Query 046905
Match_columns 225
No_of_seqs 181 out of 1234
Neff 9.4
Searched_HMMs 13730
Date Mon Mar 25 09:34:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046905.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046905hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2astb2 c.10.1.3 (B:2136-2419) 99.2 1.2E-12 8.5E-17 104.8 2.9 175 20-213 44-235 (284)
2 d2astb2 c.10.1.3 (B:2136-2419) 99.2 6.4E-13 4.6E-17 106.3 0.9 150 45-213 44-210 (284)
3 d1p9ag_ c.10.2.7 (G:) von Will 99.2 7.8E-11 5.7E-15 92.9 12.0 174 15-215 24-207 (266)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.0 1.7E-09 1.3E-13 86.3 12.6 122 84-216 148-285 (305)
5 d2omxa2 c.10.2.1 (A:37-235) In 99.0 5.8E-10 4.2E-14 84.1 9.0 80 19-123 37-117 (199)
6 d1h6ta2 c.10.2.1 (A:31-240) In 99.0 9.5E-10 6.9E-14 83.6 9.9 159 19-211 43-208 (210)
7 d1h6ua2 c.10.2.1 (A:36-262) In 99.0 1.6E-09 1.1E-13 83.1 10.2 175 20-211 39-225 (227)
8 d2omxa2 c.10.2.1 (A:37-235) In 98.9 3E-09 2.2E-13 80.0 9.4 138 20-207 60-198 (199)
9 d1ozna_ c.10.2.7 (A:) Reticulo 98.9 1.7E-08 1.2E-12 79.8 12.6 190 16-214 26-236 (284)
10 d2omza2 c.10.2.1 (A:33-416) In 98.8 7E-09 5.1E-13 84.7 10.0 150 17-213 214-383 (384)
11 d1h6ua2 c.10.2.1 (A:36-262) In 98.8 1.2E-08 8.5E-13 78.1 10.2 181 18-215 15-207 (227)
12 d1ogqa_ c.10.2.8 (A:) Polygala 98.8 3.1E-08 2.3E-12 79.2 13.1 61 149-215 219-280 (313)
13 d1h6ta2 c.10.2.1 (A:31-240) In 98.8 8.1E-09 5.9E-13 78.3 8.8 141 44-215 43-190 (210)
14 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.8 5.2E-08 3.8E-12 74.8 12.6 47 15-62 22-69 (242)
15 d2omza2 c.10.2.1 (A:33-416) In 98.6 7.2E-08 5.2E-12 78.5 10.5 163 19-215 194-363 (384)
16 d1xkua_ c.10.2.7 (A:) Decorin 98.6 9.7E-08 7E-12 75.9 11.0 90 82-190 191-283 (305)
17 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.6 5E-08 3.6E-12 74.9 8.1 180 6-210 39-232 (242)
18 d1ozna_ c.10.2.7 (A:) Reticulo 98.6 8.1E-08 5.9E-12 75.7 9.4 39 146-188 196-234 (284)
19 d1p9ag_ c.10.2.7 (G:) von Will 98.5 2E-07 1.5E-11 72.7 8.5 155 5-189 40-205 (266)
20 d1m9la_ c.10.3.1 (A:) Outer ar 98.4 3E-09 2.2E-13 80.1 -3.4 125 23-190 24-151 (198)
21 d1a9na_ c.10.2.4 (A:) Spliceso 98.4 2.5E-07 1.8E-11 67.1 7.2 105 83-210 38-146 (162)
22 d1dcea3 c.10.2.2 (A:444-567) R 98.4 3.9E-07 2.9E-11 63.0 7.6 76 25-123 1-76 (124)
23 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.4 2.5E-07 1.8E-11 68.8 6.8 116 15-162 22-137 (192)
24 d1a9na_ c.10.2.4 (A:) Spliceso 98.4 6.9E-07 5.1E-11 64.6 8.5 129 21-185 17-145 (162)
25 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.3 2.6E-06 1.9E-10 63.0 9.5 109 85-214 28-137 (192)
26 d1ogqa_ c.10.2.8 (A:) Polygala 98.2 2.9E-06 2.1E-10 67.3 9.7 83 23-124 51-137 (313)
27 d1dcea3 c.10.2.2 (A:444-567) R 98.1 2.8E-06 2E-10 58.5 7.0 96 4-123 6-101 (124)
28 d2ifga3 c.10.2.7 (A:36-191) Hi 98.0 1.7E-05 1.3E-09 56.6 8.4 86 109-213 28-113 (156)
29 d1m9la_ c.10.3.1 (A:) Outer ar 97.9 6.6E-07 4.8E-11 66.9 0.5 106 19-162 45-151 (198)
30 d1jl5a_ c.10.2.6 (A:) Leucine 97.8 5.2E-05 3.8E-09 60.0 10.1 76 22-128 38-113 (353)
31 d1jl5a_ c.10.2.6 (A:) Leucine 97.6 0.00023 1.7E-08 56.1 10.6 71 110-211 282-352 (353)
32 d2ifga3 c.10.2.7 (A:36-191) Hi 97.6 7.9E-05 5.8E-09 53.0 7.0 68 44-129 28-96 (156)
33 d1z7xw1 c.10.1.1 (W:1-460) Rib 96.3 0.00063 4.6E-08 55.3 2.2 117 47-190 2-123 (460)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 96.1 0.00076 5.5E-08 54.8 1.4 34 23-56 3-37 (460)
35 d1koha1 c.10.2.3 (A:201-362) m 93.2 0.018 1.3E-06 40.4 2.1 64 84-163 63-127 (162)
36 d1koha1 c.10.2.3 (A:201-362) m 92.5 0.012 9.1E-07 41.2 0.3 94 43-159 61-154 (162)
37 d2ca6a1 c.10.1.2 (A:2-345) Rna 92.4 0.01 7.6E-07 46.6 -0.2 37 177-214 241-284 (344)
38 d1pgva_ c.10.1.1 (A:) Tropomod 86.2 0.063 4.6E-06 37.5 -0.1 37 86-123 44-83 (167)
39 d1io0a_ c.10.1.1 (A:) Tropomod 80.8 0.17 1.2E-05 35.1 0.2 38 85-123 45-85 (166)
40 d2ca6a1 c.10.1.2 (A:2-345) Rna 79.7 0.2 1.5E-05 38.8 0.4 144 21-189 157-312 (344)
41 d1pgva_ c.10.1.1 (A:) Tropomod 70.4 0.28 2E-05 34.0 -1.0 113 84-212 13-140 (167)
42 d1igra2 c.10.2.5 (A:300-478) T 24.8 47 0.0034 22.5 4.5 27 85-117 49-79 (179)
No 1
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=1.2e-12 Score=104.76 Aligned_cols=175 Identities=17% Similarity=0.134 Sum_probs=101.7
Q ss_pred cccCccEEEEeeCCccccCCHhHHHhccCCcEEEE-eccccceEeccCCcccccccccccccccccccccceEeccCccC
Q 046905 20 LFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCKK 98 (225)
Q Consensus 20 ~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~~ 98 (225)
...+|++|+++++.........++..+++|++|.+ +|. +..... .....+++|++|++++|.+
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~-l~~~~~---------------~~l~~~~~L~~L~Ls~c~~ 107 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLR-LSDPIV---------------NTLAKNSNLVRLNLSGCSG 107 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCB-CCHHHH---------------HHHTTCTTCSEEECTTCBS
T ss_pred cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccC-CCcHHH---------------HHHhcCCCCcCcccccccc
Confidence 35589999998765433322334567899999999 774 221100 1122356777777777777
Q ss_pred ccccCCchHHhhcccCCEEEEecCcccccc-----ccccc--CCCCCcccc----cc----cccccccccceeecCcCCC
Q 046905 99 LMNLVPSSVAKSLERLVTLRVSGCSAMTQV-----VASCD--QGDSDVAGA----NL----EEEILFSKLRYMTMLDLEN 163 (225)
Q Consensus 99 L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l-----~~~~~--~~~~~~~~~----~~----~~~~~~p~L~~L~l~~~~~ 163 (225)
+++......+..+++|++|+|++|.++..- ..... -.....++. .. .-...+|+|++|++.+|+.
T Consensus 108 itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~ 187 (284)
T d2astb2 108 FSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 187 (284)
T ss_dssp CCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT
T ss_pred ccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccC
Confidence 665422333456777777777777654321 00000 000001110 00 1123468899999999988
Q ss_pred cceeecCCCccceeCCCccEEEEeCCCCCcee-cCCCCCCCCeeEEEecCC
Q 046905 164 LTSFCSGVVDYTFKFPSLEDLIVTGCCNMKIF-TSGDLITPKRVDAWYSES 213 (225)
Q Consensus 164 L~~~~~~~~~~~~~~p~L~~L~I~~C~~L~~l-p~~~~~~~~L~~l~i~~~ 213 (225)
++.-... ....+|+|++|++.+|..++.- ...+...|+|+.+++.++
T Consensus 188 itd~~~~---~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 188 LKNDCFQ---EFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp CCGGGGG---GGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCchhhh---hhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 7643322 1245789999999999887632 122356788999988643
No 2
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=6.4e-13 Score=106.34 Aligned_cols=150 Identities=13% Similarity=0.102 Sum_probs=84.0
Q ss_pred hccCCcEEEE-eccccceEeccCCcccccccccccccccccccccceEeccCccCccccCCchHHhhcccCCEEEEecCc
Q 046905 45 VLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCKKLMNLVPSSVAKSLERLVTLRVSGCS 123 (225)
Q Consensus 45 ~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C~ 123 (225)
...+|++|++ +|.--.+. +......+++|++|.+.+|+ +.+.. ...+..+++|++|++++|.
