------------GKFILSIAYSPDGKYLASGAI---DGIINIFDIATGKLLHTLEGHAMP------IR-SLTFSPDSQ 219 (321)
T ss_dssp CS------------SSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCCSSC------CC-EEEECTTSC
T ss_pred CC------------CceEEEEEECCCCCEEEEEcC---CCeEEEEECCCCcEEEEEcccCCc------ee-EEEEcCCCC
Confidence 00 000000011124444333332 3468889998765432 3321111 11 2222 2666
Q ss_pred EEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEE
Q 046902 264 LCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 339 (393)
Q Consensus 264 L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~ 339 (393)
+.+....+ ..+.||-++.. .....+.-.. ....-+++.++|..++....++.+..||+++++..
T Consensus 220 ~l~s~s~d-g~i~iwd~~~~------~~~~~~~~h~-----~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 220 LLVTASDD-GYIKIYDVQHA------NLAGTLSGHA-----SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp EEEEECTT-SCEEEEETTTC------CEEEEECCCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEcCC-CeEEEEECCCc------ceeEEEcCCC-----CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 65555443 48999987631 1233333211 12345677788887777777778999999988644
No 115
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=83.88 E-value=20 Score=30.92 Aligned_cols=190 Identities=10% Similarity=0.021 Sum_probs=93.5
Q ss_pred eEEEeeCCceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCe
Q 046902 102 LIALCNSVQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSW 180 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W 180 (393)
+|+....+..+.|||..|++... +..- ......+.+.|... .++... ....+.+|+.+++.
T Consensus 69 ~l~s~s~d~~i~vwd~~~~~~~~~~~~h--------~~~v~~~~~~~~~~--~l~sgs-------~D~~v~lWd~~~~~- 130 (304)
T 2ynn_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAH--------PDYIRSIAVHPTKP--YVLSGS-------DDLTVKLWNWENNW- 130 (304)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECC--------SSCEEEEEECSSSS--EEEEEE-------TTSCEEEEEGGGTT-
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEeCC--------CCcEEEEEEcCCCC--EEEEEC-------CCCeEEEEECCCCc-
Confidence 44444456789999999887543 2211 12234566666532 222222 23457788876541
Q ss_pred EEccccCcccccccccccccccccCceeEe---CceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCcee-E
Q 046902 181 RRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVH-V 255 (393)
Q Consensus 181 ~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~-~ 255 (393)
.....+. .+. ..-.++.. +|.+...+.. ...|..+|+.+..-.. +..... .... .
T Consensus 131 ~~~~~~~----------~h~--~~v~~v~~~p~~~~~l~sgs~---D~~v~iwd~~~~~~~~~~~~~~~-----~~v~~~ 190 (304)
T 2ynn_A 131 ALEQTFE----------GHE--HFVMCVAFNPKDPSTFASGCL---DRTVKVWSLGQSTPNFTLTTGQE-----RGVNYV 190 (304)
T ss_dssp EEEEEEC----------CCC--SCEEEEEECTTCTTEEEEEET---TSEEEEEETTCSSCSEEEECCCT-----TCEEEE
T ss_pred chhhhhc----------ccC--CcEEEEEECCCCCCEEEEEeC---CCeEEEEECCCCCccceeccCCc-----CcEEEE
Confidence 1111111 000 01112222 2333322222 3578888886543221 111110 1111 1
Q ss_pred EEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECC
Q 046902 256 DVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLE 334 (393)
Q Consensus 256 ~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~ 334 (393)
..... ++.+.+.... +..+.||-++. -..+.++.-.. ....-+.+.+++..|+-...++.+..||.+
T Consensus 191 ~~~~~~~~~~l~s~s~-D~~i~iWd~~~------~~~~~~~~~h~-----~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 191 DYYPLPDKPYMITASD-DLTIKIWDYQT------KSCVATLEGHM-----SNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp EECCSTTCCEEEEEET-TSEEEEEETTT------TEEEEEEECCS-----SCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred EEEEcCCCCEEEEEcC-CCeEEEEeCCC------CccceeeCCCC-----CCEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 11111 4555444444 44999997753 23444444211 123456777888777766777789999999
Q ss_pred CCcEEEE
Q 046902 335 TNSLRTV 341 (393)
Q Consensus 335 t~~~~~v 341 (393)
+.+....
T Consensus 259 ~~~~~~~ 265 (304)
T 2ynn_A 259 TYKVEKT 265 (304)
T ss_dssp TCCEEEE
T ss_pred CCceeee
Confidence 9876543
No 116
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=83.82 E-value=19 Score=30.46 Aligned_cols=190 Identities=11% Similarity=0.062 Sum_probs=98.1
Q ss_pred eeceEEEeeC-CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 99 CNGLIALCNS-VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 99 ~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
.+|.|...+. ...+.++++.++....+-... .....++.+|+..+. ++.... ....+.+++...
T Consensus 46 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~-------~~~p~~ia~d~~~~~--lyv~d~------~~~~I~~~~~~g 110 (267)
T 1npe_A 46 VDKVVYWTDISEPSIGRASLHGGEPTTIIRQD-------LGSPEGIALDHLGRT--IFWTDS------QLDRIEVAKMDG 110 (267)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCCEEEECTT-------CCCEEEEEEETTTTE--EEEEET------TTTEEEEEETTS
T ss_pred CCCEEEEEECCCCEEEEEecCCCCcEEEEECC-------CCCccEEEEEecCCe--EEEEEC------CCCEEEEEEcCC
Confidence 4667766653 457888888776543332211 122356778876442 222221 234677888764
Q ss_pred CCeEEccccCcccccccccccccccccCceeEe---CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCcee
Q 046902 178 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVH 254 (393)
Q Consensus 178 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~ 254 (393)
..-+.+.... . ....++.+ +|.+||.... .....|..+++.......+.. .... . .
T Consensus 111 ~~~~~~~~~~------------~--~~P~~i~vd~~~g~lyv~~~~-~~~~~I~~~~~dg~~~~~~~~-~~~~---~--P 169 (267)
T 1npe_A 111 TQRRVLFDTG------------L--VNPRGIVTDPVRGNLYWTDWN-RDNPKIETSHMDGTNRRILAQ-DNLG---L--P 169 (267)
T ss_dssp CSCEEEECSS------------C--SSEEEEEEETTTTEEEEEECC-SSSCEEEEEETTSCCCEEEEC-TTCS---C--E
T ss_pred CCEEEEEECC------------C--CCccEEEEeeCCCEEEEEECC-CCCcEEEEEecCCCCcEEEEE-CCCC---C--C
Confidence 4322221100 0 11223333 6899998532 113578899987654433321 1111 1 1
Q ss_pred EEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEE
Q 046902 255 VDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWF 331 (393)
Q Consensus 255 ~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~y 331 (393)
..++.. ++.||++..... . |++++-.+ . .....+.. ...|.++..+++.+++... ...+..+
T Consensus 170 ~gia~d~~~~~lyv~d~~~~-~--I~~~~~~g---~-~~~~~~~~--------~~~P~gi~~d~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 170 NGLTFDAFSSQLCWVDAGTH-R--AECLNPAQ---P-GRRKVLEG--------LQYPFAVTSYGKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp EEEEEETTTTEEEEEETTTT-E--EEEEETTE---E-EEEEEEEC--------CCSEEEEEEETTEEEEEETTTTEEEEE
T ss_pred cEEEEcCCCCEEEEEECCCC-E--EEEEecCC---C-ceEEEecC--------CCCceEEEEeCCEEEEEECCCCeEEEE
Confidence 233433 578888876543 4 44454322 1 11111221 1345666556677888764 3579999
Q ss_pred ECCCCcEE
Q 046902 332 DLETNSLR 339 (393)
Q Consensus 332 d~~t~~~~ 339 (393)
|+++++..
T Consensus 235 d~~~g~~~ 242 (267)
T 1npe_A 235 DLAISKEM 242 (267)
T ss_dssp ETTTTEEE
T ss_pred eCCCCCce
Confidence 99987643
No 117
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=83.61 E-value=24 Score=31.55 Aligned_cols=191 Identities=10% Similarity=0.041 Sum_probs=98.7
Q ss_pred eceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC
Q 046902 100 NGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS 179 (393)
Q Consensus 100 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~ 179 (393)
.+.|++.. ...+...++-+.+...+.... ....++.+|+..+ +|+.... ....+..++..++.
T Consensus 44 ~~~ll~~~-~~~I~~i~~~g~~~~~~~~~~--------~~~~~l~~d~~~~--~ly~~D~------~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 44 EPVLLFAN-RIDIRQVLPHRSEYTLLLNNL--------ENAIALDFHHRRE--LVFWSDV------TLDRILRANLNGSN 106 (349)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCEEEEECSC--------SCEEEEEEETTTT--EEEEEET------TTTEEEEEETTSCS
T ss_pred CceeEeec-ccceEEEeCCCCeeEEeecCC--------CceEEEEEecccc--EEEEEec------cCCceEEEecCCCC
Confidence 45555553 344667777666554432211 1256888887655 3333221 23467777776655
Q ss_pred eEEccccCcccccccccccccccccCceeE---eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEE
Q 046902 180 WRRISNLPRFLRDFYDYLYHSLFRKGYGVL---AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVD 256 (393)
Q Consensus 180 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~---~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~ 256 (393)
-+.+.... . ....++. .+|.+||.... ...|.++|+....-..+. ..... . ...
T Consensus 107 ~~~~~~~~------------~--~~p~glavd~~~g~ly~~d~~---~~~I~~~~~dG~~~~~l~-~~~l~---~--P~~ 163 (349)
T 3v64_C 107 VEEVVSTG------------L--ESPGGLAVDWVHDKLYWTDSG---TSRIEVANLDGAHRKVLL-WQSLE---K--PRA 163 (349)
T ss_dssp CEEEECSS------------C--SCCCEEEEETTTTEEEEEETT---TTEEEEEETTSCSCEEEE-CTTCS---C--EEE
T ss_pred ceEEEeCC------------C--CCccEEEEecCCCeEEEEcCC---CCeEEEEcCCCCceEEEE-eCCCC---C--cce
Confidence 44432111 0 1122333 37899999543 468999998765433332 11211 1 124
Q ss_pred EEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEEEC
Q 046902 257 VGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDL 333 (393)
Q Consensus 257 l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd~ 333 (393)
+++. +|.||+..... .-.|++.+-++. . .+ .+-.. ......-+++.++++.||+... ..++..+|+
T Consensus 164 iavdp~~g~ly~td~~~--~~~I~r~~~dG~-~--~~--~~~~~----~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 164 IALHPMEGTIYWTDWGN--TPRIEASSMDGS-G--RR--IIADT----HLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp EEEETTTTEEEEEECSS--SCEEEEEETTSC-S--CE--ESCCS----SCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEecCcCeEEEeccCC--CCEEEEEeCCCC-C--cE--EEEEC----CCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 4444 78888876543 234566654331 1 11 11111 1112334555555677877653 346888988
Q ss_pred CCCcEEEE
Q 046902 334 ETNSLRTV 341 (393)
Q Consensus 334 ~t~~~~~v 341 (393)
++...+.+
T Consensus 233 dG~~~~~~ 240 (349)
T 3v64_C 233 DGSHRKAV 240 (349)
T ss_dssp TSCSCEEE
T ss_pred CCCceEEE
Confidence 87655544
No 118
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=83.53 E-value=22 Score=30.96 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=26.1
Q ss_pred eEEEEEeCCcEEEEEEcCcEEEEEECCCCcE-EEEEE
Q 046902 308 RPLGYSRNGVKLLLEVRREKLVWFDLETNSL-RTVKI 343 (393)
Q Consensus 308 ~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~-~~v~~ 343 (393)
.-+++.++|+.|++...+..+..||+++.+. ..+..
T Consensus 298 ~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 298 YCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp CEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred cceEECCCCCEEEEecCCCeEEEEeccccceeeeeec
Confidence 3567788888888865566899999998763 34444
No 119
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=83.36 E-value=33 Score=32.90 Aligned_cols=198 Identities=12% Similarity=0.066 Sum_probs=102.5
Q ss_pred eeceEEEee-CCceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEe-
Q 046902 99 CNGLIALCN-SVQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSL- 175 (393)
Q Consensus 99 ~~GLl~~~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss- 175 (393)
-+|.++... .+..+.|+|+.|++... ++... . ..++.++|..+ | ++... ..-.+.+|+.
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-------~--~~~v~~spdg~-~-l~v~~-------~d~~V~v~D~~ 208 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-------A--VHISRMSASGR-Y-LLVIG-------RDARIDMIDLW 208 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECST-------T--EEEEEECTTSC-E-EEEEE-------TTSEEEEEETT
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCc-------c--cceEEECCCCC-E-EEEEC-------CCCeEEEEECc
Confidence 366666654 34579999999987543 33211 1 34666777543 2 22222 1257889998
Q ss_pred -CCCCeEEccccCcccccccccccccccccCceeE--e----CceEEEeccCCCCCcEEEEEECCCceee-eecCCCccc
Q 046902 176 -KTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--A----GGALHWVSPKSSTRSVIVAFDLVAEEFY-QLPLPDSVN 247 (393)
Q Consensus 176 -~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~----~G~lyw~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~ 247 (393)
.++. .+..++. . ....++. - +|..-+.+.. ....|.++|..+.+.. .++.+....
T Consensus 209 ~~t~~--~~~~i~~----------g---~~p~~va~sp~~~~dg~~l~v~~~--~~~~v~v~D~~t~~~~~~i~~~g~~~ 271 (543)
T 1nir_A 209 AKEPT--KVAEIKI----------G---IEARSVESSKFKGYEDRYTIAGAY--WPPQFAIMDGETLEPKQIVSTRGMTV 271 (543)
T ss_dssp SSSCE--EEEEEEC----------C---SEEEEEEECCSTTCTTTEEEEEEE--ESSEEEEEETTTCCEEEEEECCEECS
T ss_pred CCCCc--EEEEEec----------C---CCcceEEeCCCcCCCCCEEEEEEc--cCCeEEEEeccccccceeecccCccc
Confidence 5543 2222220 0 0111222 2 5654444332 1357889998876543 344432100
Q ss_pred cc----CCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEE
Q 046902 248 VS----YANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLE 322 (393)
Q Consensus 248 ~~----~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~ 322 (393)
.. ....-..+... +|..+++...+...+.+|-+.+.. . .++.++.... ...-+++.++|..++..
T Consensus 272 ~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~--~--l~~~~i~~~~------~~~~~~~spdg~~l~va 341 (543)
T 1nir_A 272 DTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID--N--LTVTSIGAAP------FLHDGGWDSSHRYFMTA 341 (543)
T ss_dssp SSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS--S--CEEEEEECCS------SCCCEEECTTSCEEEEE
T ss_pred CccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC--c--ceeEEeccCc------CccCceECCCCCEEEEE
Confidence 00 00011233333 355555555544467666655321 1 1233454322 23457888898877766
Q ss_pred Ec-CcEEEEEECCCCcEEEE
Q 046902 323 VR-REKLVWFDLETNSLRTV 341 (393)
Q Consensus 323 ~~-~~~l~~yd~~t~~~~~v 341 (393)
.. ++.+..+|.+++++...
T Consensus 342 ~~~~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 342 ANNSNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp EGGGTEEEEEETTTTEEEEE
T ss_pred ecCCCeEEEEECCCCeEEEe
Confidence 53 45799999999986553
No 120
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=83.36 E-value=24 Score=31.35 Aligned_cols=183 Identities=13% Similarity=0.097 Sum_probs=90.5
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
.|+....+..+.+||..+++....-... ......+.+.+..+.-.++... ....+.+|+.+++...
T Consensus 168 ~l~t~s~D~~v~lwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~g~~l~sgs-------~Dg~v~~wd~~~~~~~ 233 (354)
T 2pbi_B 168 QILTASGDGTCALWDVESGQLLQSFHGH-------GADVLCLDLAPSETGNTFVSGG-------CDKKAMVWDMRSGQCV 233 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECCCSSCCEEEEEE-------TTSCEEEEETTTCCEE
T ss_pred EEEEEeCCCcEEEEeCCCCeEEEEEcCC-------CCCeEEEEEEeCCCCCEEEEEe-------CCCeEEEEECCCCcEE
Confidence 3444445678999999888754321111 1123344455543323333322 2346889998887543
Q ss_pred EccccCcccccccccccccccccCceeEe--CceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEEEE
Q 046902 182 RISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVG 258 (393)
Q Consensus 182 ~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~ 258 (393)
.. +. .+. ..-.++.+ +|.....+.. ...|-.+|+.+..-.. +...... .... .+.
T Consensus 234 ~~--~~----------~h~--~~v~~v~~~p~~~~l~s~s~---D~~v~lwd~~~~~~~~~~~~~~~~----~~~~-~~~ 291 (354)
T 2pbi_B 234 QA--FE----------THE--SDVNSVRYYPSGDAFASGSD---DATCRLYDLRADREVAIYSKESII----FGAS-SVD 291 (354)
T ss_dssp EE--EC----------CCS--SCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCTTCC----SCEE-EEE
T ss_pred EE--ec----------CCC--CCeEEEEEeCCCCEEEEEeC---CCeEEEEECCCCcEEEEEcCCCcc----ccee-EEE
Confidence 21 11 000 01112222 3444333332 3568889988764332 2221111 0111 222
Q ss_pred -EeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEE
Q 046902 259 -SLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFD 332 (393)
Q Consensus 259 -~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 332 (393)
..+|.+.++...+. .+.||-+... ..+..+.-.. ....-+++.++|..|+-...++.+..||
T Consensus 292 ~s~~g~~l~~g~~d~-~i~vwd~~~~------~~~~~l~~h~-----~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 292 FSLSGRLLFAGYNDY-TINVWDVLKG------SRVSILFGHE-----NRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECTTSSEEEEEETTS-CEEEEETTTC------SEEEEECCCS-----SCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EeCCCCEEEEEECCC-cEEEEECCCC------ceEEEEECCC-----CcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 23677766666544 8999977531 1233332111 1244567788888777766666677664
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=83.28 E-value=26 Score=31.73 Aligned_cols=188 Identities=13% Similarity=0.002 Sum_probs=93.5
Q ss_pred eEEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCC-CCccEEEEEEeCCCC
Q 046902 102 LIALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGND-GDDVEVEVYSLKTNS 179 (393)
Q Consensus 102 Ll~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~-~~~~~~~Vyss~t~~ 179 (393)
.+++.. .+..+.+||+.+++....-... ....++.++|..+ + ++......... .....+.+|+..++.
T Consensus 225 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~g~-~-l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 225 LVYCSNWISEDISVIDRKTKLEIRKTDKI--------GLPRGLLLSKDGK-E-LYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECCCC--------SEEEEEEECTTSS-E-EEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred EEEEEecCCCcEEEEECCCCcEEEEecCC--------CCceEEEEcCCCC-E-EEEEECCCCccccCCCeEEEEECCCCc
Confidence 443443 3567999999888765432222 1245566776543 2 22222111100 023478899988774
Q ss_pred eEEccccCcccccccccccccccccCceeEeCc-eEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEEE
Q 046902 180 WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGG-ALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDV 257 (393)
Q Consensus 180 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G-~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l 257 (393)
-......+ . ....-...-+| .+|..... ...|..+|+.+.+... ++..... ..+
T Consensus 295 ~~~~~~~~------------~-~~~~~~~~~~g~~l~~~~~~---~~~v~v~d~~~~~~~~~~~~~~~~--------~~~ 350 (433)
T 3bws_A 295 LIDTIGPP------------G-NKRHIVSGNTENKIYVSDMC---CSKIEVYDLKEKKVQKSIPVFDKP--------NTI 350 (433)
T ss_dssp EEEEEEEE------------E-CEEEEEECSSTTEEEEEETT---TTEEEEEETTTTEEEEEEECSSSE--------EEE
T ss_pred EEeeccCC------------C-CcceEEECCCCCEEEEEecC---CCEEEEEECCCCcEEEEecCCCCC--------CeE
Confidence 33221111 0 00011112245 45554332 3689999998765433 3322111 133
Q ss_pred EEe-CCe-EEEEEEcC-------------CCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEE
Q 046902 258 GSL-EGC-LCVFRFYN-------------LVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLE 322 (393)
Q Consensus 258 ~~~-~G~-L~~~~~~~-------------~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~ 322 (393)
... +|+ |++..... +..+.+|-++. .+.+..+.... ...-+++.++|..++..
T Consensus 351 ~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~------~~~~~~~~~~~------~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 351 ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT------DTVKEFWEAGN------QPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT------TEEEEEEECSS------SEEEEEECTTSCEEEEE
T ss_pred EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC------CcEEEEecCCC------CCceEEEcCCCCEEEEE
Confidence 333 565 44443321 12677775542 33444444321 23456777888877776
Q ss_pred Ec-CcEEEEEECCC
Q 046902 323 VR-REKLVWFDLET 335 (393)
Q Consensus 323 ~~-~~~l~~yd~~t 335 (393)
.. +..+..||+++
T Consensus 419 ~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 419 DFLDHQIRVYRRDG 432 (433)
T ss_dssp ETTTTEEEEEEETT
T ss_pred ECCCCeEEEEEecC
Confidence 54 56788888763
No 122
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=83.26 E-value=21 Score=30.66 Aligned_cols=67 Identities=7% Similarity=0.120 Sum_probs=40.0
Q ss_pred CeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCC---cEEEEEEcCcEEEEEECCCC
Q 046902 262 GCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNG---VKLLLEVRREKLVWFDLETN 336 (393)
Q Consensus 262 G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g---~~i~l~~~~~~l~~yd~~t~ 336 (393)
+++.+.+..+ ..+.||-++.. ...|.....+.-.. ....-+.+.+++ ..+.-...++.+..||+++.
T Consensus 170 ~~~l~sgs~D-~~v~lwd~~~~--~~~~~~~~~l~~H~-----~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 170 SRKFVTGGAD-NLVKIWKYNSD--AQTYVLESTLEGHS-----DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp CCEEEEEETT-SCEEEEEEETT--TTEEEEEEEECCCS-----SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cceEEEEcCC-CcEEEEEEcCC--CceEEEEEEecCCC-----CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 4454544444 48999998752 24576666554311 124456677764 44444555667999998874
No 123
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=83.11 E-value=27 Score=31.77 Aligned_cols=64 Identities=14% Similarity=0.192 Sum_probs=40.0
Q ss_pred CeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCc
Q 046902 262 GCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNS 337 (393)
Q Consensus 262 G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~ 337 (393)
|.+.+.+..+. .+.||-+.. -..+..+.-.. ....-+.+.++|..|+-...++.+..||.++++
T Consensus 308 g~~l~sgs~D~-~i~iwd~~~------~~~~~~~~~h~-----~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 308 GPFLLSGSRDK-TIKMWDVST------GMCLMTLVGHD-----NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp CCEEEEEETTS-EEEEEETTT------TEEEEEEECCS-----SCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred CCEEEEEeCCC-eEEEEECCC------CceEEEEECCC-----CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 55555555444 899998763 12333333211 123456777888877777777789999998875
No 124
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=82.81 E-value=13 Score=37.08 Aligned_cols=128 Identities=13% Similarity=0.046 Sum_probs=62.9
Q ss_pred CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE--eCCeEEEEEEcCCCeEEEEEEeecCCCCC
Q 046902 211 GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS--LEGCLCVFRFYNLVYVDMWMMKEHAVKES 288 (393)
Q Consensus 211 ~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~--~~G~L~~~~~~~~~~~~iW~l~~~~~~~~ 288 (393)
+|.|||.... ....|.++++....-..+... ... .. ..|+. .+|+||++..... . |++++-.+. .
T Consensus 507 ~g~ly~td~~--~~~~I~~~~~dG~~~~~l~~~-~l~---~P--nGlavd~~~~~LY~aD~~~~-~--I~~~d~dG~-~- 573 (699)
T 1n7d_A 507 HGFMYWTDWG--TPAKIKKGGLNGVDIYSLVTE-NIQ---WP--NGITLDLLSGRLYWVDSKLH-S--ISSIDVNGG-N- 573 (699)
T ss_dssp SSCCEECCCS--SSCCEEBCCSSSCCCCEESCS-SCS---SC--CCEEECTTTCCEEEEETTTT-E--EEEECSSSS-C-
T ss_pred CCcEEEcccC--CCCeEEEEeCCCCCeeEEEeC-CCC---Cc--cEEEEeccCCEEEEEecCCC-e--EEEEccCCC-c-
Confidence 6899998532 125788888765433322110 110 00 12333 3688888875433 3 445543231 1
Q ss_pred eEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEEECCCCcEEEEEEecCCCC-eeeeEEEEecc
Q 046902 289 WTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTVKIDTHGLD-FVDTEICMASL 360 (393)
Q Consensus 289 W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd~~t~~~~~v~~~~~~~~-~~~~~~y~~SL 360 (393)
-..+ +.... ....|.++..+++.||+... ...|..+|..+++...+-. .+.. -..+.+|.+..
T Consensus 574 ~~~~--~~~~~-----~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~--~~~~~P~~i~v~~~~~ 638 (699)
T 1n7d_A 574 RKTI--LEDEK-----RLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA--ENLLSPEDMVLFHQLT 638 (699)
T ss_dssp CEEE--CCCSS-----SCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC--TTCSSCCCCCBCSSSS
T ss_pred eEEE--EecCC-----cCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee--cCCCCCcEEEEeCccc
Confidence 1111 11100 12335555445567777643 3579999998876554311 2222 33444555544
No 125
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=82.73 E-value=29 Score=31.78 Aligned_cols=212 Identities=13% Similarity=0.040 Sum_probs=108.4
Q ss_pred eeceEEEeeC-CceEEEEeccccc----eeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEE
Q 046902 99 CNGLIALCNS-VQELALFNPSTRK----LKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVY 173 (393)
Q Consensus 99 ~~GLl~~~~~-~~~~~V~NP~T~~----~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vy 173 (393)
.+|.|...+. ...++..++-.+. ...+.... .....++.+|...+. |..... ....++++
T Consensus 122 ~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~-------~~~p~glavD~~~~~--lY~~d~------~~~~I~~~ 186 (400)
T 3p5b_L 122 ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-------IQAPDGLAVDWIHSN--IYWTDS------VLGTVSVA 186 (400)
T ss_dssp TTTEEEEEETTTTEEEEEEC------CCCEEEECSS-------CSCEEEEEEETTTTE--EEEEET------TTTEEEEE
T ss_pred ccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC-------CCCcccEEEEecCCc--eEEEEC------CCCeEEEE
Confidence 4677776653 3467777775421 22221111 123457888875543 333221 23467788
Q ss_pred EeCCCCeEEccccCcccccccccccccccccCceeEe---CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccC
Q 046902 174 SLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSY 250 (393)
Q Consensus 174 ss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~ 250 (393)
+.....-+.+.... . ....++.+ +|.|||.... ....|..+|+....-..+.. ....
T Consensus 187 ~~~g~~~~~l~~~~------------~--~~P~~iavdp~~g~ly~td~~--~~~~I~~~~~dG~~~~~~~~-~~l~--- 246 (400)
T 3p5b_L 187 DTKGVKRKTLFREN------------G--SKPRAIVVDPVHGFMYWTDWG--TPAKIKKGGLNGVDIYSLVT-ENIQ--- 246 (400)
T ss_dssp CTTTCSEEEEEECS------------S--CCEEEEEEETTTTEEEEEECS--SSCCEEEEETTSCSCEEEEC-SSCS---
T ss_pred eCCCCceEEEEeCC------------C--CCcceEEEecccCeEEEEeCC--CCCEEEEEeCCCCccEEEEE-CCCC---
Confidence 77665544332111 0 11223443 6899998543 12579999987544333211 1111
Q ss_pred CceeEEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcE
Q 046902 251 ANVHVDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REK 327 (393)
Q Consensus 251 ~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~ 327 (393)
. ...|+.. +|+||++..... .||+.+-.+ ....+.. .... ....|.++.-+++.||+... ...
T Consensus 247 ~--P~glavd~~~~~lY~aD~~~~---~I~~~d~dG-~~~~~~~---~~~~-----~l~~P~gl~v~~~~lywtd~~~~~ 312 (400)
T 3p5b_L 247 W--PNGITLDLLSGRLYWVDSKLH---SISSIDVNG-GNRKTIL---EDEK-----RLAHPFSLAVFEDKVFWTDIINEA 312 (400)
T ss_dssp C--EEEEEEETTTTEEEEEETTTT---EEEEEETTS-CCCEEEE---ECSS-----TTSSEEEEEEETTEEEEEESSSCS
T ss_pred c--eEEEEEEeCCCEEEEEECCCC---EEEEEeCCC-CccEEEE---eCCC-----CCCCCEEEEEeCCEEEEecCCCCe
Confidence 1 1234444 788999875433 466666433 2222221 1111 12456666656677887653 346
Q ss_pred EEEEECCCCc-EEEEEEecCCCC-eeeeEEEEecccc
Q 046902 328 LVWFDLETNS-LRTVKIDTHGLD-FVDTEICMASLVP 362 (393)
Q Consensus 328 l~~yd~~t~~-~~~v~~~~~~~~-~~~~~~y~~SL~~ 362 (393)
+..+|..+++ .+.|. .+.. -+.+.+|.+..-+
T Consensus 313 V~~~~~~~G~~~~~i~---~~~~~p~~i~v~~~~~qp 346 (400)
T 3p5b_L 313 IFSANRLTGSDVNLLA---ENLLSPEDMVLFHNLTQP 346 (400)
T ss_dssp EEEEESSSCCCCEEEE---CSCSCEEEEEEESGGGSC
T ss_pred EEEEEcCCCCceEEEe---cCCCCCceEEEEeeccCC
Confidence 9999966654 44442 3443 5667778777654
No 126
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=82.72 E-value=38 Score=33.23 Aligned_cols=153 Identities=10% Similarity=0.089 Sum_probs=75.9
Q ss_pred ccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEeCce-EEEeccC-CCCCcEEEEEECCCc-eeeeecCC
Q 046902 167 DVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGA-LHWVSPK-SSTRSVIVAFDLVAE-EFYQLPLP 243 (393)
Q Consensus 167 ~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~-lyw~~~~-~~~~~~il~fD~~~e-~~~~i~lP 243 (393)
...+.+++..++.-+.+..... ...........-+|. ++..... ......|..+|+.+. ....+...
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~ 303 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEP----------KEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE 303 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSC----------TTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred eeEEEEEECCCCceEeeccCCC----------CceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc
Confidence 4578888888876554432110 000001111123554 4443322 122357999999887 65554211
Q ss_pred CcccccCCc-eeEEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEE
Q 046902 244 DSVNVSYAN-VHVDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLL 320 (393)
Q Consensus 244 ~~~~~~~~~-~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~ 320 (393)
..... ... ..+. ..- +|++.++.. ......||.++..+ . ....+... .......+++.++|+.|+
T Consensus 304 ~~~~~-~~~~~~~~-~sp~~dg~~l~~~~-~~g~~~l~~~~~~~--~---~~~~l~~~----~~~v~~~~~~spdg~~l~ 371 (706)
T 2z3z_A 304 TDKHY-VEPLHPLT-FLPGSNNQFIWQSR-RDGWNHLYLYDTTG--R---LIRQVTKG----EWEVTNFAGFDPKGTRLY 371 (706)
T ss_dssp ECSSC-CCCCSCCE-ECTTCSSEEEEEEC-TTSSCEEEEEETTS--C---EEEECCCS----SSCEEEEEEECTTSSEEE
T ss_pred cCCCe-ECccCCce-eecCCCCEEEEEEc-cCCccEEEEEECCC--C---EEEecCCC----CeEEEeeeEEcCCCCEEE
Confidence 11000 000 0111 122 777544443 33478899988322 2 22233221 111233467788888887
Q ss_pred EEEcC-----cEEEEEECCCCcEEEE
Q 046902 321 LEVRR-----EKLVWFDLETNSLRTV 341 (393)
Q Consensus 321 l~~~~-----~~l~~yd~~t~~~~~v 341 (393)
+.... ..++.+|+++++.+.+
T Consensus 372 ~~~~~~~~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 372 FESTEASPLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp EEESSSCTTCBEEEEEETTCCCCEES
T ss_pred EEecCCCCceEEEEEEEcCCCCceec
Confidence 76543 2699999998876554
No 127
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=82.63 E-value=30 Score=31.87 Aligned_cols=66 Identities=9% Similarity=-0.063 Sum_probs=40.9
Q ss_pred CeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEE
Q 046902 262 GCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 339 (393)
Q Consensus 262 G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~ 339 (393)
|.+.+.+..+ ..+.||-+... .-. ..+.... .....-+.+. +|..++....+..+..||+++++..
T Consensus 210 ~~~l~s~~~d-~~i~vwd~~~~----~~~--~~~~~~h----~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 210 HQFIITSDRD-EHIKISHYPQC----FIV--DKWLFGH----KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEETT-SCEEEEEESCT----TCE--EEECCCC----SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEE
T ss_pred CcEEEEEcCC-CcEEEEECCCC----cee--eeeecCC----CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEe
Confidence 6666666554 48999998742 111 1111111 1123456677 8888887777778999999998743
No 128
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=82.36 E-value=42 Score=33.45 Aligned_cols=187 Identities=9% Similarity=0.051 Sum_probs=93.5
Q ss_pred eEEEeeCCceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCe
Q 046902 102 LIALCNSVQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSW 180 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W 180 (393)
+|.....+..+.|||..+++... +.... ....++.+.|..+ + ++... ....+.||+..++..
T Consensus 27 ~la~~~~~g~v~iwd~~~~~~~~~~~~~~--------~~v~~~~~s~~~~-~-l~~~~-------~dg~i~vw~~~~~~~ 89 (814)
T 3mkq_A 27 WVLTTLYSGRVEIWNYETQVEVRSIQVTE--------TPVRAGKFIARKN-W-IIVGS-------DDFRIRVFNYNTGEK 89 (814)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCS--------SCEEEEEEEGGGT-E-EEEEE-------TTSEEEEEETTTCCE
T ss_pred EEEEEeCCCEEEEEECCCCceEEEEecCC--------CcEEEEEEeCCCC-E-EEEEe-------CCCeEEEEECCCCcE
Confidence 33333456678999988876443 32211 2244566666432 2 22222 245789999988765
Q ss_pred EEc-cccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCc-eeee-ecCCCcccccCCceeEEE
Q 046902 181 RRI-SNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAE-EFYQ-LPLPDSVNVSYANVHVDV 257 (393)
Q Consensus 181 ~~~-~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e-~~~~-i~lP~~~~~~~~~~~~~l 257 (393)
... ..-. .....-...-+|..-..+.. ...|..+|+.+. .... +.... .. -..+
T Consensus 90 ~~~~~~~~-------------~~v~~~~~s~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~~~~~~------~~-v~~~ 146 (814)
T 3mkq_A 90 VVDFEAHP-------------DYIRSIAVHPTKPYVLSGSD---DLTVKLWNWENNWALEQTFEGHE------HF-VMCV 146 (814)
T ss_dssp EEEEECCS-------------SCEEEEEECSSSSEEEEEET---TSEEEEEEGGGTSEEEEEEECCS------SC-EEEE
T ss_pred EEEEecCC-------------CCEEEEEEeCCCCEEEEEcC---CCEEEEEECCCCceEEEEEcCCC------Cc-EEEE
Confidence 332 1111 00000011123433222222 357888998765 3222 22111 11 1133
Q ss_pred EEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEe--CCcEEEEEEcCcEEEEEEC
Q 046902 258 GSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSR--NGVKLLLEVRREKLVWFDL 333 (393)
Q Consensus 258 ~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~--~g~~i~l~~~~~~l~~yd~ 333 (393)
.-. +|.+.++...+. .+.+|-+.... ..+.. ..... ....-+.+.+ +|..++....++.+..||+
T Consensus 147 ~~~p~~~~~l~~~~~dg-~v~vwd~~~~~--~~~~~----~~~~~----~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~ 215 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDR-TVKVWSLGQST--PNFTL----TTGQE----RGVNYVDYYPLPDKPYMITASDDLTIKIWDY 215 (814)
T ss_dssp EEETTEEEEEEEEETTS-EEEEEETTCSS--CSEEE----ECCCT----TCCCEEEECCSTTCCEEEEECTTSEEEEEET
T ss_pred EEEcCCCCEEEEEeCCC-eEEEEECCCCc--ceeEE----ecCCC----CCEEEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 333 455555555444 89999876421 22222 11110 1233456665 7777777777778999999
Q ss_pred CCCcEE
Q 046902 334 ETNSLR 339 (393)
Q Consensus 334 ~t~~~~ 339 (393)
.+++..
T Consensus 216 ~~~~~~ 221 (814)
T 3mkq_A 216 QTKSCV 221 (814)
T ss_dssp TTTEEE
T ss_pred CCCcEE
Confidence 887643
No 129
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=82.34 E-value=30 Score=31.73 Aligned_cols=204 Identities=13% Similarity=0.033 Sum_probs=101.1
Q ss_pred EeeeeeceEEEeeC-CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEE
Q 046902 95 VLGSCNGLIALCNS-VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVY 173 (393)
Q Consensus 95 ~~~s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vy 173 (393)
+.-..+|-|++.+. ...+.+++|.+++...+.... . .. . +.+++..+ .++.... .....+.++
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~---~---~~--~-ia~~~~g~--~l~~~d~-----~~~~~I~~~ 199 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF---K---GG--K-PAVTKDKQ--RVYSIGW-----EGTHTVYVY 199 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC---C---BC--B-CEECTTSS--EEEEEBS-----STTCEEEEE
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC---C---CC--c-eeEecCCC--cEEEEec-----CCCceEEEE
Confidence 33345676666653 468999999998877664332 1 11 1 44565543 2222211 011267777
Q ss_pred EeCCCC-eEEccccCcccccccccccccccccCceeE--e-CceEEEeccCCCCCcEEEEEECCCceeeeec---CCCcc
Q 046902 174 SLKTNS-WRRISNLPRFLRDFYDYLYHSLFRKGYGVL--A-GGALHWVSPKSSTRSVIVAFDLVAEEFYQLP---LPDSV 246 (393)
Q Consensus 174 ss~t~~-W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~-~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~---lP~~~ 246 (393)
+..++. .+.+..... ... ....++. - +|.+|+... ...|..+|+.+.....+. .....
T Consensus 200 d~~~~~~~~~~g~~~~---------~~~--~~p~~iav~p~~g~lyv~d~----~~~I~~~d~~~~~~~~~~~~~~~g~~ 264 (409)
T 3hrp_A 200 MKASGWAPTRIGQLGS---------TFS--GKIGAVALDETEEWLYFVDS----NKNFGRFNVKTQEVTLIKQLELSGSL 264 (409)
T ss_dssp EGGGTTCEEEEEECCT---------TSC--SCCCBCEECTTSSEEEEECT----TCEEEEEETTTCCEEEEEECCCCSCC
T ss_pred EcCCCceeEEeeeccc---------hhc--CCcEEEEEeCCCCeEEEEEC----CCcEEEEECCCCCEEEEecccccCCC
Confidence 765432 233311110 000 1112222 2 689999422 357999999877655551 11111
Q ss_pred cccCCceeEEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCC---CCC------CCcceeeEEEEEeC
Q 046902 247 NVSYANVHVDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEP---TPT------RSFLFLRPLGYSRN 315 (393)
Q Consensus 247 ~~~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~---~~~------~~~~~~~~~~~~~~ 315 (393)
. ...+ ..++.. +|.|++...... . |++++..+ .-... .... ... ..+....-+++.++
T Consensus 265 ~--~~P~-~~ia~~p~~g~lyv~d~~~~-~--I~~~~~~g---~~~~~--~g~~~~~g~~dg~~~~~~~~~P~gia~d~d 333 (409)
T 3hrp_A 265 G--TNPG-PYLIYYFVDSNFYMSDQNLS-S--VYKITPDG---ECEWF--CGSATQKTVQDGLREEALFAQPNGMTVDED 333 (409)
T ss_dssp C--CSSC-CEEEEETTTTEEEEEETTTT-E--EEEECTTC---CEEEE--EECTTCCSCBCEEGGGCBCSSEEEEEECTT
T ss_pred C--CCcc-ccEEEeCCCCEEEEEeCCCC-E--EEEEecCC---CEEEE--EeCCCCCCcCCCcccccEeCCCeEEEEeCC
Confidence 1 1111 034443 688888765433 4 44454322 11111 1111 000 00112333556677
Q ss_pred CcEEEEEE--cCcEEEEEECCCCcEEEE
Q 046902 316 GVKLLLEV--RREKLVWFDLETNSLRTV 341 (393)
Q Consensus 316 g~~i~l~~--~~~~l~~yd~~t~~~~~v 341 (393)
|. |++.. ...++..+|+.++++..+
T Consensus 334 G~-lyvad~~~~~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 334 GN-FYIVDGFKGYCLRKLDILDGYVSTV 360 (409)
T ss_dssp CC-EEEEETTTTCEEEEEETTTTEEEEE
T ss_pred CC-EEEEeCCCCCEEEEEECCCCEEEEE
Confidence 77 66654 456899999888887766
No 130
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=81.81 E-value=37 Score=32.46 Aligned_cols=189 Identities=14% Similarity=0.106 Sum_probs=97.2
Q ss_pred eceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC
Q 046902 100 NGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS 179 (393)
Q Consensus 100 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~ 179 (393)
+++++.........+||..|++.+.|...+ . ..+.++|.. .+ ++....... ....+.+++..++.
T Consensus 122 ~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-------~---~~~~~spDG-~~-la~~~~~~~---~~~~i~~~d~~~g~ 186 (582)
T 3o4h_A 122 EAVVFTGATEDRVALYALDGGGLRELARLP-------G---FGFVSDIRG-DL-IAGLGFFGG---GRVSLFTSNLSSGG 186 (582)
T ss_dssp SCEEEEEECSSCEEEEEEETTEEEEEEEES-------S---CEEEEEEET-TE-EEEEEEEET---TEEEEEEEETTTCC
T ss_pred CeEEEEecCCCCceEEEccCCcEEEeecCC-------C---ceEEECCCC-CE-EEEEEEcCC---CCeEEEEEcCCCCC
Confidence 446666655556679999999888776544 1 234455543 23 222222111 22458888988998
Q ss_pred eEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeE-EE-
Q 046902 180 WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHV-DV- 257 (393)
Q Consensus 180 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~-~l- 257 (393)
++.+..-+. . .......-+|...+... ......|..+|+.+.+...+.-............. ..
T Consensus 187 ~~~l~~~~~----------~---~~~~~~SpDG~~l~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3o4h_A 187 LRVFDSGEG----------S---FSSASISPGMKVTAGLE-TAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLG 252 (582)
T ss_dssp CEEECCSSC----------E---EEEEEECTTSCEEEEEE-CSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEE
T ss_pred ceEeecCCC----------c---cccceECCCCCEEEEcc-CCCeeEEEEEcCCCCcEEEccCCCcChhhhhhcccccee
Confidence 887753221 0 11112223665544332 22234799999998877632222111000000000 01
Q ss_pred EEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC---cEEEEEECC
Q 046902 258 GSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR---EKLVWFDLE 334 (393)
Q Consensus 258 ~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~---~~l~~yd~~ 334 (393)
..-+|.+++....+. .+.||.+ +. ... .+. ....-+.+. +|..++..... ..++.+|.+
T Consensus 253 ~spdg~~~~~~~~~g-~~~l~~~---g~---~~~----~~~------~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 253 YLPDGRLAVVARREG-RSAVFID---GE---RVE----APQ------GNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp ECTTSCEEEEEEETT-EEEEEET---TE---EEC----CCS------SEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred EcCCCcEEEEEEcCC-cEEEEEE---CC---eec----cCC------CceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 223777766665544 8999988 31 111 111 123345666 76655544433 258888877
Q ss_pred C
Q 046902 335 T 335 (393)
Q Consensus 335 t 335 (393)
+
T Consensus 315 ~ 315 (582)
T 3o4h_A 315 E 315 (582)
T ss_dssp C
T ss_pred C
Confidence 5
No 131
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=81.37 E-value=20 Score=32.99 Aligned_cols=114 Identities=4% Similarity=0.038 Sum_probs=63.2
Q ss_pred eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCe
Q 046902 210 AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESW 289 (393)
Q Consensus 210 ~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W 289 (393)
-+|.+||.... ...|..+|+.+.....+..... .. .+.+...++.|++...... ..||+++..+ .|
T Consensus 140 ~~g~lyv~d~~---~~~I~~id~~~g~~~~~~~~~~-----~~-~ia~~~~g~~l~~~d~~~~--~~I~~~d~~~---~~ 205 (409)
T 3hrp_A 140 GNNTVLAYQRD---DPRVRLISVDDNKVTTVHPGFK-----GG-KPAVTKDKQRVYSIGWEGT--HTVYVYMKAS---GW 205 (409)
T ss_dssp STTEEEEEETT---TTEEEEEETTTTEEEEEEETCC-----BC-BCEECTTSSEEEEEBSSTT--CEEEEEEGGG---TT
T ss_pred CCCCEEEEecC---CCcEEEEECCCCEEEEeeccCC-----CC-ceeEecCCCcEEEEecCCC--ceEEEEEcCC---Cc
Confidence 46899998543 4689999999877766532211 11 1222222334454443322 2677777532 34
Q ss_pred E--EEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEEE
Q 046902 290 T--KLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 290 ~--~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v 341 (393)
. ....+.... .....-+++.++++.||+......++.||++++....+
T Consensus 206 ~~~~~g~~~~~~----~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 206 APTRIGQLGSTF----SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEEEEEECCTTS----CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEEeeeccchh----cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 3 221111101 11233467777445677765556799999999886655
No 132
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=80.58 E-value=29 Score=30.46 Aligned_cols=183 Identities=12% Similarity=0.113 Sum_probs=91.0
Q ss_pred eceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC
Q 046902 100 NGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS 179 (393)
Q Consensus 100 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~ 179 (393)
+|.++....+..+.|||..+++....-... ......+.+.|... .++. .. ....+.+|+.+++.
T Consensus 154 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~--~l~s-g~------~d~~v~~wd~~~~~ 217 (340)
T 1got_B 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGH-------TGDVMSLSLAPDTR--LFVS-GA------CDASAKLWDVREGM 217 (340)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEECTTSS--EEEE-EE------TTSCEEEEETTTCS
T ss_pred CCcEEEEECCCcEEEEECCCCcEEEEEcCC-------CCceEEEEECCCCC--EEEE-Ee------CCCcEEEEECCCCe
Confidence 445444445677999999888754322111 12244566666432 2222 21 23468888887764
Q ss_pred eEEccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEE
Q 046902 180 WRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVD 256 (393)
Q Consensus 180 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~ 256 (393)
-... +. .+. ..-.++. -+|.....+.. ...|..+|+.+.+-.. +..+... ... ..
