BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046907
(345 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 141/299 (47%), Gaps = 42/299 (14%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G GG G+VYK L +G ++++K++ K+ R E+
Sbjct: 46 LGRGGFGKVYKGRLA--DGTLVAVKRL-------------------KEERXQGGEL---- 80
Query: 116 KMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLL---YILN-DVSQGRRE-------LD 164
Q Q+E+ + HRNL L P LL Y+ N V+ RE LD
Sbjct: 81 ---QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLD 137
Query: 165 WLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHT 224
W R RIALG A GL YLH H P+IIHR EA + FG A+ +
Sbjct: 138 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 197
Query: 225 HITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSD-KFFQHTNEMSF 282
H+ + V GT+ +IAPEYL +EK D++ +G +L L+ G+ D + +++
Sbjct: 198 HVXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 283 VKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLS 341
+ W++ ++ + + +D L GN +E++ ++++A CT P ERP +V RML
Sbjct: 257 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 140/299 (46%), Gaps = 42/299 (14%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G GG G+VYK L +G ++++K++ K+ R E+
Sbjct: 38 LGRGGFGKVYKGRLA--DGXLVAVKRL-------------------KEERTQGGEL---- 72
Query: 116 KMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLL---YILN-DVSQGRRE-------LD 164
Q Q+E+ + HRNL L P LL Y+ N V+ RE LD
Sbjct: 73 ---QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLD 129
Query: 165 WLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHT 224
W R RIALG A GL YLH H P+IIHR EA + FG A+ +
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 189
Query: 225 HITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSD-KFFQHTNEMSF 282
H+ + V G + +IAPEYL +EK D++ +G +L L+ G+ D + +++
Sbjct: 190 HVXXA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 283 VKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLS 341
+ W++ ++ + + +D L GN +E++ ++++A CT P ERP +V RML
Sbjct: 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 134/301 (44%), Gaps = 46/301 (15%)
Query: 55 KIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN 114
K+G GG G VYK + N +++KK+ AA+++ + ++++Q
Sbjct: 38 KMGEGGFGVVYKGYV---NNTTVAVKKL-------AAMVD----ITTEELKQ-------- 75
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPD--CHLLYI-------LNDVS--QGRREL 163
Q EI + + +H NL LL + D C L+Y+ L+ +S G L
Sbjct: 76 ----QFDQEIKVMAKCQHENLVELLGFSSDGDDLC-LVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 164 DWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAH 223
W R +IA G A G+ +LH +H IHR A+IS FG ARA
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 224 THITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
+ S +VGT Y+APE L+ +T K DIY FG +L ++ G LP+ +H
Sbjct: 188 QTVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG-LPA--VDEHREPQLL 243
Query: 283 VKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQ 342
+ + E K + + + + +A C E N+RP+ K V+++L +
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
Query: 343 I 343
+
Sbjct: 304 M 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 133/301 (44%), Gaps = 46/301 (15%)
Query: 55 KIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN 114
K+G GG G VYK + N +++KK+ AA+++ + ++++Q
Sbjct: 32 KMGEGGFGVVYKGYV---NNTTVAVKKL-------AAMVD----ITTEELKQ-------- 69
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPD--CHLLYI-------LNDVS--QGRREL 163
Q EI + + +H NL LL + D C L+Y+ L+ +S G L
Sbjct: 70 ----QFDQEIKVMAKCQHENLVELLGFSSDGDDLC-LVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 164 DWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAH 223
W R +IA G A G+ +LH +H IHR A+IS FG ARA
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 224 THITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
+ +VGT Y+APE L+ +T K DIY FG +L ++ G D+ ++
Sbjct: 182 QXVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDE--HREPQLLL 238
Query: 283 VKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQ 342
+ + ID K+ + + + +A C E N+RP+ K V+++L +
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 297
Query: 343 I 343
+
Sbjct: 298 M 298
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 46/301 (15%)
Query: 55 KIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN 114
K+G GG G VYK + N +++KK+ AA+++ + ++++Q
Sbjct: 38 KMGEGGFGVVYKGYV---NNTTVAVKKL-------AAMVD----ITTEELKQ-------- 75
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPD--CHLLYI-------LNDVS--QGRREL 163
Q EI + + +H NL LL + D C L+Y+ L+ +S G L
Sbjct: 76 ----QFDQEIKVMAKCQHENLVELLGFSSDGDDLC-LVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 164 DWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAH 223
W R +IA G A G+ +LH +H IHR A+IS FG ARA
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 224 THITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
+ +VGT Y+APE L+ +T K DIY FG +L ++ G LP+ +H
Sbjct: 188 QTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG-LPA--VDEHREPQLL 243
Query: 283 VKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQ 342
+ + E K + + + + +A C E N+RP+ K V+++L +
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
Query: 343 I 343
+
Sbjct: 304 M 304
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 55 KIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN 114
K G GG G VYK + N +++KK+ AA+++ I +E L
Sbjct: 29 KXGEGGFGVVYKGYV---NNTTVAVKKL-------AAMVD------------ITTEEL-- 64
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPD--CHLLYI-------LNDVS--QGRREL 163
+Q EI + +H NL LL + D C L+Y+ L+ +S G L
Sbjct: 65 --KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLC-LVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 164 DWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAH 223
W R +IA G A G+ +LH +H IHR A+IS FG ARA
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 224 THITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
+ S +VGT Y APE L+ +T K DIY FG +L ++ G LP+ +H
Sbjct: 179 QXVXXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG-LPA--VDEHREPQLL 234
Query: 283 VKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQ 342
+ + E K + + +A C E N+RP+ K V+++L +
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 54 EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLL 113
EKIG+G G V++AE G + +++K L+E+D +++ + E+ +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSD---VAVK----------ILMEQD--FHAERVNEFLREVAI 87
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL 173
K++R + + NL + +++R LY L S R +LD R +A
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS---LYRLLHKSGAREQLDERRRLSMAY 144
Query: 174 GLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVG 233
+A G+ YLH + P I+HR ++ FG +R A T +++ + G
Sbjct: 145 DVAKGMNYLHNRNPP-IVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAG 201
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
T E++APE L+ EK D+Y FG +L L + P
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 54 EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLL 113
EKIG+G G V++AE G + +++K L+E+D +++ + E+ +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSD---VAVK----------ILMEQD--FHAERVNEFLREVAI 87
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL 173
K++R + + NL + +++R LY L S R +LD R +A
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS---LYRLLHKSGAREQLDERRRLSMAY 144
Query: 174 GLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVG 233
+A G+ YLH + P I+HR ++ FG +R A + + G
Sbjct: 145 DVAKGMNYLHNRNPP-IVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAG 201
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
T E++APE L+ EK D+Y FG +L L + P
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 137/304 (45%), Gaps = 55/304 (18%)
Query: 54 EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLL 113
++IG GG G V+K GR++ K +V +LI DS + ++EM+
Sbjct: 25 KQIGKGGFGLVHK-------GRLVKDKSVVA----IKSLILGDS--------EGETEMI- 64
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELD------WLA 167
+K ++ Q E+ + + H N+ L + P ++ + R LD W
Sbjct: 65 -EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSV 123
Query: 168 RHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE-----ARISGFGFARAIPDA 222
+ R+ L +A G+EY+ + P I+HR E A+++ FG ++
Sbjct: 124 KLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ--SV 180
Query: 223 HTHITTSNVVGTVEYIAPEYL--QMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNE 279
H + S ++G +++APE + + + TEK D Y F +L ++ G+ P D++ +
Sbjct: 181 H---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY--SYGK 235
Query: 280 MSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRM 339
+ F+ N++ E + I C ++ V+++ C DP +RP+ + +
Sbjct: 236 IKFI----NMIREEGLRPTIPED-----CPPRLRNVIEL---CWSGDPKKRPHFSYIVKE 283
Query: 340 LSQI 343
LS++
Sbjct: 284 LSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 137/304 (45%), Gaps = 55/304 (18%)
Query: 54 EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLL 113
++IG GG G V+K GR++ K +V +LI DS + ++EM+
Sbjct: 25 KQIGKGGFGLVHK-------GRLVKDKSVVA----IKSLILGDS--------EGETEMI- 64
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELD------WLA 167
+K ++ Q E+ + + H N+ L + P ++ + R LD W
Sbjct: 65 -EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSV 123
Query: 168 RHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE-----ARISGFGFARAIPDA 222
+ R+ L +A G+EY+ + P I+HR E A+++ FG ++
Sbjct: 124 KLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ--SV 180
Query: 223 HTHITTSNVVGTVEYIAPEYL--QMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNE 279
H + S ++G +++APE + + + TEK D Y F +L ++ G+ P D++ +
Sbjct: 181 H---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY--SYGK 235
Query: 280 MSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRM 339
+ F+ N++ E + I C ++ V+++ C DP +RP+ + +
Sbjct: 236 IKFI----NMIREEGLRPTIPED-----CPPRLRNVIEL---CWSGDPKKRPHFSYIVKE 283
Query: 340 LSQI 343
LS++
Sbjct: 284 LSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 136/304 (44%), Gaps = 55/304 (18%)
Query: 54 EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLL 113
++IG GG G V+K GR++ K +V +LI DS + ++EM+
Sbjct: 25 KQIGKGGFGLVHK-------GRLVKDKSVVA----IKSLILGDS--------EGETEMI- 64
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELD------WLA 167
+K ++ Q E+ + + H N+ L + P ++ + R LD W
Sbjct: 65 -EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSV 123
Query: 168 RHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE-----ARISGFGFARAIPDA 222
+ R+ L +A G+EY+ + P I+HR E A+++ F ++
Sbjct: 124 KLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ--SV 180
Query: 223 HTHITTSNVVGTVEYIAPEYL--QMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNE 279
H + S ++G +++APE + + + TEK D Y F +L ++ G+ P D++ +
Sbjct: 181 H---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY--SYGK 235
Query: 280 MSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRM 339
+ F+ N++ E + I C ++ V+++ C DP +RP+ + +
Sbjct: 236 IKFI----NMIREEGLRPTIPED-----CPPRLRNVIEL---CWSGDPKKRPHFSYIVKE 283
Query: 340 LSQI 343
LS++
Sbjct: 284 LSEL 287
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
++K+G GG VY AE N + ++IK I PP +
Sbjct: 16 VDKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKE---------------------- 52
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR-I 171
+ +++ + E++ Q+ H+N+ ++ DC+ Y++ + +G +++ H +
Sbjct: 53 --ETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCY--YLVMEYIEGPTLSEYIESHGPL 108
Query: 172 ALGLACG-----LEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHI 226
++ A L+ + H RI+HR +I FG A+A+ + T +
Sbjct: 109 SVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSL 166
Query: 227 TTSN-VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
T +N V+GTV+Y +PE + E DIY G +L +++G+ P
Sbjct: 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPD- 221
+ W R I +G A GL YLH IIHR +I+ FG ++ +
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTEL 192
Query: 222 AHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
TH+ V GT+ YI PEY LTEK D+Y FG +L
Sbjct: 193 GQTHLXXV-VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVL 231
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPD- 221
+ W R I +G A GL YLH IIHR +I+ FG ++ +
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTEL 192
Query: 222 AHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
TH+ V GT+ YI PEY LTEK D+Y FG +L
Sbjct: 193 DQTHLXXV-VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVL 231
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 34/250 (13%)
Query: 104 MRQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYI-----LNDVSQ 158
++QI+SE + + E+ + ++ H N+ L P C ++ L +V
Sbjct: 36 IKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLH 91
Query: 159 GRRELDWL-ARHRIALGLAC--GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEA-RISGFG 214
G L + A H ++ L C G+ YLH +IHR +I FG
Sbjct: 92 GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 151
Query: 215 FARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF 273
A D TH+T N G+ ++APE + +EKCD++ +G +L ++ + P D+
Sbjct: 152 TAC---DIQTHMT--NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
Query: 274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNS 333
R + A N R K + E M C +DP++RP+
Sbjct: 207 GGPA--------FRIMWAVHNGTRPPLIKNLPKPIESLMTR-------CWSKDPSQRPSM 251
Query: 334 KDVRRMLSQI 343
+++ ++++ +
Sbjct: 252 EEIVKIMTHL 261
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 34/250 (13%)
Query: 104 MRQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYI-----LNDVSQ 158
++QI+SE + + E+ + ++ H N+ L P C ++ L +V
Sbjct: 37 IKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLH 92
Query: 159 GRRELDWL-ARHRIALGLAC--GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEA-RISGFG 214
G L + A H ++ L C G+ YLH +IHR +I FG
Sbjct: 93 GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 152
Query: 215 FARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF 273
A D TH+T N G+ ++APE + +EKCD++ +G +L ++ + P D+
Sbjct: 153 TAC---DIQTHMT--NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
Query: 274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNS 333
R + A N R K + E M C +DP++RP+
Sbjct: 208 GGPA--------FRIMWAVHNGTRPPLIKNLPKPIESLMTR-------CWSKDPSQRPSM 252
Query: 334 KDVRRMLSQI 343
+++ ++++ +
Sbjct: 253 EEIVKIMTHL 262
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVG 233
+A + L+ H IIHR ++ FG ARAI D+ +T T+ V+G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGK------LPSDKFFQHTNE 279
T +Y++PE + ++ + D+Y G +L ++ G+ P +QH E
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 118/305 (38%), Gaps = 67/305 (21%)
Query: 50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQS 109
L +E++G+G GEV+ G +++K + M A +
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFL---------------- 56
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH 169
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 57 ------------AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTP 101
Query: 170 R-----------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+A +A G+ ++ + IHR + +I+ FG AR
Sbjct: 102 SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 158
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQH 276
I DA +++ APE + T T K D++ FG LL +V G++P
Sbjct: 159 IEDAEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG---- 213
Query: 277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV 336
M N +N +R + + C E++ ++++ C E P +RP +
Sbjct: 214 ---------MTNPEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYL 260
Query: 337 RRMLS 341
R +L
Sbjct: 261 RSVLE 265
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVG 233
+A + L+ H IIHR ++ FG ARAI D+ +T T+ V+G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
T +Y++PE + ++ + D+Y G +L ++ G+ P
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVG 233
+A + L+ H IIHR ++ FG ARAI D+ +T T+ V+G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
T +Y++PE + ++ + D+Y G +L ++ G+ P
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVG 233
+A + L+ H IIHR ++ FG ARAI D+ +T T+ V+G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
T +Y++PE + ++ + D+Y G +L ++ G+ P
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVG 233
+A + L+ H IIHR ++ FG ARAI D+ +T T+ V+G
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
T +Y++PE + ++ + D+Y G +L ++ G+ P
Sbjct: 199 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 119/305 (39%), Gaps = 67/305 (21%)
Query: 50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQS 109
L +E++G+G GEV+ G +++K + M A +
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFL---------------- 62
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH 169
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 63 ------------AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTP 107
Query: 170 R-----------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+A +A G+ ++ + IHR + +I+ FG AR
Sbjct: 108 SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 164
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQH 276
I D + + +++ APE + T T K D++ FG LL +V G++P
Sbjct: 165 IED-NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG---- 219
Query: 277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV 336
M N +N +R + + C E++ ++++ C E P +RP +
Sbjct: 220 ---------MTNPEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYL 266
Query: 337 RRMLS 341
R +L
Sbjct: 267 RSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 119/305 (39%), Gaps = 67/305 (21%)
Query: 50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQS 109
L +E++G+G GEV+ G +++K + M A +
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFL---------------- 61
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH 169
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 62 ------------AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTP 106
Query: 170 R-----------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+A +A G+ ++ + IHR + +I+ FG AR
Sbjct: 107 SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 163
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQH 276
I D + + +++ APE + T T K D++ FG LL +V G++P
Sbjct: 164 IED-NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG---- 218
Query: 277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV 336
M N +N +R + + C E++ ++++ C E P +RP +
Sbjct: 219 ---------MTNPEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYL 265
Query: 337 RRMLS 341
R +L
Sbjct: 266 RSVLE 270
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 119/307 (38%), Gaps = 67/307 (21%)
Query: 50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQS 109
L +E++G+G GEV+ G +++K + M A +
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFL---------------- 56
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH 169
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 57 ------------AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTP 101
Query: 170 R-----------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+A +A G+ ++ + IHR + +I+ FG AR
Sbjct: 102 SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 158
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQH 276
I D + + +++ APE + T T K D++ FG LL +V G++P
Sbjct: 159 IED-NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG---- 213
Query: 277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV 336
M N +N +R + + C E++ ++++ C E P +RP +
Sbjct: 214 ---------MTNPEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYL 260
Query: 337 RRMLSQI 343
R +L
Sbjct: 261 RSVLEDF 267
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 119/305 (39%), Gaps = 67/305 (21%)
Query: 50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQS 109
L +E++G+G GEV+ G +++K + M A +
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFL---------------- 66
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH 169
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 67 ------------AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTP 111
Query: 170 R-----------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+A +A G+ ++ + IHR + +I+ FG AR
Sbjct: 112 SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 168
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQH 276
I D + + +++ APE + T T K D++ FG LL +V G++P
Sbjct: 169 IED-NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG---- 223
Query: 277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV 336
M N +N +R + + C E++ ++++ C E P +RP +
Sbjct: 224 ---------MTNPEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYL 270
Query: 337 RRMLS 341
R +L
Sbjct: 271 RSVLE 275
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 122/303 (40%), Gaps = 52/303 (17%)
Query: 55 KIGSGGCGEVYKAEL----PGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSE 110
++G G G+V+ AE P ++ ++++K + P + A +K Q ++E
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA------------RKDFQREAE 69
Query: 111 MLLNKKMRQIQSEINTVGQ----------IRHRNLHPLL-AHVTRPDCHLLYILNDVSQG 159
+L N + I G ++H +L+ L AH PD +L + Q
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAH--GPDAMIL-VDGQPRQA 126
Query: 160 RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI 219
+ EL IA +A G+ YL H +HR + +I FG +R +
Sbjct: 127 KGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDV 183
Query: 220 PDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGL-VMGKLPSDKFFQHT 277
+ + + + ++ PE + T + D++ FG +L + GK P +FQ +
Sbjct: 184 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP---WFQLS 240
Query: 278 NEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVR 337
N V+ R ++ V C ++ V + C +P +R N K++
Sbjct: 241 NT--------EVIECITQGRVLERPRV---CPKE---VYDVMLGCWQREPQQRLNIKEIY 286
Query: 338 RML 340
++L
Sbjct: 287 KIL 289
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 119/307 (38%), Gaps = 67/307 (21%)
Query: 50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQS 109
L +E++G+G GEV+ G +++K + M A +
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFL---------------- 51
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH 169
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 52 ------------AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTP 96
Query: 170 R-----------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+A +A G+ ++ + IHR + +I+ FG AR
Sbjct: 97 SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 153
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQH 276
I D + + +++ APE + T T K D++ FG LL +V G++P
Sbjct: 154 IED-NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG---- 208
Query: 277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV 336
M N +N +R + + C E++ ++++ C E P +RP +
Sbjct: 209 ---------MTNPEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYL 255
Query: 337 RRMLSQI 343
R +L
Sbjct: 256 RSVLEDF 262
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 119/307 (38%), Gaps = 67/307 (21%)
Query: 50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQS 109
L +E++G+G GEV+ G +++K + M A +
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFL---------------- 52
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH 169
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 53 ------------AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTP 97
Query: 170 R-----------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+A +A G+ ++ + IHR + +I+ FG AR
Sbjct: 98 SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARL 154
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQH 276
I D + + +++ APE + T T K D++ FG LL +V G++P
Sbjct: 155 IED-NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG---- 209
Query: 277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV 336
M N +N +R + + C E++ ++++ C E P +RP +
Sbjct: 210 ---------MTNPEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYL 256
Query: 337 RRMLSQI 343
R +L
Sbjct: 257 RSVLEDF 263
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 55/239 (23%)
Query: 48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQI 107
G + ++IGSG G VYK + G D A KM +
Sbjct: 10 GQITVGQRIGSGSFGTVYKGKWHG----------------DVAV-----------KMLNV 42
Query: 108 QSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDC-------------HLLYILN 154
+ ++++ ++E+ + + RH N+ + + T+P H L+I+
Sbjct: 43 TAPT--PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE 100
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
+ + +D IA A G++YL H IIHR + +I FG
Sbjct: 101 TKFEMIKLID------IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFG 151
Query: 215 FARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLP 269
A + G++ ++APE ++M + + D+Y FG +L L+ G+LP
Sbjct: 152 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 55/239 (23%)
Query: 48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQI 107
G + ++IGSG G VYK + G D A KM +
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHG----------------DVAV-----------KMLNV 40
Query: 108 QSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDC-------------HLLYILN 154
+ ++++ ++E+ + + RH N+ + + T+P H L+I+
Sbjct: 41 TAPT--PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE 98
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
+ + +D IA A G++YL H IIHR + +I FG
Sbjct: 99 TKFEMIKLID------IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFG 149
Query: 215 FARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLP 269
A + G++ ++APE ++M + + D+Y FG +L L+ G+LP
Sbjct: 150 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 55/239 (23%)
Query: 48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQI 107
G + ++IGSG G VYK + G D A KM +
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHG----------------DVAV-----------KMLNV 45
Query: 108 QSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDC-------------HLLYILN 154
+ ++++ ++E+ + + RH N+ + + T+P H L+I+
Sbjct: 46 TAPT--PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE 103
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
+ + +D IA A G++YL H IIHR + +I FG
Sbjct: 104 TKFEMIKLID------IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFG 154
Query: 215 FARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLP 269
A + G++ ++APE ++M + + D+Y FG +L L+ G+LP
Sbjct: 155 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 55/239 (23%)
Query: 48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQI 107
G + ++IGSG G VYK + G D A KM +
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHG----------------DVAV-----------KMLNV 45
Query: 108 QSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDC-------------HLLYILN 154
+ ++++ ++E+ + + RH N+ + + T+P H L+I+
Sbjct: 46 TAPT--PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE 103
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
+ + +D IA A G++YL H IIHR + +I FG
Sbjct: 104 TKFEMIKLID------IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFG 154
Query: 215 FARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLP 269
A + G++ ++APE ++M + + D+Y FG +L L+ G+LP
Sbjct: 155 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 55/239 (23%)
Query: 48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQI 107
G + ++IGSG G VYK + G D A KM +
Sbjct: 35 GQITVGQRIGSGSFGTVYKGKWHG----------------DVAV-----------KMLNV 67
Query: 108 QSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDC-------------HLLYILN 154
+ ++++ ++E+ + + RH N+ + + T+P H L+I+
Sbjct: 68 TAPT--PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE 125
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
+ + +D IA A G++YL H IIHR + +I FG
Sbjct: 126 TKFEMIKLID------IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFG 176
Query: 215 FARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLP 269
A + G++ ++APE ++M + + D+Y FG +L L+ G+LP
Sbjct: 177 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 55/239 (23%)
Query: 48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQI 107
G + ++IGSG G VYK + G D A KM +
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHG----------------DVAV-----------KMLNV 68