T Consensus 44 ~~~~L~~LdLs~~~i~~~~---------------l~~l~~~c~~L~~L~L~~~~-l~~~~-~~~l~~~~~L~~L~Ls~c~ 106 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVST---------------LHGILSQCSKLQNLSLEGLR-LSDPI-VNTLAKNSNLVRLNLSGCS 106 (284)
T ss_dssp CCBCCCEEECTTCEECHHH---------------HHHHHTTBCCCSEEECTTCB-CCHHH-HHHHTTCTTCSEEECTTCB
T ss_pred cCCCCCEEECCCCccCHHH---------------HHHHHHhCCCcccccccccC-CCcHH-HHHHhcCCCCcCccccccc
Confidence 4678999999 76411110 01123358999999999994 54432 2445678999999999998
Q ss_pred cccccccc----c-c-CCCCCcccc---cc----c-ccccccccceeecCcCC-CcceeecCCCccceeCCCccEEEEeC
Q 046905 124 AMTQVVAS----C-D-QGDSDVAGA---NL----E-EEILFSKLRYMTMLDLE-NLTSFCSGVVDYTFKFPSLEDLIVTG 188 (225)
Q Consensus 124 ~L~~l~~~----~-~-~~~~~~~~~---~~----~-~~~~~p~L~~L~l~~~~-~L~~~~~~~~~~~~~~p~L~~L~I~~ 188 (225)
++...... . . -...+.++. .. . .....+.|+.|.+.+|. ++..-.... ....+|+|++|++.+
T Consensus 107 ~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~--l~~~~~~L~~L~L~~ 184 (284)
T d2astb2 107 GFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLST--LVRRCPNLVHLDLSD 184 (284)
T ss_dssp SCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHH--HHHHCTTCSEEECTT
T ss_pred cccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhcccccccccccccc--ccccccccccccccc
Confidence 76532100 0 0 000001100 00 0 00112445555555442 222111000 123579999999999
Q ss_pred CCCCce-ecCCCCCCCCeeEEEecCC
Q 046905 189 CCNMKI-FTSGDLITPKRVDAWYSES 213 (225)
Q Consensus 189 C~~L~~-lp~~~~~~~~L~~l~i~~~ 213 (225)
|+.++. ....+..+++|+++.+..+
T Consensus 185 ~~~itd~~~~~l~~~~~L~~L~L~~C 210 (284)
T d2astb2 185 SVMLKNDCFQEFFQLNYLQHLSLSRC 210 (284)
T ss_dssp CTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred ccCCCchhhhhhcccCcCCEEECCCC
Confidence 998873 3334467899999999764
No 3
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=7.8e-11 Score=92.91 Aligned_cols=174 Identities=17% Similarity=0.131 Sum_probs=113.4
Q ss_pred ccccccccCccEEEEeeCCccccCCHhHHHhccCCcEEEEeccccceEeccCCcccccccccccccccccccccceEecc
Q 046905 15 DFPRHLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHLSCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVF 94 (225)
Q Consensus 15 ~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~ 94 (225)
.+|.+..+++++|+++++. +..+|...+.++++|++|+++-..+..++... .+++|+.|+++
T Consensus 24 ~iP~~lp~~l~~L~Ls~N~-i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~~~-----------------~l~~L~~L~Ls 85 (266)
T d1p9ag_ 24 ALPPDLPKDTTILHLSENL-LYTFSLATLMPYTRLTQLNLDRAELTKLQVDG-----------------TLPVLGTLDLS 85 (266)
T ss_dssp SCCSCCCTTCCEEECTTSC-CSEEEGGGGTTCTTCCEEECTTSCCCEEECCS-----------------CCTTCCEEECC
T ss_pred eeCcCcCcCCCEEECcCCc-CCCcCHHHhhcccccccccccccccccccccc-----------------ccccccccccc
Confidence 3565555799999999754 45566555778999999999333677765422 36778888887
Q ss_pred CccCccccCCchHHhhcccCCEEEEecCcccccccccccCCCC-----C-----cccccccccccccccceeecCcCCCc
Q 046905 95 SCKKLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDS-----D-----VAGANLEEEILFSKLRYMTMLDLENL 164 (225)
Q Consensus 95 ~C~~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~-----~-----~~~~~~~~~~~~p~L~~L~l~~~~~L 164 (225)
++ .++.. +.....+++|+.|++.++.. ..+.......-. . ...........+++|+.|.+.++ ++
T Consensus 86 ~N-~l~~~--~~~~~~l~~L~~L~l~~~~~-~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N-~l 160 (266)
T d1p9ag_ 86 HN-QLQSL--PLLGQTLPALTVLDVSFNRL-TSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN-NL 160 (266)
T ss_dssp SS-CCSSC--CCCTTTCTTCCEEECCSSCC-CCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS-CC
T ss_pred cc-ccccc--cccccccccccccccccccc-ceeeccccccccccccccccccccceeccccccccccchhcccccc-cc
Confidence 76 34443 23456677788888777652 222211110000 0 00111122345678888888776 56
Q ss_pred ceeecCCCccceeCCCccEEEEeCCCCCceecCCCCCCCCeeEEEecCCce
Q 046905 165 TSFCSGVVDYTFKFPSLEDLIVTGCCNMKIFTSGDLITPKRVDAWYSESAC 215 (225)
Q Consensus 165 ~~~~~~~~~~~~~~p~L~~L~I~~C~~L~~lp~~~~~~~~L~~l~i~~~~~ 215 (225)
+.+..+. ...+++|++|+++++ +|+.+|.+...+++|+.|.+.++.|
T Consensus 161 ~~~~~~~---~~~l~~L~~L~Ls~N-~L~~lp~~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 161 TELPAGL---LNGLENLDTLLLQEN-SLYTIPKGFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp SCCCTTT---TTTCTTCCEEECCSS-CCCCCCTTTTTTCCCSEEECCSCCB
T ss_pred cccCccc---cccccccceeecccC-CCcccChhHCCCCCCCEEEecCCCC
Confidence 6665432 245899999999998 5999999888899999999986543
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.02 E-value=1.7e-09 Score=86.35 Aligned_cols=122 Identities=11% Similarity=0.072 Sum_probs=70.7
Q ss_pred cccccceEeccCccCccccCCchHHhhcccCCEEEEecCcccccccccccCCC----CC-----cccccccccccccccc
Q 046905 84 SFGNLTHLVVFSCKKLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGD----SD-----VAGANLEEEILFSKLR 154 (225)
Q Consensus 84 ~l~~L~~L~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~----~~-----~~~~~~~~~~~~p~L~ 154 (225)
.+++|+.+.+.++. +..+. ...+++|++|++.++......+..-.... .. ...........+++|+
T Consensus 148 ~l~~L~~l~l~~n~-l~~l~----~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~ 222 (305)
T d1xkua_ 148 GMKKLSYIRIADTN-ITTIP----QGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLR 222 (305)
T ss_dssp GCTTCCEEECCSSC-CCSCC----SSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCC
T ss_pred cccccCccccccCC-ccccC----cccCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccce
Confidence 34567777777663 33331 12356777777776653322211100000 00 0111123344678889
Q ss_pred eeecCcCCCcceeecCCCccceeCCCccEEEEeCCCCCceecCCC-------CCCCCeeEEEecCCcee
Q 046905 155 YMTMLDLENLTSFCSGVVDYTFKFPSLEDLIVTGCCNMKIFTSGD-------LITPKRVDAWYSESACC 216 (225)
Q Consensus 155 ~L~l~~~~~L~~~~~~~~~~~~~~p~L~~L~I~~C~~L~~lp~~~-------~~~~~L~~l~i~~~~~~ 216 (225)
+|++.++ +++.++.+. ..+++|++|+++++ +++.++... ...++|+.+.++++.|.
T Consensus 223 ~L~L~~N-~L~~lp~~l----~~l~~L~~L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 223 ELHLNNN-KLVKVPGGL----ADHKYIQVVYLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp EEECCSS-CCSSCCTTT----TTCSSCCEEECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred eeecccc-ccccccccc----ccccCCCEEECCCC-ccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 9998888 677775432 45889999999987 688776421 34577888998877663
No 5
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.01 E-value=5.8e-10 Score=84.07 Aligned_cols=80 Identities=13% Similarity=0.210 Sum_probs=48.7
Q ss_pred ccccCccEEEEeeCCccccCCHhHHHhccCCcEEEE-eccccceEeccCCcccccccccccccccccccccceEeccCcc
Q 046905 19 HLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCK 97 (225)
Q Consensus 19 ~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~ 97 (225)
..+.+++.|.+.++.. ..+.. ++.+++|++|++ ++ .+..+... ..+++|+.|++.++.
T Consensus 37 ~~l~~l~~L~l~~~~i-~~l~~--l~~l~nL~~L~Ls~N-~l~~~~~l-----------------~~l~~L~~L~l~~n~ 95 (199)
T d2omxa2 37 TDLDQVTTLQADRLGI-KSIDG--VEYLNNLTQINFSNN-QLTDITPL-----------------KNLTKLVDILMNNNQ 95 (199)
T ss_dssp HHHTTCCEEECTTSCC-CCCTT--GGGCTTCCEEECCSS-CCCCCGGG-----------------TTCTTCCEEECCSSC
T ss_pred HHhcCCCEEECCCCCC-CCccc--cccCCCcCcCccccc-cccCcccc-----------------cCCcccccccccccc
Confidence 3477889999887653 33332 567899999999 55 45554322 235666666666663
Q ss_pred CccccCCchHHhhcccCCEEEEecCc
Q 046905 98 KLMNLVPSSVAKSLERLVTLRVSGCS 123 (225)
Q Consensus 98 ~L~~l~~~~~~~~l~~L~~L~I~~C~ 123 (225)
+..+ .....+++|+.|++.+|.
T Consensus 96 -~~~~---~~l~~l~~L~~L~l~~~~ 117 (199)
T d2omxa2 96 -IADI---TPLANLTNLTGLTLFNNQ 117 (199)
T ss_dssp -CCCC---GGGTTCTTCSEEECCSSC
T ss_pred -cccc---cccccccccccccccccc
Confidence 2322 124456666666666654
No 6
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.00 E-value=9.5e-10 Score=83.57 Aligned_cols=159 Identities=13% Similarity=0.129 Sum_probs=97.8
Q ss_pred ccccCccEEEEeeCCccccCCHhHHHhccCCcEEEE-eccccceEeccCCcccccccccccccccccccccceEeccCcc
Q 046905 19 HLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCK 97 (225)
Q Consensus 19 ~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~ 97 (225)
..+.+|+.|.+.++.. ..++. ++.+++|++|++ ++ .+..+.. ...+++|+.|+++++
T Consensus 43 ~~L~~L~~L~l~~~~i-~~l~~--l~~l~~L~~L~L~~n-~i~~l~~-----------------~~~l~~L~~L~l~~n- 100 (210)
T d1h6ta2 43 NELNSIDQIIANNSDI-KSVQG--IQYLPNVTKLFLNGN-KLTDIKP-----------------LANLKNLGWLFLDEN- 100 (210)
T ss_dssp HHHHTCCEEECTTSCC-CCCTT--GGGCTTCCEEECCSS-CCCCCGG-----------------GTTCTTCCEEECCSS-
T ss_pred HHhcCccEEECcCCCC-CCchh--HhhCCCCCEEeCCCc-cccCccc-----------------cccCccccccccccc-
Confidence 3477889998887653 33433 577899999999 54 4554432 123677888888777
Q ss_pred CccccCCchHHhhcccCCEEEEecCcccccccccccCCCC---Cccc---ccccccccccccceeecCcCCCcceeecCC
Q 046905 98 KLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDS---DVAG---ANLEEEILFSKLRYMTMLDLENLTSFCSGV 171 (225)
Q Consensus 98 ~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~---~~~~---~~~~~~~~~p~L~~L~l~~~~~L~~~~~~~ 171 (225)
+++.+ .....+++|+.|++.+|.. ..+......... ..+. ........+++|+.+.+.++ .++.+..
T Consensus 101 ~i~~l---~~l~~l~~L~~L~l~~~~~-~~~~~l~~l~~l~~l~~~~n~l~~~~~~~~l~~L~~l~l~~n-~l~~i~~-- 173 (210)
T d1h6ta2 101 KVKDL---SSLKDLKKLKSLSLEHNGI-SDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDN-QISDIVP-- 173 (210)
T ss_dssp CCCCG---GGGTTCTTCCEEECTTSCC-CCCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSS-CCCCCGG--
T ss_pred ccccc---ccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccc-ccccccc--
Confidence 45554 2345677888888877752 222111100000 0000 01123445778888888776 3444432
Q ss_pred CccceeCCCccEEEEeCCCCCceecCCCCCCCCeeEEEec
Q 046905 172 VDYTFKFPSLEDLIVTGCCNMKIFTSGDLITPKRVDAWYS 211 (225)
Q Consensus 172 ~~~~~~~p~L~~L~I~~C~~L~~lp~~~~~~~~L~~l~i~ 211 (225)
...+++|++|++++| +++.+|. +..+++|+.|++.
T Consensus 174 ---l~~l~~L~~L~Ls~N-~i~~l~~-l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 174 ---LAGLTKLQNLYLSKN-HISDLRA-LAGLKNLDVLELF 208 (210)
T ss_dssp ---GTTCTTCCEEECCSS-CCCBCGG-GTTCTTCSEEEEE
T ss_pred ---ccCCCCCCEEECCCC-CCCCChh-hcCCCCCCEEEcc
Confidence 135899999999988 6888873 5678999999874
No 7
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.97 E-value=1.6e-09 Score=83.13 Aligned_cols=175 Identities=12% Similarity=0.079 Sum_probs=91.8
Q ss_pred cccCccEEEEeeCCccccCCHhHHHhccCCcEEEE-eccccceEeccCCcccc-c--ccccc--cccccccccccceEec
Q 046905 20 LFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SCTSYKEIFSNEGCLES-H--VGVSK--LALIKISFGNLTHLVV 93 (225)
Q Consensus 20 ~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c~~l~~~~~~~~~~~~-~--l~~~~--l~~~~~~l~~L~~L~i 93 (225)
.+.+|+.|.+.++.. ..++. ++++++|++|++ ++ .+..+......... . +.... -.+....+++|+.+.+
T Consensus 39 ~l~~L~~L~l~~~~i-~~l~~--l~~l~~L~~L~ls~n-~i~~~~~l~~l~~l~~l~~~~n~~~~i~~l~~l~~L~~l~l 114 (227)
T d1h6ua2 39 DLDGITTLSAFGTGV-TTIEG--VQYLNNLIGLELKDN-QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDL 114 (227)
T ss_dssp HHHTCCEEECTTSCC-CCCTT--GGGCTTCCEEECCSS-CCCCCGGGTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEEC
T ss_pred HcCCcCEEECCCCCC-Ccchh--HhcCCCCcEeecCCc-eeecccccccccccccccccccccccccccccccccccccc
Confidence 466777777776543 33432 567778888777 44 34433322222110 0 00000 0112334566777777
Q ss_pred cCccCccccCCchHHhhcccCCEEEEecCcccccccccccCCCC---Cccc---ccccccccccccceeecCcCCCccee
Q 046905 94 FSCKKLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDS---DVAG---ANLEEEILFSKLRYMTMLDLENLTSF 167 (225)
Q Consensus 94 ~~C~~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~---~~~~---~~~~~~~~~p~L~~L~l~~~~~L~~~ 167 (225)
.+|.... . ......+.++.+.+.+|.- ............ ..+. ........+++|+.|.+.++ +++++
T Consensus 115 ~~~~~~~-~---~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~L~~L~l~~n~~~~~~~l~~l~~L~~L~Ls~n-~l~~l 188 (227)
T d1h6ua2 115 TSTQITD-V---TPLAGLSNLQVLYLDLNQI-TNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDN-KISDI 188 (227)
T ss_dssp TTSCCCC-C---GGGTTCTTCCEEECCSSCC-CCCGGGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSS-CCCCC
T ss_pred ccccccc-c---chhccccchhhhhchhhhh-chhhhhccccccccccccccccccchhhcccccceecccCCC-ccCCC
Confidence 6664321 1 1223345555555544431 111110000000 0000 00123456789999999887 56665
Q ss_pred ecCCCccceeCCCccEEEEeCCCCCceecCCCCCCCCeeEEEec
Q 046905 168 CSGVVDYTFKFPSLEDLIVTGCCNMKIFTSGDLITPKRVDAWYS 211 (225)
Q Consensus 168 ~~~~~~~~~~~p~L~~L~I~~C~~L~~lp~~~~~~~~L~~l~i~ 211 (225)
.. ...+++|++|++++| +++.++. +..+++|+.+.++
T Consensus 189 ~~-----l~~l~~L~~L~Ls~N-~lt~i~~-l~~l~~L~~L~ls 225 (227)
T d1h6ua2 189 SP-----LASLPNLIEVHLKNN-QISDVSP-LANTSNLFIVTLT 225 (227)
T ss_dssp GG-----GGGCTTCCEEECTTS-CCCBCGG-GTTCTTCCEEEEE
T ss_pred hh-----hcCCCCCCEEECcCC-cCCCCcc-cccCCCCCEEEee
Confidence 43 235899999999998 6888874 5688999999885
No 8
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.91 E-value=3e-09 Score=80.01 Aligned_cols=138 Identities=15% Similarity=0.191 Sum_probs=67.2
Q ss_pred cccCccEEEEeeCCccccCCHhHHHhccCCcEEEE-eccccceEeccCCcccccccccccccccccccccceEeccCccC
Q 046905 20 LFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCKK 98 (225)
Q Consensus 20 ~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~~ 98 (225)
.|++|++|+++++.. ..++. +.++++|++|++ ++ .+..++. ...+++|+.|++.+|..