T Consensus 218 ~~~~--~~----------~h~--~~v~~v~~~p~~~~l~s~s~---d~~v~iwd~~~~~~~~~~~~~~~~----~~v-~~ 275 (340)
T 1got_B 218 CRQT--FT----------GHE--SDINAICFFPNGNAFATGSD---DATCRLFDLRADQELMTYSHDNII----CGI-TS 275 (340)
T ss_dssp EEEE--EC----------CCS--SCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCTTCC----SCE-EE
T ss_pred eEEE--Ec----------CCc--CCEEEEEEcCCCCEEEEEcC---CCcEEEEECCCCcEEEEEccCCcc----cce-EE
Confidence 3211 11 000 0011122 24544443332 3568899988755322 3322211 111 12
Q ss_pred EEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEE
Q 046902 257 VGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFD 332 (393)
Q Consensus 257 l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 332 (393)
+.- -+|.+.+++..+. .+.||-+.. ......+.-.. ....-+++.++|..|+-...++.+..||
T Consensus 276 ~~~s~~g~~l~~g~~d~-~i~vwd~~~------~~~~~~~~~h~-----~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 276 VSFSKSGRLLLAGYDDF-NCNVWDALK------ADRAGVLAGHD-----NRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECTTSSEEEEEETTS-EEEEEETTT------CCEEEEEECCS-----SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEECCCCCEEEEECCCC-eEEEEEccc------CcEeeEeecCC-----CcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 222 3677766666544 899997653 22333333211 1234466777877666666666677665
No 133
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=80.10 E-value=51 Score=32.94 Aligned_cols=141 Identities=11% Similarity=0.126 Sum_probs=72.3
Q ss_pred ccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEe--C--ceEEEeccCCCCCcEEEEEECCCceeeeecC
Q 046902 167 DVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--G--GALHWVSPKSSTRSVIVAFDLVAEEFYQLPL 242 (393)
Q Consensus 167 ~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~--G~lyw~~~~~~~~~~il~fD~~~e~~~~i~l 242 (393)
...+.||+..++.++.+..+. .+. ..-.++.. + |.....+.. ...|..+|+.+..+..+..
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~----------~h~--~~V~~l~~s~~~~~~~l~s~s~---Dg~I~vwd~~~~~~~~~~~ 94 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLT----------GHE--GPVWRVDWAHPKFGTILASCSY---DGKVLIWKEENGRWSQIAV 94 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEEC----------CCS--SCEEEEEECCTTSCSEEEEEET---TSCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEecCCCCCccceecc----------CCc--CceEEEEecCCCCCCEEEEEeC---CCeEEEEECCCCccccccc
Confidence 457889998887777654333 110 11112322 1 444333332 3568899998887655422
Q ss_pred CCcccccCCceeEEEEEe-C--CeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEe-----
Q 046902 243 PDSVNVSYANVHVDVGSL-E--GCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSR----- 314 (393)
Q Consensus 243 P~~~~~~~~~~~~~l~~~-~--G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~----- 314 (393)
..... .. -..+... + |.+.+++..+. .+.||-+........ ..+.... ....-+.+.+
T Consensus 95 ~~~h~---~~-V~~v~~sp~~~~~~l~sgs~dg-~I~vwdl~~~~~~~~----~~~~~~~-----~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 95 HAVHS---AS-VNSVQWAPHEYGPLLLVASSDG-KVSVVEFKENGTTSP----IIIDAHA-----IGVNSASWAPATIEE 160 (753)
T ss_dssp ECCCS---SC-EEEEEECCGGGCSEEEEEETTS-EEEEEECCSSSCCCC----EEEECCS-----SCEEEEEECCCC---
T ss_pred ccCCC---CC-eEEEEECCCCCCCEEEEEeCCC-cEEEEEeecCCCcce----eEeecCC-----CceEEEEecCccccc
Confidence 11111 11 1123322 3 66666666544 999999875321111 1111100 0122333443
Q ss_pred --------CCcEEEEEEcCcEEEEEECCCC
Q 046902 315 --------NGVKLLLEVRREKLVWFDLETN 336 (393)
Q Consensus 315 --------~g~~i~l~~~~~~l~~yd~~t~ 336 (393)
++..++....++.+..||+.++
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~ 190 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSD 190 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETT
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCC
Confidence 4666777666677888988775
No 134
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=80.05 E-value=28 Score=29.88 Aligned_cols=72 Identities=14% Similarity=0.126 Sum_probs=42.1
Q ss_pred eEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCC-CcEEEE
Q 046902 263 CLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLET-NSLRTV 341 (393)
Q Consensus 263 ~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t-~~~~~v 341 (393)
.+.+.... +..+.||-++.. ...|.+.. +..... .....-+++.++|..|.....++.+..|+... ++|+.+
T Consensus 220 ~~las~s~-D~~v~iWd~~~~--~~~~~~~~-~~~~~~---~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~ 292 (297)
T 2pm7_B 220 SYMASVSQ-DRTCIIWTQDNE--QGPWKKTL-LKEEKF---PDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPA 292 (297)
T ss_dssp EEEEEEET-TSCEEEEEESST--TSCCEEEE-SSSSCC---SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC
T ss_pred eEEEEEEC-CCcEEEEEeCCC--CCccceee-eecccC---CCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEec
Confidence 44444444 449999998752 23465432 211111 11234567778888777777777788888763 456655
No 135
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=79.71 E-value=34 Score=30.73 Aligned_cols=199 Identities=12% Similarity=0.057 Sum_probs=101.0
Q ss_pred eEEEeeCCceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCe
Q 046902 102 LIALCNSVQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSW 180 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W 180 (393)
+|+....+..+.|||..+++... +.... +......+.+.+..+ + ++... ....+.+|+.+++.-
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~-~-l~~~~-------~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDV------HPDTIYSVDWSRDGA-L-ICTSC-------RDKRVRVIEPRKGTV 210 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTT------CCSCEEEEEECTTSS-C-EEEEE-------TTSEEEEEETTTTEE
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCC------CCCceEEEEECCCCC-E-EEEEe-------cCCcEEEEeCCCCce
Confidence 44444456789999999887543 31011 122345566776432 2 22222 245789999887643
Q ss_pred EEccccCcccccccccccccccccCcee-EeCceEEEeccCCCCCcEEEEEECCCcee--eeecCCCcccccCCceeEEE
Q 046902 181 RRISNLPRFLRDFYDYLYHSLFRKGYGV-LAGGALHWVSPKSSTRSVIVAFDLVAEEF--YQLPLPDSVNVSYANVHVDV 257 (393)
Q Consensus 181 ~~~~~~p~~~~~~~~~~~~~~~~~~~~v-~~~G~lyw~~~~~~~~~~il~fD~~~e~~--~~i~lP~~~~~~~~~~~~~l 257 (393)
...-... +........+ .-+|.+...+........|..+|+.+..- ....++... .. ..+
T Consensus 211 ~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----~v-~~~ 273 (402)
T 2aq5_A 211 VAEKDRP-----------HEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSS-----GV-LLP 273 (402)
T ss_dssp EEEEECS-----------SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCS-----SC-EEE
T ss_pred eeeeccC-----------CCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCC-----ce-eEE
Confidence 2211000 0000011111 12455544442112346899999987442 222222211 11 122
Q ss_pred E-EeCCeEEEEEEcCCCeEEEEEEeecCCCCCe-EEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCC
Q 046902 258 G-SLEGCLCVFRFYNLVYVDMWMMKEHAVKESW-TKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLET 335 (393)
Q Consensus 258 ~-~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t 335 (393)
. .-+|...++....+..+.||.++.. ..+ ..+....... ...-+++.++|..+ + ..+..+..|++.+
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~~~---~~~~~~l~~~~~~~------~v~~~~~sp~~~~~-~-s~~~~~~~~~l~~ 342 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEITSE---APFLHYLSMFSSKE------SQRGMGYMPKRGLE-V-NKCEIARFYKLHE 342 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEECSS---TTCEEEEEEECCSS------CCSEEEECCGGGSC-G-GGTEEEEEEEEET
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEecCC---CcceEeecccccCC------cccceEEecccccc-e-ecceeEEEEEcCC
Confidence 2 2356655555544459999999852 222 2222222111 23456777776533 3 2445788999999
Q ss_pred CcEEEEEE
Q 046902 336 NSLRTVKI 343 (393)
Q Consensus 336 ~~~~~v~~ 343 (393)
++.+.+.+
T Consensus 343 ~~~~~i~~ 350 (402)
T 2aq5_A 343 RKCEPIAM 350 (402)
T ss_dssp TEEEEEEE
T ss_pred CcEEEEEE
Confidence 99888855
No 136
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=79.07 E-value=29 Score=29.48 Aligned_cols=191 Identities=11% Similarity=0.027 Sum_probs=92.8
Q ss_pred eeeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 98 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 98 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
+.+++|+....+..+.|||..+++....-... ......+.+.+..+ + ++... ....+.+|+..+
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~-~-l~~~~-------~dg~i~~~~~~~ 90 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTG-------QGFLNSVCYDSEKE-L-LLFGG-------KDTMINGVPLFA 90 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEEC-------SSCEEEEEEETTTT-E-EEEEE-------TTSCEEEEETTC
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecC-------CccEEEEEECCCCC-E-EEEec-------CCCeEEEEEeee
Confidence 33445555556778999999887644432211 12344566676432 2 22222 223466666654
Q ss_pred CC-eEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEE
Q 046902 178 NS-WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVD 256 (393)
Q Consensus 178 ~~-W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~ 256 (393)
.. .+.+..+. .+ ...-..+..+|.....+.. ...|..+|... ....+..... .-....
T Consensus 91 ~~~~~~~~~~~----------~~--~~~i~~~~~~~~~l~~~~~---d~~i~~~d~~~-~~~~~~~~~~-----~v~~~~ 149 (313)
T 3odt_A 91 TSGEDPLYTLI----------GH--QGNVCSLSFQDGVVISGSW---DKTAKVWKEGS-LVYNLQAHNA-----SVWDAK 149 (313)
T ss_dssp CTTSCC-CEEC----------CC--SSCEEEEEEETTEEEEEET---TSEEEEEETTE-EEEEEECCSS-----CEEEEE
T ss_pred cCCCCcccchh----------hc--ccCEEEEEecCCEEEEEeC---CCCEEEEcCCc-EEEecccCCC-----ceeEEE
Confidence 21 11111111 00 0111233345554444333 35788888322 2222222111 111223
Q ss_pred EEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCC
Q 046902 257 VGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETN 336 (393)
Q Consensus 257 l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~ 336 (393)
....++.+.++...+. .+.+|-.. .....+.... .....-+.+.+++. ++....++.+..||+.++
T Consensus 150 ~~~~~~~~l~~~~~d~-~i~i~d~~--------~~~~~~~~~~----~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~ 215 (313)
T 3odt_A 150 VVSFSENKFLTASADK-TIKLWQND--------KVIKTFSGIH----NDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG 215 (313)
T ss_dssp EEETTTTEEEEEETTS-CEEEEETT--------EEEEEECSSC----SSCEEEEEEEETTE-EEEEETTSEEEEEETTTC
T ss_pred EccCCCCEEEEEECCC-CEEEEecC--------ceEEEEeccC----cccEEEEEEcCCCe-EEEccCCCeEEEEECCch
Confidence 3333677666665544 89999621 1222222211 11244566777765 666666778999999987
Q ss_pred cEE
Q 046902 337 SLR 339 (393)
Q Consensus 337 ~~~ 339 (393)
+..
T Consensus 216 ~~~ 218 (313)
T 3odt_A 216 DVL 218 (313)
T ss_dssp CEE
T ss_pred hhh
Confidence 644
No 137
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=78.96 E-value=39 Score=30.89 Aligned_cols=200 Identities=7% Similarity=0.051 Sum_probs=93.4
Q ss_pred eEEEeeCCceEEEEeccccce--eccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC
Q 046902 102 LIALCNSVQELALFNPSTRKL--KTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS 179 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~ 179 (393)
+|+....+..+.||+..++.. ..+.+... .. .+......+.+.|..+. .++... ....+.+|+.+++.
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~-~h~~~v~~v~~~p~~~~-~l~s~~-------~dg~i~i~d~~~~~ 265 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNI-FT-GHTAVVEDVAWHLLHES-LFGSVA-------DDQKLMIWDTRNNN 265 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEE-EC-CCSSCEEEEEECSSCTT-EEEEEE-------TTSEEEEEETTCSC
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceecccee-ec-CCCCCEeeeEEeCCCCC-EEEEEe-------CCCeEEEEECCCCC
Confidence 565555667899999887321 11111110 00 11223455667764433 222222 34578999998752
Q ss_pred -eEEccccCcccccccccccccccccCceeEeC--ce-EEEeccCCCCCcEEEEEECCCce--eeeecCCCcccccCCce
Q 046902 180 -WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAG--GA-LHWVSPKSSTRSVIVAFDLVAEE--FYQLPLPDSVNVSYANV 253 (393)
Q Consensus 180 -W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~--G~-lyw~~~~~~~~~~il~fD~~~e~--~~~i~lP~~~~~~~~~~ 253 (393)
.+.+..+. .....-..+..+ |. ++..+.. ...|..+|+.+.. ...+.... ..
T Consensus 266 ~~~~~~~~~------------~~~~~v~~i~~~p~~~~~l~tg~~---dg~v~vwd~~~~~~~~~~~~~h~------~~- 323 (430)
T 2xyi_A 266 TSKPSHTVD------------AHTAEVNCLSFNPYSEFILATGSA---DKTVALWDLRNLKLKLHSFESHK------DE- 323 (430)
T ss_dssp SSSCSEEEE------------CCSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCTTSCSEEEECCS------SC-
T ss_pred CCcceeEee------------cCCCCeEEEEeCCCCCCEEEEEeC---CCeEEEEeCCCCCCCeEEeecCC------CC-
Confidence 11111110 000011122222 33 4444332 3579999987632 22222111 11
Q ss_pred eEEEEEe-CC-eEEEEEEcCCCeEEEEEEeecCCCC--------CeEEEEEeeCCCCCCCcceeeEEEEEeCCc-EEEEE
Q 046902 254 HVDVGSL-EG-CLCVFRFYNLVYVDMWMMKEHAVKE--------SWTKLFSVQEPTPTRSFLFLRPLGYSRNGV-KLLLE 322 (393)
Q Consensus 254 ~~~l~~~-~G-~L~~~~~~~~~~~~iW~l~~~~~~~--------~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~-~i~l~ 322 (393)
-..+.-. +| .+.+.+..+. .+.||-+...+... .-..+....-. .....-+.+.+++. .++..
T Consensus 324 v~~i~~sp~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~p~~~~~l~s~ 397 (430)
T 2xyi_A 324 IFQVQWSPHNETILASSGTDR-RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH-----TAKISDFSWNPNEPWIICSV 397 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTS-CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCC-----SSCEEEEEECSSSTTEEEEE
T ss_pred EEEEEECCCCCCEEEEEeCCC-cEEEEeCCCCccccCccccccCCcceEEEcCCC-----CCCceEEEECCCCCCEEEEE
Confidence 1122222 34 4555555444 89999987532110 01122222211 11234566677776 56556
Q ss_pred EcCcEEEEEECCCCcEE
Q 046902 323 VRREKLVWFDLETNSLR 339 (393)
Q Consensus 323 ~~~~~l~~yd~~t~~~~ 339 (393)
..++.+..|++.++.+.
T Consensus 398 s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 398 SEDNIMQVWQMAENVYN 414 (430)
T ss_dssp ETTSEEEEEEECHHHHC
T ss_pred ECCCCEEEeEccccccc
Confidence 66677888988775443
No 138
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=78.94 E-value=36 Score=30.49 Aligned_cols=200 Identities=14% Similarity=0.092 Sum_probs=96.9
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC--
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS-- 179 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~-- 179 (393)
.|+....+..+.+||..+++....-... ....+......+.+.+..+.+ ++... ....+.+|+.+...
T Consensus 172 ~l~s~s~D~~i~~wd~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~-l~sgs-------~D~~v~~wd~~~~~~~ 241 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVTTGQRISIFGSE--FPSGHTADVLSLSINSLNANM-FISGS-------CDTTVRLWDLRITSRA 241 (380)
T ss_dssp CEEEECTTSCEEEECTTTCCEEEEECCC--SSSSCCSCEEEEEECSSSCCE-EEEEE-------TTSCEEEEETTTTCCC
T ss_pred EEEEECCCCcEEEEEcCCCcEEEEeecc--cCCCCccCeEEEEeecCCCCE-EEEEE-------CCCeEEEEECCCCCcc
Confidence 3444445678999999998766433222 111122334455555433332 22222 23467888876421
Q ss_pred eEEccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEE
Q 046902 180 WRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVD 256 (393)
Q Consensus 180 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~ 256 (393)
-+.+..-. ..-.++. -+|.....+.. ...|..+|+.+..-.. +.............-..
T Consensus 242 ~~~~~~h~---------------~~v~~v~~~p~~~~l~s~s~---D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 303 (380)
T 3iz6_a 242 VRTYHGHE---------------GDINSVKFFPDGQRFGTGSD---DGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTS 303 (380)
T ss_dssp CEEECCCS---------------SCCCEEEECTTSSEEEEECS---SSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSE
T ss_pred eEEECCcC---------------CCeEEEEEecCCCeEEEEcC---CCeEEEEECCCCcEEEEecccccccccccCceEE
Confidence 11111100 0111222 24444333322 3578899998765433 33222111000000112
Q ss_pred EE-EeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCC
Q 046902 257 VG-SLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLET 335 (393)
Q Consensus 257 l~-~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t 335 (393)
+. ..+|.+.+++..+. .+.||-+.. . .....+.... ........-+++.++|..|+-...++.+..||+.+
T Consensus 304 ~~~s~~g~~l~~g~~dg-~i~vwd~~~----~--~~~~~~~~~~-~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSNG-DCYVWDTLL----A--EMVLNLGTLQ-NSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp EEECSSSSEEEEECTTS-CEEEEETTT----C--CEEEEECCSC-SSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred EEECCCCCEEEEEECCC-CEEEEECCC----C--ceEEEEeccc-CCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 22 23677766665544 899997643 1 1223332100 01111244577888988777666677799999887
Q ss_pred Cc
Q 046902 336 NS 337 (393)
Q Consensus 336 ~~ 337 (393)
.+
T Consensus 376 ~~ 377 (380)
T 3iz6_a 376 HR 377 (380)
T ss_dssp SS
T ss_pred Cc
Confidence 53
No 139
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=78.92 E-value=29 Score=29.37 Aligned_cols=196 Identities=12% Similarity=0.172 Sum_probs=99.9
Q ss_pred EeeeeeceEEEeeC-CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEE
Q 046902 95 VLGSCNGLIALCNS-VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVY 173 (393)
Q Consensus 95 ~~~s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vy 173 (393)
+....+|-+.+... ...++++||. ++...++.+. . .....++.+|+... +..... ....+.+|
T Consensus 67 i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~--~----~~~~~~i~~~~~g~---l~v~~~------~~~~i~~~ 130 (300)
T 2qc5_A 67 LIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQ--P----DSGPYGITEGLNGD---IWFTQL------NGDRIGKL 130 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSS--T----TCCEEEEEECSTTC---EEEEET------TTTEEEEE
T ss_pred EEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCC--C----CCCCccceECCCCC---EEEEcc------CCCeEEEE
Confidence 33345676666553 4679999998 6665544332 0 12245666775432 222210 12356677
Q ss_pred EeCCCCeEEccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCC
Q 046902 174 SLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYA 251 (393)
Q Consensus 174 ss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 251 (393)
+.. +...... .+. .. ....++. -+|.+|+.... ...|..||. +.++..+.+|.... .
T Consensus 131 ~~~-g~~~~~~-~~~----------~~--~~~~~i~~d~~g~l~v~~~~---~~~i~~~~~-~g~~~~~~~~~~~~---~ 189 (300)
T 2qc5_A 131 TAD-GTIYEYD-LPN----------KG--SYPAFITLGSDNALWFTENQ---NNSIGRITN-TGKLEEYPLPTNAA---A 189 (300)
T ss_dssp CTT-SCEEEEE-CSS----------TT--CCEEEEEECTTSSEEEEETT---TTEEEEECT-TCCEEEEECSSTTC---C
T ss_pred CCC-CCEEEcc-CCC----------CC--CCceeEEECCCCCEEEEecC---CCeEEEECC-CCcEEEeeCCCCCC---C
Confidence 766 5554332 110 00 1112233 35787665432 357999999 66776666654321 1
Q ss_pred ceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEE
Q 046902 252 NVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLV 329 (393)
Q Consensus 252 ~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~ 329 (393)
...+... +|.|++...... .+.+ ++.. ..... ..+.. . .....-+++.++|. |++... ...+.
T Consensus 190 --~~~i~~d~~g~l~v~~~~~~-~i~~--~~~~---g~~~~-~~~~~-~----~~~~~~i~~d~~g~-l~v~~~~~~~i~ 254 (300)
T 2qc5_A 190 --PVGITSGNDGALWFVEIMGN-KIGR--ITTT---GEISE-YDIPT-P----NARPHAITAGKNSE-IWFTEWGANQIG 254 (300)
T ss_dssp --EEEEEECTTSSEEEEETTTT-EEEE--ECTT---CCEEE-EECSS-T----TCCEEEEEECSTTC-EEEEETTTTEEE
T ss_pred --cceEEECCCCCEEEEccCCC-EEEE--EcCC---CcEEE-EECCC-C----CCCceEEEECCCCC-EEEeccCCCeEE
Confidence 1234443 788887765433 4443 3321 23332 22221 1 11123345556665 666653 35799
Q ss_pred EEECCCCcEEEEEE
Q 046902 330 WFDLETNSLRTVKI 343 (393)
Q Consensus 330 ~yd~~t~~~~~v~~ 343 (393)
.||+ ++++..+.+
T Consensus 255 ~~~~-~g~~~~~~~ 267 (300)
T 2qc5_A 255 RITN-DNTIQEYQL 267 (300)
T ss_dssp EECT-TSCEEEEEC
T ss_pred EECC-CCcEEEEEC
Confidence 9999 566665544
No 140
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=78.90 E-value=31 Score=29.74 Aligned_cols=182 Identities=8% Similarity=-0.006 Sum_probs=92.9
Q ss_pred eeeceEEEeeC-CceEEEEeccccceec--cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEE
Q 046902 98 SCNGLIALCNS-VQELALFNPSTRKLKT--LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYS 174 (393)
Q Consensus 98 s~~GLl~~~~~-~~~~~V~NP~T~~~~~--LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vys 174 (393)
-.+|.|..+.. ...+.+.++.|++... ||+.. ...|+..+ .+ +|..+.. ....+.|||
T Consensus 62 ~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~---------FgeGit~~--g~--~Ly~ltw------~~~~v~V~D 122 (268)
T 3nok_A 62 FHQGHFFESTGHQGTLRQLSLESAQPVWMERLGNI---------FAEGLASD--GE--RLYQLTW------TEGLLFTWS 122 (268)
T ss_dssp EETTEEEEEETTTTEEEECCSSCSSCSEEEECTTC---------CEEEEEEC--SS--CEEEEES------SSCEEEEEE
T ss_pred EECCEEEEEcCCCCEEEEEECCCCcEEeEECCCCc---------ceeEEEEe--CC--EEEEEEc------cCCEEEEEE
Confidence 34677776653 3468899999987543 33221 22333333 33 4443321 345789999
Q ss_pred eCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCcee-eeecCCCcccccCCce
Q 046902 175 LKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEF-YQLPLPDSVNVSYANV 253 (393)
Q Consensus 175 s~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~ 253 (393)
..+.+=. ..++ +. ...-++..+|...|.+.. ...|..+|+++.+- ..|+....... .. .
T Consensus 123 ~~Tl~~~--~ti~----------~~---~eGwGLt~Dg~~L~vSdG---s~~l~~iDp~T~~v~~~I~V~~~g~~-v~-~ 182 (268)
T 3nok_A 123 GMPPQRE--RTTR----------YS---GEGWGLCYWNGKLVRSDG---GTMLTFHEPDGFALVGAVQVKLRGQP-VE-L 182 (268)
T ss_dssp TTTTEEE--EEEE----------CS---SCCCCEEEETTEEEEECS---SSEEEEECTTTCCEEEEEECEETTEE-CC-C
T ss_pred CCcCcEE--EEEe----------CC---CceeEEecCCCEEEEECC---CCEEEEEcCCCCeEEEEEEeCCCCcc-cc-c
Confidence 9886433 2222 10 122356666766666532 57899999987543 44555332110 00 1
Q ss_pred eEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCC--------CCcceeeEEEEEeCCcEEEEEEcC
Q 046902 254 HVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPT--------RSFLFLRPLGYSRNGVKLLLEVRR 325 (393)
Q Consensus 254 ~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~--------~~~~~~~~~~~~~~g~~i~l~~~~ 325 (393)
--.|...+|+|++...... . |-+.+- .+=.-+.+|++..+. .......-+++.++++.+|+..+.
T Consensus 183 lNeLe~~dG~lyanvw~s~-~--I~vIDp----~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 183 INELECANGVIYANIWHSS-D--VLEIDP----ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp EEEEEEETTEEEEEETTCS-E--EEEECT----TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred ccccEEeCCEEEEEECCCC-e--EEEEeC----CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 1134444999886553333 3 333442 122344555543111 011233456666777778877543
No 141
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=77.95 E-value=40 Score=30.55 Aligned_cols=211 Identities=9% Similarity=0.029 Sum_probs=107.7
Q ss_pred eeeceEEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeC
Q 046902 98 SCNGLIALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLK 176 (393)
Q Consensus 98 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~ 176 (393)
..+|.|...+ ....++.+++-++....+.... .. ...++.+|+..+. ++.... ....+++++..
T Consensus 125 ~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~--~~-----~p~glavd~~~g~--lY~~d~------~~~~I~~~~~d 189 (386)
T 3v65_B 125 HRRELVFWSDVTLDRILRANLNGSNVEEVVSTG--LE-----SPGGLAVDWVHDK--LYWTDS------GTSRIEVANLD 189 (386)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCCEEEEECSS--CS-----CCCCEEEETTTTE--EEEEET------TTTEEEECBTT
T ss_pred cCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC--CC-----CccEEEEEeCCCe--EEEEcC------CCCeEEEEeCC
Confidence 3567777776 3457888898877654443222 11 1135667765543 222211 23356676665
Q ss_pred CCCeEEccccCcccccccccccccccccCceeE---eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCce
Q 046902 177 TNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL---AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANV 253 (393)
Q Consensus 177 t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~---~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~ 253 (393)
...-+.+..-. . ....++. .+|.|||.... ....|..+|+....-..+.- .... .
T Consensus 190 g~~~~~l~~~~------------l--~~P~giavdp~~g~ly~td~~--~~~~I~r~~~dG~~~~~~~~-~~~~---~-- 247 (386)
T 3v65_B 190 GAHRKVLLWQS------------L--EKPRAIALHPMEGTIYWTDWG--NTPRIEASSMDGSGRRIIAD-THLF---W-- 247 (386)
T ss_dssp SCSCEEEECSS------------C--SCEEEEEEETTTTEEEEEECS--SSCEEEEEETTSCSCEEEEC-SSCS---C--
T ss_pred CCceEEeecCC------------C--CCCcEEEEEcCCCeEEEeccC--CCCEEEEEeCCCCCcEEEEE-CCCC---C--
Confidence 43322221100 0 1122333 36899998543 23689999987654333321 1111 1
Q ss_pred eEEEEE--eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEE
Q 046902 254 HVDVGS--LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVW 330 (393)
Q Consensus 254 ~~~l~~--~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ 330 (393)
...|+. .+|+||++..... .|++.+-.+. .. ..+ +.. . ...|.++.-+++.||+... ...+..
T Consensus 248 PnGlavd~~~~~lY~aD~~~~---~I~~~d~dG~-~~-~~~--~~~-~------~~~P~giav~~~~ly~td~~~~~V~~ 313 (386)
T 3v65_B 248 PNGLTIDYAGRRMYWVDAKHH---VIERANLDGS-HR-KAV--ISQ-G------LPHPFAITVFEDSLYWTDWHTKSINS 313 (386)
T ss_dssp EEEEEEEGGGTEEEEEETTTT---EEEEECTTSC-SC-EEE--ECS-S------CSSEEEEEEETTEEEEEETTTTEEEE
T ss_pred eeeEEEeCCCCEEEEEECCCC---EEEEEeCCCC-ee-EEE--EEC-C------CCCceEEEEECCEEEEeeCCCCeEEE
Confidence 123444 4889999876433 4556653331 11 111 111 1 1345555444567777653 457999
Q ss_pred EECCC-CcEEEEEEecCCCC-eeeeEEEEecccc
Q 046902 331 FDLET-NSLRTVKIDTHGLD-FVDTEICMASLVP 362 (393)
Q Consensus 331 yd~~t-~~~~~v~~~~~~~~-~~~~~~y~~SL~~ 362 (393)
+|..+ +..+.|. .+.. -..+..|.++.-+
T Consensus 314 ~~~~~G~~~~~i~---~~~~~p~gi~v~~~~~q~ 344 (386)
T 3v65_B 314 ANKFTGKNQEIIR---NKLHFPMDIHTLHPQRQP 344 (386)
T ss_dssp EETTTCCSCEEEE---CSCSCCCCEEEESGGGSC
T ss_pred EECCCCcceEEEc---cCCCCCceEEEEchhcCc
Confidence 99544 4455553 2323 4456667666544
No 142
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=77.49 E-value=51 Score=31.51 Aligned_cols=119 Identities=8% Similarity=0.052 Sum_probs=69.7
Q ss_pred CceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEEEEEeC-CeEEEEEEcCCCeEEEEEEeecCC-CC
Q 046902 211 GGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVGSLE-GCLCVFRFYNLVYVDMWMMKEHAV-KE 287 (393)
Q Consensus 211 ~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~~~~-G~L~~~~~~~~~~~~iW~l~~~~~-~~ 287 (393)
+|...+.+.. ....|.++|+.+.+... ++....... .. ...+..-+ |.+++........+.||-++..+. ..
T Consensus 334 dg~~l~va~~--~~~~v~v~D~~tg~l~~~i~~g~~ph~-g~--g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~ 408 (543)
T 1nir_A 334 SHRYFMTAAN--NSNKVAVIDSKDRRLSALVDVGKTPHP-GR--GANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQY 408 (543)
T ss_dssp TSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSBCC-TT--CEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTT
T ss_pred CCCEEEEEec--CCCeEEEEECCCCeEEEeeccCCCCCC-CC--CcccCCCCCccEEEeccCCCceEEEEEeCCCCCchh
Confidence 5664433322 23578889999887644 343211110 01 12233334 666655543445999998875221 23
Q ss_pred CeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-------CcEEEEEECCCCcEE
Q 046902 288 SWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-------REKLVWFDLETNSLR 339 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-------~~~l~~yd~~t~~~~ 339 (393)
.|..+.++..... ...-+.++++|..++.... +..+.+||.+|.+..
T Consensus 409 ~~~~v~~l~~~g~-----~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 409 AWKKVAELQGQGG-----GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp BTSEEEEEECSCS-----CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred cCeEEEEEEcCCC-----CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 4998888886321 1234677889988888651 336999999987743
No 143
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=77.20 E-value=46 Score=30.84 Aligned_cols=70 Identities=9% Similarity=0.017 Sum_probs=48.1
Q ss_pred eCCeEEEEEEcC------CCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCc-EEEEEE-cCcEEEEE
Q 046902 260 LEGCLCVFRFYN------LVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGV-KLLLEV-RREKLVWF 331 (393)
Q Consensus 260 ~~G~L~~~~~~~------~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~-~i~l~~-~~~~l~~y 331 (393)
-+++||+..... ...=.||+++- ..++.+.+|+... ...-+.+.++|. .+|... .++.|..|
T Consensus 329 dg~rlyVa~~~~~~gthk~~s~~VsVID~----~T~kvv~~I~vg~------~P~gia~spDg~~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 329 QSDRIYLLVDQRDEWKHKAASRFVVVLNA----ETGERINKIELGH------EIDSINVSQDAEPLLYALSAGTQTLHIY 398 (426)
T ss_dssp GGTEEEEEEEECCTTCTTSCEEEEEEEET----TTCCEEEEEEEEE------EECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred CCCEEEEEecccccccccCCCCEEEEEEC----CCCeEEEEEECCC------CcCeEEEccCCCEEEEEEcCCCCeEEEE
Confidence 357788876432 12457888883 4577888887632 234567788888 777776 35689999
Q ss_pred ECCCCcEE
Q 046902 332 DLETNSLR 339 (393)
Q Consensus 332 d~~t~~~~ 339 (393)
|+.|.+..
T Consensus 399 D~~t~kvv 406 (426)
T 3c75_H 399 DAATGEEL 406 (426)
T ss_dssp ETTTCCEE
T ss_pred ECCCCCEE
Confidence 99998855
No 144
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=76.73 E-value=35 Score=29.24 Aligned_cols=190 Identities=15% Similarity=0.141 Sum_probs=90.0
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
+|+....+..+.|||..+++....-... ......+.+.|..+ .++... ....+.+|+.+++.-.
T Consensus 79 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~--~l~s~~-------~d~~i~iwd~~~~~~~ 142 (312)
T 4ery_A 79 LLVSASDDKTLKIWDVSSGKCLKTLKGH-------SNYVFCCNFNPQSN--LIVSGS-------FDESVRIWDVKTGKCL 142 (312)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECSSSS--EEEEEE-------TTSCEEEEETTTCCEE
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEcCC-------CCCEEEEEEcCCCC--EEEEEe-------CCCcEEEEECCCCEEE
Confidence 3444445678999999887644321111 12234555666432 222222 2345888998876422
Q ss_pred EccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEEEE
Q 046902 182 RISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVG 258 (393)
Q Consensus 182 ~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~ 258 (393)
. .++ .+. ..-..+. -+|.+...+.. ...|..+|+.+.+... +..... .... .+.
T Consensus 143 ~--~~~----------~~~--~~v~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~-----~~~~-~~~ 199 (312)
T 4ery_A 143 K--TLP----------AHS--DPVSAVHFNRDGSLIVSSSY---DGLCRIWDTASGQCLKTLIDDDN-----PPVS-FVK 199 (312)
T ss_dssp E--EEC----------CCS--SCEEEEEECTTSSEEEEEET---TSCEEEEETTTCCEEEEECCSSC-----CCEE-EEE
T ss_pred E--Eec----------CCC--CcEEEEEEcCCCCEEEEEeC---CCcEEEEECCCCceeeEEeccCC-----CceE-EEE
Confidence 1 111 000 0011121 24544433332 3568899998765433 221111 1111 222
Q ss_pred E-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEE-eCCcEEEEEEcCcEEEEEECCCC
Q 046902 259 S-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYS-RNGVKLLLEVRREKLVWFDLETN 336 (393)
Q Consensus 259 ~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~-~~g~~i~l~~~~~~l~~yd~~t~ 336 (393)
- -+|...++...+. .+.||-+... .....+...... . ......+. .++..++....++.+..||++++
T Consensus 200 ~~~~~~~l~~~~~d~-~i~iwd~~~~------~~~~~~~~~~~~-~--~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 200 FSPNGKYILAATLDN-TLKLWDYSKG------KCLKTYTGHKNE-K--YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp ECTTSSEEEEEETTT-EEEEEETTTT------EEEEEECSSCCS-S--SCCCEEEECSSSCEEEECCTTSCEEEEETTTC
T ss_pred ECCCCCEEEEEcCCC-eEEEEECCCC------cEEEEEEecCCc-e--EEEEEEEEeCCCcEEEEECCCCEEEEEECCCc
Confidence 2 2566555555444 8999977531 222333221100 0 01112222 35555555555667999999998
Q ss_pred cEEE
Q 046902 337 SLRT 340 (393)
Q Consensus 337 ~~~~ 340 (393)
+...
T Consensus 270 ~~~~ 273 (312)
T 4ery_A 270 EIVQ 273 (312)
T ss_dssp CEEE
T ss_pred hhhh
Confidence 7543
No 145
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=76.58 E-value=33 Score=29.76 Aligned_cols=115 Identities=9% Similarity=0.155 Sum_probs=60.9
Q ss_pred eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE-eCCeEEEEEEcCC-CeEEEEEEeecCCCC
Q 046902 210 AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS-LEGCLCVFRFYNL-VYVDMWMMKEHAVKE 287 (393)
Q Consensus 210 ~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~-~~~~iW~l~~~~~~~ 287 (393)
-+|.+||.... ...|..+|+.+.++..+..+... . -..++. -+|+|++...... ..-.|++++..+ .
T Consensus 54 ~~g~l~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~-----~-~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~--~ 122 (333)
T 2dg1_A 54 RQGQLFLLDVF---EGNIFKINPETKEIKRPFVSHKA-----N-PAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG--D 122 (333)
T ss_dssp TTSCEEEEETT---TCEEEEECTTTCCEEEEEECSSS-----S-EEEEEECTTSCEEEEECTTSSSCCEEEEECTTS--C
T ss_pred CCCCEEEEECC---CCEEEEEeCCCCcEEEEeeCCCC-----C-cceEEECCCCcEEEEeCCCCCCCceEEEEeCCC--C
Confidence 46888887543 35799999998887765322111 1 123444 3788887765430 112345554322 1
Q ss_pred CeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-------CcEEEEEECCCCcEEEE
Q 046902 288 SWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-------REKLVWFDLETNSLRTV 341 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-------~~~l~~yd~~t~~~~~v 341 (393)
.-... +.... ......-+.+.++|. +++... ...++.||+++++++.+
T Consensus 123 ~~~~~--~~~~~---~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 123 NLQDI--IEDLS---TAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp SCEEE--ECSSS---SCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEEEE--EccCc---cCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 11111 11100 011233456667765 555543 24699999998777655
No 146
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=76.17 E-value=40 Score=29.63 Aligned_cols=102 Identities=12% Similarity=0.109 Sum_probs=58.4
Q ss_pred cEEEEEECCCceeeeec-CCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCC
Q 046902 225 SVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTR 302 (393)
Q Consensus 225 ~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~ 302 (393)
..|..+|+.+..+..+. +.... ... ..+.-. +|.+.+.+..+. .+.||-++.. ..+..+..+....
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~~h~----~~v-~~v~~sp~~~~l~s~s~D~-~v~iwd~~~~---~~~~~~~~~~~h~--- 150 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLEGHE----NEV-KSVAWAPSGNLLATCSRDK-SVWVWEVDEE---DEYECVSVLNSHT--- 150 (345)
T ss_dssp SCEEEEEECCC-EEEEEEECCCS----SCE-EEEEECTTSSEEEEEETTS-CEEEEEECTT---SCEEEEEEECCCC---
T ss_pred CcEEEEEccCCCeEEEEEccCCC----CCc-eEEEEeCCCCEEEEEECCC-eEEEEECCCC---CCeEEEEEecCcC---
Confidence 45777887776554332 22111 111 133322 677666665544 8999998752 3455444443211
Q ss_pred CcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEE
Q 046902 303 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 340 (393)
Q Consensus 303 ~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~ 340 (393)
....-+.+.+++..|+....++.+..||.+++++..
T Consensus 151 --~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 151 --QDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC 186 (345)
T ss_dssp --SCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEE
T ss_pred --CCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEE
Confidence 123456677788777777766778889988876553
No 147
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=75.96 E-value=43 Score=29.84 Aligned_cols=97 Identities=8% Similarity=0.034 Sum_probs=54.0
Q ss_pred cEEEEEECCCceeee-ecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCC
Q 046902 225 SVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTR 302 (393)
Q Consensus 225 ~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~ 302 (393)
..|..+|+.+.+... +.... ... ..+... +|.+.++...+. .+.||-+.... .+..+....
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~------~~i-~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~------~~~~~~~~~--- 289 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHH------GPI-SVLEFNDTNKLLLSASDDG-TLRIWHGGNGN------SQNCFYGHS--- 289 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCS------SCE-EEEEEETTTTEEEEEETTS-CEEEECSSSBS------CSEEECCCS---
T ss_pred CeEEEEEcCCCceeeeeccCC------Cce-EEEEECCCCCEEEEEcCCC-EEEEEECCCCc------cceEecCCC---
Confidence 579999998764332 22111 111 123322 666555555443 89999876421 112222111
Q ss_pred CcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEEE
Q 046902 303 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 303 ~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v 341 (393)
....-+.+.++| .++....++.+..||+++++....
T Consensus 290 --~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 290 --QSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp --SCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEE
T ss_pred --ccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEe
Confidence 123456667776 677667777899999998875443
No 148
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=75.90 E-value=40 Score=29.47 Aligned_cols=195 Identities=11% Similarity=0.017 Sum_probs=91.9
Q ss_pred eEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCC--CeEEccccC-
Q 046902 111 ELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTN--SWRRISNLP- 187 (393)
Q Consensus 111 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~--~W~~~~~~p- 187 (393)
.++++||.|++....-... ......++.+|+..+ ++.... ....+.+|+.... .=..+....
T Consensus 70 ~i~~~d~~~g~~~~~~~~~------~~~~p~gia~d~~g~---l~v~d~------~~~~v~~~~~~g~~~~~~~~~~~~~ 134 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKN------LFYLPHGLSIDTDGN---YWVTDV------ALHQVFKLDPHSKEGPLLILGRSMQ 134 (329)
T ss_dssp CEEEECTTTCCEEEEECTT------TCSSEEEEEECTTSC---EEEEET------TTTEEEEECTTCSSCCSEEESBTTB
T ss_pred cEEEEECCCCeEEeccCCC------ccCCceEEEECCCCC---EEEEEC------CCCEEEEEeCCCCeEEEEEecccCC
Confidence 6999999988865422211 122345677786544 322221 2346777876543 112221100
Q ss_pred cccccccccccccccccCceeEe---CceEEEeccCCCCCcEEEEEECCCceeeeecCCCccc---ccCCceeEEEEEe-
Q 046902 188 RFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVN---VSYANVHVDVGSL- 260 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~---~~~~~~~~~l~~~- 260 (393)
... .........++.+ +|.+|+.... ....|..||........+..+.... ...-.....++..
T Consensus 135 ~g~-------~~~~~~~P~~ia~~~~~g~lyv~d~~--~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~ 205 (329)
T 3fvz_A 135 PGS-------DQNHFCQPTDVAVEPSTGAVFVSDGY--CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVP 205 (329)
T ss_dssp CCC-------STTCCSSEEEEEECTTTCCEEEEECS--SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEET
T ss_pred CCC-------CccccCCCcEEEEeCCCCeEEEEeCC--CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEEC
Confidence 000 0000112234443 6889988531 2368999996655555443211100 0000011244443
Q ss_pred C-CeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE--------cCcEEEEE
Q 046902 261 E-GCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV--------RREKLVWF 331 (393)
Q Consensus 261 ~-G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~--------~~~~l~~y 331 (393)
+ |.|+++..... .+.+|..+. ... +.++...... .....+++.+ +.++... ....++.+
T Consensus 206 ~~g~l~v~d~~~~-~I~~~~~~~----G~~--~~~~~~~~~~---~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~ 273 (329)
T 3fvz_A 206 HLDQLCVADRENG-RIQCFKTDT----KEF--VREIKHASFG---RNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVM 273 (329)
T ss_dssp TTTEEEEEETTTT-EEEEEETTT----CCE--EEEECCTTTT---TCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEE
T ss_pred CCCEEEEEECCCC-EEEEEECCC----CcE--EEEEeccccC---CCcceeeecC--CEEEEeCCCEEeccCCCcEEEEE
Confidence 4 88888876544 777776551 223 3334322111 0122334444 2333321 12358899
Q ss_pred ECCCCcEEEE
Q 046902 332 DLETNSLRTV 341 (393)
Q Consensus 332 d~~t~~~~~v 341 (393)
|+.++++...
T Consensus 274 ~~~~g~~~~~ 283 (329)
T 3fvz_A 274 NFSSGEIIDV 283 (329)
T ss_dssp ETTTCCEEEE
T ss_pred EcCCCeEEEE
Confidence 9888775543
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=75.53 E-value=27 Score=30.31 Aligned_cols=113 Identities=12% Similarity=0.064 Sum_probs=60.2
Q ss_pred eCceEEEeccCCCCCcEEEEEECCCceee-eecCCCcccccCCceeEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCC
Q 046902 210 AGGALHWVSPKSSTRSVIVAFDLVAEEFY-QLPLPDSVNVSYANVHVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKE 287 (393)
Q Consensus 210 ~~G~lyw~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~ 287 (393)
.++.+|..... ...|..+|+.+.+.. .+.++.... . . .+.. -+|+..++.......+.+|-++. .
T Consensus 9 ~~~~~~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~----~-~-~~~~s~dg~~~~v~~~~~~~i~~~d~~t----~ 75 (349)
T 1jmx_B 9 AGHEYMIVTNY---PNNLHVVDVASDTVYKSCVMPDKFG----P-G-TAMMAPDNRTAYVLNNHYGDIYGIDLDT----C 75 (349)
T ss_dssp TTCEEEEEEET---TTEEEEEETTTTEEEEEEECSSCCS----S-C-EEEECTTSSEEEEEETTTTEEEEEETTT----T
T ss_pred CCCEEEEEeCC---CCeEEEEECCCCcEEEEEecCCCCC----C-c-eeEECCCCCEEEEEeCCCCcEEEEeCCC----C
Confidence 34555555433 368999999887654 356654111 0 1 2222 35654333333334777775542 1
Q ss_pred CeEEEEEeeCCCCCC-CcceeeEEEEEeCCcEEEEEEcC------------cEEEEEECCCCc
Q 046902 288 SWTKLFSVQEPTPTR-SFLFLRPLGYSRNGVKLLLEVRR------------EKLVWFDLETNS 337 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~-~~~~~~~~~~~~~g~~i~l~~~~------------~~l~~yd~~t~~ 337 (393)
..+..+....... .......+.+.++|..+++...+ ..+..||+++++
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 76 --KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp --EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred --cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 2333444321000 00112346778888888887633 579999999844
No 150
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=75.49 E-value=40 Score=29.25 Aligned_cols=96 Identities=9% Similarity=0.084 Sum_probs=53.3
Q ss_pred cEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-------CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeC
Q 046902 225 SVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-------EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQE 297 (393)
Q Consensus 225 ~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-------~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~ 297 (393)
..|..+|+..+....+...... -..+... ++.+.+.... +..+.+|-++. ......+.-
T Consensus 129 ~~i~vwd~~~~~~~~~~~h~~~-------v~~~~~~~~~~~~~~~~~l~s~~~-d~~i~~wd~~~------~~~~~~~~~ 194 (319)
T 3frx_A 129 KTIKVWTIKGQCLATLLGHNDW-------VSQVRVVPNEKADDDSVTIISAGN-DKMVKAWNLNQ------FQIEADFIG 194 (319)
T ss_dssp SCEEEEETTSCEEEEECCCSSC-------EEEEEECCC------CCEEEEEET-TSCEEEEETTT------TEEEEEECC
T ss_pred CeEEEEECCCCeEEEEeccCCc-------EEEEEEccCCCCCCCccEEEEEeC-CCEEEEEECCc------chhheeecC
Confidence 4688888876655444321111 0111111 3334444443 44899998763 223333321
Q ss_pred CCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEE
Q 046902 298 PTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 339 (393)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~ 339 (393)
.. ....-+.+.++|..|+-...++.+..||+.+++..