Query: 108 QSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDC-------------HLLYILN 154
+ ++++ ++E+ + + RH N+ + + T+P H L+I+
Sbjct: 69 TAPT--PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE 126
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
+ + +D IA A G++YL H IIHR + +I FG
Sbjct: 127 TKFEMIKLID------IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFG 177
Query: 215 FARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLP 269
A + G++ ++APE ++M + + D+Y FG +L L+ G+LP
Sbjct: 178 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 55/239 (23%)
Query: 48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQI 107
G + ++IGSG G VYK + G D A KM +
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHG----------------DVAV-----------KMLNV 40
Query: 108 QSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDC-------------HLLYILN 154
+ ++++ ++E+ + + RH N+ + + T+P H L+I+
Sbjct: 41 TAPT--PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE 98
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
+ + +D IA A G++YL H IIHR + +I FG
Sbjct: 99 TKFEMIKLID------IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFG 149
Query: 215 FARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLP 269
A + G++ ++APE ++M + + D+Y FG +L L+ G+LP
Sbjct: 150 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 55/239 (23%)
Query: 48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQI 107
G + ++IGSG G VYK + G D A KM +
Sbjct: 28 GQITVGQRIGSGSFGTVYKGKWHG----------------DVAV-----------KMLNV 60
Query: 108 QSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDC-------------HLLYILN 154
+ ++++ ++E+ + + RH N+ + + T+P H L+I+
Sbjct: 61 TAPT--PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE 118
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
+ + +D IA A G++YL H IIHR + +I FG
Sbjct: 119 TKFEMIKLID------IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFG 169
Query: 215 FARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLP 269
A + G++ ++APE ++M + + D+Y FG +L L+ G+LP
Sbjct: 170 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 37/233 (15%)
Query: 122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR----------- 170
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 66 AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
+A +A G+ ++ + IHR + +I+ FG AR I D +
Sbjct: 123 MAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREG 178
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRN 288
+++ APE + T T K D++ FG LL +V G++P M N
Sbjct: 179 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTN 225
Query: 289 VMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLS 341
+N +R + + C E++ ++++ C E P +RP +R +L
Sbjct: 226 PEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 274
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 51/237 (21%)
Query: 55 KIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN 114
+IGSG G VYK + G + I K+V P +
Sbjct: 43 RIGSGSFGTVYKGKWHGDVA--VKILKVVDPTPE-------------------------- 74
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHL---------LYILNDVSQGRRELDW 165
+ + ++E+ + + RH N+ + ++T+ + + LY V + + ++
Sbjct: 75 -QFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQ 133
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L IA A G++YL H IIHR + +I FG A
Sbjct: 134 LI--DIARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188
Query: 226 ITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLPSDKFFQHTN 278
G+V ++APE ++M + + D+Y +G +L L+ G+LP + H N
Sbjct: 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP----YSHIN 241
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 55/239 (23%)
Query: 48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQI 107
G + ++IGSG G VYK + G D A KM +
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHG----------------DVAV-----------KMLNV 68
Query: 108 QSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDC-------------HLLYILN 154
+ ++++ ++E+ + + RH N+ + + T+P H L+I+
Sbjct: 69 TAPT--PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE 126
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
+ + +D IA A G++YL H IIHR + +I FG
Sbjct: 127 TKFEMIKLID------IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFG 177
Query: 215 FARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLP 269
A + G++ ++APE ++M + + D+Y FG +L L+ G+LP
Sbjct: 178 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 37/233 (15%)
Query: 122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR----------- 170
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
+A +A G+ ++ + IHR + +I+ FG AR I D +
Sbjct: 120 MAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREG 175
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRN 288
+++ APE + T T K D++ FG LL +V G++P M N
Sbjct: 176 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTN 222
Query: 289 VMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLS 341
+N +R + + C E++ ++++ C E P +RP +R +L
Sbjct: 223 PEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 271
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 37/233 (15%)
Query: 122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR----------- 170
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 65 AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
+A +A G+ ++ + IHR + +I+ FG AR I D +
Sbjct: 122 MAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREG 177
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRN 288
+++ APE + T T K D++ FG LL +V G++P M N
Sbjct: 178 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTN 224
Query: 289 VMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLS 341
+N +R + + C E++ ++++ C E P +RP +R +L
Sbjct: 225 PEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 273
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 118/307 (38%), Gaps = 67/307 (21%)
Query: 50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQS 109
L +E++G+G GEV+ G +++K + M A +
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFL---------------- 57
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH 169
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 58 ------------AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTP 102
Query: 170 R-----------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+A +A G+ ++ + IHR + +I+ FG AR
Sbjct: 103 SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 159
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQH 276
I D + +++ APE + T T K D++ FG LL +V G++P
Sbjct: 160 IED-NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG---- 214
Query: 277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV 336
M N +N +R + + C E++ ++++ C E P +RP +
Sbjct: 215 ---------MTNPEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYL 261
Query: 337 RRMLSQI 343
R +L
Sbjct: 262 RSVLEDF 268
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G I K A ++++D+ K + + SEM + K
Sbjct: 43 LGEGAFGQVVMAEAVG-----IDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMK 95
Query: 116 KMRQIQSEINTVGQIRHR-------------NLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+ + ++ IN +G NL L P Y +N V + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR RI+ FG AR I +
Sbjct: 156 FKDLVS--CTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
+ T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 276 HTNE 279
E
Sbjct: 271 LLKE 274
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 118/307 (38%), Gaps = 67/307 (21%)
Query: 50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQS 109
L +E++G+G GEV+ G +++K + M A +
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFL---------------- 56
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH 169
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 57 ------------AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTP 101
Query: 170 R-----------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+A +A G+ ++ + IHR + +I+ FG AR
Sbjct: 102 SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 158
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQH 276
I D + +++ APE + T T K D++ FG LL +V G++P
Sbjct: 159 IED-NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG---- 213
Query: 277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV 336
M N +N +R + + C E++ ++++ C E P +RP +
Sbjct: 214 ---------MTNPEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYL 260
Query: 337 RRMLSQI 343
R +L
Sbjct: 261 RSVLEDF 267
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVG 233
+A + L+ H IIHR ++ FG ARAI D+ + T+ V+G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
T +Y++PE + ++ + D+Y G +L ++ G+ P
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 118/307 (38%), Gaps = 67/307 (21%)
Query: 50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQS 109
L +E++G+G GEV+ G +++K + M A +
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFL---------------- 58
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH 169
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 59 ------------AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTP 103
Query: 170 R-----------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+A +A G+ ++ + IHR + +I+ FG AR
Sbjct: 104 SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 160
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQH 276
I D + +++ APE + T T K D++ FG LL +V G++P
Sbjct: 161 IED-NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG---- 215
Query: 277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV 336
M N +N +R + + C E++ ++++ C E P +RP +
Sbjct: 216 ---------MTNPEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYL 262
Query: 337 RRMLSQI 343
R +L
Sbjct: 263 RSVLEDF 269
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 118/305 (38%), Gaps = 67/305 (21%)
Query: 50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQS 109
L +E++G+G GEV+ G +++K + M A +
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFL---------------- 56
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH 169
+E N + Q++H+ L L A VT+ +YI+ + + +D+L
Sbjct: 57 ------------AEANLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTP 101
Query: 170 R-----------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+A +A G+ ++ + IHR + +I+ FG AR
Sbjct: 102 SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 158
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQH 276
I D + +++ APE + T T K D++ FG LL +V G++P
Sbjct: 159 IED-NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG---- 213
Query: 277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV 336
M N +N +R + + C E++ ++++ C E P +RP +
Sbjct: 214 ---------MTNPEVIQNLERGY-RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYL 260
Query: 337 RRMLS 341
R +L
Sbjct: 261 RSVLE 265
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G I K A ++++D+ K + + SEM + K
Sbjct: 43 LGEGAFGQVVMAEAVG-----IDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMK 95
Query: 116 KMRQIQSEINTVGQIRHRN-LHPLLAHVTR------------PDCHLLYILNDVSQGRRE 162
+ + ++ IN +G L+ ++A+ ++ P Y +N V + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR +I+ FG AR I +
Sbjct: 156 FKDLVS--CTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
+ T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 276 HTNE 279
E
Sbjct: 271 LLKE 274
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 82/220 (37%), Gaps = 40/220 (18%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LEK+G G G V + E +G+ +S+ A ++ D + Q E
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDVL--------SQPE-- 63
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH--- 169
M E+N + + HRNL L V P ++ L + LD L +H
Sbjct: 64 ---AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS---LLDRLRKHQGH 117
Query: 170 -------RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
R A+ +A G+ YL R IHR +I FG RA+P
Sbjct: 118 FLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174
Query: 223 HTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
H + + + APE L+ T + D + FG L
Sbjct: 175 DDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 82/220 (37%), Gaps = 40/220 (18%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LEK+G G G V + E +G+ +S+ A ++ D + Q E
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDVL--------SQPE-- 53
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH--- 169
M E+N + + HRNL L V P ++ L + LD L +H
Sbjct: 54 ---AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS---LLDRLRKHQGH 107
Query: 170 -------RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
R A+ +A G+ YL R IHR +I FG RA+P
Sbjct: 108 FLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
Query: 223 HTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
H + + + APE L+ T + D + FG L
Sbjct: 165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 82/220 (37%), Gaps = 40/220 (18%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LEK+G G G V + E +G+ +S+ A ++ D + Q E
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDVL--------SQPE-- 53
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH--- 169
M E+N + + HRNL L V P ++ L + LD L +H
Sbjct: 54 ---AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS---LLDRLRKHQGH 107
Query: 170 -------RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
R A+ +A G+ YL R IHR +I FG RA+P
Sbjct: 108 FLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
Query: 223 HTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
H + + + APE L+ T + D + FG L
Sbjct: 165 DDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 82/220 (37%), Gaps = 40/220 (18%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LEK+G G G V + E +G+ +S+ A ++ D + Q E
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDVL--------SQPE-- 63
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH--- 169
M E+N + + HRNL L V P ++ L + LD L +H
Sbjct: 64 ---AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS---LLDRLRKHQGH 117
Query: 170 -------RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
R A+ +A G+ YL R IHR +I FG RA+P
Sbjct: 118 FLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174
Query: 223 HTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
H + + + APE L+ T + D + FG L
Sbjct: 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 82/220 (37%), Gaps = 40/220 (18%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LEK+G G G V + E +G+ +S+ A ++ D + Q E
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDVL--------SQPE-- 53
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH--- 169
M E+N + + HRNL L V P ++ L + LD L +H
Sbjct: 54 ---AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS---LLDRLRKHQGH 107
Query: 170 -------RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
R A+ +A G+ YL R IHR +I FG RA+P
Sbjct: 108 FLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
Query: 223 HTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
H + + + APE L+ T + D + FG L
Sbjct: 165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 88/235 (37%), Gaps = 40/235 (17%)
Query: 38 AKDLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDS 97
++ L L + L LEK+G G G V + E +G+ +S+ A ++ D
Sbjct: 2 SQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDV 52
Query: 98 MLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVS 157
+ Q E M E+N + + HRNL L V P ++ L +
Sbjct: 53 L--------SQPE-----AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLG 99
Query: 158 QGRRELDWLARH----------RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE 207
LD L +H R A+ +A G+ YL R IHR
Sbjct: 100 S---LLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDL 153
Query: 208 ARISGFGFARAIPDAHTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
+I FG RA+P H + + + APE L+ T + D + FG L
Sbjct: 154 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 208
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 88/235 (37%), Gaps = 40/235 (17%)
Query: 38 AKDLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDS 97
++ L L + L LEK+G G G V + E +G+ +S+ A ++ D
Sbjct: 2 SQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDV 52
Query: 98 MLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVS 157
+ Q E M E+N + + HRNL L V P ++ L +
Sbjct: 53 L--------SQPE-----AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLG 99
Query: 158 QGRRELDWLARH----------RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE 207
LD L +H R A+ +A G+ YL R IHR
Sbjct: 100 S---LLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDL 153
Query: 208 ARISGFGFARAIPDAHTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
+I FG RA+P H + + + APE L+ T + D + FG L
Sbjct: 154 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 208
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G I K A ++++D+ K + + SEM + K
Sbjct: 43 LGEGAFGQVVMAEAVG-----IDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMK 95
Query: 116 KMRQIQSEIN-------------TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+ + ++ IN VG NL L P Y +N V + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR +I+ FG AR I +
Sbjct: 156 FKDLVS--CTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
+ T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 276 HTNE 279
E
Sbjct: 271 LLKE 274
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 34/186 (18%)
Query: 117 MRQIQSEINT-VGQIRHRN---------LHPLLAHV--TRPDCHLLYILNDVSQGRRELD 164
M+ ++ EI + Q+ H N HP + + T D ++++ D +G
Sbjct: 36 MKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS 95
Query: 165 WLARHR---------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGF 215
L + + A + LEYLH II+R +I+ FGF
Sbjct: 96 LLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGF 152
Query: 216 ARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFF 274
A+ +PD T + GT +YIAPE + + D + FG L+ ++ G P F
Sbjct: 153 AKYVPDV-----TYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP----F 203
Query: 275 QHTNEM 280
+N M
Sbjct: 204 YDSNTM 209
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQI 107
G + ++IGSG G VYK + G +++K +LN
Sbjct: 12 GQITVGQRIGSGSFGTVYKGKWHGD----VAVK------------------MLNVTAPTP 49
Query: 108 QSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHL---------LYILNDVSQ 158
Q +++ ++E+ + + RH N+ + + T+P + LY S+
Sbjct: 50 Q-------QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASE 102
Query: 159 GRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+ E+ L IA A G++YL H IIHR +I FG A
Sbjct: 103 TKFEMKKLI--DIARQTARGMDYL---HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATV 157
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLP 269
+ G++ ++APE ++M + + D+Y FG +L L+ G+LP
Sbjct: 158 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + +++ GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGT 169
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 230 TEGARDLISRLLKHNPSQRPML 251
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G I K A ++++D+ K + + SEM + K
Sbjct: 43 LGEGAFGQVVMAEAVG-----IDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMK 95
Query: 116 KMRQIQSEINTVGQIRHR-------------NLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+ + ++ IN +G NL L P Y +N V + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR +I+ FG AR I +
Sbjct: 156 FKDLVS--CTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
+ T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 276 HTNE 279
E
Sbjct: 271 LLKE 274
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + +++ GT
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGT 170
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 230
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 231 TEGARDLISRLLKHNPSQRPML 252
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + +++ GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGT 174
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 234
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 235 TEGARDLISRLLKHNPSQRPML 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + +++ GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGT 169
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 230 TEGARDLISRLLKHNPSQRPML 251
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQI 107
G + ++IGSG G VYK + G +++K +LN
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGD----VAVK------------------MLNVTAPTP 61
Query: 108 QSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHL---------LYILNDVSQ 158
Q +++ ++E+ + + RH N+ + + T+P + LY S+
Sbjct: 62 Q-------QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASE 114
Query: 159 GRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+ E+ L IA A G++YL H IIHR +I FG A
Sbjct: 115 TKFEMKKLI--DIARQTARGMDYL---HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLP 269
+ G++ ++APE ++M + + D+Y FG +L L+ G+LP
Sbjct: 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGT 172
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 232
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 233 TEGARDLISRLLKHNPSQRPML 254
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGT 171
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 231
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 232 TEGARDLISRLLKHNPSQRPML 253
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 26/184 (14%)
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH---- 169
NK I E+ + ++ H N+ L + D YI+ ++ G D + +
Sbjct: 62 NKDTSTILREVELLKKLDHPNIMKLFEIL--EDSSSFYIVGELYTGGELFDEIIKRKRFS 119
Query: 170 -----RIALGLACGLEYLHMHHCPRIIHRX---XXXXXXXXXXXIEARISGFGFARAIPD 221
RI + G+ Y+H H+ I+HR + +I FG +
Sbjct: 120 EHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-- 174
Query: 222 AHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEM 280
+ + +GT YIAPE L+ T EKCD++ G +L L+ G P F NE
Sbjct: 175 -QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP----FYGKNEY 228
Query: 281 SFVK 284
+K
Sbjct: 229 DILK 232
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 112
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 113 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 168
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 228
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 229 TEGARDLISRLLKHNPSQRPML 250
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 174
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 234
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 235 TEGARDLISRLLKHNPSQRPML 256
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 169
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 230 TEGARDLISRLLKHNPSQRPML 251
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + ++ GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCGT 172
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 232
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 233 TEGARDLISRLLKHNPSQRPML 254
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 139
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 195
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 255
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 256 TEGARDLISRLLKHNPSQRPML 277
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGT 169
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 230 TEGARDLISRLLKHNPSQRPML 251
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 172
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 232
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 233 TEGARDLISRLLKHNPSQRPML 254
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 139
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + ++ GT
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCGT 195
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 255
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 256 TEGARDLISRLLKHNPSQRPML 277
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 117
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 173
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 233
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 234 TEGARDLISRLLKHNPSQRPML 255
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 172
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 232
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 233 TEGARDLISRLLKHNPSQRPML 254
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYIL------NDVSQGRRELDWLARHRIA 172
Q++ E+ +RH N+ L + D +Y++ +V + ++L R A
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFH--DATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 173 LGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVV 232
+ L H R+IHR E +I+ FG++ P + + +
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLC 172
Query: 233 GTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNV 289
GT++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 290 MASENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 233 FVTEGARDLISRLLKHNPSQRPML 256
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 110
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 111 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 166
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 167 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 226
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 227 TEGARDLISRLLKHNPSQRPML 248
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 132/319 (41%), Gaps = 83/319 (26%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LEK+G G G VYKA+ GR++++K+I +DA ED + + +R
Sbjct: 26 LEKVGEGTYGVVYKAK--DSQGRIVALKRIR---LDA-----EDEGIPSTAIR------- 68
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLY----------ILNDVSQGRRE 162
EI+ + ++ H N+ L+ + C L +L++ G ++
Sbjct: 69 ----------EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQD 118
Query: 163 LDWLARHRIAL-GLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA--I 219
++ +I L L G+ + H H RI+HR +++ FG ARA I
Sbjct: 119 ----SQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171
Query: 220 P-DAHTHITTSNVVGTVEYIAPEYLQ-MLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQH 276
P ++TH V T+ Y AP+ L + DI+ G + A ++ GK F
Sbjct: 172 PVRSYTH-----EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK----PLFPG 222
Query: 277 TNEMSFVKWMRNVMASENPKRAID--------------------SKLVGNGCEEQMLLVL 316
+ + + +++ + NP+ S ++ C+E + L+
Sbjct: 223 VTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLS 282
Query: 317 KIACFCTLEDPNERPNSKD 335
+ CF DPN+R +++D
Sbjct: 283 NMLCF----DPNKRISARD 297
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 24/183 (13%)
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH---- 169
NK I E+ + ++ H N+ L + D YI+ ++ G D + +
Sbjct: 62 NKDTSTILREVELLKKLDHPNIMKLFEIL--EDSSSFYIVGELYTGGELFDEIIKRKRFS 119
Query: 170 -----RIALGLACGLEYLHMHHCPRIIHRX---XXXXXXXXXXXIEARISGFGFARAIPD 221
RI + G+ Y+H H+ I+HR + +I FG +
Sbjct: 120 EHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-- 174
Query: 222 AHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVMGKLPSDKFFQHTNEMS 281
+ + +GT YIAPE L+ T EKCD++ ++ +++ P F NE
Sbjct: 175 -QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP---FYGKNEYD 229
Query: 282 FVK 284
+K
Sbjct: 230 ILK 232
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 132/319 (41%), Gaps = 83/319 (26%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LEK+G G G VYKA+ GR++++K+I +DA ED + + +R
Sbjct: 26 LEKVGEGTYGVVYKAK--DSQGRIVALKRIR---LDA-----EDEGIPSTAIR------- 68
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLY----------ILNDVSQGRRE 162
EI+ + ++ H N+ L+ + C L +L++ G ++
Sbjct: 69 ----------EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQD 118
Query: 163 LDWLARHRIAL-GLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA--I 219
++ +I L L G+ + H H RI+HR +++ FG ARA I
Sbjct: 119 ----SQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171
Query: 220 P-DAHTHITTSNVVGTVEYIAPEYLQ-MLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQH 276
P ++TH V T+ Y AP+ L + DI+ G + A ++ GK F
Sbjct: 172 PVRSYTH-----EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK----PLFPG 222