T Consensus 60 ~l~nL~~L~Ls~N~l-~~~~~--l~~l~~L~~L~l~~n-~~~~~~~-----------------l~~l~~L~~L~l~~~~~ 118 (199)
T d2omxa2 60 YLNNLTQINFSNNQL-TDITP--LKNLTKLVDILMNNN-QIADITP-----------------LANLTNLTGLTLFNNQI 118 (199)
T ss_dssp GCTTCCEEECCSSCC-CCCGG--GTTCTTCCEEECCSS-CCCCCGG-----------------GTTCTTCSEEECCSSCC
T ss_pred cCCCcCcCccccccc-cCccc--ccCCccccccccccc-ccccccc-----------------ccccccccccccccccc
Confidence 456666666665432 22322 345666666666 33 2222221 12355666666665543
Q ss_pred ccccCCchHHhhcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCcCCCcceeecCCCccceeC
Q 046905 99 LMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLDLENLTSFCSGVVDYTFKF 178 (225)
Q Consensus 99 L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~~~~L~~~~~~~~~~~~~~ 178 (225)
.. . .....+++|+.|+++++. +..++ ....+++|+.|.+.++ +++.+.. ...+
T Consensus 119 ~~-~---~~~~~l~~L~~L~l~~n~-l~~~~----------------~l~~~~~L~~L~l~~n-~l~~l~~-----l~~l 171 (199)
T d2omxa2 119 TD-I---DPLKNLTNLNRLELSSNT-ISDIS----------------ALSGLTSLQQLNFSSN-QVTDLKP-----LANL 171 (199)
T ss_dssp CC-C---GGGTTCTTCSEEECCSSC-CCCCG----------------GGTTCTTCSEEECCSS-CCCCCGG-----GTTC
T ss_pred cc-c---cccchhhhhHHhhhhhhh-hcccc----------------cccccccccccccccc-cccCCcc-----ccCC
Confidence 22 1 123456666666666553 32221 2234556666666554 2333321 1235
Q ss_pred CCccEEEEeCCCCCceecCCCCCCCCeeE
Q 046905 179 PSLEDLIVTGCCNMKIFTSGDLITPKRVD 207 (225)
Q Consensus 179 p~L~~L~I~~C~~L~~lp~~~~~~~~L~~ 207 (225)
++|++|+++++ +++.++. +..+++|++
T Consensus 172 ~~L~~L~ls~N-~i~~i~~-l~~L~~L~~ 198 (199)
T d2omxa2 172 TTLERLDISSN-KVSDISV-LAKLTNLES 198 (199)
T ss_dssp TTCCEEECCSS-CCCCCGG-GGGCTTCSE
T ss_pred CCCCEEECCCC-CCCCCcc-ccCCCCCCc
Confidence 66666666666 4555542 344555554
No 9
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=1.7e-08 Score=79.75 Aligned_cols=190 Identities=9% Similarity=0.021 Sum_probs=104.8
Q ss_pred cccccccCccEEEEeeCCccccCCHhHHHhccCCcEEEEeccccceEeccCCccc---cccc------cccc-ccccccc
Q 046905 16 FPRHLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHLSCTSYKEIFSNEGCLE---SHVG------VSKL-ALIKISF 85 (225)
Q Consensus 16 ~~~~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l~c~~l~~~~~~~~~~~---~~l~------~~~l-~~~~~~l 85 (225)
+|.....++++|+|+++. ++.+|...+..+++|++|+++...+..+........ ..+. ...+ +.....+
T Consensus 26 iP~~ip~~~~~L~Ls~N~-i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l 104 (284)
T d1ozna_ 26 VPVGIPAASQRIFLHGNR-ISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGL 104 (284)
T ss_dssp CCTTCCTTCSEEECTTSC-CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTC
T ss_pred cCCCCCCCCCEEECcCCc-CCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhccc
Confidence 455556689999999754 566776667889999999995556666644321110 0010 0112 1234557
Q ss_pred cccceEeccCccCccccCCchHHhhcccCCEEEEecCcccccccccccCCC-----CCcc-----cccccccccccccce
Q 046905 86 GNLTHLVVFSCKKLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGD-----SDVA-----GANLEEEILFSKLRY 155 (225)
Q Consensus 86 ~~L~~L~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~-----~~~~-----~~~~~~~~~~p~L~~ 155 (225)
++|+.|++.++.. ..+. ......+++|+.+++.+.. ++.++....... .+.+ .........+++|+.
T Consensus 105 ~~L~~L~l~~n~~-~~~~-~~~~~~~~~L~~l~l~~N~-l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~ 181 (284)
T d1ozna_ 105 GRLHTLHLDRCGL-QELG-PGLFRGLAALQYLYLQDNA-LQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDR 181 (284)
T ss_dssp TTCCEEECTTSCC-CCCC-TTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred ccCCEEecCCccc-cccc-ccccchhcccchhhhcccc-ccccChhHhccccchhhcccccCcccccchhhhccccccch
Confidence 8899999988853 3332 3344567888888888764 655543211100 0000 001112223455555
Q ss_pred eecCcCCCcceeecCCCccceeCCCccEEEEeCCCCCceecC-CCCCCCCeeEEEecCCc
Q 046905 156 MTMLDLENLTSFCSGVVDYTFKFPSLEDLIVTGCCNMKIFTS-GDLITPKRVDAWYSESA 214 (225)
Q Consensus 156 L~l~~~~~L~~~~~~~~~~~~~~p~L~~L~I~~C~~L~~lp~-~~~~~~~L~~l~i~~~~ 214 (225)
+.+.++. +..+... ....+++|++|+++++. +..++. .+..+++|++|+++++.
T Consensus 182 l~l~~N~-l~~i~~~---~f~~l~~L~~L~l~~N~-i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 182 LLLHQNR-VAHVHPH---AFRDLGRLMTLYLFANN-LSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp EECCSSC-CCEECTT---TTTTCTTCCEEECCSSC-CSCCCHHHHTTCTTCCEEECCSSC
T ss_pred hhhhhcc-ccccChh---Hhhhhhhcccccccccc-cccccccccccccccCEEEecCCC
Confidence 5555443 2223221 12346778888887763 444443 34567788888887543
No 10
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.83 E-value=7e-09 Score=84.73 Aligned_cols=150 Identities=15% Similarity=0.170 Sum_probs=93.5
Q ss_pred ccccccCccEEEEeeCCccccCCHhHHHhccCCcEEEE-eccccceEeccCCcccccccccccccccccccccceEeccC
Q 046905 17 PRHLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFS 95 (225)
Q Consensus 17 ~~~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~ 95 (225)
|.+..++|++|.+.++.. ..++. +..+++|+.|++ ++ .+..++... .+++|+.|++++
T Consensus 214 ~~~~~~~L~~L~l~~n~l-~~~~~--l~~l~~L~~L~l~~n-~l~~~~~~~-----------------~~~~L~~L~l~~ 272 (384)
T d2omza2 214 PLGILTNLDELSLNGNQL-KDIGT--LASLTNLTDLDLANN-QISNLAPLS-----------------GLTKLTELKLGA 272 (384)
T ss_dssp GGGGCTTCCEEECCSSCC-CCCGG--GGGCTTCSEEECCSS-CCCCCGGGT-----------------TCTTCSEEECCS
T ss_pred cccccCCCCEEECCCCCC-CCcch--hhcccccchhccccC-ccCCCCccc-----------------ccccCCEeeccC
Confidence 345678999999988653 34443 577899999999 55 344443322 244555555544
Q ss_pred ccCccccCC-------------------chHHhhcccCCEEEEecCcccccccccccCCCCCccccccccccccccccee
Q 046905 96 CKKLMNLVP-------------------SSVAKSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYM 156 (225)
Q Consensus 96 C~~L~~l~~-------------------~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L 156 (225)
++ +..+.. ......+++++.|+++++. +..+ .....+|+|++|
T Consensus 273 ~~-l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~-l~~l----------------~~l~~l~~L~~L 334 (384)
T d2omza2 273 NQ-ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNN-ISDI----------------SPVSSLTKLQRL 334 (384)
T ss_dssp SC-CCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSC-CSCC----------------GGGGGCTTCCEE
T ss_pred cc-cCCCCccccccccccccccccccccccccchhcccCeEECCCCC-CCCC----------------cccccCCCCCEE
Confidence 42 222200 0122344455555554442 3322 134578999999
Q ss_pred ecCcCCCcceeecCCCccceeCCCccEEEEeCCCCCceecCCCCCCCCeeEEEecCC
Q 046905 157 TMLDLENLTSFCSGVVDYTFKFPSLEDLIVTGCCNMKIFTSGDLITPKRVDAWYSES 213 (225)
Q Consensus 157 ~l~~~~~L~~~~~~~~~~~~~~p~L~~L~I~~C~~L~~lp~~~~~~~~L~~l~i~~~ 213 (225)
.+.++ +++.+.. ...+|+|++|+++++ +++.++. +..+++|+.++++++
T Consensus 335 ~L~~n-~l~~l~~-----l~~l~~L~~L~l~~N-~l~~l~~-l~~l~~L~~L~L~~N 383 (384)
T d2omza2 335 FFANN-KVSDVSS-----LANLTNINWLSAGHN-QISDLTP-LANLTRITQLGLNDQ 383 (384)
T ss_dssp ECCSS-CCCCCGG-----GGGCTTCCEEECCSS-CCCBCGG-GTTCTTCSEEECCCE
T ss_pred ECCCC-CCCCChh-----HcCCCCCCEEECCCC-cCCCChh-hccCCCCCEeeCCCC
Confidence 99998 5665542 235899999999887 6777764 567899999999765
No 11
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.82 E-value=1.2e-08 Score=78.09 Aligned_cols=181 Identities=11% Similarity=0.111 Sum_probs=92.7
Q ss_pred cccccCccEEEEeeCCccccCCHhHHHhccCCcEEEE-eccccceEeccCCccc---cccccccc--ccccccccccceE
Q 046905 18 RHLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SCTSYKEIFSNEGCLE---SHVGVSKL--ALIKISFGNLTHL 91 (225)
Q Consensus 18 ~~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c~~l~~~~~~~~~~~---~~l~~~~l--~~~~~~l~~L~~L 91 (225)
...+.++..+.+......+..+ ...+.+|++|++ +| +++++...+.+.. -.+....+ ......+++|+.+
T Consensus 15 d~~l~~~~~~~l~~~~~~d~~~---~~~l~~L~~L~l~~~-~i~~l~~l~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l 90 (227)
T d1h6ua2 15 DPALANAIKIAAGKSNVTDTVT---QADLDGITTLSAFGT-GVTTIEGVQYLNNLIGLELKDNQITDLAPLKNLTKITEL 90 (227)
T ss_dssp SHHHHHHHHHHTTCSSTTSEEC---HHHHHTCCEEECTTS-CCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEE
T ss_pred CHHHHHHHHHHhCCCCcCCcCC---HHHcCCcCEEECCCC-CCCcchhHhcCCCCcEeecCCceeecccccccccccccc
Confidence 3345554444443333223222 467899999999 66 3554422111110 00111111 1123345666666
Q ss_pred eccCccCccccCCchHHhhcccCCEEEEecCcccccccccccCCCC---Cccc--c-cccccccccccceeecCcCCCcc
Q 046905 92 VVFSCKKLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDS---DVAG--A-NLEEEILFSKLRYMTMLDLENLT 165 (225)
Q Consensus 92 ~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~---~~~~--~-~~~~~~~~p~L~~L~l~~~~~L~ 165 (225)
.+.++. ++.+ .....+++|+.+.+.+|... .+......... ..+. . ........++|++|.+.++.- .