T Consensus 195 h~-----~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 195 HN-----SNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp CC-----SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred CC-----CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 11 12445677888887777777778999999988643
No 151
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=75.43 E-value=43 Score=29.64 Aligned_cols=191 Identities=8% Similarity=-0.044 Sum_probs=88.3
Q ss_pred eeeceEEEe-eCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeC
Q 046902 98 SCNGLIALC-NSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLK 176 (393)
Q Consensus 98 s~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~ 176 (393)
+.+|-.++. ..+..+.|||..|++....-... ......+.+.+.... .++... ....+.+|+.+
T Consensus 136 spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h-------~~~V~~~~~~~~~~~-~l~s~s-------~D~~v~iwd~~ 200 (344)
T 4gqb_B 136 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAH-------AAQVTCVAASPHKDS-VFLSCS-------EDNRILLWDTR 200 (344)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEECSSCTT-EEEEEE-------TTSCEEEEETT
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCc-------CCceEEEEecCCCCC-ceeeec-------ccccccccccc
Confidence 335544433 34567999999998765422211 122344555554333 222222 23457889988
Q ss_pred CCCeEEccccCcccccccccccccccccCceeEe---CceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCc
Q 046902 177 TNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYAN 252 (393)
Q Consensus 177 t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~ 252 (393)
++.-...-... .......++.. ++.+...+.. ...|..+|+.+.+... +.... ..
T Consensus 201 ~~~~~~~~~~~------------~~~~~~~~~~~~p~~~~~l~sg~~---dg~v~~wd~~~~~~~~~~~~h~------~~ 259 (344)
T 4gqb_B 201 CPKPASQIGCS------------APGYLPTSLAWHPQQSEVFVFGDE---NGTVSLVDTKSTSCVLSSAVHS------QC 259 (344)
T ss_dssp SSSCEEECC----------------CCCEEEEEECSSCTTEEEEEET---TSEEEEEESCC--CCEEEECCS------SC
T ss_pred ccceeeeeecc------------eeeccceeeeecCCCCcceEEecc---CCcEEEEECCCCcEEEEEcCCC------CC
Confidence 76533211111 00000111221 2333333322 3568889988654322 22111 11
Q ss_pred eeEEEEEe-CC-eEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEE-EEcCcEEE
Q 046902 253 VHVDVGSL-EG-CLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLL-EVRREKLV 329 (393)
Q Consensus 253 ~~~~l~~~-~G-~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l-~~~~~~l~ 329 (393)
-..+.-. +| .+.+.+.. +..+.||-+.. -+. .+..- + .....-++++++|..++. ...++.+.
T Consensus 260 -v~~v~fsp~g~~~lasgs~-D~~i~vwd~~~------~~~-~~~~~-H----~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 260 -VTGLVFSPHSVPFLASLSE-DCSLAVLDSSL------SEL-FRSQA-H----RDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp -EEEEEECSSSSCCEEEEET-TSCEEEECTTC------CEE-EEECC-C----SSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred -EEEEEEccCCCeEEEEEeC-CCeEEEEECCC------CcE-EEEcC-C----CCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 1133332 45 44444444 44899995432 122 22211 1 112445677777765654 34566799
Q ss_pred EEECCCCcE
Q 046902 330 WFDLETNSL 338 (393)
Q Consensus 330 ~yd~~t~~~ 338 (393)
.|++.++.+
T Consensus 326 ~w~v~~~~~ 334 (344)
T 4gqb_B 326 HHVVPTEPL 334 (344)
T ss_dssp EEECCC---
T ss_pred EEECCCCCC
Confidence 999988754
No 152
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=75.36 E-value=41 Score=29.27 Aligned_cols=68 Identities=10% Similarity=0.045 Sum_probs=40.1
Q ss_pred CeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCC
Q 046902 262 GCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLET 335 (393)
Q Consensus 262 G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t 335 (393)
|.+.++...+. .+.||-++... ........+..... .....-+.+.++|..|+....++.+..||+.+
T Consensus 299 ~~~l~~~~~dg-~i~vwd~~~~~--~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQVG-KLYVWDLEVED--PHKAKCTTLTHHKC---GAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECTTS-CEEEEECCSSS--GGGCEEEEECCTTC---CSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEecCC-cEEEEECCCCC--CccccceEEccccc---CCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 66666655444 89999987532 11123333332110 11244567778888888777777899999864
No 153
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=75.07 E-value=40 Score=29.08 Aligned_cols=183 Identities=8% Similarity=-0.030 Sum_probs=90.7
Q ss_pred eEEEeeCCceEEEEeccccc----eeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEe-C
Q 046902 102 LIALCNSVQELALFNPSTRK----LKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSL-K 176 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~----~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss-~ 176 (393)
+|+....+..+.|||..+++ ...+... ......+.+.+. +.+.++... ....+.+|+. .
T Consensus 25 ~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~--------~~~v~~~~~~~~-~~~~l~~~~-------~dg~i~~wd~~~ 88 (342)
T 1yfq_A 25 LLLITSWDGSLTVYKFDIQAKNVDLLQSLRY--------KHPLLCCNFIDN-TDLQIYVGT-------VQGEILKVDLIG 88 (342)
T ss_dssp EEEEEETTSEEEEEEEETTTTEEEEEEEEEC--------SSCEEEEEEEES-SSEEEEEEE-------TTSCEEEECSSS
T ss_pred EEEEEcCCCeEEEEEeCCCCccccceeeeec--------CCceEEEEECCC-CCcEEEEEc-------CCCeEEEEEecc
Confidence 44444456789999988776 3332211 122345556654 332344333 2346888998 8
Q ss_pred CCCeEEccc--cCcccccccccccccccccCceeEe-CceEEEeccCCCCCcEEEEEECCC---------cee-eeecCC
Q 046902 177 TNSWRRISN--LPRFLRDFYDYLYHSLFRKGYGVLA-GGALHWVSPKSSTRSVIVAFDLVA---------EEF-YQLPLP 243 (393)
Q Consensus 177 t~~W~~~~~--~p~~~~~~~~~~~~~~~~~~~~v~~-~G~lyw~~~~~~~~~~il~fD~~~---------e~~-~~i~lP 243 (393)
++.-..+.. -. ..-..+.+ .|.....+.. ...|..+|+.+ .+. ..+..+
T Consensus 89 ~~~~~~~~~~~~~---------------~~v~~l~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T 1yfq_A 89 SPSFQALTNNEAN---------------LGICRICKYGDDKLIAASW---DGLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp SSSEEECBSCCCC---------------SCEEEEEEETTTEEEEEET---TSEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred CCceEeccccCCC---------------CceEEEEeCCCCEEEEEcC---CCeEEEEcccccccccccccCCeeeEEeeC
Confidence 776655433 11 00011111 1333333222 35788888765 221 111211
Q ss_pred CcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEe-CCcEEEEE
Q 046902 244 DSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSR-NGVKLLLE 322 (393)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~-~g~~i~l~ 322 (393)
. . -..+....+. .++.. ....+.+|-++..+ ...... ....... ...-+.+.+ ++..++..
T Consensus 151 ~-------~-v~~~~~~~~~-l~~~~-~d~~i~i~d~~~~~-~~~~~~-~~~~~~~------~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 151 N-------K-IFTMDTNSSR-LIVGM-NNSQVQWFRLPLCE-DDNGTI-EESGLKY------QIRDVALLPKEQEGYACS 212 (342)
T ss_dssp C-------C-EEEEEECSSE-EEEEE-STTEEEEEESSCCT-TCCCEE-EECSCSS------CEEEEEECSGGGCEEEEE
T ss_pred C-------c-eEEEEecCCc-EEEEe-CCCeEEEEECCccc-ccccee-eecCCCC------ceeEEEECCCCCCEEEEE
Confidence 1 1 1233434444 33333 34489999887511 111211 1111111 244567777 78878877
Q ss_pred EcCcEEEEEECCCC
Q 046902 323 VRREKLVWFDLETN 336 (393)
Q Consensus 323 ~~~~~l~~yd~~t~ 336 (393)
..++.+..||.+++
T Consensus 213 ~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 213 SIDGRVAVEFFDDQ 226 (342)
T ss_dssp ETTSEEEEEECCTT
T ss_pred ecCCcEEEEEEcCC
Confidence 77777888887765
No 154
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=74.80 E-value=39 Score=28.84 Aligned_cols=197 Identities=12% Similarity=0.024 Sum_probs=93.7
Q ss_pred CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEc-ccc
Q 046902 108 SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRI-SNL 186 (393)
Q Consensus 108 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~-~~~ 186 (393)
....++++||.+++...+..+. .. .......++.+|+..+ +++... ....+.+|+.. +..+.+ ...
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~--~~-~~~~~~~~i~~~~~~g--~l~v~~-------~~~~l~~~d~~-g~~~~~~~~~ 110 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPE--VN-GYGGIPAGCQCDRDAN--QLFVAD-------MRLGLLVVQTD-GTFEEIAKKD 110 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCE--ET-TEECCEEEEEECSSSS--EEEEEE-------TTTEEEEEETT-SCEEECCSBC
T ss_pred CCCEEEEEeCCCCcEEEEEecc--cC-CCCCCCceEEEecCCC--cEEEEE-------CCCCEEEEeCC-CCEEEEEecc
Confidence 3467999999998877654311 00 0012245666776523 232222 12267888888 776655 321
Q ss_pred CcccccccccccccccccCceeE--eCceEEEeccCC------------CCCcEEEEEECCCceeeeecCCCcccccCCc
Q 046902 187 PRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKS------------STRSVIVAFDLVAEEFYQLPLPDSVNVSYAN 252 (393)
Q Consensus 187 p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~------------~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~ 252 (393)
.. .........+. -+|.+|+..... .....|..+|.. .++..+.- ... ..
T Consensus 111 ~~----------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~---~~ 174 (314)
T 1pjx_A 111 SE----------GRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AFQ---FP 174 (314)
T ss_dssp TT----------SCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EES---SE
T ss_pred CC----------CccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CCC---Cc
Confidence 10 00001122333 367776654321 012578999987 55544311 110 01
Q ss_pred eeEEEEE-----eCC-eEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEee-CCCCCCCcceeeEEEEEeCCcEEEEEE-c
Q 046902 253 VHVDVGS-----LEG-CLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQ-EPTPTRSFLFLRPLGYSRNGVKLLLEV-R 324 (393)
Q Consensus 253 ~~~~l~~-----~~G-~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~-~~~~~~~~~~~~~~~~~~~g~~i~l~~-~ 324 (393)
..++. -+| .|++.... ...+.+|.++.. ........+. .... ......-+++.++|. +++.. .
T Consensus 175 --~~i~~~~~~d~dg~~l~v~~~~-~~~i~~~~~~~~---g~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~-l~v~~~~ 245 (314)
T 1pjx_A 175 --NGIAVRHMNDGRPYQLIVAETP-TKKLWSYDIKGP---AKIENKKVWGHIPGT--HEGGADGMDFDEDNN-LLVANWG 245 (314)
T ss_dssp --EEEEEEECTTSCEEEEEEEETT-TTEEEEEEEEET---TEEEEEEEEEECCCC--SSCEEEEEEEBTTCC-EEEEEET
T ss_pred --ceEEEecccCCCCCEEEEEECC-CCeEEEEECCCC---CccccceEEEECCCC--CCCCCCceEECCCCC-EEEEEcC
Confidence 12222 345 45555443 337777766532 2232222211 1110 001223355566775 55553 4
Q ss_pred CcEEEEEECCCCc-EEEEE
Q 046902 325 REKLVWFDLETNS-LRTVK 342 (393)
Q Consensus 325 ~~~l~~yd~~t~~-~~~v~ 342 (393)
...+..||+++++ ...+.
T Consensus 246 ~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp TTEEEEECTTCBSCSEEEE
T ss_pred CCEEEEEcCCCCcEeEEEe
Confidence 5679999999554 44443
No 155
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=74.61 E-value=38 Score=28.56 Aligned_cols=195 Identities=11% Similarity=0.143 Sum_probs=100.4
Q ss_pred EeeeeeceEEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEE
Q 046902 95 VLGSCNGLIALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVY 173 (393)
Q Consensus 95 ~~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vy 173 (393)
+....+|-|.+.. ....+.++||. ++...++.+. . .....++.+|+... +..... ....+.+|
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~---~---~~~~~~i~~~~~g~---l~v~~~------~~~~v~~~ 88 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPT---P---DAKVMCLIVSSLGD---IWFTEN------GANKIGKL 88 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSS---T---TCCEEEEEECTTSC---EEEEET------TTTEEEEE
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCC---C---CCcceeEEECCCCC---EEEEec------CCCeEEEE
Confidence 4444567666665 35679999998 7766554332 0 12234566675432 222211 23457778
Q ss_pred EeCCCCeEEccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCC
Q 046902 174 SLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYA 251 (393)
Q Consensus 174 ss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 251 (393)
+.. +.++.... +. .. ....++. -+|.+|+.... ...|..+|.. .+...+.+|.... .
T Consensus 89 d~~-g~~~~~~~-~~----------~~--~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~-g~~~~~~~~~~~~---~ 147 (300)
T 2qc5_A 89 SKK-GGFTEYPL-PQ----------PD--SGPYGITEGLNGDIWFTQLN---GDRIGKLTAD-GTIYEYDLPNKGS---Y 147 (300)
T ss_dssp CTT-SCEEEEEC-SS----------TT--CCEEEEEECSTTCEEEEETT---TTEEEEECTT-SCEEEEECSSTTC---C
T ss_pred CCC-CCeEEecC-CC----------CC--CCCccceECCCCCEEEEccC---CCeEEEECCC-CCEEEccCCCCCC---C
Confidence 777 66654421 10 00 1112333 35887766432 3579999998 6666666653221 1
Q ss_pred ceeEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEE
Q 046902 252 NVHVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLV 329 (393)
Q Consensus 252 ~~~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~ 329 (393)
...++. -+|+|++...... . |++++.. ..... ..++. . .....-+.+.++|. |++... ...+.
T Consensus 148 --~~~i~~d~~g~l~v~~~~~~-~--i~~~~~~---g~~~~-~~~~~-~----~~~~~~i~~d~~g~-l~v~~~~~~~i~ 212 (300)
T 2qc5_A 148 --PAFITLGSDNALWFTENQNN-S--IGRITNT---GKLEE-YPLPT-N----AAAPVGITSGNDGA-LWFVEIMGNKIG 212 (300)
T ss_dssp --EEEEEECTTSSEEEEETTTT-E--EEEECTT---CCEEE-EECSS-T----TCCEEEEEECTTSS-EEEEETTTTEEE
T ss_pred --ceeEEECCCCCEEEEecCCC-e--EEEECCC---CcEEE-eeCCC-C----CCCcceEEECCCCC-EEEEccCCCEEE
Confidence 123444 3688877664332 3 4444432 23332 22211 1 11123344555665 666543 45799
Q ss_pred EEECCCCcEEEEE
Q 046902 330 WFDLETNSLRTVK 342 (393)
Q Consensus 330 ~yd~~t~~~~~v~ 342 (393)
.||+ ++++..+.
T Consensus 213 ~~~~-~g~~~~~~ 224 (300)
T 2qc5_A 213 RITT-TGEISEYD 224 (300)
T ss_dssp EECT-TCCEEEEE
T ss_pred EEcC-CCcEEEEE
Confidence 9999 56655553
No 156
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=74.58 E-value=92 Score=32.98 Aligned_cols=197 Identities=10% Similarity=0.051 Sum_probs=95.0
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
+|+....+..+.|||..|++....-... ......+.+.+..+...++... ....+.+|+..++.-.
T Consensus 671 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~sg~-------~d~~v~vwd~~~~~~~ 736 (1249)
T 3sfz_A 671 YIATCSADKKVKIWDSATGKLVHTYDEH-------SEQVNCCHFTNKSNHLLLATGS-------NDFFLKLWDLNQKECR 736 (1249)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECSSSSCCEEEEEE-------TTSCEEEEETTSSSEE
T ss_pred EEEEEeCCCeEEEEECCCCceEEEEcCC-------CCcEEEEEEecCCCceEEEEEe-------CCCeEEEEECCCcchh
Confidence 4444445678999999998754422111 1223455666654444444333 2345888998877533
Q ss_pred EccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCccccc-------CCce
Q 046902 182 RISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVS-------YANV 253 (393)
Q Consensus 182 ~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~-------~~~~ 253 (393)
.. +. .+......-...-+|.....+.. ...|..+|+.+..... +..+...... ....
T Consensus 737 ~~--~~----------~h~~~v~~~~~sp~~~~l~s~s~---dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 801 (1249)
T 3sfz_A 737 NT--MF----------GHTNSVNHCRFSPDDELLASCSA---DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIV 801 (1249)
T ss_dssp EE--EC----------CCSSCEEEEEECSSTTEEEEEES---SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCB
T ss_pred he--ec----------CCCCCEEEEEEecCCCEEEEEEC---CCeEEEEeCCCCcccceecccccccccCCccccccceE
Confidence 21 11 00000000011123443333222 3578888887654322 2222110000 0000
Q ss_pred eEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEEC
Q 046902 254 HVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDL 333 (393)
Q Consensus 254 ~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~ 333 (393)
......-+|...++... ..+.+|-+.. .. ....+.... .....-+.+.++|..++....++.+..||.
T Consensus 802 ~~~~~s~dg~~l~~~~~--~~v~~~d~~~----~~--~~~~~~~~~----~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~ 869 (1249)
T 3sfz_A 802 KCCSWSADGDKIIVAAK--NKVLLFDIHT----SG--LLAEIHTGH----HSTIQYCDFSPYDHLAVIALSQYCVELWNI 869 (1249)
T ss_dssp CCCCBCTTSSEEEEEET--TEEEEEETTT----CC--EEEEEECSS----SSCCCEEEECSSTTEEEEECSSSCEEEEET
T ss_pred EEEEECCCCCEEEEEcC--CcEEEEEecC----CC--ceeEEcCCC----CCceEEEEEcCCCCEEEEEeCCCeEEEEEc
Confidence 00011125665555542 3788887653 11 222222111 012345677788887777776677999999
Q ss_pred CCCcEE
Q 046902 334 ETNSLR 339 (393)
Q Consensus 334 ~t~~~~ 339 (393)
++++..
T Consensus 870 ~~~~~~ 875 (1249)
T 3sfz_A 870 DSRLKV 875 (1249)
T ss_dssp TTTEEE
T ss_pred CCCcee
Confidence 887643
No 157
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=74.31 E-value=68 Score=31.39 Aligned_cols=249 Identities=12% Similarity=0.045 Sum_probs=126.4
Q ss_pred ceEEEeecCCCeeeecCCCCCCCCcccccCCCCCCCCccEE--eeeeeceEEEeeC-CceEEEEeccccceeccCCCCCC
Q 046902 55 NRRLILKGAHDLYALDFDTLTLGTGVQPHHHPLNIGSGTEV--LGSCNGLIALCNS-VQELALFNPSTRKLKTLPLPPCL 131 (393)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~ 131 (393)
..+|++.....+..++.+.... ....|+.......- +...+|.|...+. ...+..+++-......+-...
T Consensus 6 ~~~Ll~s~~~~I~~i~l~~~~~-----~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g-- 78 (628)
T 4a0p_A 6 EAFLLFSRRADIRRISLETNNN-----NVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFG-- 78 (628)
T ss_dssp CCEEEEEETTEEEEEESSCTTC-----EEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS--
T ss_pred CcEEEEEeCCcEEEEECCCCCc-----ceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCC--
Confidence 4466666666666666543211 11122221111112 2345677777763 457888888765444333222
Q ss_pred CCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEe-
Q 046902 132 VGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA- 210 (393)
Q Consensus 132 ~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~- 210 (393)
. ....|+++|...+ ++..... ....++++++....=+.+..-. + ....++.+
T Consensus 79 ~-----~~P~GlAvD~~~~--~LY~tD~------~~~~I~v~~~dG~~~~~l~~~~------------l--~~P~~iavd 131 (628)
T 4a0p_A 79 L-----DYPEGMAVDWLGK--NLYWADT------GTNRIEVSKLDGQHRQVLVWKD------------L--DSPRALALD 131 (628)
T ss_dssp C-----SCCCEEEEETTTT--EEEEEET------TTTEEEEEETTSTTCEEEECSS------------C--CCEEEEEEE
T ss_pred C-----CCcceEEEEeCCC--EEEEEEC------CCCEEEEEecCCCcEEEEEeCC------------C--CCcccEEEc
Confidence 1 1124677887655 3333221 3457888887644322221100 1 12234443
Q ss_pred --CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCC
Q 046902 211 --GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKES 288 (393)
Q Consensus 211 --~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~ 288 (393)
+|.|||.-.. ....|..+++....-..+- . .. .....+.+-..+++||++..... .||+.+-.+. ..
T Consensus 132 p~~G~lY~tD~g--~~~~I~r~~~dG~~~~~l~-~-~~---~~P~GlalD~~~~~LY~aD~~~~---~I~~~d~dG~-~~ 200 (628)
T 4a0p_A 132 PAEGFMYWTEWG--GKPKIDRAAMDGSERTTLV-P-NV---GRANGLTIDYAKRRLYWTDLDTN---LIESSNMLGL-NR 200 (628)
T ss_dssp TTTTEEEEEECS--SSCEEEEEETTSCSCEEEE-C-SC---SSEEEEEEETTTTEEEEEETTTT---EEEEEETTSC-SC
T ss_pred cCCCeEEEeCCC--CCCEEEEEeCCCCceEEEE-C-CC---CCcceEEEccccCEEEEEECCCC---EEEEEcCCCC-ce
Confidence 6999998532 2468999999765544332 1 11 11112233333789999886543 4566664442 22
Q ss_pred eEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEEECCCCcEEEEEEecCCCC-eeeeEEEEeccc
Q 046902 289 WTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTVKIDTHGLD-FVDTEICMASLV 361 (393)
Q Consensus 289 W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd~~t~~~~~v~~~~~~~~-~~~~~~y~~SL~ 361 (393)
+... . . ...|.++.-+++.||+... ...+..+|..+++-..+-. .+.. -..+.+|.++.-
T Consensus 201 -~v~~--~--~------l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~--~~~~~p~~i~v~~~~~q 262 (628)
T 4a0p_A 201 -EVIA--D--D------LPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQ--GHLDYVMDILVFHSSRQ 262 (628)
T ss_dssp -EEEE--E--C------CSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE--CSCCSCCEEEEECGGGS
T ss_pred -EEee--c--c------CCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEe--cCCCCcceeeeeeeccc
Confidence 2111 1 1 2346666555678888764 4579999987765333322 2322 345666766543
No 158
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=73.80 E-value=43 Score=28.80 Aligned_cols=194 Identities=13% Similarity=0.123 Sum_probs=103.6
Q ss_pred eceEEEeeC---CceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEe
Q 046902 100 NGLIALCNS---VQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSL 175 (393)
Q Consensus 100 ~GLl~~~~~---~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss 175 (393)
+|.|..... ...+.+.++.|++... +|... .....|+..+. + ++..... ....+.||+.
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~-------~~fgeGi~~~g--~--~lyv~t~------~~~~v~viD~ 93 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD-------SYFGEGLTLLN--E--KLYQVVW------LKNIGFIYDR 93 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT-------TCCEEEEEEET--T--EEEEEET------TCSEEEEEET
T ss_pred CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC-------CcceEEEEEeC--C--EEEEEEe------cCCEEEEEEC
Confidence 377766642 4689999999988554 33222 12233455552 2 4444331 3457889998
Q ss_pred CCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCce-eeeecCCCcccccCCcee
Q 046902 176 KTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEE-FYQLPLPDSVNVSYANVH 254 (393)
Q Consensus 176 ~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~-~~~i~lP~~~~~~~~~~~ 254 (393)
.+. +.+..++ .. .....++..+|.-.|.+. ....|..+|+++.+ -..++....... ... -
T Consensus 94 ~t~--~v~~~i~----------~g--~~~g~glt~Dg~~l~vs~---gs~~l~viD~~t~~v~~~I~Vg~~~~p-~~~-~ 154 (266)
T 2iwa_A 94 RTL--SNIKNFT----------HQ--MKDGWGLATDGKILYGSD---GTSILYEIDPHTFKLIKKHNVKYNGHR-VIR-L 154 (266)
T ss_dssp TTT--EEEEEEE----------CC--SSSCCEEEECSSSEEEEC---SSSEEEEECTTTCCEEEEEECEETTEE-CCC-E
T ss_pred CCC--cEEEEEE----------CC--CCCeEEEEECCCEEEEEC---CCCeEEEEECCCCcEEEEEEECCCCcc-ccc-c
Confidence 865 3333333 11 012234666665444543 25689999998744 344554321100 000 1
Q ss_pred EEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCC--------CCcceeeEEEEEeCCcEEEEEEcC-
Q 046902 255 VDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPT--------RSFLFLRPLGYSRNGVKLLLEVRR- 325 (393)
Q Consensus 255 ~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~--------~~~~~~~~~~~~~~g~~i~l~~~~- 325 (393)
-.+...+|.|++...... .|.+.+- ..+..+.+|+..... .......-+++.++++.+|+..+.
T Consensus 155 nele~~dg~lyvn~~~~~---~V~vID~----~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 155 NELEYINGEVWANIWQTD---CIARISA----KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp EEEEEETTEEEEEETTSS---EEEEEET----TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred eeEEEECCEEEEecCCCC---eEEEEEC----CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 123333888886654333 5666763 345667777763110 001123446667788888887643
Q ss_pred cEEEEEECCCC
Q 046902 326 EKLVWFDLETN 336 (393)
Q Consensus 326 ~~l~~yd~~t~ 336 (393)
.+|+..++.+.
T Consensus 228 ~~v~~i~l~~~ 238 (266)
T 2iwa_A 228 PKLFEIKLHLV 238 (266)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEecc
Confidence 46777776554
No 159
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=73.71 E-value=63 Score=30.67 Aligned_cols=106 Identities=8% Similarity=-0.023 Sum_probs=57.5
Q ss_pred CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-----------CCeEEEEEEcCCCeEEEEE
Q 046902 211 GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-----------EGCLCVFRFYNLVYVDMWM 279 (393)
Q Consensus 211 ~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-----------~G~L~~~~~~~~~~~~iW~ 279 (393)
+|.+...+.. ...|..+|+.+.+.... +.... .... ..+.-. +|.+.+....+. .+.||.
T Consensus 499 ~g~~l~~~~~---dg~i~iw~~~~~~~~~~-~~~~h---~~~v-~~~~~sp~~~~~~~~~~~~~~l~~~~~dg-~i~iw~ 569 (615)
T 1pgu_A 499 SETYIAAGDV---MGKILLYDLQSREVKTS-RWAFR---TSKI-NAISWKPAEKGANEEEIEEDLVATGSLDT-NIFIYS 569 (615)
T ss_dssp TSSEEEEEET---TSCEEEEETTTTEEEEC-CSCCC---SSCE-EEEEECCCC------CCSCCEEEEEETTS-CEEEEE
T ss_pred CCCEEEEcCC---CCeEEEeeCCCCcceeE-eecCC---CCce-eEEEEcCccccccccccCCCEEEEEcCCC-cEEEEE
Confidence 5655544433 35688999987655332 11101 0111 122222 567666665544 999999
Q ss_pred EeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCC
Q 046902 280 MKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETN 336 (393)
Q Consensus 280 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~ 336 (393)
++..+ ..+..+... .....-+.+.++|. |+....++.+..||++++
T Consensus 570 ~~~~~-----~~~~~~~~h-----~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 570 VKRPM-----KIIKALNAH-----KDGVNNLLWETPST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp SSCTT-----CCEEETTSS-----TTCEEEEEEEETTE-EEEEETTSCEEEEEEC--
T ss_pred CCCCc-----eechhhhcC-----ccceEEEEEcCCCC-eEEecCCceEEEEeeecC
Confidence 87521 122222211 11244567788887 666666677999998764
No 160
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=73.51 E-value=50 Score=29.43 Aligned_cols=195 Identities=11% Similarity=0.065 Sum_probs=95.9
Q ss_pred eeece-EEEee--CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEE
Q 046902 98 SCNGL-IALCN--SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYS 174 (393)
Q Consensus 98 s~~GL-l~~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vys 174 (393)
|-+|- +.+.. .+..+.|||+.|++........ .. ...+.|.|... .++... ...+.++.
T Consensus 142 SpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~------~~--V~~v~fspdg~---~l~s~s-------~~~~~~~~ 203 (365)
T 4h5i_A 142 SREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETR------GE--VKDLHFSTDGK---VVAYIT-------GSSLEVIS 203 (365)
T ss_dssp CTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECS------SC--CCEEEECTTSS---EEEEEC-------SSCEEEEE
T ss_pred cCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCC------Cc--eEEEEEccCCc---eEEecc-------ceeEEEEE
Confidence 44553 33332 3467999999998866544322 11 23455655432 222221 12356666
Q ss_pred eCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccC-CCCCcEEEEEECCCceeeeec---CCCcccccC
Q 046902 175 LKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPK-SSTRSVIVAFDLVAEEFYQLP---LPDSVNVSY 250 (393)
Q Consensus 175 s~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~-~~~~~~il~fD~~~e~~~~i~---lP~~~~~~~ 250 (393)
..++.-....... .+......-...-+|.....+.. ......+..+|+......... +....
T Consensus 204 ~~~~~~~~~~~~~----------~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---- 269 (365)
T 4h5i_A 204 TVTGSCIARKTDF----------DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRF---- 269 (365)
T ss_dssp TTTCCEEEEECCC----------CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSC----
T ss_pred eccCcceeeeecC----------CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCC----
Confidence 6665433211111 00000011112235554444332 122235666776655544322 11111
Q ss_pred CceeEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEE
Q 046902 251 ANVHVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLV 329 (393)
Q Consensus 251 ~~~~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~ 329 (393)
... ..+.. -+|++.+.+..+. .+.||-++. ...+.++.-.. .....-+++.++|..|+-...++.+-
T Consensus 270 ~~V-~~~~~Spdg~~lasgs~D~-~V~iwd~~~------~~~~~~~~~gH----~~~V~~v~fSpdg~~laS~S~D~tvr 337 (365)
T 4h5i_A 270 KGI-TSMDVDMKGELAVLASNDN-SIALVKLKD------LSMSKIFKQAH----SFAITEVTISPDSTYVASVSAANTIH 337 (365)
T ss_dssp SCE-EEEEECTTSCEEEEEETTS-CEEEEETTT------TEEEEEETTSS----SSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred CCe-EeEEECCCCCceEEEcCCC-EEEEEECCC------CcEEEEecCcc----cCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 111 12332 3777766666544 899997653 23444442211 11245678889988777677777899
Q ss_pred EEECCCC
Q 046902 330 WFDLETN 336 (393)
Q Consensus 330 ~yd~~t~ 336 (393)
++|+.++
T Consensus 338 vw~ip~~ 344 (365)
T 4h5i_A 338 IIKLPLN 344 (365)
T ss_dssp EEECCTT
T ss_pred EEEcCCC
Confidence 9998654
No 161
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=72.95 E-value=47 Score=28.86 Aligned_cols=198 Identities=15% Similarity=0.101 Sum_probs=95.8
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
+|+....+..+.|||..+++....-... .....++.+.|..+.+- +... ....+.+|+.+++.-.
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~l-~s~~-------~dg~i~iwd~~~~~~~ 151 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYVGH-------GNAINELKFHPRDPNLL-LSVS-------KDHALRLWNIQTDTLV 151 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEESC-------CSCEEEEEECSSCTTEE-EEEE-------TTSCEEEEETTTTEEE
T ss_pred EEEEecCCCEEEEEEchhceEeeeecCC-------CCcEEEEEECCCCCCEE-EEEe-------CCCeEEEEEeecCeEE
Confidence 4444446678999999987754322111 22345666776433332 2222 2346889998876433
Q ss_pred Ecc-ccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCceeee-ec----------------
Q 046902 182 RIS-NLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LP---------------- 241 (393)
Q Consensus 182 ~~~-~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~---------------- 241 (393)
..- .+. .+. ..-..+. -+|.....+.. ...|..+|+.+.+... +.
T Consensus 152 ~~~~~~~----------~~~--~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (366)
T 3k26_A 152 AIFGGVE----------GHR--DEVLSADYDLLGEKIMSCGM---DHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFIS 216 (366)
T ss_dssp EEECSTT----------SCS--SCEEEEEECTTSSEEEEEET---TSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCC
T ss_pred EEecccc----------ccc--CceeEEEECCCCCEEEEecC---CCCEEEEECCCCccccccceeEEecCCCCcccccc
Confidence 221 101 000 0111122 13443333322 2578899988654321 10
Q ss_pred ----CCCcccc--cCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCC--------CCCeEEEEEeeCCCCCCCccee
Q 046902 242 ----LPDSVNV--SYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAV--------KESWTKLFSVQEPTPTRSFLFL 307 (393)
Q Consensus 242 ----lP~~~~~--~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~--------~~~W~~~~~i~~~~~~~~~~~~ 307 (393)
.|..... ..... ..+.-. |.+.+.... +..+.+|-+..... ......+..+..... ..
T Consensus 217 ~~~~~~~~~~~~~~~~~v-~~~~~~-~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v 288 (366)
T 3k26_A 217 QKIHFPDFSTRDIHRNYV-DCVRWL-GDLILSKSC-ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQC-----DI 288 (366)
T ss_dssp EEECCCSEEECSSCSSCC-CEEEEE-TTEEEEECS-SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSC-----CS
T ss_pred eeeccCccccccCCcceE-EEEEEc-CCEEEEEec-CCEEEEEeCCCccccccccccCCcchheeccccccCC-----cE
Confidence 0000000 00111 122222 555555444 44999999864321 112233343332110 12
Q ss_pred eEEEEEeC--CcEEEEEEcCcEEEEEECCCCc
Q 046902 308 RPLGYSRN--GVKLLLEVRREKLVWFDLETNS 337 (393)
Q Consensus 308 ~~~~~~~~--g~~i~l~~~~~~l~~yd~~t~~ 337 (393)
.-+.+.++ |..|+....++.+..||+.+++
T Consensus 289 ~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 289 WYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp SCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 33455666 8877777766779999999874
No 162
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=72.70 E-value=77 Score=31.26 Aligned_cols=116 Identities=13% Similarity=0.127 Sum_probs=64.7
Q ss_pred eCceEEEeccCCCCCcEEEEEECCCc---eeeeecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCC
Q 046902 210 AGGALHWVSPKSSTRSVIVAFDLVAE---EFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVK 286 (393)
Q Consensus 210 ~~G~lyw~~~~~~~~~~il~fD~~~e---~~~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~ 286 (393)
-++.+|+++........|+..|+.+. .|+.+. |... .. . .+...++.|.+...... .-.|++++-.
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~----~~-~-~~s~~g~~lv~~~~~~g-~~~l~~~d~~--- 358 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI-PERQ----QV-L-TVHSGSGYLFAEYMVDA-TARVEQFDYE--- 358 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE-CCCS----SC-E-EEEEETTEEEEEEEETT-EEEEEEECTT---
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe-cCCC----CE-E-EEEEECCEEEEEEEECC-eeEEEEEECC---
Confidence 46788888765333578999999863 356542 2221 11 2 44555667766665443 4455555432
Q ss_pred CCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC----cEEEEEECCCCcEEEEE
Q 046902 287 ESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR----EKLVWFDLETNSLRTVK 342 (393)
Q Consensus 287 ~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~----~~l~~yd~~t~~~~~v~ 342 (393)
..+. ..+..+.. .....++..++++.+++...+ ..++.||+++++.+.+.
T Consensus 359 g~~~--~~l~~p~~----~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 359 GKRV--REVALPGL----GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp SCEE--EEECCSSS----SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred CCee--EEeecCCC----ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 2333 33443211 011222333467777776543 47999999999877663
No 163
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=72.64 E-value=49 Score=28.94 Aligned_cols=205 Identities=10% Similarity=0.068 Sum_probs=101.6
Q ss_pred EEeeeeeceEEEeeCCceEEEEecccccee-ccCCCCCCCCCCCCceEEEEeeeCC-CCCeEEEEEEEeecCCCCccEEE
Q 046902 94 EVLGSCNGLIALCNSVQELALFNPSTRKLK-TLPLPPCLVGFPSAFTFYGFGQDKI-NDDYKLVRVLHFKGNDGDDVEVE 171 (393)
Q Consensus 94 ~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~d~~-~~~ykVv~~~~~~~~~~~~~~~~ 171 (393)
.+.++.+|-+.+-.....+.++|..+++.. .+.... ......+.++|. .+.+ ++... ....+.
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~-l~s~s-------~dg~i~ 152 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS-------ANEIIYMYGHNEVNTEY-FIWAD-------NRGTIG 152 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC-------SSCEEEEECCC---CCE-EEEEE-------TTCCEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC-------CCCEEEEEcCCCCCCCE-EEEEe-------CCCcEE
Confidence 455677888877776777888888888733 222111 123455667762 2223 33222 234688
Q ss_pred EEEeCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCC
Q 046902 172 VYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYA 251 (393)
Q Consensus 172 Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 251 (393)
+|+.+++.-....... . ......-...-+|.+...+.. ...|..+|+.+.+.....+.... ..
T Consensus 153 ~wd~~~~~~~~~~~~~----------~-~~~i~~~~~~pdg~~lasg~~---dg~i~iwd~~~~~~~~~~~~~~h---~~ 215 (343)
T 3lrv_A 153 FQSYEDDSQYIVHSAK----------S-DVEYSSGVLHKDSLLLALYSP---DGILDVYNLSSPDQASSRFPVDE---EA 215 (343)
T ss_dssp EEESSSSCEEEEECCC----------S-SCCCCEEEECTTSCEEEEECT---TSCEEEEESSCTTSCCEECCCCT---TS
T ss_pred EEECCCCcEEEEEecC----------C-CCceEEEEECCCCCEEEEEcC---CCEEEEEECCCCCCCccEEeccC---CC
Confidence 9998877653221111 0 000011111224555444332 35799999987764412222201 11
Q ss_pred ceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCccee-eEEEEEeCCcEEEEEEc-CcEE
Q 046902 252 NVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFL-RPLGYSRNGVKLLLEVR-REKL 328 (393)
Q Consensus 252 ~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~-~~~~~~~~g~~i~l~~~-~~~l 328 (393)
. -..+.-. +|...+... +. .+.||-+....... .+..... ...... .-+++.++|..++.... +..+
T Consensus 216 ~-v~~l~fs~~g~~l~s~~-~~-~v~iwd~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~g~~l~~~s~~d~~i 285 (343)
T 3lrv_A 216 K-IKEVKFADNGYWMVVEC-DQ-TVVCFDLRKDVGTL------AYPTYTI-PEFKTGTVTYDIDDSGKNMIAYSNESNSL 285 (343)
T ss_dssp C-EEEEEECTTSSEEEEEE-SS-BEEEEETTSSTTCB------SSCCCBC------CCEEEEECTTSSEEEEEETTTTEE
T ss_pred C-EEEEEEeCCCCEEEEEe-CC-eEEEEEcCCCCcce------eeccccc-ccccccceEEEECCCCCEEEEecCCCCcE
Confidence 1 1133333 666555555 44 99999887532111 1111000 000000 24777788887776555 5667
Q ss_pred EEEEC--CCCcEEE
Q 046902 329 VWFDL--ETNSLRT 340 (393)
Q Consensus 329 ~~yd~--~t~~~~~ 340 (393)
..||. ..+.|+.
T Consensus 286 ~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 286 TIYKFDKKTKNWTK 299 (343)
T ss_dssp EEEEECTTTCSEEE
T ss_pred EEEEEcccccceEe
Confidence 77777 4455665
No 164
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=70.50 E-value=59 Score=28.98 Aligned_cols=68 Identities=9% Similarity=0.218 Sum_probs=37.2
Q ss_pred CeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCC-CCcceeeEEEEEeCC-cEEEEEEcCc---EEEEEECCCC
Q 046902 262 GCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPT-RSFLFLRPLGYSRNG-VKLLLEVRRE---KLVWFDLETN 336 (393)
Q Consensus 262 G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~-~~~~~~~~~~~~~~g-~~i~l~~~~~---~l~~yd~~t~ 336 (393)
+.+.+....+ ..+.||-++. . ..+..+...... .......-+.+.++| ..++....+. .+..||+++.
T Consensus 178 ~~~l~~~~~d-g~v~iwd~~~----~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 178 AHVFASAGSS-NFASIWDLKA----K--KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp TTEEEEESSS-SCEEEEETTT----T--EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred CcEEEEEcCC-CCEEEEECCC----C--CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 5565555444 4899998764 1 233344332100 001124456677776 3555555554 6899998874
No 165
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=70.27 E-value=52 Score=28.29 Aligned_cols=196 Identities=9% Similarity=0.010 Sum_probs=95.8
Q ss_pred EEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 103 IALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 103 l~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
|++.+ ....++.++| +++...+..+. ....++.+|+... ++.... ....+.+|+.. ++.+
T Consensus 59 l~~~d~~~~~i~~~~~-~g~~~~~~~~~--------~~~~gl~~d~dG~---l~v~~~------~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRE-DGTVDVLLDAT--------AFTNGNAVDAQQR---LVHCEH------GRRAITRSDAD-GQAH 119 (305)
T ss_dssp EEEEETTTTEEEEEET-TSCEEEEEESC--------SCEEEEEECTTSC---EEEEET------TTTEEEEECTT-SCEE
T ss_pred EEEEECCCCEEEEEeC-CCCEEEEeCCC--------CccceeeECCCCC---EEEEEC------CCCEEEEECCC-CCEE
Confidence 44443 4567888998 66554443322 1235677777542 332221 22467777765 6665
Q ss_pred EccccCcccccccccccccccccCceeEeCceEEEe----ccC----------CCCCcEEEEEECCCceeeeecCCCccc
Q 046902 182 RISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWV----SPK----------SSTRSVIVAFDLVAEEFYQLPLPDSVN 247 (393)
Q Consensus 182 ~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~----~~~----------~~~~~~il~fD~~~e~~~~i~lP~~~~ 247 (393)
.+...... ........-.+.-+|.+|+. +.. ......|..+|..+.++..+. ...
T Consensus 120 ~~~~~~~~--------~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~ 188 (305)
T 3dr2_A 120 LLVGRYAG--------KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLD 188 (305)
T ss_dssp EEECEETT--------EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EES
T ss_pred EEEeccCC--------CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCC
Confidence 54321100 00000111122347887773 110 011357999999888777654 111
Q ss_pred ccCCceeEEEEEe-CCe-EEEEEEcC----CCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEE
Q 046902 248 VSYANVHVDVGSL-EGC-LCVFRFYN----LVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLL 321 (393)
Q Consensus 248 ~~~~~~~~~l~~~-~G~-L~~~~~~~----~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l 321 (393)
.. ..++.. +|+ |+++.... ...+.+|.++. .. ......+.... .....-+.+.++|+ |++
T Consensus 189 ---~p--~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~---~~-l~~~~~~~~~~----~~~pdgi~~d~~G~-lwv 254 (305)
T 3dr2_A 189 ---HP--NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD---GA-LHDRRHFASVP----DGLPDGFCVDRGGW-LWS 254 (305)
T ss_dssp ---SE--EEEEECTTSSEEEEEECCC---CCCEEEEEEEET---TE-EEEEEEEECCS----SSCCCSEEECTTSC-EEE
T ss_pred ---CC--cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC---CC-ccCCeEEEECC----CCCCCeEEECCCCC-EEE
Confidence 11 123333 565 66665432 12444444432 11 22212111100 01123356667776 666
Q ss_pred EEcCcEEEEEECCCCcEEEEEE
Q 046902 322 EVRREKLVWFDLETNSLRTVKI 343 (393)
Q Consensus 322 ~~~~~~l~~yd~~t~~~~~v~~ 343 (393)
... ..|..||++++.+..+..
T Consensus 255 ~~~-~gv~~~~~~g~~~~~~~~ 275 (305)
T 3dr2_A 255 SSG-TGVCVFDSDGQLLGHIPT 275 (305)
T ss_dssp CCS-SEEEEECTTSCEEEEEEC
T ss_pred ecC-CcEEEECCCCCEEEEEEC
Confidence 654 469999999888887765
No 166
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=68.83 E-value=44 Score=29.04 Aligned_cols=53 Identities=15% Similarity=0.249 Sum_probs=33.1
Q ss_pred cEEEEEECCCceeeeecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEe
Q 046902 225 SVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMK 281 (393)
Q Consensus 225 ~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~ 281 (393)
..|..||...+....+..|..... .. ...++..+|.|++...... .+.+..++
T Consensus 260 ~~v~~~d~~G~~~~~~~~~~g~~~--~~-~~~~~~~~g~L~v~~~~~~-~i~~~~~~ 312 (322)
T 2fp8_A 260 PKGIKFDEFGNILEVIPLPPPFAG--EH-FEQIQEHDGLLYIGTLFHG-SVGILVYD 312 (322)
T ss_dssp EEEEEECTTSCEEEEEECCTTTTT--SC-CCEEEEETTEEEEECSSCS-EEEEEEC-
T ss_pred cEEEEECCCCCEEEEEECCCCCcc--cc-ceEEEEeCCEEEEeecCCC-ceEEEecc
Confidence 569999998777778888764210 11 1134456899998765443 66655554
No 167
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=68.79 E-value=57 Score=28.15 Aligned_cols=107 Identities=12% Similarity=0.136 Sum_probs=59.1
Q ss_pred eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCC
Q 046902 210 AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKES 288 (393)
Q Consensus 210 ~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~ 288 (393)
-+|.+||.... ...|..+|...+.-..+..+... ..++. -+|+|+++..... ...|++++.. ...