Query: 277 TNEMSFVKWMRNVMASENPKRAID--------------------SKLVGNGCEEQMLLVL 316
+ + + +++ + NP+ S ++ C+E + L+
Sbjct: 223 VTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLS 282
Query: 317 KIACFCTLEDPNERPNSKD 335
+ CF DPN+R +++D
Sbjct: 283 NMLCF----DPNKRISARD 297
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 130
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 131 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 186
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 246
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 247 TEGARDLISRLLKHNPSQRPML 268
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 24/183 (13%)
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH---- 169
NK I E+ + ++ H N+ L + D YI+ ++ G D + +
Sbjct: 62 NKDTSTILREVELLKKLDHPNIMKLFEIL--EDSSSFYIVGELYTGGELFDEIIKRKRFS 119
Query: 170 -----RIALGLACGLEYLHMHHCPRIIHRX---XXXXXXXXXXXIEARISGFGFARAIPD 221
RI + G+ Y+H H+ I+HR + +I FG +
Sbjct: 120 EHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-- 174
Query: 222 AHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVMGKLPSDKFFQHTNEMS 281
+ + +GT YIAPE L+ T EKCD++ ++ +++ P F NE
Sbjct: 175 -QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP---FYGKNEYD 229
Query: 282 FVK 284
+K
Sbjct: 230 ILK 232
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGT 169
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 230 TEGARDLISRLLKHNPSQRPML 251
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 93/244 (38%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G I K A ++++D+ K + + SEM + K
Sbjct: 43 LGEGAFGQVVMAEAVG-----IDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMK 95
Query: 116 KMRQIQSEINTVGQIRHR-------------NLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+ + ++ IN +G NL L P Y +N V + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR +I+ FG AR I +
Sbjct: 156 FKDLVS--CTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 276 HTNE 279
E
Sbjct: 271 LLKE 274
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G I K A ++++D+ K + + SEM + K
Sbjct: 30 LGEGCFGQVVMAEAVG-----IDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMK 82
Query: 116 KMRQIQSEINTVGQIRHR-------------NLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+ + ++ IN +G NL L P Y +N V + +
Sbjct: 83 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 142
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR +I+ FG AR I +
Sbjct: 143 FKDLVS--CTYQLARGMEYLASQKC---IHRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
+ T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 257
Query: 276 HTNE 279
E
Sbjct: 258 LLKE 261
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + GT
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGT 170
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 230
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 231 TEGARDLISRLLKHNPSQRPML 252
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 93/244 (38%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G I K A ++++D+ K + + SEM + K
Sbjct: 43 LGEGAFGQVVMAEAVG-----IDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMK 95
Query: 116 KMRQIQSEINTVGQIRHR-------------NLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+ + ++ IN +G NL L P Y +N V + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMT 155
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR +I+ FG AR I +
Sbjct: 156 FKDLVS--CTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 276 HTNE 279
E
Sbjct: 271 LLKE 274
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G I K A ++++D+ K + + SEM + K
Sbjct: 32 LGEGCFGQVVMAEAVG-----IDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMK 84
Query: 116 KMRQIQSEINTVGQIRHR-------------NLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+ + ++ IN +G NL L P Y +N V + +
Sbjct: 85 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 144
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR +I+ FG AR I +
Sbjct: 145 FKDLVS--CTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
+ T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 259
Query: 276 HTNE 279
E
Sbjct: 260 LLKE 263
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 96/238 (40%), Gaps = 59/238 (24%)
Query: 54 EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLL 113
E IG GG G+VY+A G +++K P +ED +
Sbjct: 13 EIIGIGGFGKVYRAFWIGDE---VAVKAARHDP-------DED----------------I 46
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAH-VTRPDCHLLY------ILNDVSQGRR----- 161
++ + ++ E ++H N+ L + P+ L+ LN V G+R
Sbjct: 47 SQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI 106
Query: 162 ELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEA--------RISGF 213
++W A+ +A G+ YLH IIHR +E +I+ F
Sbjct: 107 LVNW------AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160
Query: 214 GFARAIPDAHTHITTS-NVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
G AR H TT + G ++APE ++ ++ D++ +G LL L+ G++P
Sbjct: 161 GLAR-----EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR----TTLSGT 170
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 230
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 231 TEGARDLISRLLKHNPSQRPML 252
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGT 169
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 230 TEGARDLISRLLKHNPSQRPML 251
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G I K A ++++D+ K + + SEM + K
Sbjct: 35 LGEGCFGQVVMAEAVG-----IDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMK 87
Query: 116 KMRQIQSEINTVGQIRHR-------------NLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+ + ++ IN +G NL L P Y +N V + +
Sbjct: 88 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 147
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR +I+ FG AR I +
Sbjct: 148 FKDLVS--CTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
+ T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 262
Query: 276 HTNE 279
E
Sbjct: 263 LLKE 266
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G I K A ++++D+ K + + SEM + K
Sbjct: 89 LGEGCFGQVVMAEAVG-----IDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMK 141
Query: 116 KMRQIQSEINTVGQIRHR-------------NLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+ + ++ IN +G NL L P Y +N V + +
Sbjct: 142 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR +I+ FG AR I +
Sbjct: 202 FKDLVS--CTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
+ T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316
Query: 276 HTNE 279
E
Sbjct: 317 LLKE 320
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 90/244 (36%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G + V M EED + + SEM + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEED-------LSDLVSEMEMMK 95
Query: 116 KMRQIQSEINTVGQIRHR-------------NLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+ + ++ IN +G NL L P Y +N V + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR +I+ FG AR I +
Sbjct: 156 FKDLVS--CTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
+ T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 276 HTNE 279
E
Sbjct: 271 LLKE 274
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGT 172
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 232
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 233 TEGARDLISRLLKHNPSQRPML 254
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A + CGLE LH RI++R RIS G A +P+ T
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGR 345
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
VGTV Y+APE ++ T D + G LL ++ G+ P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A + CGLE LH RI++R RIS G A +P+ T
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGR 345
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
VGTV Y+APE ++ T D + G LL ++ G+ P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYI------LNDVSQGRRELDWLARHRIA 172
+++ EI+ + +RH ++ L +T P ++ I L D ++ + R
Sbjct: 55 RVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFF 114
Query: 173 LGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVV 232
+ C +EY H H +I+HR + +I+ FG + + D + T+
Sbjct: 115 QQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC--- 168
Query: 233 GTVEYIAPEYLQ-MLTLTEKCDIYF-GALLAGLVMGKLPSDKFF 274
G+ Y APE + L + D++ G +L +++G+LP D F
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + GT
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGT 171
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 231
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 232 TEGARDLISRLLKHNPSQRPML 253
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGT 169
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 230 TEGARDLISRLLKHNPSQRPML 251
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + + GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 174
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
++Y+ PE ++ EK D++ G L ++GK P
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYIL------NDVSQGRRELDWLARHRIA 172
Q++ E+ +RH N+ L + D +Y++ +V + ++L R A
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFH--DATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 173 LGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVV 232
+ L H R+IHR E +I+ FG++ P + +
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLX 172
Query: 233 GTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNV 289
GT++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 290 MASENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 233 FVTEGARDLISRLLKHNPSQRPML 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAH---VTRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H R+IHR E +I+ FG++ P + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGT 172
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP--SDKFFQHTNEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P ++ + + +S V++
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 232
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 233 TEGARDLISRLLKHNPSQRPML 254
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 49/230 (21%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
++++G+G GEV+ N +++K + M A +EE
Sbjct: 18 VKRLGAGQFGEVWMGYY--NNSTKVAVKTLKPGTMSVQAFLEE----------------- 58
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR-- 170
N + ++H L L A VTR + +YI+ + LD+L
Sbjct: 59 -----------ANLMKTLQHDKLVRLYAVVTREEP--IYIITEYMAKGSLLDFLKSDEGG 105
Query: 171 ---------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPD 221
+ +A G+ Y+ + IHR + +I+ FG AR I D
Sbjct: 106 KVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIED 162
Query: 222 AHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLP 269
+ + +++ APE + T K D++ FG LL +V GK+P
Sbjct: 163 -NEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 27/182 (14%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR---- 170
K+ R SE + +GQ H N+ L VT+ ++ I + G LD R
Sbjct: 50 KQRRDFLSEASIMGQFDHPNVIHLEGVVTK-STPVMIITEFMENG--SLDSFLRQNDGQF 106
Query: 171 -------IALGLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
+ G+A G++YL M++ +HR + ++S FG +R + D
Sbjct: 107 TVIQLVGMLRGIAAGMKYLADMNY----VHRALAARNILVNSNLVCKVSDFGLSRFLEDD 162
Query: 223 HTHITTSNVVG---TVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHT 277
+ T ++ +G + + APE +Q T D++ ++ VM G+ P ++ T
Sbjct: 163 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMT 219
Query: 278 NE 279
N+
Sbjct: 220 NQ 221
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 119/295 (40%), Gaps = 31/295 (10%)
Query: 55 KIGSGGCGEVYKAE----LPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSE 110
++G G G+V+ AE LP Q+ ++++K + A + ++ LL M Q Q
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT--MLQHQHI 76
Query: 111 MLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR 170
+ + + + +RH +L+ L PD LL DV+ G L L
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDVAPGPLGLGQLLA-- 133
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
+A +A G+ YL H +HR + +I FG +R I +
Sbjct: 134 VASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 190
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGL-VMGKLPSDKFFQHTNEMSFVKWMRN 288
+ + ++ PE + T + D++ FG +L + GK P ++Q +N + + +
Sbjct: 191 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP---WYQLSNTEA-IDCITQ 246
Query: 289 VMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQI 343
E P+ C ++ +++ C +P +R + KDV L +
Sbjct: 247 GRELERPR----------ACPPEVYAIMR---GCWQREPQQRHSIKDVHARLQAL 288
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 27/182 (14%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR---- 170
K+ R SE + +GQ H N+ L VT+ ++ I + G LD R
Sbjct: 76 KQRRDFLSEASIMGQFDHPNVIHLEGVVTK-STPVMIITEFMENG--SLDSFLRQNDGQF 132
Query: 171 -------IALGLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
+ G+A G++YL M++ +HR + ++S FG +R + D
Sbjct: 133 TVIQLVGMLRGIAAGMKYLADMNY----VHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Query: 223 HTHITTSNVVG---TVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHT 277
+ T ++ +G + + APE +Q T D++ ++ VM G+ P ++ T
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMT 245
Query: 278 NE 279
N+
Sbjct: 246 NQ 247
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 119/295 (40%), Gaps = 31/295 (10%)
Query: 55 KIGSGGCGEVYKAE----LPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSE 110
++G G G+V+ AE LP Q+ ++++K + A + ++ LL M Q Q
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT--MLQHQHI 105
Query: 111 MLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR 170
+ + + + +RH +L+ L PD LL DV+ G L L
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDVAPGPLGLGQLLA-- 162
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
+A +A G+ YL H +HR + +I FG +R I +
Sbjct: 163 VASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 219
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGL-VMGKLPSDKFFQHTNEMSFVKWMRN 288
+ + ++ PE + T + D++ FG +L + GK P ++Q +N + + +
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP---WYQLSNTEA-IDCITQ 275
Query: 289 VMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQI 343
E P+ C ++ +++ C +P +R + KDV L +
Sbjct: 276 GRELERPR----------ACPPEVYAIMR---GCWQREPQQRHSIKDVHARLQAL 317
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 119/295 (40%), Gaps = 31/295 (10%)
Query: 55 KIGSGGCGEVYKAE----LPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSE 110
++G G G+V+ AE LP Q+ ++++K + A + ++ LL M Q Q
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT--MLQHQHI 82
Query: 111 MLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR 170
+ + + + +RH +L+ L PD LL DV+ G L L
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDVAPGPLGLGQLLA-- 139
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
+A +A G+ YL H +HR + +I FG +R I +
Sbjct: 140 VASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 196
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGL-VMGKLPSDKFFQHTNEMSFVKWMRN 288
+ + ++ PE + T + D++ FG +L + GK P ++Q +N + + +
Sbjct: 197 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP---WYQLSNTEA-IDCITQ 252
Query: 289 VMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQI 343
E P+ C ++ +++ C +P +R + KDV L +
Sbjct: 253 GRELERPR----------ACPPEVYAIMR---GCWQREPQQRHSIKDVHARLQAL 294
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 88/228 (38%), Gaps = 45/228 (19%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEM 111
L+ +GSG G V A + G+ G ++IKK+ P QSE+
Sbjct: 29 DLQPVGSGAYGAVCSA-VDGRTGAKVAIKKLYRP---------------------FQSEL 66
Query: 112 LLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHL-----LYIL-----NDVSQGRR 161
+ R E+ + +RH N+ LL V PD L Y++ D+ + +
Sbjct: 67 FAKRAYR----ELRLLKHMRHENVIGLL-DVFTPDETLDDFTDFYLVMPFMGTDLGKLMK 121
Query: 162 ELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPD 221
+ L RI + L+ L H IIHR E +I FG AR
Sbjct: 122 H-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR---- 176
Query: 222 AHTHITTSNVVGTVEYIAPEY-LQMLTLTEKCDIY-FGALLAGLVMGK 267
V T Y APE L + T+ DI+ G ++A ++ GK
Sbjct: 177 -QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 93/244 (38%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G I K A ++++D+ K + + SEM + K
Sbjct: 43 LGEGAFGQVVMAEAVG-----IDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMK 95
Query: 116 KMRQIQSEINTVGQIRHR-------------NLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+ + ++ I +G NL L P Y +N V + +
Sbjct: 96 MIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR +I+ FG AR I +
Sbjct: 156 FKDLVS--CTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
+ T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 276 HTNE 279
E
Sbjct: 271 LLKE 274
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 51 NIKKEIXINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 108
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 109 RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 166 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 226 TYL---NPWKKIDS 236
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 94/244 (38%), Gaps = 32/244 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G+V AE G I K A ++++D+ K + + SEM + K
Sbjct: 43 LGEGAFGQVVMAEAVG-----IDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMK 95
Query: 116 KMRQIQSEINTVGQIRHR-------------NLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+ + ++ I+ +G NL L P Y +N V + +
Sbjct: 96 MIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L LA G+EYL C IHR +I+ FG AR I +
Sbjct: 156 FKDLVS--CTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL------LAGLVMGKLPSDKFFQ 275
+ T+N V+++APE L T + D++ FG L L G +P ++ F+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 276 HTNE 279
E
Sbjct: 271 LLKE 274
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 107
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 225 TYL---NPWKKIDS 235
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 96 DSMLLNKKMRQIQSEMLLNKKMRQ-IQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILN 154
D ML + + ++ + + N Q +E + + Q+RH NL LL + LYI+
Sbjct: 27 DVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG-LYIVT 85
Query: 155 DVSQGRRELDWL-ARHRIALGLAC----------GLEYLHMHHCPRIIHRXXXXXXXXXX 203
+ +D+L +R R LG C +EYL ++ +HR
Sbjct: 86 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVS 142
Query: 204 XXIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAG 262
A++S FG + +A + T + V++ APE L+ + K D++ FG LL
Sbjct: 143 EDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREAAFSTKSDVWSFGILLWE 197
Query: 263 LV-MGKLP 269
+ G++P
Sbjct: 198 IYSFGRVP 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 107
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 108 RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 225 TYL---NPWKKIDS 235
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 51 NIKKEICINAMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 108
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 226 TYL---NPWKKIDS 236
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 89/227 (39%), Gaps = 42/227 (18%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G G G V K GR+++IKK + ++D M+ MR
Sbjct: 33 VGEGSYGMVMKCR-NKDTGRIVAIKKFLES--------DDDKMVKKIAMR---------- 73
Query: 116 KMRQIQSEINTVGQIRHRNLHPLLAHVTRPD-CHLLY------ILNDVSQGRRELDWLAR 168
EI + Q+RH NL LL + +L++ IL+D+ LD+
Sbjct: 74 -------EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVV 126
Query: 169 HRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITT 228
+ + G+ + H H+ IIHR ++ FGFAR + A
Sbjct: 127 QKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTL--AAPGEVY 181
Query: 229 SNVVGTVEYIAPEYL-QMLTLTEKCDIY-FGALLAGLVMGK--LPSD 271
+ V T Y APE L + + D++ G L+ + MG+ P D
Sbjct: 182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
L G+ YLH I HR +IS FG A + + + GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 235 VEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMAS 292
+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K + +
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYL-- 227
Query: 293 ENPKRAIDS 301
NP + IDS
Sbjct: 228 -NPWKKIDS 235
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 108
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 226 TYL---NPWKKIDS 236
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 108
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 226 TYL---NPWKKIDS 236
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 108
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 226 TYL---NPWKKIDS 236
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 107
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 225 TYL---NPWKKIDS 235
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 107
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 225 TYL---NPWKKIDS 235
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
L G+ YLH I HR +IS FG A + + + GT
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 235 VEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMAS 292
+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K + +
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-- 227
Query: 293 ENPKRAIDS 301
NP + IDS
Sbjct: 228 -NPWKKIDS 235
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
L G+ YLH I HR +IS FG A + + + GT
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 235 VEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMAS 292
+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K + +
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-- 227
Query: 293 ENPKRAIDS 301
NP + IDS
Sbjct: 228 -NPWKKIDS 235
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 49 NIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 106
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 107 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 163
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 223
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 224 TYL---NPWKKIDS 234
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 108
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 226 TYL---NPWKKIDS 236
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + ++ VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + ++ D++ G ++ LV G P
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 107
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 225 TYL---NPWKKIDS 235
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 96 DSMLLNKKMRQIQSEMLLNKKMRQ-IQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILN 154
D ML + + ++ + + N Q +E + + Q+RH NL LL + LYI+
Sbjct: 36 DVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG-LYIVT 94
Query: 155 DVSQGRRELDWL-ARHRIALGLAC----------GLEYLHMHHCPRIIHRXXXXXXXXXX 203
+ +D+L +R R LG C +EYL ++ +HR
Sbjct: 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVS 151
Query: 204 XXIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAG 262
A++S FG + +A + T + V++ APE L+ + K D++ FG LL
Sbjct: 152 EDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWE 206
Query: 263 LV-MGKLP 269
+ G++P
Sbjct: 207 IYSFGRVP 214
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 108
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 226 TYL---NPWKKIDS 236
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
L G+ YLH I HR +IS FG A + + + GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 235 VEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMAS 292
+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K + +
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-- 227
Query: 293 ENPKRAIDS 301
NP + IDS
Sbjct: 228 -NPWKKIDS 235
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 123 EINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG---------RRELDWLARHRIAL 173
E+ + Q+ H N+ L D Y++ +V G R+ + RI
Sbjct: 76 EVQLLKQLDHPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 133
Query: 174 GLACGLEYLHMHHCPRIIHRX---XXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS- 229
+ G+ Y+H + +I+HR RI FG + TH S
Sbjct: 134 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASK 183
Query: 230 ---NVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVMGKLPSDKFFQHTNEMSFVK 284
+ +GT YIAPE L T EKCD++ ++ +++ P F NE +K
Sbjct: 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP---FNGANEYDILK 237
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 16/176 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVS---QGRRELDWLAR---HRIA 172
Q++ E+ +RH N+ L + D +Y++ + + REL L+R R A
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSRFDEQRTA 115
Query: 173 LGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVV 232
+ L H R+IHR E +I+ FG++ P + + +
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLC 171
Query: 233 GTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
GT++Y+ PE ++ EK D++ G L ++G P F HT + ++ + R
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP---FEAHTYQETYRRISR 224
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
L G+ YLH I HR +IS FG A + + + GT
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 235 VEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMAS 292
+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K + +
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-- 227
Query: 293 ENPKRAIDS 301
NP + IDS
Sbjct: 228 -NPWKKIDS 235
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 23/162 (14%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+YLH + IHR + +++ FG A + D T I + VGT +
Sbjct: 132 GLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTPFW 186
Query: 238 IAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPK 296
+APE +Q K DI+ G L G+ P+ H + F ++ NP
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM--HPMRVLF------LIPKNNP- 237
Query: 297 RAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR 338
LVG+ + + C +DP+ RP +K++ +
Sbjct: 238 ----PTLVGDFTKS----FKEFIDACLNKDPSFRPTAKELLK 271
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 107
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 225 TYL---NPWKKIDS 235
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 107
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 225 TYL---NPWKKIDS 235
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHV---TRPDCHLLYI-LNDVSQGRRELDWLARHRIALG 174
Q++ E+ +RH N+ L + TR L Y L V + ++L R A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ L H ++IHR E +I+ FG++ P + + + GT
Sbjct: 114 ITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGT 169
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSD-KFFQHT-NEMSFVKWMRNVMA 291
++Y+ PE ++ EK D++ G L ++GK P + +Q T +S V++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFV 229
Query: 292 SENPKRAIDSKLVGNGCEEQML 313
+E + I L N + ML
Sbjct: 230 TEGARDLISRLLKHNPSQRPML 251
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 18/158 (11%)
Query: 117 MRQIQSEINTVGQIRHRNLHPLLAHVTRP-DCHLLYILNDVSQGR----RELDWLARHRI 171
+ Q+ EI + ++ H N+ L+ + P + HL + V+QG L L+ +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 172 AL---GLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITT 228
L G+EYLH +IIHR +I+ FG + + +
Sbjct: 140 RFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL-- 194
Query: 229 SNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVMG 266
SN VGT ++APE +L+E I+ G L MG
Sbjct: 195 SNTVGTPAFMAPE-----SLSETRKIFSGKALDVWAMG 227
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 123 EINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG---------RRELDWLARHRIAL 173
E+ + Q+ H N+ L D Y++ +V G R+ + RI
Sbjct: 82 EVQLLKQLDHPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 139
Query: 174 GLACGLEYLHMHHCPRIIHRX---XXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS- 229
+ G+ Y+H + +I+HR RI FG + TH S
Sbjct: 140 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASK 189
Query: 230 ---NVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVMGKLPSDKFFQHTNEMSFVK 284
+ +GT YIAPE L T EKCD++ ++ +++ P F NE +K
Sbjct: 190 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP---FNGANEYDILK 243