T Consensus 91 ~~~~n~-~~~i---~~l~~l~~L~~l~l~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~-~ 164 (227)
T d1h6ua2 91 ELSGNP-LKNV---SAIAGLQSIKTLDLTSTQIT-DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQV-S 164 (227)
T ss_dssp ECCSCC-CSCC---GGGTTCTTCCEEECTTSCCC-CCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCC-C
T ss_pred cccccc-cccc---cccccccccccccccccccc-ccchhccccchhhhhchhhhhchhhhhcccccccccccccccc-c
Confidence 666552 3333 22345666666666665422 11111100000 0000 0 112234567788888876632 2
Q ss_pred eeecCCCccceeCCCccEEEEeCCCCCceecCCCCCCCCeeEEEecCCce
Q 046905 166 SFCSGVVDYTFKFPSLEDLIVTGCCNMKIFTSGDLITPKRVDAWYSESAC 215 (225)
Q Consensus 166 ~~~~~~~~~~~~~p~L~~L~I~~C~~L~~lp~~~~~~~~L~~l~i~~~~~ 215 (225)
.+.. ...+++|++|++++| +++.++. +..+++|++|+++++..
T Consensus 165 ~~~~-----l~~l~~L~~L~Ls~n-~l~~l~~-l~~l~~L~~L~Ls~N~l 207 (227)
T d1h6ua2 165 DLTP-----LANLSKLTTLKADDN-KISDISP-LASLPNLIEVHLKNNQI 207 (227)
T ss_dssp CCGG-----GTTCTTCCEEECCSS-CCCCCGG-GGGCTTCCEEECTTSCC
T ss_pred cchh-----hcccccceecccCCC-ccCCChh-hcCCCCCCEEECcCCcC
Confidence 2221 135899999999998 7888764 56789999999987754
No 12
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=98.81 E-value=3.1e-08 Score=79.18 Aligned_cols=61 Identities=7% Similarity=-0.171 Sum_probs=40.0
Q ss_pred cccccceeecCcCCCcceeecCCCccceeCCCccEEEEeCCCCCc-eecCCCCCCCCeeEEEecCCce
Q 046905 149 LFSKLRYMTMLDLENLTSFCSGVVDYTFKFPSLEDLIVTGCCNMK-IFTSGDLITPKRVDAWYSESAC 215 (225)
Q Consensus 149 ~~p~L~~L~l~~~~~L~~~~~~~~~~~~~~p~L~~L~I~~C~~L~-~lp~~~~~~~~L~~l~i~~~~~ 215 (225)
.+++|+.+.+.++.--..+.. ...+++|+.|+++++ +++ .+|..+..+++|++++++.+..
T Consensus 219 ~~~~l~~l~~~~~~l~~~~~~-----~~~~~~L~~L~Ls~N-~l~g~iP~~l~~L~~L~~L~Ls~N~l 280 (313)
T d1ogqa_ 219 SDKNTQKIHLAKNSLAFDLGK-----VGLSKNLNGLDLRNN-RIYGTLPQGLTQLKFLHSLNVSFNNL 280 (313)
T ss_dssp TTSCCSEEECCSSEECCBGGG-----CCCCTTCCEEECCSS-CCEECCCGGGGGCTTCCEEECCSSEE
T ss_pred ccccccccccccccccccccc-----cccccccccccCccC-eecccCChHHhCCCCCCEEECcCCcc
Confidence 445666666655532111111 134788999999887 455 7888788889999999887654
No 13
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.81 E-value=8.1e-09 Score=78.28 Aligned_cols=141 Identities=13% Similarity=0.129 Sum_probs=85.7
Q ss_pred HhccCCcEEEE-eccccceEeccCCcccccccccccccccccccccceEeccCccCccccCCchHHhhcccCCEEEEecC
Q 046905 44 EVLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCKKLMNLVPSSVAKSLERLVTLRVSGC 122 (225)
Q Consensus 44 ~~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C 122 (225)
..+.+|++|++ +| .++.+.. ...+++|+.|+++++ +++.+. ....+++|+.|++.+|
T Consensus 43 ~~L~~L~~L~l~~~-~i~~l~~-----------------l~~l~~L~~L~L~~n-~i~~l~---~~~~l~~L~~L~l~~n 100 (210)
T d1h6ta2 43 NELNSIDQIIANNS-DIKSVQG-----------------IQYLPNVTKLFLNGN-KLTDIK---PLANLKNLGWLFLDEN 100 (210)
T ss_dssp HHHHTCCEEECTTS-CCCCCTT-----------------GGGCTTCCEEECCSS-CCCCCG---GGTTCTTCCEEECCSS
T ss_pred HHhcCccEEECcCC-CCCCchh-----------------HhhCCCCCEEeCCCc-cccCcc---ccccCccccccccccc
Confidence 45789999999 54 4444321 234899999999999 566652 3468999999999998
Q ss_pred cccccccccccCCCC---Ccccc---cccccccccccceeecCcCCCcceeecCCCccceeCCCccEEEEeCCCCCceec
Q 046905 123 SAMTQVVASCDQGDS---DVAGA---NLEEEILFSKLRYMTMLDLENLTSFCSGVVDYTFKFPSLEDLIVTGCCNMKIFT 196 (225)
Q Consensus 123 ~~L~~l~~~~~~~~~---~~~~~---~~~~~~~~p~L~~L~l~~~~~L~~~~~~~~~~~~~~p~L~~L~I~~C~~L~~lp 196 (225)
. ++.++........ ..++. .......++.|+.+.+.++. ++... ....+++|+.+.+.++ +++.++
T Consensus 101 ~-i~~l~~l~~l~~L~~L~l~~~~~~~~~~l~~l~~l~~l~~~~n~-l~~~~-----~~~~l~~L~~l~l~~n-~l~~i~ 172 (210)
T d1h6ta2 101 K-VKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNK-ITDIT-----VLSRLTKLDTLSLEDN-QISDIV 172 (210)
T ss_dssp C-CCCGGGGTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSC-CCCCG-----GGGGCTTCSEEECCSS-CCCCCG
T ss_pred c-cccccccccccccccccccccccccccccccccccccccccccc-ccccc-----cccccccccccccccc-cccccc
Confidence 5 6665421111000 00000 00112233444444443331 22221 1245889999999998 567665
Q ss_pred CCCCCCCCeeEEEecCCce
Q 046905 197 SGDLITPKRVDAWYSESAC 215 (225)
Q Consensus 197 ~~~~~~~~L~~l~i~~~~~ 215 (225)
. +..+++|+.++++++..
T Consensus 173 ~-l~~l~~L~~L~Ls~N~i 190 (210)
T d1h6ta2 173 P-LAGLTKLQNLYLSKNHI 190 (210)
T ss_dssp G-GTTCTTCCEEECCSSCC
T ss_pred c-ccCCCCCCEEECCCCCC
Confidence 3 56789999999987644
No 14
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77 E-value=5.2e-08 Score=74.82 Aligned_cols=47 Identities=17% Similarity=0.202 Sum_probs=34.5
Q ss_pred ccccccccCccEEEEeeCCccccCCHhHHHhccCCcEEEE-eccccceE
Q 046905 15 DFPRHLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SCTSYKEI 62 (225)
Q Consensus 15 ~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c~~l~~~ 62 (225)
.+|.+.+++++.|+++++. +..+|...+.++++|++|++ ++.....+
T Consensus 22 ~iP~~l~~~l~~L~Ls~n~-i~~l~~~~f~~l~~L~~L~ls~n~~~~~i 69 (242)
T d1xwdc1 22 EIPSDLPRNAIELRFVLTK-LRVIQKGAFSGFGDLEKIEISQNDVLEVI 69 (242)
T ss_dssp SCCSCSCSCCSEEEEESCC-CCEECTTTTTTCTTCCEEEEESCTTCCEE
T ss_pred CcCCCCCCCCCEEECcCCc-CCccChhHhhccchhhhhhhcccccccee
Confidence 4566667799999999755 45666665678999999999 65544433
No 15
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.65 E-value=7.2e-08 Score=78.52 Aligned_cols=163 Identities=15% Similarity=0.182 Sum_probs=107.8
Q ss_pred ccccCccEEEEeeCCccccCCHhHHHhccCCcEEEE-eccccceEeccCCcccccccccccccccccccccceEeccCcc
Q 046905 19 HLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCK 97 (225)
Q Consensus 19 ~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~ 97 (225)
..+++++.+.++++.... ++. ....++|++|++ ++ .+++++ ....+++|+.|++.++.
T Consensus 194 ~~l~~~~~l~l~~n~i~~-~~~--~~~~~~L~~L~l~~n-~l~~~~-----------------~l~~l~~L~~L~l~~n~ 252 (384)
T d2omza2 194 AKLTNLESLIATNNQISD-ITP--LGILTNLDELSLNGN-QLKDIG-----------------TLASLTNLTDLDLANNQ 252 (384)
T ss_dssp GGCTTCSEEECCSSCCCC-CGG--GGGCTTCCEEECCSS-CCCCCG-----------------GGGGCTTCSEEECCSSC
T ss_pred ccccccceeeccCCccCC-CCc--ccccCCCCEEECCCC-CCCCcc-----------------hhhcccccchhccccCc
Confidence 457899999998755333 332 356899999999 55 444432 22348899999999984
Q ss_pred CccccCCchHHhhcccCCEEEEecCcccccccccccCCCC---Cccc---ccccccccccccceeecCcCCCcceeecCC
Q 046905 98 KLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDS---DVAG---ANLEEEILFSKLRYMTMLDLENLTSFCSGV 171 (225)
Q Consensus 98 ~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~---~~~~---~~~~~~~~~p~L~~L~l~~~~~L~~~~~~~ 171 (225)
++.+. ....+++|++|++.++. +..++........ .... ........+++++.|.+.++ +++.+..
T Consensus 253 -l~~~~---~~~~~~~L~~L~l~~~~-l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n-~l~~l~~-- 324 (384)
T d2omza2 253 -ISNLA---PLSGLTKLTELKLGANQ-ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFN-NISDISP-- 324 (384)
T ss_dssp -CCCCG---GGTTCTTCSEEECCSSC-CCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSS-CCSCCGG--
T ss_pred -cCCCC---cccccccCCEeeccCcc-cCCCCccccccccccccccccccccccccchhcccCeEECCCC-CCCCCcc--
Confidence 56552 35678999999998775 4444321111000 0000 01123456788888888776 4555432
Q ss_pred CccceeCCCccEEEEeCCCCCceecCCCCCCCCeeEEEecCCce
Q 046905 172 VDYTFKFPSLEDLIVTGCCNMKIFTSGDLITPKRVDAWYSESAC 215 (225)
Q Consensus 172 ~~~~~~~p~L~~L~I~~C~~L~~lp~~~~~~~~L~~l~i~~~~~ 215 (225)
...+|+|++|++++| +++.++ .+..+++|++++++.+..
T Consensus 325 ---l~~l~~L~~L~L~~n-~l~~l~-~l~~l~~L~~L~l~~N~l 363 (384)
T d2omza2 325 ---VSSLTKLQRLFFANN-KVSDVS-SLANLTNINWLSAGHNQI 363 (384)
T ss_dssp ---GGGCTTCCEEECCSS-CCCCCG-GGGGCTTCCEEECCSSCC
T ss_pred ---cccCCCCCEEECCCC-CCCCCh-hHcCCCCCCEEECCCCcC
Confidence 246899999999999 788776 367789999999987654
No 16
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.65 E-value=9.7e-08 Score=75.87 Aligned_cols=90 Identities=12% Similarity=0.070 Sum_probs=60.7
Q ss_pred cccccccceEeccCccCccccCCchHHhhcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCcC
Q 046905 82 KISFGNLTHLVVFSCKKLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLDL 161 (225)
Q Consensus 82 ~~~l~~L~~L~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~~ 161 (225)
...++.++.|.++++ .+..+. +.....+++|++|++++| +++.++ .....+++|++|.+++.
T Consensus 191 ~~~~~~l~~L~~s~n-~l~~~~-~~~~~~l~~L~~L~L~~N-~L~~lp---------------~~l~~l~~L~~L~Ls~N 252 (305)
T d1xkua_ 191 LKGLNNLAKLGLSFN-SISAVD-NGSLANTPHLRELHLNNN-KLVKVP---------------GGLADHKYIQVVYLHNN 252 (305)
T ss_dssp GTTCTTCCEEECCSS-CCCEEC-TTTGGGSTTCCEEECCSS-CCSSCC---------------TTTTTCSSCCEEECCSS
T ss_pred hhccccccccccccc-cccccc-cccccccccceeeecccc-cccccc---------------cccccccCCCEEECCCC
Confidence 334567777877777 455543 345567788888888887 466654 23456899999999996
Q ss_pred CCcceeecCCC---ccceeCCCccEEEEeCCC
Q 046905 162 ENLTSFCSGVV---DYTFKFPSLEDLIVTGCC 190 (225)
Q Consensus 162 ~~L~~~~~~~~---~~~~~~p~L~~L~I~~C~ 190 (225)
+++++....- ......++|+.|.+.+.|
T Consensus 253 -~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 253 -NISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp -CCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred -ccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 5877754320 011246789999999876
No 17
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.62 E-value=5e-08 Score=74.93 Aligned_cols=180 Identities=16% Similarity=0.137 Sum_probs=100.8
Q ss_pred cccccccccccccccccCccEEEEeeCCccccCCHhHHHhccCCcEEEE-eccccceEeccCCccccccccccccccccc
Q 046905 6 KDIQVIFQGDFPRHLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKIS 84 (225)
Q Consensus 6 ~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~ 84 (225)
++++.+-.+.|. .+++|++|+++++.....++...+..+++++++.+ +|.++..+... ....