T Consensus 41 ~~g~lyv~d~~---~~~I~~~d~~g~~~~~~~~~~~p--------~gia~~~dG~l~vad~~~~-~~~v~~~d~~--~g~ 106 (306)
T 2p4o_A 41 PDGTIFVTNHE---VGEIVSITPDGNQQIHATVEGKV--------SGLAFTSNGDLVATGWNAD-SIPVVSLVKS--DGT 106 (306)
T ss_dssp TTSCEEEEETT---TTEEEEECTTCCEEEEEECSSEE--------EEEEECTTSCEEEEEECTT-SCEEEEEECT--TSC
T ss_pred CCCCEEEEeCC---CCeEEEECCCCceEEEEeCCCCc--------eeEEEcCCCcEEEEeccCC-cceEEEEcCC--CCe
Confidence 36889998533 35799999887644444444221 13443 3788887765432 3456666532 234
Q ss_pred eEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-cCcEEEEEECCCCc
Q 046902 289 WTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFDLETNS 337 (393)
Q Consensus 289 W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~yd~~t~~ 337 (393)
.+.+..+... ....-++.+. ++.+++.. ....++.+|+.+++
T Consensus 107 ~~~~~~~~~~------~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 107 VETLLTLPDA------IFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp EEEEEECTTC------SCEEEEEESS-SSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEeCCCc------cccCcccccC-CCcEEEEECCCCeEEEEeCCCCc
Confidence 4444433211 1122233344 34566654 34579999998764
No 168
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=68.73 E-value=57 Score=28.17 Aligned_cols=108 Identities=9% Similarity=-0.028 Sum_probs=58.8
Q ss_pred CceEEEeccCCCCCcEEEEEECCCceeeeec-CCCcccccCCceeEEEEEe----CCeEEEEEEcCCCeEEEEEEeecCC
Q 046902 211 GGALHWVSPKSSTRSVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVGSL----EGCLCVFRFYNLVYVDMWMMKEHAV 285 (393)
Q Consensus 211 ~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~~~----~G~L~~~~~~~~~~~~iW~l~~~~~ 285 (393)
+|.+...+.. ...|..+|+.+.+..... .+.. -..+.-. +|...++...+. .+.+|-+.....
T Consensus 179 ~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~ 246 (357)
T 3i2n_A 179 EERVVCAGYD---NGDIKLFDLRNMALRWETNIKNG--------VCSLEFDRKDISMNKLVATSLEG-KFHVFDMRTQHP 246 (357)
T ss_dssp CCCEEEEEET---TSEEEEEETTTTEEEEEEECSSC--------EEEEEESCSSSSCCEEEEEESTT-EEEEEEEEEEET
T ss_pred CCCEEEEEcc---CCeEEEEECccCceeeecCCCCc--------eEEEEcCCCCCCCCEEEEECCCC-eEEEEeCcCCCc
Confidence 5555444433 357999999887754331 1111 1233333 566666665444 899999876322
Q ss_pred CCCeEEEEEeeCCCCCCCcceeeEEEEEeCCc-EEEEEEcCcEEEEEECCCC
Q 046902 286 KESWTKLFSVQEPTPTRSFLFLRPLGYSRNGV-KLLLEVRREKLVWFDLETN 336 (393)
Q Consensus 286 ~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~-~i~l~~~~~~l~~yd~~t~ 336 (393)
....... ...... ....-+.+.++|. .++....++.+..||+++.
T Consensus 247 ~~~~~~~-~~~~~~-----~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 247 TKGFASV-SEKAHK-----STVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp TTEEEEE-EEECCS-----SCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred ccceeee-ccCCCc-----CCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 1222211 111111 1244566777766 4555556677999998864
No 169
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=68.45 E-value=66 Score=28.81 Aligned_cols=97 Identities=12% Similarity=0.146 Sum_probs=52.5
Q ss_pred cEEEEEECCCceeeee-cCCCcccccCCceeEEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCC--
Q 046902 225 SVIVAFDLVAEEFYQL-PLPDSVNVSYANVHVDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPT-- 299 (393)
Q Consensus 225 ~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~-- 299 (393)
..|..+|+.+.+.... ...... ..+... +|.+.+.+..+. .+.||-++. .. .+..+....
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~v--------~~~~~~~~~~~~l~~~s~d~-~v~iwd~~~----~~--~~~~~~~~~~~ 251 (393)
T 1erj_A 187 RTVRIWDLRTGQCSLTLSIEDGV--------TTVAVSPGDGKYIAAGSLDR-AVRVWDSET----GF--LVERLDSENES 251 (393)
T ss_dssp SEEEEEETTTTEEEEEEECSSCE--------EEEEECSTTCCEEEEEETTS-CEEEEETTT----CC--EEEEEC-----
T ss_pred CcEEEEECCCCeeEEEEEcCCCc--------EEEEEECCCCCEEEEEcCCC-cEEEEECCC----Cc--EEEeecccccC
Confidence 5788899988765432 222111 123332 677766666544 899997653 11 222222110
Q ss_pred CCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCC
Q 046902 300 PTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETN 336 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~ 336 (393)
.........-+.+.++|..|+....++.+..||+.+.
T Consensus 252 ~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 252 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred CCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 0111112345677788887777777778999999864
No 170
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=68.41 E-value=93 Score=30.47 Aligned_cols=186 Identities=13% Similarity=0.090 Sum_probs=85.9
Q ss_pred CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccC
Q 046902 108 SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLP 187 (393)
Q Consensus 108 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p 187 (393)
.+..+.|||..+.....+.... ..+......+.+.+....-.++... ....+.+|+.+++.-... +.
T Consensus 492 ~D~~i~iwd~~~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~~l~s~s-------~d~~v~vwd~~~~~~~~~--~~ 558 (694)
T 3dm0_A 492 RDRTIKLWNTLGECKYTISEGG----EGHRDWVSCVRFSPNTLQPTIVSAS-------WDKTVKVWNLSNCKLRST--LA 558 (694)
T ss_dssp TTSCEEEECTTSCEEEEECSST----TSCSSCEEEEEECSCSSSCEEEEEE-------TTSCEEEEETTTCCEEEE--EC
T ss_pred CCCEEEEEECCCCcceeeccCC----CCCCCcEEEEEEeCCCCcceEEEEe-------CCCeEEEEECCCCcEEEE--Ec
Confidence 3456778886655443333221 0112233455666654333344333 234588888877643221 11
Q ss_pred cccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-CCeEEE
Q 046902 188 RFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCV 266 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-~G~L~~ 266 (393)
.+......-...-+|.+...+.. ...|..+|+.+.+-.. .+... .. ...+.-. +|.+..
T Consensus 559 ----------~h~~~v~~v~~spdg~~l~sg~~---Dg~i~iwd~~~~~~~~-~~~~~-----~~-v~~~~~sp~~~~l~ 618 (694)
T 3dm0_A 559 ----------GHTGYVSTVAVSPDGSLCASGGK---DGVVLLWDLAEGKKLY-SLEAN-----SV-IHALCFSPNRYWLC 618 (694)
T ss_dssp ----------CCSSCEEEEEECTTSSEEEEEET---TSBCEEEETTTTEEEE-CCBCS-----SC-EEEEEECSSSSEEE
T ss_pred ----------CCCCCEEEEEEeCCCCEEEEEeC---CCeEEEEECCCCceEE-EecCC-----Cc-EEEEEEcCCCcEEE
Confidence 00000001111124554433332 3568889988765322 11111 11 1133333 444433
Q ss_pred EEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCC--------------CCCcceeeEEEEEeCCcEEEEEEcCcEEEEEE
Q 046902 267 FRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTP--------------TRSFLFLRPLGYSRNGVKLLLEVRREKLVWFD 332 (393)
Q Consensus 267 ~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~--------------~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 332 (393)
. ..+. .+.||-++. ...+..+..... ....-...-+.++++|..|+-...++.+..||
T Consensus 619 ~-~~~~-~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~ 690 (694)
T 3dm0_A 619 A-ATEH-GIKIWDLES------KSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWG 690 (694)
T ss_dssp E-EETT-EEEEEETTT------TEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred E-EcCC-CEEEEECCC------CCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEe
Confidence 3 3333 789997753 122222221100 00000133467778888888777777899998
Q ss_pred CC
Q 046902 333 LE 334 (393)
Q Consensus 333 ~~ 334 (393)
+.
T Consensus 691 i~ 692 (694)
T 3dm0_A 691 IG 692 (694)
T ss_dssp C-
T ss_pred cc
Confidence 75
No 171
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=68.37 E-value=56 Score=27.95 Aligned_cols=158 Identities=11% Similarity=0.038 Sum_probs=82.6
Q ss_pred EEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccC
Q 046902 141 YGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPK 220 (393)
Q Consensus 141 ~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~ 220 (393)
-+..+++..+ +++.+.. ....+..|+..++.-+... .+. . ...-...-+|. +|++..
T Consensus 16 Egp~w~~~~~--~l~~~d~------~~~~i~~~d~~~~~~~~~~-~~~----------~---~~~i~~~~dG~-l~v~~~ 72 (297)
T 3g4e_A 16 ESPVWEEVSN--SLLFVDI------PAKKVCRWDSFTKQVQRVT-MDA----------P---VSSVALRQSGG-YVATIG 72 (297)
T ss_dssp EEEEEETTTT--EEEEEET------TTTEEEEEETTTCCEEEEE-CSS----------C---EEEEEEBTTSS-EEEEET
T ss_pred cCCeEECCCC--EEEEEEC------CCCEEEEEECCCCcEEEEe-CCC----------c---eEEEEECCCCC-EEEEEC
Confidence 4566776544 3333321 2346788888877554332 110 0 01111224677 455443
Q ss_pred CCCCcEEEEEECCCceeeeec-CCCcccccCCceeEEEEE-eCCeEEEEEEcC--------CCeEEEEEEeecCCCCCeE
Q 046902 221 SSTRSVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVGS-LEGCLCVFRFYN--------LVYVDMWMMKEHAVKESWT 290 (393)
Q Consensus 221 ~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~~-~~G~L~~~~~~~--------~~~~~iW~l~~~~~~~~W~ 290 (393)
..|..||..+.++..+. .+.... .... ..+.. -+|+|++..... ...-.||.++..+ .-.
T Consensus 73 ----~~l~~~d~~~g~~~~~~~~~~~~~--~~~~-~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g---~~~ 142 (297)
T 3g4e_A 73 ----TKFCALNWKEQSAVVLATVDNDKK--NNRF-NDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH---HVK 142 (297)
T ss_dssp ----TEEEEEETTTTEEEEEEECCTTCS--SEEE-EEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS---CEE
T ss_pred ----CeEEEEECCCCcEEEEEecCCCCC--CCCC-CCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC---CEE
Confidence 57999999998887764 222211 1111 13333 378988876432 1246788887422 222
Q ss_pred EEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEEEC--CCCcEE
Q 046902 291 KLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDL--ETNSLR 339 (393)
Q Consensus 291 ~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd~--~t~~~~ 339 (393)
.+. .. .....-+++.++|+.+++... ...+..||. +++++.
T Consensus 143 ~~~--~~------~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~ 186 (297)
T 3g4e_A 143 KYF--DQ------VDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQIS 186 (297)
T ss_dssp EEE--EE------ESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEE
T ss_pred EEe--ec------cccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCccc
Confidence 211 10 012334667778877777643 356888875 566553
No 172
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=68.36 E-value=65 Score=28.69 Aligned_cols=72 Identities=10% Similarity=0.062 Sum_probs=43.4
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCC--CCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcE
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTP--TRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 338 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~--~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~ 338 (393)
+|...+.+..+ ..+.||-+... ..+..+..... ........-+++.++|..++....++.+..||..+++.
T Consensus 260 ~~~~l~s~s~D-~~i~lwd~~~~------~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 260 DGQRFGTGSDD-GTCRLFDMRTG------HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp TSSEEEEECSS-SCEEEEETTTT------EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred CCCeEEEEcCC-CeEEEEECCCC------cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce
Confidence 66665555544 48999987631 12222222111 11112345678888988887777777899999988765
Q ss_pred E
Q 046902 339 R 339 (393)
Q Consensus 339 ~ 339 (393)
.
T Consensus 333 ~ 333 (380)
T 3iz6_a 333 V 333 (380)
T ss_dssp E
T ss_pred E
Confidence 4
No 173
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=67.72 E-value=44 Score=28.99 Aligned_cols=70 Identities=17% Similarity=0.173 Sum_probs=45.5
Q ss_pred CeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEEE
Q 046902 262 GCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 262 G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v 341 (393)
|.+.+.+..+. .+.||.++..+ ......+.... ....-+.+.++|+.|+....++.+..||+++++...+
T Consensus 54 g~~l~~~~~dg-~i~iw~~~~~~----~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGSWAN-DVRCWEVQDSG----QTIPKAQQMHT-----GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEETTS-EEEEEEECTTS----CEEEEEEEECS-----SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEEECCCC-cEEEEEcCCCC----ceeEEEecccc-----CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee
Confidence 56666665544 89999998522 22223332211 1244567777888888777777899999999987665
No 174
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=67.65 E-value=65 Score=28.42 Aligned_cols=67 Identities=9% Similarity=0.048 Sum_probs=43.6
Q ss_pred CCeEEEEEEcCCCe-EEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCc
Q 046902 261 EGCLCVFRFYNLVY-VDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNS 337 (393)
Q Consensus 261 ~G~L~~~~~~~~~~-~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~ 337 (393)
+|.+.+.+..+. . +.||-++. ...+..+..... .....-+++.++|..++....++.+..||+++..
T Consensus 206 ~g~~l~s~s~d~-~~v~iwd~~~------~~~~~~~~~g~h---~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 206 KSDMVATCSQDG-TIIRVFKTED------GVLVREFRRGLD---RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TSSEEEEEETTC-SEEEEEETTT------CCEEEEEECTTC---CSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCEEEEEeCCC-CEEEEEECCC------CcEEEEEEcCCC---CCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 777666666554 6 99998763 234455542100 0124557788888877777777789999998764
No 175
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=67.35 E-value=64 Score=31.13 Aligned_cols=121 Identities=15% Similarity=0.129 Sum_probs=62.5
Q ss_pred CceeEeCceEEEeccCCCCCcEEEEEEC-CC--ceeeeecCCCccccc----CCceeEEEEEeCCeEEEEEEcCCCeEEE
Q 046902 205 GYGVLAGGALHWVSPKSSTRSVIVAFDL-VA--EEFYQLPLPDSVNVS----YANVHVDVGSLEGCLCVFRFYNLVYVDM 277 (393)
Q Consensus 205 ~~~v~~~G~lyw~~~~~~~~~~il~fD~-~~--e~~~~i~lP~~~~~~----~~~~~~~l~~~~G~L~~~~~~~~~~~~i 277 (393)
..++..+|.+|..... ...|.++|. .+ +.|+. .++...... .......++..+|++++..... .|
T Consensus 56 ~~P~v~~g~vyv~~~~---~~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg----~l 127 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF---PNNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANG----HL 127 (571)
T ss_dssp SCCEEETTEEEEECST---TTCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTS----EE
T ss_pred cccEEECCEEEEEeCC---CCEEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeCCC----EE
Confidence 4568899999988651 257999998 65 45654 222211000 0001123445677777664321 23
Q ss_pred EEEeecCCCCCeEEEEEeeCCCCCCCcc-eeeEEEEEeCCcEEEEEEc------CcEEEEEECCCCcEEE
Q 046902 278 WMMKEHAVKESWTKLFSVQEPTPTRSFL-FLRPLGYSRNGVKLLLEVR------REKLVWFDLETNSLRT 340 (393)
Q Consensus 278 W~l~~~~~~~~W~~~~~i~~~~~~~~~~-~~~~~~~~~~g~~i~l~~~------~~~l~~yd~~t~~~~~ 340 (393)
..++-...+..|+... .. ...... ...|+.. ++.|++... +..++.||.+|++...
T Consensus 128 ~alD~~tG~~~W~~~~--~~--~~~~~~~~~~P~v~---~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 128 LALDAKTGKINWEVEV--CD--PKVGSTLTQAPFVA---KDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp EEEETTTCCEEEEEEC--CC--GGGTCBCCSCCEEE---TTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred EEEECCCCCEEEEecC--CC--CCccceeccCCEEE---CCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 4455221134575431 11 000001 1234432 357777654 4579999999988654
No 176
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=66.95 E-value=1.3e+02 Score=31.71 Aligned_cols=195 Identities=15% Similarity=0.150 Sum_probs=97.1
Q ss_pred eeec-eEEEeeCCceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEe
Q 046902 98 SCNG-LIALCNSVQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSL 175 (393)
Q Consensus 98 s~~G-Ll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss 175 (393)
+.+| +|.....+..+.|||..|++... +... .....++.+.|.. .+ ++. .. ....+.||+.
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h--------~~~v~~~~~s~~~-~~-l~s-~~------~d~~v~vwd~ 686 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAETGEKLLDIKAH--------EDEVLCCAFSSDD-SY-IAT-CS------ADKKVKIWDS 686 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCC--------SSCEEEEEECTTS-SE-EEE-EE------TTSEEEEEET
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEEEEeccC--------CCCEEEEEEecCC-CE-EEE-Ee------CCCeEEEEEC
Confidence 3445 34333456789999999987543 3221 2234456666643 23 222 22 2346899999
Q ss_pred CCCCeEEccccCcccccccccccccccccCceeEe----CceEEEeccCCCCCcEEEEEECCCceeeee-cCCCcccccC
Q 046902 176 KTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA----GGALHWVSPKSSTRSVIVAFDLVAEEFYQL-PLPDSVNVSY 250 (393)
Q Consensus 176 ~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~----~G~lyw~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~ 250 (393)
.++.-... +. .+. ..-..+.. ++.+...+.. ...|..+|+.+...... ....
T Consensus 687 ~~~~~~~~--~~----------~~~--~~v~~~~~~~~~~~~~l~sg~~---d~~v~vwd~~~~~~~~~~~~h~------ 743 (1249)
T 3sfz_A 687 ATGKLVHT--YD----------EHS--EQVNCCHFTNKSNHLLLATGSN---DFFLKLWDLNQKECRNTMFGHT------ 743 (1249)
T ss_dssp TTCCEEEE--EE----------CCS--SCEEEEEECSSSSCCEEEEEET---TSCEEEEETTSSSEEEEECCCS------
T ss_pred CCCceEEE--Ec----------CCC--CcEEEEEEecCCCceEEEEEeC---CCeEEEEECCCcchhheecCCC------
Confidence 88753321 11 000 00011111 2222222222 35688899887764432 2111
Q ss_pred CceeEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCC--------CcceeeEEEEEeCCcEEEE
Q 046902 251 ANVHVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTR--------SFLFLRPLGYSRNGVKLLL 321 (393)
Q Consensus 251 ~~~~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~--------~~~~~~~~~~~~~g~~i~l 321 (393)
.... .+.. -+|...+.+..+. .+.+|-+... .....+....... ......-+++.++|..++.
T Consensus 744 ~~v~-~~~~sp~~~~l~s~s~dg-~v~vwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~ 815 (1249)
T 3sfz_A 744 NSVN-HCRFSPDDELLASCSADG-TLRLWDVRSA------NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIV 815 (1249)
T ss_dssp SCEE-EEEECSSTTEEEEEESSS-EEEEEEGGGT------EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEE
T ss_pred CCEE-EEEEecCCCEEEEEECCC-eEEEEeCCCC------cccceecccccccccCCccccccceEEEEEECCCCCEEEE
Confidence 1111 2222 2666655555444 8999987642 1222222211100 0002233456678887777
Q ss_pred EEcCcEEEEEECCCCcEEEE
Q 046902 322 EVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 322 ~~~~~~l~~yd~~t~~~~~v 341 (393)
... +.+..||+.++.....
T Consensus 816 ~~~-~~v~~~d~~~~~~~~~ 834 (1249)
T 3sfz_A 816 AAK-NKVLLFDIHTSGLLAE 834 (1249)
T ss_dssp EET-TEEEEEETTTCCEEEE
T ss_pred EcC-CcEEEEEecCCCceeE
Confidence 764 5699999998875544
No 177
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=66.93 E-value=12 Score=27.84 Aligned_cols=41 Identities=10% Similarity=0.165 Sum_probs=30.1
Q ss_pred CceEEEEecccc-ceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEE
Q 046902 109 VQELALFNPSTR-KLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVL 158 (393)
Q Consensus 109 ~~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 158 (393)
...+++.||.|+ .|.. ... ....+.+.+|+..+.|+|+.+.
T Consensus 10 rA~V~~~D~~tk~~W~p--~g~-------~~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 10 RAHVFQIDPNTKKNWVP--TSK-------HAVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEEECTTTSCSEEE--SCS-------SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcCCCCCceEe--CCC-------CceEEEEEEcCCCCEEEEEEcc
Confidence 357899999996 8853 322 1245678889998999999854
No 178
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=66.78 E-value=61 Score=27.77 Aligned_cols=63 Identities=13% Similarity=0.082 Sum_probs=38.0
Q ss_pred EEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEE
Q 046902 266 VFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 339 (393)
Q Consensus 266 ~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~ 339 (393)
++....+..+.+|-++. ...+..+.... ....-+++.++|..++....++.+..||+.+.+..
T Consensus 188 ~~s~~~d~~i~i~d~~~------~~~~~~~~~h~-----~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLAN------CKLKTNHIGHT-----GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL 250 (340)
T ss_dssp EEEEETTSCEEEEETTT------TEEEEEECCCS-----SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred EEEEcCCCEEEEEECCC------CceeeEecCCC-----CcEEEEEECCCCCEEEEEeCCCeEEEEEeccCcee
Confidence 33333344889997653 22333333211 12344677788887777777778999999987644
No 179
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=66.26 E-value=71 Score=28.36 Aligned_cols=211 Identities=9% Similarity=0.027 Sum_probs=109.1
Q ss_pred eeeceEEEeeC-CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeC
Q 046902 98 SCNGLIALCNS-VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLK 176 (393)
Q Consensus 98 s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~ 176 (393)
..+|.|...+. ...+..+++.++....+.... .. ...++.+|+..+. ++.... ....+++++..
T Consensus 82 ~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~--~~-----~p~glavd~~~g~--ly~~d~------~~~~I~~~~~d 146 (349)
T 3v64_C 82 HRRELVFWSDVTLDRILRANLNGSNVEEVVSTG--LE-----SPGGLAVDWVHDK--LYWTDS------GTSRIEVANLD 146 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECSS--CS-----CCCEEEEETTTTE--EEEEET------TTTEEEEEETT
T ss_pred ccccEEEEEeccCCceEEEecCCCCceEEEeCC--CC-----CccEEEEecCCCe--EEEEcC------CCCeEEEEcCC
Confidence 45788877763 457888999887655443322 11 1246777876543 322221 23467788776
Q ss_pred CCCeEEccccCcccccccccccccccccCceeE---eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCce
Q 046902 177 TNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL---AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANV 253 (393)
Q Consensus 177 t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~---~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~ 253 (393)
...-+.+.... . ....++. .+|.+||.... ....|..+|+....-..+ ...... .
T Consensus 147 G~~~~~l~~~~------------l--~~P~~iavdp~~g~ly~td~~--~~~~I~r~~~dG~~~~~~-~~~~~~---~-- 204 (349)
T 3v64_C 147 GAHRKVLLWQS------------L--EKPRAIALHPMEGTIYWTDWG--NTPRIEASSMDGSGRRII-ADTHLF---W-- 204 (349)
T ss_dssp SCSCEEEECTT------------C--SCEEEEEEETTTTEEEEEECS--SSCEEEEEETTSCSCEES-CCSSCS---C--
T ss_pred CCceEEEEeCC------------C--CCcceEEEecCcCeEEEeccC--CCCEEEEEeCCCCCcEEE-EECCCC---C--
Confidence 54323221100 0 1122333 36899998644 136899999876443332 111111 1
Q ss_pred eEEEEE--eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEE
Q 046902 254 HVDVGS--LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVW 330 (393)
Q Consensus 254 ~~~l~~--~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ 330 (393)
.-.|+. .+|+||++..... .|++.+-.+. .. ..+ +.. . ...|.++.-+++.||+... ...+..
T Consensus 205 PnGla~d~~~~~lY~aD~~~~---~I~~~~~dG~-~~-~~~--~~~-~------~~~P~giav~~~~ly~td~~~~~V~~ 270 (349)
T 3v64_C 205 PNGLTIDYAGRRMYWVDAKHH---VIERANLDGS-HR-KAV--ISQ-G------LPHPFAITVFEDSLYWTDWHTKSINS 270 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTT---EEEEEETTSC-SC-EEE--ECS-S------CSSEEEEEEETTEEEEEETTTTEEEE
T ss_pred cceEEEeCCCCEEEEEECCCC---EEEEEeCCCC-ce-EEE--EeC-C------CCCceEEEEECCEEEEecCCCCeEEE
Confidence 124444 4888998876433 4455553331 11 111 111 1 1345554434567777753 457999
Q ss_pred EECCCC-cEEEEEEecCCCC-eeeeEEEEecccc
Q 046902 331 FDLETN-SLRTVKIDTHGLD-FVDTEICMASLVP 362 (393)
Q Consensus 331 yd~~t~-~~~~v~~~~~~~~-~~~~~~y~~SL~~ 362 (393)
+|..++ ..+.|. .+.. -..+..|.++.-+
T Consensus 271 ~~~~~G~~~~~i~---~~~~~p~gi~v~~~~~qp 301 (349)
T 3v64_C 271 ANKFTGKNQEIIR---NKLHFPMDIHTLHPQRQP 301 (349)
T ss_dssp EETTTCCSCEEEE---CSCSCCCCEEEECGGGSC
T ss_pred EEccCCCccEEec---cCCCCCceEEEEccccCc
Confidence 995444 455553 2322 4456666666543
No 180
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=65.75 E-value=1.1e+02 Score=30.47 Aligned_cols=194 Identities=9% Similarity=0.055 Sum_probs=92.3
Q ss_pred eeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCC
Q 046902 99 CNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTN 178 (393)
Q Consensus 99 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~ 178 (393)
.+|-|.+... ..++++||.++++..++.... .... .....++..|+... +.+.. ....+..|+..++
T Consensus 459 ~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~-~~~~-~~~i~~i~~d~~g~----lWigt------~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 459 KNKKIWIGTH-AGVFVIDLASKKVIHHYDTSN-SQLL-ENFVRSIAQDSEGR----FWIGT------FGGGVGIYTPDMQ 525 (781)
T ss_dssp TTSEEEEEET-TEEEEEESSSSSCCEEECTTT-SSCS-CSCEEEEEECTTCC----EEEEE------SSSCEEEECTTCC
T ss_pred CCCCEEEEEC-CceEEEeCCCCeEEecccCcc-cccc-cceeEEEEEcCCCC----EEEEE------cCCCEEEEeCCCC
Confidence 3555555433 568888888887766543220 0010 12233444554322 23332 1124666888888
Q ss_pred CeEEccccCcccccccccccccccccCceeEe--CceEEEeccCCCCCcEE-EEEECCCceeeeecCCCcccccCCceeE
Q 046902 179 SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVI-VAFDLVAEEFYQLPLPDSVNVSYANVHV 255 (393)
Q Consensus 179 ~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~i-l~fD~~~e~~~~i~lP~~~~~~~~~~~~ 255 (393)
.++...... ......-.+++. +|.+ |++.. ..+ ..||..+++|..+....... .....
T Consensus 526 ~~~~~~~~~-----------~l~~~~i~~i~~d~~g~l-Wi~T~----~Glv~~~d~~~~~~~~~~~~~gl~--~~~i~- 586 (781)
T 3v9f_A 526 LVRKFNQYE-----------GFCSNTINQIYRSSKGQM-WLATG----EGLVCFPSARNFDYQVFQRKEGLP--NTHIR- 586 (781)
T ss_dssp EEEEECTTT-----------TCSCSCEEEEEECTTSCE-EEEET----TEEEEESCTTTCCCEEECGGGTCS--CCCCC-
T ss_pred eEEEccCCC-----------CCCCCeeEEEEECCCCCE-EEEEC----CCceEEECCCCCcEEEccccCCCC--CceEE-
Confidence 777654211 010011123333 4654 66543 356 99999999888765322221 11122
Q ss_pred EEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcce-eeEEEEEeCCcEEEEEEcCcEEEEEEC
Q 046902 256 DVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLF-LRPLGYSRNGVKLLLEVRREKLVWFDL 333 (393)
Q Consensus 256 ~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~-~~~~~~~~~g~~i~l~~~~~~l~~yd~ 333 (393)
.+.+. +|.|.+.... . |..++.. ...+. .+ ....-.+...+ ...+...++| .|++.... .+..+|+
T Consensus 587 ~i~~d~~g~lW~~t~~---G--l~~~~~~--~~~~~-~~--~~~dGl~~~~f~~~~~~~~~~G-~l~~g~~~-Gl~~f~p 654 (781)
T 3v9f_A 587 AISEDKNGNIWASTNT---G--ISCYITS--KKCFY-TY--DHSNNIPQGSFISGCVTKDHNG-LIYFGSIN-GLCFFNP 654 (781)
T ss_dssp EEEECSSSCEEEECSS---C--EEEEETT--TTEEE-EE--CGGGTCCSSCEEEEEEEECTTS-CEEEEETT-EEEEECS
T ss_pred EEEECCCCCEEEEcCC---c--eEEEECC--CCceE-Ee--cccCCccccccccCceEECCCC-EEEEECCC-ceEEECh
Confidence 34443 7888777532 2 2233321 12221 12 21111111111 1223333455 58887765 4999999
Q ss_pred CCC
Q 046902 334 ETN 336 (393)
Q Consensus 334 ~t~ 336 (393)
+.-
T Consensus 655 ~~~ 657 (781)
T 3v9f_A 655 DIA 657 (781)
T ss_dssp CCG
T ss_pred hhc
Confidence 863
No 181
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=65.69 E-value=67 Score=27.86 Aligned_cols=90 Identities=14% Similarity=0.144 Sum_probs=51.2
Q ss_pred cEEEEEECCCceeee-ecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCC
Q 046902 225 SVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTR 302 (393)
Q Consensus 225 ~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~ 302 (393)
..|..+|+.+..... +.... .. -..+.-. +|...+....+. .+.||-++. ...+.++....
T Consensus 228 g~i~iwd~~~~~~~~~~~~h~------~~-v~~~~~sp~~~~l~s~s~D~-~v~iwd~~~------~~~~~~~~~h~--- 290 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGTLSGHA------SW-VLNVAFCPDDTHFVSSSSDK-SVKVWDVGT------RTCVHTFFDHQ--- 290 (321)
T ss_dssp SCEEEEETTTCCEEEEECCCS------SC-EEEEEECTTSSEEEEEETTS-CEEEEETTT------TEEEEEECCCS---
T ss_pred CeEEEEECCCcceeEEEcCCC------Cc-eEEEEECCCCCEEEEEeCCC-cEEEEeCCC------CEEEEEEcCCC---
Confidence 568899998765433 22111 11 1133332 666655555444 899997753 23444443211
Q ss_pred CcceeeEEEEEeCCcEEEEEEcCcEEEEEEC
Q 046902 303 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDL 333 (393)
Q Consensus 303 ~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~ 333 (393)
....-+.+.++|..|+-...++.+..||.
T Consensus 291 --~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 291 --DQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp --SCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred --CcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 12345677778887777777777888885
No 182
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=65.69 E-value=68 Score=27.93 Aligned_cols=183 Identities=7% Similarity=0.005 Sum_probs=92.5
Q ss_pred CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCC---C-eEEcc
Q 046902 109 VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTN---S-WRRIS 184 (393)
Q Consensus 109 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~---~-W~~~~ 184 (393)
...+.+.++.+++...+-+.. ....++.+|+..+ +|+.... ....+..++..+. + -+.+.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~--------~~p~g~~~d~~~~--~ly~~D~------~~~~I~~~~~~g~~~~~~~~~~~ 72 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNL--------RNVVALDTEVASN--RIYWSDL------SQRMICSTQLDRAHGVSSYDTVI 72 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSC--------SSEEEEEEETTTT--EEEEEET------TTTEEEEEEC--------CEEEE
T ss_pred CCeEEEEECCCcceEehhcCC--------CceEEEEEEeCCC--EEEEEEC------CCCcEEEEECCCCCCCcccEEEE
Confidence 345777787777654432211 1246788887655 3333321 2346677776651 2 12111
Q ss_pred ccCcccccccccccccccccCceeE---eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE--
Q 046902 185 NLPRFLRDFYDYLYHSLFRKGYGVL---AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS-- 259 (393)
Q Consensus 185 ~~p~~~~~~~~~~~~~~~~~~~~v~---~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~-- 259 (393)
+ ... ....++. .+|.+||.-.. ...|.++|+....-..+- ..... . ...++.
T Consensus 73 --~----------~~~--~~p~glavd~~~~~ly~~d~~---~~~I~~~~~~g~~~~~~~-~~~~~---~--P~~iavdp 129 (316)
T 1ijq_A 73 --S----------RDI--QAPDGLAVDWIHSNIYWTDSV---LGTVSVADTKGVKRKTLF-RENGS---K--PRAIVVDP 129 (316)
T ss_dssp --C----------SSC--SCCCEEEEETTTTEEEEEETT---TTEEEEEETTSSSEEEEE-ECTTC---C--EEEEEEET
T ss_pred --e----------CCC--CCcCEEEEeecCCeEEEEECC---CCEEEEEeCCCCceEEEE-ECCCC---C--cceEEeCC
Confidence 1 000 1122343 47899998443 468999998765443331 11111 1 124444
Q ss_pred eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEEECCCCcE
Q 046902 260 LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSL 338 (393)
Q Consensus 260 ~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd~~t~~~ 338 (393)
.+|.||+..... .-.|++++-++. -.+. +.... .....-+++.++++.||+... ...+..+|+++...
T Consensus 130 ~~g~ly~~d~~~--~~~I~~~~~dG~---~~~~--~~~~~----~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~ 198 (316)
T 1ijq_A 130 VHGFMYWTDWGT--PAKIKKGGLNGV---DIYS--LVTEN----IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 198 (316)
T ss_dssp TTTEEEEEECSS--SCEEEEEETTSC---CEEE--EECSS----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCEEEEEccCC--CCeEEEEcCCCC---CeEE--EEECC----CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce
Confidence 478888876432 234666654331 1111 11111 112334556656677887754 34799999987666
Q ss_pred EEE
Q 046902 339 RTV 341 (393)
Q Consensus 339 ~~v 341 (393)
+.+
T Consensus 199 ~~~ 201 (316)
T 1ijq_A 199 KTI 201 (316)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=64.43 E-value=78 Score=28.15 Aligned_cols=69 Identities=10% Similarity=0.212 Sum_probs=45.3
Q ss_pred CCeEEEEEE-cC------CCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEEC
Q 046902 261 EGCLCVFRF-YN------LVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDL 333 (393)
Q Consensus 261 ~G~L~~~~~-~~------~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~ 333 (393)
++++|+... .. .....||+.+- ...+.+.+++... ..-+++.++|..++.... ..+..||+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~----~t~~~v~~i~~~~-------p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDT----KTKQRVARIPGRD-------ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEET----TTTEEEEEEECTT-------CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEEC----CCCcEEEEEecCC-------eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 467777654 11 11345666663 2346777887642 345788899988877665 67999999
Q ss_pred CCCcEEEE
Q 046902 334 ETNSLRTV 341 (393)
Q Consensus 334 ~t~~~~~v 341 (393)
+|++++.+
T Consensus 333 ~t~~l~~~ 340 (361)
T 2oiz_A 333 SQPEPKLL 340 (361)
T ss_dssp SSSSCEEE
T ss_pred CCCcceee
Confidence 99955555
No 184
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=63.19 E-value=1.3e+02 Score=30.36 Aligned_cols=111 Identities=9% Similarity=0.050 Sum_probs=63.0
Q ss_pred eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE--eCCeEEEEEEcCCCeEEEEEEeecCCCC
Q 046902 210 AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS--LEGCLCVFRFYNLVYVDMWMMKEHAVKE 287 (393)
Q Consensus 210 ~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~--~~G~L~~~~~~~~~~~~iW~l~~~~~~~ 287 (393)
.+|.|||.-.. ...|.++|+....-..+.. ... .. ...|++ .+|.||+...... -.||+..-.|. .
T Consensus 481 ~~~~LY~tD~~---~~~I~v~~ldG~~~~~l~~-~~l---~~--P~gIaVDp~~g~LYwtD~g~~--~~I~~~~~dG~-~ 548 (791)
T 3m0c_C 481 IHSNIYWTDSV---LGTVSVADTKGVKRKTLFR-ENG---SK--PRAIVVDPVHGFMYWTDWGTP--AKIKKGGLNGV-D 548 (791)
T ss_dssp TTTEEEEEETT---TTEEEEEETTSSSEEEEEE-CTT---CC--EEEEEEETTTTEEEEEECSSS--CEEEEEETTSC-C
T ss_pred cCCcEEEEecC---CCeEEEEeCCCCeEEEEEe-CCC---CC--cceEEEecCCCCEEEecCCCC--CeEEEEecCCC-c
Confidence 35799999543 4689999998655444321 111 11 124454 4788988874332 34666664332 1
Q ss_pred CeEEEEEeeCCCCCCCcceeeE--EEEEeCCcEEEEEEc-CcEEEEEECCCCcEEEEE
Q 046902 288 SWTKLFSVQEPTPTRSFLFLRP--LGYSRNGVKLLLEVR-REKLVWFDLETNSLRTVK 342 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~--~~~~~~g~~i~l~~~-~~~l~~yd~~t~~~~~v~ 342 (393)
. ..+.... +..| +++...++.||+... ..+|..+|+++...+.+.
T Consensus 549 --~--~~lv~~~------l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 549 --I--YSLVTEN------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp --E--EEEECSS------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred --e--EEEEeCC------CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 1 1111111 2334 455545677888753 347999999888776663
No 185
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=62.86 E-value=77 Score=27.58 Aligned_cols=212 Identities=12% Similarity=0.039 Sum_probs=104.6
Q ss_pred eeeceEEEeeC-CceEEEEeccc----cceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEE
Q 046902 98 SCNGLIALCNS-VQELALFNPST----RKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVE 171 (393)
Q Consensus 98 s~~GLl~~~~~-~~~~~V~NP~T----~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 171 (393)
..+|.|...+. ...++..++.+ ..... ++... . ...++.+|+..+. +..... ....++
T Consensus 39 ~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~---~-----~p~glavd~~~~~--ly~~d~------~~~~I~ 102 (316)
T 1ijq_A 39 VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI---Q-----APDGLAVDWIHSN--IYWTDS------VLGTVS 102 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEEC--------CEEEECSSC---S-----CCCEEEEETTTTE--EEEEET------TTTEEE
T ss_pred eCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC---C-----CcCEEEEeecCCe--EEEEEC------CCCEEE
Confidence 34677777763 45788888876 22222 22110 1 1136677765443 322221 234677
Q ss_pred EEEeCCCCeEEccccCcccccccccccccccccCceeE---eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccc
Q 046902 172 VYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL---AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNV 248 (393)
Q Consensus 172 Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~---~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~ 248 (393)
+++.....=+.+.... . ....++. .+|.+||.... ....|..+|+....-..+.. ....
T Consensus 103 ~~~~~g~~~~~~~~~~------------~--~~P~~iavdp~~g~ly~~d~~--~~~~I~~~~~dG~~~~~~~~-~~~~- 164 (316)
T 1ijq_A 103 VADTKGVKRKTLFREN------------G--SKPRAIVVDPVHGFMYWTDWG--TPAKIKKGGLNGVDIYSLVT-ENIQ- 164 (316)
T ss_dssp EEETTSSSEEEEEECT------------T--CCEEEEEEETTTTEEEEEECS--SSCEEEEEETTSCCEEEEEC-SSCS-
T ss_pred EEeCCCCceEEEEECC------------C--CCcceEEeCCCCCEEEEEccC--CCCeEEEEcCCCCCeEEEEE-CCCC-
Confidence 8887654322221100 0 1122333 37899998543 12589999987544433311 1111
Q ss_pred cCCceeEEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-C
Q 046902 249 SYANVHVDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-R 325 (393)
Q Consensus 249 ~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~ 325 (393)
. .-.|+.. +|+||++..... . |++.+-.+. .. ..+.... .. ...|.++.-+++.||+... .
T Consensus 165 --~--P~gla~d~~~~~lY~~D~~~~-~--I~~~d~dg~-~~-~~~~~~~-~~------~~~P~giav~~~~ly~~d~~~ 228 (316)
T 1ijq_A 165 --W--PNGITLDLLSGRLYWVDSKLH-S--ISSIDVNGG-NR-KTILEDE-KR------LAHPFSLAVFEDKVFWTDIIN 228 (316)
T ss_dssp --C--EEEEEEETTTTEEEEEETTTT-E--EEEEETTSC-SC-EEEEECT-TT------TSSEEEEEEETTEEEEEETTT
T ss_pred --C--ceEEEEeccCCEEEEEECCCC-e--EEEEecCCC-ce-EEEeecC-Cc------cCCcEEEEEECCEEEEEECCC
Confidence 1 1244443 788998875433 3 445553331 11 1111111 01 1345555444567777653 4
Q ss_pred cEEEEEECCCCc-EEEEEEecCCCC-eeeeEEEEecccc
Q 046902 326 EKLVWFDLETNS-LRTVKIDTHGLD-FVDTEICMASLVP 362 (393)
Q Consensus 326 ~~l~~yd~~t~~-~~~v~~~~~~~~-~~~~~~y~~SL~~ 362 (393)
.++..+|..+++ .+.+. .+.+ -..+.+|.++.-+
T Consensus 229 ~~V~~~~~~~g~~~~~i~---~~~~~p~~i~v~~~~~qp 264 (316)
T 1ijq_A 229 EAIFSANRLTGSDVNLLA---ENLLSPEDMVLFHNLTQP 264 (316)
T ss_dssp TEEEEEETTTCCCCEEEE---CSCSCCCCEEEESGGGSC
T ss_pred CeEEEEeCCCCcceEEEe---cCCCCceEEEEeccccCC
Confidence 579999997665 44442 3333 4556677776643
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=62.48 E-value=1.1e+02 Score=29.37 Aligned_cols=198 Identities=13% Similarity=0.047 Sum_probs=101.6
Q ss_pred eceEEEee-CCceEEEEecccccee-ccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 100 NGLIALCN-SVQELALFNPSTRKLK-TLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 100 ~GLl~~~~-~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
++++.+.. ....+.|.|+.|++.. .+|... ...++.++|..+ | ++... ....+.+|+..+
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~---------~p~~v~~SpDGr-~-lyv~~-------~dg~V~viD~~~ 227 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY---------AVHISRLSASGR-Y-LFVIG-------RDGKVNMIDLWM 227 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSS---------CEEEEEECTTSC-E-EEEEE-------TTSEEEEEETTS
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCC---------CccceEECCCCC-E-EEEEc-------CCCeEEEEECCC
Confidence 34554443 4568999999998755 455322 123566666543 3 22222 123688999852
Q ss_pred CCeEEccccCcccccccccccccccccCceeE-e-----CceEEEeccCCCCCcEEEEEECCCceee-eecCCCccccc-
Q 046902 178 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL-A-----GGALHWVSPKSSTRSVIVAFDLVAEEFY-QLPLPDSVNVS- 249 (393)
Q Consensus 178 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~-~-----~G~lyw~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~- 249 (393)
.+-+.+..++.. ....++. . +|+.-+.+.. ....+.++|..+.+-. .+++.......
T Consensus 228 ~t~~~v~~i~~G-------------~~P~~ia~s~~~~pDGk~l~v~n~--~~~~v~ViD~~t~~~~~~i~~~~~~~~~~ 292 (567)
T 1qks_A 228 KEPTTVAEIKIG-------------SEARSIETSKMEGWEDKYAIAGAY--WPPQYVIMDGETLEPKKIQSTRGMTYDEQ 292 (567)
T ss_dssp SSCCEEEEEECC-------------SEEEEEEECCSTTCTTTEEEEEEE--ETTEEEEEETTTCCEEEEEECCEECTTTC
T ss_pred CCCcEeEEEecC-------------CCCceeEEccccCCCCCEEEEEEc--cCCeEEEEECCCCcEEEEEeccccccccc
Confidence 222333333210 1111222 2 5754444433 2357889998775433 34443211000
Q ss_pred ----CCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc
Q 046902 250 ----YANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR 324 (393)
Q Consensus 250 ----~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~ 324 (393)
.... ..+... ++..+++...+. =.||+.+- . .....++..|.... +...+++.++|..++....
T Consensus 293 ~~~p~~rv-a~i~~s~~~~~~vv~~~~~--g~v~~vd~-~-~~~~~~v~~i~~~~------~~~d~~~~pdgr~~~va~~ 361 (567)
T 1qks_A 293 EYHPEPRV-AAILASHYRPEFIVNVKET--GKILLVDY-T-DLNNLKTTEISAER------FLHDGGLDGSHRYFITAAN 361 (567)
T ss_dssp CEESCCCE-EEEEECSSSSEEEEEETTT--TEEEEEET-T-CSSEEEEEEEECCS------SEEEEEECTTSCEEEEEEG
T ss_pred cccCCCce-EEEEEcCCCCEEEEEecCC--CeEEEEec-C-CCccceeeeeeccc------cccCceECCCCCEEEEEeC
Confidence 0011 122222 344555544332 24555552 2 23355666665432 3446778888887777653
Q ss_pred -CcEEEEEECCCCcEEEE
Q 046902 325 -REKLVWFDLETNSLRTV 341 (393)
Q Consensus 325 -~~~l~~yd~~t~~~~~v 341 (393)
++++..+|.+|+++...
