Query         046907
Match_columns 345
No_of_seqs    168 out of 2301
Neff          9.8 
Searched_HMMs 29240
Date          Mon Mar 25 09:36:26 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046907.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046907hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3omv_A RAF proto-oncogene seri 100.0 2.5E-56 8.4E-61  398.0  20.1  262   37-345    25-300 (307)
  2 4asz_A BDNF/NT-3 growth factor 100.0 5.6E-56 1.9E-60  395.4  18.3  251   45-344    10-288 (299)
  3 4aoj_A High affinity nerve gro 100.0 2.1E-55   7E-60  397.0  21.6  251   45-344    38-318 (329)
  4 4gt4_A Tyrosine-protein kinase 100.0 1.2E-55   4E-60  395.0  17.9  251   45-343    23-304 (308)
  5 4b9d_A Serine/threonine-protei 100.0   1E-53 3.5E-58  386.5  18.8  242   47-338    23-276 (350)
  6 4ase_A Vascular endothelial gr 100.0 1.2E-53   4E-58  388.6  19.0  256   42-343    58-345 (353)
  7 4fih_A Serine/threonine-protei 100.0 3.9E-53 1.3E-57  382.1  19.3  241   48-338    74-323 (346)
  8 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.3E-53 1.8E-57  375.8  18.4  243   47-337    31-283 (311)
  9 3fpq_A Serine/threonine-protei 100.0 1.6E-52 5.5E-57  370.7  20.9  244   48-338    25-282 (290)
 10 4g3f_A NF-kappa-beta-inducing  100.0 1.2E-52 3.9E-57  377.9  16.2  248   43-343    53-314 (336)
 11 3hmm_A TGF-beta receptor type- 100.0 3.8E-52 1.3E-56  372.6  19.0  263   48-344     3-296 (303)
 12 3hyh_A Carbon catabolite-derep 100.0 1.4E-51 4.7E-56  361.8  22.1  240   48-338    13-262 (275)
 13 4fie_A Serine/threonine-protei 100.0 5.9E-52   2E-56  383.3  20.4  242   47-338   150-400 (423)
 14 3ubd_A Ribosomal protein S6 ki 100.0 2.1E-51 7.3E-56  365.3  14.7  243   46-338    22-281 (304)
 15 4g31_A Eukaryotic translation  100.0 1.4E-50 4.8E-55  361.1  17.3  242   48-338     5-279 (299)
 16 4b99_A Mitogen-activated prote 100.0 6.9E-49 2.4E-53  363.0  20.3  258   48-338    54-344 (398)
 17 4f9c_A Cell division cycle 7-r 100.0 1.7E-47 5.9E-52  349.9  20.1  255   47-338    20-352 (361)
 18 3uto_A Twitchin; kinase, muscl 100.0 5.3E-46 1.8E-50  359.4  20.6  241   48-338   157-410 (573)
 19 3v5w_A G-protein coupled recep 100.0 6.2E-46 2.1E-50  358.2  19.3  246   47-338   188-449 (689)
 20 2qkw_B Protein kinase; three-h 100.0 2.6E-44 8.8E-49  325.1  25.5  266   44-344    35-314 (321)
 21 3soc_A Activin receptor type-2 100.0   5E-45 1.7E-49  330.0  17.6  270   37-344    13-317 (322)
 22 3uim_A Brassinosteroid insensi 100.0 1.2E-44   4E-49  327.9  20.0  275   35-343    17-309 (326)
 23 2psq_A Fibroblast growth facto 100.0 7.3E-44 2.5E-48  328.3  22.0  253   44-344    77-363 (370)
 24 3p86_A Serine/threonine-protei 100.0 7.9E-44 2.7E-48  320.3  21.2  253   43-344    32-297 (309)
 25 3cbl_A C-FES, proto-oncogene t 100.0 2.7E-44 9.3E-49  332.1  18.5  254   42-344   108-373 (377)
 26 3lb7_A RAF proto-oncogene seri 100.0   2E-43 6.9E-48  317.3  22.2  267   31-344    19-299 (307)
 27 3vhe_A Vascular endothelial gr 100.0 1.9E-43 6.3E-48  324.2  20.3  260   39-344    13-354 (359)
 28 3s95_A LIMK-1, LIM domain kina 100.0 6.4E-43 2.2E-47  314.3  23.4  249   46-344     8-281 (310)
 29 3fxz_A Serine/threonine-protei 100.0 6.8E-43 2.3E-47  312.4  22.6  243   46-338    18-269 (297)
 30 4euu_A Serine/threonine-protei 100.0 1.9E-42 6.6E-47  312.5  24.2  265   46-343     7-307 (319)
 31 3fe3_A MAP/microtubule affinit 100.0 8.4E-43 2.9E-47  316.0  21.9  241   46-338    13-264 (328)
 32 3ugc_A Tyrosine-protein kinase 100.0 2.8E-43 9.7E-48  314.4  18.1  259   46-344     8-290 (295)
 33 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.2E-42 4.1E-47  306.0  21.0  248   45-345     5-264 (268)
 34 3tt0_A Basic fibroblast growth 100.0 8.1E-43 2.8E-47  322.8  20.6  256   41-344    62-351 (382)
 35 4hcu_A Tyrosine-protein kinase 100.0 3.7E-43 1.3E-47  309.5  17.0  250   42-344     4-265 (269)
 36 2ivs_A Proto-oncogene tyrosine 100.0   9E-43 3.1E-47  313.6  19.7  258   39-344    14-310 (314)
 37 3l9p_A Anaplastic lymphoma kin 100.0 4.1E-43 1.4E-47  323.0  17.6  252   45-344    68-344 (367)
 38 3o0g_A Cell division protein k 100.0 2.7E-42 9.2E-47  307.7  22.0  255   48-338     2-282 (292)
 39 3kul_A Ephrin type-A receptor  100.0 1.9E-42 6.5E-47  313.5  21.1  253   44-344    45-312 (325)
 40 1qcf_A Haematopoetic cell kina 100.0 9.2E-43 3.1E-47  329.5  19.7  251   40-344   180-443 (454)
 41 2pvf_A Fibroblast growth facto 100.0 1.9E-42 6.4E-47  314.6  20.8  258   39-344    26-317 (334)
 42 3q4u_A Activin receptor type-1 100.0   3E-42   1E-46  308.3  21.9  256   46-343     6-300 (301)
 43 2zv2_A Calcium/calmodulin-depe 100.0 5.5E-42 1.9E-46  306.5  23.5  270   46-338    11-292 (298)
 44 3niz_A Rhodanese family protei 100.0 1.7E-42 5.7E-47  311.9  20.0  255   46-338    19-300 (311)
 45 1luf_A Muscle-specific tyrosin 100.0   1E-42 3.4E-47  317.2  18.7  254   43-344    42-334 (343)
 46 2nru_A Interleukin-1 receptor- 100.0   1E-41 3.5E-46  305.9  24.3  258   51-344    34-305 (307)
 47 3oz6_A Mitogen-activated prote 100.0 1.6E-42 5.6E-47  321.4  19.6  261   46-339     7-329 (388)
 48 3gen_A Tyrosine-protein kinase 100.0   2E-42 6.9E-47  307.0  19.4  253   39-344    15-279 (283)
 49 3soa_A Calcium/calmodulin-depe 100.0 4.6E-42 1.6E-46  322.9  22.7  246   46-338     9-267 (444)
 50 3zgw_A Maternal embryonic leuc 100.0 1.5E-42 5.2E-47  316.3  18.6  242   46-338     8-260 (347)
 51 3tki_A Serine/threonine-protei 100.0 3.1E-42   1E-46  311.8  20.3  246   46-338     5-261 (323)
 52 1rjb_A FL cytokine receptor; k 100.0 1.7E-42   6E-47  315.9  18.8  258   40-344    37-333 (344)
 53 3qup_A Tyrosine-protein kinase 100.0 1.5E-42 5.3E-47  313.6  18.3  258   42-344    17-297 (323)
 54 1t46_A HOMO sapiens V-KIT hard 100.0 3.1E-42 1.1E-46  309.9  20.2  257   41-344    16-306 (313)
 55 3poz_A Epidermal growth factor 100.0 1.8E-42 6.3E-47  313.8  18.5  249   46-344    13-277 (327)
 56 1opk_A P150, C-ABL, proto-onco 100.0 1.5E-42   5E-47  331.3  18.5  251   42-344   214-477 (495)
 57 2qol_A Ephrin receptor; recept 100.0 2.3E-42   8E-47  318.6  18.7  252   44-343    41-307 (373)
 58 3og7_A AKAP9-BRAF fusion prote 100.0 2.8E-42 9.7E-47  307.1  18.6  255   43-344    19-287 (289)
 59 1o6l_A RAC-beta serine/threoni 100.0 1.4E-41 4.8E-46  308.9  23.4  242   47-338     4-260 (337)
 60 1k9a_A Carboxyl-terminal SRC k 100.0 2.6E-42 8.7E-47  326.0  18.9  246   41-344   186-444 (450)
 61 3brb_A Proto-oncogene tyrosine 100.0 3.7E-42 1.3E-46  309.7  18.6  259   41-344    27-307 (313)
 62 1tki_A Titin; serine kinase, m 100.0 4.8E-42 1.6E-46  310.3  19.4  241   47-338     4-257 (321)
 63 4eut_A Serine/threonine-protei 100.0 7.3E-42 2.5E-46  317.8  21.1  265   47-344     8-308 (396)
 64 4eqm_A Protein kinase; transfe 100.0 6.4E-42 2.2E-46  305.7  19.8  253   47-343    10-273 (294)
 65 3kex_A Receptor tyrosine-prote 100.0 3.9E-42 1.3E-46  311.4  18.5  249   46-344    11-275 (325)
 66 2bdw_A Hypothetical protein K1 100.0 9.6E-42 3.3E-46  313.2  21.2  244   47-338    28-284 (362)
 67 2pmi_A Negative RE, cyclin-dep 100.0 1.3E-41 4.6E-46  306.8  21.7  255   46-338     3-293 (317)
 68 3ttj_A Mitogen-activated prote 100.0 1.6E-41 5.5E-46  321.4  22.9  257   46-338    60-355 (464)
 69 1ob3_A PFPK5, cell division co 100.0 6.4E-42 2.2E-46  304.7  18.9  253   48-338     2-280 (288)
 70 3op5_A Serine/threonine-protei 100.0 6.2E-42 2.1E-46  314.9  19.4  272   45-343    32-327 (364)
 71 3kmu_A ILK, integrin-linked ki 100.0 9.5E-42 3.3E-46  300.2  19.7  249   45-345     7-270 (271)
 72 4e5w_A Tyrosine-protein kinase 100.0 9.4E-42 3.2E-46  305.3  19.9  261   46-345    19-302 (302)
 73 1fmk_A C-SRC, P60-SRC, tyrosin 100.0   4E-42 1.4E-46  324.8  18.4  251   40-344   176-439 (452)
 74 2xir_A Vascular endothelial gr 100.0 8.4E-42 2.9E-46  307.5  19.5  260   39-344    18-309 (316)
 75 3uc3_A Serine/threonine-protei 100.0 1.1E-41 3.8E-46  312.8  20.6  246   44-338    16-274 (361)
 76 2yab_A Death-associated protei 100.0 1.4E-41 4.9E-46  311.6  20.9  249   46-338    10-272 (361)
 77 3c0i_A Peripheral plasma membr 100.0 2.7E-41 9.1E-46  309.1  22.0  247   47-338    23-286 (351)
 78 3lxl_A Tyrosine-protein kinase 100.0 1.4E-41 4.6E-46  308.0  19.9  262   44-344    19-302 (327)
 79 3dtc_A Mitogen-activated prote 100.0 1.4E-41   5E-46  299.4  19.6  250   46-343     5-271 (271)
 80 1mp8_A Focal adhesion kinase 1 100.0 5.7E-42   2E-46  303.9  17.0  253   42-344     9-275 (281)
 81 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.3E-41 4.3E-46  311.1  19.7  244   45-338    20-280 (353)
 82 4f0f_A Serine/threonine-protei 100.0 5.5E-41 1.9E-45  298.3  23.2  253   46-343    17-287 (287)
 83 4dc2_A Protein kinase C IOTA t 100.0   1E-41 3.4E-46  315.7  19.0  247   45-333    49-307 (396)
 84 1p4o_A Insulin-like growth fac 100.0 1.1E-41 3.9E-46  307.7  18.7  256   40-343    17-297 (322)
 85 3t9t_A Tyrosine-protein kinase 100.0 6.4E-42 2.2E-46  301.0  16.6  249   43-344     3-263 (267)
 86 2izr_A Casein kinase I isoform 100.0 6.1E-42 2.1E-46  310.7  17.0  253   46-344     7-280 (330)
 87 3lxp_A Non-receptor tyrosine-p 100.0 3.9E-42 1.3E-46  310.4  15.4  257   49-344    32-309 (318)
 88 3lzb_A Epidermal growth factor 100.0 1.8E-41 6.2E-46  307.3  19.8  249   46-344    13-277 (327)
 89 1qpc_A LCK kinase; alpha beta  100.0 2.5E-41 8.5E-46  299.3  20.2  249   42-344     7-268 (279)
 90 3h4j_B AMPK kdaid, SNF1-like p 100.0   1E-41 3.5E-46  309.6  17.8  242   46-338     7-258 (336)
 91 3qd2_B Eukaryotic translation  100.0   2E-41 6.8E-46  306.9  19.4  242   48-338     6-325 (332)
 92 3gni_B Strad alpha; kinase fol 100.0 1.2E-41 4.2E-46  315.6  18.4  265   40-338    17-333 (389)
 93 4fr4_A YANK1, serine/threonine 100.0 3.7E-41 1.2E-45  310.9  21.4  245   46-338    13-271 (384)
 94 3kk8_A Calcium/calmodulin depe 100.0   6E-41   2E-45  297.5  21.9  244   47-338     5-261 (284)
 95 3dbq_A Dual specificity protei 100.0 3.7E-41 1.3E-45  307.2  20.9  245   46-338     7-273 (343)
 96 2i1m_A Macrophage colony-stimu 100.0 2.9E-41 9.8E-46  306.5  20.0  256   42-344    40-325 (333)
 97 3kfa_A Tyrosine-protein kinase 100.0 1.7E-41 5.8E-46  301.6  18.1  251   42-344     7-270 (288)
 98 2c30_A Serine/threonine-protei 100.0 1.3E-40 4.4E-45  300.9  23.9  240   49-338    46-294 (321)
 99 3a8x_A Protein kinase C IOTA t 100.0 4.4E-41 1.5E-45  306.8  21.0  246   46-333     7-264 (345)
100 3rp9_A Mitogen-activated prote 100.0 5.2E-41 1.8E-45  317.9  22.1  263   47-338    52-396 (458)
101 1csn_A Casein kinase-1; phosph 100.0 1.7E-41 5.8E-46  303.0  17.7  253   46-344     8-282 (298)
102 1xbb_A Tyrosine-protein kinase 100.0 2.9E-41   1E-45  300.8  19.1  256   41-344     9-278 (291)
103 1kob_A Twitchin; kinase, intra 100.0 6.3E-41 2.2E-45  310.0  21.8  242   47-338    50-304 (387)
104 3mdy_A Bone morphogenetic prot 100.0 7.3E-41 2.5E-45  304.1  21.9  257   46-344    35-330 (337)
105 2wqm_A Serine/threonine-protei 100.0 7.5E-41 2.6E-45  300.8  21.5  253   46-344    30-296 (310)
106 4aw2_A Serine/threonine-protei 100.0 6.9E-41 2.4E-45  313.9  22.1  250   44-338    70-338 (437)
107 1u5q_A Serine/threonine protei 100.0 6.3E-41 2.2E-45  306.2  21.2  240   47-338    53-305 (348)
108 3v8s_A RHO-associated protein  100.0 3.2E-41 1.1E-45  313.8  19.0  249   44-338    65-329 (410)
109 3cc6_A Protein tyrosine kinase 100.0 6.6E-41 2.3E-45  297.0  20.1  251   44-344     8-272 (281)
110 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.2E-40   4E-45  304.5  22.2  240   46-338    39-293 (350)
111 1xjd_A Protein kinase C, theta 100.0 4.2E-41 1.4E-45  306.7  19.1  243   45-337    14-268 (345)
112 1fot_A TPK1 delta, CAMP-depend 100.0 1.5E-40 5.2E-45  299.9  22.6  239   47-338     5-258 (318)
113 1u59_A Tyrosine-protein kinase 100.0 6.5E-41 2.2E-45  298.0  19.8  252   44-344     5-271 (287)
114 2y0a_A Death-associated protei 100.0 6.7E-41 2.3E-45  303.4  20.2  248   47-338    10-271 (326)
115 2eva_A TAK1 kinase - TAB1 chim 100.0 4.2E-41 1.4E-45  302.3  18.5  240   46-344     6-262 (307)
116 3f66_A Hepatocyte growth facto 100.0   6E-41   2E-45  299.7  19.4  257   41-344    18-290 (298)
117 3p1a_A MYT1 kinase, membrane-a 100.0 6.5E-41 2.2E-45  301.5  19.6  237   48-338    57-304 (311)
118 2w4o_A Calcium/calmodulin-depe 100.0   4E-41 1.4E-45  307.7  18.4  242   46-338    51-305 (349)
119 3g33_A Cell division protein k 100.0 2.3E-41 7.8E-46  303.9  16.5  260   46-338     7-296 (308)
120 1byg_A CSK, protein (C-termina 100.0 1.9E-41 6.5E-46  300.0  15.7  247   40-344    13-272 (278)
121 2zmd_A Dual specificity protei 100.0 1.2E-40 4.1E-45  308.9  21.6  244   46-338    54-320 (390)
122 4agu_A Cyclin-dependent kinase 100.0 1.5E-40 5.2E-45  298.8  21.5  254   48-338     3-284 (311)
123 2w1i_A JAK2; chromosomal rearr 100.0 8.2E-41 2.8E-45  302.8  19.6  260   46-344    39-321 (326)
124 4hgt_A Casein kinase I isoform 100.0 1.2E-40   4E-45  297.2  20.2  255   46-344     7-279 (296)
125 3pls_A Macrophage-stimulating  100.0 1.1E-40 3.7E-45  297.8  20.0  253   46-344    19-286 (298)
126 2h8h_A Proto-oncogene tyrosine 100.0 1.9E-41 6.5E-46  326.5  16.1  251   40-344   259-522 (535)
127 3n9x_A Phosphotransferase; mal 100.0 2.2E-40 7.6E-45  311.2  22.7  264   46-338    24-361 (432)
128 2eue_A Carbon catabolite derep 100.0 1.3E-40 4.3E-45  294.2  19.8  242   46-338    11-262 (275)
129 2yfx_A Tyrosine-protein kinase 100.0 6.9E-41 2.4E-45  303.4  18.6  252   45-344    27-303 (327)
130 1mqb_A Ephrin type-A receptor  100.0 1.9E-40 6.6E-45  301.3  21.5  252   44-343    40-307 (333)
131 1cm8_A Phosphorylated MAP kina 100.0 1.8E-40 6.2E-45  305.3  21.4  255   46-338    23-307 (367)
132 3llt_A Serine/threonine kinase 100.0 3.2E-40 1.1E-44  302.8  22.9  248   46-338    33-355 (360)
133 3gxj_A TGF-beta receptor type- 100.0 1.2E-42 4.1E-47  311.1   6.4  255   47-344     2-296 (303)
134 2i0e_A Protein kinase C-beta I 100.0 2.1E-40 7.3E-45  302.9  21.4  243   46-338    18-276 (353)
135 1u46_A ACK-1, activated CDC42  100.0 9.2E-41 3.1E-45  297.2  18.5  255   44-344    14-283 (291)
136 2ozo_A Tyrosine-protein kinase 100.0 7.1E-41 2.4E-45  327.0  19.2  252   44-344   331-597 (613)
137 3ork_A Serine/threonine protei 100.0 4.5E-41 1.5E-45  302.5  16.5  254   47-342    11-278 (311)
138 3nsz_A CK II alpha, casein kin 100.0 1.4E-40 4.9E-45  301.5  19.9  253   46-338    34-319 (330)
139 3kn6_A Ribosomal protein S6 ki 100.0 3.9E-41 1.3E-45  304.9  16.1  241   53-338    16-270 (325)
140 3c1x_A Hepatocyte growth facto 100.0 3.8E-41 1.3E-45  310.3  16.2  252   46-344    87-354 (373)
141 2acx_A G protein-coupled recep 100.0 1.7E-40 5.9E-45  319.0  21.2  246   46-338   182-444 (576)
142 2xrw_A Mitogen-activated prote 100.0 2.2E-40 7.6E-45  305.3  21.0  257   46-338    23-318 (371)
143 2x4f_A Myosin light chain kina 100.0 5.2E-40 1.8E-44  302.8  23.3  236   53-338    94-342 (373)
144 3a62_A Ribosomal protein S6 ki 100.0   2E-40   7E-45  300.4  20.2  245   46-338    15-276 (327)
145 3g2f_A Bone morphogenetic prot 100.0 1.8E-40 6.3E-45  301.5  20.0  264   45-344    10-317 (336)
146 1nxk_A MAP kinase-activated pr 100.0 1.5E-40   5E-45  309.3  19.7  243   47-338    60-321 (400)