T Consensus 39 n~i~~l~~~~f~--~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~---------------~~~~ 101 (242)
T d1xwdc1 39 TKLRVIQKGAFS--GFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPE---------------AFQN 101 (242)
T ss_dssp CCCCEECTTTTT--TCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTT---------------SEEC
T ss_pred CcCCccChhHhh--ccchhhhhhhccccccceeeccccccccccccccccccccccccccc---------------cccc
Confidence 334444443333 37899999999876655555544567899999999 88888766542 2234
Q ss_pred ccccceEeccCccCccccCCchHHhhcccCCEEEEecCc--ccccccccccCC---CC---Cccc--cc--ccccccccc
Q 046905 85 FGNLTHLVVFSCKKLMNLVPSSVAKSLERLVTLRVSGCS--AMTQVVASCDQG---DS---DVAG--AN--LEEEILFSK 152 (225)
Q Consensus 85 l~~L~~L~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C~--~L~~l~~~~~~~---~~---~~~~--~~--~~~~~~~p~ 152 (225)
+++|+.|++.++ +++.... ...+.+++.+.+..+. ++..+....... .. ..+. .. .......++
T Consensus 102 l~~L~~l~l~~~-~l~~~~~---~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~ 177 (242)
T d1xwdc1 102 LPNLQYLLISNT-GIKHLPD---VHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQ 177 (242)
T ss_dssp CTTCCEEEEESC-CCCSCCC---CTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCC
T ss_pred cccccccccchh-hhccccc---ccccccccccccccccccccccccccccccccccceeeecccccccccccccccchh
Confidence 788899988887 4544422 2234445555443332 333332211100 00 0000 00 011122345
Q ss_pred cceeecCcCCCcceeecCCCccceeCCCccEEEEeCCCCCceecCC-CCCCCCeeEEEe
Q 046905 153 LRYMTMLDLENLTSFCSGVVDYTFKFPSLEDLIVTGCCNMKIFTSG-DLITPKRVDAWY 210 (225)
Q Consensus 153 L~~L~l~~~~~L~~~~~~~~~~~~~~p~L~~L~I~~C~~L~~lp~~-~~~~~~L~~l~i 210 (225)
++++...+..+++.++.+. ...+++|++|++.+. +++.+|.. +..+++|+.+.+
T Consensus 178 l~~~~~l~~n~l~~l~~~~---f~~l~~L~~L~Ls~N-~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 178 LDELNLSDNNNLEELPNDV---FHGASGPVILDISRT-RIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp EEEEECTTCTTCCCCCTTT---TTTSCCCSEEECTTS-CCCCCCSSSCTTCCEEESSSE
T ss_pred hhccccccccccccccHHH---hcCCCCCCEEECCCC-cCCccCHHHHcCCcccccCcC
Confidence 5566556666777776532 345789999999886 47888764 345555554443
No 18
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.61 E-value=8.1e-08 Score=75.70 Aligned_cols=39 Identities=10% Similarity=0.065 Sum_probs=25.7
Q ss_pred ccccccccceeecCcCCCcceeecCCCccceeCCCccEEEEeC
Q 046905 146 EEILFSKLRYMTMLDLENLTSFCSGVVDYTFKFPSLEDLIVTG 188 (225)
Q Consensus 146 ~~~~~p~L~~L~l~~~~~L~~~~~~~~~~~~~~p~L~~L~I~~ 188 (225)
....+++|++|++.+.. +..+... ....+++|++|++.+
T Consensus 196 ~f~~l~~L~~L~l~~N~-i~~~~~~---~~~~~~~L~~L~l~~ 234 (284)
T d1ozna_ 196 AFRDLGRLMTLYLFANN-LSALPTE---ALAPLRALQYLRLND 234 (284)
T ss_dssp TTTTCTTCCEEECCSSC-CSCCCHH---HHTTCTTCCEEECCS
T ss_pred Hhhhhhhcccccccccc-ccccccc---ccccccccCEEEecC
Confidence 34567889999988754 3333321 123578999999976
No 19
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.48 E-value=2e-07 Score=72.74 Aligned_cols=155 Identities=17% Similarity=0.102 Sum_probs=81.9
Q ss_pred ccccccccccccccccccCccEEEEeeCCccccCCHhHHHhccCCcEEEE-eccccceEeccCCcccccccccccccccc
Q 046905 5 DKDIQVIFQGDFPRHLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKI 83 (225)
Q Consensus 5 ~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~ 83 (225)
+++++.+-.+.|. .+++|++|+++++. +..++. ...+++|++|++ ++ .+...+.. ..
T Consensus 40 ~N~i~~l~~~~f~--~l~~L~~L~L~~N~-l~~l~~--~~~l~~L~~L~Ls~N-~l~~~~~~----------------~~ 97 (266)
T d1p9ag_ 40 ENLLYTFSLATLM--PYTRLTQLNLDRAE-LTKLQV--DGTLPVLGTLDLSHN-QLQSLPLL----------------GQ 97 (266)
T ss_dssp TSCCSEEEGGGGT--TCTTCCEEECTTSC-CCEEEC--CSCCTTCCEEECCSS-CCSSCCCC----------------TT
T ss_pred CCcCCCcCHHHhh--cccccccccccccc-cccccc--ccccccccccccccc-cccccccc----------------cc
Confidence 3444444443333 37789999998764 344543 356899999999 54 44433221 12
Q ss_pred cccccceEeccCccCccccCCchHHhhcccCCEEEEecCcccccccccccCCC--C---C-----ccccccccccccccc
Q 046905 84 SFGNLTHLVVFSCKKLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGD--S---D-----VAGANLEEEILFSKL 153 (225)
Q Consensus 84 ~l~~L~~L~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~--~---~-----~~~~~~~~~~~~p~L 153 (225)
.+++|+.|+++++..-. +. ......++++++|.+.++. +..++......- . . ...........+++|
T Consensus 98 ~l~~L~~L~l~~~~~~~-~~-~~~~~~l~~l~~L~l~~n~-l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L 174 (266)
T d1p9ag_ 98 TLPALTVLDVSFNRLTS-LP-LGALRGLGELQELYLKGNE-LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENL 174 (266)
T ss_dssp TCTTCCEEECCSSCCCC-CC-SSTTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTC
T ss_pred cccccccccccccccce-ee-ccccccccccccccccccc-cceeccccccccccchhcccccccccccCcccccccccc
Confidence 24445555554443211 11 1222334444444444432 222221110000 0 0 000111234567899
Q ss_pred ceeecCcCCCcceeecCCCccceeCCCccEEEEeCC
Q 046905 154 RYMTMLDLENLTSFCSGVVDYTFKFPSLEDLIVTGC 189 (225)
Q Consensus 154 ~~L~l~~~~~L~~~~~~~~~~~~~~p~L~~L~I~~C 189 (225)
++|.+++.. |++++.+. +.+++|+.|.+.+-
T Consensus 175 ~~L~Ls~N~-L~~lp~~~----~~~~~L~~L~L~~N 205 (266)
T d1p9ag_ 175 DTLLLQENS-LYTIPKGF----FGSHLLPFAFLHGN 205 (266)
T ss_dssp CEEECCSSC-CCCCCTTT----TTTCCCSEEECCSC
T ss_pred ceeecccCC-CcccChhH----CCCCCCCEEEecCC
Confidence 999999874 88887654 56899999999863
No 20
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.43 E-value=3e-09 Score=80.11 Aligned_cols=125 Identities=18% Similarity=0.158 Sum_probs=64.4
Q ss_pred CccEEEEee-CCccccCCHhHHHhccCCcEEEEeccccceEeccCCcccccccccccccccccccccceEeccCccCccc
Q 046905 23 RLRRLEVVR-DDVATGFPVGLLEVLHSLETLHLSCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCKKLMN 101 (225)
Q Consensus 23 ~L~~L~l~~-~~~~~~~p~~~~~~l~~L~~L~l~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~~L~~ 101 (225)
.++.+.+.+ ...+..++.. +..+++|++|+++...++++.. ...+++|+.|+++++ .++.
T Consensus 24 ~~~~~~l~~~~~~i~~l~~s-l~~L~~L~~L~Ls~n~I~~i~~-----------------l~~l~~L~~L~Ls~N-~i~~ 84 (198)
T d1m9la_ 24 EAEKVELHGMIPPIEKMDAT-LSTLKACKHLALSTNNIEKISS-----------------LSGMENLRILSLGRN-LIKK 84 (198)
T ss_dssp TCSCEECCBCCTTCCCCHHH-HHHTTTCCEEECSEEEESCCCC-----------------HHHHTTCCEEECCEE-EECS
T ss_pred ccceeeeecccCchhhhhhH-HhcccccceeECcccCCCCccc-----------------ccCCccccChhhccc-cccc
Confidence 344555554 2233334333 4667777777772223443321 123667777777766 3554
Q ss_pred cCCchHHhhcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCcC--CCcceeecCCCccceeCC
Q 046905 102 LVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLDL--ENLTSFCSGVVDYTFKFP 179 (225)
Q Consensus 102 l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~~--~~L~~~~~~~~~~~~~~p 179 (225)
+ +.....+++|+.|++.++. +..+. ....+++|+.|.+.++ ..+..+. ....+|
T Consensus 85 i--~~~~~~~~~L~~L~l~~N~-i~~l~----------------~~~~l~~L~~L~L~~N~i~~~~~~~-----~l~~l~ 140 (198)
T d1m9la_ 85 I--ENLDAVADTLEELWISYNQ-IASLS----------------GIEKLVNLRVLYMSNNKITNWGEID-----KLAALD 140 (198)
T ss_dssp C--SSHHHHHHHCCEEECSEEE-CCCHH----------------HHHHHHHSSEEEESEEECCCHHHHH-----HHTTTT
T ss_pred c--ccccccccccccccccccc-ccccc----------------cccccccccccccccchhccccccc-----cccCCC
Confidence 4 2233445667777776653 44431 2335566777776654 2222111 112367
Q ss_pred CccEEEEeCCC
Q 046905 180 SLEDLIVTGCC 190 (225)
Q Consensus 180 ~L~~L~I~~C~ 190 (225)
+|++|.+.++|
T Consensus 141 ~L~~L~L~~N~ 151 (198)
T d1m9la_ 141 KLEDLLLAGNP 151 (198)
T ss_dssp TCSEEEECSSH
T ss_pred ccceeecCCCc
Confidence 77777777764
No 21
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.43 E-value=2.5e-07 Score=67.05 Aligned_cols=105 Identities=12% Similarity=0.011 Sum_probs=63.2
Q ss_pred ccccccceEeccCccCccccCCchHHhhcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCcCC
Q 046905 83 ISFGNLTHLVVFSCKKLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLDLE 162 (225)
Q Consensus 83 ~~l~~L~~L~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~~~ 162 (225)
..+++|+.|+++++ .++.+. ....+++|++|++++|. +..++. .....+|+|++|.+.++.
T Consensus 38 ~~l~~L~~L~Ls~N-~i~~l~---~~~~l~~L~~L~ls~N~-i~~l~~--------------~~~~~l~~L~~L~L~~N~ 98 (162)
T d1a9na_ 38 ATLDQFDAIDFSDN-EIRKLD---GFPLLRRLKTLLVNNNR-ICRIGE--------------GLDQALPDLTELILTNNS 98 (162)
T ss_dssp GGTTCCSEEECCSS-CCCEEC---CCCCCSSCCEEECCSSC-CCEECS--------------CHHHHCTTCCEEECCSCC
T ss_pred cccccCCEEECCCC-CCCccC---CcccCcchhhhhccccc-ccCCCc--------------cccccccccccceecccc
Confidence 34677888888877 466552 24567788888888875 555431 112357788888887763
Q ss_pred CcceeecCCCccceeCCCccEEEEeCCCCCceecC----CCCCCCCeeEEEe
Q 046905 163 NLTSFCSGVVDYTFKFPSLEDLIVTGCCNMKIFTS----GDLITPKRVDAWY 210 (225)
Q Consensus 163 ~L~~~~~~~~~~~~~~p~L~~L~I~~C~~L~~lp~----~~~~~~~L~~l~i 210 (225)
++.+..-. ....+|+|++|++.+|+ +..+|. ....+|+|+.|+.