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 94/245 (38%), Gaps = 49/245 (20%)
Query: 38 AKDLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDS 97
A D A+ + + ++K+G+G GEV+ N +++K + M A +EE
Sbjct: 2 AMDPAWEIPRESIKLVKKLGAGQFGEVWMGYY--NNSTKVAVKTLKPGTMSVQAFLEE-- 57
Query: 98 MLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVS 157
N + ++H L L A VT+ + +YI+ +
Sbjct: 58 --------------------------ANLMKTLQHDKLVRLYAVVTKEEP--IYIITEFM 89
Query: 158 QGRRELDWLARHR-----------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXI 206
LD+L + +A G+ Y+ + IHR +
Sbjct: 90 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESL 146
Query: 207 EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM 265
+I+ FG AR I D + + +++ APE + T K +++ FG LL +V
Sbjct: 147 MCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
Query: 266 -GKLP 269
GK+P
Sbjct: 206 YGKIP 210
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 19/194 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA---------RH 169
I+ EI + H N+ H R + ++ Y+ + G D +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 108
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
R L G+ YLH I HR +IS FG A + +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 230 NVVGTVEYIAPEYLQMLTL-TEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
+ GT+ Y+APE L+ E D++ G +L ++ G+LP D+ E S K +
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 288 NVMASENPKRAIDS 301
+ NP + IDS
Sbjct: 226 TYL---NPWKKIDS 236
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 123 EINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG---------RRELDWLARHRIAL 173
E+ + Q+ H N+ L D Y++ +V G R+ + RI
Sbjct: 99 EVQLLKQLDHPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 156
Query: 174 GLACGLEYLHMHHCPRIIHRX---XXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS- 229
+ G+ Y+H + +I+HR RI FG + TH S
Sbjct: 157 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASK 206
Query: 230 ---NVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVMGKLPSDKFFQHTNEMSFVK 284
+ +GT YIAPE L T EKCD++ ++ +++ P F NE +K
Sbjct: 207 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP---FNGANEYDILK 260
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 123 EINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG---------RRELDWLARHRIAL 173
E+ + Q+ H N+ L D Y++ +V G R+ + RI
Sbjct: 100 EVQLLKQLDHPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 157
Query: 174 GLACGLEYLHMHHCPRIIHRX---XXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS- 229
+ G+ Y+H + +I+HR RI FG + TH S
Sbjct: 158 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASK 207
Query: 230 ---NVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVMGKLPSDKFFQHTNEMSFVK 284
+ +GT YIAPE L T EKCD++ ++ +++ P F NE +K
Sbjct: 208 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP---FNGANEYDILK 261
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 96 DSMLLNKKMRQIQSEMLLNKKMRQ-IQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILN 154
D ML + + ++ + + N Q +E + + Q+RH NL LL + LYI+
Sbjct: 21 DVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG-LYIVT 79
Query: 155 DVSQGRRELDWL-ARHRIALGLAC----------GLEYLHMHHCPRIIHRXXXXXXXXXX 203
+ +D+L +R R LG C +EYL ++ +HR
Sbjct: 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVS 136
Query: 204 XXIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAG 262
A++S FG + +A + T + V++ APE L+ + K D++ FG LL
Sbjct: 137 EDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWE 191
Query: 263 LV-MGKLP 269
+ G++P
Sbjct: 192 IYSFGRVP 199
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 160 RRELDWLARHRIALG----------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEAR 209
RR L L + R AL + G +YLH + R+IHR +E +
Sbjct: 101 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVK 157
Query: 210 ISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKL 268
I FG A + + + GT YIAPE L + + D++ G ++ L++GK
Sbjct: 158 IGDFGLATKV--EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 269 P------SDKFFQ-HTNEMSFVKWMRNVMAS 292
P + + + NE S K + V AS
Sbjct: 216 PFETSCLKETYLRIKKNEYSIPKHINPVAAS 246
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 160 RRELDWLARHRIALG----------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEAR 209
RR L L + R AL + G +YLH + R+IHR +E +
Sbjct: 105 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVK 161
Query: 210 ISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKL 268
I FG A + + + GT YIAPE L + + D++ G ++ L++GK
Sbjct: 162 IGDFGLATKV--EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 219
Query: 269 P------SDKFFQ-HTNEMSFVKWMRNVMAS 292
P + + + NE S K + V AS
Sbjct: 220 PFETSCLKETYLRIKKNEYSIPKHINPVAAS 250
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 160 RRELDWLARHRIALG----------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEAR 209
RR L L + R AL + G +YLH + R+IHR +E +
Sbjct: 101 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVK 157
Query: 210 ISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKL 268
I FG A + + + GT YIAPE L + + D++ G ++ L++GK
Sbjct: 158 IGDFGLATKV--EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 269 P------SDKFFQ-HTNEMSFVKWMRNVMAS 292
P + + + NE S K + V AS
Sbjct: 216 PFETSCLKETYLRIKKNEYSIPKHINPVAAS 246
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 96 DSMLLNKKMRQIQSEMLLNKKMRQ-IQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILN 154
D ML + + ++ + + N Q +E + + Q+RH NL LL + LYI+
Sbjct: 208 DVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG-LYIVT 266
Query: 155 DVSQGRRELDWL-ARHRIALGLAC----------GLEYLHMHHCPRIIHRXXXXXXXXXX 203
+ +D+L +R R LG C +EYL ++ +HR
Sbjct: 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVS 323
Query: 204 XXIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAG 262
A++S FG + +A + T + V++ APE L+ + K D++ FG LL
Sbjct: 324 EDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWE 378
Query: 263 LV-MGKLP 269
+ G++P
Sbjct: 379 IYSFGRVP 386
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 17/126 (13%)
Query: 164 DWLARHRIALG--------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGF 215
D+L RH I L + G+ YLH H IHR +I FG
Sbjct: 107 DYLPRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGL 163
Query: 216 ARAIPDAHTHI-TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM----GKLP 269
A+A+P+ H + + V + APE L+ D++ FG L L+ + P
Sbjct: 164 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 223
Query: 270 SDKFFQ 275
KF +
Sbjct: 224 PTKFLE 229
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 16/176 (9%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVS---QGRRELDWLAR---HRIA 172
Q++ E+ +RH N+ L + D +Y++ + + REL L+R R A
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSRFDEQRTA 115
Query: 173 LGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVV 232
+ L H R+IHR E +I+ FG++ P + +
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLC 171
Query: 233 GTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMR 287
GT++Y+ PE ++ EK D++ G L ++G P F HT + ++ + R
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP---FEAHTYQETYRRISR 224
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR----------- 170
+E N + ++H L L A VT+ +YI+ + LD+L
Sbjct: 59 AEANVMKTLQHDKLVKLHAVVTK---EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 115
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
+ +A G+ ++ + IHR + +I+ FG AR I D + +
Sbjct: 116 FSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIED-NEYTAREG 171
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLP 269
+++ APE + + T K D++ FG LL +V G++P
Sbjct: 172 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 76/196 (38%), Gaps = 36/196 (18%)
Query: 105 RQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG----- 159
RQ++ + +R++Q + Q+ H N+ L D Y++ +V G
Sbjct: 62 RQVKQKTDKESLLREVQ----LLKQLDHPNIXKLYEFF--EDKGYFYLVGEVYTGGELFD 115
Query: 160 ----RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRX---XXXXXXXXXXXIEARISG 212
R+ + RI + G+ Y H + +I+HR RI
Sbjct: 116 EIISRKRFSEVDAARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIID 172
Query: 213 FGFARAIPDAHTHITTS----NVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVMGKL 268
FG + TH S + +GT YIAPE L T EKCD++ ++ +++
Sbjct: 173 FGLS-------THFEASKKXKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGC 224
Query: 269 PSDKFFQHTNEMSFVK 284
P F NE +K
Sbjct: 225 PP---FNGANEYDILK 237
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 25/194 (12%)
Query: 92 LIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLY 151
L+EE S L + ++ I + M QI++EI + + H N+ + D H +Y
Sbjct: 40 LVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFE--VFEDYHNMY 96
Query: 152 ILNDVSQGRRELDWLARHRIALGLAC--------------GLEYLHMHHCPRIIHRXXXX 197
I+ + +G L+ + + A G A L Y H H +
Sbjct: 97 IVMETCEGGELLERIVSAQ-ARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENI 155
Query: 198 XXXXXXXXIEARISGFGFARAI-PDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY- 255
+I FG A D H+ +N GT Y+APE + +T KCDI+
Sbjct: 156 LFQDTSPHSPIKIIDFGLAELFKSDEHS----TNAAGTALYMAPEVFKR-DVTFKCDIWS 210
Query: 256 FGALLAGLVMGKLP 269
G ++ L+ G LP
Sbjct: 211 AGVVMYFLLTGCLP 224
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 17/126 (13%)
Query: 164 DWLARHRIALG--------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGF 215
D+L RH I L + G+ YLH H IHR +I FG
Sbjct: 107 DYLPRHSIGLAQLLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGL 163
Query: 216 ARAIPDAHTHI-TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM----GKLP 269
A+A+P+ H + + V + APE L+ D++ FG L L+ + P
Sbjct: 164 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 223
Query: 270 SDKFFQ 275
KF +
Sbjct: 224 PTKFLE 229
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 15/119 (12%)
Query: 165 WLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHT 224
W R A +A G+ YLH + IIHR ++ FG AR + D T
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163
Query: 225 HI------------TTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVMGKLPSD 271
VVG ++APE + + EK D++ ++ ++G++ +D
Sbjct: 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 123/320 (38%), Gaps = 40/320 (12%)
Query: 33 PLIKKAKDLAFLE-KKGGLASLEKIGSGGCGEVYKAEL----PGQNGRMISIK----KIV 83
PLI + K E + +E++G G+VYK L PG+ + ++IK K
Sbjct: 10 PLINQHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE 69
Query: 84 GPPMDAAALIEE--DSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAH 141
GP L EE +L +++ LL + Q H +LH L
Sbjct: 70 GP------LREEFRHEAMLRARLQHPNVVCLLGVVTKD-QPLSMIFSYCSHGDLHEFL-- 120
Query: 142 VTRPDCHLLYILNDVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXX 201
V R + +D + L+ + +A G+EYL HH ++H+
Sbjct: 121 VMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVL 177
Query: 202 XXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
+ +IS G R + A + N + + ++APE + + DI+ +G +L
Sbjct: 178 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVL 237
Query: 261 AGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIAC 320
+ L + ++N+ V+ +RN P + C + L I C
Sbjct: 238 WEVFSYGL--QPYCGYSNQ-DVVEMIRNRQVLPCP----------DDC-PAWVYALMIEC 283
Query: 321 FCTLEDPNERPNSKDVRRML 340
+ E P+ RP KD+ L
Sbjct: 284 WN--EFPSRRPRFKDIHSRL 301
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + ++ VGT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 24/218 (11%)
Query: 56 IGSGGCGEVYKAELPG-QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN 114
+G G G+V AE G + + K+ A +++ D+ K + + SEM +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKV------AVKMLKSDAT--EKDLSDLISEMEMM 72
Query: 115 KKMRQIQSEINTVGQIRHRN-LHPLLAHVTRPDCH----------LLYILNDVSQGRREL 163
K + + ++ IN +G L+ ++ + ++ + L Y N +L
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 164 DWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAH 223
A +A G+EYL C IHR +I+ FG AR I
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 224 THITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
+ T+N V+++APE L T + D++ FG LL
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 227
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 160 RRELDWLARHRIALG----------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEAR 209
RR L L + R AL + G +YLH + R+IHR +E +
Sbjct: 125 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVK 181
Query: 210 ISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKL 268
I FG A + + + GT YIAPE L + + D++ G ++ L++GK
Sbjct: 182 IGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 239
Query: 269 P------SDKFFQ-HTNEMSFVKWMRNVMAS 292
P + + + NE S K + V AS
Sbjct: 240 PFETSCLKETYLRIKKNEYSIPKHINPVAAS 270
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 24/218 (11%)
Query: 56 IGSGGCGEVYKAELPG-QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN 114
+G G G+V AE G + + K+ A +++ D+ K + + SEM +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKV------AVKMLKSDAT--EKDLSDLISEMEMM 87
Query: 115 KKMRQIQSEINTVGQIRHRN-LHPLLAHVTRPDCH----------LLYILNDVSQGRREL 163
K + + ++ IN +G L+ ++ + ++ + L Y N +L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 164 DWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAH 223
A +A G+EYL C IHR +I+ FG AR I
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 224 THITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
+ T+N V+++APE L T + D++ FG LL
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + ++ VGT
Sbjct: 138 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A +A G+EYL C IHR +I+ FG AR I + T+N
Sbjct: 149 AYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
V+++APE L T + D++ FG LL
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLL 235
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNE 279
+Y++PE L + + D++ G ++ LV G P F+ NE
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP----FRAGNE 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A +A G+EYL C IHR +I+ FG AR I + T+N
Sbjct: 156 AYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
V+++APE L T + D++ FG LL
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR----------- 170
+E N + ++H L L A VT+ +YI+ + LD+L
Sbjct: 232 AEANVMKTLQHDKLVKLHAVVTK---EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 288
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
+ +A G+ ++ + IHR + +I+ FG AR I D + +
Sbjct: 289 FSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIED-NEYTAREG 344
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLP 269
+++ APE + + T K D++ FG LL +V G++P
Sbjct: 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A +A G+EYL C IHR +I+ FG AR I + T+N
Sbjct: 145 AYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
V+++APE L T + D++ FG LL
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLL 231
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 160 RRELDWLARHRIALG----------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEAR 209
RR L L + R AL + G +YLH + R+IHR +E +
Sbjct: 123 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVK 179
Query: 210 ISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKL 268
I FG A + + + GT YIAPE L + + D++ G ++ L++GK
Sbjct: 180 IGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 237
Query: 269 P------SDKFFQ-HTNEMSFVKWMRNVMAS 292
P + + + NE S K + V AS
Sbjct: 238 PFETSCLKETYLRIKKNEYSIPKHINPVAAS 268
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A +A G+EYL C IHR +I+ FG AR I + T+N
Sbjct: 148 AYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
V+++APE L T + D++ FG LL
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLL 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A +A G+EYL C IHR +I+ FG AR I + T+N
Sbjct: 156 AYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
V+++APE L T + D++ FG LL
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHV-TRPDCHLLYILNDVSQGRRELDWLAR---HRIALG 174
Q++ EI +RH N+ + + R +L+ + +EL R R A
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 120
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ + LH H ++IHR E +I+ FG++ P + + GT
Sbjct: 121 MEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGT 176
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSD 271
++Y+ PE ++ T EK D++ G L ++G P D
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
++++ + GL YL H +I+HR E ++ FG + + D+ +
Sbjct: 118 KVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 171
Query: 230 NVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ VGT Y+APE LQ + + DI+ G L L +G+ P
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 24/218 (11%)
Query: 56 IGSGGCGEVYKAELPG-QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN 114
+G G G+V AE G + + K+ A +++ D+ K + + SEM +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKV------AVKMLKSDAT--EKDLSDLISEMEMM 128
Query: 115 KKMRQIQSEINTVGQIRHRN-LHPLLAHVTRPDCH----------LLYILNDVSQGRREL 163
K + + ++ IN +G L+ ++ + ++ + L Y N +L
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 164 DWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAH 223
A +A G+EYL C IHR +I+ FG AR I
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 224 THITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
+ T+N V+++APE L T + D++ FG LL
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 283
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+YLH + IHR E +++ FG A + D T I + VGT +
Sbjct: 116 GLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFW 170
Query: 238 IAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+APE ++ K DI+ G L G+ P
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 17/126 (13%)
Query: 164 DWLARHRIALG--------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGF 215
D+L RH I L + G+ YLH H IHR +I FG
Sbjct: 124 DYLPRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGL 180
Query: 216 ARAIPDAH-THITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM----GKLP 269
A+A+P+ H + + V + APE L+ D++ FG L L+ + P
Sbjct: 181 AKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 240
Query: 270 SDKFFQ 275
KF +
Sbjct: 241 PTKFLE 246
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNE 279
+Y++PE L + + D++ G ++ LV G P F+ NE
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNE 239
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+YLH + IHR E +++ FG A + D T I + VGT +
Sbjct: 131 GLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFW 185
Query: 238 IAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+APE ++ K DI+ G L G+ P
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHV-TRPDCHLLYILNDVSQGRRELDWLAR---HRIALG 174
Q++ EI +RH N+ + + R +L+ + +EL R R A
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 119
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ + LH H ++IHR E +I+ FG++ P + + GT
Sbjct: 120 MEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGT 175
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSD 271
++Y+ PE ++ T EK D++ G L ++G P D
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 116/299 (38%), Gaps = 39/299 (13%)
Query: 53 LEKIGSGGCGEVYKAEL----PGQNGRMISIK----KIVGPPMDAAALIEE--DSMLLNK 102
+E++G G+VYK L PG+ + ++IK K GP L EE +L
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP------LREEFRHEAMLRA 67
Query: 103 KMRQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE 162
+++ LL + Q H +LH L V R + +D +
Sbjct: 68 RLQHPNVVCLLGVVTKD-QPLSMIFSYCSHGDLHEFL--VMRSPHSDVGSTDDDRTVKSA 124
Query: 163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
L+ + +A G+EYL HH ++H+ + +IS G R + A
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMS 281
+ N + + ++APE + + DI+ +G +L + L + ++N+
Sbjct: 182 DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL--QPYCGYSNQ-D 238
Query: 282 FVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRML 340
V+ +RN P + C + L I C+ E P+ RP KD+ L
Sbjct: 239 VVEMIRNRQVLPCP----------DDC-PAWVYALMIECWN--EFPSRRPRFKDIHSRL 284
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 123 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNE 279
+Y++PE L + + D++ G ++ LV G P F+ NE
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNE 242
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHV-TRPDCHLLYILNDVSQGRRELDWLAR---HRIALG 174
Q++ EI +RH N+ + + R +L+ + +EL R R A
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 119
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ + LH H ++IHR E +I+ FG++ P + + GT
Sbjct: 120 MEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGT 175
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSD 271
++Y+ PE ++ T EK D++ G L ++G P D
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 94/244 (38%), Gaps = 43/244 (17%)
Query: 55 KIGSGGCGEVYK-AELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLL 113
K+GSG GEV E G + + +IK I D ++ NK + + E
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEK--AIKVIKKSQFDKGRYSDD-----NKNIEKFHEE--- 92
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG---------RRELD 164
I +EI+ + + H N+ L D Y++ + +G R + D
Sbjct: 93 ------IYNEISLLKSLDHPNIIKLFD--VFEDKKYFYLVTEFYEGGELFEQIINRHKFD 144
Query: 165 WLARHRIALGLACGLEYLHMHHCPRIIHRX---XXXXXXXXXXXIEARISGFGFARAIPD 221
I + G+ YLH H+ I+HR + +I FG +
Sbjct: 145 ECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK 201
Query: 222 AHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYF-GALLAGLVMGKLPSDKFFQHTNEM 280
+ + +GT YIAPE L+ EKCD++ G ++ L+ G P F N+
Sbjct: 202 DYK---LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP----FGGQNDQ 253
Query: 281 SFVK 284
+K
Sbjct: 254 DIIK 257
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A +A G+EYL C IHR +I+ FG AR I T+N
Sbjct: 156 AYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
V+++APE L T + D++ FG LL
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
G++YLH + R+IHR ++ +I FG A I ++ GT Y
Sbjct: 138 GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNY 192
Query: 238 IAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
IAPE L + + DI+ G +L L++GK P
Sbjct: 193 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 54 EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLL 113
+ +G+G G+V +A G G+ ++ K+ + + A +E L+ SE+ +
Sbjct: 44 KTLGAGAFGKVVEATAFGL-GKEDAVLKVAVKMLKSTAHADEKEALM--------SELKI 94
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCH--LLYILNDVSQGR------RELDW 165
+ Q ++ +N +G H P+L +T C+ LL L ++ R L+
Sbjct: 95 MSHLGQHENIVNLLGACTHGG--PVLV-ITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 151
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
+ +A G+ +L +C IHR A+I FG AR I + +
Sbjct: 152 RDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 208
Query: 226 ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
I N V+++APE + T + D++ +G LL
Sbjct: 209 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 244
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ LEYLH IIHR + +I+ FG A+ + + VGT
Sbjct: 138 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+Y++PE L + + D++ G ++ LV G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G+G G+V +A G G+ ++ K+ + + A +E L+ SE+ +
Sbjct: 54 LGAGAFGKVVEATAFGL-GKEDAVLKVAVKMLKSTAHADEKEALM--------SELKIMS 104
Query: 116 KMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCH--LLYILNDVSQGR------RELDWLA 167
+ Q ++ +N +G H P+L +T C+ LL L ++ R L+
Sbjct: 105 HLGQHENIVNLLGACTHGG--PVLV-ITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 161
Query: 168 RHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT 227
+ +A G+ +L +C IHR A+I FG AR I + +I
Sbjct: 162 LLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 218
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
N V+++APE + T + D++ +G LL
Sbjct: 219 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 252
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 206 IEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV 264
+E +I FGFAR P + + T T+ Y APE L E CD++ G +L ++
Sbjct: 146 LEIKIIDFGFARLKPPDNQPLKTP--CFTLHYAAPELLNQNGYDESCDLWSLGVILYTML 203
Query: 265 MGKLP 269
G++P
Sbjct: 204 SGQVP 208
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 12/93 (12%)
Query: 164 DWLARHRIALGLACGLEYLHM------HHCPRIIHRXXXXXXXXXXXXIEARISGFGFA- 216
DW++ R+A + GL YLH H+ P I HR IS FG +
Sbjct: 109 DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168
Query: 217 -----RAIPDAHTHITTSNVVGTVEYIAPEYLQ 244
R + + VGT+ Y+APE L+
Sbjct: 169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLE 201
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I GFG AR HT + V T Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGYVATRWY 188
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+YLH + IHR E +++ FG A + D T I + VGT +
Sbjct: 136 GLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFW 190
Query: 238 IAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+APE ++ K DI+ G L G+ P
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 18/170 (10%)
Query: 122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILND----------VSQGRRELDWLARH-- 169
SE+N + +++H N+ + LYI+ + +++G +E +L
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 170 -RIALGLACGLEYLHMHH--CPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHI 226
R+ L L+ H ++HR ++ FG AR + H
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDED 171
Query: 227 TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ 275
VGT Y++PE + ++ EK DI+ G LL L P F Q
Sbjct: 172 FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 160 RRELDWLARHRIALG----------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEAR 209
RR L L + R AL + G +YLH + R+IHR +E +
Sbjct: 99 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVK 155
Query: 210 ISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKL 268
I FG A + + + GT YIAPE L + + D++ G ++ L++GK
Sbjct: 156 IGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 213
Query: 269 P------SDKFFQ-HTNEMSFVKWMRNVMAS 292
P + + + NE S K + V AS
Sbjct: 214 PFETSCLKETYLRIKKNEYSIPKHINPVAAS 244
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
G++YLH + R+IHR ++ +I FG A I ++ GT Y
Sbjct: 154 GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNY 208
Query: 238 IAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
IAPE L + + DI+ G +L L++GK P
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+YLH + IHR E +++ FG A + D T I + VGT +
Sbjct: 116 GLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFW 170
Query: 238 IAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+APE ++ K DI+ G L G+ P
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
++++ + GL YL H +I+HR E ++ FG + + D+ +
Sbjct: 135 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 188
Query: 230 NVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ VGT Y++PE LQ + + DI+ G L + +G+ P
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
++++ + GL YL H +I+HR E ++ FG + + D+ +
Sbjct: 170 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 223
Query: 230 NVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ VGT Y++PE LQ + + DI+ G L + +G+ P
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 65/175 (37%), Gaps = 18/175 (10%)
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRP---DCHLLYILNDVSQGRRE-------L 163
+K+ Q + E+ ++ ++H N+ + R D L I +G +
Sbjct: 59 DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVV 118
Query: 164 DWLARHRIALGLACGLEYLHMH-------HCPRIIHRXXXXXXXXXXXXIEARISGFGFA 216
W IA +A GL YLH H P I HR + A I+ FG A
Sbjct: 119 SWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
Query: 217 RAIPDAHTHITTSNVVGTVEYIAPEYLQ-MLTLTEKCDIYFGALLAGLVMGKLPS 270
+ T VGT Y+APE L+ + + GLV+ +L S
Sbjct: 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIP-DAHTHITTSNVVGTVE 236
G++YLH + R+IHR ++ +I FG A I D T + GT
Sbjct: 154 GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTPN 207
Query: 237 YIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
YIAPE L + + DI+ G +L L++GK P
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
++++ + GL YL H +I+HR E ++ FG + + D+ +
Sbjct: 127 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 180
Query: 230 NVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ VGT Y++PE LQ + + DI+ G L + +G+ P