147 2vd5_A DMPK protein; serine/th 100.0 2.2E-40 7.4E-45  308.5  20.7  249   45-338    58-327 (412)
148 2y94_A 5'-AMP-activated protei 100.0 3.7E-40 1.3E-44  312.0  22.5  242   46-338    14-266 (476)
149 2h34_A Serine/threonine-protei 100.0 5.5E-40 1.9E-44  295.2  22.4  253   46-344    32-295 (309)
150 3eb0_A Putative uncharacterize 100.0 8.5E-41 2.9E-45  309.3  17.4  253   44-338     3-321 (383)
151 2yex_A Serine/threonine-protei 100.0 3.7E-40 1.3E-44  291.1  20.7  245   47-338     6-261 (276)
152 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.3E-40 4.3E-45  302.0  18.1  256   46-338    32-318 (329)
153 1b6c_B TGF-B superfamily recep 100.0 2.1E-40 7.2E-45  301.7  19.6  257   46-344    40-335 (342)
154 3uzp_A CKI-delta, CKID, casein 100.0 2.3E-40   8E-45  295.3  19.3  255   46-344     7-279 (296)
155 2w5a_A Serine/threonine-protei 100.0 1.1E-40 3.9E-45  294.9  17.1  251   46-341     4-270 (279)
156 3hko_A Calcium/calmodulin-depe 100.0 1.5E-40 5.2E-45  303.1  18.3  253   44-338    22-330 (345)
157 1ua2_A CAK, cell division prot 100.0   2E-40 6.8E-45  302.7  19.1  259   46-338     8-291 (346)
158 3fdn_A Serine/threonine-protei 100.0 6.2E-40 2.1E-44  290.4  21.7  241   46-338     7-257 (279)
159 4fvq_A Tyrosine-protein kinase 100.0 9.2E-41 3.2E-45  297.0  16.4  242   46-344     6-274 (289)
160 3mtl_A Cell division protein k 100.0 3.4E-41 1.2E-45  305.1  13.7  253   48-338     2-281 (324)
161 3mi9_A Cell division protein k 100.0 4.1E-40 1.4E-44  301.1  21.0  260   46-338    15-311 (351)
162 4aaa_A Cyclin-dependent kinase 100.0   9E-41 3.1E-45  303.2  16.3  258   44-338    21-306 (331)
163 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.2E-40 1.4E-44  315.3  21.8  246   46-337   183-447 (543)
164 4fl3_A Tyrosine-protein kinase 100.0 9.3E-41 3.2E-45  327.1  17.4  250   47-344   367-630 (635)
165 4ejn_A RAC-alpha serine/threon 100.0 1.7E-40 5.7E-45  313.4  18.5  243   46-338   146-404 (446)
166 3fme_A Dual specificity mitoge 100.0 2.4E-40 8.1E-45  294.4  18.5  246   44-338     3-266 (290)
167 3mwu_A Calmodulin-domain prote 100.0 1.3E-40 4.3E-45  317.6  17.6  243   47-338    21-276 (486)
168 2r5t_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45  305.9  17.6  240   46-335    36-286 (373)
169 2qr7_A Ribosomal protein S6 ki 100.0 6.5E-41 2.2E-45  305.3  14.9  242   47-338    21-277 (342)
170 2wtk_C Serine/threonine-protei 100.0 9.2E-40 3.1E-44  292.8  22.1  247   47-338     4-263 (305)
171 3qyz_A Mitogen-activated prote 100.0 8.9E-40 3.1E-44  300.5  22.0  259   46-338    25-313 (364)
172 3dls_A PAS domain-containing s 100.0   9E-41 3.1E-45  303.7  15.1  242   46-339    22-275 (335)
173 3kvw_A DYRK2, dual specificity 100.0 5.5E-40 1.9E-44  308.1  20.9  250   46-338    95-408 (429)
174 2v62_A Serine/threonine-protei 100.0 6.9E-40 2.3E-44  299.1  20.9  271   46-343    35-326 (345)
175 2buj_A Serine/threonine-protei 100.0 2.3E-40 7.7E-45  298.5  17.4  255   44-344    25-305 (317)
176 2fst_X Mitogen-activated prote 100.0   2E-40 6.9E-45  304.9  16.8  255   46-338    27-311 (367)
177 2a19_B Interferon-induced, dou 100.0 6.6E-40 2.3E-44  290.6  19.5  238   47-344    10-273 (284)
178 3q60_A ROP5B; pseudokinase, tr 100.0 2.3E-40 7.7E-45  305.2  17.0  250   46-338    60-352 (371)
179 1wak_A Serine/threonine-protei 100.0 1.2E-39 4.2E-44  302.4  22.1  255   47-338    36-391 (397)
180 1t4h_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44  290.5  20.6  247   45-338    23-282 (290)
181 1fvr_A Tyrosine-protein kinase 100.0   4E-40 1.4E-44  298.3  18.0  247   46-344    23-299 (327)
182 2a2a_A Death-associated protei 100.0 7.4E-40 2.5E-44  295.9  19.6  248   47-338    11-272 (321)
183 3e3p_A Protein kinase, putativ 100.0 6.9E-40 2.3E-44  300.5  19.6  259   41-338    16-314 (360)
184 3f3z_A Calcium/calmodulin-depe 100.0 9.4E-40 3.2E-44  288.8  19.7  241   47-338     8-261 (277)
185 3eqc_A Dual specificity mitoge 100.0 4.9E-40 1.7E-44  301.7  18.6  191   46-272    31-232 (360)
186 3is5_A Calcium-dependent prote 100.0 1.1E-39 3.6E-44  290.0  20.0  240   48-338    22-278 (285)
187 3a7i_A MST3 kinase, serine/thr 100.0 1.9E-39 6.6E-44  290.6  21.6  243   46-339    20-271 (303)
188 3lij_A Calcium/calmodulin depe 100.0   1E-39 3.4E-44  311.9  20.9  242   48-338    37-291 (494)
189 3rgf_A Cyclin-dependent kinase 100.0 3.9E-40 1.3E-44  307.1  17.6  259   48-338    20-333 (405)
190 1j1b_A Glycogen synthase kinas 100.0 2.8E-40 9.6E-45  309.4  16.6  250   47-338    53-336 (420)
191 3i6u_A CDS1, serine/threonine- 100.0   2E-40 6.9E-45  310.2  15.1  251   46-338   133-399 (419)
192 3ll6_A Cyclin G-associated kin 100.0 1.8E-39 6.2E-44  294.6  20.6  252   44-344    24-307 (337)
193 2r3i_A Cell division protein k 100.0   2E-39 6.8E-44  289.8  20.5  255   47-338     2-283 (299)
194 3an0_A Dual specificity mitoge 100.0 7.6E-40 2.6E-44  298.0  17.8  245   44-338    47-310 (340)
195 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.6E-39   9E-44  297.4  21.5  244   43-343    60-337 (365)
196 2vwi_A Serine/threonine-protei 100.0 5.5E-40 1.9E-44  293.8  16.4  259   40-338     7-287 (303)
197 2owb_A Serine/threonine-protei 100.0 1.8E-39 6.2E-44  295.1  20.0  243   46-338    39-291 (335)
198 2jii_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44  302.1  15.0  255   46-344    40-335 (352)
199 3nyv_A Calmodulin-domain prote 100.0 3.5E-40 1.2E-44  314.3  15.7  244   47-338    25-281 (484)
200 3cok_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44  287.8  18.4  243   46-338     9-262 (278)
201 2ac3_A MAP kinase-interacting  100.0   3E-39   1E-43  291.0  20.9  252   47-338    11-295 (316)
202 2rku_A Serine/threonine-protei 100.0 2.3E-39   8E-44  288.8  19.7  243   46-338    13-265 (294)
203 3q5i_A Protein kinase; CDPK, m 100.0 2.9E-39 9.8E-44  309.5  21.7  255   46-338    34-301 (504)
204 2vgo_A Serine/threonine-protei 100.0   3E-39   1E-43  286.7  20.1  241   46-338    12-262 (284)
205 4exu_A Mitogen-activated prote 100.0 1.5E-39 5.1E-44  299.7  18.7  254   46-338    40-323 (371)
206 2jam_A Calcium/calmodulin-depe 100.0 1.6E-39 5.4E-44  291.4  18.4  241   47-338     8-261 (304)
207 2y7j_A Phosphorylase B kinase  100.0 6.9E-39 2.4E-43  294.6  22.4  251   46-338    92-359 (365)
208 2j0j_A Focal adhesion kinase 1 100.0 1.7E-39   6E-44  319.2  19.5  251   44-344   386-650 (656)
209 3sv0_A Casein kinase I-like; t 100.0   1E-39 3.6E-44  309.5  17.3  252   47-343     6-276 (483)
210 3pg1_A Mitogen-activated prote 100.0 1.6E-39 5.6E-44  298.3  18.1  269   42-338    16-316 (362)
211 3pfq_A PKC-B, PKC-beta, protei 100.0 4.9E-39 1.7E-43  316.9  22.7  244   45-338   338-597 (674)
212 3bhy_A Death-associated protei 100.0 1.2E-39 4.1E-44  288.9  16.6  247   48-338     5-265 (283)
213 3com_A Serine/threonine-protei 100.0 8.3E-39 2.8E-43  287.9  22.2  242   45-338    26-278 (314)
214 3coi_A Mitogen-activated prote 100.0 5.1E-39 1.8E-43  294.1  21.1  253   47-338    23-305 (353)
215 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.4E-40 1.8E-44  296.2  14.4  253   41-344    26-301 (319)
216 2b9h_A MAP kinase FUS3, mitoge 100.0 3.4E-39 1.2E-43  295.1  19.5  259   46-338     9-305 (353)
217 1z57_A Dual specificity protei 100.0 1.5E-38   5E-43  288.8  23.5  249   47-338    13-328 (339)
218 1x8b_A WEE1HU, WEE1-like prote 100.0 4.1E-39 1.4E-43  285.8  19.3  235   47-338    10-279 (289)
219 4e7w_A Glycogen synthase kinas 100.0 1.1E-39 3.8E-44  302.9  16.3  250   46-338    38-321 (394)
220 2clq_A Mitogen-activated prote 100.0 5.9E-39   2E-43  286.1  20.3  243   46-338    20-278 (295)
221 2x7f_A TRAF2 and NCK-interacti 100.0 4.7E-39 1.6E-43  291.0  19.9  245   44-338    20-286 (326)
222 2j7t_A Serine/threonine-protei 100.0 1.7E-39   6E-44  290.6  16.5  243   46-338    17-275 (302)
223 3lm5_A Serine/threonine-protei 100.0   3E-39   1E-43  292.7  18.1  244   47-338    27-287 (327)
224 1phk_A Phosphorylase kinase; g 100.0 1.3E-38 4.5E-43  284.4  21.9  252   46-338    15-283 (298)
225 2h6d_A 5'-AMP-activated protei 100.0 6.1E-39 2.1E-43  283.4  19.4  242   46-338     9-261 (276)
226 3cek_A Dual specificity protei 100.0 9.2E-39 3.2E-43  287.6  20.7  247   44-338    24-292 (313)
227 2ycf_A Serine/threonine-protei 100.0 1.8E-39 6.3E-44  293.4  15.6  250   47-338     9-274 (322)
228 2eu9_A Dual specificity protei 100.0 2.5E-38 8.5E-43  289.2  23.2  249   47-338    18-333 (355)
229 3aln_A Dual specificity mitoge 100.0 3.4E-39 1.2E-43  292.2  17.1  250   42-338    16-285 (327)
230 3byv_A Rhoptry kinase; malaria 100.0 2.2E-40 7.6E-45  305.9   9.4  235   47-338    72-359 (377)
231 1vzo_A Ribosomal protein S6 ki 100.0 1.1E-39 3.7E-44  298.9  13.6  251   46-339    52-322 (355)
232 1blx_A Cyclin-dependent kinase 100.0 3.8E-39 1.3E-43  291.5  16.8  258   46-338     9-296 (326)
233 2vx3_A Dual specificity tyrosi 100.0 4.6E-38 1.6E-42  290.9  23.9  249   47-338    53-372 (382)
234 2pml_X PFPK7, Ser/Thr protein  100.0 3.4E-38 1.1E-42  287.9  21.9  267   46-338    29-322 (348)
235 2dyl_A Dual specificity mitoge 100.0 3.1E-38 1.1E-42  284.4  20.5  248   43-338    20-283 (318)
236 1q8y_A SR protein kinase; tran 100.0 3.2E-38 1.1E-42  290.7  20.9  255   46-338    17-333 (373)
237 2i6l_A Mitogen-activated prote 100.0   4E-38 1.4E-42  283.7  20.5  257   47-338    10-305 (320)
238 1zy4_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43  284.2  17.4  244   47-338     5-283 (303)
239 2wei_A Calmodulin-domain prote 100.0 1.9E-38 6.6E-43  282.0  16.7  243   47-338    21-276 (287)
240 3fhr_A MAP kinase-activated pr 100.0   2E-38 6.7E-43  288.4  15.2  244   46-338    26-287 (336)
241 2rio_A Serine/threonine-protei 100.0 9.8E-38 3.4E-42  293.3  17.0  239   49-338    16-295 (434)
242 3a99_A Proto-oncogene serine/t 100.0 4.7E-38 1.6E-42  284.0  13.7  240   44-338    39-293 (320)
243 2iwi_A Serine/threonine-protei 100.0 9.2E-38 3.2E-42  280.9  15.5  240   44-338    27-283 (312)
244 3p23_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42  295.5  12.1  241   44-338    20-283 (432)
245 2pzi_A Probable serine/threoni 100.0   1E-36 3.5E-41  301.7  19.0  236   47-343    79-326 (681)
246 3qa8_A MGC80376 protein; kinas 100.0 4.8E-37 1.6E-41  298.2  15.6  251   47-336    13-295 (676)
247 3dzo_A Rhoptry kinase domain;  100.0 2.5E-36 8.6E-41  281.9  14.2  236   47-338    77-363 (413)
248 3uqc_A Probable conserved tran 100.0 3.7E-36 1.3E-40  267.2  13.8  226   48-344    31-264 (286)
249 3m2w_A MAP kinase-activated pr 100.0 4.6E-35 1.6E-39  261.8  17.0  221   46-338    15-256 (299)
250 2vuw_A Serine/threonine-protei 100.0 9.8E-35 3.3E-39  263.9  12.3  243   46-337    18-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.7E-29 5.7E-34  244.1   4.2  189   55-269   241-437 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 5.7E-27 1.9E-31  225.2   8.6  191   51-270   339-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 3.6E-23 1.2E-27  182.9   9.9  166   44-245    86-253 (282)
254 1zth_A RIO1 serine protein kin  99.8 2.7E-18 9.3E-23  149.7  11.5  156   46-219    45-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.6 1.2E-15 4.1E-20  138.8   9.9  160   46-219    93-265 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.1 1.8E-10 6.1E-15  100.1   9.1  139   47-217    13-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.0 1.3E-09 4.6E-14   94.1   9.7  138   46-217    18-213 (264)
258 3dxp_A Putative acyl-COA dehyd  98.8 3.4E-08 1.1E-12   89.8  12.9  140   50-218    40-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.5   2E-07 6.8E-12   82.6   8.2  181   53-270    25-287 (304)
260 3r70_A Aminoglycoside phosphot  98.3 5.5E-06 1.9E-10   73.8  12.7  129   49-218    38-237 (320)
261 3d1u_A Putative fructosamine-3  97.9 5.4E-05 1.9E-09   66.3   9.9   76   50-160    17-95  (288)
262 3tdw_A Gentamicin resistance p  97.9 0.00021 7.3E-09   63.0  13.8  130   53-218    24-224 (306)
263 3ovc_A Hygromycin-B 4-O-kinase  97.8 0.00023 7.7E-09   64.5  12.3  136   48-219    41-244 (362)
264 4gkh_A Aminoglycoside 3'-phosp  97.8  0.0003   1E-08   60.7  12.5  137   47-217    24-222 (272)
265 2olc_A MTR kinase, methylthior  97.4  0.0006   2E-08   62.4   9.5   30  188-218   227-256 (397)
266 3ats_A Putative uncharacterize  97.4 0.00054 1.9E-08   61.6   8.8   31  188-218   222-252 (357)
267 3jr1_A Putative fructosamine-3  97.2  0.0039 1.3E-07   55.0  12.1   75   51-160    39-116 (312)
268 2q83_A YTAA protein; 2635576,   97.2  0.0076 2.6E-07   53.4  14.1   30  188-217   222-251 (346)
269 3f7w_A Putative fructosamine-3  97.1  0.0023 7.8E-08   55.7   9.6   36   47-84     14-49  (288)
270 3dxq_A Choline/ethanolamine ki  96.7  0.0099 3.4E-07   51.9  10.3  126   53-218    23-202 (301)
271 2pyw_A Uncharacterized protein  96.5   0.012   4E-07   54.2   9.8   30  188-218   232-261 (420)
272 1nw1_A Choline kinase (49.2 KD  96.0   0.031 1.1E-06   51.6  10.0   31   53-83     78-114 (429)
273 2ppq_A HSK, HK, homoserine kin  96.0    0.02 6.9E-07   50.3   8.0   29  189-217   188-216 (322)
274 3feg_A Choline/ethanolamine ki  95.9   0.036 1.2E-06   50.2   9.6   30  188-217   220-253 (379)
275 1zyl_A Hypothetical protein YI  95.8   0.052 1.8E-06   47.8  10.2   28  189-218   196-223 (328)
276 3csv_A Aminoglycoside phosphot  95.2   0.047 1.6E-06   48.3   7.6   32  188-219   183-218 (333)
277 2qg7_A Ethanolamine kinase PV0  95.1    0.11 3.9E-06   48.2  10.0   30   53-83    113-142 (458)
278 3c5i_A Choline kinase; choline  94.6   0.099 3.4E-06   46.9   8.2   28  189-217   213-240 (369)
279 3i1a_A Spectinomycin phosphotr  94.2    0.15   5E-06   45.3   8.2   31  188-218   206-236 (339)
280 3cxl_A N-chimerin; SH2, RHO-GA  93.5   0.015 5.1E-07   54.3   0.3   65   51-144   145-215 (463)
281 2yle_A Protein spire homolog 1  93.4     1.3 4.6E-05   36.4  11.7   88  160-265    43-131 (229)
282 3f2s_A CK, chetk-alpha, cholin  93.4    0.31 1.1E-05   44.3   8.8   30  188-217   244-279 (401)
283 4ann_A ESSB; membrane protein,  75.3      11 0.00038   30.7   7.7  112  131-275    43-162 (215)
284 3g15_A CK, chetk-alpha, cholin  65.3     3.4 0.00012   37.3   2.8   29  190-218   246-280 (401)
285 3mes_A Choline kinase; malaria  59.7     4.3 0.00015   37.0   2.4   30  188-218   262-291 (424)
286 4ano_A ESSB; membrane protein,  59.6     8.2 0.00028   31.6   3.8   80  163-272    82-164 (219)
287 3oja_A Leucine-rich immune mol  58.8    0.64 2.2E-05   43.4  -3.4   30  117-146   323-352 (487)
288 2fq3_A Transcription regulator  43.7      18 0.00063   25.6   3.0   35  307-341    44-78  (104)
289 2l2t_A Receptor tyrosine-prote  40.7      14 0.00046   21.7   1.6    6   19-24     35-40  (44)
290 3mes_A Choline kinase; malaria  38.4      70  0.0024   28.9   6.9  100   53-186    75-182 (424)
291 2ks1_B Epidermal growth factor  38.4      28 0.00096   20.3   2.7    6   19-24     36-41  (44)
292 2klu_A T-cell surface glycopro  32.2      32  0.0011   22.0   2.4   29    5-33     18-46  (70)
293 2rdd_B UPF0092 membrane protei  23.2      19 0.00067   20.0   0.2   12   14-25     18-29  (37)
294 2x6h_A GH13170P, VPS34, phosph  22.2      86  0.0029   30.4   4.6   34  177-217   542-575 (696)