T Consensus 99 -i~~~~~l~--~l~~l~~L~~L~l~~N~-i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 99 -LVELGDLD--PLASLKSLTYLCILRNP-VTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp -CCCGGGGG--GGGGCTTCCEEECCSSG-GGGSTTHHHHHHHHCTTCSEETT
T ss_pred -cccccccc--ccccccccchhhcCCCc-cccccchHHHHHHHCCCcCeeCC
Confidence 22222100 12357888888888874 344442 1345677777654
No 22
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.41 E-value=3.9e-07 Score=62.99 Aligned_cols=76 Identities=24% Similarity=0.206 Sum_probs=38.2
Q ss_pred cEEEEeeCCccccCCHhHHHhccCCcEEEEeccccceEeccCCcccccccccccccccccccccceEeccCccCccccCC
Q 046905 25 RRLEVVRDDVATGFPVGLLEVLHSLETLHLSCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCKKLMNLVP 104 (225)
Q Consensus 25 ~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~~L~~l~~ 104 (225)
|.|+++++.. ..++. ++.+++|++|+++...+.+++. ....+++|+.|++++. .++.+
T Consensus 1 R~L~Ls~n~l-~~l~~--l~~l~~L~~L~ls~N~l~~lp~----------------~~~~l~~L~~L~l~~N-~i~~l-- 58 (124)
T d1dcea3 1 RVLHLAHKDL-TVLCH--LEQLLLVTHLDLSHNRLRALPP----------------ALAALRCLEVLQASDN-ALENV-- 58 (124)
T ss_dssp SEEECTTSCC-SSCCC--GGGGTTCCEEECCSSCCCCCCG----------------GGGGCTTCCEEECCSS-CCCCC--
T ss_pred CEEEcCCCCC-CCCcc--cccCCCCCEEECCCCccCcchh----------------hhhhhhcccccccccc-ccccc--
Confidence 3455554332 33332 4556666666664444544432 1223566666666664 44443
Q ss_pred chHHhhcccCCEEEEecCc
Q 046905 105 SSVAKSLERLVTLRVSGCS 123 (225)
Q Consensus 105 ~~~~~~l~~L~~L~I~~C~ 123 (225)
.....+++|++|++.++.
T Consensus 59 -~~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 59 -DGVANLPRLQELLLCNNR 76 (124)
T ss_dssp -GGGTTCSSCCEEECCSSC
T ss_pred -CccccccccCeEECCCCc
Confidence 124556666666666553
No 23
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.40 E-value=2.5e-07 Score=68.77 Aligned_cols=116 Identities=16% Similarity=0.133 Sum_probs=81.1
Q ss_pred ccccccccCccEEEEeeCCccccCCHhHHHhccCCcEEEEeccccceEeccCCcccccccccccccccccccccceEecc
Q 046905 15 DFPRHLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHLSCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVF 94 (225)
Q Consensus 15 ~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~ 94 (225)
.+|.+..+++++|+++++......+...+..+++|++|+++-..+..++. .....+++|++|+++
T Consensus 22 ~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~---------------~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 22 EIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEP---------------NAFEGASHIQELQLG 86 (192)
T ss_dssp SCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCT---------------TTTTTCTTCCEEECC
T ss_pred ccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccc---------------cccccccccceeeec
Confidence 34666667999999998765444555556789999999994344544433 123347889999999
Q ss_pred CccCccccCCchHHhhcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCcCC
Q 046905 95 SCKKLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLDLE 162 (225)
Q Consensus 95 ~C~~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~~~ 162 (225)
+. +++.+. +.....+++|++|++.+.. +..++.. ....+++|++|.+.+-+
T Consensus 87 ~N-~l~~l~-~~~F~~l~~L~~L~L~~N~-l~~i~~~--------------~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 87 EN-KIKEIS-NKMFLGLHQLKTLNLYDNQ-ISCVMPG--------------SFEHLNSLTSLNLASNP 137 (192)
T ss_dssp SC-CCCEEC-SSSSTTCTTCCEEECCSSC-CCEECTT--------------SSTTCTTCCEEECTTCC
T ss_pred cc-cccccC-HHHHhCCCcccccccCCcc-ccccCHH--------------HhcCCcccccccccccc
Confidence 88 677764 3456789999999999875 7766532 22356788888887654
No 24
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.38 E-value=6.9e-07 Score=64.62 Aligned_cols=129 Identities=16% Similarity=0.157 Sum_probs=85.8
Q ss_pred ccCccEEEEeeCCccccCCHhHHHhccCCcEEEEeccccceEeccCCcccccccccccccccccccccceEeccCccCcc
Q 046905 21 FGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHLSCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCKKLM 100 (225)
Q Consensus 21 l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~~L~ 100 (225)
..++|+|+++++.. ..++. ....+++|++|+++-..+.++.. ...+++|+.|++++|. ++
T Consensus 17 ~~~lr~L~L~~n~I-~~i~~-~~~~l~~L~~L~Ls~N~i~~l~~-----------------~~~l~~L~~L~ls~N~-i~ 76 (162)
T d1a9na_ 17 AVRDRELDLRGYKI-PVIEN-LGATLDQFDAIDFSDNEIRKLDG-----------------FPLLRRLKTLLVNNNR-IC 76 (162)
T ss_dssp TTSCEEEECTTSCC-CSCCC-GGGGTTCCSEEECCSSCCCEECC-----------------CCCCSSCCEEECCSSC-CC
T ss_pred cCcCcEEECCCCCC-CccCc-cccccccCCEEECCCCCCCccCC-----------------cccCcchhhhhccccc-cc
Confidence 45799999998653 44553 24678999999994446776632 2348899999999994 77
Q ss_pred ccCCchHHhhcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCcCCCcceeecCCCccceeCCC
Q 046905 101 NLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLDLENLTSFCSGVVDYTFKFPS 180 (225)
Q Consensus 101 ~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~~~~L~~~~~~~~~~~~~~p~ 180 (225)
.+. +.....+++|++|++.++. +..+... .....+|+|++|.+.++|- .............+|+
T Consensus 77 ~l~-~~~~~~l~~L~~L~L~~N~-i~~~~~l-------------~~l~~l~~L~~L~l~~N~i-~~~~~~r~~~i~~lp~ 140 (162)
T d1a9na_ 77 RIG-EGLDQALPDLTELILTNNS-LVELGDL-------------DPLASLKSLTYLCILRNPV-TNKKHYRLYVIYKVPQ 140 (162)
T ss_dssp EEC-SCHHHHCTTCCEEECCSCC-CCCGGGG-------------GGGGGCTTCCEEECCSSGG-GGSTTHHHHHHHHCTT
T ss_pred CCC-ccccccccccccceecccc-ccccccc-------------cccccccccchhhcCCCcc-ccccchHHHHHHHCCC
Confidence 663 3455689999999999985 4444211 2345689999999998852 2221100001234788
Q ss_pred ccEEE
Q 046905 181 LEDLI 185 (225)
Q Consensus 181 L~~L~ 185 (225)
|+.|+
T Consensus 141 L~~LD 145 (162)
T d1a9na_ 141 VRVLD 145 (162)
T ss_dssp CSEET
T ss_pred cCeeC
Confidence 87765
No 25
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.26 E-value=2.6e-06 Score=63.03 Aligned_cols=109 Identities=11% Similarity=0.060 Sum_probs=77.1
Q ss_pred ccccceEeccCccCccccCCchHHhhcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCcCCCc
Q 046905 85 FGNLTHLVVFSCKKLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLDLENL 164 (225)
Q Consensus 85 l~~L~~L~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~~~~L 164 (225)
++++++|++++. .+...........+++|++|++.+.. +..++. .....+++|++|.+.+. ++
T Consensus 28 p~~l~~L~Ls~N-~i~~~~~~~~f~~l~~L~~L~L~~N~-i~~~~~--------------~~~~~~~~L~~L~Ls~N-~l 90 (192)
T d1w8aa_ 28 PLHTTELLLNDN-ELGRISSDGLFGRLPHLVKLELKRNQ-LTGIEP--------------NAFEGASHIQELQLGEN-KI 90 (192)
T ss_dssp CTTCSEEECCSC-CCCSBCCSCSGGGCTTCCEEECCSSC-CCCBCT--------------TTTTTCTTCCEEECCSC-CC
T ss_pred CCCCCEEEeCCC-CCcccccccccCCCceEeeeeccccc-cccccc--------------cccccccccceeeeccc-cc
Confidence 467889999887 45443334455778999999998775 444432 23345788889888877 67
Q ss_pred ceeecCCCccceeCCCccEEEEeCCCCCceecCC-CCCCCCeeEEEecCCc
Q 046905 165 TSFCSGVVDYTFKFPSLEDLIVTGCCNMKIFTSG-DLITPKRVDAWYSESA 214 (225)
Q Consensus 165 ~~~~~~~~~~~~~~p~L~~L~I~~C~~L~~lp~~-~~~~~~L~~l~i~~~~ 214 (225)
+.+..+. +..+++|++|++.+. +++.+|.+ +..+++|+++++.++.
T Consensus 91 ~~l~~~~---F~~l~~L~~L~L~~N-~l~~i~~~~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 91 KEISNKM---FLGLHQLKTLNLYDN-QISCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp CEECSSS---STTCTTCCEEECCSS-CCCEECTTSSTTCTTCCEEECTTCC
T ss_pred cccCHHH---HhCCCcccccccCCc-cccccCHHHhcCCcccccccccccc
Confidence 7776543 345889999999886 78888765 4678899999987553
No 26
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=98.22 E-value=2.9e-06 Score=67.34 Aligned_cols=83 Identities=18% Similarity=0.201 Sum_probs=49.4
Q ss_pred CccEEEEeeCCccc--cCCHhHHHhccCCcEEEE-eccccc-eEeccCCcccccccccccccccccccccceEeccCccC
Q 046905 23 RLRRLEVVRDDVAT--GFPVGLLEVLHSLETLHL-SCTSYK-EIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCKK 98 (225)
Q Consensus 23 ~L~~L~l~~~~~~~--~~p~~~~~~l~~L~~L~l-~c~~l~-~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~~ 98 (225)
+++.|++.++.... .+|.. ++++++|++|++ +|.++. .+|. ....+++|++|+++++.
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~-l~~L~~L~~L~Ls~~N~l~g~iP~----------------~i~~L~~L~~L~Ls~N~- 112 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSS-LANLPYLNFLYIGGINNLVGPIPP----------------AIAKLTQLHYLYITHTN- 112 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGG-GGGCTTCSEEEEEEETTEESCCCG----------------GGGGCTTCSEEEEEEEC-
T ss_pred EEEEEECCCCCCCCCCCCChH-HhcCcccccccccccccccccccc----------------ccccccccchhhhcccc-
Confidence 57888888744332 35554 578888888888 777665 3322 23346667777776663
Q ss_pred ccccCCchHHhhcccCCEEEEecCcc
Q 046905 99 LMNLVPSSVAKSLERLVTLRVSGCSA 124 (225)
Q Consensus 99 L~~l~~~~~~~~l~~L~~L~I~~C~~ 124 (225)
+.... +.....+++|+.+++..+..
T Consensus 113 l~~~~-~~~~~~~~~L~~l~l~~N~~ 137 (313)
T d1ogqa_ 113 VSGAI-PDFLSQIKTLVTLDFSYNAL 137 (313)
T ss_dssp CEEEC-CGGGGGCTTCCEEECCSSEE
T ss_pred ccccc-cccccchhhhcccccccccc
Confidence 33332 23345566666666666543
No 27
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.14 E-value=2.8e-06 Score=58.52 Aligned_cols=96 Identities=22% Similarity=0.279 Sum_probs=68.1
Q ss_pred CccccccccccccccccccCccEEEEeeCCccccCCHhHHHhccCCcEEEEeccccceEeccCCcccccccccccccccc
Q 046905 4 LDKDIQVIFQGDFPRHLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHLSCTSYKEIFSNEGCLESHVGVSKLALIKI 83 (225)
Q Consensus 4 ~~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l~c~~l~~~~~~~~~~~~~l~~~~l~~~~~ 83 (225)
-++++..+- +-+.+++|++|+++++. ++.+|.. +..+++|++|+++-..+++++. ..