T Consensus 362 ~sn~V~ViD~~t~kl~~~ 379 (567)
T 1qks_A 362 ARNKLVVIDTKEGKLVAI 379 (567)
T ss_dssp GGTEEEEEETTTTEEEEE
T ss_pred CCCeEEEEECCCCcEEEE
Confidence 45799999999986543
No 187
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=61.46 E-value=59 Score=28.59 Aligned_cols=74 Identities=11% Similarity=0.134 Sum_probs=40.3
Q ss_pred eeEe--CceEEEeccCC--CCCcEEEEEECCCce-eeeecCCCcccccCCceeEEEEEe--CCeEEEEEEc--CCCeEEE
Q 046902 207 GVLA--GGALHWVSPKS--STRSVIVAFDLVAEE-FYQLPLPDSVNVSYANVHVDVGSL--EGCLCVFRFY--NLVYVDM 277 (393)
Q Consensus 207 ~v~~--~G~lyw~~~~~--~~~~~il~fD~~~e~-~~~i~lP~~~~~~~~~~~~~l~~~--~G~L~~~~~~--~~~~~~i 277 (393)
++.+ +|.|||..... .....|+.||+.+.+ ...+.+|..... ...+.-.++.. +|.+++.... ....+.+
T Consensus 71 gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~-~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v 149 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITL-SNSFVNDLAVDLIHNFVYISDPAPDDKAALIR 149 (343)
T ss_dssp EEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSC-TTCCCCEEEEETTTTEEEEEECCSGGGCEEEE
T ss_pred EEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcc-cccccceEEEecCCCEEEEEcCccCCCCeEEE
Confidence 4544 48899874210 013589999999877 556777643221 11111244554 5677776641 2225555
Q ss_pred EEEe
Q 046902 278 WMMK 281 (393)
Q Consensus 278 W~l~ 281 (393)
|-++
T Consensus 150 ~d~~ 153 (343)
T 2qe8_A 150 VDLQ 153 (343)
T ss_dssp EETT
T ss_pred EECC
Confidence 5543
No 188
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=61.11 E-value=74 Score=26.76 Aligned_cols=95 Identities=13% Similarity=0.154 Sum_probs=53.0
Q ss_pred cEEEEEECCCceeee-ecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCC
Q 046902 225 SVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTR 302 (393)
Q Consensus 225 ~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~ 302 (393)
..|..+|+.+.+... +..... . -..+.-. +|.| +....+..+.||-++. . .....+....
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~~------~-i~~~~~~~~~~l--~~~~~dg~v~iwd~~~----~--~~~~~~~~~~--- 266 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHES------F-VYCIKLLPNGDI--VSCGEDRTVRIWSKEN----G--SLKQVITLPA--- 266 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCSS------C-EEEEEECTTSCE--EEEETTSEEEEECTTT----C--CEEEEEECSS---
T ss_pred CeEEEEECCchhhhhhhhcCCc------e-EEEEEEecCCCE--EEEecCCEEEEEECCC----C--ceeEEEeccC---
Confidence 579999998654332 332211 1 1233333 5543 3333344899997764 1 2333333321
Q ss_pred CcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEE
Q 046902 303 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 340 (393)
Q Consensus 303 ~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~ 340 (393)
....-+.+.++|. ++....++.+..||++++++..
T Consensus 267 --~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 267 --ISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp --SCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred --ceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 1234566777776 5556666779999999987543
No 189
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=60.92 E-value=98 Score=28.11 Aligned_cols=112 Identities=8% Similarity=0.022 Sum_probs=63.3
Q ss_pred eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE--eCCeEEEEEEcCCCeEEEEEEeecCCCC
Q 046902 210 AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS--LEGCLCVFRFYNLVYVDMWMMKEHAVKE 287 (393)
Q Consensus 210 ~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~--~~G~L~~~~~~~~~~~~iW~l~~~~~~~ 287 (393)
.+|.|||.-.. ...|.++|+....-..+-. .... . ...|++ .+|.||....... -.|++.+-++. .
T Consensus 169 ~~~~lY~~d~~---~~~I~~~~~~g~~~~~l~~-~~~~---~--P~~iavdp~~g~ly~td~~~~--~~I~~~~~dG~-~ 236 (400)
T 3p5b_L 169 IHSNIYWTDSV---LGTVSVADTKGVKRKTLFR-ENGS---K--PRAIVVDPVHGFMYWTDWGTP--AKIKKGGLNGV-D 236 (400)
T ss_dssp TTTEEEEEETT---TTEEEEECTTTCSEEEEEE-CSSC---C--EEEEEEETTTTEEEEEECSSS--CCEEEEETTSC-S
T ss_pred cCCceEEEECC---CCeEEEEeCCCCceEEEEe-CCCC---C--cceEEEecccCeEEEEeCCCC--CEEEEEeCCCC-c
Confidence 37999999543 4689999998665444321 1111 1 124444 4788888764322 24666664442 1
Q ss_pred CeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEEECCCCcEEEE
Q 046902 288 SWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTV 341 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd~~t~~~~~v 341 (393)
. + .+.... .....-+++.++++.||+... ...+..+|+++...+.+
T Consensus 237 ~--~--~~~~~~----l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 237 I--Y--SLVTEN----IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp C--E--EEECSS----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred c--E--EEEECC----CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 1 1 111111 112344566656778888753 35799999998776666
No 190
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=60.85 E-value=48 Score=32.81 Aligned_cols=122 Identities=17% Similarity=0.128 Sum_probs=62.1
Q ss_pred CceeEeCceEEEeccCCCCCcEEEEEECCCc--eeeee-cCCCcccc--cCCceeEEEEEeCCeEEEEEEcCCCeEEEEE
Q 046902 205 GYGVLAGGALHWVSPKSSTRSVIVAFDLVAE--EFYQL-PLPDSVNV--SYANVHVDVGSLEGCLCVFRFYNLVYVDMWM 279 (393)
Q Consensus 205 ~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e--~~~~i-~lP~~~~~--~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~ 279 (393)
..++..+|.+|..... ..|.++|..+. .|+.- ..+..... ..+.....++..+|+|++..... . |..
T Consensus 71 ~~P~v~~g~vyv~~~~----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg--~--l~a 142 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASW----SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDG--R--LIA 142 (677)
T ss_dssp CCCEEETTEEEEECGG----GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTS--E--EEE
T ss_pred eCCEEECCEEEEECCC----CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCC--E--EEE
Confidence 4468899999988654 57999998765 45542 22211000 00011123445677777664321 2 334
Q ss_pred EeecCCCCCeEEEEEeeCCCCCCCcc-eeeEEEEEeCCcEEEEEEc------CcEEEEEECCCCcEEE
Q 046902 280 MKEHAVKESWTKLFSVQEPTPTRSFL-FLRPLGYSRNGVKLLLEVR------REKLVWFDLETNSLRT 340 (393)
Q Consensus 280 l~~~~~~~~W~~~~~i~~~~~~~~~~-~~~~~~~~~~g~~i~l~~~------~~~l~~yd~~t~~~~~ 340 (393)
++-...+..|+.....+. ..... ...|+.. ++.|++... +..|+.||.+|++...
T Consensus 143 lD~~tG~~~W~~~~~~~~---~~~~~~~~~p~v~---~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 143 LDAATGKEVWHQNTFEGQ---KGSLTITGAPRVF---KGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp EETTTCCEEEEEETTTTC---CSSCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EECCCCCEEeeecCCcCc---CcCcccccCcEEE---CCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 442111345654211000 00001 1234332 457777643 3579999999988654
No 191
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=60.29 E-value=21 Score=26.15 Aligned_cols=43 Identities=9% Similarity=0.168 Sum_probs=31.0
Q ss_pred CceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEE
Q 046902 109 VQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVL 158 (393)
Q Consensus 109 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 158 (393)
...+++++|.|+.|.. ... ......+.+..|...+.|+|+...
T Consensus 10 ~A~V~~~d~~~~~W~p--~~~-----~~g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 10 RAAVMVYDDANKKWVP--AGG-----STGFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEEETTTTEEEE--GGG-----CCSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcCCCCceEE--CCC-----CCCceEEEEEEECCCCEEEEEEEE
Confidence 3568999999997754 322 113455788899888999998765
No 192
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=59.32 E-value=83 Score=26.79 Aligned_cols=111 Identities=20% Similarity=0.242 Sum_probs=57.3
Q ss_pred Cce-EEEeccCCCCCcEEEEEECCCceee-eecCCCcccccCCceeEEEEE-eCC-eEEEEEEc----------CCCeEE
Q 046902 211 GGA-LHWVSPKSSTRSVIVAFDLVAEEFY-QLPLPDSVNVSYANVHVDVGS-LEG-CLCVFRFY----------NLVYVD 276 (393)
Q Consensus 211 ~G~-lyw~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~~~~~~l~~-~~G-~L~~~~~~----------~~~~~~ 276 (393)
+|. +|..... ...|..+|+.+.+.. .+..+.......... .+.. -+| .|++.... ....+.
T Consensus 44 dg~~l~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~ 118 (337)
T 1pby_B 44 GGRIAYATVNK---SESLVKIDLVTGETLGRIDLSTPEERVKSLF--GAALSPDGKTLAIYESPVRLELTHFEVQPTRVA 118 (337)
T ss_dssp TSSEEEEEETT---TTEEEEEETTTCCEEEEEECCBTTEEEECTT--CEEECTTSSEEEEEEEEEEECSSCEEECCCEEE
T ss_pred CCCEEEEEeCC---CCeEEEEECCCCCeEeeEEcCCccccccccc--ceEECCCCCEEEEEecccccccccccccCceEE
Confidence 564 4444332 357999999876653 355543100000001 1222 255 45555321 123666
Q ss_pred EEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEE
Q 046902 277 MWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 340 (393)
Q Consensus 277 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~ 340 (393)
+|-++. . ..+..+.... ...-+.+.++|..+++. . ..+..||+++++...
T Consensus 119 v~d~~~----~--~~~~~~~~~~------~~~~~~~s~dg~~l~~~-~-~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 119 LYDAET----L--SRRKAFEAPR------QITMLAWARDGSKLYGL-G-RDLHVMDPEAGTLVE 168 (337)
T ss_dssp EEETTT----T--EEEEEEECCS------SCCCEEECTTSSCEEEE-S-SSEEEEETTTTEEEE
T ss_pred EEECCC----C--cEEEEEeCCC------CcceeEECCCCCEEEEe-C-CeEEEEECCCCcEee
Confidence 665532 1 2333344321 12345677888877776 3 459999999987653
No 193
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=59.22 E-value=85 Score=26.85 Aligned_cols=29 Identities=14% Similarity=0.122 Sum_probs=16.7
Q ss_pred CceEEEeccCCCCCcEEEEEECCCceeeeecCC
Q 046902 211 GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLP 243 (393)
Q Consensus 211 ~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP 243 (393)
+|.+|.-.. ...|.+||...+......++
T Consensus 147 ~g~l~vgt~----~~~l~~~d~~g~~~~~~~~~ 175 (330)
T 3hxj_A 147 DGTIYVGSN----DNYLYAINPDGTEKWRFKTN 175 (330)
T ss_dssp TSCEEEECT----TSEEEEECTTSCEEEEEECS
T ss_pred CCEEEEEcC----CCEEEEECCCCCEeEEEecC
Confidence 677655432 25799999984333333443
No 194
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=58.53 E-value=87 Score=26.79 Aligned_cols=182 Identities=12% Similarity=0.114 Sum_probs=97.4
Q ss_pred eceEEEeeC---CceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEe
Q 046902 100 NGLIALCNS---VQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSL 175 (393)
Q Consensus 100 ~GLl~~~~~---~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss 175 (393)
+|.|..+.. .+.+.+.+|.|++... ++.++ .....|+..+. + +|..+.. ....+.|||.
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-------~~FgeGit~~g--~--~ly~ltw------~~~~v~v~D~ 114 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-------RYFGEGISDWK--D--KIVGLTW------KNGLGFVWNI 114 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-------TCCEEEEEEET--T--EEEEEES------SSSEEEEEET
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-------ccceeEEEEeC--C--EEEEEEe------eCCEEEEEEC
Confidence 677766652 2479999999987543 43322 22233444442 2 5544431 3457899999
Q ss_pred CCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCce-eeeecCCCcccccCCcee
Q 046902 176 KTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEE-FYQLPLPDSVNVSYANVH 254 (393)
Q Consensus 176 ~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~-~~~i~lP~~~~~~~~~~~ 254 (393)
.+.+=.. .++ +. ...-++..+|...|++.. ...|..+|+++.+ -..|+....... ....+
T Consensus 115 ~t~~~~~--ti~----------~~---~eG~glt~dg~~L~~SdG---s~~i~~iDp~T~~v~~~I~V~~~g~~-~~~lN 175 (262)
T 3nol_A 115 RNLRQVR--SFN----------YD---GEGWGLTHNDQYLIMSDG---TPVLRFLDPESLTPVRTITVTAHGEE-LPELN 175 (262)
T ss_dssp TTCCEEE--EEE----------CS---SCCCCEEECSSCEEECCS---SSEEEEECTTTCSEEEEEECEETTEE-CCCEE
T ss_pred ccCcEEE--EEE----------CC---CCceEEecCCCEEEEECC---CCeEEEEcCCCCeEEEEEEeccCCcc-ccccc
Confidence 8875332 222 11 123456677776666542 4689999998744 445665421110 01111
Q ss_pred EEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCC-------cceeeEEEEEeCCcEEEEEEcC
Q 046902 255 VDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRS-------FLFLRPLGYSRNGVKLLLEVRR 325 (393)
Q Consensus 255 ~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~-------~~~~~~~~~~~~g~~i~l~~~~ 325 (393)
.|...+|+|++...... . |-+.+- .+=..+.+|++..+... .....-+++.++++.+|+..+.
T Consensus 176 -ELe~~~G~lyan~w~~~-~--I~vIDp----~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 176 -ELEWVDGEIFANVWQTN-K--IVRIDP----ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp -EEEEETTEEEEEETTSS-E--EEEECT----TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred -eeEEECCEEEEEEccCC-e--EEEEEC----CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 24445899886654333 3 333442 22345566666432211 1233456777777778877653
No 195
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=57.93 E-value=85 Score=26.47 Aligned_cols=67 Identities=13% Similarity=0.145 Sum_probs=39.2
Q ss_pred eeeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 98 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 98 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
|.+|+|... .+..+.|||+.|++...+-... .+.....++.+.+..+ +- +. +. ....+.+++.++
T Consensus 34 S~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~-----~~~~~V~~v~~~~~~~-~l-~s-gs------~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 34 SSGNVLAVA-LDNSVYLWSASSGDILQLLQME-----QPGEYISSVAWIKEGN-YL-AV-GT------SSAEVQLWDVQQ 98 (318)
T ss_dssp CTTSEEEEE-ETTEEEEEETTTCCEEEEEECC-----STTCCEEEEEECTTSS-EE-EE-EE------TTSEEEEEETTT
T ss_pred CCCCEEEEE-eCCEEEEEECCCCCEEEEEEec-----CCCCeEEEEEECCCCC-EE-EE-EE------CCCcEEEeecCC
Confidence 556766544 4678999999999876543322 1122344566666542 32 22 21 234688888887
Q ss_pred CC
Q 046902 178 NS 179 (393)
Q Consensus 178 ~~ 179 (393)
+.
T Consensus 99 ~~ 100 (318)
T 4ggc_A 99 QK 100 (318)
T ss_dssp TE
T ss_pred ce
Confidence 64
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=57.77 E-value=88 Score=26.59 Aligned_cols=120 Identities=11% Similarity=0.067 Sum_probs=63.1
Q ss_pred eEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCC
Q 046902 208 VLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKE 287 (393)
Q Consensus 208 v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~ 287 (393)
+.-+|.++. +.. ..|..||...+.-..+..|.... ....-...+|.+.++.... .-.|+.++..+ +.
T Consensus 44 ~~pdG~ilv-s~~----~~V~~~d~~G~~~W~~~~~~~~~-----~~~~~~~~dG~~lv~~~~~--~~~v~~vd~~G-k~ 110 (276)
T 3no2_A 44 ATKAGEILF-SYS----KGAKMITRDGRELWNIAAPAGCE-----MQTARILPDGNALVAWCGH--PSTILEVNMKG-EV 110 (276)
T ss_dssp ECTTSCEEE-ECB----SEEEEECTTSCEEEEEECCTTCE-----EEEEEECTTSCEEEEEEST--TEEEEEECTTS-CE
T ss_pred ECCCCCEEE-eCC----CCEEEECCCCCEEEEEcCCCCcc-----ccccEECCCCCEEEEecCC--CCEEEEEeCCC-CE
Confidence 334787776 322 47999999544434455553221 1111223478887776542 23556666433 33
Q ss_pred CeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEEEEE
Q 046902 288 SWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTVKI 343 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v~~ 343 (393)
.|+.. +... .........-+...++|+.|+....+.+++.||++.+.+-++..
T Consensus 111 l~~~~--~~~~-~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~ 163 (276)
T 3no2_A 111 LSKTE--FETG-IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKL 163 (276)
T ss_dssp EEEEE--ECCS-CSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEEC
T ss_pred EEEEe--ccCC-CCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEEC
Confidence 34432 2211 00111112223456688877666556789999999666555544
No 197
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=57.59 E-value=1.6e+02 Score=29.46 Aligned_cols=202 Identities=13% Similarity=0.138 Sum_probs=101.0
Q ss_pred eeceEEEeeCCceEEEEeccccceeccCCCCCC-C-CCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeC
Q 046902 99 CNGLIALCNSVQELALFNPSTRKLKTLPLPPCL-V-GFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLK 176 (393)
Q Consensus 99 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~-~-~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~ 176 (393)
.+|-|-+......+..+||.++++..++..... . ... .....++..|... +++.++. ....+..|+..
T Consensus 366 ~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~-~~~v~~i~~d~~g---~~lWigt------~~~Gl~~~d~~ 435 (795)
T 4a2l_A 366 KDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIG-SNNIKAVYVDEKK---SLVYIGT------HAGGLSILHRN 435 (795)
T ss_dssp TTSCEEEEESSSCEEEECTTTCCEEEECCC------CCS-CSCEEEEEEETTT---TEEEEEE------TTTEEEEEETT
T ss_pred CCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCC-CccEEEEEEcCCC---CEEEEEe------CcCceeEEeCC
Confidence 355555544444688889988887766532200 0 001 1233455555432 1122332 22467889988
Q ss_pred CCCeEEccccCcccccccccccccccccCceeEe--CceEEEeccCCCCCcEEEEEECCCceeeeecCC---CcccccCC
Q 046902 177 TNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLP---DSVNVSYA 251 (393)
Q Consensus 177 t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP---~~~~~~~~ 251 (393)
++.++....... ......-.++.. +|.+ |++.. ..|..||..+.+|..+... .... .
T Consensus 436 ~~~~~~~~~~~~----------~l~~~~v~~i~~d~~g~l-wigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~---~ 497 (795)
T 4a2l_A 436 SGQVENFNQRNS----------QLVNENVYAILPDGEGNL-WLGTL----SALVRFNPEQRSFTTIEKEKDGTPVV---S 497 (795)
T ss_dssp TCCEEEECTTTS----------CCSCSCEEEEEECSSSCE-EEEES----SCEEEEETTTTEEEECCBCTTCCBCC---C
T ss_pred CCcEEEeecCCC----------CcCCCeeEEEEECCCCCE-EEEec----CceeEEeCCCCeEEEccccccccccC---C
Confidence 888776642110 000011112222 4554 55543 3699999999999877533 1111 1
Q ss_pred ceeEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEE--eCCcEEEEEEcCcEE
Q 046902 252 NVHVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYS--RNGVKLLLEVRREKL 328 (393)
Q Consensus 252 ~~~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~--~~g~~i~l~~~~~~l 328 (393)
..-..+.+ .+|.|.+... . .+..+..+. ..+ . +...... .......+.++. .+| .|.+.+.. .|
T Consensus 498 ~~i~~i~~d~~g~lWigt~--~-Gl~~~~~~~----~~~-~-~~~~~~~--~~l~~~~i~~i~~d~~g-~lWigT~~-Gl 564 (795)
T 4a2l_A 498 KQITTLFRDSHKRLWIGGE--E-GLSVFKQEG----LDI-Q-KASILPV--SNVTKLFTNCIYEASNG-IIWVGTRE-GF 564 (795)
T ss_dssp CCEEEEEECTTCCEEEEES--S-CEEEEEEET----TEE-E-ECCCSCS--CGGGGSCEEEEEECTTS-CEEEEESS-CE
T ss_pred ceEEEEEECCCCCEEEEeC--C-ceEEEeCCC----CeE-E-EecCCCC--CCCCCCeeEEEEECCCC-CEEEEeCC-Cc
Confidence 11223433 4778887764 2 444443332 234 1 1110000 011112233443 344 57877765 59
Q ss_pred EEEECCCCcEEEE
Q 046902 329 VWFDLETNSLRTV 341 (393)
Q Consensus 329 ~~yd~~t~~~~~v 341 (393)
+.||+++++++.+
T Consensus 565 ~~~d~~~~~~~~~ 577 (795)
T 4a2l_A 565 YCFNEKDKQIKRY 577 (795)
T ss_dssp EEEETTTTEEEEE
T ss_pred eeECCCCCcEEEe
Confidence 9999999988765
No 198
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=56.73 E-value=1e+02 Score=27.07 Aligned_cols=156 Identities=8% Similarity=-0.035 Sum_probs=81.8
Q ss_pred EEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEe---CceEEE
Q 046902 140 FYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHW 216 (393)
Q Consensus 140 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw 216 (393)
..++.+.+....+-+.+ . ....+.||+..++.....-... .+. ..-.++.. +|.+..
T Consensus 76 v~~~~~~~~~~~~l~s~-~-------~dg~i~iwd~~~~~~~~~~~~~----------~h~--~~v~~~~~~~~~~~~l~ 135 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVG-S-------KGGDIILWDYDVQNKTSFIQGM----------GPG--DAITGMKFNQFNTNQLF 135 (383)
T ss_dssp EEEEEECSSCTTEEEEE-E-------BTSCEEEEETTSTTCEEEECCC----------STT--CBEEEEEEETTEEEEEE
T ss_pred EEEEEECCCCCCEEEEE-c-------CCCeEEEEeCCCcccceeeecC----------CcC--CceeEEEeCCCCCCEEE
Confidence 44566666543333222 2 2346889999887765442211 000 11112222 233333
Q ss_pred eccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEE-EeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEe
Q 046902 217 VSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVG-SLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSV 295 (393)
Q Consensus 217 ~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~-~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i 295 (393)
.+.. ...|..+|+.+.....+....... .... .+. .-+|...+.+..+. .+.+|-++. . .+..+
T Consensus 136 s~~~---d~~i~iwd~~~~~~~~~~~~~~~~---~~v~-~~~~~~~~~~l~~~~~d~-~i~i~d~~~----~---~~~~~ 200 (383)
T 3ei3_B 136 VSSI---RGATTLRDFSGSVIQVFAKTDSWD---YWYC-CVDVSVSRQMLATGDSTG-RLLLLGLDG----H---EIFKE 200 (383)
T ss_dssp EEET---TTEEEEEETTSCEEEEEECCCCSS---CCEE-EEEEETTTTEEEEEETTS-EEEEEETTS----C---EEEEE
T ss_pred EEeC---CCEEEEEECCCCceEEEeccCCCC---CCeE-EEEECCCCCEEEEECCCC-CEEEEECCC----C---EEEEe
Confidence 3322 357999999987777665443221 1111 222 23666665555444 999998731 1 22333
Q ss_pred eCCCCCCCcceeeEEEEEeCCc-EEEEEEcCcEEEEEECCC
Q 046902 296 QEPTPTRSFLFLRPLGYSRNGV-KLLLEVRREKLVWFDLET 335 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~g~-~i~l~~~~~~l~~yd~~t 335 (393)
.... ....-+.+.+++. .++....+..+..||+.+
T Consensus 201 ~~h~-----~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 201 KLHK-----AKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp ECSS-----SCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred ccCC-----CcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 3211 1244566777776 666666667899999987
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=56.49 E-value=1.6e+02 Score=29.16 Aligned_cols=145 Identities=17% Similarity=0.068 Sum_probs=83.4
Q ss_pred ccEEEEEEeCCC--C-eEEccccCcccccccccccccccccCceeE-eCceEEEeccCCCCCcEEEEEECCC--ceeeee
Q 046902 167 DVEVEVYSLKTN--S-WRRISNLPRFLRDFYDYLYHSLFRKGYGVL-AGGALHWVSPKSSTRSVIVAFDLVA--EEFYQL 240 (393)
Q Consensus 167 ~~~~~Vyss~t~--~-W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~-~~G~lyw~~~~~~~~~~il~fD~~~--e~~~~i 240 (393)
...+.+++..++ . |+.+..-.. .....+. -++.+|+.+........|..+|+.+ +.|..+
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~--------------~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l 358 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLK--------------AQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTV 358 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSS--------------SCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCC--------------ceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEE
Confidence 457788888776 6 887743210 0011122 4567777765433356899999987 577765
Q ss_pred cCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEE
Q 046902 241 PLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLL 320 (393)
Q Consensus 241 ~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~ 320 (393)
- |... .. ...+...++.|.+....+. ...||+++-.+ . ....+..+. ......+++.++++.|+
T Consensus 359 ~-~~~~----~~-l~~~~~~~~~lv~~~~~dg-~~~l~~~~~~g--~---~~~~l~~~~----~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 359 V-PESK----DN-LESVGIAGNRLFASYIHDA-KSQVLAFDLDG--K---PAGAVSLPG----IGSASGLSGRPGDRHAY 422 (741)
T ss_dssp E-CCCS----SE-EEEEEEEBTEEEEEEEETT-EEEEEEEETTS--C---EEEECBCSS----SCEEEEEECCBTCSCEE
T ss_pred e-cCCC----Ce-EEEEEEECCEEEEEEEECC-EEEEEEEeCCC--C---ceeeccCCC----CeEEEEeecCCCCCEEE
Confidence 3 3321 11 1133445888877766544 77889887422 1 334444321 01223344556777677
Q ss_pred EEEcC----cEEEEEECCCCcEEEE
Q 046902 321 LEVRR----EKLVWFDLETNSLRTV 341 (393)
Q Consensus 321 l~~~~----~~l~~yd~~t~~~~~v 341 (393)
+...+ ..++.||+.+++.+.+
T Consensus 423 ~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 423 LSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EEEEETTEEEEEEEEETTTTEEEEC
T ss_pred EEEcCCCCCCEEEEEECCCCcEEEE
Confidence 65432 3699999999876544
No 200
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=56.18 E-value=1.8e+02 Score=29.73 Aligned_cols=193 Identities=13% Similarity=0.099 Sum_probs=93.8
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
+|.....+..+.|||..+.+....... ......+.|.+ +. .++... ....+.+++..++.-.
T Consensus 31 ~lAsgs~Dg~I~lw~~~~~~~~~~~~~--------~~~V~~l~fsp--g~-~L~S~s-------~D~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 31 LLAIATVTGEVHIYGQQQVEVVIKLED--------RSAIKEMRFVK--GI-YLVVIN-------AKDTVYVLSLYSQKVL 92 (902)
T ss_dssp EEEEEETTSEEEEECSTTCEEEEECSS--------CCCEEEEEEET--TT-EEEEEE-------TTCEEEEEETTTCSEE
T ss_pred EEEEEeCCCEEEEEeCCCcEEEEEcCC--------CCCEEEEEEcC--CC-EEEEEE-------CcCeEEEEECCCCcEE
Confidence 333333456788888777654432111 12345677777 44 344433 2457888998876432
Q ss_pred EccccCcccccccccccccccccCceeE--eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCc------ccccCCce
Q 046902 182 RISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDS------VNVSYANV 253 (393)
Q Consensus 182 ~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~------~~~~~~~~ 253 (393)
..-..+ ..-.++. -+|..-..+.. ...|..+|+.+........|.. ... ....
T Consensus 93 ~~~~~~---------------~~V~~v~~sp~g~~l~sgs~---dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~-h~~~ 153 (902)
T 2oaj_A 93 TTVFVP---------------GKITSIDTDASLDWMLIGLQ---NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAA-RLSP 153 (902)
T ss_dssp EEEECS---------------SCEEEEECCTTCSEEEEEET---TSCEEEEETTTTEEEEEEECCHHHHHTCSSS-CCCC
T ss_pred EEEcCC---------------CCEEEEEECCCCCEEEEEcC---CCcEEEEECCCCccccceecccccccccccc-CCCC
Confidence 110000 0000111 12333333222 3568889998876543222110 000 0000
Q ss_pred eEEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCC----CC---------CCCcceeeEEEEEeCCcE
Q 046902 254 HVDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEP----TP---------TRSFLFLRPLGYSRNGVK 318 (393)
Q Consensus 254 ~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~----~~---------~~~~~~~~~~~~~~~g~~ 318 (393)
-..+.-. ++.+.++... +..+ ||-++. . ..+.++... .. ........-+.+.++|..
T Consensus 154 V~sl~~sp~~~~~l~~g~~-dg~v-lWd~~~----~--~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~ 225 (902)
T 2oaj_A 154 IVSIQWNPRDIGTVLISYE-YVTL-TYSLVE----N--EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH 225 (902)
T ss_dssp CCEEEEETTEEEEEEEECS-SCEE-EEETTT----T--EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE
T ss_pred eEEEEEccCCCCEEEEEeC-CCcE-EEECCC----C--ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE
Confidence 1123332 2344444443 4478 997763 1 222333221 00 000112445677888887
Q ss_pred EEEEEcCcEEEEEECCCCcEE
Q 046902 319 LLLEVRREKLVWFDLETNSLR 339 (393)
Q Consensus 319 i~l~~~~~~l~~yd~~t~~~~ 339 (393)
|+-...++.+..||+++++..
T Consensus 226 lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 226 IITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp EEEEETTCCEEEEETTTCCEE
T ss_pred EEEEECCCeEEEEECCCCcEE
Confidence 777777778999999887653
No 201
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=56.05 E-value=1.7e+02 Score=29.27 Aligned_cols=215 Identities=13% Similarity=0.109 Sum_probs=105.2
Q ss_pred EeeeeeceEEEeeCCceEEEEeccccceeccCCCCC-CCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEE
Q 046902 95 VLGSCNGLIALCNSVQELALFNPSTRKLKTLPLPPC-LVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVY 173 (393)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~-~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vy 173 (393)
+....+|-|.+......++.+||.++++..+..... ..... ......+..|.... +.+.. .. .+.+|
T Consensus 220 i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~-~~~i~~i~~d~~g~----lWigt------~~-Gl~~~ 287 (795)
T 4a2l_A 220 ILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSIS-SNYIRSLAMDSQNR----LWIGT------FN-DLNIY 287 (795)
T ss_dssp EEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCS-CSBEEEEEECTTSC----EEEEE------SS-CEEEE
T ss_pred EEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccC-CCeEEEEEEcCCCC----EEEEe------CC-hhheE
Confidence 334456766665444468999999988776654320 00111 22334455554322 33332 12 57788
Q ss_pred EeCCCCeEEccccCcccccccccccccccccCceeEe--CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcc-cccC
Q 046902 174 SLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSV-NVSY 250 (393)
Q Consensus 174 ss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~-~~~~ 250 (393)
+..++.+......+... .......-.+++. +|. .|++.. ...|..+|..+..|..+...... ....
T Consensus 288 ~~~~~~~~~~~~~~~~~-------~~l~~~~i~~i~~D~~g~-lWigt~---~~Gl~~~~~~~~~~~~~~~~~~~~~l~~ 356 (795)
T 4a2l_A 288 HEGTDSFASYSSNPVEN-------GSLSQRSVRSIFMDSQGG-MWLGTY---FGGLNYYHPIRNRFKNIRNIPYKNSLSD 356 (795)
T ss_dssp ETTTTEEEEECCCTTST-------TSCSSSCEEEEEECTTSC-EEEEES---SSCEEEECGGGGSSEEECCCTTSSSCSC
T ss_pred cCCCCeEEEEecCCCCC-------CCCCCCcEEEEEEeCCcC-EEEEEC---CCCeEEeCCCcccceEEcCCCCCCCCCC
Confidence 98888887764322000 0011111122332 355 466543 24689999998888876432211 0001
Q ss_pred CceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCC--C-CCCCcceeeEEEEEeCCcEEEEEEcCc
Q 046902 251 ANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEP--T-PTRSFLFLRPLGYSRNGVKLLLEVRRE 326 (393)
Q Consensus 251 ~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~--~-~~~~~~~~~~~~~~~~g~~i~l~~~~~ 326 (393)
... ..+.+. +|.|.+..... .+..| +.. ...+.... .... . ... .....-+....+|..|.+.+.+.
T Consensus 357 ~~V-~~i~~d~~g~lWiGt~~~--Gl~~~--~~~--~~~~~~~~-~~~~~~~~~l~-~~~v~~i~~d~~g~~lWigt~~~ 427 (795)
T 4a2l_A 357 NVV-SCIVEDKDKNLWIGTNDG--GLNLY--NPI--TQRFTSYT-LQEDESARGIG-SNNIKAVYVDEKKSLVYIGTHAG 427 (795)
T ss_dssp SSE-EEEEECTTSCEEEEESSS--CEEEE--CTT--TCCEEEEC-CC------CCS-CSCEEEEEEETTTTEEEEEETTT
T ss_pred Cee-EEEEECCCCCEEEEECCC--CeEEE--cCC--CCcEEEEe-cCCCCcccCCC-CccEEEEEEcCCCCEEEEEeCcC
Confidence 112 244443 67777654322 33332 211 23343321 1100 0 000 11122333344554378877656
Q ss_pred EEEEEECCCCcEEEE
Q 046902 327 KLVWFDLETNSLRTV 341 (393)
Q Consensus 327 ~l~~yd~~t~~~~~v 341 (393)
.|+.||+++++++.+
T Consensus 428 Gl~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 428 GLSILHRNSGQVENF 442 (795)
T ss_dssp EEEEEETTTCCEEEE
T ss_pred ceeEEeCCCCcEEEe
Confidence 799999999887765
No 202
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=55.92 E-value=99 Score=26.62 Aligned_cols=97 Identities=9% Similarity=-0.047 Sum_probs=53.2
Q ss_pred cEEEEEECCC-ce-eeeecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCC
Q 046902 225 SVIVAFDLVA-EE-FYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPT 301 (393)
Q Consensus 225 ~~il~fD~~~-e~-~~~i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~ 301 (393)
..|..+|+.+ .. ...+...... -..+.-. +|.+.++...+. .+.+|-++.. .....+....
T Consensus 197 g~i~i~d~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~------~~~~~~~~~~-- 260 (369)
T 3zwl_B 197 GKISKYDVSNNYEYVDSIDLHEKS-------ISDMQFSPDLTYFITSSRDT-NSFLVDVSTL------QVLKKYETDC-- 260 (369)
T ss_dssp SEEEEEETTTTTEEEEEEECCSSC-------EEEEEECTTSSEEEEEETTS-EEEEEETTTC------CEEEEEECSS--
T ss_pred CEEEEEECCCCcEeEEEEecCCCc-------eeEEEECCCCCEEEEecCCc-eEEEEECCCC------ceeeeecCCC--
Confidence 5799999987 23 2333322111 1123322 666666555444 8999987631 2223333211
Q ss_pred CCcceeeEEEEEeCCcEEEEEEcCc--------------EEEEEECCCCcEEEE
Q 046902 302 RSFLFLRPLGYSRNGVKLLLEVRRE--------------KLVWFDLETNSLRTV 341 (393)
Q Consensus 302 ~~~~~~~~~~~~~~g~~i~l~~~~~--------------~l~~yd~~t~~~~~v 341 (393)
....+.+.+++..++....+. .+..||..+.+....
T Consensus 261 ----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 310 (369)
T 3zwl_B 261 ----PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR 310 (369)
T ss_dssp ----CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEE
T ss_pred ----CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh
Confidence 234456667777666665443 688899988765443
No 203
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=55.50 E-value=1.3e+02 Score=27.74 Aligned_cols=115 Identities=14% Similarity=0.169 Sum_probs=60.7
Q ss_pred cCceeEeC-----ceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE-eCCeEEEEEEcCC-CeEE
Q 046902 204 KGYGVLAG-----GALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS-LEGCLCVFRFYNL-VYVD 276 (393)
Q Consensus 204 ~~~~v~~~-----G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~-~~~~ 276 (393)
...++.++ |.|||.-.. ..|..+|+.+.....+..+.. .. ..++. .+|.|++...... ..-.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~----~~I~~id~~~g~v~~~~~~~~-----~P--~giavd~dG~lyVad~~~~~~~~g 208 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR----DAFRHVDFVNQYVDIKTTNIG-----QC--ADVNFTLNGDMVVVDDQSSDTNTG 208 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT----SCEEEEETTTTEEEEECCCCS-----CE--EEEEECTTCCEEEEECCSCTTSEE
T ss_pred CCceEEEccccCCCEEEEEeCC----CCEEEEECCCCEEEEeecCCC-----Cc--cEEEECCCCCEEEEcCCCCcccce
Confidence 34466666 899998542 679999998888777643211 11 13333 3777877775321 1223
Q ss_pred EEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-cCcEEEEEECCCCcE
Q 046902 277 MWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFDLETNSL 338 (393)
Q Consensus 277 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~yd~~t~~~ 338 (393)
+..+...+ .|.....+.. + ....-+++.++++.||+.. ....++.||+++++.
T Consensus 209 v~~~~~~~---~~~~~~~~~~--~----~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 209 IYLFTRAS---GFTERLSLCN--A----RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp EEEECGGG---TTCCEEEEEE--C----SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred EEEEECCC---Ceeccccccc--c----CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 33333222 2321111211 0 0122356666233466654 335789999987776
No 204
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=55.49 E-value=1.6e+02 Score=28.85 Aligned_cols=192 Identities=9% Similarity=0.074 Sum_probs=95.5
Q ss_pred eEEEEeccc-cceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcc
Q 046902 111 ELALFNPST-RKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRF 189 (393)
Q Consensus 111 ~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~ 189 (393)
.++++|..+ ++...+.... ........+.+ |.. .+-++.... . ......+.+++..++..+.+......
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~-pDg-~~l~~~~~~--~-~~~~~~i~~~d~~~g~~~~~~~~~~~ 333 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGK-----EQDIYLARVNW-RDP-QHLSFQRQS--R-DQKKLDLVEVTLASNQQRVLAHETSP 333 (741)
T ss_dssp EEEEECSSTTCCCEEECCCS-----CSSEEEEEEEE-EET-TEEEEEEEE--T-TSSEEEEEEEETTTCCEEEEEEEECS
T ss_pred EEEEEECCCCCceEEecCCC-----CcceEEEEEEe-CCC-CEEEEEEec--c-cCCeEEEEEEECCCCceEEEEEcCCC
Confidence 788999999 8766654331 11222334555 433 333332221 1 12356788888888877655321100
Q ss_pred cccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEE--EEeCCe-EEE
Q 046902 190 LRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDV--GSLEGC-LCV 266 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l--~~~~G~-L~~ 266 (393)
............-+|.+++.+.. +....|..+|+... ...+. ... ... ..+ ..-+|+ |++
T Consensus 334 --------~~~~~~~~~~~spdg~~~~~~~~-~g~~~l~~~~~~~~-~~~l~--~~~----~~v-~~~~~~s~dg~~l~~ 396 (741)
T 2ecf_A 334 --------TWVPLHNSLRFLDDGSILWSSER-TGFQHLYRIDSKGK-AAALT--HGN----WSV-DELLAVDEKAGLAYF 396 (741)
T ss_dssp --------SCCCCCSCCEECTTSCEEEEECT-TSSCEEEEECSSSC-EEESC--CSS----SCE-EEEEEEETTTTEEEE
T ss_pred --------CcCCcCCceEECCCCeEEEEecC-CCccEEEEEcCCCC-eeeee--ecc----eEE-EeEeEEeCCCCEEEE
Confidence 00000011223347887776654 23457888887665 43332 211 111 122 233665 444
Q ss_pred EEEcCC-CeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC----cEEEEEECCCCcEEE
Q 046902 267 FRFYNL-VYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR----EKLVWFDLETNSLRT 340 (393)
Q Consensus 267 ~~~~~~-~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~----~~l~~yd~~t~~~~~ 340 (393)
....+. ..+.||.++-.+. ....+... .....+.+.++|..+++...+ ..++.+|.++++++.
T Consensus 397 ~~~~~~~~~~~l~~~~~~g~-----~~~~l~~~------~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~ 464 (741)
T 2ecf_A 397 RAGIESARESQIYAVPLQGG-----QPQRLSKA------PGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIAT 464 (741)
T ss_dssp EECSSCTTCBEEEEEETTCC-----CCEECCCS------CSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEEC
T ss_pred EEeCCCCceEEEEEEEcCCC-----CeeecccC------CCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEE
Confidence 443221 2788999874331 11222211 123456777888877776432 258888877665443
No 205
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=55.46 E-value=1e+02 Score=26.51 Aligned_cols=197 Identities=15% Similarity=0.133 Sum_probs=95.3
Q ss_pred eeceEEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 99 CNGLIALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 99 ~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
.+|-|.+.+ ...+++.++|.++....++... ...++.+++..+ ++.... . .....+..|+..+
T Consensus 41 ~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~---------~p~gia~~~dG~---l~vad~-~---~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 41 PDGTIFVTNHEVGEIVSITPDGNQQIHATVEG---------KVSGLAFTSNGD---LVATGW-N---ADSIPVVSLVKSD 104 (306)
T ss_dssp TTSCEEEEETTTTEEEEECTTCCEEEEEECSS---------EEEEEEECTTSC---EEEEEE-C---TTSCEEEEEECTT
T ss_pred CCCCEEEEeCCCCeEEEECCCCceEEEEeCCC---------CceeEEEcCCCc---EEEEec-c---CCcceEEEEcCCC
Confidence 366666665 4567999999876544333221 245677776543 222221 1 0123466778788
Q ss_pred CCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeee---c-----CCCccccc
Q 046902 178 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQL---P-----LPDSVNVS 249 (393)
Q Consensus 178 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i---~-----lP~~~~~~ 249 (393)
+..+.+...+. ........+..+|.+|.... ....|..+|..+...+.. . .+....
T Consensus 105 g~~~~~~~~~~-----------~~~~~g~~~~~~~~~~v~d~---~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~-- 168 (306)
T 2p4o_A 105 GTVETLLTLPD-----------AIFLNGITPLSDTQYLTADS---YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF-- 168 (306)
T ss_dssp SCEEEEEECTT-----------CSCEEEEEESSSSEEEEEET---TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS--
T ss_pred CeEEEEEeCCC-----------ccccCcccccCCCcEEEEEC---CCCeEEEEeCCCCcEeEEEECCccccccccCCC--
Confidence 87766544331 00001111223455665432 235899999876432211 0 111110
Q ss_pred CCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-cCcEE
Q 046902 250 YANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKL 328 (393)
Q Consensus 250 ~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l 328 (393)
. ..-.+...++.||+...... .+..+.++..+.-.......... ...-+++.++|. |++.. ....+
T Consensus 169 -~-~pngis~dg~~lyv~d~~~~-~I~~~~~~~~g~~~~~~~~~~~~---------~P~gi~vd~dG~-l~va~~~~~~V 235 (306)
T 2p4o_A 169 -P-AANGLKRFGNFLYVSNTEKM-LLLRIPVDSTDKPGEPEIFVEQT---------NIDDFAFDVEGN-LYGATHIYNSV 235 (306)
T ss_dssp -C-SEEEEEEETTEEEEEETTTT-EEEEEEBCTTSCBCCCEEEEESC---------CCSSEEEBTTCC-EEEECBTTCCE
T ss_pred -C-cCCCcCcCCCEEEEEeCCCC-EEEEEEeCCCCCCCccEEEeccC---------CCCCeEECCCCC-EEEEeCCCCeE
Confidence 1 11134444557887775433 54444443212111111111111 123467777875 56654 34579
Q ss_pred EEEECCCCcEEEE
Q 046902 329 VWFDLETNSLRTV 341 (393)
Q Consensus 329 ~~yd~~t~~~~~v 341 (393)
..||++. ++..+
T Consensus 236 ~~~~~~G-~~~~~ 247 (306)
T 2p4o_A 236 VRIAPDR-STTII 247 (306)
T ss_dssp EEECTTC-CEEEE
T ss_pred EEECCCC-CEEEE
Confidence 9999974 44433
No 206
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=54.63 E-value=1.3e+02 Score=27.60 Aligned_cols=110 Identities=9% Similarity=-0.009 Sum_probs=59.7
Q ss_pred CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-CCe-EEEEEEcCC--CeEEEEEEeecCCC
Q 046902 211 GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-EGC-LCVFRFYNL--VYVDMWMMKEHAVK 286 (393)
Q Consensus 211 ~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-~G~-L~~~~~~~~--~~~~iW~l~~~~~~ 286 (393)
+|.||+.... ..|..||+.+.....+..+ . ... ..++.. +|. |++...... ....+|...+ +
T Consensus 149 ~g~Lyv~d~~----~~I~~id~~~~~v~~~~~~-~----~~P--~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g-- 214 (430)
T 3tc9_A 149 HNHLYLVGEQ----HPTRLIDFEKEYVSTVYSG-L----SKV--RTICWTHEADSMIITNDQNNNDRPNNYILTRE-S-- 214 (430)
T ss_dssp EEEEEEEEBT----EEEEEEETTTTEEEEEECC-C----SCE--EEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-G--
T ss_pred CCeEEEEeCC----CcEEEEECCCCEEEEEecC-C----CCc--ceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-C--
Confidence 3888888543 6899999998877665321 1 111 233333 555 777775432 1333444332 2
Q ss_pred CCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-cCcEEEEEECCCCcEEEE
Q 046902 287 ESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFDLETNSLRTV 341 (393)
Q Consensus 287 ~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~yd~~t~~~~~v 341 (393)
.|.....+.. + ....-+++.++++.||+.. ...+++.||+++++...+
T Consensus 215 -~~~~~~~l~~--~----~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 215 -GFKVITELTK--G----QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp -TSCSEEEEEE--C----SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred -ceeeeeeecc--C----CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 2332122221 0 1233456777334466654 445799999998877433
No 207
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=54.39 E-value=1.1e+02 Score=30.34 Aligned_cols=123 Identities=15% Similarity=0.074 Sum_probs=62.1
Q ss_pred CceeEeCceEEEeccCCCCCcEEEEEECCC--ceeeee-cCCCcccc--cCCceeEEEEEeCCeEEEEEEcCCCeEEEEE
Q 046902 205 GYGVLAGGALHWVSPKSSTRSVIVAFDLVA--EEFYQL-PLPDSVNV--SYANVHVDVGSLEGCLCVFRFYNLVYVDMWM 279 (393)
Q Consensus 205 ~~~v~~~G~lyw~~~~~~~~~~il~fD~~~--e~~~~i-~lP~~~~~--~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~ 279 (393)
..+++.+|.+|..... ..|.++|..+ +.|+.- ..+..... ........++..+|+|++...+. . |..
T Consensus 64 ~~P~v~~g~vyv~~~~----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg--~--l~A 135 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPF----SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDG--R--LEA 135 (689)
T ss_dssp CCCEEETTEEEEECGG----GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTS--E--EEE
T ss_pred ecCEEECCEEEEEcCC----CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCC--E--EEE
Confidence 4467899999988654 5799999875 456642 22211100 00111123345677776654321 2 333
Q ss_pred EeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc------CcEEEEEECCCCcEEE
Q 046902 280 MKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR------REKLVWFDLETNSLRT 340 (393)
Q Consensus 280 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~yd~~t~~~~~ 340 (393)
++-...+..|......+.... ......|+.. + +.|++... +..++.||.+|++...