No 1  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=2.5e-56  Score=398.00  Aligned_cols=262  Identities=22%  Similarity=0.360  Sum_probs=199.4

Q ss_pred             hhhhhhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 046907           37 KAKDLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKK  116 (345)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (345)
                      +...-.|+++.+++++.++||+|+||+||+|+++    ..||||.++....+                         ...
T Consensus        25 ~~~~~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~----~~vAvK~~~~~~~~-------------------------~~~   75 (307)
T 3omv_A           25 RDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWH----GDVAVKILKVVDPT-------------------------PEQ   75 (307)
T ss_dssp             ----CCCBCCTTSCCEEEECCCCSSSEEEEEESS----SEEEEEECCCSSCC-------------------------HHH
T ss_pred             CCCCcCcEEcHHHeEEeeEEeeCCCcEEEEEEEC----CcEEEEEEEecCCC-------------------------HHH
Confidence            3444468889999999999999999999999974    24999998754333                         233


Q ss_pred             HHHHHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcC
Q 046907          117 MRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHH  186 (345)
Q Consensus       117 ~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~  186 (345)
                      .+.|.+|+.++++++|||||++++++..+   .+++++||+++|++          +++..+..++.|++.||.|||+++
T Consensus        76 ~~~f~~E~~il~~l~HpNIV~l~g~~~~~---~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~  152 (307)
T 3omv_A           76 FQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN  152 (307)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEECC---eEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            67799999999999999999999987654   37899999998754          677788899999999999999998


Q ss_pred             CCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc---cccCccchhh-HHHHHHH
Q 046907          187 CPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM---LTLTEKCDIY-FGALLAG  262 (345)
Q Consensus       187 ~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~---~~~~~~~Dvw-lG~vl~e  262 (345)
                         |+||||||+|||++.++.+||+|||+|+..............+||+.|||||++.+   .+++.++||| ||+++||
T Consensus       153 ---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~E  229 (307)
T 3omv_A          153 ---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYE  229 (307)
T ss_dssp             ---CBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHH
T ss_pred             ---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHH
Confidence               99999999999999999999999999987654333333456789999999999964   3589999999 9999999


Q ss_pred             HHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 046907          263 LVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQ  342 (345)
Q Consensus       263 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~  342 (345)
                      |+||..||.+..   +.......+......+..         ....+++...+.++|..||+.||++|||+.+|++.|+.
T Consensus       230 lltg~~Pf~~~~---~~~~~~~~~~~~~~~p~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~  297 (307)
T 3omv_A          230 LMTGELPYSHIN---NRDQIIFMVGRGYASPDL---------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL  297 (307)
T ss_dssp             HHHSSCTTTTCC---CHHHHHHHHHTTCCCCCS---------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred             HHHCCCCCCCCC---hHHHHHHHHhcCCCCCCc---------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            999999975422   222233333222211111         11122334457788999999999999999999999998


Q ss_pred             hhC
Q 046907          343 IQH  345 (345)
Q Consensus       343 l~~  345 (345)
                      |++
T Consensus       298 l~~  300 (307)
T 3omv_A          298 LQH  300 (307)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            864


No 2  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=5.6e-56  Score=395.42  Aligned_cols=251  Identities=19%  Similarity=0.348  Sum_probs=202.9

Q ss_pred             hhcCCcccccccccCcceeeEEEEecC----CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPG----QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQI  120 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (345)
                      ++.++|.+.+.||+|+||.||+|++..    .++..||||.+....                           ....++|
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---------------------------~~~~~~f   62 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---------------------------DNARKDF   62 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC---------------------------HHHHHHH
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC---------------------------hHHHHHH
Confidence            356789999999999999999998752    357899999996432                           2235678


Q ss_pred             HHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------------------CCHHHHHHHHHHHHHH
Q 046907          121 QSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------------------LDWLARHRIALGLACG  178 (345)
Q Consensus       121 ~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------------------l~~~~~~~i~~~i~~~  178 (345)
                      .+|++++++++|||||++++++.+++  .+++++||+++|++                      +++..+..++.|++.|
T Consensus        63 ~~E~~il~~l~HpnIV~l~g~~~~~~--~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~g  140 (299)
T 4asz_A           63 HREAELLTNLQHEHIVKFYGVCVEGD--PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG  140 (299)
T ss_dssp             HHHHHHHTTCCCTTBCCEEEEECSSS--SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCccEEEEEeeCC--EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence            99999999999999999999998776  68999999998765                      5666778999999999


Q ss_pred             HHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HH
Q 046907          179 LEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FG  257 (345)
Q Consensus       179 l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG  257 (345)
                      |.|||+++   |+||||||+|||++.++.+||+|||+|+...............||+.|||||++.+..++.++||| ||
T Consensus       141 l~yLH~~~---iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~G  217 (299)
T 4asz_A          141 MVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG  217 (299)
T ss_dssp             HHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             HHHHHhCC---cccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHH
Confidence            99999998   999999999999999999999999999876544433344456799999999999999999999999 99


Q ss_pred             HHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 046907          258 ALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV  336 (345)
Q Consensus       258 ~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~l  336 (345)
                      +++|||+| |..||..    .+..+....+......+.+             +.+...+.+||.+||+.||++|||+.+|
T Consensus       218 vvl~Ellt~G~~Pf~~----~~~~~~~~~i~~~~~~~~p-------------~~~~~~~~~li~~cl~~dP~~RPs~~~i  280 (299)
T 4asz_A          218 VVLWEIFTYGKQPWYQ----LSNNEVIECITQGRVLQRP-------------RTCPQEVYELMLGCWQREPHMRKNIKGI  280 (299)
T ss_dssp             HHHHHHHTTTCCTTTT----SCHHHHHHHHHHTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHHHcCCCCCCCC----CCHHHHHHHHHcCCCCCCC-------------ccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence            99999999 8999754    2344454444433222111             1223357789999999999999999999


Q ss_pred             HHHHhhhh
Q 046907          337 RRMLSQIQ  344 (345)
Q Consensus       337 l~~L~~l~  344 (345)
                      .+.|+++.
T Consensus       281 ~~~L~~~~  288 (299)
T 4asz_A          281 HTLLQNLA  288 (299)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999874


No 3  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=2.1e-55  Score=396.95  Aligned_cols=251  Identities=21%  Similarity=0.326  Sum_probs=196.2

Q ss_pred             hhcCCcccccccccCcceeeEEEEecC----CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPG----QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQI  120 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (345)
                      .+.++|.+.++||+|+||.||+|++++    .++..||||.+....                           ....+.|
T Consensus        38 i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---------------------------~~~~~~f   90 (329)
T 4aoj_A           38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---------------------------ESARQDF   90 (329)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS---------------------------HHHHHHH
T ss_pred             cCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC---------------------------HHHHHHH
Confidence            356788999999999999999999753    358899999996432                           2235678


Q ss_pred             HHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC------------------------CCHHHHHHHHHHHH
Q 046907          121 QSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE------------------------LDWLARHRIALGLA  176 (345)
Q Consensus       121 ~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~------------------------l~~~~~~~i~~~i~  176 (345)
                      .+|+.++++++|||||++++++..++  .+++++||+++|++                        +++..+.+++.|++
T Consensus        91 ~~E~~il~~l~HpnIV~l~g~~~~~~--~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia  168 (329)
T 4aoj_A           91 QREAELLTMLQHQHIVRFFGVCTEGR--PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA  168 (329)
T ss_dssp             HHHHHHHTTCCCTTBCCEEEEECSSS--SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999998776  68999999998765                        56677889999999


Q ss_pred             HHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-
Q 046907          177 CGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-  255 (345)
Q Consensus       177 ~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-  255 (345)
                      .||.|||+.+   |+||||||+|||++.++.+||+|||+|+...............||+.|||||++.+..++.++||| 
T Consensus       169 ~gl~yLH~~~---iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS  245 (329)
T 4aoj_A          169 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS  245 (329)
T ss_dssp             HHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHH
T ss_pred             HHHHHHhcCC---eecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccc
Confidence            9999999998   999999999999999999999999999876544333334457899999999999999999999999 


Q ss_pred             HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHH
Q 046907          256 FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSK  334 (345)
Q Consensus       256 lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~  334 (345)
                      ||+++|||+| |..||..    ....+....+......+.+             +.+...+.+||.+||+.||++|||+.
T Consensus       246 ~Gvvl~Ellt~G~~Pf~~----~~~~~~~~~i~~g~~~~~p-------------~~~~~~~~~li~~cl~~dP~~RPs~~  308 (329)
T 4aoj_A          246 FGVVLWEIFTYGKQPWYQ----LSNTEAIDCITQGRELERP-------------RACPPEVYAIMRGCWQREPQQRHSIK  308 (329)
T ss_dssp             HHHHHHHHHTTSCCTTCS----SCHHHHHHHHHHTCCCCCC-------------TTCCHHHHHHHHHHCCSSTTTSCCHH
T ss_pred             hHHHHHHHHcCCCCCCCC----CCHHHHHHHHHcCCCCCCc-------------ccccHHHHHHHHHHcCcChhHCcCHH
Confidence            9999999999 8999654    2344444444433222111             11223477899999999999999999


Q ss_pred             HHHHHHhhhh
Q 046907          335 DVRRMLSQIQ  344 (345)
Q Consensus       335 ~ll~~L~~l~  344 (345)
                      +|++.|+.+.
T Consensus       309 ei~~~L~~l~  318 (329)
T 4aoj_A          309 DVHARLQALA  318 (329)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999999874


No 4  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=1.2e-55  Score=394.96  Aligned_cols=251  Identities=24%  Similarity=0.339  Sum_probs=202.4

Q ss_pred             hhcCCcccccccccCcceeeEEEEecC----CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPG----QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQI  120 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (345)
                      ...++++++++||+|+||.||+|++.+    .++..||||.+......                          ...+.|
T Consensus        23 i~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~--------------------------~~~~~f   76 (308)
T 4gt4_A           23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--------------------------PLREEF   76 (308)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC---------------------------CHHHH
T ss_pred             CCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccCh--------------------------HHHHHH
Confidence            355678999999999999999999843    35789999999643211                          124678


Q ss_pred             HHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-------------------------CCHHHHHHHHHHH
Q 046907          121 QSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------------------LDWLARHRIALGL  175 (345)
Q Consensus       121 ~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------------------l~~~~~~~i~~~i  175 (345)
                      .+|+.++++++|||||+++|++..++  .+++++||+++|++                         +++..+.+++.|+
T Consensus        77 ~~E~~il~~l~HpNIV~l~g~~~~~~--~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi  154 (308)
T 4gt4_A           77 RHEAMLRARLQHPNVVCLLGVVTKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQI  154 (308)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCcceEEEECC--EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHH
Confidence            89999999999999999999998776  58899999998765                         4556778999999


Q ss_pred             HHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh
Q 046907          176 ACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY  255 (345)
Q Consensus       176 ~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw  255 (345)
                      +.||.|||+.+   ++||||||+|||++.++.+||+|||+|+...............||+.|||||++.+..++.++|||
T Consensus       155 a~gl~yLH~~~---iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVw  231 (308)
T 4gt4_A          155 AAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW  231 (308)
T ss_dssp             HHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHHHhCC---CCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhh
Confidence            99999999998   999999999999999999999999999876544333334557899999999999999999999999


Q ss_pred             -HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCH
Q 046907          256 -FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNS  333 (345)
Q Consensus       256 -lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~  333 (345)
                       ||+++|||+| |..||.+    .+..++...+......+.             +++++..+.+||.+||+.||++|||+
T Consensus       232 SfGvvl~El~t~g~~Pf~~----~~~~~~~~~i~~~~~~~~-------------p~~~~~~~~~li~~C~~~dP~~RPs~  294 (308)
T 4gt4_A          232 SYGVVLWEVFSYGLQPYCG----YSNQDVVEMIRNRQVLPC-------------PDDCPAWVYALMIECWNEFPSRRPRF  294 (308)
T ss_dssp             HHHHHHHHHHTTTCCTTTT----CCHHHHHHHHHTTCCCCC-------------CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hHHHHHHHHHhCCCCCCCC----CCHHHHHHHHHcCCCCCC-------------cccchHHHHHHHHHHcCCChhHCcCH
Confidence             9999999998 8999654    344455554443322111             11233457789999999999999999


Q ss_pred             HHHHHHHhhh
Q 046907          334 KDVRRMLSQI  343 (345)
Q Consensus       334 ~~ll~~L~~l  343 (345)
                      .+|++.|+++
T Consensus       295 ~ei~~~L~a~  304 (308)
T 4gt4_A          295 KDIHSRLRAW  304 (308)
T ss_dssp             HHHHHHHHTS
T ss_pred             HHHHHHHHhc
Confidence            9999999875


No 5  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1e-53  Score=386.48  Aligned_cols=242  Identities=21%  Similarity=0.313  Sum_probs=190.5