T Consensus 6 s~n~l~~l~----~l~~l~~L~~L~ls~N~-l~~lp~~-~~~l~~L~~L~l~~N~i~~l~~-----------------~~ 62 (124)
T d1dcea3 6 AHKDLTVLC----HLEQLLLVTHLDLSHNR-LRALPPA-LAALRCLEVLQASDNALENVDG-----------------VA 62 (124)
T ss_dssp TTSCCSSCC----CGGGGTTCCEEECCSSC-CCCCCGG-GGGCTTCCEEECCSSCCCCCGG-----------------GT
T ss_pred CCCCCCCCc----ccccCCCCCEEECCCCc-cCcchhh-hhhhhcccccccccccccccCc-----------------cc
Confidence 345555442 12568899999999755 4667765 5789999999994456665532 23
Q ss_pred cccccceEeccCccCccccCCchHHhhcccCCEEEEecCc
Q 046905 84 SFGNLTHLVVFSCKKLMNLVPSSVAKSLERLVTLRVSGCS 123 (225)
Q Consensus 84 ~l~~L~~L~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C~ 123 (225)
.+++|+.|++.++ .+..+........+++|+.|++.+-+
T Consensus 63 ~l~~L~~L~l~~N-~i~~~~~~~~l~~~~~L~~L~l~~N~ 101 (124)
T d1dcea3 63 NLPRLQELLLCNN-RLQQSAAIQPLVSCPRLVLLNLQGNS 101 (124)
T ss_dssp TCSSCCEEECCSS-CCCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred cccccCeEECCCC-ccCCCCCchhhcCCCCCCEEECCCCc
Confidence 4899999999988 56555333456788999999998754
No 28
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.96 E-value=1.7e-05 Score=56.58 Aligned_cols=86 Identities=13% Similarity=0.089 Sum_probs=48.0
Q ss_pred hhcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCcCCCcceeecCCCccceeCCCccEEEEeC
Q 046905 109 KSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLDLENLTSFCSGVVDYTFKFPSLEDLIVTG 188 (225)
Q Consensus 109 ~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~~~~L~~~~~~~~~~~~~~p~L~~L~I~~ 188 (225)
..+++|++|+|.+...++.+... ....+++|+.|.+.+. +|+.+..+. ...+++|++|++++
T Consensus 28 ~~l~~l~~L~l~~n~~l~~i~~~--------------~f~~l~~L~~L~Ls~N-~l~~i~~~~---f~~l~~L~~L~Ls~ 89 (156)
T d2ifga3 28 PGAENLTELYIENQQHLQHLELR--------------DLRGLGELRNLTIVKS-GLRFVAPDA---FHFTPRLSRLNLSF 89 (156)
T ss_dssp CSCSCCSEEECCSCSSCCEECGG--------------GSCSCCCCSEEECCSS-CCCEECTTG---GGSCSCCCEEECCS
T ss_pred cCccccCeeecCCCccccccCch--------------hhccccccCcceeecc-ccCCccccc---ccccccccceeccC
Confidence 34556666666655555554321 2234566666666555 355554432 23466777777766
Q ss_pred CCCCceecCCCCCCCCeeEEEecCC
Q 046905 189 CCNMKIFTSGDLITPKRVDAWYSES 213 (225)
Q Consensus 189 C~~L~~lp~~~~~~~~L~~l~i~~~ 213 (225)
. +++.+|.+.....+|+.|+++++
T Consensus 90 N-~l~~l~~~~~~~~~l~~L~L~~N 113 (156)
T d2ifga3 90 N-ALESLSWKTVQGLSLQELVLSGN 113 (156)
T ss_dssp S-CCSCCCSTTTCSCCCCEEECCSS
T ss_pred C-CCcccChhhhccccccccccCCC
Confidence 4 56666665544456777777643
No 29
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=97.94 E-value=6.6e-07 Score=66.89 Aligned_cols=106 Identities=17% Similarity=0.166 Sum_probs=73.7
Q ss_pred ccccCccEEEEeeCCccccCCHhHHHhccCCcEEEE-eccccceEeccCCcccccccccccccccccccccceEeccCcc
Q 046905 19 HLFGRLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCK 97 (225)
Q Consensus 19 ~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~ 97 (225)
..+++|+.|+++++.. ..++. +..+++|++|++ ++ .+.+++. ....+++|+.|++.++
T Consensus 45 ~~L~~L~~L~Ls~n~I-~~i~~--l~~l~~L~~L~Ls~N-~i~~i~~----------------~~~~~~~L~~L~l~~N- 103 (198)
T d1m9la_ 45 STLKACKHLALSTNNI-EKISS--LSGMENLRILSLGRN-LIKKIEN----------------LDAVADTLEELWISYN- 103 (198)
T ss_dssp HHTTTCCEEECSEEEE-SCCCC--HHHHTTCCEEECCEE-EECSCSS----------------HHHHHHHCCEEECSEE-
T ss_pred hcccccceeECcccCC-CCccc--ccCCccccChhhccc-ccccccc----------------cccccccccccccccc-
Confidence 3588999999998653 44553 678999999999 55 3444422 1123578999999887
Q ss_pred CccccCCchHHhhcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCcCC
Q 046905 98 KLMNLVPSSVAKSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLDLE 162 (225)
Q Consensus 98 ~L~~l~~~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~~~ 162 (225)
.++.+ .....+++|+.|+++++. +..+... .....+|+|+.|.+.+.|
T Consensus 104 ~i~~l---~~~~~l~~L~~L~L~~N~-i~~~~~~-------------~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 104 QIASL---SGIEKLVNLRVLYMSNNK-ITNWGEI-------------DKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp ECCCH---HHHHHHHHSSEEEESEEE-CCCHHHH-------------HHHTTTTTCSEEEECSSH
T ss_pred ccccc---ccccccccccccccccch-hcccccc-------------ccccCCCccceeecCCCc
Confidence 56655 346788999999998874 4433210 133467899999998875
No 30
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=97.83 E-value=5.2e-05 Score=60.03 Aligned_cols=76 Identities=25% Similarity=0.237 Sum_probs=46.8
Q ss_pred cCccEEEEeeCCccccCCHhHHHhccCCcEEEEeccccceEeccCCcccccccccccccccccccccceEeccCccCccc
Q 046905 22 GRLRRLEVVRDDVATGFPVGLLEVLHSLETLHLSCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCKKLMN 101 (225)
Q Consensus 22 ~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~~L~~ 101 (225)
.++++|+++++. ++.+|. .+++|++|+++|..+++++.. +++|+.|++.++ +++.
T Consensus 38 ~~l~~LdLs~~~-L~~lp~----~~~~L~~L~Ls~N~l~~lp~~-------------------~~~L~~L~l~~n-~l~~ 92 (353)
T d1jl5a_ 38 RQAHELELNNLG-LSSLPE----LPPHLESLVASCNSLTELPEL-------------------PQSLKSLLVDNN-NLKA 92 (353)
T ss_dssp HTCSEEECTTSC-CSCCCS----CCTTCSEEECCSSCCSSCCCC-------------------CTTCCEEECCSS-CCSC
T ss_pred cCCCEEEeCCCC-CCCCCC----CCCCCCEEECCCCCCcccccc-------------------hhhhhhhhhhhc-ccch
Confidence 368899998754 456774 268899999877788877542 446666666655 2333
Q ss_pred cCCchHHhhcccCCEEEEecCcccccc
Q 046905 102 LVPSSVAKSLERLVTLRVSGCSAMTQV 128 (225)
Q Consensus 102 l~~~~~~~~l~~L~~L~I~~C~~L~~l 128 (225)
+. . -.+.|++|++.++. +..+
T Consensus 93 l~--~---lp~~L~~L~L~~n~-l~~l 113 (353)
T d1jl5a_ 93 LS--D---LPPLLEYLGVSNNQ-LEKL 113 (353)
T ss_dssp CC--S---CCTTCCEEECCSSC-CSSC
T ss_pred hh--h---hccccccccccccc-cccc
Confidence 31 0 11346666666553 4444
No 31
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=97.60 E-value=0.00023 Score=56.14 Aligned_cols=71 Identities=17% Similarity=0.054 Sum_probs=53.5
Q ss_pred hcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCcCCCcceeecCCCccceeCCCccEEEEeCC
Q 046905 110 SLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLDLENLTSFCSGVVDYTFKFPSLEDLIVTGC 189 (225)
Q Consensus 110 ~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~~~~L~~~~~~~~~~~~~~p~L~~L~I~~C 189 (225)
.+++|++|++++|. +++++ ..+++|+.|.+.++ ++++++. .+++|++|++++|
T Consensus 282 ~~~~L~~L~Ls~N~-l~~lp------------------~~~~~L~~L~L~~N-~L~~l~~-------~~~~L~~L~L~~N 334 (353)
T d1jl5a_ 282 LPPSLEELNVSNNK-LIELP------------------ALPPRLERLIASFN-HLAEVPE-------LPQNLKQLHVEYN 334 (353)
T ss_dssp CCTTCCEEECCSSC-CSCCC------------------CCCTTCCEEECCSS-CCSCCCC-------CCTTCCEEECCSS
T ss_pred cCCCCCEEECCCCc-cCccc------------------cccCCCCEEECCCC-cCCcccc-------ccCCCCEEECcCC
Confidence 46889999999984 66654 13689999999876 5766653 2578999999999
Q ss_pred CCCceecCCCCCCCCeeEEEec
Q 046905 190 CNMKIFTSGDLITPKRVDAWYS 211 (225)
Q Consensus 190 ~~L~~lp~~~~~~~~L~~l~i~ 211 (225)
+ ++++|.. +.+|+.|+++
T Consensus 335 ~-L~~lp~~---~~~L~~L~~~ 352 (353)
T d1jl5a_ 335 P-LREFPDI---PESVEDLRMN 352 (353)
T ss_dssp C-CSSCCCC---CTTCCEEECC
T ss_pred c-CCCCCcc---ccccCeeECc
Confidence 6 9999852 4567888764
No 32
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.60 E-value=7.9e-05 Score=52.99 Aligned_cols=68 Identities=15% Similarity=0.121 Sum_probs=41.9
Q ss_pred HhccCCcEEEE-eccccceEeccCCcccccccccccccccccccccceEeccCccCccccCCchHHhhcccCCEEEEecC
Q 046905 44 EVLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCKKLMNLVPSSVAKSLERLVTLRVSGC 122 (225)
Q Consensus 44 ~~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C 122 (225)
..+++|++|++ +...++.+... .+..+++|+.|+++++ +++.+. +.....+++|++|++++.
T Consensus 28 ~~l~~l~~L~l~~n~~l~~i~~~---------------~f~~l~~L~~L~Ls~N-~l~~i~-~~~f~~l~~L~~L~Ls~N 90 (156)
T d2ifga3 28 PGAENLTELYIENQQHLQHLELR---------------DLRGLGELRNLTIVKS-GLRFVA-PDAFHFTPRLSRLNLSFN 90 (156)
T ss_dssp CSCSCCSEEECCSCSSCCEECGG---------------GSCSCCCCSEEECCSS-CCCEEC-TTGGGSCSCCCEEECCSS
T ss_pred cCccccCeeecCCCccccccCch---------------hhccccccCcceeecc-ccCCcc-cccccccccccceeccCC
Confidence 34667777777 55566666431 2234677777777777 466653 344566777777777766
Q ss_pred ccccccc
Q 046905 123 SAMTQVV 129 (225)
Q Consensus 123 ~~L~~l~ 129 (225)
. ++.++
T Consensus 91 ~-l~~l~ 96 (156)
T d2ifga3 91 A-LESLS 96 (156)
T ss_dssp C-CSCCC
T ss_pred C-CcccC
Confidence 5 55544
No 33
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.34 E-value=0.00063 Score=55.32 Aligned_cols=117 Identities=16% Similarity=0.191 Sum_probs=62.7
Q ss_pred cCCcEEEEeccccceEeccCCcccccccccccccccccccccceEeccCccCccccCC---chHHhhcccCCEEEEecCc
Q 046905 47 HSLETLHLSCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCKKLMNLVP---SSVAKSLERLVTLRVSGCS 123 (225)
Q Consensus 47 ~~L~~L~l~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~~L~~l~~---~~~~~~l~~L~~L~I~~C~ 123 (225)
++|++|+|+|.++....- ......+++++.|++.+|. ++.... ...+..+++|++|+++++.
T Consensus 2 ~~l~~ld~~~~~i~~~~~--------------~~l~~~l~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs~N~ 66 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARW--------------AELLPLLQQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLRSNE 66 (460)
T ss_dssp EEEEEEEEESCCCCHHHH--------------HHHHHHHTTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECTTCC
T ss_pred CCCCEEEeeCCcCChHHH--------------HHHHHhCCCCCEEEeCCCC-CCHHHHHHHHHHHhcCCCCCEEECcCCc
Confidence 467888888877654311 1223346788888888883 543211 1234567888888888764
Q ss_pred ccccccccccCCCCCccccccccc-ccccccceeecCcCCCcceeecCC-CccceeCCCccEEEEeCCC
Q 046905 124 AMTQVVASCDQGDSDVAGANLEEE-ILFSKLRYMTMLDLENLTSFCSGV-VDYTFKFPSLEDLIVTGCC 190 (225)
Q Consensus 124 ~L~~l~~~~~~~~~~~~~~~~~~~-~~~p~L~~L~l~~~~~L~~~~~~~-~~~~~~~p~L~~L~I~~C~ 190 (225)
+.......-. ... ...++|++|.+.+|. ++...... ......+++|++|++.++.
T Consensus 67 -i~~~~~~~l~----------~~l~~~~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 67 -LGDVGVHCVL----------QGLQTPSCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp -CHHHHHHHHH----------HTTCSTTCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred -CChHHHHHHH----------HHHhcCCCCCCEEECCCCC-ccccccccccchhhcccccccccccccc
Confidence 3211000000 000 122468888888873 43321100 0011246788888888764
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.08 E-value=0.00076 Score=54.81 Aligned_cols=34 Identities=18% Similarity=0.424 Sum_probs=15.5
Q ss_pred CccEEEEeeCCccccCCHhHHHhccCCcEEEE-ec
Q 046905 23 RLRRLEVVRDDVATGFPVGLLEVLHSLETLHL-SC 56 (225)
Q Consensus 23 ~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l-~c 56 (225)
+|+.|+|++......--...+..++++++|++ +|
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~ 37 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDC 37 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESS
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCC
Confidence 45666665422211111122345666666666 55
No 35
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.23 E-value=0.018 Score=40.37 Aligned_cols=64 Identities=20% Similarity=0.136 Sum_probs=38.0
Q ss_pred cccccceEeccCccCccccCC-chHHhhcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCcCC
Q 046905 84 SFGNLTHLVVFSCKKLMNLVP-SSVAKSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLDLE 162 (225)
Q Consensus 84 ~l~~L~~L~i~~C~~L~~l~~-~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~~~ 162 (225)
.+++|+.|+++++ +++.+.. ......+++|+.|++++.. ++.+.. ......++|+.|.+.+.|
T Consensus 63 ~~~~L~~L~Ls~N-~i~~l~~~~~~~~~l~~L~~L~Ls~N~-i~~l~~--------------l~~l~~~~L~~L~L~~Np 126 (162)
T d1koha1 63 NIPELLSLNLSNN-RLYRLDDMSSIVQKAPNLKILNLSGNE-LKSERE--------------LDKIKGLKLEELWLDGNS 126 (162)
T ss_dssp HCTTCCCCCCCSS-CCCCCSGGGTHHHHSTTCCCCCCTTSC-CCCGGG--------------HHHHTTCCCSSCCCTTST
T ss_pred hCCCCCEeeCCCc-cccCCchhHHHHhhCCcccccccccCc-cccchh--------------hhhhhccccceeecCCCC
Confidence 4678888888877 4555421 2345677888888887754 444321 111234467777776655
Q ss_pred C
Q 046905 163 N 163 (225)
Q Consensus 163 ~ 163 (225)
-
T Consensus 127 l 127 (162)
T d1koha1 127 L 127 (162)
T ss_dssp T
T ss_pred c
Confidence 3
No 36
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.49 E-value=0.012 Score=41.23 Aligned_cols=94 Identities=18% Similarity=0.020 Sum_probs=55.1
Q ss_pred HHhccCCcEEEEeccccceEeccCCcccccccccccccccccccccceEeccCccCccccCCchHHhhcccCCEEEEecC
Q 046905 43 LEVLHSLETLHLSCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSCKKLMNLVPSSVAKSLERLVTLRVSGC 122 (225)
Q Consensus 43 ~~~l~~L~~L~l~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C~~L~~l~~~~~~~~l~~L~~L~I~~C 122 (225)
...+++|++|+++...+..+.... .....+++|+.|++++. .++++... ......+|+.|++.+.