T Consensus 136 lDa~TG~~~W~~~~~~~~~~~--~~~~~sP~v~--~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 136 IDAKTGQRAWSVDTRADHKRS--YTITGAPRVV--N-GKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp EETTTCCEEEEEECCSCTTSC--CBCCSCCEEE--T-TEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EECCCCCEeeeecCcCCCCCC--ccccCCcEEE--C-CEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 442111345765321111100 0001234433 3 56777542 2479999999998654
No 208
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=54.36 E-value=1.5e+02 Score=29.14 Aligned_cols=121 Identities=12% Similarity=0.074 Sum_probs=61.5
Q ss_pred CceeEeCceEEEeccCCCCCcEEEEEECCCc--eeeee-cCCCcccc--cCCceeEEEEEeCCeEEEEEEcCCCeEEEEE
Q 046902 205 GYGVLAGGALHWVSPKSSTRSVIVAFDLVAE--EFYQL-PLPDSVNV--SYANVHVDVGSLEGCLCVFRFYNLVYVDMWM 279 (393)
Q Consensus 205 ~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e--~~~~i-~lP~~~~~--~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~ 279 (393)
..++..+|.+|..... ..|.++|..+. .|+.- ..+..... ........++..+|++++.... . . |..
T Consensus 60 ~~P~v~~g~vyv~~~~----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-g-~--l~a 131 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW----SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD-G-R--LIA 131 (668)
T ss_dssp CCCEEETTEEEEEEGG----GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT-S-E--EEE
T ss_pred cCCEEECCEEEEECCC----CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC-C-E--EEE
Confidence 4468899999988654 68999998754 56542 22211100 0000111234457777665422 1 2 334
Q ss_pred EeecCCCCCeEEEEEeeCCCCCCCcc-eeeEEEEEeCCcEEEEEEc------CcEEEEEECCCCcEEE
Q 046902 280 MKEHAVKESWTKLFSVQEPTPTRSFL-FLRPLGYSRNGVKLLLEVR------REKLVWFDLETNSLRT 340 (393)
Q Consensus 280 l~~~~~~~~W~~~~~i~~~~~~~~~~-~~~~~~~~~~g~~i~l~~~------~~~l~~yd~~t~~~~~ 340 (393)
++-...+..|+.... .. . .... ...|+.. ++.|++... +..++.||.+|++...
T Consensus 132 lD~~tG~~~W~~~~~-~~-~--~~~~~~~~P~v~---~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 132 LDAKTGKAIWSQQTT-DP-A--KPYSITGAPRVV---KGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp EETTTCCEEEEEECS-CT-T--SSCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EECCCCCEeeeeccC-CC-C--CcceecCCCEEE---CCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 442111345654321 10 0 0001 1234332 356777543 2479999999988654
No 209
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=54.32 E-value=24 Score=28.00 Aligned_cols=40 Identities=10% Similarity=0.185 Sum_probs=29.1
Q ss_pred ceEEEEecccc-ceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEE
Q 046902 110 QELALFNPSTR-KLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVL 158 (393)
Q Consensus 110 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 158 (393)
..+++.||.|+ .|.. ... ....+.+.+|...+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP--~g~-------~~~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVP--TSK-------HAVTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEE--SCS-------SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceee--cCC-------CCeEEEEEEcCCCCEEEEEEcc
Confidence 46899999997 8854 322 1135667789988999999864
No 210
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=53.94 E-value=1.2e+02 Score=27.17 Aligned_cols=139 Identities=11% Similarity=0.121 Sum_probs=66.3
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
+|+....+..+.|||..|++....-... ......+.+++..+ .++ .+. ....+.+|+..++.-
T Consensus 122 ~l~s~s~Dg~i~vwd~~~~~~~~~l~~h-------~~~V~~v~~~~~~~--~l~-sgs------~D~~i~iwd~~~~~~- 184 (410)
T 1vyh_C 122 VMVSASEDATIKVWDYETGDFERTLKGH-------TDSVQDISFDHSGK--LLA-SCS------ADMTIKLWDFQGFEC- 184 (410)
T ss_dssp EEEEEESSSCEEEEETTTCCCCEEECCC-------SSCEEEEEECTTSS--EEE-EEE------TTSCCCEEETTSSCE-
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecc-------CCcEEEEEEcCCCC--EEE-EEe------CCCeEEEEeCCCCce-
Confidence 3443445678999999988754321111 12234566666432 222 222 233567788765432
Q ss_pred EccccCcccccccccccccccccCceeEe--CceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEEEE
Q 046902 182 RISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVG 258 (393)
Q Consensus 182 ~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~ 258 (393)
+..+. .+. ..-.++.+ +|.....+.. ...|..+|+.+..... +.... .... .+.
T Consensus 185 -~~~~~----------~h~--~~V~~v~~~p~~~~l~s~s~---D~~i~~wd~~~~~~~~~~~~h~------~~v~-~~~ 241 (410)
T 1vyh_C 185 -IRTMH----------GHD--HNVSSVSIMPNGDHIVSASR---DKTIKMWEVQTGYCVKTFTGHR------EWVR-MVR 241 (410)
T ss_dssp -EECCC----------CCS--SCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECCS------SCEE-EEE
T ss_pred -eEEEc----------CCC--CCEEEEEEeCCCCEEEEEeC---CCeEEEEECCCCcEEEEEeCCC------ccEE-EEE
Confidence 11111 000 01111221 3443333222 3578899998765432 22111 1111 222
Q ss_pred E-eCCeEEEEEEcCCCeEEEEEEe
Q 046902 259 S-LEGCLCVFRFYNLVYVDMWMMK 281 (393)
Q Consensus 259 ~-~~G~L~~~~~~~~~~~~iW~l~ 281 (393)
. -+|.+.+.+..+. .+.||-+.
T Consensus 242 ~~~~g~~l~s~s~D~-~v~vwd~~ 264 (410)
T 1vyh_C 242 PNQDGTLIASCSNDQ-TVRVWVVA 264 (410)
T ss_dssp ECTTSSEEEEEETTS-CEEEEETT
T ss_pred ECCCCCEEEEEcCCC-eEEEEECC
Confidence 2 3667666666544 89999765
No 211
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=53.81 E-value=1.1e+02 Score=26.65 Aligned_cols=112 Identities=11% Similarity=0.042 Sum_probs=59.9
Q ss_pred eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE--eCCeEEEEEEcCCCeEEEEEEeecCCCC
Q 046902 210 AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS--LEGCLCVFRFYNLVYVDMWMMKEHAVKE 287 (393)
Q Consensus 210 ~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~--~~G~L~~~~~~~~~~~~iW~l~~~~~~~ 287 (393)
.+|.+||.-.. ...|.++|+....-..+.- .... .. ..+++ .+|.||+..... .-.|++++-++. .
T Consensus 89 ~~g~ly~~d~~---~~~I~~~~~dG~~~~~l~~-~~~~---~P--~giavdp~~g~ly~td~~~--~~~I~r~~~dG~-~ 156 (318)
T 3sov_A 89 LGEKLYWTDSE---TNRIEVSNLDGSLRKVLFW-QELD---QP--RAIALDPSSGFMYWTDWGE--VPKIERAGMDGS-S 156 (318)
T ss_dssp TTTEEEEEETT---TTEEEEEETTSCSCEEEEC-SSCS---SE--EEEEEEGGGTEEEEEECSS--SCEEEEEETTSC-S
T ss_pred CCCeEEEEECC---CCEEEEEECCCCcEEEEEe-CCCC---Cc--cEEEEeCCCCEEEEEecCC--CCEEEEEEcCCC-C
Confidence 47899998543 4689999987654333321 1111 11 23444 468888876432 234666664432 1
Q ss_pred CeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEEECCCCcEEEE
Q 046902 288 SWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTV 341 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd~~t~~~~~v 341 (393)
.+ .+-... .....-+++.++++.||+... ..++..+|+++...+.+
T Consensus 157 --~~--~~~~~~----l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 157 --RF--IIINSE----IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp --CE--EEECSS----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred --eE--EEEECC----CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE
Confidence 11 111111 112344566655667777653 34688888876655544
No 212
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=53.61 E-value=1.7e+02 Score=28.52 Aligned_cols=194 Identities=11% Similarity=0.061 Sum_probs=98.0
Q ss_pred ceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCC-CeEEccccCc
Q 046902 110 QELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTN-SWRRISNLPR 188 (393)
Q Consensus 110 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~-~W~~~~~~p~ 188 (393)
..++++|..+++...+.... ........+.+.|..+ + |+.... . .......+.+++..++ ..+.+.....
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~spdg~-~-l~~~~~-~-~~~~~~~v~~~d~~~g~~~~~~~~~~~ 305 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGE-----PKEKFLTNLSWSPDEN-I-LYVAEV-N-RAQNECKVNAYDAETGRFVRTLFVETD 305 (706)
T ss_dssp EEEEEEETTTTEEEECCCCS-----CTTCEEEEEEECTTSS-E-EEEEEE-C-TTSCEEEEEEEETTTCCEEEEEEEEEC
T ss_pred eEEEEEECCCCceEeeccCC-----CCceeEeeEEEECCCC-E-EEEEEe-C-CCCCeeEEEEEECCCCceeeEEEEccC
Confidence 46999999998876654322 1122334556666443 2 222221 1 1123457888888888 6665531110
Q ss_pred ccccccccccccccccCceeEe--CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-CCe-E
Q 046902 189 FLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-EGC-L 264 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-~G~-L 264 (393)
. ............- +|.+.+.+.. +....|..+|........+..... . ....+... +|+ |
T Consensus 306 ~--------~~~~~~~~~~~sp~~dg~~l~~~~~-~g~~~l~~~~~~~~~~~~l~~~~~-----~-v~~~~~~spdg~~l 370 (706)
T 2z3z_A 306 K--------HYVEPLHPLTFLPGSNNQFIWQSRR-DGWNHLYLYDTTGRLIRQVTKGEW-----E-VTNFAGFDPKGTRL 370 (706)
T ss_dssp S--------SCCCCCSCCEECTTCSSEEEEEECT-TSSCEEEEEETTSCEEEECCCSSS-----C-EEEEEEECTTSSEE
T ss_pred C--------CeECccCCceeecCCCCEEEEEEcc-CCccEEEEEECCCCEEEecCCCCe-----E-EEeeeEEcCCCCEE
Confidence 0 0000001111222 7887666543 234678888877666665532211 1 11112222 554 5
Q ss_pred EEEEEcCC-CeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcC----cEEEEEECCCCcE
Q 046902 265 CVFRFYNL-VYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR----EKLVWFDLETNSL 338 (393)
Q Consensus 265 ~~~~~~~~-~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~----~~l~~yd~~t~~~ 338 (393)
++...... ....||.++-.+ .... .+.... ...-+.+.++|..|++...+ ..++.+|+++++.
T Consensus 371 ~~~~~~~~~~~~~l~~~d~~~--~~~~---~l~~~~------~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~ 438 (706)
T 2z3z_A 371 YFESTEASPLERHFYCIDIKG--GKTK---DLTPES------GMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSH 438 (706)
T ss_dssp EEEESSSCTTCBEEEEEETTC--CCCE---ESCCSS------SEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEE
T ss_pred EEEecCCCCceEEEEEEEcCC--CCce---eccCCC------ceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeE
Confidence 44443322 157788877422 2222 222111 13346777888877776432 3599999999873
No 213
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=53.54 E-value=1.4e+02 Score=28.85 Aligned_cols=125 Identities=14% Similarity=0.129 Sum_probs=62.2
Q ss_pred CceeEeCceEEEeccCCCCCcEEEEEECCC--ceeeee-cCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEe
Q 046902 205 GYGVLAGGALHWVSPKSSTRSVIVAFDLVA--EEFYQL-PLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMK 281 (393)
Q Consensus 205 ~~~v~~~G~lyw~~~~~~~~~~il~fD~~~--e~~~~i-~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~ 281 (393)
..+++.+|.+|..... ..|.++|..+ +.|+.- ..|.............++..+|++++..... .|..|+
T Consensus 62 ~~P~v~~g~vyv~~~~----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg----~l~AlD 133 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY----SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDA----SVVALN 133 (582)
T ss_dssp CCCEEETTEEEEEETT----TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTT----EEEEEE
T ss_pred eccEEECCEEEEEcCC----CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCC----EEEEEE
Confidence 4468899999988653 2499999875 456653 2232110000000112344677776654321 234444
Q ss_pred ecCCCCCeEEEEEeeCCCCCCCcc-eeeEEEEEe--CCc-EEEEEEc------CcEEEEEECCCCcEEEE
Q 046902 282 EHAVKESWTKLFSVQEPTPTRSFL-FLRPLGYSR--NGV-KLLLEVR------REKLVWFDLETNSLRTV 341 (393)
Q Consensus 282 ~~~~~~~W~~~~~i~~~~~~~~~~-~~~~~~~~~--~g~-~i~l~~~------~~~l~~yd~~t~~~~~v 341 (393)
-...+..|+... .... ..+. ...|+.... +|. .|++... +..++.||++|++....
T Consensus 134 ~~TG~~~W~~~~--~~~~--~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 134 KNTGKVVWKKKF--ADHG--AGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp SSSCCEEEEEEC--SCGG--GTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred CCCCCEEeeecC--CCCC--cCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 221134565431 1100 0000 123544421 122 5666432 34799999999886653
No 214
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=53.53 E-value=1e+02 Score=26.05 Aligned_cols=116 Identities=11% Similarity=0.118 Sum_probs=58.4
Q ss_pred eCceEEEe-------ccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-C-CeEEEEEEcCCCeEEEEEE
Q 046902 210 AGGALHWV-------SPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-E-GCLCVFRFYNLVYVDMWMM 280 (393)
Q Consensus 210 ~~G~lyw~-------~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-~-G~L~~~~~~~~~~~~iW~l 280 (393)
-+|.+|+. ... ...|..+|+.+.++..+..|..... ... ...+... + |.|+++.... . |+++
T Consensus 27 ~~g~l~~~~~~~~~~~~~---~~~i~~~d~~~g~~~~~~~~~~~~~-~~~-~~~i~~~~~~g~l~v~~~~~--~--l~~~ 97 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKP---AGEILRIDLKTGKKTVICKPEVNGY-GGI-PAGCQCDRDANQLFVADMRL--G--LLVV 97 (314)
T ss_dssp TTSCEEEEETTCEETTEE---CCEEEEECTTTCCEEEEECCEETTE-ECC-EEEEEECSSSSEEEEEETTT--E--EEEE
T ss_pred CCCCEEEEEeccccCCCC---CCEEEEEeCCCCcEEEEEecccCCC-CCC-CceEEEecCCCcEEEEECCC--C--EEEE
Confidence 36888887 222 2579999998888877655421100 011 1234443 5 7888876422 3 4444
Q ss_pred eecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-C---------------cEEEEEECCCCcEEEE
Q 046902 281 KEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-R---------------EKLVWFDLETNSLRTV 341 (393)
Q Consensus 281 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~---------------~~l~~yd~~t~~~~~v 341 (393)
+..+ ...... ..... ........-+++.++|. +++... . ..++.||++ ++++.+
T Consensus 98 d~~g---~~~~~~-~~~~~-~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 98 QTDG---TFEEIA-KKDSE-GRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp ETTS---CEEECC-SBCTT-SCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred eCCC---CEEEEE-eccCC-CccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 4212 222110 11100 00111233466666765 555543 2 469999988 555543
No 215
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=53.40 E-value=1e+02 Score=26.07 Aligned_cols=36 Identities=8% Similarity=0.149 Sum_probs=26.1
Q ss_pred eeEEEEEeCCcEEEEEEcCcEEEEEECCCC-cEEEEE
Q 046902 307 LRPLGYSRNGVKLLLEVRREKLVWFDLETN-SLRTVK 342 (393)
Q Consensus 307 ~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~-~~~~v~ 342 (393)
..-+.+.++|..|+....++.+..||++++ +++.+.
T Consensus 309 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 344667778877777776778999999985 566653
No 216
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=52.53 E-value=1.4e+02 Score=27.21 Aligned_cols=205 Identities=10% Similarity=0.034 Sum_probs=97.8
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeE
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWR 181 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~ 181 (393)
+|+.......+++++..+++....+... .. ........+.+.|..+.-+.+.... ....+.+|+..++.-.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~--~~-~h~~~v~~~~~sp~~~~~~~l~s~~------~d~~i~vwd~~~~~~~ 233 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEP--IL-GHVSMLTDVHLIKDSDGHQFIITSD------RDEHIKISHYPQCFIV 233 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCC--SE-ECSSCEEEEEEEECTTSCEEEEEEE------TTSCEEEEEESCTTCE
T ss_pred EEEEEeCCCcEEEEecCCccccccccee--ee-cccCceEEEEEcCCCCCCcEEEEEc------CCCcEEEEECCCCcee
Confidence 3444444567888887766544211101 00 0122344566666511123333332 2346888998876532
Q ss_pred EccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceee-eecCCCcc--------------
Q 046902 182 RISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFY-QLPLPDSV-------------- 246 (393)
Q Consensus 182 ~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~-------------- 246 (393)
..- +. .+......-... +|.+...+.. ...|..+|+.+.+.. .+......
T Consensus 234 ~~~-~~----------~h~~~v~~~~~s-d~~~l~s~~~---d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (450)
T 2vdu_B 234 DKW-LF----------GHKHFVSSICCG-KDYLLLSAGG---DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRF 298 (450)
T ss_dssp EEE-CC----------CCSSCEEEEEEC-STTEEEEEES---SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----
T ss_pred eee-ec----------CCCCceEEEEEC-CCCEEEEEeC---CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccc
Confidence 210 00 000001111122 5655554433 358999999876542 23321100
Q ss_pred cc----cCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEE
Q 046902 247 NV----SYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLL 321 (393)
Q Consensus 247 ~~----~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l 321 (393)
.. .....-..+... +|...++.......+.||.+.+.. ...+..+..+.... ...-+++.++ .+++
T Consensus 299 ~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~-~~~l~~~~~~~~~~------~v~~~~~~~~--~~~v 369 (450)
T 2vdu_B 299 QNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQ-KGDLALKQIITFPY------NVISLSAHND--EFQV 369 (450)
T ss_dssp ------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSS-TTCEEEEEEEECSS------CEEEEEEETT--EEEE
T ss_pred cccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCC-CCceeeccEeccCC------ceEEEEecCC--cEEE
Confidence 00 000001122222 566666666445599999993211 34577777776531 2334556553 3454
Q ss_pred EEcCc----------EEEEEECCCCcEE
Q 046902 322 EVRRE----------KLVWFDLETNSLR 339 (393)
Q Consensus 322 ~~~~~----------~l~~yd~~t~~~~ 339 (393)
..... .++.++.++++++
T Consensus 370 ~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 370 TLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp EECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred EEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 43221 6888899988875
No 217
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=51.61 E-value=1.9e+02 Score=28.49 Aligned_cols=122 Identities=16% Similarity=0.057 Sum_probs=62.1
Q ss_pred eeceEEEeeCCceEEEEecccccee--ccCCCCCCCC-CC-CCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEE
Q 046902 99 CNGLIALCNSVQELALFNPSTRKLK--TLPLPPCLVG-FP-SAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYS 174 (393)
Q Consensus 99 ~~GLl~~~~~~~~~~V~NP~T~~~~--~LP~~~~~~~-~~-~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vys 174 (393)
.+|.|.+......++..|+.|++.+ .=+....... .. .....-+..++. =+|+... ....+..++
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~----~~v~v~~-------~dg~l~alD 144 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWK----GKVYVGA-------WDGRLIALD 144 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEET----TEEEEEC-------TTSEEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEEC----CEEEEEc-------CCCEEEEEE
Confidence 4788877765677899999998743 3222110000 00 000001122221 1343322 234567777
Q ss_pred eCCC--CeEEccc-cCcccccccccccccccccCceeEeCceEEEeccCC--CCCcEEEEEECCCc--eeeeec
Q 046902 175 LKTN--SWRRISN-LPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS--STRSVIVAFDLVAE--EFYQLP 241 (393)
Q Consensus 175 s~t~--~W~~~~~-~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~--~~~~~il~fD~~~e--~~~~i~ 241 (393)
..|+ .|+.-.. -+ .........++..+|.+|.-.... .....|.+||..+. .|+.-.
T Consensus 145 ~~tG~~~W~~~~~~~~----------~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 145 AATGKEVWHQNTFEGQ----------KGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp TTTCCEEEEEETTTTC----------CSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCCCCEEeeecCCcCc----------CcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 7776 4875422 11 001113345677899998765421 12468999999765 466543
No 218
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=51.47 E-value=1.2e+02 Score=26.22 Aligned_cols=72 Identities=6% Similarity=-0.007 Sum_probs=42.0
Q ss_pred EEEEEcCCCeEEEEEEeecCC--CCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEEE
Q 046902 265 CVFRFYNLVYVDMWMMKEHAV--KESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 265 ~~~~~~~~~~~~iW~l~~~~~--~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v 341 (393)
.++....+..+.||.+..... ...|.....+.... .....-+++.+ ++.|+....++.+..||..+++++.+
T Consensus 213 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~v~~s~-~~~l~s~~~dg~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVH----KRQVYNVAWGF-NGLIASVGADGVLAVYEEVDGEWKVF 286 (330)
T ss_dssp EEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCC----SSCEEEEEECT-TSCEEEEETTSCEEEEEEETTEEEEE
T ss_pred EEEEEeCCCeEEEEEecCCCccccceeEEeeeccccc----ccceEEEEEcC-CCEEEEEeCCCEEEEEEcCCCceEEE
Confidence 344433445999999875321 24576665554211 01233455554 44566666667799999998877655
No 219
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=51.12 E-value=1.2e+02 Score=26.13 Aligned_cols=198 Identities=13% Similarity=0.110 Sum_probs=96.3
Q ss_pred EEEeeCCceEEEEeccccceeccCCCCCCCCC-------------CCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccE
Q 046902 103 IALCNSVQELALFNPSTRKLKTLPLPPCLVGF-------------PSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVE 169 (393)
Q Consensus 103 l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~-------------~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 169 (393)
+........++.++|.+++...+..... ... .......++.+|+..+ +++... ....
T Consensus 33 l~v~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g--~l~v~d-------~~~~ 102 (322)
T 2fp8_A 33 FYTSVQDGRVIKYEGPNSGFVDFAYASP-YWNKAFCENSTDAEKRPLCGRTYDISYNLQNN--QLYIVD-------CYYH 102 (322)
T ss_dssp EEEECTTSEEEEECCTTTCEEEEEESCT-TCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT--EEEEEE-------TTTE
T ss_pred EEEEcCCCeEEEECCCCCceEEEecccc-cccccccccccchhccccCCCCceEEEcCCCC--cEEEEE-------CCCC
Confidence 4444345678888998876654432110 000 0011246777786333 233222 1123
Q ss_pred EEEEEeCCCCeEEccccCcccccccccccccccccCceeEe---CceEEEeccCC--------------CCCcEEEEEEC
Q 046902 170 VEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKS--------------STRSVIVAFDL 232 (393)
Q Consensus 170 ~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~--------------~~~~~il~fD~ 232 (393)
+.+|+..++..+.+..... .........+.+ +|.+|+..... .....|..||.
T Consensus 103 i~~~d~~~g~~~~~~~~~~----------~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 103 LSVVGSEGGHATQLATSVD----------GVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp EEEECTTCEECEEEESEET----------TEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred EEEEeCCCCEEEEecccCC----------CCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 6667766665554432110 000011123333 67887754221 12357999999
Q ss_pred CCceeeee----cCCCcccccCCceeEEEEEe-CCe-EEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcce
Q 046902 233 VAEEFYQL----PLPDSVNVSYANVHVDVGSL-EGC-LCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLF 306 (393)
Q Consensus 233 ~~e~~~~i----~lP~~~~~~~~~~~~~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 306 (393)
.+.+...+ ..|. .++.. +|+ |++...... .+.++.++... ....+.... .. .
T Consensus 173 ~~~~~~~~~~~~~~p~-----------gia~~~dg~~lyv~d~~~~-~I~~~~~~~~~-~~~~~~~~~--~~------g- 230 (322)
T 2fp8_A 173 STKETTLLLKELHVPG-----------GAEVSADSSFVLVAEFLSH-QIVKYWLEGPK-KGTAEVLVK--IP------N- 230 (322)
T ss_dssp TTTEEEEEEEEESCCC-----------EEEECTTSSEEEEEEGGGT-EEEEEESSSTT-TTCEEEEEE--CS------S-
T ss_pred CCCEEEEeccCCccCc-----------ceEECCCCCEEEEEeCCCC-eEEEEECCCCc-CCccceEEe--CC------C-
Confidence 87766543 2222 23333 554 666655433 44443333211 123333222 11 1
Q ss_pred eeEEEEEeCCcEEEEEEcC-----------cEEEEEECCCCcEEEEEE
Q 046902 307 LRPLGYSRNGVKLLLEVRR-----------EKLVWFDLETNSLRTVKI 343 (393)
Q Consensus 307 ~~~~~~~~~g~~i~l~~~~-----------~~l~~yd~~t~~~~~v~~ 343 (393)
..-+++.++|. |++.... ..++.||++.+.++.+..
T Consensus 231 P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~ 277 (322)
T 2fp8_A 231 PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPL 277 (322)
T ss_dssp EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEEC
T ss_pred CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEEEEEEC
Confidence 22355566775 6665432 469999999887777765
No 220
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=50.92 E-value=1.6e+02 Score=27.56 Aligned_cols=97 Identities=11% Similarity=0.110 Sum_probs=54.5
Q ss_pred cEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCC
Q 046902 225 SVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRS 303 (393)
Q Consensus 225 ~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 303 (393)
..|..+|...+....+...... -..+... +|++.+....+ ..+.+|-++. . .+..+....
T Consensus 407 ~~v~~~~~~~~~~~~~~~~~~~-------v~~~~~s~d~~~l~~~~~d-~~v~~w~~~~----~---~~~~~~~~~---- 467 (577)
T 2ymu_A 407 KTVKLWNRNGQLLQTLTGHSSS-------VWGVAFSPDDQTIASASDD-KTVKLWNRNG----Q---LLQTLTGHS---- 467 (577)
T ss_dssp SEEEEECTTCCEEEEEECCSSC-------EEEEEECTTSSEEEEEETT-SEEEEEETTS----C---EEEEEECCS----
T ss_pred CEEEEEeCCCCEEEEecCCCCC-------eEEEEECCCCCEEEEEcCC-CEEEEEECCC----C---EEEEEcCCC----
Confidence 4677788655544444322211 1123333 56655555444 4899997431 1 222333211
Q ss_pred cceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEEE
Q 046902 304 FLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 304 ~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v 341 (393)
....-+++.++|..|+....+..+..||..++..+.+
T Consensus 468 -~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~ 504 (577)
T 2ymu_A 468 -SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL 504 (577)
T ss_dssp -SCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEE
T ss_pred -CCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEE
Confidence 1234567788888777777777899999877766655
No 221
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=50.70 E-value=1.2e+02 Score=25.87 Aligned_cols=68 Identities=9% Similarity=0.134 Sum_probs=37.2
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEe--CCcEEEEEEcCcEEEEEECCCCcE
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSR--NGVKLLLEVRREKLVWFDLETNSL 338 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~--~g~~i~l~~~~~~l~~yd~~t~~~ 338 (393)
++.+.+.+..+. .+.||-+.... ... .+..... .....+.+.+ ++..++-...++.+..||+++++.
T Consensus 152 ~~~~l~sgs~D~-~v~iwd~~~~~--~~~----~~~~~~~----~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 152 DPSTFASGCLDR-TVKVWSLGQST--PNF----TLTTGQE----RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (304)
T ss_dssp CTTEEEEEETTS-EEEEEETTCSS--CSE----EEECCCT----TCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE
T ss_pred CCCEEEEEeCCC-eEEEEECCCCC--ccc----eeccCCc----CcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc
Confidence 456666555544 99999876421 111 1111110 0122334433 555666666677899999998764
Q ss_pred E
Q 046902 339 R 339 (393)
Q Consensus 339 ~ 339 (393)
.
T Consensus 221 ~ 221 (304)
T 2ynn_A 221 V 221 (304)
T ss_dssp E
T ss_pred c
Confidence 3
No 222
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=50.64 E-value=1.4e+02 Score=26.80 Aligned_cols=210 Identities=11% Similarity=0.165 Sum_probs=103.2
Q ss_pred eeeceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEe--
Q 046902 98 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSL-- 175 (393)
Q Consensus 98 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss-- 175 (393)
+..++++-......++|+|-.-++...||... . ...-+.-++.-..+..-++.+.+.. ...-.+.+|+.
T Consensus 38 p~~s~ii~t~k~~gL~Vydl~G~~l~~~~~g~----~--nnVD~r~~~~l~g~~~dla~as~R~---~~~n~l~vf~iDp 108 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSLDGKMLHSYNTGK----L--NNVDIRYDFPLNGKKVDIAAASNRS---EGKNTIEIYAIDG 108 (355)
T ss_dssp GGGCEEEEEETTTEEEEEETTSCEEEEECCSC----E--EEEEEEEEEEETTEEEEEEEEEECS---TTCCEEEEEEECT
T ss_pred CCccEEEEEcCCCCEEEEcCCCcEEEEccCCC----c--ccEEEecccccCCceEeEEEEeCCC---CCCCeEEEEEECC
Confidence 34566665555668999999556666676522 0 1111111221112112233333321 00356888955
Q ss_pred CCCCeEEcccc--CcccccccccccccccccCceeEe-----CceEEEeccCCCCCcEEEEEECC---C-----ceeeee
Q 046902 176 KTNSWRRISNL--PRFLRDFYDYLYHSLFRKGYGVLA-----GGALHWVSPKSSTRSVIVAFDLV---A-----EEFYQL 240 (393)
Q Consensus 176 ~t~~W~~~~~~--p~~~~~~~~~~~~~~~~~~~~v~~-----~G~lyw~~~~~~~~~~il~fD~~---~-----e~~~~i 240 (393)
.++.++.+... |.. .......++++ .|.+|.+....+ ..+..|++. + +.-+.+
T Consensus 109 ~~~~l~~i~~~~~pv~----------t~~~~pyGlcly~~~~~g~~yafV~~k~--G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 109 KNGTLQSMTDPDHPIA----------TAINEVYGFTLYHSQKTGKYYAMVTGKE--GEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp TTCCEEECSCTTSCEE----------CCCSSCCCEEEEECTTTCCEEEEEECSS--SEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCceeeccccccCcC----------CCCCCeeEEEEEecCCCCcEEEEEECCC--CeEEEEEEEeCCCCcccceEEEEe
Confidence 67889988653 310 00122334444 366666654422 355555552 2 233446
Q ss_pred cCCCcccccCCceeEEEEE--eCCeEEEEEEcCCCeEEEEEEeecCC-CCCeEEEEEeeCCCCCCCcceeeEEEEE--eC
Q 046902 241 PLPDSVNVSYANVHVDVGS--LEGCLCVFRFYNLVYVDMWMMKEHAV-KESWTKLFSVQEPTPTRSFLFLRPLGYS--RN 315 (393)
Q Consensus 241 ~lP~~~~~~~~~~~~~l~~--~~G~L~~~~~~~~~~~~iW~l~~~~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~~--~~ 315 (393)
.+|...+ .++. -.|.||+..-. ..||+++-... ...-..+..+....+... ..-+++. .+
T Consensus 177 ~lgsq~E--------gcvvDd~~g~Lyv~eEd----~GIw~~da~p~~~~~~~~v~~~~~g~l~aD---vEGLai~~~~~ 241 (355)
T 3amr_A 177 KMNSQTE--------GMAADDEYGRLYIAEED----EAIWKFSAEPDGGSNGTVIDRADGRHLTRD---IEGLTIYYAAD 241 (355)
T ss_dssp ECSSCEE--------EEEEETTTTEEEEEETT----TEEEEEECSTTSCSCCEEEEEBSSSSBCSC---EEEEEEEECGG
T ss_pred cCCCCcc--------eEEEcCCCCeEEEeccc----ceEEEEeCCcCCCCCceEEEEecCCccccC---cceEEEEecCC
Confidence 6665432 2233 25777776632 34999984211 123456666653322111 2223342 34
Q ss_pred Cc-EEEEEEc-CcEEEEEECC-CCc-EEEEEE
Q 046902 316 GV-KLLLEVR-REKLVWFDLE-TNS-LRTVKI 343 (393)
Q Consensus 316 g~-~i~l~~~-~~~l~~yd~~-t~~-~~~v~~ 343 (393)
|. .++.... +..+.+||.+ +.+ +..+.|
T Consensus 242 g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 242 GKGYLMASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp GCEEEEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred CCEEEEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 44 5666553 3479999997 444 344554
No 223
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=49.58 E-value=1.3e+02 Score=26.05 Aligned_cols=164 Identities=11% Similarity=0.092 Sum_probs=80.1
Q ss_pred eceEEEeeC--CceEEEEeccccceeccCCCCCCC--CCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEe
Q 046902 100 NGLIALCNS--VQELALFNPSTRKLKTLPLPPCLV--GFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSL 175 (393)
Q Consensus 100 ~GLl~~~~~--~~~~~V~NP~T~~~~~LP~~~~~~--~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss 175 (393)
+|.|++.+. ...+.++++-.+....+....... .........++.+|+..+. ++... .....+.+|+.
T Consensus 154 ~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~--l~v~d------~~~~~I~~~~~ 225 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQ--LCVAD------RENGRIQCFKT 225 (329)
T ss_dssp TCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTE--EEEEE------TTTTEEEEEET
T ss_pred CCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCE--EEEEE------CCCCEEEEEEC
Confidence 788877763 568999996554444443211000 0001223467888876443 22222 13457899999
Q ss_pred CCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeE
Q 046902 176 KTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHV 255 (393)
Q Consensus 176 ~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~ 255 (393)
.++.....-..+..... .+.........+..+|.+|.. ......|..+|+.+.+....--+.... ... ..
T Consensus 226 ~~G~~~~~~~~~~~~~~----~~~~~~~pg~~~~~~g~~~v~---~~~~~~v~~~~~~~g~~~~~~~~~~~~--~~~-p~ 295 (329)
T 3fvz_A 226 DTKEFVREIKHASFGRN----VFAISYIPGFLFAVNGKPYFG---DQEPVQGFVMNFSSGEIIDVFKPVRKH--FDM-PH 295 (329)
T ss_dssp TTCCEEEEECCTTTTTC----EEEEEEETTEEEEEECCCCTT---CSCCCCEEEEETTTCCEEEEECCSSSC--CSS-EE
T ss_pred CCCcEEEEEeccccCCC----cceeeecCCEEEEeCCCEEec---cCCCcEEEEEEcCCCeEEEEEcCCCCc--cCC-ee
Confidence 87766433211100000 011111111122334443322 223457999998877665532221111 011 12
Q ss_pred EEEE-eCCeEEEEEEcCCCeEEEEEEee
Q 046902 256 DVGS-LEGCLCVFRFYNLVYVDMWMMKE 282 (393)
Q Consensus 256 ~l~~-~~G~L~~~~~~~~~~~~iW~l~~ 282 (393)
.++. -+|.|++...... .+.+|.++.
T Consensus 296 ~ia~~~dG~lyvad~~~~-~I~~~~~~~ 322 (329)
T 3fvz_A 296 DIVASEDGTVYIGDAHTN-TVWKFTLTE 322 (329)
T ss_dssp EEEECTTSEEEEEESSSC-CEEEEEEEE
T ss_pred EEEECCCCCEEEEECCCC-EEEEEeCCc
Confidence 3444 3778888776544 888888775
No 224
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=49.27 E-value=1.8e+02 Score=27.78 Aligned_cols=67 Identities=10% Similarity=0.062 Sum_probs=40.0
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcE
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 338 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~ 338 (393)
+|...++....+..+.||.+.. .....++.-.. ....-+.+.++|..++-...++.+..||..+++.
T Consensus 158 ~~~~~l~s~s~D~~v~lwd~~~------~~~~~~l~~H~-----~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 158 SRPFRIISGSDDNTVAIFEGPP------FKFKSTFGEHT-----KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK 224 (611)
T ss_dssp SSSCEEEEEETTSCEEEEETTT------BEEEEEECCCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCeEEEEEeCCCeEEEEECCC------CeEeeeecccc-----CceEEEEECCCCCEEEEEECCCcEEEEECCCCcE
Confidence 4544344444445899996432 33344443211 1245567788888777666677799999877654
No 225
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=48.18 E-value=1.6e+02 Score=26.65 Aligned_cols=157 Identities=10% Similarity=-0.012 Sum_probs=76.0
Q ss_pred EEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEe---CceEEE
Q 046902 140 FYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHW 216 (393)
Q Consensus 140 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw 216 (393)
..++.|+|..... ++.+. ..-.+.||+..++.-....... .+. ..-.++.+ +|.+..
T Consensus 122 V~~l~~~P~~~~~--lasGs------~dg~i~lWd~~~~~~~~~~~~~----------gH~--~~V~~l~f~p~~~~~l~ 181 (435)
T 4e54_B 122 ATSLAWHPTHPST--VAVGS------KGGDIMLWNFGIKDKPTFIKGI----------GAG--GSITGLKFNPLNTNQFY 181 (435)
T ss_dssp EEEEEECSSCTTC--EEEEE------TTSCEEEECSSCCSCCEEECCC----------SSS--CCCCEEEECSSCTTEEE
T ss_pred EEEEEEeCCCCCE--EEEEe------CCCEEEEEECCCCCceeEEEcc----------CCC--CCEEEEEEeCCCCCEEE
Confidence 4567788765443 33332 2345788888776533221111 000 11122332 344333
Q ss_pred eccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEe
Q 046902 217 VSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSV 295 (393)
Q Consensus 217 ~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i 295 (393)
.+.. ...|..+|+.++....+....... .. ...+.. -+|.+.+.+..+ ..+.+|-++. ... .++
T Consensus 182 s~s~---D~~v~iwd~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~l~~g~~d-g~i~~wd~~~---~~~----~~~ 246 (435)
T 4e54_B 182 ASSM---EGTTRLQDFKGNILRVFASSDTIN---IW-FCSLDVSASSRMVVTGDNV-GNVILLNMDG---KEL----WNL 246 (435)
T ss_dssp EECS---SSCEEEEETTSCEEEEEECCSSCS---CC-CCCEEEETTTTEEEEECSS-SBEEEEESSS---CBC----CCS
T ss_pred EEeC---CCEEEEeeccCCceeEEeccCCCC---cc-EEEEEECCCCCEEEEEeCC-CcEeeeccCc---cee----EEE
Confidence 3222 356889999988776654332221 10 112222 366666555444 4899998752 111 111
Q ss_pred eCCCCCCCcceeeEEEEEeCCcEEE-EEEcCcEEEEEECCCC
Q 046902 296 QEPTPTRSFLFLRPLGYSRNGVKLL-LEVRREKLVWFDLETN 336 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~g~~i~-l~~~~~~l~~yd~~t~ 336 (393)
.. ......-+.+.++++.++ ....++.+..||+.+.
T Consensus 247 ~~-----h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~ 283 (435)
T 4e54_B 247 RM-----HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQV 283 (435)
T ss_dssp BC-----CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTC
T ss_pred ec-----ccceEEeeeecCCCceEEEEecCcceeeEEecccc
Confidence 11 011233455666655444 3445556778887764
No 226
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=47.71 E-value=1.6e+02 Score=26.46 Aligned_cols=102 Identities=12% Similarity=0.095 Sum_probs=54.0
Q ss_pred CcEEEEEECCCceee-eecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCC
Q 046902 224 RSVIVAFDLVAEEFY-QLPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPT 301 (393)
Q Consensus 224 ~~~il~fD~~~e~~~-~i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~ 301 (393)
...|..+|+.+.+.. .+..|... .. -..+... +|.+.+.+..+. .+.||-++. ...+..+.....
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~h~----~~-v~~~~~s~~~~~l~s~~~dg-~i~iwd~~~------~~~~~~~~~~~~- 257 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSPRH----GA-VSSICIDEECCVLILGTTRG-IIDIWDIRF------NVLIRSWSFGDH- 257 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCGGG----CC-EEEEEECTTSCEEEEEETTS-CEEEEETTT------TEEEEEEBCTTC-
T ss_pred CCeEEEEeCCCCeeeEEEccCCCC----Cc-eEEEEECCCCCEEEEEcCCC-eEEEEEcCC------ccEEEEEecCCC-
Confidence 368999999876543 34443221 11 1133322 666666665544 899998763 133344432210
Q ss_pred CCcceeeEEEEE----eCCcEEEEEEcCcEEEEEECCCCcEEEE
Q 046902 302 RSFLFLRPLGYS----RNGVKLLLEVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 302 ~~~~~~~~~~~~----~~g~~i~l~~~~~~l~~yd~~t~~~~~v 341 (393)
....-+.+. +++..++....++.+..||+++++....
T Consensus 258 ---~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 258 ---APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp ---EEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEE
T ss_pred ---CceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 011122222 3444444444556799999998875544
No 227
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=47.36 E-value=1.4e+02 Score=25.85 Aligned_cols=107 Identities=7% Similarity=0.010 Sum_probs=58.7
Q ss_pred CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEE-EEeCCeEEEEEEcCCCeEEEEEEeecCCCCCe
Q 046902 211 GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDV-GSLEGCLCVFRFYNLVYVDMWMMKEHAVKESW 289 (393)
Q Consensus 211 ~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l-~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W 289 (393)
+|.+||.... ...|..+|+.+.+...+..|.... .+ ..-+|++.+.. .. . |++++.. .+..
T Consensus 60 ~~~l~~~d~~---~~~i~~~d~~~~~~~~~~~~~~v~--------~i~~~~dg~l~v~~--~~-g--l~~~d~~--~g~~ 121 (326)
T 2ghs_A 60 SGTAWWFNIL---ERELHELHLASGRKTVHALPFMGS--------ALAKISDSKQLIAS--DD-G--LFLRDTA--TGVL 121 (326)
T ss_dssp TTEEEEEEGG---GTEEEEEETTTTEEEEEECSSCEE--------EEEEEETTEEEEEE--TT-E--EEEEETT--TCCE
T ss_pred CCEEEEEECC---CCEEEEEECCCCcEEEEECCCcce--------EEEEeCCCeEEEEE--CC-C--EEEEECC--CCcE
Confidence 3789998644 357999999988877776653321 22 23478887765 22 3 5555531 2334
Q ss_pred EEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-------CcEEEEEECCCCcEEEE
Q 046902 290 TKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-------REKLVWFDLETNSLRTV 341 (393)
Q Consensus 290 ~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-------~~~l~~yd~~t~~~~~v 341 (393)
..+..... . .......-+.+.++|. +++... ...|+.|| +++++.+
T Consensus 122 ~~~~~~~~--~-~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 122 TLHAELES--D-LPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp EEEECSST--T-CTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred EEEeeCCC--C-CCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 43322111 0 0111233456667776 555432 24688898 5666554
No 228
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=47.16 E-value=9.4 Score=22.76 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=12.8
Q ss_pred CCCcHHHHHHHhccCCc
Q 046902 3 KKIPLDIITGIFCRQPV 19 (393)
Q Consensus 3 ~~LP~Dll~eIL~rLP~ 19 (393)
..||.||.+|||+--..
T Consensus 22 ~~LP~dIQ~Ells~~~~ 38 (48)
T 2kwv_A 22 KQLPADIQEEILSGKSR 38 (48)
T ss_dssp TTSCHHHHHHHTTCCCS
T ss_pred HHCcHHHHHHHHhcchH
Confidence 57888888888876543
No 229
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=45.98 E-value=1.5e+02 Score=25.71 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=22.8
Q ss_pred eeEEEEEeCCcEEEEEEcCcEEEEEECCCC
Q 046902 307 LRPLGYSRNGVKLLLEVRREKLVWFDLETN 336 (393)
Q Consensus 307 ~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~ 336 (393)
..-+++.++|..|+....++.+..||.++.
T Consensus 312 v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 312 CTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp EEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred eEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 345677888888887777778889987654
No 230
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=43.84 E-value=1.7e+02 Score=25.78 Aligned_cols=33 Identities=12% Similarity=0.218 Sum_probs=26.1
Q ss_pred eeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEE
Q 046902 307 LRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 339 (393)
Q Consensus 307 ~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~ 339 (393)
..-+++.++|..|.....++.+..||.++.+..
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCcEE
Confidence 445678899988887777778999999998743
No 231
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=43.79 E-value=43 Score=24.64 Aligned_cols=43 Identities=14% Similarity=0.292 Sum_probs=30.9
Q ss_pred ceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEE
Q 046902 110 QELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVL 158 (393)
Q Consensus 110 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 158 (393)
..+++++|.|+.|. |... .......+.+..|...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~--p~~~----g~~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 11 ATVMLYDDGNKRWL--PAGT----GPQAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp EECBEECTTTSSCC--BSSC----SCCCCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCcee--ECCC----CCCCccEEEEEEeCCCCEEEEEEEE
Confidence 46889999999975 4432 0013446788899989999998765
No 232
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=43.70 E-value=1.8e+02 Score=25.94 Aligned_cols=67 Identities=10% Similarity=0.077 Sum_probs=40.3
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCc-EEEEEEcCcEEEEEECCCCcEE
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGV-KLLLEVRREKLVWFDLETNSLR 339 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~-~i~l~~~~~~l~~yd~~t~~~~ 339 (393)
+|++.+.+..+. .+.||-+...+ .......... ...-+++++++. .++....++.+..||+.+++..
T Consensus 155 d~~~las~s~D~-tv~~Wd~~~~~-----~~~~~~~~~~------~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~ 222 (393)
T 4gq1_A 155 AEQVIASVGDDC-TLIIWRLTDEG-----PILAGYPLSS------PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSA 222 (393)
T ss_dssp EEEEEEEEETTS-EEEEEEEETTE-----EEEEEEECSS------CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC--
T ss_pred CCCEEEEEECCC-eEEEEECCCCc-----eeeeecCCCC------CcEEEEECCCCCceEEecCCCCEEEEEECCCCccc
Confidence 677777666655 99999987521 1222222221 133467777654 4444556678999999987643
No 233
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=43.06 E-value=1.5e+02 Score=25.12 Aligned_cols=110 Identities=15% Similarity=0.253 Sum_probs=54.2
Q ss_pred ceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcc
Q 046902 110 QELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRF 189 (393)
Q Consensus 110 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~ 189 (393)
..++.+||.+++...+. . .. ...++.+++..+ .++.... .........+.+|+..++..........