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      -++|++++.||+|+||+||+|+++ .+|+.||||.+.....+                         .+..+.+.+|+.+
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~i~~~~~~-------------------------~~~~~~~~~E~~i   76 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKST-EDGRQYVIKEINISRMS-------------------------SKEREESRREVAV   76 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEET-TTCCEEEEEEEECTTSC-------------------------HHHHHHHHHHHHH
T ss_pred             ccceEEeEEEecCCCeEEEEEEEC-CCCCEEEEEEEehHHCC-------------------------HHHHHHHHHHHHH
Confidence            468999999999999999999864 57999999999754332                         2336678899999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++++|||||++++++.+++  .+|++|||++||++           +++.....++.|++.||.|||+++   |+||||
T Consensus        77 l~~l~HpnIV~~~~~~~~~~--~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDl  151 (350)
T 4b9d_A           77 LANMKHPNIVQYRESFEENG--SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDI  151 (350)
T ss_dssp             HHHCCCTTBCCEEEEEEETT--EEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTC
T ss_pred             HHHCCCCCCCcEEEEEEECC--EEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccC
Confidence            99999999999999998876  79999999998765           345566789999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      ||+|||++.++.+||+|||+|+......  ....+.+||+.|||||++.+..|+.++||| +||++|||++|..||..  
T Consensus       152 Kp~NILl~~~g~vKl~DFGla~~~~~~~--~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~--  227 (350)
T 4b9d_A          152 KSQNIFLTKDGTVQLGDFGIARVLNSTV--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA--  227 (350)
T ss_dssp             CGGGEEECTTCCEEECSTTEESCCCHHH--HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--
T ss_pred             CHHHEEECCCCCEEEcccccceeecCCc--ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--
Confidence            9999999999999999999998654321  123456899999999999999999999999 99999999999999743  


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                        .+..+....+...   ..+.      .    .......+.+||.+||+.||++|||+.++++
T Consensus       228 --~~~~~~~~~i~~~---~~~~------~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          228 --GSMKNLVLKIISG---SFPP------V----SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             --SSHHHHHHHHHHT---CCCC------C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --cCHHHHHHHHHcC---CCCC------C----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              2333343333322   2111      0    0111234778899999999999999999975


No 6  
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=1.2e-53  Score=388.58  Aligned_cols=256  Identities=22%  Similarity=0.330  Sum_probs=206.9

Q ss_pred             hHHhhcCCcccccccccCcceeeEEEEecCC----CCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 046907           42 AFLEKKGGLASLEKIGSGGCGEVYKAELPGQ----NGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKM  117 (345)
Q Consensus        42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (345)
                      .|+...++|++++.||+|+||.||+|++.+.    +++.||||.+......                          ...
T Consensus        58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~--------------------------~~~  111 (353)
T 4ase_A           58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--------------------------SEH  111 (353)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH--------------------------HHH
T ss_pred             ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh--------------------------HHH
Confidence            4788899999999999999999999997532    3578999999653221                          235


Q ss_pred             HHHHHHHHHHhhcc-CCCccceeEEEecCCcceeeeeccccCCCCC-------------------------CCHHHHHHH
Q 046907          118 RQIQSEINTVGQIR-HRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------------------LDWLARHRI  171 (345)
Q Consensus       118 ~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------------------l~~~~~~~i  171 (345)
                      +.+.+|+.+|.+++ |||||+++++|..++ ..+++++||+++|++                         +++..+..+
T Consensus       112 ~~~~~E~~il~~l~hhpnIV~l~g~~~~~~-~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  190 (353)
T 4ase_A          112 RALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY  190 (353)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECCTT-SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCcEEEEEEEEEecC-CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHH
Confidence            67899999999995 599999999987654 257899999998765                         455667789


Q ss_pred             HHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCcc
Q 046907          172 ALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEK  251 (345)
Q Consensus       172 ~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~  251 (345)
                      +.|++.||.|||+++   |+||||||+|||++.++.+||+|||+|+...............||+.|||||++.+..++.+
T Consensus       191 ~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~k  267 (353)
T 4ase_A          191 SFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ  267 (353)
T ss_dssp             HHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHhHhhCC---eecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCc
Confidence            999999999999998   99999999999999999999999999987755544445566789999999999999999999


Q ss_pred             chhh-HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCC
Q 046907          252 CDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNE  329 (345)
Q Consensus       252 ~Dvw-lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~  329 (345)
                      +||| ||+++|||+| |..||.+..   ....+...+......+.+.             .+...+.++|..||+.||++
T Consensus       268 sDVwS~Gv~l~El~t~G~~Pf~~~~---~~~~~~~~i~~g~~~~~p~-------------~~~~~~~~li~~c~~~dP~~  331 (353)
T 4ase_A          268 SDVWSFGVLLWEIFSLGASPYPGVK---IDEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQ  331 (353)
T ss_dssp             HHHHHHHHHHHHHTTTSCCSSTTCC---CSHHHHHHHHHTCCCCCCT-------------TCCHHHHHHHHHHTCSSGGG
T ss_pred             ccEeehHHHHHHHHhCCCCCCCCCC---HHHHHHHHHHcCCCCCCCc-------------cCCHHHHHHHHHHcCcChhH
Confidence            9999 9999999998 899975432   2233444444333222211             11234778889999999999


Q ss_pred             CCCHHHHHHHHhhh
Q 046907          330 RPNSKDVRRMLSQI  343 (345)
Q Consensus       330 Rpt~~~ll~~L~~l  343 (345)
                      |||+.+|++.|+++
T Consensus       332 RPt~~eil~~L~~l  345 (353)
T 4ase_A          332 RPTFSELVEHLGNL  345 (353)
T ss_dssp             SCCHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHH
Confidence            99999999999886


No 7  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=3.9e-53  Score=382.11  Aligned_cols=241  Identities=21%  Similarity=0.360  Sum_probs=196.0

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      +.|+++++||+|+||.||+|+++ .+|+.||||.+......                           ..+.+.+|+.+|
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~-~tg~~vAiK~i~~~~~~---------------------------~~~~~~~Ei~il  125 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVR-SSGKLVAVKKMDLRKQQ---------------------------RRELLFNEVVIM  125 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEGGGCS---------------------------SGGGGHHHHHHH
T ss_pred             HhcEEeEEeecCcCeEEEEEEEC-CCCCEEEEEEEecCchh---------------------------HHHHHHHHHHHH
Confidence            56999999999999999999964 68999999999532111                           134467899999


Q ss_pred             hhccCCCccceeEEEecCCcceeeeeccccCCCCC--------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCC
Q 046907          128 GQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE--------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVN  199 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~--------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~n  199 (345)
                      +.++|||||++++++.+++  .+|++|||+++|++        +++..+..++.|++.||.|||+++   |+||||||+|
T Consensus       126 ~~l~HpnIV~l~~~~~~~~--~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~N  200 (346)
T 4fih_A          126 RDYQHENVVEMYNSYLVGD--ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDS  200 (346)
T ss_dssp             HHCCCTTBCCEEEEEEETT--EEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGG
T ss_pred             HhCCCCCCCcEEEEEEECC--EEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHH
Confidence            9999999999999999887  79999999999754        667777899999999999999999   9999999999


Q ss_pred             eeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccccc
Q 046907          200 VLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTN  278 (345)
Q Consensus       200 il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~  278 (345)
                      ||++.++.+||+|||+|+.......  ...+.+||+.|||||++.+..|+.++||| +||++|||++|..||..    .+
T Consensus       201 ILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~----~~  274 (346)
T 4fih_A          201 ILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN----EP  274 (346)
T ss_dssp             EEECTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT----SC
T ss_pred             EEECCCCCEEEecCcCceecCCCCC--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC----cC
Confidence            9999999999999999987654322  23567999999999999999999999999 99999999999999643    33


Q ss_pred             hhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          279 EMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ..+....+....   .+..        .........+.+||.+||+.||++|||+.|+++
T Consensus       275 ~~~~~~~i~~~~---~~~~--------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          275 PLKAMKMIRDNL---PPRL--------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHHHHHHHHSS---CCCC--------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHcCC---CCCC--------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            444444443321   1110        011122234778999999999999999999875


No 8  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=5.3e-53  Score=375.84  Aligned_cols=243  Identities=21%  Similarity=0.302  Sum_probs=197.2

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++++.||+|+||+||+|+.+ .+|+.||||.+.....                        ......+.+.+|+++
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~-~~~~~~AiK~i~k~~~------------------------~~~~~~~~~~~E~~i   85 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLAREL-ATSREYAIKILEKRHI------------------------IKENKVPYVTRERDV   85 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHH------------------------HHTTCHHHHHHHHHH
T ss_pred             ccccEEEEEEecccCeEEEEEEEC-CCCCEEEEEEEEHHHC------------------------CCHHHHHHHHHHHHH
Confidence            357999999999999999999964 6899999999952110                        112235678899999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +++++|||||++++++.+++  .+|++|||++||++         +++.....++.|++.||.|||+++   |+||||||
T Consensus        86 l~~l~HpnIv~l~~~~~~~~--~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKP  160 (311)
T 4aw0_A           86 MSRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKP  160 (311)
T ss_dssp             HTTCCCTTBCCEEEEEECSS--EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSG
T ss_pred             HHhCCCCCCCeEEEEEEeCC--EEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCH
Confidence            99999999999999998876  79999999999765         555666789999999999999999   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQH  276 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~  276 (345)
                      +|||++.++.+||+|||+|+.+..........+.+||+.|||||++.+..++.++||| +||++|||++|..||..    
T Consensus       161 eNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~----  236 (311)
T 4aw0_A          161 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----  236 (311)
T ss_dssp             GGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC----
T ss_pred             HHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC----
Confidence            9999999999999999999987544433345668999999999999999999999999 99999999999999643    


Q ss_pred             cchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 046907          277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVR  337 (345)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll  337 (345)
                      .+.......+....   ..   +    +...    ...+.+|+.+||+.||++|||+.|++
T Consensus       237 ~~~~~~~~~i~~~~---~~---~----p~~~----s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          237 GNEGLIFAKIIKLE---YD---F----PEKF----FPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             SSHHHHHHHHHHTC---CC---C----CTTC----CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             CCHHHHHHHHHcCC---CC---C----Cccc----CHHHHHHHHHHccCCHhHCcChHHHc
Confidence            33444444433221   10   0    1111    22467899999999999999998863


No 9  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=1.6e-52  Score=370.73  Aligned_cols=244  Identities=20%  Similarity=0.316  Sum_probs=188.8

Q ss_pred             CCc-ccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGL-ASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        48 ~~~-~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      ++| ++.++||+|+||.||+|+++ .++..||+|.+.....+                         ....++|.+|+.+
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~-~~~~~vAiK~i~~~~~~-------------------------~~~~~~~~~E~~i   78 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRKLT-------------------------KSERQRFKEEAEM   78 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSC-------------------------HHHHHHHHHHHHH
T ss_pred             CceEEeeeEEecCcCcEEEEEEEC-CCCeEEEEEEEchhhCC-------------------------HHHHHHHHHHHHH
Confidence            344 67788999999999999965 57999999999643222                         2235678999999


Q ss_pred             HhhccCCCccceeEEEec--CCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          127 VGQIRHRNLHPLLAHVTR--PDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~--~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++++|||||++++++.+  .+...++++|||+++|++         +++..+..++.|++.||.|||+++ ++|+||||
T Consensus        79 l~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDl  157 (290)
T 3fpq_A           79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDL  157 (290)
T ss_dssp             HHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCC
T ss_pred             HHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEeccc
Confidence            999999999999999865  334578999999999875         455666789999999999999986 35999999


Q ss_pred             CCCCeeec-CCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          196 NPVNVLLD-DDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       196 k~~nil~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      ||+|||++ .++.+||+|||+|+.....    ...+.+||+.|||||++.+ .++.++||| +||++|||+||..||.+.
T Consensus       158 Kp~NILl~~~~g~vKl~DFGla~~~~~~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~  232 (290)
T 3fpq_A          158 KCDNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC  232 (290)
T ss_dssp             CGGGEEESSTTSCEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ChhheeEECCCCCEEEEeCcCCEeCCCC----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            99999998 4789999999999754332    2245789999999999876 699999999 999999999999997432


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         .+...+...+.   ....+. ..+    ....    ..+.++|.+||+.||++|||+.++++
T Consensus       233 ---~~~~~~~~~i~---~~~~~~-~~~----~~~~----~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          233 ---QNAAQIYRRVT---SGVKPA-SFD----KVAI----PEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ---SSHHHHHHHHT---TTCCCG-GGG----GCCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---CcHHHHHHHHH---cCCCCC-CCC----ccCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence               22222322222   111111 111    1111    23678899999999999999999975


No 10 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=1.2e-52  Score=377.93  Aligned_cols=248  Identities=22%  Similarity=0.265  Sum_probs=193.7

Q ss_pred             HHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           43 FLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQS  122 (345)
Q Consensus        43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (345)
                      +....+.|++.++||+|+||.||+|+++ .+|+.||||.+....                                ...+
T Consensus        53 ~~~~~~~~~~~~~lG~G~fG~Vy~a~~~-~~g~~vAiK~i~~~~--------------------------------~~~~   99 (336)
T 4g3f_A           53 YREEVHWMTHQPRVGRGSFGEVHRMKDK-QTGFQCAVKKVRLEV--------------------------------FRVE   99 (336)
T ss_dssp             CCBTTTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTT--------------------------------CCTH
T ss_pred             hhcchhheEeCcEeccCCCeEEEEEEEC-CCCCEEEEEEECHHH--------------------------------hHHH
Confidence            3445667899999999999999999964 679999999995321                                1136


Q ss_pred             HHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 046907          123 EINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHR  193 (345)
Q Consensus       123 E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~  193 (345)
                      |+.+++.++|||||++++++.+++  .+|++|||++||++         +++.....++.|++.||.|||+++   |+||
T Consensus       100 E~~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHR  174 (336)
T 4g3f_A          100 ELVACAGLSSPRIVPLYGAVREGP--WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHG  174 (336)
T ss_dssp             HHHTTTTCCCTTBCCEEEEEEETT--EEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECS
T ss_pred             HHHHHHhCCCCCCCcEEEEEEECC--EEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceec
Confidence            999999999999999999998876  78999999999765         566677789999999999999998   9999


Q ss_pred             CCCCCCeeecCCC-CeEEeccccceecCCCCcc---eeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCC
Q 046907          194 DLNPVNVLLDDDI-EARISGFGFARAIPDAHTH---ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKL  268 (345)
Q Consensus       194 dlk~~nil~~~~~-~~kl~Dfg~a~~~~~~~~~---~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~  268 (345)
                      ||||+|||++.++ .+||+|||+|+........   ......+||+.|||||++.+.+++.++||| +||++|||++|..
T Consensus       175 DlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~  254 (336)
T 4g3f_A          175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCH  254 (336)
T ss_dssp             CCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcC
Confidence            9999999999887 6999999999877543221   122346899999999999999999999999 9999999999999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQI  343 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l  343 (345)
                      ||......    .....+..   ...+..    .    .++.....+.++|.+||+.||++|||+.|+++.|...
T Consensus       255 Pf~~~~~~----~~~~~i~~---~~~~~~----~----~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          255 PWTQYFRG----PLCLKIAS---EPPPIR----E----IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             SSTTTCCS----CCHHHHHH---SCCGGG----G----SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCHH----HHHHHHHc---CCCCch----h----cCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            98653322    22222221   111110    1    1112233467888999999999999999999887654


No 11 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=3.8e-52  Score=372.63  Aligned_cols=263  Identities=24%  Similarity=0.333  Sum_probs=191.7

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      .+|.+.+.||+|+||.||+|++   +|+.||||++....                            .....+..|+..+
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~---~g~~VAvK~l~~~~----------------------------~~~~~~e~Ei~~~   51 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSRE----------------------------ERSWFREAEIYQT   51 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE---TTEEEEEEEECGGG----------------------------HHHHHHHHHHHTS
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE---CCEEEEEEEECccc----------------------------hhhHHHHHHHHHH
Confidence            3688899999999999999997   58899999985311                            0112234577777


Q ss_pred             hhccCCCccceeEEEecCCc--ceeeeeccccCCCCC--------CCHHHHHHHHHHHHHHHHHHhhcC-----CCCeEe
Q 046907          128 GQIRHRNLHPLLAHVTRPDC--HLLYILNDVSQGRRE--------LDWLARHRIALGLACGLEYLHMHH-----CPRIIH  192 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~--~~l~~~~~~~~~~~~--------l~~~~~~~i~~~i~~~l~~lh~~~-----~~~iiH  192 (345)
                      .+++|||||++++++..++.  ..+++++||+++|++        +++..+.+++.|++.||.|||+.+     .++|+|
T Consensus        52 ~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiH  131 (303)
T 3hmm_A           52 VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH  131 (303)
T ss_dssp             TTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEEC
T ss_pred             hcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEee
Confidence            88999999999999987653  357999999999875        456677899999999999999871     123999


Q ss_pred             cCCCCCCeeecCCCCeEEeccccceecCCCCcc--eeccCcccCcccccccccccc------ccCccchhh-HHHHHHHH
Q 046907          193 RDLNPVNVLLDDDIEARISGFGFARAIPDAHTH--ITTSNVVGTVEYIAPEYLQML------TLTEKCDIY-FGALLAGL  263 (345)
Q Consensus       193 ~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~gt~~~~aPE~~~~~------~~~~~~Dvw-lG~vl~el  263 (345)
                      |||||+|||++.++.+||+|||+|+........  ......+||+.|||||++.+.      .++.++||| ||+++|||
T Consensus       132 RDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El  211 (303)
T 3hmm_A          132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI  211 (303)
T ss_dssp             SCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHH
Confidence            999999999999999999999999876543322  123346899999999999764      467899999 99999999


Q ss_pred             HhCCCCCccccccc-------chhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 046907          264 VMGKLPSDKFFQHT-------NEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV  336 (345)
Q Consensus       264 ~tg~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~l  336 (345)
                      +||..||.......       ........+............++...   ...++...+.+||.+||+.||++||||.+|
T Consensus       212 ~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~ei  288 (303)
T 3hmm_A          212 ARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRI  288 (303)
T ss_dssp             HHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG---GSSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred             HHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccc---cchHHHHHHHHHHHHHcccCHhHCcCHHHH
Confidence            99987754221110       00011112222221221111111111   123566778999999999999999999999


Q ss_pred             HHHHhhhh
Q 046907          337 RRMLSQIQ  344 (345)
Q Consensus       337 l~~L~~l~  344 (345)
                      ++.|++|.
T Consensus       289 ~~~L~~l~  296 (303)
T 3hmm_A          289 KKTLSQLS  296 (303)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999884


No 12 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.4e-51  Score=361.76  Aligned_cols=240  Identities=21%  Similarity=0.353  Sum_probs=179.7