Sbjct: 181 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
++++ + GL YL H +I+HR E ++ FG + + D+ +
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 230 NVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ VGT Y++PE LQ + + DI+ G L + +G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 30/219 (13%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LEK+G G G VYKA + + G++++IK+ V D +I+E S+ M+Q S +
Sbjct: 34 LEKLGEGSYGSVYKA-IHKETGQIVAIKQ-VPVESDLQEIIKEISI-----MQQCDSPHV 86
Query: 113 LNKKMRQIQSEINTVGQ-IRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRI 171
+ G ++ +L ++ + + L + + E+ + + +
Sbjct: 87 -----------VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTL 135
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
GLEYLH R IHR A+++ FG A + D + V
Sbjct: 136 K-----GLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK--RNXV 185
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+GT ++APE +Q + DI+ G + GK P
Sbjct: 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 18/170 (10%)
Query: 122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILND----------VSQGRRELDWLARH-- 169
SE+N + +++H N+ + LYI+ + +++G +E +L
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 170 -RIALGLACGLEYLHMHH--CPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHI 226
R+ L L+ H ++HR ++ FG AR + H
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTS 171
Query: 227 TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ 275
VGT Y++PE + ++ EK DI+ G LL L P F Q
Sbjct: 172 FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 24/218 (11%)
Query: 54 EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLL 113
+ +G+G G+V +A G G+ ++ K+ + + A +E L+ SE+ +
Sbjct: 52 KTLGAGAFGKVVEATAFGL-GKEDAVLKVAVKMLKSTAHADEKEALM--------SELKI 102
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL 173
+ Q ++ +N +G H P+L V C +LN + + R L+ IA
Sbjct: 103 MSHLGQHENIVNLLGACTHGG--PVL--VITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 174 GLACGLEYLHMHH----------CPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAH 223
A + LH IHR A+I FG AR I +
Sbjct: 159 STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 224 THITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
+I N V+++APE + T + D++ +G LL
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 256
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
++++ + GL YL H +I+HR E ++ FG + + D+ +
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 230 NVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ VGT Y++PE LQ + + DI+ G L + +G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
++++ + GL YL H +I+HR E ++ FG + + D+ +
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 230 NVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ VGT Y++PE LQ + + DI+ G L + +G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
++++ + GL YL H +I+HR E ++ FG + + D+ +
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 230 NVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ VGT Y++PE LQ + + DI+ G L + +G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 89/220 (40%), Gaps = 30/220 (13%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+G+G G+V +A G G+ ++ K+ + + A +E L+ SE+ +
Sbjct: 54 LGAGAFGKVVEATAFGL-GKEDAVLKVAVKMLKSTAHADEKEALM--------SELKIMS 104
Query: 116 KMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCH--------------LLYILNDVSQGRR 161
+ Q ++ +N +G H P+L +T C+ L Y N
Sbjct: 105 HLGQHENIVNLLGACTHGG--PVLV-ITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE 161
Query: 162 ELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPD 221
+L + +A G+ +L +C IHR A+I FG AR I +
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 222 AHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
+I N V+++APE + T + D++ +G LL
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 258
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
++++ + GL YL H +I+HR E ++ FG + + D+ +
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 230 NVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ VGT Y++PE LQ + + DI+ G L + +G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+YLH R IHR + +++ FG A + D T I + VGT +
Sbjct: 128 GLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFW 182
Query: 238 IAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPS 270
+APE ++ K DI+ G L G+ P+
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPN 216
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 22 NLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 109 SEMLLNKKMRQIQSEINTVGQIRH---RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW 165
+ + R ++ E N V + H +L+ ++ D H+ +++ + +G
Sbjct: 81 GLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRG------ 133
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L+Y+H IIHR E +I FG AR HT
Sbjct: 134 -------------LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD 172
Query: 226 ITTSNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
+ V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 58/152 (38%), Gaps = 20/152 (13%)
Query: 112 LLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRP---DCHLLYI--------LNDVSQGR 160
L +K+ Q + EI + ++H NL +A R + L I L D +G
Sbjct: 48 LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN 107
Query: 161 RELDWLARHRIALGLACGLEYLHMH--------HCPRIIHRXXXXXXXXXXXXIEARISG 212
+ W +A ++ GL YLH H P I HR + A ++
Sbjct: 108 I-ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLAD 166
Query: 213 FGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ 244
FG A T VGT Y+APE L+
Sbjct: 167 FGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLE 198
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 17/124 (13%)
Query: 164 DWLARHRIALG--------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGF 215
D+L RH + L + G+ YLH H IHR +I FG
Sbjct: 101 DYLPRHCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGL 157
Query: 216 ARAIPDAHTHI-TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM----GKLP 269
A+A+P+ H + + V + APE L+ D++ FG L L+ + P
Sbjct: 158 AKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSP 217
Query: 270 SDKF 273
KF
Sbjct: 218 HTKF 221
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 54 EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLL 113
+ +G+G G+V +A G G+ ++ K+ + + A +E L+ SE+ +
Sbjct: 52 KTLGAGAFGKVVEATAFGL-GKEDAVLKVAVKMLKSTAHADEKEALM--------SELKI 102
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL 173
+ Q ++ +N +G H P+L V C +LN + + R L+ IA
Sbjct: 103 MSHLGQHENIVNLLGACTHGG--PVL--VITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 174 G-------------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIP 220
+A G+ +L +C IHR A+I FG AR I
Sbjct: 159 STLSTRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 221 DAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
+ +I N V+++APE + T + D++ +G LL
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 256
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 37/221 (16%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LEKIG G G VYKA+ G ++KKI L +ED + + +R+I
Sbjct: 7 LEKIGEGTYGVVYKAQ--NNYGETFALKKI--------RLEKEDEGIPSTTIREIS---- 52
Query: 113 LNKKMRQIQSEINTVGQIRH--RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR 170
+ K+++ S I + + H + L + H+ + LL DV +G L+ +
Sbjct: 53 ILKELK--HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLL----DVCEGG--LESVTAKS 104
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA--IP-DAHTHIT 227
L L G+ Y H R++HR E +I+ FG ARA IP +TH
Sbjct: 105 FLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-- 159
Query: 228 TSNVVGTVEYIAPEYLQ-MLTLTEKCDIY-FGALLAGLVMG 266
V T+ Y AP+ L + DI+ G + A +V G
Sbjct: 160 ---EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 17/124 (13%)
Query: 164 DWLARHRIALG--------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGF 215
D+L RH + L + G+ YLH H IHR +I FG
Sbjct: 102 DYLPRHCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGL 158
Query: 216 ARAIPDAHTHI-TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM----GKLP 269
A+A+P+ H + + V + APE L+ D++ FG L L+ + P
Sbjct: 159 AKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSP 218
Query: 270 SDKF 273
KF
Sbjct: 219 HTKF 222
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 37/221 (16%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LEKIG G G VYKA+ G ++KKI L +ED + + +R+I
Sbjct: 7 LEKIGEGTYGVVYKAQ--NNYGETFALKKI--------RLEKEDEGIPSTTIREIS---- 52
Query: 113 LNKKMRQIQSEINTVGQIRH--RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR 170
+ K+++ S I + + H + L + H+ + LL DV +G L+ +
Sbjct: 53 ILKELK--HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLL----DVCEGG--LESVTAKS 104
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA--IP-DAHTHIT 227
L L G+ Y H R++HR E +I+ FG ARA IP +TH
Sbjct: 105 FLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-- 159
Query: 228 TSNVVGTVEYIAPEYLQ-MLTLTEKCDIY-FGALLAGLVMG 266
V T+ Y AP+ L + DI+ G + A +V G
Sbjct: 160 ---EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 89/240 (37%), Gaps = 53/240 (22%)
Query: 56 IGSGGCGEVYKAEL--PGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLL 113
IGSG GEV L PGQ ++IK + A E
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKAL------KAGYTE------------------- 91
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR--- 170
++ R SE + +GQ H N+ L VTR L I+ + + +L H
Sbjct: 92 -RQRRDFLSEASIMGQFDHPNIIRLEGVVTR--GRLAMIVTEYMENGSLDTFLRTHDGQF 148
Query: 171 -------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI---P 220
+ G+ G+ YL +HR + ++S FG +R + P
Sbjct: 149 TIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 221 DAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAG-LVMGKLPSDKFFQHTN 278
DA T + + + APE + T + D++ FG ++ L G+ P ++ TN
Sbjct: 206 DAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP---YWNMTN 260
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
G++YLH + R+IHR ++ +I FG A I + GT Y
Sbjct: 154 GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCGTPNY 208
Query: 238 IAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
IAPE L + + DI+ G +L L++GK P
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 18/170 (10%)
Query: 122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILND----------VSQGRRELDWLARH-- 169
SE+N + +++H N+ + LYI+ + +++G +E +L
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 170 -RIALGLACGLEYLHMHH--CPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHI 226
R+ L L+ H ++HR ++ FG AR + H
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTS 171
Query: 227 TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ 275
VGT Y++PE + ++ EK DI+ G LL L P F Q
Sbjct: 172 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 55 KIGSGGCGEVYKAELPGQNGRMISIKKI---VGPPMDAAALIEEDSMLLNKKMRQIQSEM 111
+IG G G+V+KA GR +++K++ G + I E ++L + + + + +
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 112 LLNKKMRQIQSEINTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR 170
L ++ TV + R L + HV D L L+ V + + +
Sbjct: 78 RL--------FDVCTVSRTDRETKLTLVFEHV---DQDLTTYLDKVPEPGVPTETIK--D 124
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
+ L GL++LH H R++HR + +++ FG AR + ++
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTS 178
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY 255
VV T+ Y APE L + D++
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLW 203
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 55 KIGSGGCGEVYKAELPGQNGRMISIKKI---VGPPMDAAALIEEDSMLLNKKMRQIQSEM 111
+IG G G+V+KA GR +++K++ G + I E ++L + + + + +
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 112 LLNKKMRQIQSEINTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR 170
L ++ TV + R L + HV D L L+ V + + +
Sbjct: 78 RL--------FDVCTVSRTDRETKLTLVFEHV---DQDLTTYLDKVPEPGVPTETI--KD 124
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
+ L GL++LH H R++HR + +++ FG AR + ++
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTS 178
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY 255
VV T+ Y APE L + D++
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLW 203
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 55 KIGSGGCGEVYKAELPGQNGRMISIKKI---VGPPMDAAALIEEDSMLLNKKMRQIQSEM 111
+IG G G+V+KA GR +++K++ G + I E ++L + + + + +
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 112 LLNKKMRQIQSEINTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR 170
L ++ TV + R L + HV D L L+ V + + +
Sbjct: 78 RL--------FDVCTVSRTDRETKLTLVFEHV---DQDLTTYLDKVPEPGVPTETI--KD 124
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
+ L GL++LH H R++HR + +++ FG AR + ++
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTS 178
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY 255
VV T+ Y APE L + D++
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLW 203
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 37/221 (16%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LEKIG G G VYKA+ G ++KKI L +ED + + +R+I
Sbjct: 7 LEKIGEGTYGVVYKAQ--NNYGETFALKKI--------RLEKEDEGIPSTTIREIS---- 52
Query: 113 LNKKMRQIQSEINTVGQIRH--RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR 170
+ K+++ S I + + H + L + H+ + LL DV +G L+ +
Sbjct: 53 ILKELK--HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLL----DVCEGG--LESVTAKS 104
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA--IP-DAHTHIT 227
L L G+ Y H R++HR E +I+ FG ARA IP +TH
Sbjct: 105 FLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-- 159
Query: 228 TSNVVGTVEYIAPEYLQ-MLTLTEKCDIY-FGALLAGLVMG 266
+ T+ Y AP+ L + DI+ G + A +V G
Sbjct: 160 ---EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 33/220 (15%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEED---SMLLNKKMRQIQSEML 112
+G G G+V+ AE N + +IK + L+++D +M+ + +
Sbjct: 26 LGKGSFGKVFLAEFKKTN-QFFAIKAL----KKDVVLMDDDVECTMVEKRVLSLAWEHPF 80
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIA 172
L Q++ N + + N L+ H+ CH D+S+ A
Sbjct: 81 LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS--CHKF----DLSRATF---------YA 125
Query: 173 LGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA--IPDAHTHITTSN 230
+ GL++LH I++R +I+ FG + + DA T+
Sbjct: 126 AEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA----KTNE 178
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
GT +YIAPE L D + FG LL +++G+ P
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 89/240 (37%), Gaps = 53/240 (22%)
Query: 56 IGSGGCGEVYKAEL--PGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLL 113
IGSG GEV L PGQ ++IK + A E
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKAL------KAGYTE------------------- 91
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR--- 170
++ R SE + +GQ H N+ L VTR L I+ + + +L H
Sbjct: 92 -RQRRDFLSEASIMGQFDHPNIIRLEGVVTR--GRLAMIVTEYMENGSLDTFLRTHDGQF 148
Query: 171 -------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI---P 220
+ G+ G+ YL +HR + ++S FG +R + P
Sbjct: 149 TIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 221 DAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAG-LVMGKLPSDKFFQHTN 278
DA T + + + APE + T + D++ FG ++ L G+ P ++ TN
Sbjct: 206 DAAYTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP---YWNMTN 260
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 84/211 (39%), Gaps = 32/211 (15%)
Query: 71 GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQI 130
G G++ +KKI G DA L +M + KK + + K R I E+N
Sbjct: 35 GSFGKVFLVKKISGS--DARQLY---AMKVLKKATLKVRDRVRTKMERDILVEVN----- 84
Query: 131 RHRNLHPLLA--HVTRPDCHLLYILNDVSQGRRELDWLARH--------RIALG-LACGL 179
HP + H LY++ D +G L++ + L LA L
Sbjct: 85 -----HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 180 EYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEYIA 239
++LH II+R +++ FG ++ D + GTVEY+A
Sbjct: 140 DHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMA 194
Query: 240 PEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
PE + T+ D + FG L+ ++ G LP
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 18/164 (10%)
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR--- 170
K+ R E + +GQ H N+ L VTR ++ ++ + G + +L +H
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGK-PVMIVIEFMENGALDA-FLRKHDGQF 142
Query: 171 -------IALGLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDA 222
+ G+A G+ YL M + +HR + ++S FG +R I D
Sbjct: 143 TVIQLVGMLRGIAAGMRYLADMGY----VHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 223 HTHI-TTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM 265
+ TT+ V + APE +Q T D++ ++ VM
Sbjct: 199 PEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 26 NLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 SEMLLNKKMRQIQSEINTVGQIRH---RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW 165
+ + R ++ E N V + H +L+ ++ D H+ +++ + +G
Sbjct: 85 GLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG------ 137
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L+Y+H IIHR E +I FG AR HT
Sbjct: 138 -------------LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTD 176
Query: 226 ITTSNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
+ V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 87/219 (39%), Gaps = 32/219 (14%)
Query: 63 EVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQS 122
E+ K G G++ +KKI G DA L +M + KK + + K R I
Sbjct: 27 ELLKVLGQGSFGKVFLVKKISGS--DARQLY---AMKVLKKATLKVRDRVRTKMERDILV 81
Query: 123 EINTVGQIRHRNLHPLLA--HVTRPDCHLLYILNDVSQGRRELDWLARH--------RIA 172
E+N HP + H LY++ D +G L++ +
Sbjct: 82 EVN----------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 131
Query: 173 LG-LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
L LA L++LH II+R +++ FG ++ D +
Sbjct: 132 LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSF 186
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
GTVEY+APE + T+ D + FG L+ ++ G LP
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 19/167 (11%)
Query: 121 QSEINTVGQIRHRNLHPLLAH--VTRPDCHLLYILNDVSQGRRELDWLARH--------R 170
++EI +RH N+ +A +R L+++ + D+L R R
Sbjct: 50 ETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR 109
Query: 171 IALGLACGLEYLHM-----HHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
+A+ ACGL +LH+ P I HR ++ I+ G A +
Sbjct: 110 LAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDY 169
Query: 226 ITTSN--VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLA-GLVMGKL 268
+ N VGT Y+APE L T+ + Y + + A GLV+ ++
Sbjct: 170 LDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 22 NLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 109 SEMLLNKKMRQIQSEINTVGQIRH---RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW 165
+ + R ++ E N V + H +L+ ++ D H+ +++ + +G
Sbjct: 81 GLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG------ 133
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L+Y+H IIHR E +I FG AR HT
Sbjct: 134 -------------LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD 172
Query: 226 ITTSNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
+ V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 87/219 (39%), Gaps = 32/219 (14%)
Query: 63 EVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQS 122
E+ K G G++ +KKI G DA L +M + KK + + K R I
Sbjct: 28 ELLKVLGQGSFGKVFLVKKISGS--DARQLY---AMKVLKKATLKVRDRVRTKMERDILV 82
Query: 123 EINTVGQIRHRNLHPLLA--HVTRPDCHLLYILNDVSQGRRELDWLARH--------RIA 172
E+N HP + H LY++ D +G L++ +
Sbjct: 83 EVN----------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 132
Query: 173 LG-LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
L LA L++LH II+R +++ FG ++ D +
Sbjct: 133 LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSF 187
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
GTVEY+APE + T+ D + FG L+ ++ G LP
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
A +A G+E+L C +HR +I FG AR I ++ N
Sbjct: 177 FAYQVAKGMEFLEFKSC---VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGN 233
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
V+++APE L T K D++ +G LL
Sbjct: 234 ARLPVKWMAPESLFEGIYTIKSDVWSYGILL 264
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 170 RIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTS 229
++++ + GL YL H +I+HR E ++ FG + + D +
Sbjct: 111 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MAN 164
Query: 230 NVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
VGT Y++PE LQ + + DI+ G L + +G+ P
Sbjct: 165 EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 33/220 (15%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEED---SMLLNKKMRQIQSEML 112
+G G G+V+ AE N + +IK + L+++D +M+ + +
Sbjct: 25 LGKGSFGKVFLAEFKKTN-QFFAIKAL----KKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIA 172
L Q++ N + + N L+ H+ CH D+S+ A
Sbjct: 80 LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS--CHKF----DLSRATF---------YA 124
Query: 173 LGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA--IPDAHTHITTSN 230
+ GL++LH I++R +I+ FG + + DA T+
Sbjct: 125 AEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA----KTNX 177
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
GT +YIAPE L D + FG LL +++G+ P
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 26 NLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 SEMLLNKKMRQIQSEINTVGQIRH---RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW 165
+ + R ++ E N V + H +L+ ++ D H+ +++ + +G
Sbjct: 85 GLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG------ 137
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L+Y+H IIHR E +I FG AR HT
Sbjct: 138 -------------LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD 176
Query: 226 ITTSNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
+ V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 63/164 (38%), Gaps = 18/164 (10%)
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR--- 170
+K+ R SE + +GQ H N+ L VT+ C + I+ + + LD R
Sbjct: 71 DKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--CKPVMIITEYMEN-GSLDAFLRKNDGR 127
Query: 171 --------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PD 221
+ G+ G++YL +HR + ++S FG +R + D
Sbjct: 128 FTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 222 AHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM 265
TT + + APE + T D++ ++ VM
Sbjct: 185 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 26 NLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 SEMLLNKKMRQIQSEINTVGQIRH---RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW 165
+ + R ++ E N V + H +L+ ++ D H+ +++ + +G
Sbjct: 85 GLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG------ 137
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L+Y+H IIHR E +I FG AR HT
Sbjct: 138 -------------LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD 176
Query: 226 ITTSNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
+ V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 37/210 (17%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR-------- 170
+I+ E++ + Q+ H N+ L V ++ IL VS G D+LA+
Sbjct: 61 EIEREVSILRQVLHHNV-ITLHDVYENRTDVVLILELVSGGEL-FDFLAQKESLSEEEAT 118
Query: 171 -IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXI-EARISGFGFARAIPDAHTHITT 228
+ G+ YLH + I ++ FG A I D +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEF 175
Query: 229 SNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP------------------ 269
N+ GT E++APE + L + D++ G + L+ G P
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 270 --SDKFFQHTNEMSFVKWMRNVMASENPKR 297
++FF HT+E++ ++R ++ E KR
Sbjct: 236 DFDEEFFSHTSELA-KDFIRKLLVKETRKR 264
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 22 NLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 109 SEMLLNKKMRQIQSEINTVGQIRH---RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW 165
+ + R ++ E N V + H +L+ ++ D H+ +++ + +G
Sbjct: 81 GLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG------ 133
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L+Y+H IIHR E +I FG AR HT
Sbjct: 134 -------------LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD 172
Query: 226 ITTSNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
+ V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 173 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 31/221 (14%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 32 NLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 109 SEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLAR 168
+ + R ++ E N V L+ H+ D LN++ + ++ D +
Sbjct: 91 GLLDVFTPARSLE-EFNDVY---------LVTHLMGAD------LNNIVKCQKLTDDHVQ 134
Query: 169 HRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITT 228
I L GL+Y+H IIHR E +I FG AR HT
Sbjct: 135 FLIYQILR-GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 185
Query: 229 SNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
+ V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 26 NLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 SEMLLNKKMRQIQSEINTVGQIRH---RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW 165
+ + R ++ E N V + H +L+ ++ D H+ +++ + +G
Sbjct: 85 GLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG------ 137
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L+Y+H IIHR E +I FG AR HT
Sbjct: 138 -------------LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD 176
Query: 226 ITTSNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
+ V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWY 193
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWY 193
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 148 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWY 199
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 26 NLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 SEMLLNKKMRQIQSEINTVGQIRH---RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW 165
+ + R ++ E N V + H +L+ ++ D H+ +++ + +G
Sbjct: 85 GLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG------ 137
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L+Y+H IIHR E +I FG AR HT
Sbjct: 138 -------------LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD 176
Query: 226 ITTSNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
+ V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 104 MRQIQSEMLLNKKM-RQIQSEINTVGQIRHRNL-HPLLA--HVTRPDCHLLYILNDVSQG 159
++ +Q + +L KK + I SE N + +N+ HP L H + LY + D G
Sbjct: 68 VKVLQKKAILKKKEEKHIMSERNVL----LKNVKHPFLVGLHFSFQTADKLYFVLDYING 123
Query: 160 RRELDWLARHR---------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARI 210
L R R A +A L YLH I++R +
Sbjct: 124 GELFYHLQRERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVL 180
Query: 211 SGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ FG + + + TTS GT EY+APE L D + GA+L ++ G P
Sbjct: 181 TDFGLCKE--NIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
Query: 270 SDKFFQHTNEM 280
+ ++T EM
Sbjct: 239 F--YSRNTAEM 247
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 37/210 (17%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR-------- 170
+I+ E++ + Q+ H N+ L V ++ IL VS G D+LA+
Sbjct: 61 EIEREVSILRQVLHHNV-ITLHDVYENRTDVVLILELVSGGEL-FDFLAQKESLSEEEAT 118
Query: 171 -IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXI-EARISGFGFARAIPDAHTHITT 228
+ G+ YLH + I ++ FG A I D +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEF 175
Query: 229 SNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP------------------ 269
N+ GT E++APE + L + D++ G + L+ G P
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 270 --SDKFFQHTNEMSFVKWMRNVMASENPKR 297
++FF HT+E++ ++R ++ E KR
Sbjct: 236 DFDEEFFSHTSELA-KDFIRKLLVKETRKR 264
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 45 NLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 103
Query: 109 SEMLLNKKMRQIQSEINTVGQIRH---RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW 165
+ + R ++ E N V + H +L+ ++ D H+ +++ + +G
Sbjct: 104 GLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG------ 156
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L+Y+H IIHR E +I FG AR HT
Sbjct: 157 -------------LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD 195