T Consensus 169 ~~v~~~d~~~g~~~~~~--~--~~-----~p~gl~~spdg~--~lyv~~~-~~~~~~~~~i~~~~~~~~~l~~~~~~~~- 235 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--D--LD-----HPNGLAFSPDEQ--TLYVSQT-PEQGHGSVEITAFAWRDGALHDRRHFAS- 235 (305)
T ss_dssp EEEEEECSSSCCCEEEE--E--ES-----SEEEEEECTTSS--EEEEEEC-CC---CCCEEEEEEEETTEEEEEEEEEC-
T ss_pred CeEEEEcCCCCcEEEEe--c--CC-----CCcceEEcCCCC--EEEEEec-CCcCCCCCEEEEEEecCCCccCCeEEEE-
Confidence 46788888887766554 2 11 123556666543 2222221 1000012467788876554221110000
Q ss_pred cccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCc
Q 046902 190 LRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDS 245 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~ 245 (393)
........-.+--+|. .|++.. ..|..||...+....+.+|..
T Consensus 236 --------~~~~~pdgi~~d~~G~-lwv~~~----~gv~~~~~~g~~~~~~~~~~~ 278 (305)
T 3dr2_A 236 --------VPDGLPDGFCVDRGGW-LWSSSG----TGVCVFDSDGQLLGHIPTPGT 278 (305)
T ss_dssp --------CSSSCCCSEEECTTSC-EEECCS----SEEEEECTTSCEEEEEECSSC
T ss_pred --------CCCCCCCeEEECCCCC-EEEecC----CcEEEECCCCCEEEEEECCCc
Confidence 0000001112334677 455443 469999998888888888864
No 234
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=42.84 E-value=77 Score=30.75 Aligned_cols=67 Identities=12% Similarity=0.064 Sum_probs=42.2
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCc
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNS 337 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~ 337 (393)
+|++..+...+. .+.||..+ . ....+. ........-..-++++++|..|+.+..++.+..||+++++
T Consensus 96 dG~~LAs~s~dg-~V~iwd~~-----~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 96 IDDWMAVLSNNG-NVSVFKDN-----K---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp SSSCEEEEETTS-CEEEEETT-----E---EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCT
T ss_pred CCCEEEEEeCCC-cEEEEeCC-----c---eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCc
Confidence 555544554444 78888632 1 223333 2211001125578889999999999888899999999985
No 235
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=42.33 E-value=2.5e+02 Score=27.27 Aligned_cols=34 Identities=12% Similarity=0.041 Sum_probs=23.6
Q ss_pred eEEEEEeCCcEEEEEEcC----cEEEEEECCCCcEEEE
Q 046902 308 RPLGYSRNGVKLLLEVRR----EKLVWFDLETNSLRTV 341 (393)
Q Consensus 308 ~~~~~~~~g~~i~l~~~~----~~l~~yd~~t~~~~~v 341 (393)
..+.+.+||..|+..... ..++.+|+++++...+
T Consensus 258 ~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 258 TMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred EEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 346777888766554322 3589999999987765
No 236
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=40.03 E-value=2.4e+02 Score=26.54 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=59.9
Q ss_pred eeEeCc-eEEEeccCCCCCcEEEEEECCCceeeeec-CCCcccccCCceeEEEEEeCCeEEE-EEEcCCCeEEEEEEeec
Q 046902 207 GVLAGG-ALHWVSPKSSTRSVIVAFDLVAEEFYQLP-LPDSVNVSYANVHVDVGSLEGCLCV-FRFYNLVYVDMWMMKEH 283 (393)
Q Consensus 207 ~v~~~G-~lyw~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~l~~~~G~L~~-~~~~~~~~~~iW~l~~~ 283 (393)
++.-+| .+++.... ...+..+|+.+.+...+. .|. ..+... -+|+..+ ........-.||.++-.
T Consensus 116 ~~s~dg~~~~~~s~~---~~~~~l~d~~~g~~~~l~~~~~--------~~~~~s-pDG~~la~~~~~~~~~~~i~~~d~~ 183 (582)
T 3o4h_A 116 SGVDTGEAVVFTGAT---EDRVALYALDGGGLRELARLPG--------FGFVSD-IRGDLIAGLGFFGGGRVSLFTSNLS 183 (582)
T ss_dssp EEEECSSCEEEEEEC---SSCEEEEEEETTEEEEEEEESS--------CEEEEE-EETTEEEEEEEEETTEEEEEEEETT
T ss_pred eeCCCCCeEEEEecC---CCCceEEEccCCcEEEeecCCC--------ceEEEC-CCCCEEEEEEEcCCCCeEEEEEcCC
Confidence 455566 34444332 123447798887766543 221 122222 3565544 33333334557777632
Q ss_pred CCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCc--EEEEEECCCCcEE
Q 046902 284 AVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRRE--KLVWFDLETNSLR 339 (393)
Q Consensus 284 ~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~--~l~~yd~~t~~~~ 339 (393)
+ +.+.. +.... .......+++||..|+....+. .++.||+++++.+
T Consensus 184 ~--g~~~~---l~~~~-----~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 184 S--GGLRV---FDSGE-----GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp T--CCCEE---ECCSS-----CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred C--CCceE---eecCC-----CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 2 33432 22111 1235567788998888544444 7999999999887
No 237
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=39.95 E-value=2.8e+02 Score=27.15 Aligned_cols=103 Identities=16% Similarity=0.150 Sum_probs=60.9
Q ss_pred cEEEEEECCCc--eeeeecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCC-CCCeEEEEEeeCCCCC
Q 046902 225 SVIVAFDLVAE--EFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAV-KESWTKLFSVQEPTPT 301 (393)
Q Consensus 225 ~~il~fD~~~e--~~~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~-~~~W~~~~~i~~~~~~ 301 (393)
..|..+|+.+. .+..+..+.... .. .+...++.|++..........|+.++-... ...|+.+ ++...
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~-----~~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l--~~~~~-- 328 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDAD-----VS-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL--IPERQ-- 328 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSC-----EE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE--ECCCS--
T ss_pred cEEEEEECCCCCCceEEEeCCCCce-----EE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEE--ecCCC--
Confidence 47888888765 566665443321 11 244557788777654433566766653321 2458753 22111
Q ss_pred CCcceeeEEEEEeCCcEEEEEEcCc---EEEEEECCCCcEEEEEE
Q 046902 302 RSFLFLRPLGYSRNGVKLLLEVRRE---KLVWFDLETNSLRTVKI 343 (393)
Q Consensus 302 ~~~~~~~~~~~~~~g~~i~l~~~~~---~l~~yd~~t~~~~~v~~ 343 (393)
... .+..+|+.|++..... +|..+|++++..+.+..
T Consensus 329 -----~~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~ 367 (693)
T 3iuj_A 329 -----QVL-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVAL 367 (693)
T ss_dssp -----SCE-EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECC
T ss_pred -----CEE-EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeec
Confidence 112 6777788777764322 69999999988877744
No 238
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=39.28 E-value=2.9e+02 Score=27.16 Aligned_cols=30 Identities=10% Similarity=-0.092 Sum_probs=21.8
Q ss_pred eeEeCceEEEeccCCCCCcEEEEEECCCc--eeeee
Q 046902 207 GVLAGGALHWVSPKSSTRSVIVAFDLVAE--EFYQL 240 (393)
Q Consensus 207 ~v~~~G~lyw~~~~~~~~~~il~fD~~~e--~~~~i 240 (393)
.++.+|.+|.-... ..|.++|..+. .|+.-
T Consensus 117 ~~~~~g~v~v~~~d----g~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 117 VAVWKGKVYVGVLD----GRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp CEEETTEEEEECTT----SEEEEEETTTCCEEEEEE
T ss_pred cEEECCEEEEEccC----CEEEEEECCCCCEeeeec
Confidence 46688999887543 68999999765 46553
No 239
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=39.12 E-value=93 Score=27.97 Aligned_cols=73 Identities=7% Similarity=0.156 Sum_probs=41.9
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCC-cEEEEEEcCcEEEEEECCCCcE
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNG-VKLLLEVRREKLVWFDLETNSL 338 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g-~~i~l~~~~~~l~~yd~~t~~~ 338 (393)
+|.+.+.+ . +..+.||-++..+ ..+.. ..+....+........-+.+.++| ..++....++.+..||+.+++.
T Consensus 188 ~~~~l~s~-~-d~~i~iwd~~~~~--~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 188 DYETYLSA-D-DLRINLWHLEITD--RSFNI-VDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp TSSEEEEE-C-SSEEEEEETTEEE--EEEEE-EECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred CCCEEEEe-C-CCeEEEEECCCCC--ceeee-eecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 66666655 3 4599999887411 11211 111111111111234456777887 7777777777899999998774
No 240
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=38.78 E-value=2e+02 Score=25.12 Aligned_cols=97 Identities=11% Similarity=0.126 Sum_probs=54.9
Q ss_pred cEEEEEECCCceeee-ecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCC
Q 046902 225 SVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTR 302 (393)
Q Consensus 225 ~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~ 302 (393)
..|..+|+.+.+... +..... .-....+... +|.+.+.+..+. .+.+|-+.. .. .+..+....
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~g~~l~sgs~Dg-~v~~wd~~~----~~--~~~~~~~h~--- 240 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGHGA-----DVLCLDLAPSETGNTFVSGGCDK-KAMVWDMRS----GQ--CVQAFETHE--- 240 (354)
T ss_dssp SEEEEEETTTCCEEEEEECCSS-----CEEEEEECCCSSCCEEEEEETTS-CEEEEETTT----CC--EEEEECCCS---
T ss_pred CcEEEEeCCCCeEEEEEcCCCC-----CeEEEEEEeCCCCCEEEEEeCCC-eEEEEECCC----Cc--EEEEecCCC---
Confidence 578888988765432 221111 0001122212 456666665544 899998763 12 222232211
Q ss_pred CcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcE
Q 046902 303 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 338 (393)
Q Consensus 303 ~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~ 338 (393)
....-+.+.++|+.++....+..+..||+.+++.
T Consensus 241 --~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 241 --SDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp --SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred --CCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 1244567778888777777777899999988754
No 241
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=38.76 E-value=1.8e+02 Score=24.52 Aligned_cols=183 Identities=14% Similarity=0.149 Sum_probs=95.7
Q ss_pred eeceEEEeeC---CceEEEEeccccceec-cCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEE
Q 046902 99 CNGLIALCNS---VQELALFNPSTRKLKT-LPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYS 174 (393)
Q Consensus 99 ~~GLl~~~~~---~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vys 174 (393)
.+|.|..+.. .+.+.+.++.|++... ++.+. .....|+..+ .+ ++..+.. ....+.|||
T Consensus 29 ~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-------~~fgeGi~~~--~~--~ly~ltw------~~~~v~v~D 91 (243)
T 3mbr_X 29 LRGHLYESTGETGRSSVRKVDLETGRILQRAEVPP-------PYFGAGIVAW--RD--RLIQLTW------RNHEGFVYD 91 (243)
T ss_dssp ETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-------TCCEEEEEEE--TT--EEEEEES------SSSEEEEEE
T ss_pred ECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-------CcceeEEEEe--CC--EEEEEEe------eCCEEEEEE
Confidence 4577777653 2479999999997654 33222 1222344444 22 3444331 345788999
Q ss_pred eCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCcee-eeecCCCcccccCCce
Q 046902 175 LKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEF-YQLPLPDSVNVSYANV 253 (393)
Q Consensus 175 s~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~ 253 (393)
..+.+=. ..++ +. ...-++..+|...|++.. ...|..+|+++.+- ..+++-..... ...
T Consensus 92 ~~tl~~~--~ti~----------~~---~~Gwglt~dg~~L~vSdg---s~~l~~iDp~t~~~~~~I~V~~~g~~-~~~- 151 (243)
T 3mbr_X 92 LATLTPR--ARFR----------YP---GEGWALTSDDSHLYMSDG---TAVIRKLDPDTLQQVGSIKVTAGGRP-LDN- 151 (243)
T ss_dssp TTTTEEE--EEEE----------CS---SCCCEEEECSSCEEEECS---SSEEEEECTTTCCEEEEEECEETTEE-CCC-
T ss_pred CCcCcEE--EEEe----------CC---CCceEEeeCCCEEEEECC---CCeEEEEeCCCCeEEEEEEEccCCcc-ccc-
Confidence 9876432 2222 11 123456677766666542 56899999987543 33443211100 011
Q ss_pred eEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCC--------CcceeeEEEEEeCCcEEEEEEcC
Q 046902 254 HVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTR--------SFLFLRPLGYSRNGVKLLLEVRR 325 (393)
Q Consensus 254 ~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~--------~~~~~~~~~~~~~g~~i~l~~~~ 325 (393)
--.|-..+|+|++...... .+ -+.+- .+-.-+.+|++..+.. ......-+++.++++.+|+..+.
T Consensus 152 lNeLe~~~G~lyanvw~s~-~I--~vIDp----~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 152 LNELEWVNGELLANVWLTS-RI--ARIDP----ASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEEEEETTEEEEEETTTT-EE--EEECT----TTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred ceeeEEeCCEEEEEECCCC-eE--EEEEC----CCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 1134445999886654333 33 33442 2234556666543221 11234456777777778877653
No 242
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=38.56 E-value=2e+02 Score=25.04 Aligned_cols=209 Identities=10% Similarity=0.028 Sum_probs=103.9
Q ss_pred eceEEEeeC-CceEEEEecccccee-ccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCC
Q 046902 100 NGLIALCNS-VQELALFNPSTRKLK-TLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKT 177 (393)
Q Consensus 100 ~GLl~~~~~-~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t 177 (393)
+|.|...+. ...+..++|.++... .+.... .....++.+|+..+. ++... .....+++++...
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~-------l~~p~glavd~~~g~--ly~~d------~~~~~I~~~~~dG 110 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG-------LLSPDGLACDWLGEK--LYWTD------SETNRIEVSNLDG 110 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCCCEEEEEC-------CSCCCEEEEETTTTE--EEEEE------TTTTEEEEEETTS
T ss_pred CCEEEEEECCCCcEEEEEccCCCceEEEEcCC-------CCCccEEEEEcCCCe--EEEEE------CCCCEEEEEECCC
Confidence 566666653 346777777665311 111110 011236777765443 22221 1234678888765
Q ss_pred CCeEEccccCcccccccccccccccccCceeEe---CceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCcee
Q 046902 178 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVH 254 (393)
Q Consensus 178 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~ 254 (393)
..=+.+..-. . ....++.+ +|.+||.... ....|..+|+....-..+- ..... . .
T Consensus 111 ~~~~~l~~~~------------~--~~P~giavdp~~g~ly~td~~--~~~~I~r~~~dG~~~~~~~-~~~l~---~--P 168 (318)
T 3sov_A 111 SLRKVLFWQE------------L--DQPRAIALDPSSGFMYWTDWG--EVPKIERAGMDGSSRFIII-NSEIY---W--P 168 (318)
T ss_dssp CSCEEEECSS------------C--SSEEEEEEEGGGTEEEEEECS--SSCEEEEEETTSCSCEEEE-CSSCS---C--E
T ss_pred CcEEEEEeCC------------C--CCccEEEEeCCCCEEEEEecC--CCCEEEEEEcCCCCeEEEE-ECCCC---C--c
Confidence 4322221100 0 11223433 5899998532 2368999998754333221 11111 1 1
Q ss_pred EEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEE
Q 046902 255 VDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWF 331 (393)
Q Consensus 255 ~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~y 331 (393)
-.|+.. +|+||++..... .|++.+-++. . =..+. . .. ...|.++.-+++.+|+... ...+..+
T Consensus 169 nglavd~~~~~lY~aD~~~~---~I~~~d~dG~-~-~~~~~--~-~~------~~~P~glav~~~~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADAKLN---FIHKSNLDGT-N-RQAVV--K-GS------LPHPFALTLFEDILYWTDWSTHSILAC 234 (318)
T ss_dssp EEEEEETTTTEEEEEETTTT---EEEEEETTSC-S-CEEEE--C-SC------CSCEEEEEEETTEEEEEETTTTEEEEE
T ss_pred cEEEEeccCCEEEEEECCCC---EEEEEcCCCC-c-eEEEe--c-CC------CCCceEEEEeCCEEEEEecCCCeEEEE
Confidence 244443 788998875433 4555553331 1 11111 1 11 2356666555667777653 4579999
Q ss_pred ECCCCc-EEEEEEecCCCC-eeeeEEEEecccc
Q 046902 332 DLETNS-LRTVKIDTHGLD-FVDTEICMASLVP 362 (393)
Q Consensus 332 d~~t~~-~~~v~~~~~~~~-~~~~~~y~~SL~~ 362 (393)
|+.+++ .+.|. .+.. -+.+.+|.++..+
T Consensus 235 ~~~~G~~~~~i~---~~~~~P~~i~v~~~~~q~ 264 (318)
T 3sov_A 235 NKYTGEGLREIH---SDIFSPMDIHAFSQQRQP 264 (318)
T ss_dssp ETTTCCSCEEEE---CCCSSCCCEEEECGGGSC
T ss_pred ECCCCCceEEEe---CCCCCCcEEEEecccccc
Confidence 997665 44443 2332 4456677776543
No 243
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=38.50 E-value=2.9e+02 Score=26.90 Aligned_cols=189 Identities=10% Similarity=0.039 Sum_probs=98.0
Q ss_pred eEEEeeCCceEEEEecccccee-ccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCe
Q 046902 102 LIALCNSVQELALFNPSTRKLK-TLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSW 180 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W 180 (393)
+|++. ....+...+.-+.... .+|... ....+++.||+..+ +|+.... ....+..++......
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~-------~~~~~~l~~d~~~~--~lywtD~------~~~~I~r~~~~g~~~ 71 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTG-------VKEASALDFDVTDN--RIYWTDI------SLKTISRAFMNGSAL 71 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCS-------CSCEEEEEEETTTT--EEEEEET------TTTEEEEEETTSCSC
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCC-------CCceEEEEEECCCC--EEEEEEC------CCCeEEEEECCCCCc
Confidence 34444 2445666666554432 333322 22357888998665 3443321 234566666665555
Q ss_pred EEccccCcccccccccccccccccCceeE---eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEE
Q 046902 181 RRISNLPRFLRDFYDYLYHSLFRKGYGVL---AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDV 257 (393)
Q Consensus 181 ~~~~~~p~~~~~~~~~~~~~~~~~~~~v~---~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l 257 (393)
+.+.... . ....++. .+|.|||.-.. ...|.++|+....-..+.. .... . ...|
T Consensus 72 ~~v~~~g------------~--~~P~GlAvD~~~~~LY~tD~~---~~~I~v~~~dG~~~~~l~~-~~l~---~--P~~i 128 (628)
T 4a0p_A 72 EHVVEFG------------L--DYPEGMAVDWLGKNLYWADTG---TNRIEVSKLDGQHRQVLVW-KDLD---S--PRAL 128 (628)
T ss_dssp EEEECSS------------C--SCCCEEEEETTTTEEEEEETT---TTEEEEEETTSTTCEEEEC-SSCC---C--EEEE
T ss_pred EEEEeCC------------C--CCcceEEEEeCCCEEEEEECC---CCEEEEEecCCCcEEEEEe-CCCC---C--cccE
Confidence 4432111 1 1223444 46999998443 4689999987654333321 1111 1 1244
Q ss_pred EEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEEECC
Q 046902 258 GSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLE 334 (393)
Q Consensus 258 ~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd~~ 334 (393)
+.. +|.||...... .-.|++..-++. . -..+ +. . .....-+++..+++.||+... ...+..+|++
T Consensus 129 avdp~~G~lY~tD~g~--~~~I~r~~~dG~-~-~~~l--~~--~----~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 129 ALDPAEGFMYWTEWGG--KPKIDRAAMDGS-E-RTTL--VP--N----VGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp EEETTTTEEEEEECSS--SCEEEEEETTSC-S-CEEE--EC--S----CSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEccCCCeEEEeCCCC--CCEEEEEeCCCC-c-eEEE--EC--C----CCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 544 78888876432 335666654442 1 1111 11 1 112233455555678888754 3579999998
Q ss_pred CCcEEEE
Q 046902 335 TNSLRTV 341 (393)
Q Consensus 335 t~~~~~v 341 (393)
++..+.+
T Consensus 197 G~~~~v~ 203 (628)
T 4a0p_A 197 GLNREVI 203 (628)
T ss_dssp SCSCEEE
T ss_pred CCceEEe
Confidence 8766443
No 244
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=38.25 E-value=2.2e+02 Score=25.56 Aligned_cols=67 Identities=12% Similarity=0.088 Sum_probs=39.4
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCc-EEEEEEcCcEEEEEECCCC
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGV-KLLLEVRREKLVWFDLETN 336 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~-~i~l~~~~~~l~~yd~~t~ 336 (393)
++.+++.+.... .+.||-+.... .......+.... ....-+.+.+++. .++....++.+..||+.+.
T Consensus 243 ~~~~l~s~~~dg-~i~i~d~~~~~---~~~~~~~~~~~~-----~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 243 HESLFGSVADDQ-KLMIWDTRNNN---TSKPSHTVDAHT-----AEVNCLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp CTTEEEEEETTS-EEEEEETTCSC---SSSCSEEEECCS-----SCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCCEEEEEeCCC-eEEEEECCCCC---CCcceeEeecCC-----CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 566766666544 99999887532 111222222111 1244567777776 4555566678999999873
No 245
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=38.16 E-value=2e+02 Score=25.06 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=24.8
Q ss_pred eeEEEEEeCCcEEEEEEcCcE-EEEEECCCCcEE
Q 046902 307 LRPLGYSRNGVKLLLEVRREK-LVWFDLETNSLR 339 (393)
Q Consensus 307 ~~~~~~~~~g~~i~l~~~~~~-l~~yd~~t~~~~ 339 (393)
..-+++.++|..++-...++. +..||+++++..
T Consensus 198 v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~ 231 (355)
T 3vu4_A 198 IKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV 231 (355)
T ss_dssp EEEEEECTTSSEEEEEETTCSEEEEEETTTCCEE
T ss_pred eEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 445677888887777777776 999999987643
No 246
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=37.63 E-value=3.2e+02 Score=27.13 Aligned_cols=211 Identities=9% Similarity=0.069 Sum_probs=94.4
Q ss_pred eceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC
Q 046902 100 NGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS 179 (393)
Q Consensus 100 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~ 179 (393)
+|-|.+......++.+||.++++..++.... ...+ ......+..|... . +.+.. ....+..|+..++.
T Consensus 127 ~g~lwi~t~~~gl~~~~~~~~~~~~~~~~~~-~~l~-~~~i~~i~~d~~g---~-lwigt------~~~Gl~~~~~~~~~ 194 (781)
T 3v9f_A 127 GKGLWVCTYYRGIEYLDIATGKFTHYNKSTV-PALP-SEQTWTATEAEDG---K-LYIGH------VEGGLSILSLNDKS 194 (781)
T ss_dssp TSEEEEEESSSCEEEEETTTTEEEEESTTTC-TTCS-CCCEEEEEEEETT---E-EEEEE------TTTEEEEEETTTTE
T ss_pred CCCEEEEECCCCeeEEECCCCeEEeeccCcc-cCCC-ccceEEEEECCCC---C-EEEEe------cCCCeEEEcCCCCc
Confidence 6777666434569999999998877654320 0011 1122334444322 2 22221 12257778888887
Q ss_pred eEEccccCcccccccccccccccccCceeEeC-ceEEEeccCCCCCcEEEEEECCCceeeeecCCCcc--cccCCceeEE
Q 046902 180 WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAG-GALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSV--NVSYANVHVD 256 (393)
Q Consensus 180 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~-G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~--~~~~~~~~~~ 256 (393)
++.....+... .......-..++.+ .--.|++.. ..|..||..+++|..+..+... .. ....-..
T Consensus 195 ~~~~~~~~~~~-------~~l~~~~i~~i~~d~~g~lwigt~----~Gl~~~d~~~~~~~~~~~~~~~~~~l-~~~~i~~ 262 (781)
T 3v9f_A 195 VKHFVHDPQNP-------NSLPGNDVRCIYKDTNGNIWIGTS----KGLALFNANTETFTNFHNNPGNIHGA-LSSYIFS 262 (781)
T ss_dssp EEEECC---------------CCSSEEEEEECTTCCEEEEET----TEEEEEETTTTEEEC------------CCCCEEE
T ss_pred eEeeecCCCCc-------ccCCCCceeEEEEcCCCCEEEEeC----CcHheECCCCCcEEEEEcCCCccccc-cCceEEE
Confidence 76653211000 00000111223332 223566654 3799999999999877544310 00 1111224
Q ss_pred EEE-eCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEE-----eeCCC--CCCCcceeeEEEEEeCCcEEEEEEcCcEE
Q 046902 257 VGS-LEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFS-----VQEPT--PTRSFLFLRPLGYSRNGVKLLLEVRREKL 328 (393)
Q Consensus 257 l~~-~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~-----i~~~~--~~~~~~~~~~~~~~~~g~~i~l~~~~~~l 328 (393)
+.+ .+|.|.+..... .+. .++... ..+..... +.... .........-+...++| .|.+.+.+..|
T Consensus 263 i~~d~~g~lWigt~~~--Gl~--~~~~~~--~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g-~lWigt~~~Gl 335 (781)
T 3v9f_A 263 IKQLKDNKLWIATELN--GIM--ILDLQQ--NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN-NIWIGTWGGGI 335 (781)
T ss_dssp EEECTTSEEEEEESSS--CEE--EEETTC--C---------CEEECBCSSTTSBSSSCEEEEEECSSC-CEEEEEBSSCE
T ss_pred EEECCCCCEEEEeCCC--CeE--EECCCC--CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCC-CEEEEecCCeE
Confidence 444 366766655322 232 233211 12221111 10100 00001112233444455 47777755569
Q ss_pred EEEECCCCcEEEE
Q 046902 329 VWFDLETNSLRTV 341 (393)
Q Consensus 329 ~~yd~~t~~~~~v 341 (393)
.+||++++.++.+
T Consensus 336 ~~~~~~~~~~~~~ 348 (781)
T 3v9f_A 336 NFISNAPPTFHTW 348 (781)
T ss_dssp EEECSSCCSCEEE
T ss_pred EEeCCCCCcceee
Confidence 9999888776655
No 247
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=37.02 E-value=3e+02 Score=26.70 Aligned_cols=96 Identities=20% Similarity=0.280 Sum_probs=54.8
Q ss_pred cEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCC
Q 046902 225 SVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRS 303 (393)
Q Consensus 225 ~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 303 (393)
..|..+|+.+.+....-. .+. .. -..+... +|++.+.+..+. .+.||-+.. . ..+..+....
T Consensus 541 ~~v~vwd~~~~~~~~~~~-~h~----~~-v~~v~~spdg~~l~sg~~Dg-~i~iwd~~~----~--~~~~~~~~~~---- 603 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTLA-GHT----GY-VSTVAVSPDGSLCASGGKDG-VVLLWDLAE----G--KKLYSLEANS---- 603 (694)
T ss_dssp SCEEEEETTTCCEEEEEC-CCS----SC-EEEEEECTTSSEEEEEETTS-BCEEEETTT----T--EEEECCBCSS----
T ss_pred CeEEEEECCCCcEEEEEc-CCC----CC-EEEEEEeCCCCEEEEEeCCC-eEEEEECCC----C--ceEEEecCCC----
Confidence 468889988765543211 111 11 1233333 677766666544 899998763 1 2333333211
Q ss_pred cceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEE
Q 046902 304 FLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 340 (393)
Q Consensus 304 ~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~ 340 (393)
...-+++.+++..+... .+..+..||+++++...
T Consensus 604 --~v~~~~~sp~~~~l~~~-~~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 604 --VIHALCFSPNRYWLCAA-TEHGIKIWDLESKSIVE 637 (694)
T ss_dssp --CEEEEEECSSSSEEEEE-ETTEEEEEETTTTEEEE
T ss_pred --cEEEEEEcCCCcEEEEE-cCCCEEEEECCCCCChh
Confidence 24456777777655444 44569999999987543
No 248
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=36.96 E-value=2e+02 Score=24.68 Aligned_cols=71 Identities=8% Similarity=-0.064 Sum_probs=36.4
Q ss_pred EEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEe--CCcEEEEEEcCcEEEEEECC
Q 046902 257 VGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSR--NGVKLLLEVRREKLVWFDLE 334 (393)
Q Consensus 257 l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~--~g~~i~l~~~~~~l~~yd~~ 334 (393)
+.-..+.+.+.... +..+.||.+.. ..|........... ......+++.+ ++..|.-...++.+..||++
T Consensus 256 v~~s~~~~l~s~~~-dg~v~iw~~~~----~~~~~~~~~~~~h~---~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 256 VAWGFNGLIASVGA-DGVLAVYEEVD----GEWKVFAKRALCHG---VYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEECTTSCEEEEET-TSCEEEEEEET----TEEEEEEEESCTTT---TSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEcCCCEEEEEeC-CCEEEEEEcCC----CceEEEeccccccc---cceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 33334444444443 34899999873 45766544422110 00133456665 45555556667789999987
Q ss_pred C
Q 046902 335 T 335 (393)
Q Consensus 335 t 335 (393)
+
T Consensus 328 ~ 328 (330)
T 2hes_X 328 K 328 (330)
T ss_dssp -
T ss_pred c
Confidence 5
No 249
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=35.26 E-value=3.4e+02 Score=26.77 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=32.8
Q ss_pred ceeEe---CceEEEeccCCCCCcEEEEEECCCceeeee-cCCCcccccCCceeEEEEEeCCeEEEEEEc
Q 046902 206 YGVLA---GGALHWVSPKSSTRSVIVAFDLVAEEFYQL-PLPDSVNVSYANVHVDVGSLEGCLCVFRFY 270 (393)
Q Consensus 206 ~~v~~---~G~lyw~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~ 270 (393)
.++.+ +|.|||.-.. ...|.++|+....-+.+ ..+.... . ...|+..++.||++...
T Consensus 543 nGlavd~~~~~LY~aD~~---~~~I~~~d~dG~~~~~~~~~~~~~~---~--P~glavd~~~lywtd~~ 603 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSK---LHSISSIDVNGGNRKTILEDEKRLA---H--PFSLAVFEDKVFWTDII 603 (699)
T ss_dssp CCEEECTTTCCEEEEETT---TTEEEEECSSSSCCEEECCCSSSCS---S--CCCCEEETTEEEEECST
T ss_pred cEEEEeccCCEEEEEecC---CCeEEEEccCCCceEEEEecCCcCC---C--ceEeEEECCEEEEEeCC
Confidence 35554 4899998543 46899999975433333 2221111 1 12445567788877743
No 250
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=34.16 E-value=2.4e+02 Score=25.25 Aligned_cols=46 Identities=9% Similarity=-0.047 Sum_probs=30.7
Q ss_pred CeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc--CcEEEEEECCCCcEE
Q 046902 288 SWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR--REKLVWFDLETNSLR 339 (393)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~--~~~l~~yd~~t~~~~ 339 (393)
..+.+.+|+... ...-+++.++|..+|+... ++.+..+|++|.+..
T Consensus 303 t~~vv~~i~vg~------~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 303 VGQTSGPISNGH------DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp SCCEEECCEEEE------EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred CCeEEEEEECCC------CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 355666666532 2334666788876666654 578999999998754
No 251
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=33.95 E-value=3.2e+02 Score=26.13 Aligned_cols=145 Identities=10% Similarity=-0.082 Sum_probs=78.6
Q ss_pred ceEEEEecc-cc---ceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccc
Q 046902 110 QELALFNPS-TR---KLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISN 185 (393)
Q Consensus 110 ~~~~V~NP~-T~---~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~ 185 (393)
..++++|.. ++ +...|.... ........+.|..+ ++.... ......+.+++..++.++.+..
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~-------~~~~~~~~~spdg~---l~~~~~----~~~~~~l~~~~~~~~~~~~l~~ 282 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGP-------EEAIAQAEWAPDGS---LIVATD----RTGWWNLHRVDPATGAATQLCR 282 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEET-------TBCEEEEEECTTSC---EEEEEC----TTSSCEEEEECTTTCCEEESSC
T ss_pred cEEEEEEECCCCcccccEEeCCCC-------CceEcceEECCCCe---EEEEEC----CCCCeEEEEEECCCCceeeccc
Confidence 479999988 56 555554321 11223455665543 333221 1123467777777888887753
Q ss_pred cCcccccccccccccccccCceeE-eCceEEEeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEE-EEeCCe
Q 046902 186 LPRFLRDFYDYLYHSLFRKGYGVL-AGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDV-GSLEGC 263 (393)
Q Consensus 186 ~p~~~~~~~~~~~~~~~~~~~~v~-~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l-~~~~G~ 263 (393)
....... .........-.+ -+|.+++.... ....|..+|+.+.....+..+... . ..+ ...++.
T Consensus 283 ~~~~~~~-----p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~d~~~~~~~~l~~~~~~------~-~~~~s~~~~~ 348 (662)
T 3azo_A 283 REEEFAG-----PLWTPGMRWFAPLANGLIAVVHGK--GAAVLGILDPESGELVDAAGPWTE------W-AATLTVSGTR 348 (662)
T ss_dssp CSSBSSC-----CCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEEETTTTEEEECCSSCCE------E-EEEEEEETTE
T ss_pred ccccccC-----ccccccCceEeEeCCCEEEEEEEc--CccEEEEEECCCCcEEEecCCCCe------E-EEEEecCCCE
Confidence 2210000 000000111122 26888877664 457899999988877666554322 1 123 445667
Q ss_pred EEEEEEcCCCeEEEEEEee
Q 046902 264 LCVFRFYNLVYVDMWMMKE 282 (393)
Q Consensus 264 L~~~~~~~~~~~~iW~l~~ 282 (393)
+.++.........||.++-
T Consensus 349 ~~~~~~~~~~~~~i~~~d~ 367 (662)
T 3azo_A 349 AVGVAASPRTAYEVVELDT 367 (662)
T ss_dssp EEEEEEETTEEEEEEEEET
T ss_pred EEEEEcCCCCCCEEEEEEC
Confidence 7777665555788998874
No 252
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=33.76 E-value=88 Score=27.54 Aligned_cols=31 Identities=23% Similarity=0.118 Sum_probs=25.7
Q ss_pred EEEeCCcEEEEEEcCcEEEEEECCCCcEEEE
Q 046902 311 GYSRNGVKLLLEVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 311 ~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v 341 (393)
.++++|..|++...+..++.+|+++++.+.+
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 87 FLSPDDDALFYVKDGRNLMRVDLATLEENVV 117 (388)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceee
Confidence 5778998888887666799999999987765
No 253
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=33.70 E-value=7.3 Score=35.33 Aligned_cols=113 Identities=13% Similarity=-0.038 Sum_probs=0.0
Q ss_pred CceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeec
Q 046902 205 GYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEH 283 (393)
Q Consensus 205 ~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~ 283 (393)
..++..+|.+|.-... ..|.++|..+.+-.. ++. ... ...-...+|.++++...+. .+..|-.+.
T Consensus 3 ssP~v~~~~v~~gs~d----g~v~a~d~~tG~~~W~~~~-~~~-------~s~p~~~~g~~~v~~s~dg-~l~a~d~~t- 68 (369)
T 2hz6_A 3 STVTLPETLLFVSTLD----GSLHAVSKRTGSIKWTLKE-DPV-------LQVPTHVEEPAFLPDPNDG-SLYTLGSKN- 68 (369)
T ss_dssp -----CTTEEEEEETT----SEEEEEETTTCCEEEEEEC-CCS-------CCCC-----CCEEECTTTC-CEEEC-----
T ss_pred CCCeeeCCEEEEEcCC----CEEEEEECCCCCEEEEecC-CCc-------eecceEcCCCEEEEeCCCC-EEEEEECCC-
Q ss_pred CCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEE
Q 046902 284 AVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 340 (393)
Q Consensus 284 ~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~ 340 (393)
.+..|......+... ...|+.. +++.|++...+..++.+|++|++...
T Consensus 69 -G~~~w~~~~~~~~~~------~~sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w 116 (369)
T 2hz6_A 69 -NEGLTKLPFTIPELV------QASPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQ 116 (369)
T ss_dssp --CCSEECSCCHHHHH------TTCSCC-------CCCCEEEEEEEEECCC------
T ss_pred -CceeeeeeccCcccc------ccCceEe--cCCEEEEEeCCCEEEEEECCCCcEEE
No 254
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=33.68 E-value=3.6e+02 Score=26.59 Aligned_cols=146 Identities=13% Similarity=0.043 Sum_probs=0.0
Q ss_pred cEEeeeeeceEEE-eeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEE
Q 046902 93 TEVLGSCNGLIAL-CNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVE 171 (393)
Q Consensus 93 ~~~~~s~~GLl~~-~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 171 (393)
..+....+|-|-+ ......++.+||.|+++..+.... ........++..|.... +.+. ....+.
T Consensus 475 ~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~----~~~~~~~~~i~~d~~g~----lWig-------t~~Gl~ 539 (758)
T 3ott_A 475 NQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADE----LTGEKSPNYLLCDEDGL----LWVG-------FHGGVM 539 (758)
T ss_dssp EEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTT----SCGGGCEEEEEECTTSC----EEEE-------ETTEEE
T ss_pred eeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCC----cCCCcccceEEECCCCC----EEEE-------ecCceE
Q ss_pred EEEeCCCCeEEc--cccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeeecCCCccccc
Q 046902 172 VYSLKTNSWRRI--SNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVS 249 (393)
Q Consensus 172 Vyss~t~~W~~~--~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~ 249 (393)
.|+..++.++.. ..+| .....++..+.--.|++.. ..|..||+.+.++....+|.....
T Consensus 540 ~~~~~~~~~~~~~~~gl~--------------~~~i~~i~~~~g~lWi~t~----~Gl~~~~~~~~~~~~~~~~~~~~~- 600 (758)
T 3ott_A 540 RINPKDESQQSISFGSFS--------------NNEILSMTCVKNSIWVSTT----NGLWIIDRKTMDARQQNMTNKRFT- 600 (758)
T ss_dssp EECC--CCCCBCCCCC-----------------CCEEEEEEETTEEEEEES----SCEEEEETTTCCEEEC--CCCCCS-
T ss_pred EEecCCCceEEecccCCC--------------ccceEEEEECCCCEEEECC----CCeEEEcCCCceeEEecCCCCcee-
Q ss_pred CCceeEEEEEeCCeEEEEEEcCCCeEE
Q 046902 250 YANVHVDVGSLEGCLCVFRFYNLVYVD 276 (393)
Q Consensus 250 ~~~~~~~l~~~~G~L~~~~~~~~~~~~ 276 (393)
.......+|.|++.....-..++
T Consensus 601 ----~~~~~~~~G~l~fG~~~Gl~~f~ 623 (758)
T 3ott_A 601 ----SLLFDPKEDCVYLGGADGFGISH 623 (758)
T ss_dssp ----EEEEETTTTEEEEECBSEEEEEE
T ss_pred ----eeEEECCCCcEEEecCCceEEEC
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=33.58 E-value=3.5e+02 Score=26.42 Aligned_cols=29 Identities=17% Similarity=0.105 Sum_probs=21.1
Q ss_pred eeEeCceEEEeccCCCCCcEEEEEECCCc--eeee
Q 046902 207 GVLAGGALHWVSPKSSTRSVIVAFDLVAE--EFYQ 239 (393)
Q Consensus 207 ~v~~~G~lyw~~~~~~~~~~il~fD~~~e--~~~~ 239 (393)
.++.+|.+|.-... ..|.++|..+. .|+.
T Consensus 113 ~~~~~~~v~v~~~d----g~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 113 VALWGDKVYVGTLD----GRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp CEEEBTEEEEECTT----SEEEEEETTTCCEEEEE
T ss_pred eEEECCEEEEEcCC----CEEEEEECCCCCEeeee
Confidence 45678899877543 68999998765 4655
No 256
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=31.62 E-value=4.3e+02 Score=26.89 Aligned_cols=97 Identities=11% Similarity=0.145 Sum_probs=56.2
Q ss_pred cEEEEEECCCceeeeecCCCcccccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCc
Q 046902 225 SVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSF 304 (393)
Q Consensus 225 ~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 304 (393)
..|..+|..+.+.... ++.. .. -..+.-..|+ +++....+..+.||-++. .. .+..+....
T Consensus 39 g~I~lw~~~~~~~~~~-~~~~-----~~-V~~l~fspg~-~L~S~s~D~~v~lWd~~~----~~--~~~~~~~~~----- 99 (902)
T 2oaj_A 39 GEVHIYGQQQVEVVIK-LEDR-----SA-IKEMRFVKGI-YLVVINAKDTVYVLSLYS----QK--VLTTVFVPG----- 99 (902)
T ss_dssp SEEEEECSTTCEEEEE-CSSC-----CC-EEEEEEETTT-EEEEEETTCEEEEEETTT----CS--EEEEEECSS-----
T ss_pred CEEEEEeCCCcEEEEE-cCCC-----CC-EEEEEEcCCC-EEEEEECcCeEEEEECCC----Cc--EEEEEcCCC-----
Confidence 4566777766544322 2211 11 1233333476 344434455999998764 11 233333211
Q ss_pred ceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEEE
Q 046902 305 LFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 305 ~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v 341 (393)
...-+.+.++|+.++....++.+..||+++++....
T Consensus 100 -~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~ 135 (902)
T 2oaj_A 100 -KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSF 135 (902)
T ss_dssp -CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred -CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 244567778898888888777899999999887543
No 257
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=31.24 E-value=2.5e+02 Score=23.95 Aligned_cols=94 Identities=14% Similarity=0.170 Sum_probs=53.4
Q ss_pred cEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCC
Q 046902 225 SVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRS 303 (393)
Q Consensus 225 ~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 303 (393)
..|..+|+.+.+....-. ... ... ..+... +|.+.+....+. .+.||-+.. -..+..+....
T Consensus 176 ~~i~~wd~~~~~~~~~~~-~h~----~~v-~~~~~sp~g~~l~s~~~dg-~i~iwd~~~------~~~~~~~~~~~---- 238 (319)
T 3frx_A 176 KMVKAWNLNQFQIEADFI-GHN----SNI-NTLTASPDGTLIASAGKDG-EIMLWNLAA------KKAMYTLSAQD---- 238 (319)
T ss_dssp SCEEEEETTTTEEEEEEC-CCC----SCE-EEEEECTTSSEEEEEETTC-EEEEEETTT------TEEEEEEECCS----
T ss_pred CEEEEEECCcchhheeec-CCC----CcE-EEEEEcCCCCEEEEEeCCC-eEEEEECCC------CcEEEEecCCC----
Confidence 568888988765433211 110 111 133333 677666665544 999998763 13444444321
Q ss_pred cceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcE
Q 046902 304 FLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 338 (393)
Q Consensus 304 ~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~ 338 (393)
...-+++.++|..+..... ..+..|+++++..
T Consensus 239 --~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~~ 270 (319)
T 3frx_A 239 --EVFSLAFSPNRYWLAAATA-TGIKVFSLDPQYL 270 (319)
T ss_dssp --CEEEEEECSSSSEEEEEET-TEEEEEEETTEEE
T ss_pred --cEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCee
Confidence 2445778888876665554 4588888887654
No 258
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=30.71 E-value=2.9e+02 Score=24.63 Aligned_cols=197 Identities=12% Similarity=0.150 Sum_probs=94.5
Q ss_pred eceEEEee-------------CCceEEEEeccc--cceeccCCCCCCCCCCCCceEEEEeeeCC-CCCeEEEEEEEeecC
Q 046902 100 NGLIALCN-------------SVQELALFNPST--RKLKTLPLPPCLVGFPSAFTFYGFGQDKI-NDDYKLVRVLHFKGN 163 (393)
Q Consensus 100 ~GLl~~~~-------------~~~~~~V~NP~T--~~~~~LP~~~~~~~~~~~~~~~~~g~d~~-~~~ykVv~~~~~~~~ 163 (393)
+|++.+.. ....+++.+|.+ .+..+|......++ ......+|+.+.+. .+..+++++...
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~-~~~f~PhGi~~~~d~dg~~~L~Vvnh~--- 135 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLD-ISSFNPHGISTFIDDDNTVYLLVVNHP--- 135 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCC-GGGCCEEEEEEEECTTCCEEEEEEECS---
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCC-cCceeeeeeEEEECCCCcEEEEEEECC---
Confidence 67776664 356799999984 34444432210000 11334567766553 445666666542
Q ss_pred CCCccEEEEEEeCC--CCeEEccccCcccccccccccccccccCceeEeCceEEEeccC--------------CCCCcEE
Q 046902 164 DGDDVEVEVYSLKT--NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPK--------------SSTRSVI 227 (393)
Q Consensus 164 ~~~~~~~~Vyss~t--~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~--------------~~~~~~i 227 (393)
.....+|+|.... +....+..... ........-.+.-+|.+|.-... ......|
T Consensus 136 -~~~s~ielf~~d~~~~~~~~~~~~~g---------~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~v 205 (355)
T 3sre_A 136 -GSSSTVEVFKFQEEEKSLLHLKTIRH---------KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFV 205 (355)
T ss_dssp -TTCCEEEEEEEETTTTEEEEEEEECC---------TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEE
T ss_pred -CCCCeEEEEEEECCCCEEEEEecccc---------CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEE
Confidence 1346788877654 44443332220 00111122234456776543210 1123578
Q ss_pred EEEECCCceeeee----cCCCcccccCCceeEEEEEe-CC-eEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCC
Q 046902 228 VAFDLVAEEFYQL----PLPDSVNVSYANVHVDVGSL-EG-CLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPT 301 (393)
Q Consensus 228 l~fD~~~e~~~~i----~lP~~~~~~~~~~~~~l~~~-~G-~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~ 301 (393)
..+|.. +.+.+ ..|+ .++.. +| .||++..... .+..+.++. .........+...