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++++.||+|+||.||+|+.+ .+|+.||||.+.......                        .....++.+|+.++
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~-~~~~~vAiK~i~~~~~~~------------------------~~~~~~~~~Ei~il   67 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHT-TTGQKVALKIINKKVLAK------------------------SDMQGRIEREISYL   67 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECT-TTCCEEEEEEEECC------------------------------CHHHHHHHHHHH
T ss_pred             eCeEEEEEEecCcCeEEEEEEEC-CCCCEEEEEEEeHHHcCC------------------------HHHHHHHHHHHHHH
Confidence            68999999999999999999854 689999999996543221                        12356788999999


Q ss_pred             hhccCCCccceeEEEecCCcceeeeeccccCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCC
Q 046907          128 GQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG--------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVN  199 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~--------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~n  199 (345)
                      +.++|||||++++++.+++  .++++|||++|        ...+++.....++.|++.||.|||+++   |+||||||+|
T Consensus        68 ~~l~HpnIv~~~~~~~~~~--~~~ivmEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~N  142 (275)
T 3hyh_A           68 RLLRHPHIIKLYDVIKSKD--EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPEN  142 (275)
T ss_dssp             HHCCCTTBCCEEEEEECSS--EEEEEEECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTT
T ss_pred             HHCCCCCCCeEEEEEEECC--EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHH
Confidence            9999999999999998876  78999999954        234677778899999999999999999   9999999999


Q ss_pred             eeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc-Cccchhh-HHHHHHHHHhCCCCCccccccc
Q 046907          200 VLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL-TEKCDIY-FGALLAGLVMGKLPSDKFFQHT  277 (345)
Q Consensus       200 il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~-~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~  277 (345)
                      ||++.++.+||+|||+|+......   ...+.+||+.|||||++.+..+ +.++||| +||++|+|++|..||..    .
T Consensus       143 ILl~~~~~vkl~DFGla~~~~~~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~----~  215 (275)
T 3hyh_A          143 LLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD----E  215 (275)
T ss_dssp             EEECTTCCEEECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC----S
T ss_pred             eEECCCCCEEEeecCCCeecCCCC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC----C
Confidence            999999999999999998654432   2345789999999999998886 5799999 99999999999999743    3


Q ss_pred             chhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          278 NEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      +.......+....   ..   ++     ..   ....+.+++.+||+.||++|||+.|+++
T Consensus       216 ~~~~~~~~i~~~~---~~---~p-----~~---~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          216 SIPVLFKNISNGV---YT---LP-----KF---LSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             SHHHHHHHHHHTC---CC---CC-----TT---SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHcCC---CC---CC-----CC---CCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            3333433333221   11   00     11   1234678899999999999999999986


No 13 
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=5.9e-52  Score=383.31  Aligned_cols=242  Identities=21%  Similarity=0.361  Sum_probs=196.7

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .+.|+++++||+|+||.||+|+++ .+|+.||||.+......                           ..+.+.+|+.+
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~-~tg~~vAiK~i~~~~~~---------------------------~~~~~~~Ei~i  201 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVR-SSGKLVAVKKMDLRKQQ---------------------------RRELLFNEVVI  201 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEESTTCS---------------------------SGGGHHHHHHH
T ss_pred             hHhcEeeeEeccCcCcEEEEEEEC-CCCCEEEEEEEeccchh---------------------------HHHHHHHHHHH
Confidence            357999999999999999999965 68999999999643221                           13456789999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC--------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE--------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPV  198 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~--------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~  198 (345)
                      |+.++|||||++++++.+++  .+|++|||++||++        +++..+..++.|++.||.|||+++   |+||||||+
T Consensus       202 l~~l~HpnIV~l~~~~~~~~--~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~  276 (423)
T 4fie_A          202 MRDYQHENVVEMYNSYLVGD--ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSD  276 (423)
T ss_dssp             HHHCCCTTBCCEEEEEEETT--EEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTT
T ss_pred             HHhCCCCCCCceEEEEEECC--EEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHH
Confidence            99999999999999999887  79999999999764        566677899999999999999999   999999999


Q ss_pred             CeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccccccc
Q 046907          199 NVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHT  277 (345)
Q Consensus       199 nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~  277 (345)
                      |||++.++.+||+|||+|+.......  ...+.+||+.|||||++.+..|+.++||| +||++|||++|..||..    .
T Consensus       277 NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~----~  350 (423)
T 4fie_A          277 SILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN----E  350 (423)
T ss_dssp             TEEECTTCCEEECCCTTCEECCSSCC--CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT----S
T ss_pred             HEEEcCCCCEEEecCccceECCCCCc--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC----c
Confidence            99999999999999999987654322  33567999999999999999999999999 99999999999999643    3


Q ss_pred             chhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          278 NEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      +.......+....   .+...        ........+.+||.+||+.||++|||+.|+++
T Consensus       351 ~~~~~~~~i~~~~---~~~~~--------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          351 PPLKAMKMIRDNL---PPRLK--------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             CHHHHHHHHHHSC---CCCCS--------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHcCC---CCCCc--------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            3444444443321   11100        00111234678899999999999999999976


No 14 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=2.1e-51  Score=365.33  Aligned_cols=243  Identities=21%  Similarity=0.315  Sum_probs=186.8

Q ss_pred             hcCCcccccccccCcceeeEEEEec--CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELP--GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      +.++|++++.||+|+||+||+|+..  ..+++.||||.+........                         ...++.+|
T Consensus        22 ~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-------------------------~~~~~~~E   76 (304)
T 3ubd_A           22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-------------------------DRVRTKME   76 (304)
T ss_dssp             CGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-------------------------ECC-----
T ss_pred             CccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-------------------------HHHHHHHH
Confidence            4468999999999999999999853  34688999999965433211                         12346789


Q ss_pred             HHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          124 INTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      +.++++++|||||++++++.+++  .+|++|||++||++         +++..+..++.|++.||.|||+++   |+|||
T Consensus        77 ~~il~~l~HpnIv~l~~~~~~~~--~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRD  151 (304)
T 3ubd_A           77 RDILVEVNHPFIVKLHYAFQTEG--KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRD  151 (304)
T ss_dssp             -CCCCCCCCTTEECEEEEEEETT--EEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSS
T ss_pred             HHHHHHCCCCCCCeEEEEEEECC--EEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCC
Confidence            99999999999999999999876  79999999999865         556667789999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      |||+|||++.++.+||+|||+|+.......  ...+.+||+.|||||++.+..++.++||| +||++|||++|..||.. 
T Consensus       152 lKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~-  228 (304)
T 3ubd_A          152 LKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG-  228 (304)
T ss_dssp             CCGGGEEECTTSCEEEESSEEEEC-----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC-
T ss_pred             CCHHHeEEcCCCCEEecccccceeccCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC-
Confidence            999999999999999999999986543221  23457899999999999999999999999 99999999999999643 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNS-----KDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~-----~~ll~  338 (345)
                         .+..+....+....   ..   +    +..    ....+.+++.+||+.||++|||+     +|+++
T Consensus       229 ---~~~~~~~~~i~~~~---~~---~----p~~----~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          229 ---KDRKETMTMILKAK---LG---M----PQF----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             ---SSHHHHHHHHHHCC---CC---C----CTT----SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             ---cCHHHHHHHHHcCC---CC---C----CCc----CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence               33344444333221   11   0    111    12346788999999999999985     56653


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=1.4e-50  Score=361.06  Aligned_cols=242  Identities=22%  Similarity=0.375  Sum_probs=178.3

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++++.||+|+||+||+|+++ .+|+.||||.+.....                          ....+++.+|+.++
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~i~~~~~--------------------------~~~~~~~~~E~~il   57 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNK-VDDCNYAIKRIRLPNR--------------------------ELAREKVMREVKAL   57 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEET-TTCCEEEEEEEEECSS--------------------------HHHHHHHHHHHHHH
T ss_pred             hhCEEeeEEecCCCeEEEEEEEC-CCCCEEEEEEEeccCC--------------------------HHHHHHHHHHHHHH
Confidence            36999999999999999999964 5799999999864321                          12356788999999


Q ss_pred             hhccCCCccceeEEEecCCc----------ceeeeeccccCCCCCCCH------------HHHHHHHHHHHHHHHHHhhc
Q 046907          128 GQIRHRNLHPLLAHVTRPDC----------HLLYILNDVSQGRRELDW------------LARHRIALGLACGLEYLHMH  185 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~----------~~l~~~~~~~~~~~~l~~------------~~~~~i~~~i~~~l~~lh~~  185 (345)
                      ++++|||||++++++...+.          ..+|+++||+.++++.++            ..+..++.|+++||.|||++
T Consensus        58 ~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~  137 (299)
T 4g31_A           58 AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK  137 (299)
T ss_dssp             TTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999876542          247899999998865433            33567999999999999999


Q ss_pred             CCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcc----------eeccCcccCccccccccccccccCccchhh
Q 046907          186 HCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTH----------ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY  255 (345)
Q Consensus       186 ~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw  255 (345)
                      +   |+||||||+|||++.++.+||+|||+|+........          ....+.+||+.|||||++.+..++.++|||
T Consensus       138 ~---IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~Diw  214 (299)
T 4g31_A          138 G---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIF  214 (299)
T ss_dssp             T---CCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHH
T ss_pred             c---CccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHH
Confidence            9   999999999999999999999999999876543211          112346899999999999999999999999


Q ss_pred             -HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHH
Q 046907          256 -FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSK  334 (345)
Q Consensus       256 -lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~  334 (345)
                       +||++|||++   ||..      ..+....+........+.          ..+.......+++.+||+.||++|||+.
T Consensus       215 SlGvilyell~---Pf~~------~~~~~~~~~~~~~~~~p~----------~~~~~~~~~~~li~~~L~~dP~~Rps~~  275 (299)
T 4g31_A          215 SLGLILFELLY---PFST------QMERVRTLTDVRNLKFPP----------LFTQKYPCEYVMVQDMLSPSPMERPEAI  275 (299)
T ss_dssp             HHHHHHHHHHS---CCSS------HHHHHHHHHHHHTTCCCH----------HHHHHCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHHHHcc---CCCC------ccHHHHHHHHHhcCCCCC----------CCcccCHHHHHHHHHHcCCChhHCcCHH
Confidence             9999999995   7532      112222222222111110          1122233466799999999999999999


Q ss_pred             HHHH
Q 046907          335 DVRR  338 (345)
Q Consensus       335 ~ll~  338 (345)
                      ++++
T Consensus       276 eil~  279 (299)
T 4g31_A          276 NIIE  279 (299)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            9986


No 16 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.9e-49  Score=362.98  Aligned_cols=258  Identities=21%  Similarity=0.311  Sum_probs=198.0

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++++.||+|+||.||+|+++ .+|+.||||++......                         .....++.+|+.+|
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~-~t~~~vAiK~i~~~~~~-------------------------~~~~~~~~~Ei~il  107 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRR-LTGQQVAIKKIPNAFDV-------------------------VTNAKRTLRELKIL  107 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEETTTTSS-------------------------HHHHHHHHHHHHHH
T ss_pred             CCeEEEEEEecccCeEEEEEEEC-CCCCEEEEEEECccccc-------------------------hHHHHHHHHHHHHH
Confidence            57999999999999999999864 68999999999654322                         22356778999999


Q ss_pred             hhccCCCccceeEEEecC----CcceeeeeccccCCC--------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          128 GQIRHRNLHPLLAHVTRP----DCHLLYILNDVSQGR--------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~----~~~~l~~~~~~~~~~--------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +.++|||||++++++...    +...+|++|||++|+        ..+++..+..++.|++.||.|||+++   |+||||
T Consensus       108 ~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDl  184 (398)
T 4b99_A          108 KHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDL  184 (398)
T ss_dssp             HHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCC
T ss_pred             HhcCCCCcceEeeeeecccccccCCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCc
Confidence            999999999999988654    234689999999752        34778888999999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCC--cceeccCcccCccccccccccccc-cCccchhh-HHHHHHHHHhCCCCCc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAH--THITTSNVVGTVEYIAPEYLQMLT-LTEKCDIY-FGALLAGLVMGKLPSD  271 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~~gt~~~~aPE~~~~~~-~~~~~Dvw-lG~vl~el~tg~~p~~  271 (345)
                      ||+|||++.++.+||+|||+|+.+....  ......+.+||+.|||||++.+.. ++.++||| +||++|||++|.+||.
T Consensus       185 KP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~  264 (398)
T 4b99_A          185 KPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP  264 (398)
T ss_dssp             CGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSC
T ss_pred             CccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCC
Confidence            9999999999999999999998764322  122345679999999999988764 68999999 9999999999999964


Q ss_pred             ccccccchhhHHHHHHHHhhhcCCCccc--------------cccccC---CCcHHHHHHHHHHHhhccCCCCCCCCCHH
Q 046907          272 KFFQHTNEMSFVKWMRNVMASENPKRAI--------------DSKLVG---NGCEEQMLLVLKIACFCTLEDPNERPNSK  334 (345)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~---~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~  334 (345)
                          ..+..+....+......+......              .+....   ...+.....+.+|+.+||+.||++|||+.
T Consensus       265 ----g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~  340 (398)
T 4b99_A          265 ----GKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAA  340 (398)
T ss_dssp             ----CSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             ----CCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHH
Confidence                345555555555554333221100              000000   00011234577899999999999999999


Q ss_pred             HHHH
Q 046907          335 DVRR  338 (345)
Q Consensus       335 ~ll~  338 (345)
                      |+++
T Consensus       341 e~L~  344 (398)
T 4b99_A          341 AALR  344 (398)
T ss_dssp             HHTT
T ss_pred             HHhc
Confidence            9875


No 17 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.7e-47  Score=349.94  Aligned_cols=255  Identities=19%  Similarity=0.262  Sum_probs=191.7

Q ss_pred             cCCcccccccccCcceeeEEEEec--CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELP--GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      .++|++.+.||+|+||.||+|+.+  ..+++.||+|.+....                             ...++.+|+
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----------------------------~~~~~~~E~   70 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----------------------------HPIRIAAEL   70 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----------------------------CHHHHHHHH
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----------------------------CHHHHHHHH
Confidence            468999999999999999999854  2467899999985431                             133467899


Q ss_pred             HHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          125 NTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       125 ~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++|+.+ +|||||++++++..++  .+++++||++++++      +++..+..++.|++.||.|||+++   |+||||||
T Consensus        71 ~~l~~~~~h~nIv~l~~~~~~~~--~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKP  145 (361)
T 4f9c_A           71 QCLTVAGGQDNVMGVKYCFRKND--HVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKP  145 (361)
T ss_dssp             HHHHHTCSBTTBCCCSEEEEETT--EEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSG
T ss_pred             HHHHHhcCCCCCceEEEEEEECC--EEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCH
Confidence            999988 7999999999998876  79999999998754      677788899999999999999999   99999999


Q ss_pred             CCeeecCC-CCeEEeccccceecCCCCcc--------------------------eeccCcccCccccccccccccc-cC
Q 046907          198 VNVLLDDD-IEARISGFGFARAIPDAHTH--------------------------ITTSNVVGTVEYIAPEYLQMLT-LT  249 (345)
Q Consensus       198 ~nil~~~~-~~~kl~Dfg~a~~~~~~~~~--------------------------~~~~~~~gt~~~~aPE~~~~~~-~~  249 (345)
                      +|||++.+ +.+||+|||+|+...+....                          ......+||+.|||||++.+.+ ++
T Consensus       146 eNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~  225 (361)
T 4f9c_A          146 SNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQT  225 (361)
T ss_dssp             GGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCC
T ss_pred             HHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCC
Confidence            99999876 79999999999865432210                          1123468999999999998765 89


Q ss_pred             ccchhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCC------------------Ccc------------
Q 046907          250 EKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENP------------------KRA------------  298 (345)
Q Consensus       250 ~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~------------  298 (345)
                      .++||| +||++|||++|..||   +...++.+....+....+.+..                  ...            
T Consensus       226 ~~~DiWSlG~il~ell~G~~Pf---~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  302 (361)
T 4f9c_A          226 TAIDMWSAGVIFLSLLSGRYPF---YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMD  302 (361)
T ss_dssp             THHHHHHHHHHHHHHHHTCSSS---SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC---
T ss_pred             CccchhhhHHHHHHHHHCCCCC---CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccc
Confidence            999999 999999999999996   4444444444444333221100                  000            


Q ss_pred             -cccccc---------CCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          299 -IDSKLV---------GNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       299 -~~~~~~---------~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                       ..+...         .........++.+|+.+||+.||++|||++|+++
T Consensus       303 ~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~  352 (361)
T 4f9c_A          303 SSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALL  352 (361)
T ss_dssp             -------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence             000000         0001112245678999999999999999999985


No 18 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=5.3e-46  Score=359.42  Aligned_cols=241  Identities=19%  Similarity=0.245  Sum_probs=194.1

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++++.||+|+||.||+|+.+ .+|+.||+|.+.....                           ...+.+.+|+.+|
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~-~tg~~~AiK~i~~~~~---------------------------~~~~~~~~Ei~il  208 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTER-ATGNNFAAKFVMTPHE---------------------------SDKETVRKEIQTM  208 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCSH---------------------------HHHHHHHHHHHHH
T ss_pred             cccEEEEEEeeccCeEEEEEEEC-CCCCEEEEEEEeccch---------------------------hhHHHHHHHHHHH
Confidence            58999999999999999999864 6899999999965321                           1245677899999


Q ss_pred             hhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          128 GQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +.++|||||++++++.+++  .+++++||+.||++          +++..+..++.||+.||.|||+++   |+||||||
T Consensus       209 ~~l~hpnIv~l~~~~~~~~--~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp  283 (573)
T 3uto_A          209 SVLRHPTLVNLHDAFEDDN--EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKP  283 (573)
T ss_dssp             HHTCCTTBCCEEEEEECSS--EEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCG
T ss_pred             HhCCCCCCCeEEEEEEECC--EEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCh
Confidence            9999999999999998776  79999999998764          445567889999999999999999   99999999