Query: 226 ITTSNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
+ V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 46 NLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 109 SEMLLNKKMRQIQSEINTVGQIRH---RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW 165
+ + R ++ E N V + H +L+ ++ D H+ +++ + +G
Sbjct: 105 GLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG------ 157
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L+Y+H IIHR E +I FG AR HT
Sbjct: 158 -------------LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD 196
Query: 226 ITTSNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
+ V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 49/314 (15%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LE +G G GEV++ G+N +++K + D + E + L N M ++ E +
Sbjct: 13 LECVGKGRYGEVWRGSWQGEN---VAVK--IFSSRDEKSWFRE-TELYNTVM--LRHENI 64
Query: 113 LNKKMRQIQSEINTVGQIRHRNLH-PLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRI 171
L I S++ + RH + L+ H H + L D Q LD ++ RI
Sbjct: 65 LGF----IASDMTS----RHSSTQLWLITHY-----HEMGSLYDYLQ-LTTLDTVSCLRI 110
Query: 172 ALGLACGLEYLHM-----HHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHI 226
L +A GL +LH+ P I HR + I+ G A + +
Sbjct: 111 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL 170
Query: 227 TTSN--VVGTVEYIAPEYLQMLTLTE------KCDIYFGALLAGLVMGKLPSDKFFQHT- 277
N VGT Y+APE L + + DI+ L+ V ++ S+ +
Sbjct: 171 DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230
Query: 278 --------NEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNE 329
N+ SF MR V+ + + I ++ + + ++K C ++P+
Sbjct: 231 PPFYDVVPNDPSFED-MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMK---ECWYQNPSA 286
Query: 330 RPNSKDVRRMLSQI 343
R + +++ L++I
Sbjct: 287 RLTALRIKKTLTKI 300
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 36 NLAPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 94
Query: 109 SEMLLNKKMRQIQSEINTVGQIRH---RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW 165
+ + R ++ E N V + H +L+ ++ D H+ +++ + +G
Sbjct: 95 GLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG------ 147
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L+Y+H IIHR E +I FG AR HT
Sbjct: 148 -------------LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD 186
Query: 226 ITTSNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
+ V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 187 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+A G+ +L +C IHR A+I FG AR I + +I N
Sbjct: 167 VAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 223
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALL 260
V+++APE + T + D++ +G LL
Sbjct: 224 VKWMAPESIFDCVYTVQSDVWSYGILL 250
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 188
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 188
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 188
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 188
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 188
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 148 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 199
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 49/314 (15%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LE +G G GEV++ G+N +++K + D + E + L N M ++ E +
Sbjct: 13 LECVGKGRYGEVWRGSWQGEN---VAVK--IFSSRDEKSWFRE-TELYNTVM--LRHENI 64
Query: 113 LNKKMRQIQSEINTVGQIRHRNLH-PLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRI 171
L I S++ + RH + L+ H H + L D Q LD ++ RI
Sbjct: 65 LGF----IASDMTS----RHSSTQLWLITHY-----HEMGSLYDYLQ-LTTLDTVSCLRI 110
Query: 172 ALGLACGLEYLHM-----HHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHI 226
L +A GL +LH+ P I HR + I+ G A + +
Sbjct: 111 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL 170
Query: 227 TTSNV--VGTVEYIAPEYLQMLTLTE------KCDIYFGALLAGLVMGKLPSDKFFQHT- 277
N VGT Y+APE L + + DI+ L+ V ++ S+ +
Sbjct: 171 DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230
Query: 278 --------NEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNE 329
N+ SF MR V+ + + I ++ + + ++K C ++P+
Sbjct: 231 PPFYDVVPNDPSFED-MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMK---ECWYQNPSA 286
Query: 330 RPNSKDVRRMLSQI 343
R + +++ L++I
Sbjct: 287 RLTALRIKKTLTKI 300
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 195
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 190
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 193
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 136 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 187
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 188
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 127/315 (40%), Gaps = 49/315 (15%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
LE +G G GEV++ G+N +++K + D + E + L N M ++ E +
Sbjct: 42 LECVGKGRYGEVWRGSWQGEN---VAVK--IFSSRDEKSWFRE-TELYNTVM--LRHENI 93
Query: 113 LNKKMRQIQSEINTVGQIRHRNLH-PLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRI 171
L I S++ + RH + L+ H H + L D Q LD ++ RI
Sbjct: 94 LGF----IASDMTS----RHSSTQLWLITHY-----HEMGSLYDYLQ-LTTLDTVSCLRI 139
Query: 172 ALGLACGLEYLHM-----HHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHI 226
L +A GL +LH+ P I HR + I+ G A + +
Sbjct: 140 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL 199
Query: 227 TTSNV--VGTVEYIAPEYLQMLTLTE------KCDIYFGALLAGLVMGKLPSDKFFQHT- 277
N VGT Y+APE L + + DI+ L+ V ++ S+ +
Sbjct: 200 DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 259
Query: 278 --------NEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNE 329
N+ SF MR V+ + + I ++ + + ++K C ++P+
Sbjct: 260 PPFYDVVPNDPSFED-MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMK---ECWYQNPSA 315
Query: 330 RPNSKDVRRMLSQIQ 344
R + +++ L++I
Sbjct: 316 RLTALRIKKTLTKID 330
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 190
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 200
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 20/165 (12%)
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR--- 170
+K+ R SE + +GQ H N+ L VT+ C + I+ + + LD R
Sbjct: 50 DKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--CKPVMIITEYMEN-GSLDAFLRKNDGR 106
Query: 171 --------IALGLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-P 220
+ G+ G++YL M + +HR + ++S FG +R +
Sbjct: 107 FTVIQLVGMLRGIGSGMKYLSDMSY----VHRDLAARNILVNSNLVCKVSDFGMSRVLED 162
Query: 221 DAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM 265
D TT + + APE + T D++ ++ VM
Sbjct: 163 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 207
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 190
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 200
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 37/210 (17%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR-------- 170
+I+ E++ + Q+ H N+ L V ++ IL VS G D+LA+
Sbjct: 61 EIEREVSILRQVLHHNV-ITLHDVYENRTDVVLILELVSGGEL-FDFLAQKESLSEEEAT 118
Query: 171 -IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXI-EARISGFGFARAIPDAHTHITT 228
+ G+ YLH + I ++ FG A I D +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEF 175
Query: 229 SNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP------------------ 269
N+ GT E++APE + L + D++ G + L+ G P
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 270 --SDKFFQHTNEMSFVKWMRNVMASENPKR 297
++FF HT+E++ ++R ++ E KR
Sbjct: 236 DFDEEFFSHTSELA-KDFIRKLLVKETRKR 264
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 200
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRWY 188
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWY 194
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 20/165 (12%)
Query: 114 NKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR--- 170
+K+ R SE + +GQ H N+ L VT+ C + I+ + + LD R
Sbjct: 56 DKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--CKPVMIITEYMEN-GSLDAFLRKNDGR 112
Query: 171 --------IALGLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-P 220
+ G+ G++YL M + +HR + ++S FG +R +
Sbjct: 113 FTVIQLVGMLRGIGSGMKYLSDMSY----VHRDLAARNILVNSNLVCKVSDFGMSRVLED 168
Query: 221 DAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM 265
D TT + + APE + T D++ ++ VM
Sbjct: 169 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 213
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 193
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 188
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 208
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 185
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 194
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 185
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 211
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 156 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 207
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWY 190
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 135 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 186
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 184
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 194
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 188
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWY 195
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWY 195
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWY 195
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 86/229 (37%), Gaps = 50/229 (21%)
Query: 54 EKIGSGGCGEVYKAEL--PGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEM 111
E IG+G GEV + L PG+ ++IK + G
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGG-------------------------- 55
Query: 112 LLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR- 170
++ R+ SE + +GQ H N+ L VT + + IL + + LD R
Sbjct: 56 YTERQRREFLSEASIMGQFEHPNIIRLEGVVT--NSMPVMILTEFMEN-GALDSFLRLND 112
Query: 171 ----------IALGLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI 219
+ G+A G+ YL M + +HR + ++S FG +R +
Sbjct: 113 GQFTVIQLVGMLRGIASGMRYLAEMSY----VHRDLAARNILVNSNLVCKVSDFGLSRFL 168
Query: 220 PDAHTHITTSNVVG---TVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM 265
+ + T ++ +G + + APE + T D + ++ VM
Sbjct: 169 EENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 86/229 (37%), Gaps = 50/229 (21%)
Query: 54 EKIGSGGCGEVYKAEL--PGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEM 111
E IG+G GEV + L PG+ ++IK + G
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGG-------------------------- 53
Query: 112 LLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR- 170
++ R+ SE + +GQ H N+ L VT + + IL + + LD R
Sbjct: 54 YTERQRREFLSEASIMGQFEHPNIIRLEGVVT--NSMPVMILTEFMEN-GALDSFLRLND 110
Query: 171 ----------IALGLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI 219
+ G+A G+ YL M + +HR + ++S FG +R +
Sbjct: 111 GQFTVIQLVGMLRGIASGMRYLAEMSY----VHRDLAARNILVNSNLVCKVSDFGLSRFL 166
Query: 220 PDAHTHITTSNVVG---TVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM 265
+ + T ++ +G + + APE + T D + ++ VM
Sbjct: 167 EENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 37/224 (16%)
Query: 52 SLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGP---PMDAAALIEEDSMLLNKKMRQIQ 108
+L +GSG G V A + G +++KK+ P + A E +L + K +
Sbjct: 46 NLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 109 SEMLLNKKMRQIQSEINTVGQIRH---RNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW 165
+ + R ++ E N V + H +L+ ++ D H+ +++ + +G
Sbjct: 105 GLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG------ 157
Query: 166 LARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
L+Y+H IIHR E +I FG AR HT
Sbjct: 158 -------------LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD 196
Query: 226 ITTSNVVGTVEYIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
V T Y APE L + + DI+ G ++A L+ G+
Sbjct: 197 DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 14/121 (11%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E RI FG AR + T V T Y
Sbjct: 135 GLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT-----GYVATRWY 186
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENP 295
APE L + + DI+ G ++A L+ GK F ++ + +K + V+ + +P
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK----ALFPGSDYIDQLKRIMEVVGTPSP 242
Query: 296 K 296
+
Sbjct: 243 E 243
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 11/114 (9%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A +A GL +L II+R +I+ FG + + +TT
Sbjct: 448 AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXF 502
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP-----SDKFFQHTNE 279
GT +YIAPE + + D + FG LL ++ G+ P D+ FQ E
Sbjct: 503 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 14/121 (11%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E RI FG AR + T V T Y
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVATRWY 194
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENP 295
APE L + + DI+ G ++A L+ GK F ++ + +K + V+ + +P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK----ALFPGSDYIDQLKRIMEVVGTPSP 250
Query: 296 K 296
+
Sbjct: 251 E 251
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT V T Y
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGYVATRWY 211
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + + DI+ G ++A L+ G+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 117/320 (36%), Gaps = 47/320 (14%)
Query: 32 SPLIKKAKDLAFLEKKGGLASLEKIGSGGCGEVYKAEL--PGQNGRMISIKKIVGPPMDA 89
S L+ + KD+ ++ S IG G G VY E QN +IK
Sbjct: 5 SALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIK--------- 55
Query: 90 AALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPD-CH 148
S+ +M+Q+++ + MR + + N + I L HV P CH
Sbjct: 56 -------SLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLPHVLLPYMCH 107
Query: 149 --LLYILNDVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXI 206
LL + + D ++ L +A G+EYL + +HR
Sbjct: 108 GDLLQFIRSPQRNPTVKDLIS---FGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESF 161
Query: 207 EARISGFGFARAIPDAHTHITTSNVVG--TVEYIAPEYLQMLTLTEKCDIY-FGALLAGL 263
+++ FG AR I D + + V++ A E LQ T K D++ FG LL L
Sbjct: 162 TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWEL 221
Query: 264 VMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCT 323
+ P ++H + ++ P+ DS + ++ C
Sbjct: 222 LTRGAPP---YRHIDPFDLTHFLAQGRRLPQPEYCPDS-------------LYQVMQQCW 265
Query: 324 LEDPNERPNSKDVRRMLSQI 343
DP RP + + + QI
Sbjct: 266 EADPAVRPTFRVLVGEVEQI 285
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 14/121 (11%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E RI FG AR + T V T Y
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVATRWY 194
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENP 295
APE L + + DI+ G ++A L+ GK F ++ + +K + V+ + +P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK----ALFPGSDYIDQLKRIMEVVGTPSP 250
Query: 296 K 296
+
Sbjct: 251 E 251
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 11/114 (9%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A +A GL +L II+R +I+ FG + + +TT
Sbjct: 127 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXF 181
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP-----SDKFFQHTNE 279
GT +YIAPE + + D + FG LL ++ G+ P D+ FQ E
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
LA GL++LH II+R +++ FG ++ D + GT
Sbjct: 139 LALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEK--KAYSFCGT 193
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
VEY+APE + + D + +G L+ ++ G LP
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 19/169 (11%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+A G+ +L +C IHR +I FG AR I + ++ N
Sbjct: 154 VAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASE 293
V+++APE + T + D++ +G L L L S + + F K ++
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELF--SLGSSPYPGMPVDSKFYKMIKEGFRML 268
Query: 294 NPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQ 342
+P+ A +M ++K C DP +RP K + +++ +
Sbjct: 269 SPEHA----------PAEMYDIMKT---CWDADPLKRPTFKQIVQLIEK 304
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 19/169 (11%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+A G+ +L +C IHR +I FG AR I + ++ N
Sbjct: 170 VAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASE 293
V+++APE + T + D++ +G L L L S + + F K ++
Sbjct: 227 VKWMAPESIFNCVYTFESDVWSYGIFLWELF--SLGSSPYPGMPVDSKFYKMIKEGFRML 284
Query: 294 NPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQ 342
+P+ A +M ++K C DP +RP K + +++ +
Sbjct: 285 SPEHA----------PAEMYDIMKT---CWDADPLKRPTFKQIVQLIEK 320
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 145 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 145 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 19/169 (11%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+A G+ +L +C IHR +I FG AR I + ++ N
Sbjct: 172 VAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASE 293
V+++APE + T + D++ +G L L L S + + F K ++
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELF--SLGSSPYPGMPVDSKFYKMIKEGFRML 286
Query: 294 NPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQ 342
+P+ A +M ++K C DP +RP K + +++ +
Sbjct: 287 SPEHA----------PAEMYDIMKT---CWDADPLKRPTFKQIVQLIEK 322
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 19/169 (11%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+A G+ +L +C IHR +I FG AR I + ++ N
Sbjct: 177 VAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASE 293
V+++APE + T + D++ +G L L L S + + F K ++
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELF--SLGSSPYPGMPVDSKFYKMIKEGFRML 291
Query: 294 NPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQ 342
+P+ A +M ++K C DP +RP K + +++ +
Sbjct: 292 SPEHA----------PAEMYDIMKT---CWDADPLKRPTFKQIVQLIEK 327
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 34.3 bits (77), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 137 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 193
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 194 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 237
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 172 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 228
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 229 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 272
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 162 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 218
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 219 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 262
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 152 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 208
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 209 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 252
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 160 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 146 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 17/140 (12%)
Query: 121 QSEINTVGQIRHRNLHPLLAHVTRPDCHL--LYILNDVSQGRRELDWLARH--------R 170
++EI +RH N+ +A + + L++++D + D+L R+ +
Sbjct: 84 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK 143
Query: 171 IALGLACGLEYLHMHHC-----PRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHT- 224
+AL A GL +LHM P I HR I+ G A A
Sbjct: 144 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 203
Query: 225 -HITTSNVVGTVEYIAPEYL 243
I ++ VGT Y+APE L
Sbjct: 204 IDIAPNHRVGTKRYMAPEVL 223
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 146 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 16/135 (11%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEA---RISGFGFARAIPDAHTHITTSNV 231
++ L YLH + RIIHR + +I G+A+ + +
Sbjct: 131 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEF 184
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVM 290
VGT++Y+APE L+ T D + FG L + G P +Q V+W V
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP------VQWHGKVR 238
Query: 291 ASENPKRAIDSKLVG 305
N + L G
Sbjct: 239 EKSNEHIVVYDDLTG 253
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI---PDAHTHITTSNVVGT 234
GL+Y+H ++IHR E +I FG AR + P H + T V T
Sbjct: 171 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT-EYVAT 226
Query: 235 VEYIAPEY-LQMLTLTEKCDIY-----FGALLA 261
Y APE L + T+ D++ FG +LA
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 16/135 (11%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEA---RISGFGFARAIPDAHTHITTSNV 231
++ L YLH + RIIHR + +I G+A+ + +
Sbjct: 130 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEF 183
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVM 290
VGT++Y+APE L+ T D + FG L + G P +Q V+W V
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP------VQWHGKVR 237
Query: 291 ASENPKRAIDSKLVG 305
N + L G
Sbjct: 238 EKSNEHIVVYDDLTG 252
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI---PDAHTHITTSNVVGT 234
GL+Y+H ++IHR E +I FG AR + P H + T V T
Sbjct: 170 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT-EYVAT 225
Query: 235 VEYIAPEY-LQMLTLTEKCDIY-----FGALLA 261
Y APE L + T+ D++ FG +LA
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 160 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A ++ GL +LH II+R +I+ FG + +TT
Sbjct: 126 AAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE--HMMDGVTTREF 180
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSD 271
GT +YIAPE + + D + +G LL ++ G+ P D
Sbjct: 181 CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 19/169 (11%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+A G+ +L +C IHR +I FG AR I + ++ N
Sbjct: 177 VAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASE 293
V+++APE + T + D++ +G L L L S + + F K ++
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELF--SLGSSPYPGMPVDSKFYKMIKEGFRML 291
Query: 294 NPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQ 342
+P+ A +M ++K C DP +RP K + +++ +
Sbjct: 292 SPEHA----------PAEMYDIMKT---CWDADPLKRPTFKQIVQLIEK 327
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 160 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 34/256 (13%)
Query: 121 QSEINTVGQIRHRNLHPLLAHVTRPDCHL--LYILNDVSQGRRELDWLARH--------R 170
++EI +RH N+ +A + + L++++D + D+L R+ +
Sbjct: 51 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK 110
Query: 171 IALGLACGLEYLHMHHC-----PRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHT- 224
+AL A GL +LHM P I HR I+ G A A
Sbjct: 111 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 170
Query: 225 -HITTSNVVGTVEYIAPEYL------QMLTLTEKCDIY-----FGALLAGLVMGKLPSDK 272
I ++ VGT Y+APE L + ++ DIY F + +G + D
Sbjct: 171 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 230
Query: 273 ---FFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNE 329
++ V+ MR V+ + + I ++ C E + ++ KI C +
Sbjct: 231 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW--QSC-EALRVMAKIMRECWYANGAA 287
Query: 330 RPNSKDVRRMLSQIQH 345
R + +++ LSQ+
Sbjct: 288 RLTALRIKKTLSQLSQ 303
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 34/256 (13%)
Query: 121 QSEINTVGQIRHRNLHPLLAHVTRPDCHL--LYILNDVSQGRRELDWLARH--------R 170
++EI +RH N+ +A + + L++++D + D+L R+ +
Sbjct: 48 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK 107
Query: 171 IALGLACGLEYLHMHHC-----PRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHT- 224
+AL A GL +LHM P I HR I+ G A A
Sbjct: 108 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 167
Query: 225 -HITTSNVVGTVEYIAPEYL------QMLTLTEKCDIY-----FGALLAGLVMGKLPSDK 272
I ++ VGT Y+APE L + ++ DIY F + +G + D
Sbjct: 168 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 227
Query: 273 ---FFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNE 329
++ V+ MR V+ + + I ++ C E + ++ KI C +
Sbjct: 228 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW--QSC-EALRVMAKIMRECWYANGAA 284
Query: 330 RPNSKDVRRMLSQIQH 345
R + +++ LSQ+
Sbjct: 285 RLTALRIKKTLSQLSQ 300
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 34/256 (13%)
Query: 121 QSEINTVGQIRHRNLHPLLAHVTRPDCHL--LYILNDVSQGRRELDWLARH--------R 170
++EI +RH N+ +A + + L++++D + D+L R+ +
Sbjct: 45 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK 104
Query: 171 IALGLACGLEYLHMHHC-----PRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHT- 224
+AL A GL +LHM P I HR I+ G A A
Sbjct: 105 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 164
Query: 225 -HITTSNVVGTVEYIAPEYL------QMLTLTEKCDIY-----FGALLAGLVMGKLPSDK 272
I ++ VGT Y+APE L + ++ DIY F + +G + D
Sbjct: 165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 224
Query: 273 ---FFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNE 329
++ V+ MR V+ + + I ++ C E + ++ KI C +
Sbjct: 225 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW--QSC-EALRVMAKIMRECWYANGAA 281
Query: 330 RPNSKDVRRMLSQIQH 345
R + +++ LSQ+
Sbjct: 282 RLTALRIKKTLSQLSQ 297
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 17/140 (12%)
Query: 121 QSEINTVGQIRHRNLHPLLAHVTRPDCHL--LYILNDVSQGRRELDWLARH--------R 170
++EI +RH N+ +A + + L++++D + D+L R+ +
Sbjct: 71 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK 130
Query: 171 IALGLACGLEYLHMHHC-----PRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHT- 224
+AL A GL +LHM P I HR I+ G A A
Sbjct: 131 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 190
Query: 225 -HITTSNVVGTVEYIAPEYL 243
I ++ VGT Y+APE L
Sbjct: 191 IDIAPNHRVGTKRYMAPEVL 210
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 163 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 219
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 220 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 263
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 179 LEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEYI 238
L+ L H ++IHR +++ FGF I + +T +VGT ++
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWM 183
Query: 239 APEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
APE + K DI+ G + ++ G+ P
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
GL+Y+H IIHR E +I FG AR HT + V T Y
Sbjct: 166 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWY 217
Query: 238 IAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK 267
APE L + DI+ G ++A L+ G+
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 36/257 (14%)
Query: 121 QSEINTVGQIRHRNLHPLLAHVTRPDCHL--LYILNDVSQGRRELDWLARH--------R 170
++EI +RH N+ +A + + L++++D + D+L R+ +
Sbjct: 46 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK 105
Query: 171 IALGLACGLEYLHMHHC-----PRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTH 225
+AL A GL +LHM P I HR I+ G A D+ T
Sbjct: 106 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATD 164
Query: 226 ---ITTSNVVGTVEYIAPEYL------QMLTLTEKCDIY-----FGALLAGLVMGKLPSD 271
I ++ VGT Y+APE L + ++ DIY F + +G + D
Sbjct: 165 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 224
Query: 272 K---FFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPN 328
++ V+ MR V+ + + I ++ C E + ++ KI C +
Sbjct: 225 YQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW--QSC-EALRVMAKIMRECWYANGA 281
Query: 329 ERPNSKDVRRMLSQIQH 345
R + +++ LSQ+
Sbjct: 282 ARLTALRIKKTLSQLSQ 298
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG AR I A +
Sbjct: 186 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 242
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 243 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 286
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 19/138 (13%)
Query: 146 DCHLLYILNDVSQGRRELDWLARHR---------IALGLACGLEYLHMHHCPRIIHRXXX 196
D +Y++ ++ +G LD + R + + + +EYLH ++HR
Sbjct: 87 DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLK 143
Query: 197 XXXXXXXXXI----EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKC 252
RI FGFA+ + + + T T ++APE L+ C
Sbjct: 144 PSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLERQGYDAAC 201
Query: 253 DIY-FGALLAGLVMGKLP 269
DI+ G LL ++ G P
Sbjct: 202 DIWSLGVLLYTMLTGYTP 219
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 179 LEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEYI 238
L+ L H ++IHR +++ FGF I + +T +VGT ++
Sbjct: 127 LQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWM 184