T Consensus 61 ~~~~~~L~~L~Ls~N~i~~l~~~~-------------~~~~~l~~L~~L~Ls~N-~i~~l~~l-~~l~~~~L~~L~L~~N 125 (162)
T d1koha1 61 EENIPELLSLNLSNNRLYRLDDMS-------------SIVQKAPNLKILNLSGN-ELKSEREL-DKIKGLKLEELWLDGN 125 (162)
T ss_dssp HHHCTTCCCCCCCSSCCCCCSGGG-------------THHHHSTTCCCCCCTTS-CCCCGGGH-HHHTTCCCSSCCCTTS
T ss_pred HHhCCCCCEeeCCCccccCCchhH-------------HHHhhCCcccccccccC-ccccchhh-hhhhccccceeecCCC
Confidence 357899999999555566553211 12335789999999987 56665321 2234567889888876
Q ss_pred cccccccccccCCCCCcccccccccccccccceeecC
Q 046905 123 SAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTML 159 (225)
Q Consensus 123 ~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~ 159 (225)
+ +........ +........||+|+.|+=.
T Consensus 126 p-l~~~~~~~~-------~y~~~i~~~~P~L~~LDg~ 154 (162)
T d1koha1 126 S-LSDTFRDQS-------TYISAIRERFPKLLRLDGH 154 (162)
T ss_dssp T-TSSSSSSHH-------HHHHHHHTTSTTCCEETTE
T ss_pred C-cCcCcccch-------hHHHHHHHHCCCCCEECcC
Confidence 5 222111100 0001234578888888643
No 37
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=92.35 E-value=0.01 Score=46.61 Aligned_cols=37 Identities=14% Similarity=0.181 Sum_probs=19.3
Q ss_pred eCCCccEEEEeCCCCCce-----ecCCC--CCCCCeeEEEecCCc
Q 046905 177 KFPSLEDLIVTGCCNMKI-----FTSGD--LITPKRVDAWYSESA 214 (225)
Q Consensus 177 ~~p~L~~L~I~~C~~L~~-----lp~~~--~~~~~L~~l~i~~~~ 214 (225)
.+++|++|++++|. +.. +-..+ ...++|+.|+++.+.
T Consensus 241 ~~~~L~~L~Ls~n~-i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~ 284 (344)
T d2ca6a1 241 SWPNLRELGLNDCL-LSARGAAAVVDAFSKLENIGLQTLRLQYNE 284 (344)
T ss_dssp GCTTCCEEECTTCC-CCHHHHHHHHHHHHTCSSCCCCEEECCSSC
T ss_pred ccccchhhhhhcCc-cCchhhHHHHHHhhhccCCCCCEEECCCCc
Confidence 45677777777774 321 11111 123567777776543
No 38
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=86.16 E-value=0.063 Score=37.55 Aligned_cols=37 Identities=8% Similarity=0.082 Sum_probs=17.2
Q ss_pred cccceEeccCccCccccCC---chHHhhcccCCEEEEecCc
Q 046905 86 GNLTHLVVFSCKKLMNLVP---SSVAKSLERLVTLRVSGCS 123 (225)
Q Consensus 86 ~~L~~L~i~~C~~L~~l~~---~~~~~~l~~L~~L~I~~C~ 123 (225)
++|++|++++| .+..-.. ...+...+.|++|++++|.
T Consensus 44 ~~L~~L~Ls~n-~l~~~~~~~la~~L~~n~~L~~L~L~~n~ 83 (167)
T d1pgva_ 44 KHIEKFSLANT-AISDSEARGLIELIETSPSLRVLNVESNF 83 (167)
T ss_dssp SCCCEEECTTS-CCBHHHHTTHHHHHHHCSSCCEEECCSSB
T ss_pred Cccceeecccc-ccchhHHHHHhhhhhhcccccceeeehhh
Confidence 45666666665 2332100 1122334556666666653
No 39
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=80.78 E-value=0.17 Score=35.06 Aligned_cols=38 Identities=13% Similarity=0.074 Sum_probs=17.5
Q ss_pred ccccceEeccCccCccccCCc---hHHhhcccCCEEEEecCc
Q 046905 85 FGNLTHLVVFSCKKLMNLVPS---SVAKSLERLVTLRVSGCS 123 (225)
Q Consensus 85 l~~L~~L~i~~C~~L~~l~~~---~~~~~l~~L~~L~I~~C~ 123 (225)
.++|++|++++| .+...... ..+...++++.+++.+|.
T Consensus 45 n~~L~~L~Ls~n-~l~~~~~~~L~~~l~~~~~l~~l~l~~~~ 85 (166)
T d1io0a_ 45 NTYVKKFSIVGT-RSNDPVAFALAEMLKVNNTLKSLNVESNF 85 (166)
T ss_dssp CCSCCEEECTTS-CCCHHHHHHHHHHHHHCSSCCEEECCSSC
T ss_pred CCccCeeeccCC-cccHHHHHHHHHHHhhcccchhhhhcccc
Confidence 455666666665 33221111 122334556666655553
No 40
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=79.72 E-value=0.2 Score=38.78 Aligned_cols=144 Identities=17% Similarity=0.087 Sum_probs=78.5
Q ss_pred ccCccEEEEeeCCccccC---CHhHHHhccCCcEEEE-eccccceEeccCCcccccccccccccccccccccceEeccCc
Q 046905 21 FGRLRRLEVVRDDVATGF---PVGLLEVLHSLETLHL-SCTSYKEIFSNEGCLESHVGVSKLALIKISFGNLTHLVVFSC 96 (225)
Q Consensus 21 l~~L~~L~l~~~~~~~~~---p~~~~~~l~~L~~L~l-~c~~l~~~~~~~~~~~~~l~~~~l~~~~~~l~~L~~L~i~~C 96 (225)
.+.|+.+.+.++...... -...+...+.|++|++ +|. +... +... .+......+++|+.|+++++
T Consensus 157 ~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~-i~~~----g~~~------~l~~~l~~~~~L~~L~Ls~N 225 (344)
T d2ca6a1 157 APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNG-IRPE----GIEH------LLLEGLAYCQELKVLDLQDN 225 (344)
T ss_dssp CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSC-CCHH----HHHH------HHHTTGGGCTTCCEEECCSS
T ss_pred Ccccceeecccccccccccccccchhhhhhhhccccccccc-cccc----cccc------chhhhhcchhhhcccccccc
Confidence 567888888764322111 1122456889999999 663 2211 0000 00112335788999999987
Q ss_pred cCccccCC---chHHhhcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCcCCCcce-----ee
Q 046905 97 KKLMNLVP---SSVAKSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLDLENLTS-----FC 168 (225)
Q Consensus 97 ~~L~~l~~---~~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~~~~L~~-----~~ 168 (225)
. +..... ...+...++|++|++++|. +.......-. ........+.|++|.++++. +.. +.
T Consensus 226 ~-i~~~g~~~L~~~l~~~~~L~~L~Ls~n~-i~~~g~~~l~--------~~l~~~~~~~L~~L~ls~N~-i~~~~~~~l~ 294 (344)
T d2ca6a1 226 T-FTHLGSSALAIALKSWPNLRELGLNDCL-LSARGAAAVV--------DAFSKLENIGLQTLRLQYNE-IELDAVRTLK 294 (344)
T ss_dssp C-CHHHHHHHHHHHGGGCTTCCEEECTTCC-CCHHHHHHHH--------HHHHTCSSCCCCEEECCSSC-CBHHHHHHHH
T ss_pred c-ccccccccccccccccccchhhhhhcCc-cCchhhHHHH--------HHhhhccCCCCCEEECCCCc-CChHHHHHHH
Confidence 4 332210 1234567899999999986 3221100000 00111245789999998874 543 22
Q ss_pred cCCCccceeCCCccEEEEeCC
Q 046905 169 SGVVDYTFKFPSLEDLIVTGC 189 (225)
Q Consensus 169 ~~~~~~~~~~p~L~~L~I~~C 189 (225)
.. .....+.|++|++++.
T Consensus 295 ~~---l~~~~~~L~~L~l~~N 312 (344)
T d2ca6a1 295 TV---IDEKMPDLLFLELNGN 312 (344)
T ss_dssp HH---HHHHCTTCCEEECTTS
T ss_pred HH---HHccCCCCCEEECCCC
Confidence 11 0114678999998774
No 41
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=70.37 E-value=0.28 Score=34.02 Aligned_cols=113 Identities=11% Similarity=-0.017 Sum_probs=65.1
Q ss_pred cccccceEeccCccCccccCCc---hHHhhcccCCEEEEecCcccccccccccCCCCCcccccccccccccccceeecCc
Q 046905 84 SFGNLTHLVVFSCKKLMNLVPS---SVAKSLERLVTLRVSGCSAMTQVVASCDQGDSDVAGANLEEEILFSKLRYMTMLD 160 (225)
Q Consensus 84 ~l~~L~~L~i~~C~~L~~l~~~---~~~~~l~~L~~L~I~~C~~L~~l~~~~~~~~~~~~~~~~~~~~~~p~L~~L~l~~ 160 (225)
..+.|+.|++.++..+..-... ..+...++|++|++++|. +..-....- .......+.|++|.+.+
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~-l~~~~~~~l----------a~~L~~n~~L~~L~L~~ 81 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTA-ISDSEARGL----------IELIETSPSLRVLNVES 81 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSC-CBHHHHTTH----------HHHHHHCSSCCEEECCS
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccc-cchhHHHHH----------hhhhhhcccccceeeeh
Confidence 3588999999988766543211 223456889999999885 321100000 01223457899999988
Q ss_pred CCCcce-----eecCCCccceeCCCccEEEEeCCC--CCc-----eecCCCCCCCCeeEEEecC
Q 046905 161 LENLTS-----FCSGVVDYTFKFPSLEDLIVTGCC--NMK-----IFTSGDLITPKRVDAWYSE 212 (225)
Q Consensus 161 ~~~L~~-----~~~~~~~~~~~~p~L~~L~I~~C~--~L~-----~lp~~~~~~~~L~~l~i~~ 212 (225)
+. +.. +... ...-++|++|++.++. .+. .+...+..-++|+.+.++.
T Consensus 82 n~-i~~~g~~~l~~a----L~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~ 140 (167)
T d1pgva_ 82 NF-LTPELLARLLRS----TLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISF 140 (167)
T ss_dssp SB-CCHHHHHHHHHH----TTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCC
T ss_pred hh-cchHHHHHHHHH----HHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcC
Confidence 83 332 1111 1235789999998763 221 1222223346788887754
No 42
>d1igra2 c.10.2.5 (A:300-478) Type 1 insulin-like growth factor receptor extracellular domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.82 E-value=47 Score=22.51 Aligned_cols=27 Identities=19% Similarity=0.283 Sum_probs=12.7
Q ss_pred ccccce----EeccCccCccccCCchHHhhcccCCEE
Q 046905 85 FGNLTH----LVVFSCKKLMNLVPSSVAKSLERLVTL 117 (225)
Q Consensus 85 l~~L~~----L~i~~C~~L~~l~~~~~~~~l~~L~~L 117 (225)
|++++. |.|...+.|+++ ..|++|+.+
T Consensus 49 l~~l~eItGyL~I~~s~~L~sL------~fL~nL~~I 79 (179)
T d1igra2 49 MGLIEVVTGYVKIRHSHALVSL------SFLKNLRLI 79 (179)
T ss_dssp HTTCCEESSCEEEESCTTCSCS------TTCCSCCEE
T ss_pred cCCcEEEEEEEEEEEcCCccch------hhhcCccEE
Confidence 455544 345544444433 235555554
Done!