Q ss_pred             CCeeecC--CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          198 VNVLLDD--DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       198 ~nil~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      +|||++.  .+.+||+|||+|+.+.....   ....+||+.|||||++.+.+++.++||| +||++|||++|..||.+  
T Consensus       284 ~Nill~~~~~~~vKl~DFG~a~~~~~~~~---~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~--  358 (573)
T 3uto_A          284 ENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG--  358 (573)
T ss_dssp             GGEEESSSSCCCEEECCCSSCEECCTTSE---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC--
T ss_pred             hhccccCCCCCCEEEeeccceeEccCCCc---eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--
Confidence            9999985  47999999999998754432   3346899999999999999999999999 99999999999999643  


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                        .+..+....+......  .    +....    +.....+.+||..||+.||++|||+.|+++
T Consensus       359 --~~~~~~~~~i~~~~~~--~----~~~~~----~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          359 --ENDDETLRNVKSCDWN--M----DDSAF----SGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             --SSHHHHHHHHHTTCCC--C----CSGGG----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --cCHHHHHHHHHhCCCC--C----Ccccc----cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              3334444433322111  0    01111    111234678899999999999999999986


No 19 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=6.2e-46  Score=358.20  Aligned_cols=246  Identities=23%  Similarity=0.283  Sum_probs=187.1

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      -++|++++.||+|+||.||+|+.+ .+|+.||||.+.........                     ..........++.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~-~tg~~~AiK~i~K~~i~~~~---------------------~~~~~~~E~~~l~l  245 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKMKQ---------------------GETLALNERIMLSL  245 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHTT---------------------CHHHHHHHHHHHHH
T ss_pred             hHHeEEEEEEecccCeEEEEEEEC-CCCCEEEEEEEeHHHcchhh---------------------hHHHHHHHHHHHHH
Confidence            468999999999999999999964 68999999999531110000                     00112222345677


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++|||||++++++.+++  .+|++|||+.||++         +++..+..++.||+.||.|||+++   |+||||||
T Consensus       246 l~~~~HP~IV~l~~~f~~~~--~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKP  320 (689)
T 3v5w_A          246 VSTGDCPFIVCMSYAFHTPD--KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKP  320 (689)
T ss_dssp             HSSSCCTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSG
T ss_pred             HhhCCCCCEeEEEEEEEECC--EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCch
Confidence            78889999999999999887  79999999999865         566667789999999999999999   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-cccCccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      +|||++.+|.+||+|||+|+......    ..+.+||+.|||||++.+ ..|+.++|+| +||++|||++|.+||.....
T Consensus       321 eNILld~~G~vKL~DFGlA~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~  396 (689)
T 3v5w_A          321 ANILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT  396 (689)
T ss_dssp             GGEEECTTSCEEECCCTTCEECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC
T ss_pred             HHeEEeCCCCEEecccceeeecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence            99999999999999999998765432    345799999999999964 5799999999 99999999999999854322


Q ss_pred             ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 046907          276 HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPN-----SKDVRR  338 (345)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt-----~~~ll~  338 (345)
                      .    +..............       .+..    ....+.+||..||+.||.+|++     +.+|++
T Consensus       397 ~----~~~~i~~~i~~~~~~-------~p~~----~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          397 K----DKHEIDRMTLTMAVE-------LPDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             C----CHHHHHHHHHHCCCC-------CCTT----SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             H----HHHHHHHhhcCCCCC-------CCcc----CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            1    112222222211111       0111    1234678899999999999998     577653


No 20 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=2.6e-44  Score=325.08  Aligned_cols=266  Identities=26%  Similarity=0.431  Sum_probs=215.6

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ....++|++.+.||+|+||.||+|+++  +|..||||.+......                           ..+.+.+|
T Consensus        35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~---------------------------~~~~~~~E   85 (321)
T 2qkw_B           35 EEATNNFDHKFLIGHGVFGKVYKGVLR--DGAKVALKRRTPESSQ---------------------------GIEEFETE   85 (321)
T ss_dssp             CCCCCCCSCCCCSCBCSSSEEEEEECT--TCCEEEEEECCSCCSS---------------------------HHHHHHHH
T ss_pred             HHHHhccCccceeecCCCeeEEEEEEC--CCCEEEEEEecccChH---------------------------HHHHHHHH
Confidence            447789999999999999999999864  6899999988654221                           25567899


Q ss_pred             HHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-------------CCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          124 INTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------LDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      +.+++.++||||+++++++..++  .++++++++.++++             +++..+..++.|++.||.|||+.+   +
T Consensus        86 ~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i  160 (321)
T 2qkw_B           86 IETLSFCRHPHLVSLIGFCDERN--EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---I  160 (321)
T ss_dssp             HHGGGSCCCTTBCCEEEECCCTT--CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             HHHHHhCCCCCEeeEEEEEcCCC--eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---e
Confidence            99999999999999999987765  67888999877543             677788999999999999999998   9


Q ss_pred             EecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCC
Q 046907          191 IHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP  269 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p  269 (345)
                      +||||||+||+++.++.+||+|||++................||+.|+|||.+.+..++.++||| +|+++|||++|..|
T Consensus       161 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p  240 (321)
T 2qkw_B          161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA  240 (321)
T ss_dssp             ECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTT
T ss_pred             ecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCc
Confidence            99999999999999999999999999875433222223445789999999999988999999999 99999999999999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      |....... ......+..............++.......++....+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l  314 (321)
T 2qkw_B          241 IVQSLPRE-MVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL  314 (321)
T ss_dssp             CSCSSSSS-CCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccccCcHH-HHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            86543322 223333333333333444445555556677888999999999999999999999999999999763


No 21 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=5e-45  Score=329.98  Aligned_cols=270  Identities=23%  Similarity=0.285  Sum_probs=204.5

Q ss_pred             hhhhhhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 046907           37 KAKDLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKK  116 (345)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (345)
                      ..+...+..+.++|++.+.||+|+||.||+|++   .++.||||.+....                            ..
T Consensus        13 ~~~~~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~----------------------------~~   61 (322)
T 3soc_A           13 DLGTENLYFQSMPLQLLEVKARGRFGCVWKAQL---LNEYVAVKIFPIQD----------------------------KQ   61 (322)
T ss_dssp             -CCCCCEEETTEEEEEEEEEECSTTCEEEEEEE---TTEEEEEEEECGGG----------------------------HH
T ss_pred             ccCccccccchhhchhhheecccCceEEEEEEE---CCCEEEEEEeecCc----------------------------hH
Confidence            344555667888999999999999999999986   47899999985321                            11


Q ss_pred             HHHHHHHHHHHhhccCCCccceeEEEecCC--cceeeeeccccCCCCC--------CCHHHHHHHHHHHHHHHHHHhhc-
Q 046907          117 MRQIQSEINTVGQIRHRNLHPLLAHVTRPD--CHLLYILNDVSQGRRE--------LDWLARHRIALGLACGLEYLHMH-  185 (345)
Q Consensus       117 ~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~l~~~~~~~~~~~~--------l~~~~~~~i~~~i~~~l~~lh~~-  185 (345)
                      ......|+.+++.++||||+++++++..++  ...+++++++++++++        +++..+..++.|++.||.|||+. 
T Consensus        62 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~  141 (322)
T 3soc_A           62 SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDI  141 (322)
T ss_dssp             HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred             HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence            334456899999999999999999988755  3357899999988755        56677789999999999999998 


Q ss_pred             ---------CCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-----cccCcc
Q 046907          186 ---------HCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-----LTLTEK  251 (345)
Q Consensus       186 ---------~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-----~~~~~~  251 (345)
                               +   ++||||||+|||++.++.+||+|||++................||+.|+|||.+.+     ..++.+
T Consensus       142 ~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  218 (322)
T 3soc_A          142 PGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLR  218 (322)
T ss_dssp             EEETTEEECE---EECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHH
T ss_pred             cccccccCCC---EEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCcc
Confidence                     8   99999999999999999999999999987755443333445689999999999987     356678


Q ss_pred             chhh-HHHHHHHHHhCCCCCcccccccchh---------hHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhh
Q 046907          252 CDIY-FGALLAGLVMGKLPSDKFFQHTNEM---------SFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACF  321 (345)
Q Consensus       252 ~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  321 (345)
                      +||| +|+++|||++|..||..........         ...... ................   ........+.++|.+
T Consensus       219 ~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~  294 (322)
T 3soc_A          219 IDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQ-EVVVHKKKRPVLRDYW---QKHAGMAMLCETIEE  294 (322)
T ss_dssp             HHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHH-HHHTTSCCCCCCCGGG---GSSHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhh-hhhhcccCCCCccccc---cccchHHHHHHHHHH
Confidence            9999 9999999999999986532211000         111111 1111111111111111   112445668899999


Q ss_pred             ccCCCCCCCCCHHHHHHHHhhhh
Q 046907          322 CTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       322 Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ||+.||++|||+.+|++.|++|+
T Consensus       295 cl~~dP~~Rps~~ell~~L~~l~  317 (322)
T 3soc_A          295 CWDHDAEARLSAGCVGERITQMQ  317 (322)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HccCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999999999985


No 22 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.2e-44  Score=327.88  Aligned_cols=275  Identities=32%  Similarity=0.550  Sum_probs=222.1

Q ss_pred             hhhhhhhhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 046907           35 IKKAKDLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN  114 (345)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (345)
                      ....+..++....++|++.+.||+|+||.||+|+++  +|..||||.+......                          
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~--------------------------   68 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA--DGTLVAVKRLKEERTQ--------------------------   68 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS--SSCCEEEEECCC------------------------------
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEec--CCCEEEEEEeccccCc--------------------------
Confidence            344455567778999999999999999999999854  7899999999653211                          


Q ss_pred             HHHHHHHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-------------CCHHHHHHHHHHHHHHHHH
Q 046907          115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------LDWLARHRIALGLACGLEY  181 (345)
Q Consensus       115 ~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------l~~~~~~~i~~~i~~~l~~  181 (345)
                      .....+.+|+.+++.++||||+++++++..++  ..+++++++.++++             +++..+..++.|++.||.|
T Consensus        69 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~  146 (326)
T 3uim_A           69 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY  146 (326)
T ss_dssp             -CCCHHHHHHHGGGTCCCTTBCCCCEEECCSS--CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhccCCCccceEEEEecCC--ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHH
Confidence            11235788999999999999999999998776  56788999887543             6777888999999999999


Q ss_pred             Hhhc---CCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HH
Q 046907          182 LHMH---HCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FG  257 (345)
Q Consensus       182 lh~~---~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG  257 (345)
                      ||+.   +   ++||||||+||+++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||| +|
T Consensus       147 lH~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  222 (326)
T 3uim_A          147 LHDHCDPK---IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYG  222 (326)
T ss_dssp             HHHSSSSC---EECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSC-EECCCCSCGGGCCHHHHHHSEECHHHHHHHHH
T ss_pred             HHhCCCCC---eEeCCCchhhEEECCCCCEEeccCccccccCccccc-ccccccCCcCccCHHHhccCCCCccccchhHH
Confidence            9999   7   999999999999999999999999999876543322 23446699999999999988899999999 99


Q ss_pred             HHHHHHHhCCCCCcccc-cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 046907          258 ALLAGLVMGKLPSDKFF-QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV  336 (345)
Q Consensus       258 ~vl~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~l  336 (345)
                      +++|+|++|..||.... ..........++.............+........++....+.+++..||+.||.+|||+.+|
T Consensus       223 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el  302 (326)
T 3uim_A          223 VMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV  302 (326)
T ss_dssp             HHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred             HHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHH
Confidence            99999999999985322 22233345555555555555555556666667788889999999999999999999999999


Q ss_pred             HHHHhhh
Q 046907          337 RRMLSQI  343 (345)
Q Consensus       337 l~~L~~l  343 (345)
                      ++.|++.
T Consensus       303 l~~L~~~  309 (326)
T 3uim_A          303 VRMLEGD  309 (326)
T ss_dssp             HHHHHTS
T ss_pred             HHHhcCc
Confidence            9999864


No 23 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=7.3e-44  Score=328.33  Aligned_cols=253  Identities=25%  Similarity=0.349  Sum_probs=201.6

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecC------CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPG------QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKM  117 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (345)
                      ....++|++.+.||+|+||.||+|++.+      .++..||||.+.....                          ....
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~  130 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT--------------------------EKDL  130 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB--------------------------HHHH
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC--------------------------HHHH
Confidence            3456789999999999999999998632      3467899999965321                          2235


Q ss_pred             HHHHHHHHHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC-------------------------CCHHHHHHH
Q 046907          118 RQIQSEINTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------------------LDWLARHRI  171 (345)
Q Consensus       118 ~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------------------l~~~~~~~i  171 (345)
                      ..+.+|+.+++.+ +||||+++++++..++  .++++++|+.++++                         +++.....+
T Consensus       131 ~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  208 (370)
T 2psq_A          131 SDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC  208 (370)
T ss_dssp             HHHHHHHHHHHHSCCCTTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCEeeEEEEEccCC--CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHH
Confidence            6788999999999 8999999999988766  68889999988654                         455667789


Q ss_pred             HHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCcc
Q 046907          172 ALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEK  251 (345)
Q Consensus       172 ~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~  251 (345)
                      +.|++.||.|||+.+   ++||||||+|||++.++.+||+|||++................+|+.|+|||++.+..++.+
T Consensus       209 ~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  285 (370)
T 2psq_A          209 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ  285 (370)
T ss_dssp             HHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHH
T ss_pred             HHHHHHHHHHHHhCC---eeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcH
Confidence            999999999999999   99999999999999999999999999987655433333344567889999999999899999


Q ss_pred             chhh-HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCC
Q 046907          252 CDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNE  329 (345)
Q Consensus       252 ~Dvw-lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~  329 (345)
                      +||| ||+++|||++ |..||...    ...+....+........             +..+...+.++|..||+.||++
T Consensus       286 ~DvwslG~il~ellt~g~~p~~~~----~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~li~~~l~~dP~~  348 (370)
T 2psq_A          286 SDVWSFGVLMWEIFTLGGSPYPGI----PVEELFKLLKEGHRMDK-------------PANCTNELYMMMRDCWHAVPSQ  348 (370)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTC----CGGGHHHHHHTTCCCCC-------------CTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCC----CHHHHHHHHhcCCCCCC-------------CCCCCHHHHHHHHHHcCCChhh
Confidence            9999 9999999999 99997542    33334433332221111             1122335788999999999999


Q ss_pred             CCCHHHHHHHHhhhh
Q 046907          330 RPNSKDVRRMLSQIQ  344 (345)
Q Consensus       330 Rpt~~~ll~~L~~l~  344 (345)
                      |||+.++++.|+++.
T Consensus       349 Rpt~~ell~~L~~il  363 (370)
T 2psq_A          349 RPTFKQLVEDLDRIL  363 (370)
T ss_dssp             SCCHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHH
Confidence            999999999999873


No 24 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=7.9e-44  Score=320.27  Aligned_cols=253  Identities=26%  Similarity=0.386  Sum_probs=192.0

Q ss_pred             HHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           43 FLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQS  122 (345)
Q Consensus        43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (345)
                      +....++|++.+.||+|+||.||+|++   +|..||||.+......                         ....+.+.+
T Consensus        32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~---~~~~vavK~~~~~~~~-------------------------~~~~~~~~~   83 (309)
T 3p86_A           32 MDIPWCDLNIKEKIGAGSFGTVHRAEW---HGSDVAVKILMEQDFH-------------------------AERVNEFLR   83 (309)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEE---TTEEEEEEEECCCCCS-------------------------HHHHHHHHH
T ss_pred             ccCChhHceeeeEeecCCCeEEEEEEE---CCCcEEEEEecCCCCC-------------------------HHHHHHHHH
Confidence            345678999999999999999999986   5888999999765433                         223567889


Q ss_pred             HHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC------------CCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          123 EINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE------------LDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       123 E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~------------l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      |+.++++++||||+++++++..++  .++++++++.++++            +++..+..++.|++.||.|||+.+ .++
T Consensus        84 E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~i  160 (309)
T 3p86_A           84 EVAIMKRLRHPNIVLFMGAVTQPP--NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPI  160 (309)
T ss_dssp             HHHHHHHCCCTTBCCEEEEECSTT--CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCC
T ss_pred             HHHHHHhCCCCCEeeEEEEEEECC--ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCE
Confidence            999999999999999999998766  58899999988654            566677889999999999999986 349


Q ss_pred             EecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCC
Q 046907          191 IHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP  269 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p  269 (345)
                      +||||||+||+++.++.+||+|||++........  ......||+.|+|||.+.+..++.++||| +|+++|+|++|..|
T Consensus       161 vH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~P  238 (309)
T 3p86_A          161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP  238 (309)
T ss_dssp             CCTTCCGGGEEECTTCCEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCT
T ss_pred             ECCCCChhhEEEeCCCcEEECCCCCCcccccccc--ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999975433221  22346789999999999999999999999 99999999999999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      |...    ...+....+........            .+......+.+++..||+.||.+|||+.++++.|+.+.
T Consensus       239 f~~~----~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~  297 (309)
T 3p86_A          239 WGNL----NPAQVVAAVGFKCKRLE------------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI  297 (309)
T ss_dssp             TTTS----CHHHHHHHHHHSCCCCC------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCC----CHHHHHHHHHhcCCCCC------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            7542    22222222211111110            11112234778999999999999999999999999874


No 25 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=2.7e-44  Score=332.09  Aligned_cols=254  Identities=24%  Similarity=0.330  Sum_probs=201.9

Q ss_pred             hHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           42 AFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      .|..+.++|.+.+.||+|+||.||+|+++ .++..||||.+.....                          ......+.
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~  160 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLR-ADNTLVAVKSCRETLP--------------------------PDLKAKFL  160 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEECCTTSC--------------------------HHHHTTTT
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEe-cCCeEEEEEEccccCC--------------------------HHHHHHHH
Confidence            57778899999999999999999999975 4789999999864321                          12245678


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +|+.+++.++||||+++++++..++  .+++++|+++++++          +++.....++.|++.||.|||+.+   ++
T Consensus       161 ~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---iv  235 (377)
T 3cbl_A          161 QEARILKQYSHPNIVRLIGVCTQKQ--PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI  235 (377)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             HHHHHHHhCCCCCEEEEEEEEecCC--CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cC
Confidence            8999999999999999999997765  68899999988654          556667789999999999999999   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLP  269 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p  269 (345)
                      ||||||+|||++.++.+||+|||+++...............++..|+|||.+.+..++.++||| ||+++|||++ |..|
T Consensus       236 HrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p  315 (377)
T 3cbl_A          236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP  315 (377)
T ss_dssp             CSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             CcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999865433221111223457789999999988899999999 9999999998 9999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      |...    ...+....+......+.+             ..+...+.++|..||+.||++|||+.++++.|+++.
T Consensus       316 ~~~~----~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          316 YPNL----SNQQTREFVEKGGRLPCP-------------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             STTS----CHHHHHHHHHTTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCC----CHHHHHHHHHcCCCCCCC-------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            6542    333333333322211111             112234778899999999999999999999999885