Query: 239 APEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
APE + K DI+ G + ++ G+ P
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 226 ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP-----SDKFFQH--T 277
+TT+ GT +YIAPE LQ + D + G LL ++ G P D F+
Sbjct: 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
Query: 278 NEMSFVKWM 286
+E+ + W+
Sbjct: 239 DEVVYPTWL 247
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 37/210 (17%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR-------- 170
+I+ E++ + Q+ H N+ L V ++ IL VS G D+LA+
Sbjct: 61 EIEREVSILRQVLHHNV-ITLHDVYENRTDVVLILELVSGGEL-FDFLAQKESLSEEEAT 118
Query: 171 -IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXI-EARISGFGFARAIPDAHTHITT 228
+ G+ YLH + I ++ FG A I D +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEF 175
Query: 229 SNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP------------------ 269
N+ GT E++APE + L + D++ G + L+ G P
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 270 --SDKFFQHTNEMSFVKWMRNVMASENPKR 297
++FF T+E++ ++R ++ E KR
Sbjct: 236 DFDEEFFSQTSELA-KDFIRKLLVKETRKR 264
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 179 LEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEYI 238
L+ L H ++IHR +++ FGF I + S +VGT ++
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWM 183
Query: 239 APEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
APE + K DI+ G + ++ G+ P
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 100/242 (41%), Gaps = 25/242 (10%)
Query: 46 KKGGLASLEKIGSGGCGEVYKAEL----PGQNGRMISIKKIVGPPMDAAALIEEDSMLLN 101
K+ + ++G G G+V+ AE P Q+ ++++K + +A ++ LL
Sbjct: 11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLT 70
Query: 102 KKMRQIQSEMLLNKKMRQIQSE--INTVGQIRHRNLHPLL-AHVTRPDCHLLYILNDVSQ 158
+Q E ++ ++ + I ++H +L+ L AH PD L+ N +
Sbjct: 71 N----LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAH--GPDAVLMAEGNPPT- 123
Query: 159 GRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
EL IA +A G+ YL H +HR + +I FG +R
Sbjct: 124 ---ELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRD 177
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGL-VMGKLPSDKFFQH 276
+ + + + + ++ PE + T + D++ G +L + GK P ++Q
Sbjct: 178 VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP---WYQL 234
Query: 277 TN 278
+N
Sbjct: 235 SN 236
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 100/268 (37%), Gaps = 63/268 (23%)
Query: 31 FSPLIKKAKDLAFLEKKGGLASLEKIGSGGCGEVYKA-ELPGQNGRMISIKKIVGPPMDA 89
P K K LA + K+ L L+ +GSG G V+K +P G I I +
Sbjct: 14 LDPSEKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIP--EGESIKIPVCI------ 65
Query: 90 AALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTR----- 144
++ +K RQ + + + +G + H AH+ R
Sbjct: 66 -------KVIEDKSGRQ---------SFQAVTDHMLAIGSLDH-------AHIVRLLGLC 102
Query: 145 PDCHLLYILNDVSQGRRELDWLARHRIALG----------LACGLEYLHMHHCPRIIHRX 194
P L + + G LD + +HR ALG +A G+ YL H ++HR
Sbjct: 103 PGSSLQLVTQYLPLGSL-LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRN 158
Query: 195 XXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDI 254
+ +++ FG A +P + S ++++A E + T + D+
Sbjct: 159 LAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDV 218
Query: 255 Y-----------FGA-LLAGLVMGKLPS 270
+ FGA AGL + ++P
Sbjct: 219 WSYGVTVWELMTFGAEPYAGLRLAEVPD 246
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 19/138 (13%)
Query: 146 DCHLLYILNDVSQGRRELDWLARHR---------IALGLACGLEYLHMHHCPRIIHRXXX 196
D +Y++ ++ +G LD + R + + + +EYLH ++HR
Sbjct: 87 DGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLK 143
Query: 197 XXXXXXXXXI----EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKC 252
RI FGFA+ + + + T T ++APE L+ C
Sbjct: 144 PSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP--CYTANFVAPEVLERQGYDAAC 201
Query: 253 DIY-FGALLAGLVMGKLP 269
DI+ G LL + G P
Sbjct: 202 DIWSLGVLLYTXLTGYTP 219
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 37/210 (17%)
Query: 119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHR-------- 170
+I+ E++ + Q+ H N+ L V ++ IL VS G D+LA+
Sbjct: 61 EIEREVSILRQVLHHNV-ITLHDVYENRTDVVLILELVSGGEL-FDFLAQKESLSEEEAT 118
Query: 171 -IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXI-EARISGFGFARAIPDAHTHITT 228
+ G+ YLH + I ++ FG A I D +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEF 175
Query: 229 SNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP------------------ 269
N+ GT E++APE + L + D++ G + L+ G P
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 270 --SDKFFQHTNEMSFVKWMRNVMASENPKR 297
++FF T+E++ ++R ++ E KR
Sbjct: 236 DFDEEFFSQTSELA-KDFIRKLLVKETRKR 264
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 104 MRQIQSEMLLNKKMR-QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYI------LNDV 156
++ I ++L M+ +I+ EI+ + +RH ++ L + D ++ I L D
Sbjct: 34 LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDY 93
Query: 157 SQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFA 216
R ++ R + +EY H H +I+HR + +I+ FG +
Sbjct: 94 IVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS 150
Query: 217 RAIPDAHTHITTSNVVGTVEYIAPEYLQ-MLTLTEKCDIYF-GALLAGLVMGKLPSD 271
+ D + T+ G+ Y APE + L + D++ G +L ++ +LP D
Sbjct: 151 NIMTDGNFLKTSC---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLL---YILN---DVSQGRRELDWLAR 168
K+ R E + +GQ H N+ L VT+ ++ Y+ N D + + +
Sbjct: 65 KQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI 124
Query: 169 HRIAL--GLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDAHT 224
+ + G++ G++YL M + +HR + ++S FG +R + D
Sbjct: 125 QLVGMLRGISAGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 180
Query: 225 HITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLPSDKFFQHTNE 279
TT + + APE + T D++ +G ++ +V G+ P +++ TN+
Sbjct: 181 AYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP---YWEMTNQ 234
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 179 LEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEYI 238
L+ L H ++IHR +++ FGF I + S +VGT ++
Sbjct: 127 LQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWM 184
Query: 239 APEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
APE + K DI+ G + ++ G+ P
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 40/232 (17%)
Query: 45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKM 104
+ + L + KIG G G V A + +G+++++KK M L K+
Sbjct: 26 DPRSYLDNFIKIGEGSTGIVCIATV-RSSGKLVAVKK----------------MDLRKQQ 68
Query: 105 RQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELD 164
R+ E+L N E+ + +H N+ + D L+++ + +G D
Sbjct: 69 RR---ELLFN--------EVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGALTD 115
Query: 165 WLARHRI------ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+ R+ A+ LA L+ L + H +IHR ++S FGF
Sbjct: 116 IVTHTRMNEEQIAAVCLAV-LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 174
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ + +VGT ++APE + L + DI+ G ++ +V G+ P
Sbjct: 175 V--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 179 LEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEYI 238
L+ L H ++IHR +++ FGF I + S +VGT ++
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWM 183
Query: 239 APEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
APE + K DI+ G + ++ G+ P
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 104 MRQIQSEMLLNKKMR-QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYI------LNDV 156
++ I ++L M+ +I+ EI+ + +RH ++ L + D ++ I L D
Sbjct: 43 LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDY 102
Query: 157 SQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFA 216
R ++ R + +EY H H +I+HR + +I+ FG +
Sbjct: 103 IVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS 159
Query: 217 RAIPDAHTHITTSNVVGTVEYIAPEYLQ-MLTLTEKCDIYF-GALLAGLVMGKLPSD 271
+ D + T+ G+ Y APE + L + D++ G +L ++ +LP D
Sbjct: 160 NIMTDGNFLKTSC---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 104 MRQIQSEMLLNKKMR-QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYI------LNDV 156
++ I ++L M+ +I+ EI+ + +RH ++ L + D ++ I L D
Sbjct: 44 LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDY 103
Query: 157 SQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFA 216
R ++ R + +EY H H +I+HR + +I+ FG +
Sbjct: 104 IVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS 160
Query: 217 RAIPDAHTHITTSNVVGTVEYIAPEYLQ-MLTLTEKCDIYF-GALLAGLVMGKLPSD 271
+ D + T+ G+ Y APE + L + D++ G +L ++ +LP D
Sbjct: 161 NIMTDGNFLKTSC---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 48/236 (20%)
Query: 45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKM 104
+ + L + KIG G G V A + +G+++++KK M L K+
Sbjct: 17 DPRSYLDNFIKIGEGSTGIVCIATV-RSSGKLVAVKK----------------MDLRKQQ 59
Query: 105 RQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELD 164
R+ E+L N E+ + +H N+ + D L+++ + +G D
Sbjct: 60 RR---ELLFN--------EVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGALTD 106
Query: 165 WLARHRI------ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGF--- 215
+ R+ A+ LA L+ L + H +IHR ++S FGF
Sbjct: 107 IVTHTRMNEEQIAAVCLAV-LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 165
Query: 216 -ARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
++ +P +VGT ++APE + L + DI+ G ++ +V G+ P
Sbjct: 166 VSKEVP------RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 174 ---------GLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDA 222
G+A G++YL M + +HR + ++S FG AR + D
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDP 201
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 257
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 104 MRQIQSEMLLNKKMR-QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYI------LNDV 156
++ I ++L M+ +I+ EI+ + +RH ++ L + D ++ I L D
Sbjct: 38 LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDY 97
Query: 157 SQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFA 216
R ++ R + +EY H H +I+HR + +I+ FG +
Sbjct: 98 IVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS 154
Query: 217 RAIPDAHTHITTSNVVGTVEYIAPEYLQ-MLTLTEKCDIYF-GALLAGLVMGKLPSD 271
+ D + T+ G+ Y APE + L + D++ G +L ++ +LP D
Sbjct: 155 NIMTDGNFLKTSC---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 186 HCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM 245
H ++IHR E +I+ FG++ P + + GT++Y+ PE ++
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKTMCGTLDYLPPEMIEG 195
Query: 246 LTLTEKCDIY-FGALLAGLVMGKLP 269
EK D++ G L L++G P
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 48/236 (20%)
Query: 45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKM 104
+ + L + KIG G G V A + +G+++++KK M L K+
Sbjct: 21 DPRSYLDNFIKIGEGSTGIVCIATV-RSSGKLVAVKK----------------MDLRKQQ 63
Query: 105 RQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELD 164
R+ E+L N E+ + +H N+ + D L+++ + +G D
Sbjct: 64 RR---ELLFN--------EVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGALTD 110
Query: 165 WLARHRI------ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGF--- 215
+ R+ A+ LA L+ L + H +IHR ++S FGF
Sbjct: 111 IVTHTRMNEEQIAAVCLAV-LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 169
Query: 216 -ARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
++ +P +VGT ++APE + L + DI+ G ++ +V G+ P
Sbjct: 170 VSKEVP------RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 209 RISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGK 267
RI FGFA+ + + + T T ++APE L+ E CDI+ G LL ++ G
Sbjct: 165 RICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 268 LP 269
P
Sbjct: 223 TP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 40/232 (17%)
Query: 45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKM 104
+ + L + KIG G G V A + +G+++++KK M L K+
Sbjct: 28 DPRSYLDNFIKIGEGSTGIVCIATV-RSSGKLVAVKK----------------MDLRKQQ 70
Query: 105 RQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELD 164
R+ E+L N E+ + +H N+ + D L+++ + +G D
Sbjct: 71 RR---ELLFN--------EVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGALTD 117
Query: 165 WLARHRI------ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+ R+ A+ LA L+ L + H +IHR ++S FGF
Sbjct: 118 IVTHTRMNEEQIAAVCLAV-LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 176
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ + +VGT ++APE + L + DI+ G ++ +V G+ P
Sbjct: 177 V--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 209 RISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGK 267
RI FGFA+ + + + T T ++APE L+ E CDI+ G LL ++ G
Sbjct: 165 RICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 268 LP 269
P
Sbjct: 223 TP 224
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 11/110 (10%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFAR-AIPDAHTHITTSNVVG 233
+ LEYLH +++R +I+ FG + I D T T G
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCG 167
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
T EY+APE L+ D + G ++ ++ G+LP F+ +E F
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLF 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 25/110 (22%)
Query: 209 RISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGK 267
++ FG A I D + N+ GT E++APE + L + D++ G + L+ G
Sbjct: 159 KLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 215
Query: 268 LP--------------------SDKFFQHTNEMSFVKWMRNVMASENPKR 297
P ++FF T+E++ ++R ++ E KR
Sbjct: 216 SPFLGDTKQETLANITAVSYDFDEEFFSQTSELA-KDFIRKLLVKETRKR 264
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTHIT 227
+A +ACG +YL +H IHR A+I FG A+ I A +
Sbjct: 146 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRK 202
Query: 228 TSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV-MGKLP 269
+ V+++ PE T K D + FG LL + +G +P
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 11/110 (10%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFAR-AIPDAHTHITTSNVVG 233
+ LEYLH +++R +I+ FG + I D T T G
Sbjct: 117 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCG 170
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
T EY+APE L+ D + G ++ ++ G+LP F+ +E F
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLF 217
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 21/178 (11%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 174 ---------GLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDAH 223
G+A G++YL +HR + ++S FG +R + D
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 224 THITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 257
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 20/164 (12%)
Query: 119 QIQSEINTVGQIRHRN---LHPLLAHVTRPDCHLLYILNDVSQGR-----RELDWLARHR 170
+I+ E+N + +IRH N LH + + T ++ IL VS G E + L
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKT----DVVLILELVSGGELFDFLAEKESLTEDE 116
Query: 171 IALGLACGLEYLHMHHCPRIIH----RXXXXXXXXXXXXIEARISGFGFARAIPDAHTHI 226
L L+ +H H RI H ++ FG A I +
Sbjct: 117 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF- 175
Query: 227 TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
N+ GT E++APE + L + D++ G + L+ G P
Sbjct: 176 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 40/222 (18%)
Query: 55 KIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN 114
KIG G G V A + +G+++++KK M L K+ R+ E+L N
Sbjct: 158 KIGEGSTGIVCIATV-RSSGKLVAVKK----------------MDLRKQQRR---ELLFN 197
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRI--- 171
E+ + +H N+ + D L+++ + +G D + R+
Sbjct: 198 --------EVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGALTDIVTHTRMNEE 247
Query: 172 ---ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITT 228
A+ LA L+ L + H +IHR ++S FGF + +
Sbjct: 248 QIAAVCLAV-LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRR 304
Query: 229 SNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+VGT ++APE + L + DI+ G ++ +V G+ P
Sbjct: 305 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 20/164 (12%)
Query: 119 QIQSEINTVGQIRHRN---LHPLLAHVTRPDCHLLYILNDVSQGR-----RELDWLARHR 170
+I+ E+N + +IRH N LH + + T ++ IL VS G E + L
Sbjct: 54 EIEREVNILREIRHPNIITLHDIFENKT----DVVLILELVSGGELFDFLAEKESLTEDE 109
Query: 171 IALGLACGLEYLHMHHCPRIIH----RXXXXXXXXXXXXIEARISGFGFARAIPDAHTHI 226
L L+ +H H RI H ++ FG A I +
Sbjct: 110 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF- 168
Query: 227 TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
N+ GT E++APE + L + D++ G + L+ G P
Sbjct: 169 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 25/130 (19%)
Query: 163 LDWLARHRIALG----------LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISG 212
LD + +HR ALG +A G+ YL H ++HR + +++
Sbjct: 102 LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVAD 158
Query: 213 FGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-----------FGA-LL 260
FG A +P + S ++++A E + T + D++ FGA
Sbjct: 159 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218
Query: 261 AGLVMGKLPS 270
AGL + ++P
Sbjct: 219 AGLRLAEVPD 228
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 11/110 (10%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFAR-AIPDAHTHITTSNVVG 233
+ LEYLH +++R +I+ FG + I D T T G
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCG 167
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
T EY+APE L+ D + G ++ ++ G+LP F+ +E F
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLF 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 19/166 (11%)
Query: 117 MRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH-RIA--- 172
++++ E+ + + H N+ L + LY++ + + G D+L H R+
Sbjct: 55 LQKLFREVRIMKILNHPNIVKLFEVIETEKT--LYLIMEYASGGEVFDYLVAHGRMKEKE 112
Query: 173 -----LGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT 227
+ ++Y H RI+HR + +I+ FGF+ T
Sbjct: 113 ARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT 169
Query: 228 TSNVVGTVEYIAPEYLQMLTLT-EKCDIY-FGALLAGLVMGKLPSD 271
G+ Y APE Q + D++ G +L LV G LP D
Sbjct: 170 ---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 20/164 (12%)
Query: 119 QIQSEINTVGQIRHRN---LHPLLAHVTRPDCHLLYILNDVSQGR-----RELDWLARHR 170
+I+ E+N + +IRH N LH + + T ++ IL VS G E + L
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKT----DVVLILELVSGGELFDFLAEKESLTEDE 130
Query: 171 IALGLACGLEYLHMHHCPRIIH----RXXXXXXXXXXXXIEARISGFGFARAIPDAHTHI 226
L L+ +H H RI H ++ FG A I +
Sbjct: 131 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF- 189
Query: 227 TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
N+ GT E++APE + L + D++ G + L+ G P
Sbjct: 190 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFAR-AIPDAHTHITTSNVVG 233
+ L+YLH +++R +I+ FG + I D T T G
Sbjct: 260 IVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCG 314
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
T EY+APE L+ D + G ++ ++ G+LP F+ +E F
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLF 361
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 76 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFT 133
Query: 174 ---------GLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDA 222
G+A G++YL M + +HR + ++S FG +R + D
Sbjct: 134 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 189
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 190 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 245
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 40/232 (17%)
Query: 45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKM 104
+ + L + KIG G G V A + +G+++++KK M L K+
Sbjct: 71 DPRSYLDNFIKIGEGSTGIVCIATV-RSSGKLVAVKK----------------MDLRKQQ 113
Query: 105 RQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELD 164
R+ E+L N E+ + +H N+ + D L+++ + +G D
Sbjct: 114 RR---ELLFN--------EVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGALTD 160
Query: 165 WLARHRI------ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA 218
+ R+ A+ LA L+ L + H +IHR ++S FGF
Sbjct: 161 IVTHTRMNEEQIAAVCLAV-LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 219
Query: 219 IPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+ + +VGT ++APE + L + DI+ G ++ +V G+ P
Sbjct: 220 V--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 21/178 (11%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 174 ---------GLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDAH 223
G+A G++YL +HR + ++S FG +R + D
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 224 THITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 257
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFAR-AIPDAHTHITTSNVVG 233
+ L+YLH +++R +I+ FG + I D T T G
Sbjct: 257 IVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCG 311
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
T EY+APE L+ D + G ++ ++ G+LP F+ +E F
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLF 358
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFT 116
Query: 174 ---------GLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDA 222
G+A G++YL M + +HR + ++S FG +R + D
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 172
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 173 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 228
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 81/202 (40%), Gaps = 45/202 (22%)
Query: 53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML 112
+EKIG G G VYKA G ++++KKI ++E +
Sbjct: 11 VEKIGEGTYGVVYKAR-NKLTGEVVALKKI---------------------RLDTETEGV 48
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG-RRELDWLARHRI 171
+ +R EI+ + ++ H N+ LL V + L + V Q ++ +D A I
Sbjct: 49 PSTAIR----EISLLKELNHPNIVKLL-DVIHTENKLYLVFEHVDQDLKKFMDASALTGI 103
Query: 172 ALGLA--------CGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARA--IPD 221
L L GL + H H R++HR +++ FG ARA +P
Sbjct: 104 PLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 222 AHTHITTSNVVGTVEYIAPEYL 243
T + V T+ Y APE L
Sbjct: 161 R----TYXHEVVTLWYRAPEIL 178
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
+ +A G+E+L C IHR +I FG AR I ++ +
Sbjct: 205 SFQVARGMEFLSSRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
++++APE + + K D++ +G LL
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLL 291
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFT 116
Query: 174 ---------GLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDA 222
G+A G++YL M + +HR + ++S FG +R + D
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 172
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 173 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 228
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 35/171 (20%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGT 234
+ G++Y+H ++IHR + +I FG ++ + + GT
Sbjct: 145 ITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK---GT 198
Query: 235 VEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM---GKLPSDKFFQHTNEMSFVKWMRNVM 290
+ Y++PE + ++ D+Y G +LA L+ + KFF +R+ +
Sbjct: 199 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTD---------LRDGI 249
Query: 291 ASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLS 341
S+ D K E+ LL ++ + P +RPN+ ++ R L+
Sbjct: 250 ISD----IFDKK-------EKTLLQKLLS-----KKPEDRPNTSEILRTLT 284
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 144 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 248
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFAR-AIPDAHTHITTSNVVG 233
+ LEYLH +++R +I+ FG + I D T G
Sbjct: 119 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCG 172
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
T EY+APE L+ D + G ++ ++ G+LP F+ +E F
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLF 219
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 142 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 246
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 133 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 237
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFAR-AIPDAHTHITTSNVVG 233
+ LEYLH +++R +I+ FG + I D T G
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCG 167
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
T EY+APE L+ D + G ++ ++ G+LP F+ +E F
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLF 214
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 174 ---------GLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDA 222
G+A G++YL M + +HR + ++S FG +R + D
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 257
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 174 ---------GLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDA 222
G+A G++YL M + +HR + ++S FG +R + D
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 257
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 174 ---------GLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDA 222
G+A G++YL M + +HR + ++S FG +R + D
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 257
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 174 ---------GLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDA 222
G+A G++YL M + +HR + ++S FG +R + D
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 257
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFAR-AIPDAHTHITTSNVVG 233
+ LEYLH +++R +I+ FG + I D T G
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCG 167
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
T EY+APE L+ D + G ++ ++ G+LP F+ +E F
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLF 214
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 90/233 (38%), Gaps = 52/233 (22%)
Query: 50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQS 109
LA+ KIG G G V A G+ +++KK M L K+ R+
Sbjct: 47 LANFIKIGEGSTGIVCIAT-EKHTGKQVAVKK----------------MDLRKQQRR--- 86
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH 169
E+L N E+ + H N+ + + D L+++ + +G D +
Sbjct: 87 ELLFN--------EVVIMRDYHHDNVVDMYSSYLVGDE--LWVVMEFLEGGALTDIVTHT 136
Query: 170 R--------IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGF----AR 217
R + L + L YLH +IHR ++S FGF ++
Sbjct: 137 RMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK 193
Query: 218 AIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
+P +VGT ++APE + L + DI+ G ++ ++ G+ P
Sbjct: 194 EVP------KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFAR-AIPDAHTHITTSNVVG 233
+ LEYLH +++R +I+ FG + I D T G
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCG 167
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
T EY+APE L+ D + G ++ ++ G+LP F+ +E F
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLF 214
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 13/127 (10%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A + GLE++H +++R RIS G A H +
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 349
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIYF--GALLAGLVMGKLPSDKFFQH-TNEMSFVKWMRN 288
VGT Y+APE LQ + +F G +L L+ G P F QH T + + M
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTL 406
Query: 289 VMASENP 295
MA E P
Sbjct: 407 TMAVELP 413
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 13/127 (10%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A + GLE++H +++R RIS G A H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIYF--GALLAGLVMGKLPSDKFFQH-TNEMSFVKWMRN 288
VGT Y+APE LQ + +F G +L L+ G P F QH T + + M
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTL 407
Query: 289 VMASENP 295
MA E P
Sbjct: 408 TMAVELP 414
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 174 ---------GLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDA 222
G+A G++YL M + +HR + ++S FG +R + D
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 257
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 12/106 (11%)
Query: 165 WLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHT 224
+LA +ALG H+H II+R +++ FG + H
Sbjct: 126 YLAEISMALG--------HLHQ-KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE--SIHD 174
Query: 225 HITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
T GT+EY+APE L D + GAL+ ++ G P
Sbjct: 175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 13/127 (10%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A + GLE++H +++R RIS G A H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIYF--GALLAGLVMGKLPSDKFFQH-TNEMSFVKWMRN 288