T Consensus 206 yr~d~~--~~~~~~~~l~~pN-----------Gia~spDg~~lYvadt~~~-~I~~~~~~~---~g~l~~~~~~~~~--- 265 (355)
T 3sre_A 206 TYYSPN--DVRVVAEGFDFAN-----------GINISPDGKYVYIAELLAH-KIHVYEKHA---NWTLTPLRVLSFD--- 265 (355)
T ss_dssp EEECTT--CCEEEEEEESSEE-----------EEEECTTSSEEEEEEGGGT-EEEEEEECT---TSCEEEEEEEECS---
T ss_pred EEEECC--eEEEeecCCcccC-----------cceECCCCCEEEEEeCCCC-eEEEEEECC---CCcEecCEEEeCC---
Confidence 889874 23322 2222 23333 55 5666665433 555444443 2334444444331
Q ss_pred CCcceeeEEEEEe-CCcEEEE-EE-cCcEEEEEECC
Q 046902 302 RSFLFLRPLGYSR-NGVKLLL-EV-RREKLVWFDLE 334 (393)
Q Consensus 302 ~~~~~~~~~~~~~-~g~~i~l-~~-~~~~l~~yd~~ 334 (393)
....-+.+.. +|+ |++ .. ...+++.||++
T Consensus 266 ---g~PDGi~vD~e~G~-lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 266 ---TLVDNISVDPVTGD-LWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp ---SEEEEEEECTTTCC-EEEEEESCHHHHHSCCTT
T ss_pred ---CCCceEEEeCCCCc-EEEEecCCceEEEEECCC
Confidence 1234456665 465 555 33 22357777877
No 259
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=30.65 E-value=50 Score=21.55 Aligned_cols=15 Identities=13% Similarity=0.237 Sum_probs=13.9
Q ss_pred EEEEEECCCCcEEEE
Q 046902 327 KLVWFDLETNSLRTV 341 (393)
Q Consensus 327 ~l~~yd~~t~~~~~v 341 (393)
+++.||++++++..+
T Consensus 41 KIykyde~tNeI~Lk 55 (72)
T 3kvp_A 41 KIYEYNESRNEVKLK 55 (72)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCeEEEE
Confidence 799999999999877
No 260
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=30.14 E-value=2.6e+02 Score=23.98 Aligned_cols=199 Identities=10% Similarity=-0.035 Sum_probs=94.6
Q ss_pred eceEEEee-CCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCC
Q 046902 100 NGLIALCN-SVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTN 178 (393)
Q Consensus 100 ~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~ 178 (393)
+|.++..+ ....++++||.+++...++.+. ...++.+++.. . ++... ...+.+|+..++
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~---------~v~~i~~~~dg-~--l~v~~--------~~gl~~~d~~~g 119 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKTVHALPF---------MGSALAKISDS-K--QLIAS--------DDGLFLRDTATG 119 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEECSS---------CEEEEEEEETT-E--EEEEE--------TTEEEEEETTTC
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEECCC---------cceEEEEeCCC-e--EEEEE--------CCCEEEEECCCC
Confidence 45555544 3457999999998766554322 13445666543 2 22222 124788898888
Q ss_pred CeEEccccCcccccccccccccccccCceeEeCceEEEeccCC---CCCcEEEEEECCCceeeeecCCCcccccCCceeE
Q 046902 179 SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS---STRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHV 255 (393)
Q Consensus 179 ~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~---~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~ 255 (393)
..+.+...+... .......-.+.-+|.+|+-.... .....|..+| +.+...+. .... . ..
T Consensus 120 ~~~~~~~~~~~~--------~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~--~~~~---~--~~ 182 (326)
T 2ghs_A 120 VLTLHAELESDL--------PGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF--ADIS---I--PN 182 (326)
T ss_dssp CEEEEECSSTTC--------TTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE--EEES---S--EE
T ss_pred cEEEEeeCCCCC--------CCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee--CCCc---c--cC
Confidence 887664322100 00001111122367765433211 1235788998 45555432 1110 0 11
Q ss_pred EEEEe-CCe-EEEEEEcCCCeEEEEEEe-ecC-C-CCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE-cCcEEE
Q 046902 256 DVGSL-EGC-LCVFRFYNLVYVDMWMMK-EHA-V-KESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLV 329 (393)
Q Consensus 256 ~l~~~-~G~-L~~~~~~~~~~~~iW~l~-~~~-~-~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~ 329 (393)
.++.. +|+ |+++... ...+.+|.++ +.+ . ...- ....+... .....-+.+.++|. |++.. ....|.
T Consensus 183 ~i~~s~dg~~lyv~~~~-~~~I~~~d~~~~~Gl~~~~~~-~~~~~~~~-----~~~p~gi~~d~~G~-lwva~~~~~~v~ 254 (326)
T 2ghs_A 183 SICFSPDGTTGYFVDTK-VNRLMRVPLDARTGLPTGKAE-VFIDSTGI-----KGGMDGSVCDAEGH-IWNARWGEGAVD 254 (326)
T ss_dssp EEEECTTSCEEEEEETT-TCEEEEEEBCTTTCCBSSCCE-EEEECTTS-----SSEEEEEEECTTSC-EEEEEETTTEEE
T ss_pred CeEEcCCCCEEEEEECC-CCEEEEEEcccccCCcccCce-EEEECCCC-----CCCCCeeEECCCCC-EEEEEeCCCEEE
Confidence 33333 564 5665433 2255555443 111 1 0000 11112110 01223345555665 55554 345799
Q ss_pred EEECCCCcEEEEEE
Q 046902 330 WFDLETNSLRTVKI 343 (393)
Q Consensus 330 ~yd~~t~~~~~v~~ 343 (393)
.||++++..+.+..
T Consensus 255 ~~d~~g~~~~~i~~ 268 (326)
T 2ghs_A 255 RYDTDGNHIARYEV 268 (326)
T ss_dssp EECTTCCEEEEEEC
T ss_pred EECCCCCEEEEEEC
Confidence 99997776676654
No 261
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=30.06 E-value=3.9e+02 Score=25.88 Aligned_cols=161 Identities=7% Similarity=0.003 Sum_probs=82.9
Q ss_pred eEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeE---eCceEE
Q 046902 139 TFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL---AGGALH 215 (393)
Q Consensus 139 ~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~---~~G~ly 215 (393)
...++.||+..+ +|+.... ....+..++.....++.+..-. . ....++. .+|.||
T Consensus 350 ~~~~ld~d~~~~--~ly~sD~------~~~~I~r~~~~g~~~~~v~~~~------------~--~~p~GlAvD~~~~~lY 407 (619)
T 3s94_A 350 HAIAIDYDPVEG--YIYWTDD------EVRAIRRSFIDGSGSQFVVTAQ------------I--AHPDGIAVDWVARNLY 407 (619)
T ss_dssp SEEEEEEETTTT--EEEEEET------TTTEEEEEETTSCSCEEEECSS------------C--SCCCEEEEETTTTEEE
T ss_pred ccEEEEEEcCCC--eEEEEeC------CCCeEEEEEcCCCccEEEEECC------------C--CCcCceEEecccCcEE
Confidence 356788887654 3333221 2345666666555555442111 1 1222333 468999
Q ss_pred EeccCCCCCcEEEEEECCCceeeeecCCCcccccCCceeEEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEE
Q 046902 216 WVSPKSSTRSVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLF 293 (393)
Q Consensus 216 w~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~ 293 (393)
|.-. ....|.++++....-+.+.- ... .. ...|+.. +|.||+..... .-.|++..-+|... .
T Consensus 408 ~tD~---~~~~I~v~~~~G~~~~~l~~-~~l---~~--P~~iavdp~~G~ly~tD~g~--~~~I~r~~~dG~~~---~-- 471 (619)
T 3s94_A 408 WTDT---GTDRIEVTRLNGTMRKILIS-EDL---EE--PRAIVLDPMVGYMYWTDWGE--IPKIERAALDGSDR---V-- 471 (619)
T ss_dssp EEET---TTTEEEEEETTSCSCEEEEC-TTC---CS--EEEEEEETTTTEEEEEECSS--SCEEEEEETTSCSC---E--
T ss_pred EEeC---CCCcEEEEeCCCCeEEEEEE-CCC---CC--eeeEEEEcCCCcEEEecCCC--CCEEEEEccCCCcc---E--
Confidence 9843 35689999988654333321 111 11 1244444 68998887543 23455554333211 1
Q ss_pred EeeCCCCCCCcceeeEEEEEeCCcEEEEEEc-CcEEEEEECCCCcEEEE
Q 046902 294 SVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTV 341 (393)
Q Consensus 294 ~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd~~t~~~~~v 341 (393)
.+.... .....-+++..+++.||+... ..++..+|+++...+.+
T Consensus 472 ~l~~~~----l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~ 516 (619)
T 3s94_A 472 VLVNTS----LGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVL 516 (619)
T ss_dssp EEECSS----CSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE
T ss_pred EEEeCC----CCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 111111 112233455555667887753 34688888887766655
No 262
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=28.97 E-value=1.9e+02 Score=25.90 Aligned_cols=46 Identities=20% Similarity=0.179 Sum_probs=31.7
Q ss_pred EEEEeCCcEEEEEEcCcEEEEEECCCCcEEEE-EEecCCCCeeeeEEEE
Q 046902 310 LGYSRNGVKLLLEVRREKLVWFDLETNSLRTV-KIDTHGLDFVDTEICM 357 (393)
Q Consensus 310 ~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v-~~~~~~~~~~~~~~y~ 357 (393)
+-+.+.-++||+-++.+-++.||++|.+.-.. +| ...+-|-.+.|.
T Consensus 265 mqvs~kygviyviTK~G~ihlyDleTgt~i~~nrI--S~d~iF~ta~~~ 311 (365)
T 2xzh_A 265 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI--SGETIFVTAPHE 311 (365)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEEG
T ss_pred EEecccCCEEEEEeCCcEEEEEEcccCcEEEEecc--CCCceEEecccC
Confidence 34455446899988888899999999986544 44 444455555554
No 263
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.77 E-value=49 Score=22.04 Aligned_cols=20 Identities=10% Similarity=0.199 Sum_probs=14.9
Q ss_pred EEEEEcCcEEEEEECCCCcE
Q 046902 319 LLLEVRREKLVWFDLETNSL 338 (393)
Q Consensus 319 i~l~~~~~~l~~yd~~t~~~ 338 (393)
......++++|+||..|++-
T Consensus 23 ~~v~T~dGR~fyyN~~Tk~S 42 (73)
T 2dk7_A 23 CVVWTGDERVFFYNPTTRLS 42 (73)
T ss_dssp EEEEESSSCEEEEETTTTEE
T ss_pred EEEECCCCCEEEecCcccce
Confidence 44445566899999999973
No 264
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=27.81 E-value=3.7e+02 Score=24.93 Aligned_cols=97 Identities=13% Similarity=0.150 Sum_probs=56.0
Q ss_pred cEEEEEECCCceeeeecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCC
Q 046902 225 SVIVAFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRS 303 (393)
Q Consensus 225 ~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 303 (393)
..|..+|...+....+...... . ..+... +|++.+....+. .+.||-.+ + ..+.++....
T Consensus 448 ~~v~~w~~~~~~~~~~~~~~~~------v-~~~~~spd~~~las~~~d~-~i~iw~~~--~-----~~~~~~~~h~---- 508 (577)
T 2ymu_A 448 KTVKLWNRNGQLLQTLTGHSSS------V-RGVAFSPDGQTIASASDDK-TVKLWNRN--G-----QLLQTLTGHS---- 508 (577)
T ss_dssp SEEEEEETTSCEEEEEECCSSC------E-EEEEECTTSCEEEEEETTS-EEEEEETT--S-----CEEEEEECCS----
T ss_pred CEEEEEECCCCEEEEEcCCCCC------E-EEEEEcCCCCEEEEEeCCC-EEEEEcCC--C-----CEEEEEeCCC----
Confidence 4678888766555544322111 1 123322 677666555444 89999732 1 1223333211
Q ss_pred cceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEEE
Q 046902 304 FLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 304 ~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v 341 (393)
....-+++.++|..|+....++.+..||...+.+..+
T Consensus 509 -~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~ 545 (577)
T 2ymu_A 509 -SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL 545 (577)
T ss_dssp -SCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEE
T ss_pred -CCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEE
Confidence 1234567788888777777777899999877666655
No 265
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=27.44 E-value=3.3e+02 Score=24.21 Aligned_cols=66 Identities=12% Similarity=0.062 Sum_probs=39.1
Q ss_pred CCeEEEE-EEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEE--cCcEEEEEECCCCc
Q 046902 261 EGCLCVF-RFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEV--RREKLVWFDLETNS 337 (393)
Q Consensus 261 ~G~L~~~-~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~--~~~~l~~yd~~t~~ 337 (393)
++.+.++ ....+..+.||-+.. ......+.... ...-+.+.++++.++... .++.+..||..+.+
T Consensus 288 ~~~~la~~~gs~D~~I~iwd~~t------~~~~~~~~~~~------~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~ 355 (420)
T 4gga_A 288 QSNVLATGGGTSDRHIRIWNVCS------GACLSAVDAHS------QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA 355 (420)
T ss_dssp CTTEEEEEECTTTCEEEEEETTT------TEEEEEEECSS------CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred cccEEEEEeecCCCEEEEEeCCc------cccceeecccc------ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc
Confidence 4445444 344455899997653 23344444322 133445567778787765 34569999998876
Q ss_pred E
Q 046902 338 L 338 (393)
Q Consensus 338 ~ 338 (393)
.
T Consensus 356 ~ 356 (420)
T 4gga_A 356 K 356 (420)
T ss_dssp E
T ss_pred E
Confidence 4
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=26.62 E-value=3.7e+02 Score=25.73 Aligned_cols=55 Identities=11% Similarity=-0.001 Sum_probs=34.1
Q ss_pred eEeCceEEEeccCCCCCcEEEEEECCCcee-eeecCCCcccccCCceeEEEEEeCCeEEEEEEcC
Q 046902 208 VLAGGALHWVSPKSSTRSVIVAFDLVAEEF-YQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFYN 271 (393)
Q Consensus 208 v~~~G~lyw~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~~ 271 (393)
+..+|.+|.-.. ...+.+||..+.+- -.+++|..... . +..-+.+|++|++....
T Consensus 494 ~tagglvf~g~~----dg~l~A~D~~tG~~lW~~~~~~g~~a--~---P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 494 ATAGNLVFTGTG----DGYFKAFDAKSGKELWKFQTGSGIVS--P---PITWEQDGEQYLGVTVG 549 (582)
T ss_dssp EETTTEEEEECT----TSEEEEEETTTCCEEEEEECSSCCCS--C---CEEEEETTEEEEEEEEC
T ss_pred EeCCCEEEEECC----CCcEEEEECCCCCEEEEecCCCCccc--C---ceEEEECCEEEEEEEcc
Confidence 456777777432 36899999987543 23566655431 1 12224799999987543
No 267
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=26.60 E-value=1.3e+02 Score=26.78 Aligned_cols=117 Identities=8% Similarity=0.060 Sum_probs=55.5
Q ss_pred eceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC
Q 046902 100 NGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS 179 (393)
Q Consensus 100 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~ 179 (393)
+|+|++...+..++-.|..||+.+.--.... .. + .+.........+-.++.+.. ...-.+..|+..+|.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~-~~-p----~~~~~~~~~~~~~~~~vv~p-----~~dG~l~a~~~~~G~ 78 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPEN-FQ-P----LIEIQEPSRLETYETLIIEP-----FGDGNIYYFNAHQGL 78 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGG-SC-C----SEECCCSCTTTSSEEEEECC-----STTTEEEEEETTTEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCc-cC-C----cEEecCCccccCCcEEEEEE-----CCCCEEEEEECCCCc
Confidence 5777777777788888888876332111000 00 0 00100000011112222210 023456777777776
Q ss_pred eEEccccCcccccccccccccccccCceeE-------eCceEEEeccCCCCCcEEEEEECCCcee
Q 046902 180 WRRISNLPRFLRDFYDYLYHSLFRKGYGVL-------AGGALHWVSPKSSTRSVIVAFDLVAEEF 237 (393)
Q Consensus 180 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~-------~~G~lyw~~~~~~~~~~il~fD~~~e~~ 237 (393)
|+--..++..... ... .....+|. .+|.+|.-... ..+.++|+.+.+-
T Consensus 79 ~~~~~~~~~lv~~-----SP~-~~~~~pvv~~~~~~~~~g~Vy~Gs~~----g~l~ald~~tG~~ 133 (339)
T 2be1_A 79 QKLPLSIRQLVST-----SPL-HLKTNIVVNDSGKIVEDEKVYTGSMR----TIMYTINMLNGEI 133 (339)
T ss_dssp EEEEEEHHHHHTT-----CSE-EEECC----------CCEEEEECEEE----EEEEEEETTTCCE
T ss_pred EEeeeccccceec-----ccc-ccCCCceeecccccccCCEEEEEecC----CEEEEEECCCCcE
Confidence 6532222210000 001 11333455 78999987665 7899999987653
No 268
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=25.82 E-value=3.5e+02 Score=23.95 Aligned_cols=107 Identities=12% Similarity=0.120 Sum_probs=52.9
Q ss_pred CcEEEEEECCC--ceeeeecCCC-cccccCCceeEEEEEe-CC-eEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCC
Q 046902 224 RSVIVAFDLVA--EEFYQLPLPD-SVNVSYANVHVDVGSL-EG-CLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEP 298 (393)
Q Consensus 224 ~~~il~fD~~~--e~~~~i~lP~-~~~~~~~~~~~~l~~~-~G-~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~ 298 (393)
...|..+|+.+ ..+..+.+.+ .... ....-..+.-. +| .+.+.+..+. .+.||-+........-. ..+...
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~--~~~~~~ 272 (447)
T 3dw8_B 197 DLRINLWHLEITDRSFNIVDIKPANMEE-LTEVITAAEFHPNSCNTFVYSSSKG-TIRLCDMRASALCDRHS--KLFEEP 272 (447)
T ss_dssp SSEEEEEETTEEEEEEEEEECCCSSGGG-CCCCEEEEEECSSCTTEEEEEETTS-CEEEEETTTCSSSCTTC--EEECCC
T ss_pred CCeEEEEECCCCCceeeeeecccccccc-cCcceEEEEECCCCCcEEEEEeCCC-eEEEEECcCCcccccee--eEeccC
Confidence 46789999983 2334333222 1110 11111123322 45 6666665544 89999887422100001 112211
Q ss_pred CCCC-------CcceeeEEEEEeCCcEEEEEEcCcEEEEEECCC
Q 046902 299 TPTR-------SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLET 335 (393)
Q Consensus 299 ~~~~-------~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t 335 (393)
.... ......-+.+.++|..|+.... ..+..||+.+
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred CCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 0000 0002445677788877776666 7899999986
No 269
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=25.74 E-value=4.7e+02 Score=25.43 Aligned_cols=146 Identities=9% Similarity=0.043 Sum_probs=79.7
Q ss_pred ccEEEEEEeCC------C--CeEEccccCcccccccccccccccccCceeEe-CceEEEeccCCCCCcEEEEEECCCc--
Q 046902 167 DVEVEVYSLKT------N--SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA-GGALHWVSPKSSTRSVIVAFDLVAE-- 235 (393)
Q Consensus 167 ~~~~~Vyss~t------~--~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~-~G~lyw~~~~~~~~~~il~fD~~~e-- 235 (393)
...+.+++..+ + .++.+..-. .. ....+.. ++.+|+.+........|..+|+.+.
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~----------~~----~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 323 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNF----------EG----EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE 323 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSS----------SS----CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred ccEEEEEECcccccccCCccceEEeeCCC----------Cc----EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 45778888865 4 577664321 00 1112333 4567777654333568999999875
Q ss_pred -eeeeecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEE
Q 046902 236 -EFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYS 313 (393)
Q Consensus 236 -~~~~i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~ 313 (393)
.|+.+-.+... .. .-.+... ++.|.+...... ...||+++-.. +. ....+.... ....-+++.
T Consensus 324 ~~~~~l~~~~~~----~~-~~~~~~~~~~~lv~~~~~~g-~~~l~~~~~~~--g~--~~~~l~~~~-----~~v~~~~~s 388 (710)
T 2xdw_A 324 SKWKVLVPEHEK----DV-LEWVACVRSNFLVLCYLHDV-KNTLQLHDLAT--GA--LLKIFPLEV-----GSVVGYSGQ 388 (710)
T ss_dssp GGCEEEECCCSS----CE-EEEEEEETTTEEEEEEEETT-EEEEEEEETTT--CC--EEEEECCCS-----SEEEEEECC
T ss_pred ccceeccCCCCC----Ce-EEEEEEEcCCEEEEEEEECC-EEEEEEEECCC--CC--EEEecCCCC-----ceEEEEecC
Confidence 46665332221 01 1133444 777777665544 66677776311 11 234454321 112234445
Q ss_pred eCCcEEEEEEcC----cEEEEEECCCCc--EEEE
Q 046902 314 RNGVKLLLEVRR----EKLVWFDLETNS--LRTV 341 (393)
Q Consensus 314 ~~g~~i~l~~~~----~~l~~yd~~t~~--~~~v 341 (393)
++++.+++...+ ..++.||+++++ .+.+
T Consensus 389 ~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l 422 (710)
T 2xdw_A 389 KKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVF 422 (710)
T ss_dssp TTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEE
T ss_pred CCCCEEEEEEeCCCCCCEEEEEECCCCccceEEe
Confidence 677777776432 469999999987 5555
No 270
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=25.32 E-value=4e+02 Score=25.67 Aligned_cols=80 Identities=15% Similarity=0.246 Sum_probs=0.0
Q ss_pred EEEEEEeCCCC--eEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeee-ecCCCc
Q 046902 169 EVEVYSLKTNS--WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPLPDS 245 (393)
Q Consensus 169 ~~~Vyss~t~~--W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~lP~~ 245 (393)
.+..++..+++ |+.-...| ......+..+|.+|.-..+ ..|.+||..+.+-.. .++|..
T Consensus 454 ~l~A~D~~tG~~~W~~~~~~~--------------~~~g~~~tagg~vf~gt~d----g~l~A~D~~tG~~lW~~~l~~g 515 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKMERFA--------------VWGGTMATAGDLVFYGTLD----GYLKARDSDTGDLLWKFKIPSG 515 (599)
T ss_dssp EEEEECTTTCCEEEEEEESSC--------------CCSBCEEETTTEEEEECTT----SEEEEEETTTCCEEEEEECSSC
T ss_pred eEEEEECCCCCEEeEecCCCC--------------ccCcceEecCCEEEEECCC----CeEEEEECCCCCEEEEeeCCCC
Q ss_pred ccccCCceeEEEEEeCCeEEEEEEcC
Q 046902 246 VNVSYANVHVDVGSLEGCLCVFRFYN 271 (393)
Q Consensus 246 ~~~~~~~~~~~l~~~~G~L~~~~~~~ 271 (393)
... .+..-+.+|++|++....
T Consensus 516 ~~~-----~P~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 516 AIG-----YPMTYTHKGTQYVAIYYG 536 (599)
T ss_dssp CCS-----CCEEEEETTEEEEEEEEC
T ss_pred cEe-----ccEEEEeCCEEEEEEEcc
No 271
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=25.30 E-value=2.9e+02 Score=22.89 Aligned_cols=138 Identities=7% Similarity=0.012 Sum_probs=66.9
Q ss_pred cEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEeCceEEEeccCCCCCcEEEEEECCCceeeee-cCCCcc
Q 046902 168 VEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIVAFDLVAEEFYQL-PLPDSV 246 (393)
Q Consensus 168 ~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~ 246 (393)
..+.|++..++.-...-... .+......-...-+|.....+.. ...|..+|+.+++.... .....
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~----------~~~~~V~~v~~~~~~~~l~sgs~---Dg~v~iw~~~~~~~~~~~~~h~~- 110 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQME----------QPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKRLRNMTSHSA- 110 (318)
T ss_dssp TEEEEEETTTCCEEEEEECC----------STTCCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEECCSS-
T ss_pred CEEEEEECCCCCEEEEEEec----------CCCCeEEEEEECCCCCEEEEEEC---CCcEEEeecCCceeEEEecCccc-
Confidence 46899999988654332111 00000001111124444333332 35788899988765332 22111
Q ss_pred cccCCceeEEEEEeCCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCc
Q 046902 247 NVSYANVHVDVGSLEGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRRE 326 (393)
Q Consensus 247 ~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~ 326 (393)
.......++.+.+...... .+.+|.... ....+..+.... .....+.+..+|..++....++
T Consensus 111 -------~~~~~~~~~~~l~s~~~~~-~~~~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~s~~~d~ 172 (318)
T 4ggc_A 111 -------RVGSLSWNSYILSSGSRSG-HIHHHDVRV-----AEHHVATLSGHS-----QEVCGLRWAPDGRHLASGGNDN 172 (318)
T ss_dssp -------CEEEEEEETTEEEEEETTS-EEEEEETTS-----SSCEEEEEECCS-----SCEEEEEECTTSSEEEEEETTS
T ss_pred -------eEEEeecCCCEEEEEecCC-ceEeeecCC-----CceeEEEEcCcc-----CceEEEEEcCCCCEEEEEecCc
Confidence 1122333455544444433 666665442 112222222211 1233455556777666666666
Q ss_pred EEEEEECCCCc
Q 046902 327 KLVWFDLETNS 337 (393)
Q Consensus 327 ~l~~yd~~t~~ 337 (393)
.+..||+++++
T Consensus 173 ~i~iwd~~~~~ 183 (318)
T 4ggc_A 173 LVNVWPSAPGE 183 (318)
T ss_dssp CEEEEESSCBT
T ss_pred ceeEEECCCCc
Confidence 78889988754
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=23.69 E-value=4.2e+02 Score=24.14 Aligned_cols=108 Identities=7% Similarity=0.054 Sum_probs=56.1
Q ss_pred eceEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCCC
Q 046902 100 NGLIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTNS 179 (393)
Q Consensus 100 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~~ 179 (393)
+|.|.+.+....+.+.+|.+++...+.... ....++.+|+..+ ++..... . ......+..++. .+.
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~--------~~P~giavd~dG~---lyVad~~-~-~~~~~gv~~~~~-~~~ 217 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYVDIKTTNI--------GQCADVNFTLNGD---MVVVDDQ-S-SDTNTGIYLFTR-ASG 217 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEEEEECCCC--------SCEEEEEECTTCC---EEEEECC-S-CTTSEEEEEECG-GGT
T ss_pred CCEEEEEeCCCCEEEEECCCCEEEEeecCC--------CCccEEEECCCCC---EEEEcCC-C-CcccceEEEEEC-CCC
Confidence 577777764467889999888877664422 2245677787655 3322211 0 001122333332 222
Q ss_pred eEEccccCcccccccccccccccccCceeEe---CceEEEeccCCCCCcEEEEEECCCcee
Q 046902 180 WRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIVAFDLVAEEF 237 (393)
Q Consensus 180 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~e~~ 237 (393)
|.....++ .. ....++.+ +|.+|+.... ...|..||..+...
T Consensus 218 ~~~~~~~~-----------~~--~~P~giavd~~~G~lyv~d~~---~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 218 FTERLSLC-----------NA--RGAKTCAVHPQNGKIYYTRYH---HAMISSYDPATGTL 262 (433)
T ss_dssp TCCEEEEE-----------EC--SSBCCCEECTTTCCEEECBTT---CSEEEEECTTTCCE
T ss_pred eecccccc-----------cc--CCCCEEEEeCCCCeEEEEECC---CCEEEEEECCCCeE
Confidence 32100011 01 11223333 6899987543 45899999986665
No 273
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=23.36 E-value=6.2e+02 Score=26.03 Aligned_cols=98 Identities=10% Similarity=0.077 Sum_probs=53.9
Q ss_pred cEEE-EEECCCceeeeecCCCcccccCCceeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCC
Q 046902 225 SVIV-AFDLVAEEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTR 302 (393)
Q Consensus 225 ~~il-~fD~~~e~~~~i~lP~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~ 302 (393)
..+. .+|+.+.....+. +... . ...+... +|+..++..... .+.+|-++. ..-..+ +....
T Consensus 358 ~~l~~~~d~~~~~~~~l~-~~~~-----~-~~~~~~SpDG~~la~~~~~~-~v~~~d~~t----g~~~~~--~~~~~--- 420 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE-ENLG-----N-VFAMGVDRNGKFAVVANDRF-EIMTVDLET----GKPTVI--ERSRE--- 420 (1045)
T ss_dssp EEEEEEEETTTCCEEECC-CCCC-----S-EEEEEECTTSSEEEEEETTS-EEEEEETTT----CCEEEE--EECSS---
T ss_pred CceEEEEECCCCCceEec-CCcc-----c-eeeeEECCCCCEEEEECCCC-eEEEEECCC----CceEEe--ccCCC---
Confidence 5788 8898887665554 2211 1 1123333 676655554433 777776652 222222 21110
Q ss_pred CcceeeEEEEEeCCcEEEEEEcC----------cEEEEEECCCCcEEEE
Q 046902 303 SFLFLRPLGYSRNGVKLLLEVRR----------EKLVWFDLETNSLRTV 341 (393)
Q Consensus 303 ~~~~~~~~~~~~~g~~i~l~~~~----------~~l~~yd~~t~~~~~v 341 (393)
.....+.++++|..|+..... ..++.||+++++...+
T Consensus 421 --~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 421 --AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp --SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC
T ss_pred --CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe
Confidence 112346778888877665432 3699999999875544
No 274
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=22.91 E-value=4.1e+02 Score=23.74 Aligned_cols=101 Identities=11% Similarity=0.025 Sum_probs=61.9
Q ss_pred cEEEEE--ECCCceeeeecC---C--CcccccCCceeEEEEEe--CCeEEEEEEcCCCeEEEEEEeecCCC-CCeEEEEE
Q 046902 225 SVIVAF--DLVAEEFYQLPL---P--DSVNVSYANVHVDVGSL--EGCLCVFRFYNLVYVDMWMMKEHAVK-ESWTKLFS 294 (393)
Q Consensus 225 ~~il~f--D~~~e~~~~i~l---P--~~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~-~~W~~~~~ 294 (393)
..|..| |..+..+..+.- | ... ...+.+.+... .|+++++.......+..|.|.+.+.. -.=+++.+
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~---~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAI---NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCC---SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCC---CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 456666 667888888743 4 221 12222344323 57888888776678999999875421 12245667
Q ss_pred eeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECC
Q 046902 295 VQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLE 334 (393)
Q Consensus 295 i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~ 334 (393)
+.+.. ...-+.+.+..+.||+.-.+..+..||.+
T Consensus 176 f~lgs------q~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 176 FKMNS------QTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EECSS------CEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred ecCCC------CcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 77642 12233444556789998777779999955
No 275
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=22.77 E-value=3.7e+02 Score=23.21 Aligned_cols=213 Identities=9% Similarity=-0.015 Sum_probs=95.1
Q ss_pred eEEEeeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecC---------------CCC
Q 046902 102 LIALCNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGN---------------DGD 166 (393)
Q Consensus 102 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~---------------~~~ 166 (393)
.|.+......++++|+.|++.+.+-..+ . .......+..++.. . .++.+...... ...
T Consensus 94 ~l~~~~~~~~l~~~d~~~g~~~~~~~~~--~---~~~~~~~~~~~~dg-~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (388)
T 3pe7_A 94 ALFYVKDGRNLMRVDLATLEENVVYQVP--A---EWVGYGTWVANSDC-T-KLVGIEIRREDWVPLTDWKKFHEFYFTKP 166 (388)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECC--T---TEEEEEEEEECTTS-S-EEEEEEEEGGGCCCCCSHHHHHHHGGGCC
T ss_pred EEEEEeCCCeEEEEECCCCcceeeeech--h---hcccccceeECCCC-C-eeccccccCcccccccccchhhhhhccCC
Confidence 4555544568999999999876654333 0 11111222233332 2 23332211100 112
Q ss_pred ccEEEEEEeCCCCeEEccccCcccccccccccccccccCceeEe-Cce-EEEeccCC--CCCcEEEEEECCCceeeeecC
Q 046902 167 DVEVEVYSLKTNSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA-GGA-LHWVSPKS--STRSVIVAFDLVAEEFYQLPL 242 (393)
Q Consensus 167 ~~~~~Vyss~t~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~-~G~-lyw~~~~~--~~~~~il~fD~~~e~~~~i~l 242 (393)
...+.+++..++.-+.+...+. ........- +|. +.+..... .....|..+|+.+.....+.-
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~~-------------~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQENQ-------------WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEESS-------------CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC
T ss_pred cceEEEEECCCCceEEeecCCc-------------cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee
Confidence 3577888888876555432110 001111222 343 33333221 113478889987766555432
Q ss_pred CCcccccCCceeEEEEE-eCCe-EEEEEEcCC-CeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEE
Q 046902 243 PDSVNVSYANVHVDVGS-LEGC-LCVFRFYNL-VYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKL 319 (393)
Q Consensus 243 P~~~~~~~~~~~~~l~~-~~G~-L~~~~~~~~-~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i 319 (393)
.... .......- -+|+ |+++..... ....||+++-.. ..-..+...+-.. ..........+.++|..|
T Consensus 234 ~~~~-----~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~--g~~~~l~~~~~~~--~~~~~~~~~~~spdg~~l 304 (388)
T 3pe7_A 234 HAEG-----ESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET--LENRQLTSMPACS--HLMSNYDGSLMVGDGSDA 304 (388)
T ss_dssp CCTT-----EEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT--CCEEEEEEECCEE--EEEECTTSSEEEEEECCC
T ss_pred CCCC-----cccccceECCCCCEEEEEecCCCCCcceEEEEecCC--CceEEEEcCCCce--eeeecCCCCeEccCCCcc
Confidence 1110 00112222 2665 555544322 233455555322 2223333322100 000001112466777766
Q ss_pred EEEE---------cCcEEEEEECCCCcEEEEEE
Q 046902 320 LLEV---------RREKLVWFDLETNSLRTVKI 343 (393)
Q Consensus 320 ~l~~---------~~~~l~~yd~~t~~~~~v~~ 343 (393)
++.. ....++.+|+++++.+.+.-
T Consensus 305 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 337 (388)
T 3pe7_A 305 PVDVQDDSGYKIENDPFLYVFNMKNGTQHRVAR 337 (388)
T ss_dssp ------------CCCCEEEEEETTTTEEEEEEE
T ss_pred eeEeeeccccccCCCCEEEEEeccCCceEEecc
Confidence 6542 23469999999999887744
No 276
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=22.76 E-value=3.6e+02 Score=23.04 Aligned_cols=154 Identities=14% Similarity=0.075 Sum_probs=74.0
Q ss_pred eceEEE-eeCCceEEEEeccccceeccCCCCCCCCCCCCceEEEEeeeCCCCCeEEEEEEEeecCCCCccEEEEEEeCCC
Q 046902 100 NGLIAL-CNSVQELALFNPSTRKLKTLPLPPCLVGFPSAFTFYGFGQDKINDDYKLVRVLHFKGNDGDDVEVEVYSLKTN 178 (393)
Q Consensus 100 ~GLl~~-~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~Vyss~t~ 178 (393)
+|-+++ ...+..+.+||..+++...+-... . ......+.+.|.. ++++.+. ....+.+|+.+++
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~----~--~~~i~~~~~~pdg---~~lasg~------~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAK----S--DVEYSSGVLHKDS---LLLALYS------PDGILDVYNLSSP 202 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCC----S--SCCCCEEEECTTS---CEEEEEC------TTSCEEEEESSCT
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecC----C--CCceEEEEECCCC---CEEEEEc------CCCEEEEEECCCC
Confidence 443333 445678999999988775433222 0 1112345566543 2333332 2346889999877
Q ss_pred CeE--EccccCcccccccccccccccccCceeEe--CceEEEeccCCCCCcEEEEEECCCceeee-ecC-CCcccccCCc
Q 046902 179 SWR--RISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIVAFDLVAEEFYQ-LPL-PDSVNVSYAN 252 (393)
Q Consensus 179 ~W~--~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~e~~~~-i~l-P~~~~~~~~~ 252 (393)
.-. .+.. . +. ..-..+.. +|..-..+.. ..|..+|+.+..-.. +.. ...... ...
T Consensus 203 ~~~~~~~~~-~-----------h~--~~v~~l~fs~~g~~l~s~~~----~~v~iwd~~~~~~~~~~~~~~~~~~~-~~~ 263 (343)
T 3lrv_A 203 DQASSRFPV-D-----------EE--AKIKEVKFADNGYWMVVECD----QTVVCFDLRKDVGTLAYPTYTIPEFK-TGT 263 (343)
T ss_dssp TSCCEECCC-C-----------TT--SCEEEEEECTTSSEEEEEES----SBEEEEETTSSTTCBSSCCCBC------CC
T ss_pred CCCccEEec-c-----------CC--CCEEEEEEeCCCCEEEEEeC----CeEEEEEcCCCCcceeeccccccccc-ccc
Confidence 532 1111 0 00 01112222 3443333332 378999998754321 211 000000 000
Q ss_pred eeEEEEEe-CCeEEEEEEcCCCeEEEEEEeecCCCCCeEE
Q 046902 253 VHVDVGSL-EGCLCVFRFYNLVYVDMWMMKEHAVKESWTK 291 (393)
Q Consensus 253 ~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~ 291 (393)
..+.-. +|+..+++......+.||.++.. ...|..
T Consensus 264 --~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~--~~~~~~ 299 (343)
T 3lrv_A 264 --VTYDIDDSGKNMIAYSNESNSLTIYKFDKK--TKNWTK 299 (343)
T ss_dssp --EEEEECTTSSEEEEEETTTTEEEEEEECTT--TCSEEE
T ss_pred --eEEEECCCCCEEEEecCCCCcEEEEEEccc--ccceEe
Confidence 112222 67666665553458999999753 356987
No 277
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=21.88 E-value=3.9e+02 Score=23.06 Aligned_cols=121 Identities=16% Similarity=0.194 Sum_probs=59.4
Q ss_pred CceEEEeccC-CCCCcEEEEEECCCceeeeecCCCcccccC-C-ceeEEEEEe-CCeEEEEEEcC----CCeEEEEEEee
Q 046902 211 GGALHWVSPK-SSTRSVIVAFDLVAEEFYQLPLPDSVNVSY-A-NVHVDVGSL-EGCLCVFRFYN----LVYVDMWMMKE 282 (393)
Q Consensus 211 ~G~lyw~~~~-~~~~~~il~fD~~~e~~~~i~lP~~~~~~~-~-~~~~~l~~~-~G~L~~~~~~~----~~~~~iW~l~~ 282 (393)
+|.+|.-... ......|..+| +.+. .+.|....... . ..-..+... +|+|+++.... ...+.+|-++.
T Consensus 27 ~g~~~v~~~~~~~~~~~l~~~~--~g~~--~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t 102 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPEMQVAELT--QDGL--IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN 102 (343)
T ss_dssp TSCEEEEECGGGCCSCSEEEEE--TTEE--EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT
T ss_pred CCCEEEEeCCCCCCceEEEEEC--CCCe--ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC
Confidence 5777665321 11113577777 4433 34443211000 0 111244443 68999987541 12544444331
Q ss_pred cCCCCCeEEEEEeeCCCC-CCCcceeeEEEEEeCCcEEEEEEc----CcEEEEEECCCCcEEEE
Q 046902 283 HAVKESWTKLFSVQEPTP-TRSFLFLRPLGYSRNGVKLLLEVR----REKLVWFDLETNSLRTV 341 (393)
Q Consensus 283 ~~~~~~W~~~~~i~~~~~-~~~~~~~~~~~~~~~g~~i~l~~~----~~~l~~yd~~t~~~~~v 341 (393)
.. .+.++.+... ........-+++.++++.+|+... ...++.||+++++..++
T Consensus 103 ----g~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 103 ----NQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV 160 (343)
T ss_dssp ----TE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE
T ss_pred ----Ce--EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE
Confidence 22 2334443211 111112345677755567887653 35799999998876654
No 278
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=21.88 E-value=2.7e+02 Score=25.30 Aligned_cols=68 Identities=9% Similarity=0.128 Sum_probs=39.8
Q ss_pred CeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEEE
Q 046902 262 GCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 262 G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v 341 (393)
+.+.+.+..+. .+.||-++.. ......... .....-++++++|..|+....++.+..||++.+....+
T Consensus 162 ~~~las~s~Dg-~v~iwD~~~~------~~~~~~~~~-----~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 162 PSMVAVCLADG-SIAVLQVTET------VKVCATLPS-----TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVI 229 (434)
T ss_dssp TTEEEEEETTS-CEEEEEESSS------EEEEEEECG-----GGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEE
T ss_pred CCEEEEEECCC-eEEEEEcCCC------cceeeccCC-----CCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccc
Confidence 45555554443 8888987641 122211110 01234567778888888887777899999985444433
No 279
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=21.82 E-value=5.2e+02 Score=24.51 Aligned_cols=64 Identities=13% Similarity=0.235 Sum_probs=42.7
Q ss_pred CCeEEEEEEcCCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEcCcEEEEEECCC
Q 046902 261 EGCLCVFRFYNLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLET 335 (393)
Q Consensus 261 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t 335 (393)
+|++.+....+. .+.||.++. ............. ...-+++.++|..++....+..+..||..+
T Consensus 459 dg~~lasgs~D~-~v~lwd~~~----~~~~~~~~~~h~~------~v~~v~fspdg~~las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 459 DKQFVAVGGQDS-KVHVYKLSG----ASVSEVKTIVHPA------EITSVAFSNNGAFLVATDQSRKVIPYSVAN 522 (611)
T ss_dssp TSCEEEEEETTS-EEEEEEEET----TEEEEEEEEECSS------CEEEEEECTTSSEEEEEETTSCEEEEEGGG
T ss_pred CCCEEEEeCCCC-eEEEEEccC----CceeeeeccCCCC------ceEEEEECCCCCEEEEEcCCCCEEEEEcCC
Confidence 677666666544 999999874 2333333333221 245678888988777777777799999887
No 280
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=21.69 E-value=5.5e+02 Score=24.81 Aligned_cols=103 Identities=14% Similarity=0.047 Sum_probs=49.4
Q ss_pred EEEEEECCC-ceeeeecCCCcccccCCceeEEEEEeCCeEEEEEEc-CCCeEEEEEEeecCCCCCeEEEEEeeCCCCCCC
Q 046902 226 VIVAFDLVA-EEFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFRFY-NLVYVDMWMMKEHAVKESWTKLFSVQEPTPTRS 303 (393)
Q Consensus 226 ~il~fD~~~-e~~~~i~lP~~~~~~~~~~~~~l~~~~G~L~~~~~~-~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 303 (393)
.|..+|+.+ .+...+..+.... ..-..+.. ..+..|++.... ......||..+-.. .....+..-....+..
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~- 337 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQD--IYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS--NQQRVLAHETSPTWVP- 337 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSS--EEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT--CCEEEEEEEECSSCCC-
T ss_pred EEEEEECCCCCceEEecCCCCcc--eEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC--CceEEEEEcCCCCcCC-
Confidence 688889888 7766665442111 01112334 333445555542 22356666666322 3344433322211100
Q ss_pred cceeeEEEEEeCCcEEEEEEcCc--EEEEEECCCC
Q 046902 304 FLFLRPLGYSRNGVKLLLEVRRE--KLVWFDLETN 336 (393)
Q Consensus 304 ~~~~~~~~~~~~g~~i~l~~~~~--~l~~yd~~t~ 336 (393)
....+.+.++|..++....+. +|+.+|++++
T Consensus 338 --~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~ 370 (741)
T 2ecf_A 338 --LHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK 370 (741)
T ss_dssp --CCSCCEECTTSCEEEEECTTSSCEEEEECSSSC
T ss_pred --cCCceEECCCCeEEEEecCCCccEEEEEcCCCC
Confidence 112346677777444443332 5778887665
No 281
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.41 E-value=1.8e+02 Score=25.42 Aligned_cols=32 Identities=19% Similarity=0.063 Sum_probs=25.3
Q ss_pred EEEEeCCcEEEEEEcCcEEEEEECCCCcEEEE
Q 046902 310 LGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 341 (393)
Q Consensus 310 ~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v 341 (393)
..+.++|..|++......++.+|+++++.+.+
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 34567888887776666799999999987766
No 282
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=21.25 E-value=2.4e+02 Score=25.29 Aligned_cols=69 Identities=10% Similarity=-0.038 Sum_probs=45.5
Q ss_pred eEEEEEEcCC--CeEEEEEEeecCCCCCeEEEEEeeCCCCCCCcceeeEEEEEeCCcEEEEEEc----------CcEEEE
Q 046902 263 CLCVFRFYNL--VYVDMWMMKEHAVKESWTKLFSVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR----------REKLVW 330 (393)
Q Consensus 263 ~L~~~~~~~~--~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~g~~i~l~~~----------~~~l~~ 330 (393)
++|+...... .. .|++++- ..++.+.+|+.... . -+.+.++|..+|+... ++.+..
T Consensus 33 ~~yV~~~~~~~~~d-~vsvID~----~t~~v~~~i~vG~~------P-~i~~spDg~~lyVan~~~~r~~~G~~~~~Vsv 100 (368)
T 1mda_H 33 RSHITLPAYFAGTT-ENWVSCA----GCGVTLGHSLGAFL------S-LAVAGHSGSDFALASTSFARSAKGKRTDYVEV 100 (368)
T ss_dssp EEEEEECTTTCSSE-EEEEEET----TTTEEEEEEEECTT------C-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEE
T ss_pred eEEEECCccCCccc-eEEEEEC----CCCeEEEEEeCCCC------C-ceEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 4455444332 23 7777773 45788888886431 2 3677789999999852 346999
Q ss_pred EECCCCcE-EEEEE
Q 046902 331 FDLETNSL-RTVKI 343 (393)
Q Consensus 331 yd~~t~~~-~~v~~ 343 (393)
+|+.|.+. .+|.+
T Consensus 101 iD~~T~~vv~~I~v 114 (368)
T 1mda_H 101 FDPVTFLPIADIEL 114 (368)
T ss_dssp ECTTTCCEEEEEEE
T ss_pred EECCCCCEEEEEEC
Confidence 99999874 45655
No 283
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=21.00 E-value=4.3e+02 Score=23.33 Aligned_cols=31 Identities=26% Similarity=0.278 Sum_probs=21.2
Q ss_pred eEEEEEeCCcEEEEEEcCcEEEEEECCCCcEE
Q 046902 308 RPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 339 (393)
Q Consensus 308 ~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~ 339 (393)
.-+++. ++..|+-...++.+..||+++++..
T Consensus 333 ~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 333 STISVS-NDKILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp CCEEEE-TTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred EEEEEC-CceEEEecCCCCeEEEEECCCcccc
Confidence 345666 5555555555678999999998743
No 284
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=20.47 E-value=2.9e+02 Score=25.89 Aligned_cols=49 Identities=20% Similarity=0.202 Sum_probs=32.7
Q ss_pred eeeEEEEEeCCcEEEEEEcCcEEEEEECCCCcEEEE-EEecCCCCeeeeEEE
Q 046902 306 FLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV-KIDTHGLDFVDTEIC 356 (393)
Q Consensus 306 ~~~~~~~~~~g~~i~l~~~~~~l~~yd~~t~~~~~v-~~~~~~~~~~~~~~y 356 (393)
+..-+-+++.-++||+.++.+-++.||++|.+.-.. +| ...+-|-.+.+
T Consensus 260 FPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrI--s~~~iF~t~~~ 309 (494)
T 1bpo_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI--SGETIFVTAPH 309 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEE
T ss_pred ceeEEEecccCCEEEEEecCceEEEEecccceeeeeecc--cCCceEEeccc
Confidence 333344455557899998888899999999985544 34 44445554444
Done!