No 26 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=2e-43  Score=317.34  Aligned_cols=267  Identities=21%  Similarity=0.348  Sum_probs=195.9

Q ss_pred             ccchhhhhhhhhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHH
Q 046907           31 FSPLIKKAKDLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSE  110 (345)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (345)
                      ..|.........|....++|++.+.||+|+||.||+|+++    ..+|+|.++....+                      
T Consensus        19 ~~P~~~~~~~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~avk~~k~~~~~----------------------   72 (307)
T 3lb7_A           19 IRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWH----GDVAVKILKVVDPT----------------------   72 (307)
T ss_dssp             ----------CCCBCCTTSCCEEEEEEECSSCEEEEEESS----SEEEEEECCCSSCC----------------------
T ss_pred             cCCCCCcCcCceEEecccceEEEeEecCCCCeEEEEEEEC----CEEEEEEEecCCCC----------------------
Confidence            3455555666667889999999999999999999999853    35889988654332                      


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHH
Q 046907          111 MLLNKKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLE  180 (345)
Q Consensus       111 ~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~  180 (345)
                         ....+.+.+|+.+++.++||||+++++++..++   ++++++++.++++          +++..+..++.|++.||.
T Consensus        73 ---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~  146 (307)
T 3lb7_A           73 ---PEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN---LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMD  146 (307)
T ss_dssp             ---HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS---CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCc---EEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence               233567889999999999999999999876543   7788999987543          666778899999999999


Q ss_pred             HHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccc---ccccCccchhh-H
Q 046907          181 YLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ---MLTLTEKCDIY-F  256 (345)
Q Consensus       181 ~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~---~~~~~~~~Dvw-l  256 (345)
                      |||+.+   ++||||||+||+++.++.+||+|||++................||+.|+|||.+.   +..++.++||| +
T Consensus       147 ~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~sl  223 (307)
T 3lb7_A          147 YLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSY  223 (307)
T ss_dssp             HHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHH
T ss_pred             HHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHH
Confidence            999999   9999999999999999999999999997654322222334567999999999986   55688899999 9


Q ss_pred             HHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 046907          257 GALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV  336 (345)
Q Consensus       257 G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~l  336 (345)
                      |+++|||++|..||....   ........+......+...         .....+...+.+++..||+.||++|||+.++
T Consensus       224 G~il~elltg~~Pf~~~~---~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i  291 (307)
T 3lb7_A          224 GIVLYELMTGELPYSHIN---NRDQIIFMVGRGYASPDLS---------KLYKNCPKAMKRLVADCVKKVKEERPLFPQI  291 (307)
T ss_dssp             HHHHHHHHHSSCTTTTCC---CHHHHHHHHHHTCCCCCST---------TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHH
T ss_pred             HHHHHHHHhCCCCCccCC---cHHHHHHHHhcCCCCcchh---------hhhcCCcHHHHHHHHHHhhCChhhCcCHHHH
Confidence            999999999999975432   2222222222222111111         1111223457788999999999999999999


Q ss_pred             HHHHhhhh
Q 046907          337 RRMLSQIQ  344 (345)
Q Consensus       337 l~~L~~l~  344 (345)
                      ++.|+.++
T Consensus       292 l~~l~~l~  299 (307)
T 3lb7_A          292 LSSIELLQ  299 (307)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999885


No 27 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.9e-43  Score=324.15  Aligned_cols=260  Identities=22%  Similarity=0.318  Sum_probs=204.9

Q ss_pred             hhhhHHhhcCCcccccccccCcceeeEEEEec----CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 046907           39 KDLAFLEKKGGLASLEKIGSGGCGEVYKAELP----GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN  114 (345)
Q Consensus        39 ~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (345)
                      ...+|....++|++.+.||+|+||.||+|++.    ..+++.||||.+.....                          .
T Consensus        13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~   66 (359)
T 3vhe_A           13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--------------------------H   66 (359)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--------------------------H
T ss_pred             CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC--------------------------H
Confidence            34567788999999999999999999999853    34678999999964321                          1


Q ss_pred             HHHHHHHHHHHHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC-------------------------------
Q 046907          115 KKMRQIQSEINTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------------------------  162 (345)
Q Consensus       115 ~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------------------------  162 (345)
                      .....+.+|+.++..+ +||||+++++++..++. .++++++|+.++++                               
T Consensus        67 ~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~-~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (359)
T 3vhe_A           67 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI  145 (359)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS-CCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------
T ss_pred             HHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC-ceEEEEEecCCCcHHHHHHhccccccccccccchhhccccccccc
Confidence            2356788999999999 89999999999887653 57888899887543                               


Q ss_pred             --------------------------------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 046907          163 --------------------------------------------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPV  198 (345)
Q Consensus       163 --------------------------------------------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~  198 (345)
                                                                  +++.....++.|++.||.|||+.+   ++||||||+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~  222 (359)
T 3vhe_A          146 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAAR  222 (359)
T ss_dssp             --------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGG
T ss_pred             chhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChh
Confidence                                                        667778889999999999999999   999999999


Q ss_pred             CeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCCCCcccccc
Q 046907          199 NVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQH  276 (345)
Q Consensus       199 nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p~~~~~~~  276 (345)
                      ||+++.++.+||+|||++................||+.|+|||++.+..++.++||| +|+++|||++ |..||....  
T Consensus       223 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--  300 (359)
T 3vhe_A          223 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--  300 (359)
T ss_dssp             GEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC--
T ss_pred             hEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc--
Confidence            999999999999999999876544333344556789999999999998999999999 9999999998 999975422  


Q ss_pred             cchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                       ........+........+             ......+.+++..||+.||.+|||+.++++.|+++.
T Consensus       301 -~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          301 -IDEEFCRRLKEGTRMRAP-------------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             -CSHHHHHHHHHTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -hhHHHHHHHHcCCCCCCC-------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence             122333333322211111             111234778889999999999999999999999874


No 28 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=6.4e-43  Score=314.33  Aligned_cols=249  Identities=23%  Similarity=0.428  Sum_probs=197.8

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|.+.+.||+|+||.||+|++. .+++.||+|.+....                           ....+.+.+|+.
T Consensus         8 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~~va~K~~~~~~---------------------------~~~~~~~~~E~~   59 (310)
T 3s95_A            8 RPSDLIHGEVLGKGCFGQAIKVTHR-ETGEVMVMKELIRFD---------------------------EETQRTFLKEVK   59 (310)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEESCCC---------------------------HHHHHHHHHHHH
T ss_pred             ChhHeeccceecCCCCEEEEEEEEC-CCCcEEEEEEeccCC---------------------------HHHHHHHHHHHH
Confidence            5679999999999999999999964 579999999985432                           233567889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++.++||||+++++++..++  .++++++++.+++          .+++..+..++.|++.||.|||+.+   ++||||
T Consensus        60 ~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dl  134 (310)
T 3s95_A           60 VMRCLEHPNVLKFIGVLYKDK--RLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDL  134 (310)
T ss_dssp             HHTTCCCTTBCCEEEEEEETT--EEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred             HHHhCCCcCcccEEEEEecCC--eeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCC
Confidence            999999999999999998776  6889999998854          3667778899999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcce------------eccCcccCccccccccccccccCccchhh-HHHHHHH
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHI------------TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAG  262 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~------------~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~e  262 (345)
                      ||+||+++.++.+||+|||++..........            ......||+.|+|||.+.+..++.++||| +|+++||
T Consensus       135 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~e  214 (310)
T 3s95_A          135 NSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCE  214 (310)
T ss_dssp             STTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             CcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHH
Confidence            9999999999999999999998764432211            11246799999999999999999999999 9999999


Q ss_pred             HHhCCCCCcccccccchh--hHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 046907          263 LVMGKLPSDKFFQHTNEM--SFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRML  340 (345)
Q Consensus       263 l~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L  340 (345)
                      |++|..||..........  ........    ..+.             .....+.+++..||+.||++|||+.++++.|
T Consensus       215 l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------------~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L  277 (310)
T 3s95_A          215 IIGRVNADPDYLPRTMDFGLNVRGFLDR----YCPP-------------NCPPSFFPITVRCCDLDPEKRPSFVKLEHWL  277 (310)
T ss_dssp             HHHTCCSSTTTSCBCTTSSBCHHHHHHH----TCCT-------------TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HhcCCCCCcchhhhHHHHhhhhhccccc----cCCC-------------CCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            999999976543322111  11111111    1110             1112378899999999999999999999999


Q ss_pred             hhhh
Q 046907          341 SQIQ  344 (345)
Q Consensus       341 ~~l~  344 (345)
                      ++++
T Consensus       278 ~~l~  281 (310)
T 3s95_A          278 ETLR  281 (310)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9874


No 29 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=6.8e-43  Score=312.43  Aligned_cols=243  Identities=24%  Similarity=0.340  Sum_probs=193.4

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+. ..+|+.||+|.+......                           ..+.+.+|+.
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~~~~~---------------------------~~~~~~~E~~   69 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMD-VATGQEVAIRQMNLQQQP---------------------------KKELIINEIL   69 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEB-TTTCCEEEEEEEEGGGCS---------------------------CHHHHHHHHH
T ss_pred             hhhceeeeeeeccCCCeEEEEEEE-CCCCcEEEEEEeeccccc---------------------------HHHHHHHHHH
Confidence            456899999999999999999985 357999999998532211                           1345778999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC--------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE--------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~--------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +++.++||||+++++++..++  .+++++|++.++++        ++......++.|++.||.|||+.+   ++||||||
T Consensus        70 ~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp  144 (297)
T 3fxz_A           70 VMRENKNPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKS  144 (297)
T ss_dssp             HHHHCCCTTBCCEEEEEEETT--EEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred             HHhcCCCCCCCeEeEEEEECC--EEEEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCH
Confidence            999999999999999998776  68999999988765        566677899999999999999999   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQH  276 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~  276 (345)
                      +||+++.++.+||+|||++........  ......||+.|+|||.+.+..++.++||| +|+++|+|++|..||...   
T Consensus       145 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~---  219 (297)
T 3fxz_A          145 DNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE---  219 (297)
T ss_dssp             GGEEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS---
T ss_pred             HHEEECCCCCEEEeeCCCceecCCccc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC---
Confidence            999999999999999999987654332  23456899999999999999999999999 999999999999997432   


Q ss_pred             cchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                       +.......+...   ..+...        ........+.+++..||+.||++|||+.++++
T Consensus       220 -~~~~~~~~~~~~---~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          220 -NPLRALYLIATN---GTPELQ--------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             -CHHHHHHHHHHH---CSCCCS--------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -CHHHHHHHHHhC---CCCCCC--------CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence             222222222211   111100        11122344788999999999999999999976


No 30 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.9e-42  Score=312.52  Aligned_cols=265  Identities=15%  Similarity=0.198  Sum_probs=205.6

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|++. .+++.||||.+......                          ...+.+.+|+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~E~~   59 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFL--------------------------RPVDVQMREFE   59 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECGGGGG--------------------------SCHHHHHHHHH
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEEC-CCCcEEEEEEecccccc--------------------------chHHHHHHHHH
Confidence            3468999999999999999999965 57999999998642211                          11455678999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE------------LDWLARHRIALGLACGLEYLHMHHCPRIIHR  193 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~------------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~  193 (345)
                      ++++++||||+++++++...+...++++++++.++++            +++..+..++.|++.||.|||+.+   ++||
T Consensus        60 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~  136 (319)
T 4euu_A           60 VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHR  136 (319)
T ss_dssp             HHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECS
T ss_pred             HHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecC
Confidence            9999999999999999988776788999999987643            677888899999999999999999   9999


Q ss_pred             CCCCCCeee----cCCCCeEEeccccceecCCCCcceeccCcccCcccccccccc--------ccccCccchhh-HHHHH
Q 046907          194 DLNPVNVLL----DDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ--------MLTLTEKCDIY-FGALL  260 (345)
Q Consensus       194 dlk~~nil~----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~--------~~~~~~~~Dvw-lG~vl  260 (345)
                      ||||+||++    +.++.+||+|||++........   .....||..|+|||.+.        +..++.++||| +|+++
T Consensus       137 Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il  213 (319)
T 4euu_A          137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF  213 (319)
T ss_dssp             CCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHH
T ss_pred             CCCHHHEEEeccCCCCceEEEccCCCceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHH
Confidence            999999999    7778899999999987654332   23467999999999986        46788999999 99999


Q ss_pred             HHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCcc---------ccc--cccCCCcHHHHHHHHHHHhhccCCCCCC
Q 046907          261 AGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRA---------IDS--KLVGNGCEEQMLLVLKIACFCTLEDPNE  329 (345)
Q Consensus       261 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~~~~~~~~l~~li~~Cl~~dp~~  329 (345)
                      |||++|..||...............+........+...         ...  +............+.+++..||+.||++
T Consensus       214 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  293 (319)
T 4euu_A          214 YHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEK  293 (319)
T ss_dssp             HHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTT
T ss_pred             HHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhh
Confidence            99999999986544433333333333322211111100         000  1112344667778999999999999999


Q ss_pred             CCCHHHHHHHHhhh
Q 046907          330 RPNSKDVRRMLSQI  343 (345)
Q Consensus       330 Rpt~~~ll~~L~~l  343 (345)
                      |||+.|+++...+-
T Consensus       294 R~s~~ell~h~~d~  307 (319)
T 4euu_A          294 CWGFDQFFAETSDI  307 (319)
T ss_dssp             SCCHHHHHHHHHHH
T ss_pred             hccHHHhhhccHHH
Confidence            99999999887653


No 31 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=8.4e-43  Score=315.98  Aligned_cols=241  Identities=22%  Similarity=0.337  Sum_probs=193.5

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|++. .+|+.||||.+.....+                         .....++.+|+.
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~~E~~   66 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHI-LTGREVAIKIIDKTQLN-------------------------PTSLQKLFREVR   66 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSC-------------------------HHHHHHHHHHHH
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhhcCC-------------------------HHHHHHHHHHHH
Confidence            4679999999999999999999864 57999999998643221                         233567889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++..++  .+++++++++++++         ++......++.|++.||.|||+.+   ++|||||
T Consensus        67 ~l~~l~hpnIv~l~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlk  141 (328)
T 3fe3_A           67 IMKILNHPNIVKLFEVIETEK--TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLK  141 (328)
T ss_dssp             HHHHCCCTTBCCEEEEEECSS--EEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCC
T ss_pred             HHHhCCCCCEeeEEEEEEECC--EEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCC
Confidence            999999999999999998776  78999999988654         556667789999999999999998   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccC-ccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLT-EKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~-~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      |+||+++.++.+||+|||++.......   ......||+.|+|||.+.+..+. .++||| +|+++|+|++|..||..  
T Consensus       142 p~NIll~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--  216 (328)
T 3fe3_A          142 AENLLLDADMNIKIADFGFSNEFTVGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--  216 (328)
T ss_dssp             GGGEEECTTSCEEECSTTCCGGGSSSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC--
T ss_pred             HHHEEEcCCCCEEEeeccCceecCCCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC--
Confidence            999999999999999999997654432   23457899999999999988865 799999 99999999999999753  


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                        .+.......+....   ..       .+    ......+.+++..||+.||.+|||+.++++
T Consensus       217 --~~~~~~~~~i~~~~---~~-------~p----~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          217 --QNLKELRERVLRGK---YR-------IP----FYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             --SSHHHHHHHHHHCC---CC-------CC----TTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             --CCHHHHHHHHHhCC---CC-------CC----CCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              23333333332221   11       00    011234678889999999999999999975


No 32 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=2.8e-43  Score=314.37  Aligned_cols=259  Identities=19%  Similarity=0.302  Sum_probs=196.2

Q ss_pred             hcCCcccccccccCcceeeEEEEe---cCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAEL---PGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQS  122 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (345)
                      ..++|++++.||+|+||.||+|++   +..+++.||||.+....                           ....+.+.+
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---------------------------~~~~~~~~~   60 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------------------EEHLRDFER   60 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC---------------------------HHHHHHHHH
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC---------------------------HHHHHHHHH
Confidence            467999999999999999999985   34578999999996532                           223567889


Q ss_pred             HHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 046907          123 EINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRIIH  192 (345)
Q Consensus       123 E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH  192 (345)
                      |+.+++.++||||+++++++...+...+++++++++++++          +++.....++.|++.||.|||+.+   ++|
T Consensus        61 E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH  137 (295)
T 3ugc_A           61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIH  137 (295)
T ss_dssp             HHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred             HHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC---ccc
Confidence            9999999999999999999877665578999999987654          666777889999999999999998   999


Q ss_pred             cCCCCCCeeecCCCCeEEeccccceecCCCCcc-eeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCC
Q 046907          193 RDLNPVNVLLDDDIEARISGFGFARAIPDAHTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPS  270 (345)
Q Consensus       193 ~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~  270 (345)
                      |||||+||+++.++.+||+|||++......... .......++..|+|||.+.+..++.++||| +|+++|+|++|..||
T Consensus       138 ~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~  217 (295)
T 3ugc_A          138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS  217 (295)
T ss_dssp             SCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTT
T ss_pred             CCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhccccc
Confidence            999999999999999999999999876443221 122335677889999999999999999999 999999999999997


Q ss_pred             cccccc---------cchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 046907          271 DKFFQH---------TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLS  341 (345)
Q Consensus       271 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~  341 (345)
                      ......         ...................          ..+......+.+++..||+.||++|||+.++++.|+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~  287 (295)
T 3ugc_A          218 KSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL----------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD  287 (295)
T ss_dssp             CSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCC----------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             CCChHHHHhhhcCccccchhHHHHHHHHhccCcC----------CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence            532210         0001111111111111111          111222345788999999999999999999999999