VGT Y+APE LQ + +F G +L L+ G P F QH T + + M
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTL 407
Query: 289 VMASENP 295
MA E P
Sbjct: 408 TMAVELP 414
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 13/127 (10%)
Query: 172 ALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNV 231
A + GLE++H +++R RIS G A H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 232 VGTVEYIAPEYLQMLTLTEKCDIYF--GALLAGLVMGKLPSDKFFQH-TNEMSFVKWMRN 288
VGT Y+APE LQ + +F G +L L+ G P F QH T + + M
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTL 407
Query: 289 VMASENP 295
MA E P
Sbjct: 408 TMAVELP 414
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 11/97 (11%)
Query: 177 CGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEA---RISGFGFARAIPDAHTHITTSNVVG 233
G+ YLH H+ I+HR + +I FG + + +G
Sbjct: 147 SGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK---MKERLG 200
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
T YIAPE L+ EKCD++ G +L L+ G P
Sbjct: 201 TAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 23/179 (12%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 174 ---------GLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDA 222
G+A G++YL M + +HR + ++S FG R + D
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 257
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARHRIAL- 173
K+ R E + +GQ H N+ L VT+ + I+ + + +L +H
Sbjct: 86 KQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFT 143
Query: 174 ---------GLACGLEYL-HMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAI-PDA 222
G+A G++YL M + +HR + ++S FG +R + D
Sbjct: 144 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 199
Query: 223 HTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVM--GKLPSDKFFQHTNE 279
TT + + +PE + T D++ ++ VM G+ P +++ +N+
Sbjct: 200 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ 255
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 89/235 (37%), Gaps = 57/235 (24%)
Query: 53 LEKIGSGGCGEVY--KAELPGQNGRMISIKKI-VGPPMDAAALIEEDSMLLNKKMRQIQS 109
++K+GSG GEV K +L G + IKK V ++ AL++E
Sbjct: 26 VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDE-------------- 71
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG---------R 160
+ + Q+ H N+ L D Y++ +V +G R
Sbjct: 72 --------------VAVLKQLDHPNIMKLYEFF--EDKRNYYLVMEVYRGGELFDEIILR 115
Query: 161 RELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEA---RISGFGFAR 217
++ + I + G YLH H+ I+HR +I FG +
Sbjct: 116 QKFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS- 171
Query: 218 AIPDAHTHI--TTSNVVGTVEYIAPEYLQMLTLTEKCDIYF-GALLAGLVMGKLP 269
AH + +GT YIAPE L+ EKCD++ G +L L+ G P
Sbjct: 172 ----AHFEVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 12/106 (11%)
Query: 165 WLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHT 224
+LA +ALG H+H II+R +++ FG + H
Sbjct: 126 YLAEISMALG--------HLHQ-KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE--SIHD 174
Query: 225 HITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP 269
T GT+EY+APE L D + GAL+ ++ G P
Sbjct: 175 GTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 89/235 (37%), Gaps = 57/235 (24%)
Query: 53 LEKIGSGGCGEVY--KAELPGQNGRMISIKKI-VGPPMDAAALIEEDSMLLNKKMRQIQS 109
++K+GSG GEV K +L G + IKK V ++ AL++E
Sbjct: 9 VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDE-------------- 54
Query: 110 EMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG---------R 160
+ + Q+ H N+ L D Y++ +V +G R
Sbjct: 55 --------------VAVLKQLDHPNIMKLYEFF--EDKRNYYLVMEVYRGGELFDEIILR 98
Query: 161 RELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEA---RISGFGFAR 217
++ + I + G YLH H+ I+HR +I FG +
Sbjct: 99 QKFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS- 154
Query: 218 AIPDAHTHI--TTSNVVGTVEYIAPEYLQMLTLTEKCDIYF-GALLAGLVMGKLP 269
AH + +GT YIAPE L+ EKCD++ G +L L+ G P
Sbjct: 155 ----AHFEVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 70/174 (40%), Gaps = 20/174 (11%)
Query: 171 IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSN 230
IA +A G+ YL + +HR + +I+ FG +R I A + N
Sbjct: 179 IARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGN 235
Query: 231 VVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNV 289
+ ++ PE + T + D++ +G +L + L H + +V+ +
Sbjct: 236 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL 295
Query: 290 MASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQI 343
EN C ++ ++++ C+ L P +RP+ + R+L ++
Sbjct: 296 ACPEN-------------CPLELYNLMRL-CWSKL--PADRPSFCSIHRILQRM 333
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H + V T
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 16/118 (13%)
Query: 209 RISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ-----MLTLTEKCDIY-FGALLAG 262
R++ FG + D T + +S VGT +YI+PE LQ M +CD + G +
Sbjct: 231 RLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 289
Query: 263 LVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIAC 320
++ G+ P F+ + ++ K M + + P D EE L+ ++ C
Sbjct: 290 MLYGETP---FYAESLVETYGKIMNHEERFQFPSHVTDVS------EEAKDLIQRLIC 338
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 63/166 (37%), Gaps = 19/166 (11%)
Query: 117 MRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH-RIA--- 172
++++ E+ + + H N+ L + LY++ + + G D+L H R+
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFEVIETEKT--LYLIMEYASGGEVFDYLVAHGRMKEKE 115
Query: 173 -----LGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT 227
+ ++Y H RI+HR + +I+ FGF+
Sbjct: 116 ARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---K 169
Query: 228 TSNVVGTVEYIAPEYLQMLTLT-EKCDIY-FGALLAGLVMGKLPSD 271
G Y APE Q + D++ G +L LV G LP D
Sbjct: 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 16/118 (13%)
Query: 209 RISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ-----MLTLTEKCDIY-FGALLAG 262
R++ FG + D T + +S VGT +YI+PE LQ M +CD + G +
Sbjct: 215 RLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 273
Query: 263 LVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIAC 320
++ G+ P F+ + ++ K M + + P D EE L+ ++ C
Sbjct: 274 MLYGETP---FYAESLVETYGKIMNHEERFQFPSHVTDVS------EEAKDLIQRLIC 322
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H V T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 8/108 (7%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHIT-TSNVVGTVE 236
GL+Y+H ++HR + +I FG AR H H V T
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 237 YIAPE-YLQMLTLTEKCDIY-FGALLAGLVMGK--LPSDKFFQHTNEM 280
Y APE L T+ DI+ G +LA ++ + P + N +
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFAR-AIPDAHTHITTSNVVG 233
+ L+YLH +++R +I+ FG + I D T G
Sbjct: 119 IVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCG 173
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
T EY+APE L+ D + G ++ ++ G+LP F+ +E F
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLF 220
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFAR-AIPDAHTHITTSNVVG 233
+ L+YLH +++R +I+ FG + I D T G
Sbjct: 117 IVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCG 171
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
T EY+APE L+ D + G ++ ++ G+LP F+ +E F
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLF 218
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFAR-AIPDAHTHITTSNVVG 233
+ L+YLH +++R +I+ FG + I D T G
Sbjct: 118 IVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCG 172
Query: 234 TVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSF 282
T EY+APE L+ D + G ++ ++ G+LP F+ +E F
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHEKLF 219
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 92/236 (38%), Gaps = 16/236 (6%)
Query: 29 AIFSPLIKKAKDLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIK-KIVGPPM 87
I L +K +D+ E++ L + +G G G V +A+L ++G + + K++ +
Sbjct: 6 GISDELKEKLEDVLIPEQQFTLGRM--LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADI 63
Query: 88 DAAALIEE--DSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRP 145
A++ IEE K+ L+ +R + + + P + H
Sbjct: 64 IASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMV----ILPFMKH---G 116
Query: 146 DCHLLYILNDVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXX 205
D H + + + + L R + +ACG+EYL + IHR
Sbjct: 117 DLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAED 173
Query: 206 IEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL 260
+ ++ FG +R I + V+++A E L T D++ FG +
Sbjct: 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTM 229
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
G+ YLH ++ + + + +I FG +R I A ++GT EY
Sbjct: 143 GVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA---CELREIMGTPEY 199
Query: 238 IAPEYLQMLTLTEKCDIYFGALLAGLVMGKLPSDKFFQHTNEMSFVKWMR-NVMASENPK 296
+APE L +T D++ ++A +++ + F N+ +++ + NV SE
Sbjct: 200 LAPEILNYDPITTATDMWNIGIIAYMLLTH--TSPFVGEDNQETYLNISQVNVDYSEETF 257
Query: 297 RAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSK 334
++ S+L + Q LLV ++P +RP ++
Sbjct: 258 SSV-SQLATDFI--QSLLV---------KNPEKRPTAE 283
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 30/173 (17%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG---FARAIPDAHTHITTSNVVGT 234
GLEYLH + IHR +I+ FG F D + VGT
Sbjct: 128 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 235 VEYIAPEYLQMLTLTE-KCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMAS 292
++APE ++ + + K DI+ FG L G P K+ M+ +M +
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP----------MKVLMLT 234
Query: 293 -ENPKRAIDSKLVGNGCEEQMLL------VLKIACFCTLEDPNERPNSKDVRR 338
+N ++++ G +++ +L K+ C +DP +RP + ++ R
Sbjct: 235 LQNDPPSLET-----GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 30/173 (17%)
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG---FARAIPDAHTHITTSNVVGT 234
GLEYLH + IHR +I+ FG F D + VGT
Sbjct: 133 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 235 VEYIAPEYLQMLTLTE-KCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMAS 292
++APE ++ + + K DI+ FG L G P K+ M+ +M +
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP----------MKVLMLT 239
Query: 293 -ENPKRAIDSKLVGNGCEEQMLL------VLKIACFCTLEDPNERPNSKDVRR 338
+N ++++ G +++ +L K+ C +DP +RP + ++ R
Sbjct: 240 LQNDPPSLET-----GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 32/211 (15%)
Query: 43 FLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIV------GPPMDAAALIEED 96
F ++ L KIG G GEV+KA + G+ +++KK++ G P+ A I+
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREIKIL 71
Query: 97 SMLLNKKMRQIQSEMLLNKK--MRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILN 154
+L ++ + + E+ K + ++ I V +L LL++V + + L+
Sbjct: 72 QLLKHENVVNL-IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL-----VKFTLS 125
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
++ R+ L GL Y+H + +I+HR +++ FG
Sbjct: 126 EIK------------RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 170
Query: 215 FARAIPDAHTHITT--SNVVGTVEYIAPEYL 243
ARA A N V T+ Y PE L
Sbjct: 171 LARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 74/191 (38%), Gaps = 14/191 (7%)
Query: 113 LNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR-----ELDWLA 167
L K I++EI + +I+H N+ L P+ HL ++ VS G E +
Sbjct: 60 LKGKESSIENEIAVLRKIKHENIVALEDIYESPN-HLYLVMQLVSGGELFDRIVEKGFYT 118
Query: 168 RHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEAR---ISGFGFARAIPDAHT 224
+ + L+ ++ H I+HR E IS FG ++
Sbjct: 119 EKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV 178
Query: 225 HITTSNVVGTVEYIAPEYLQMLTLTEKCDIYFGALLAGLVMGKLPSDKFFQHTNEMSFVK 284
S GT Y+APE L ++ D + ++A +++ P F+ + F +
Sbjct: 179 ---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP--FYDENDSKLFEQ 233
Query: 285 WMRNVMASENP 295
++ ++P
Sbjct: 234 ILKAEYEFDSP 244
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 21/186 (11%)
Query: 102 KKMRQIQSEMLLNKKMRQIQSEINTVGQIRH----RNLHPLLAHV---TRPDCHLLYILN 154
KK +I + ++ K++ +I+ V +H + HP L + + + L +++
Sbjct: 74 KKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 133
Query: 155 DVSQG--------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXI 206
V+ G +R+L + ++ L YLH II+R
Sbjct: 134 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEG 190
Query: 207 EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM 265
+++ +G + TTS GT YIAPE L+ D + G L+ ++
Sbjct: 191 HIKLTDYGMCKE--GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 248
Query: 266 GKLPSD 271
G+ P D
Sbjct: 249 GRSPFD 254
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 26 PGPAIFSPLIKKAKDLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIV 83
P P F L K+L L + +L KI GE++K E PG+ R IS +++V
Sbjct: 7 PQPKTFGEL----KNLPLLNTDKPVQALMKIADE-LGEIFKFEAPGRVTRYISSQRLV 59
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 21/186 (11%)
Query: 102 KKMRQIQSEMLLNKKMRQIQSEINTVGQIRH----RNLHPLLAHV---TRPDCHLLYILN 154
KK +I + ++ K++ +I+ V +H + HP L + + + L +++
Sbjct: 42 KKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 101
Query: 155 DVSQG--------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXI 206
V+ G +R+L + ++ L YLH II+R
Sbjct: 102 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEG 158
Query: 207 EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM 265
+++ +G + TTS GT YIAPE L+ D + G L+ ++
Sbjct: 159 HIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 216
Query: 266 GKLPSD 271
G+ P D
Sbjct: 217 GRSPFD 222
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 21/186 (11%)
Query: 102 KKMRQIQSEMLLNKKMRQIQSEINTVGQIRH----RNLHPLLAHV---TRPDCHLLYILN 154
KK +I + ++ K++ +I+ V +H + HP L + + + L +++
Sbjct: 31 KKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 90
Query: 155 DVSQG--------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXI 206
V+ G +R+L + ++ L YLH II+R
Sbjct: 91 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEG 147
Query: 207 EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM 265
+++ +G + TTS GT YIAPE L+ D + G L+ ++
Sbjct: 148 HIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 205
Query: 266 GKLPSD 271
G+ P D
Sbjct: 206 GRSPFD 211
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 32/211 (15%)
Query: 43 FLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIV------GPPMDAAALIEED 96
F ++ L KIG G GEV+KA + G+ +++KK++ G P+ A I+
Sbjct: 12 FCDEVSKYEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREIKIL 70
Query: 97 SMLLNKKMRQIQSEMLLNKK--MRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILN 154
+L ++ + + E+ K + + I V +L LL++V + + L+
Sbjct: 71 QLLKHENVVNL-IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFTLS 124
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
++ R+ L GL Y+H + +I+HR +++ FG
Sbjct: 125 EIK------------RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169
Query: 215 FARAIPDAHTHITT--SNVVGTVEYIAPEYL 243
ARA A N V T+ Y PE L
Sbjct: 170 LARAFSLAKNSQPNRYXNRVVTLWYRPPELL 200
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 15/85 (17%)
Query: 209 RISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEK-----------CDIY-F 256
++ FG A + T + + VGTV Y+ PE ++ ++ + + D++
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 257 GALLAGLVMGKLPSDKFFQHTNEMS 281
G +L + GK P F Q N++S
Sbjct: 254 GCILYYMTYGKTP---FQQIINQIS 275
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 21/186 (11%)
Query: 102 KKMRQIQSEMLLNKKMRQIQSEINTVGQIRH----RNLHPLLAHV---TRPDCHLLYILN 154
KK +I + ++ K++ +I+ V +H + HP L + + + L +++
Sbjct: 27 KKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 86
Query: 155 DVSQG--------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXI 206
V+ G +R+L + ++ L YLH II+R
Sbjct: 87 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEG 143
Query: 207 EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM 265
+++ +G + TTS GT YIAPE L+ D + G L+ ++
Sbjct: 144 HIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 201
Query: 266 GKLPSD 271
G+ P D
Sbjct: 202 GRSPFD 207
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 15/85 (17%)
Query: 209 RISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEK-----------CDIY-F 256
++ FG A + T + + VGTV Y+ PE ++ ++ + + D++
Sbjct: 150 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 209
Query: 257 GALLAGLVMGKLPSDKFFQHTNEMS 281
G +L + GK P F Q N++S
Sbjct: 210 GCILYYMTYGKTP---FQQIINQIS 231
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 32/211 (15%)
Query: 43 FLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIV------GPPMDAAALIEED 96
F ++ L KIG G GEV+KA + G+ +++KK++ G P+ A I+
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREIKIL 71
Query: 97 SMLLNKKMRQIQSEMLLNKK--MRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILN 154
+L ++ + + E+ K + + I V +L LL++V + + L+
Sbjct: 72 QLLKHENVVNL-IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFTLS 125
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
++ R+ L GL Y+H + +I+HR +++ FG
Sbjct: 126 EIK------------RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 170
Query: 215 FARAIPDAHTHITT--SNVVGTVEYIAPEYL 243
ARA A N V T+ Y PE L
Sbjct: 171 LARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 15/85 (17%)
Query: 209 RISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEK-----------CDIY-F 256
++ FG A + T + + VGTV Y+ PE ++ ++ + + D++
Sbjct: 146 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 205
Query: 257 GALLAGLVMGKLPSDKFFQHTNEMS 281
G +L + GK P F Q N++S
Sbjct: 206 GCILYYMTYGKTP---FQQIINQIS 227
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 15/85 (17%)
Query: 209 RISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEK-----------CDIY-F 256
++ FG A + T + + VGTV Y+ PE ++ ++ + + D++
Sbjct: 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206
Query: 257 GALLAGLVMGKLPSDKFFQHTNEMS 281
G +L + GK P F Q N++S
Sbjct: 207 GCILYYMTYGKTP---FQQIINQIS 228
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 15/85 (17%)
Query: 209 RISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEK-----------CDIY-F 256
++ FG A + T + + VGTV Y+ PE ++ ++ + + D++
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 257 GALLAGLVMGKLPSDKFFQHTNEMS 281
G +L + GK P F Q N++S
Sbjct: 254 GCILYYMTYGKTP---FQQIINQIS 275
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 15/85 (17%)
Query: 209 RISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEK-----------CDIY-F 256
++ FG A + T + + VGTV Y+ PE ++ ++ + + D++
Sbjct: 166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 257 GALLAGLVMGKLPSDKFFQHTNEMS 281
G +L + GK P F Q N++S
Sbjct: 226 GCILYYMTYGKTP---FQQIINQIS 247
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 32/211 (15%)
Query: 43 FLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIV------GPPMDAAALIEED 96
F ++ L KIG G GEV+KA + G+ +++KK++ G P+ A I+
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREIKIL 71
Query: 97 SMLLNKKMRQIQSEMLLNKK--MRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILN 154
+L ++ + + E+ K + + I V +L LL++V + + L+
Sbjct: 72 QLLKHENVVNL-IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFTLS 125
Query: 155 DVSQGRRELDWLARHRIALGLACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFG 214
++ R+ L GL Y+H + +I+HR +++ FG
Sbjct: 126 EIK------------RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 170
Query: 215 FARAIPDAHTHITT--SNVVGTVEYIAPEYL 243
ARA A N V T+ Y PE L
Sbjct: 171 LARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 179 LEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEYI 238
LE L+ H RIIHR + R++ FG + + T + +GT ++
Sbjct: 119 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWM 176
Query: 239 APEYLQMLTLTE-----KCDIY 255
APE + T+ + K DI+
Sbjct: 177 APEVVMCETMKDTPYDYKADIW 198
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 179 LEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEYI 238
LE L+ H RIIHR + R++ FG + + T + +GT ++
Sbjct: 127 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWM 184
Query: 239 APEYLQMLTLTE-----KCDIY 255
APE + T+ + K DI+
Sbjct: 185 APEVVMCETMKDTPYDYKADIW 206
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 209 RISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT-----LTEKCDIY-FGALLAG 262
R++ FG + + T + +S VGT +YI+PE LQ + +CD + G +
Sbjct: 215 RLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273
Query: 263 LVMGKLP---------SDKFFQHTNEMSFVKWMRNVMASENPKRAI-------DSKLVGN 306
++ G+ P K H F + +V SEN K I + +L N
Sbjct: 274 MLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDV--SENAKDLIRRLICSREHRLGQN 331
Query: 307 GCEE 310
G E+
Sbjct: 332 GIED 335
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 208 ARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY 255
A + FG A A D N VGT+ Y APE T + DIY
Sbjct: 173 AYLVDFGIASATTDEKL-TQLGNTVGTLYYXAPERFSESHATYRADIY 219
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 19/163 (11%)
Query: 123 EINTVGQIRHRNLHPLLAHVTRPDC----HLLYILNDVSQGRR----ELDWLARHRIALG 174
EI + +H N+ + ++ RPD + +YI+ ++ Q L+ I
Sbjct: 59 EIKILKHFKHENIITIF-NIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPD--AHTHITTSNVV 232
+ L + + H +IHR + ++ FG AR I + A T
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 233 GTVEYIAPEYLQ----MLT---LTEKCDIYF-GALLAGLVMGK 267
G VE++A + + MLT + D++ G +LA L + +
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 86/216 (39%), Gaps = 39/216 (18%)
Query: 102 KKMRQIQSEMLLNKKMRQIQS--EINTVGQIRHRN--LHPLLAHVTRPDCHLLYILNDVS 157
K++R E+ K MR++++ ++ G +R+ N L +P +Y+ +
Sbjct: 36 KRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQ 95
Query: 158 QGRRE--LDWL-------ARHR-----IALGLACGLEYLHMHHCPRIIHRXXXXXXXXXX 203
R+E DW+ R R I L +A +E+LH ++HR
Sbjct: 96 LCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFT 152
Query: 204 XXIEARISGFGFARAIPDAHTHITT----------SNVVGTVEYIAPEYLQMLTLTEKCD 253
++ FG A+ T + VGT Y++PE + + + K D
Sbjct: 153 MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVD 212
Query: 254 IYFGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNV 289
I+ GL++ +L + + +M V+ + +V
Sbjct: 213 IF----SLGLILFEL----LYPFSTQMERVRTLTDV 240
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 19/163 (11%)
Query: 123 EINTVGQIRHRNLHPLLAHVTRPDC----HLLYILNDVSQGRR----ELDWLARHRIALG 174
EI + +H N+ + ++ RPD + +YI+ ++ Q L+ I
Sbjct: 59 EIKILKHFKHENIITIF-NIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 175 LACGLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPD--AHTHITTSNVV 232
+ L + + H +IHR + ++ FG AR I + A T
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 233 GTVEYIAPEYLQ----MLT---LTEKCDIYF-GALLAGLVMGK 267
G EY+A + + MLT + D++ G +LA L + +
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 74/198 (37%), Gaps = 37/198 (18%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+GSG CGEV K + + ++IK I + E D L +++E+ + K
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL------NVETEIEILK 70
Query: 116 KMRQIQSEINTVGQIRHRNLHPLLAHVTR-PDCHLLYILNDVSQGRRELDWLARHRIALG 174
K+ HP + + D YI+ ++ +G D + ++
Sbjct: 71 KLN-----------------HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKE 113
Query: 175 LACGLEYLHM------HHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTH 225
C L + M H IIHR E +I+ FG ++ + +
Sbjct: 114 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 226 ITTSNVVGTVEYIAPEYL 243
T + GT Y+APE L
Sbjct: 174 RT---LCGTPTYLAPEVL 188
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 74/198 (37%), Gaps = 37/198 (18%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+GSG CGEV K + + ++IK I + E D L +++E+ + K
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL------NVETEIEILK 70
Query: 116 KMRQIQSEINTVGQIRHRNLHPLLAHVTR-PDCHLLYILNDVSQGRRELDWLARHRIALG 174
K+ HP + + D YI+ ++ +G D + ++
Sbjct: 71 KLN-----------------HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKE 113
Query: 175 LACGLEYLHM------HHCPRIIHRXXXXXXXXXXXXIEA---RISGFGFARAIPDAHTH 225
C L + M H IIHR E +I+ FG ++ + +
Sbjct: 114 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 226 ITTSNVVGTVEYIAPEYL 243
T + GT Y+APE L
Sbjct: 174 RT---LCGTPTYLAPEVL 188
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 74/198 (37%), Gaps = 37/198 (18%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+GSG CGEV K + + ++IK I + E D L +++E+ + K
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL------NVETEIEILK 70
Query: 116 KMRQIQSEINTVGQIRHRNLHPLLAHVTR-PDCHLLYILNDVSQGRRELDWLARHRIALG 174
K+ HP + + D YI+ ++ +G D + ++
Sbjct: 71 KLN-----------------HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKE 113
Query: 175 LACGLEYLHM------HHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTH 225
C L + M H IIHR E +I+ FG ++ + +
Sbjct: 114 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 226 ITTSNVVGTVEYIAPEYL 243
T + GT Y+APE L
Sbjct: 174 RT---LCGTPTYLAPEVL 188
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 74/198 (37%), Gaps = 37/198 (18%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+GSG CGEV K + + ++IK I + E D L +++E+ + K
Sbjct: 17 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL------NVETEIEILK 69
Query: 116 KMRQIQSEINTVGQIRHRNLHPLLAHVTR-PDCHLLYILNDVSQGRRELDWLARHRIALG 174
K+ HP + + D YI+ ++ +G D + ++
Sbjct: 70 KLN-----------------HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKE 112
Query: 175 LACGLEYLHM------HHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTH 225
C L + M H IIHR E +I+ FG ++ + +
Sbjct: 113 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 172
Query: 226 ITTSNVVGTVEYIAPEYL 243
T + GT Y+APE L
Sbjct: 173 RT---LCGTPTYLAPEVL 187
>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid
Transaminase From Mycobacterium Tuberculosis
Length = 368
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 41/90 (45%)
Query: 43 FLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNK 102
++E+ GG+ +GSGG + EL G I+ ++ +DA +EE + +++
Sbjct: 237 YIEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGITRDSLLQLAIDAGFAVEERRIDIDE 296
Query: 103 KMRQIQSEMLLNKKMRQIQSEINTVGQIRH 132
++ + + + I V ++RH
Sbjct: 297 WQKKAAAGEITEVFACGTAAVITPVARVRH 326
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/198 (18%), Positives = 75/198 (37%), Gaps = 30/198 (15%)
Query: 75 RMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIRHRN 134
+ + ++KI A L++ +++I + +K+ + + E+ + ++H N
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 135 LHPLLAHVTRPDCHLLYILNDVSQG-----------------RRELDWLARHRIALGLAC 177
+ + + + LYI+ D +G + LDW + +AL
Sbjct: 85 I--VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK--- 139
Query: 178 GLEYLHMHHCPRIIHRXXXXXXXXXXXXIEARISGFGFARAIPDAHTHITTSNVVGTVEY 237
H+H +I+HR ++ FG AR + T +GT Y
Sbjct: 140 -----HVHD-RKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYY 191
Query: 238 IAPEYLQMLTLTEKCDIY 255
++PE + K DI+
Sbjct: 192 LSPEICENKPYNNKSDIW 209
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 27.7 bits (60), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 74/198 (37%), Gaps = 37/198 (18%)
Query: 56 IGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK 115
+GSG CGEV K + + ++IK I + E D L +++E+ + K
Sbjct: 24 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL------NVETEIEILK 76
Query: 116 KMRQIQSEINTVGQIRHRNLHPLLAHVTR-PDCHLLYILNDVSQGRRELDWLARHRIALG 174
K+ HP + + D YI+ ++ +G D + ++
Sbjct: 77 KLN-----------------HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKE 119
Query: 175 LACGLEYLHM------HHCPRIIHRXXXXXXXXXXXXIE---ARISGFGFARAIPDAHTH 225
C L + M H IIHR E +I+ FG ++ + +
Sbjct: 120 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 179
Query: 226 ITTSNVVGTVEYIAPEYL 243
T + GT Y+APE L
Sbjct: 180 RT---LCGTPTYLAPEVL 194
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,757,664
Number of Sequences: 62578
Number of extensions: 375753
Number of successful extensions: 1840
Number of sequences better than 100.0: 491
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 453
Number of HSP's that attempted gapping in prelim test: 1676
Number of HSP's gapped (non-prelim): 559
length of query: 345
length of database: 14,973,337
effective HSP length: 100
effective length of query: 245
effective length of database: 8,715,537
effective search space: 2135306565
effective search space used: 2135306565
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)