Q ss_pred             hhh
Q 046907          342 QIQ  344 (345)
Q Consensus       342 ~l~  344 (345)
                      ++.
T Consensus       288 ~l~  290 (295)
T 3ugc_A          288 QIR  290 (295)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            885


No 33 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.2e-42  Score=305.96  Aligned_cols=248  Identities=22%  Similarity=0.351  Sum_probs=198.1

Q ss_pred             hhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      ...++|++.+.||+|+||.||+|+++  ++..||+|.+......                            ...+.+|+
T Consensus         5 l~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~----------------------------~~~~~~E~   54 (268)
T 3sxs_A            5 LKREEITLLKELGSGQFGVVKLGKWK--GQYDVAVKMIKEGSMS----------------------------EDEFFQEA   54 (268)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET--TTEEEEEEEECBTTBC----------------------------HHHHHHHH
T ss_pred             echhheeeeeeeccCCCceEEEEEec--CceeEEEEEeccCCCc----------------------------HHHHHHHH
Confidence            45679999999999999999999875  6778999999654322                            34577899


Q ss_pred             HHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          125 NTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       125 ~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      .+++.++||||+++++++..++  .+++++++++++++          +++..+..++.|++.||.|||+.+   ++|||
T Consensus        55 ~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~d  129 (268)
T 3sxs_A           55 QTMMKLSHPKLVKFYGVCSKEY--PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRD  129 (268)
T ss_dssp             HHHHHCCCTTBCCEEEEECSSS--SEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESS
T ss_pred             HHHHhCCCCCEeeEEEEEccCC--ceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCC
Confidence            9999999999999999987665  68899999987643          667777899999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCCCCcc
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDK  272 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p~~~  272 (345)
                      |||+||+++.++.++|+|||++......... ......+|+.|+|||.+.+..++.++||| +|+++|+|++ |..||..
T Consensus       130 ikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  208 (268)
T 3sxs_A          130 LAARNCLVDRDLCVKVSDFGMTRYVLDDQYV-SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL  208 (268)
T ss_dssp             CSGGGEEECTTCCEEECCTTCEEECCTTCEE-ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             cCcceEEECCCCCEEEccCccceecchhhhh-cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccc
Confidence            9999999999999999999999876544322 22345667889999999998899999999 9999999999 9999753


Q ss_pred             cccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhhC
Q 046907          273 FFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQH  345 (345)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~~  345 (345)
                      .    ........+........+          ..   ....+.+++..||+.||++|||+.++++.|+++.+
T Consensus       209 ~----~~~~~~~~~~~~~~~~~~----------~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          209 Y----TNSEVVLKVSQGHRLYRP----------HL---ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             S----CHHHHHHHHHTTCCCCCC----------TT---SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             c----ChHHHHHHHHcCCCCCCC----------Cc---ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            2    222222222221111111          11   12347788999999999999999999999999863


No 34 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=8.1e-43  Score=322.82  Aligned_cols=256  Identities=26%  Similarity=0.348  Sum_probs=204.5

Q ss_pred             hhHHhhcCCcccccccccCcceeeEEEEecC------CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 046907           41 LAFLEKKGGLASLEKIGSGGCGEVYKAELPG------QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN  114 (345)
Q Consensus        41 ~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (345)
                      ..|....++|++.+.||+|+||.||+|++.+      ..+..||||.+.....                          .
T Consensus        62 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~  115 (382)
T 3tt0_A           62 PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--------------------------E  115 (382)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC--------------------------H
T ss_pred             cccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC--------------------------H
Confidence            3456677899999999999999999998642      2346899999965421                          2


Q ss_pred             HHHHHHHHHHHHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC-------------------------CCHHHH
Q 046907          115 KKMRQIQSEINTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------------------LDWLAR  168 (345)
Q Consensus       115 ~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------------------l~~~~~  168 (345)
                      .....+.+|+.+++.+ +||||+++++++..++  .++++++++.++++                         +++..+
T Consensus       116 ~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  193 (382)
T 3tt0_A          116 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL  193 (382)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCchhhhheeeeccCC--ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHH
Confidence            2356788999999999 9999999999998766  57889999987543                         677788


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc
Q 046907          169 HRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL  248 (345)
Q Consensus       169 ~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~  248 (345)
                      ..++.|++.||.|||+.+   ++||||||+|||++.++.+||+|||++................||+.|+|||.+.+..+
T Consensus       194 ~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  270 (382)
T 3tt0_A          194 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY  270 (382)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCC
T ss_pred             HHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCC
Confidence            899999999999999998   99999999999999999999999999987655433333445677889999999999899


Q ss_pred             Cccchhh-HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCC
Q 046907          249 TEKCDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLED  326 (345)
Q Consensus       249 ~~~~Dvw-lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~d  326 (345)
                      +.++||| +|+++|+|++ |..||..    ....+....+........+             ......+.+++..||+.|
T Consensus       271 ~~~~DiwslG~il~ellt~g~~p~~~----~~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~d  333 (382)
T 3tt0_A          271 THQSDVWSFGVLLWEIFTLGGSPYPG----VPVEELFKLLKEGHRMDKP-------------SNCTNELYMMMRDCWHAV  333 (382)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTT----CCHHHHHHHHHTTCCCCCC-------------SSCCHHHHHHHHHHTCSS
T ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCC----CCHHHHHHHHHcCCCCCCC-------------ccCCHHHHHHHHHHcCCC
Confidence            9999999 9999999999 9999643    2333444433332211111             112234778899999999


Q ss_pred             CCCCCCHHHHHHHHhhhh
Q 046907          327 PNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       327 p~~Rpt~~~ll~~L~~l~  344 (345)
                      |++|||+.+|++.|+++.
T Consensus       334 P~~Rps~~ell~~L~~~~  351 (382)
T 3tt0_A          334 PSQRPTFKQLVEDLDRIV  351 (382)
T ss_dssp             GGGSCCHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHH
Confidence            999999999999999873


No 35 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3.7e-43  Score=309.46  Aligned_cols=250  Identities=22%  Similarity=0.336  Sum_probs=199.6

Q ss_pred             hHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           42 AFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      .|..+.++|++.+.||+|+||.||+|++.  ++..||+|.+......                            .+.+.
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~----------------------------~~~~~   53 (269)
T 4hcu_A            4 KWVIDPSELTFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREGAMS----------------------------EEDFI   53 (269)
T ss_dssp             -CBCCGGGEEEEEEEEECSSCEEEEEEET--TTEEEEEEEECTTSBC----------------------------HHHHH
T ss_pred             cEEeChhhceeeheecCCCccEEEEEEec--CCCeEEEEEecccccC----------------------------HHHHH
Confidence            46667889999999999999999999975  6788999999754322                            24577


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +|+.++++++||||+++++++..++  .+++++++++++++          ++......++.|++.||.|||+.+   ++
T Consensus        54 ~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~  128 (269)
T 4hcu_A           54 EEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI  128 (269)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEECSSS--SEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             HHHHHHHhCCCCCEeeEEEEEecCC--ceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            8999999999999999999988766  58899999987543          567778899999999999999999   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLP  269 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p  269 (345)
                      ||||||+||+++.++.++|+|||++........ .......+|..|+|||.+.+..++.++||| +|+++|+|++ |..|
T Consensus       129 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p  207 (269)
T 4hcu_A          129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP  207 (269)
T ss_dssp             CSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             cCCcchheEEEcCCCCEEecccccccccccccc-ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCC
Confidence            999999999999999999999999976543221 122345667889999999988999999999 9999999999 9999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      |..    .........+........+             ......+.+++..||+.||++|||+.++++.|+++.
T Consensus       208 ~~~----~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~  265 (269)
T 4hcu_A          208 YEN----RSNSEVVEDISTGFRLYKP-------------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  265 (269)
T ss_dssp             TTT----CCHHHHHHHHHTTCCCCCC-------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCC----CCHHHHHHHHhcCccCCCC-------------CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence            643    2333333333322111111             111234778899999999999999999999999885


No 36 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=9e-43  Score=313.57  Aligned_cols=258  Identities=21%  Similarity=0.328  Sum_probs=204.8

Q ss_pred             hhhhHHhhcCCcccccccccCcceeeEEEEec----CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 046907           39 KDLAFLEKKGGLASLEKIGSGGCGEVYKAELP----GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN  114 (345)
Q Consensus        39 ~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (345)
                      .+..|....++|.+.+.||+|+||.||+|++.    ..++..||+|.+.....                          .
T Consensus        14 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~   67 (314)
T 2ivs_A           14 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS--------------------------P   67 (314)
T ss_dssp             CCTTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC--------------------------H
T ss_pred             CCcccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC--------------------------H
Confidence            34456667889999999999999999999863    23568999999964321                          2


Q ss_pred             HHHHHHHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC--------------------------------
Q 046907          115 KKMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE--------------------------------  162 (345)
Q Consensus       115 ~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~--------------------------------  162 (345)
                      ...+.+.+|+.+++.++||||+++++++..++  .++++++++.++++                                
T Consensus        68 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (314)
T 2ivs_A           68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER  145 (314)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------C
T ss_pred             HHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--ceEEEEeecCCCCHHHHHHHHhhccCCccccccccccccccccccc
Confidence            23567889999999999999999999987766  58889999987543                                


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccc
Q 046907          163 -LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPE  241 (345)
Q Consensus       163 -l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE  241 (345)
                       +++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++................+|+.|+|||
T Consensus       146 ~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  222 (314)
T 2ivs_A          146 ALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIE  222 (314)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHH
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCC---CcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChh
Confidence             566677889999999999999998   9999999999999999999999999998775544333334456788999999


Q ss_pred             cccccccCccchhh-HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHH
Q 046907          242 YLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIA  319 (345)
Q Consensus       242 ~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  319 (345)
                      .+.+..++.++||| +|+++|+|++ |..||...    ........+........+             ......+.+++
T Consensus       223 ~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~----~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~li  285 (314)
T 2ivs_A          223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI----PPERLFNLLKTGHRMERP-------------DNCSEEMYRLM  285 (314)
T ss_dssp             HHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC----CGGGHHHHHHTTCCCCCC-------------TTCCHHHHHHH
T ss_pred             hhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC----CHHHHHHHhhcCCcCCCC-------------ccCCHHHHHHH
Confidence            99998899999999 9999999999 99997542    333333333322211111             11223477899


Q ss_pred             hhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          320 CFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       320 ~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ..||+.||++|||+.++++.|+++.
T Consensus       286 ~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          286 LQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999873


No 37 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=4.1e-43  Score=322.99  Aligned_cols=252  Identities=23%  Similarity=0.347  Sum_probs=196.2

Q ss_pred             hhcCCcccccccccCcceeeEEEEecC----CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPG----QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQI  120 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (345)
                      ...++|++++.||+|+||.||+|++.+    .++..||||.+.....                          ......+
T Consensus        68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~  121 (367)
T 3l9p_A           68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS--------------------------EQDELDF  121 (367)
T ss_dssp             CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC--------------------------HHHHHHH
T ss_pred             cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC--------------------------hhhHHHH
Confidence            345789999999999999999999642    3577899999864321                          1224567


Q ss_pred             HHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------------CCHHHHHHHHHHHHHHHHHHhh
Q 046907          121 QSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------------LDWLARHRIALGLACGLEYLHM  184 (345)
Q Consensus       121 ~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------------l~~~~~~~i~~~i~~~l~~lh~  184 (345)
                      .+|+.+++.++||||+++++++...+  ..+++++++.++++                +++..+..++.|++.||.|||+
T Consensus       122 ~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~  199 (367)
T 3l9p_A          122 LMEALIISKFNHQNIVRCIGVSLQSL--PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE  199 (367)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCeEEEEEecCC--CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh
Confidence            88999999999999999999988766  56889999987543                5666677899999999999999


Q ss_pred             cCCCCeEecCCCCCCeeecCCC---CeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHH
Q 046907          185 HHCPRIIHRDLNPVNVLLDDDI---EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL  260 (345)
Q Consensus       185 ~~~~~iiH~dlk~~nil~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl  260 (345)
                      .+   ++||||||+|||++.++   .+||+|||+++...............||+.|+|||.+.+..++.++||| +|+++
T Consensus       200 ~~---ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il  276 (367)
T 3l9p_A          200 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL  276 (367)
T ss_dssp             TT---CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             CC---eeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHH
Confidence            99   99999999999999554   5999999999755332222223346779999999999998999999999 99999


Q ss_pred             HHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 046907          261 AGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRM  339 (345)
Q Consensus       261 ~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~  339 (345)
                      |||++ |..||..    .........+........+             ......+.+++..||+.||++|||+.+|++.
T Consensus       277 ~ellt~g~~pf~~----~~~~~~~~~i~~~~~~~~~-------------~~~~~~l~~li~~~l~~dP~~Rps~~eil~~  339 (367)
T 3l9p_A          277 WEIFSLGYMPYPS----KSNQEVLEFVTSGGRMDPP-------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILER  339 (367)
T ss_dssp             HHHHTTSCCSSTT----CCHHHHHHHHHTTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhCCCCCCCC----CCHHHHHHHHHcCCCCCCC-------------ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99998 9999643    3334444444332211111             1112347789999999999999999999999


Q ss_pred             Hhhhh
Q 046907          340 LSQIQ  344 (345)
Q Consensus       340 L~~l~  344 (345)
                      |+.+.
T Consensus       340 l~~~~  344 (367)
T 3l9p_A          340 IEYCT  344 (367)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98763


No 38 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=2.7e-42  Score=307.66  Aligned_cols=255  Identities=21%  Similarity=0.274  Sum_probs=198.2

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++++.||+|+||.||+|+.+ .+++.||+|.+.......                         .....+.+|+.++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~-------------------------~~~~~~~~E~~~l   55 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNR-ETHEIVALKRVRLDDDDE-------------------------GVPSSALREICLL   55 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEESSCSST-------------------------THHHHHHHHHHHH
T ss_pred             CCceeeeEecCCCCeEEEEEEEC-CCCceEEEEeeeccCCcC-------------------------CcchHHHHHHHHH
Confidence            58999999999999999999864 579999999997543321                         2245677899999


Q ss_pred             hhccCCCccceeEEEecCCcceeeeeccccCCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 046907          128 GQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR---------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPV  198 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~  198 (345)
                      +.++||||+++++++..++  .+++++++++++         ..++...+..++.|++.||.|||+.+   ++||||||+
T Consensus        56 ~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~  130 (292)
T 3o0g_A           56 KELKHKNIVRLHDVLHSDK--KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQ  130 (292)
T ss_dssp             TTCCCTTBCCEEEEEEETT--EEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGG
T ss_pred             hcCCCCCEeeEEeEEEeCC--EEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHH
Confidence            9999999999999998776  788999998752         45778888999999999999999999   999999999


Q ss_pred             CeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccc-cCccchhh-HHHHHHHHHhCCCCCcccccc
Q 046907          199 NVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT-LTEKCDIY-FGALLAGLVMGKLPSDKFFQH  276 (345)
Q Consensus       199 nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~-~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~  276 (345)
                      ||+++.++.+||+|||++........  ......||+.|+|||.+.+.. ++.++||| +|+++|+|++|..||   +..
T Consensus       131 Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~---~~~  205 (292)
T 3o0g_A          131 NLLINRNGELKLANFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL---FPG  205 (292)
T ss_dssp             GEEECTTSCEEECCCTTCEECCSCCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCS---CCC
T ss_pred             HEEEcCCCCEEEeecccceecCCccc--cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCC---cCC
Confidence            99999999999999999987643322  224467899999999998766 79999999 999999999988884   344


Q ss_pred             cchhhHHHHHHHHhhhcCCCcccc---------------ccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          277 TNEMSFVKWMRNVMASENPKRAID---------------SKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .........+......+.......               ........+.....+.+++..||+.||++|||++++++
T Consensus       206 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          206 NDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             SSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            444445454444433222211000               00011112233455778999999999999999999986


No 39 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=1.9e-42  Score=313.46  Aligned_cols=253  Identities=23%  Similarity=0.343  Sum_probs=196.8

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecC--CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPG--QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      ....++|++.+.||+|+||.||+|++..  ..+..||||.+.....                          ......+.
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~   98 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT--------------------------ERQRRDFL   98 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC--------------------------HHHHHHHH
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC--------------------------HHHHHHHH
Confidence            3456789999999999999999999742  2345699999964321                          22356788


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +|+.+++.++||||+++++++..++  .++++++++.+++          .+++..+..++.|++.||.|||+.+   ++
T Consensus        99 ~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---iv  173 (325)
T 3kul_A           99 SEASIMGQFDHPNIIRLEGVVTRGR--LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YV  173 (325)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEECGGG--CCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             HHHHHHHhCCCCCCCcEEEEEEeCC--ccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            9999999999999999999987665  6889999998754          3667778899999999999999999   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCc-ceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHT-HITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKL  268 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~  268 (345)
                      ||||||+||+++.++.+||+|||++........ ........+|+.|+|||.+.+..++.++||| +|+++|||++ |..
T Consensus       174 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~  253 (325)
T 3kul_A          174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER  253 (325)
T ss_dssp             CSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999987654322 1222334567889999999988999999999 9999999999 999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ||..    .........+......+.+             ......+.+++..||+.||++|||+.+|++.|+.+.
T Consensus       254 p~~~----~~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~  312 (325)
T 3kul_A          254 PYWN----MTNRDVISSVEEGYRLPAP-------------MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI  312 (325)
T ss_dssp             TTTT----SCHHHHHHHHHTTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             Cccc----CCHHHHHHHHHcCCCCCCC-------------CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9643    2333333333322211111             122235778999999999999999999999999874


No 40 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=9.2e-43  Score=329.46  Aligned_cols=251  Identities=24%  Similarity=0.388  Sum_probs=200.7

Q ss_pred             hhhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           40 DLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQ  119 (345)
Q Consensus        40 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (345)
                      ...|....++|++.+.||+|+||.||+|+++  ++..||||.+......                            .+.
T Consensus       180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~~vavK~~~~~~~~----------------------------~~~  229 (454)
T 1qcf_A          180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYN--KHTKVAVKTMKPGSMS----------------------------VEA  229 (454)
T ss_dssp             TTCSBCCGGGEEEEEEEECCSSEEEEEEEET--TTEEEEEEEECTTSBC----------------------------HHH
T ss_pred             ccceeechHHeEEEEEcccCCceEEEEEEEC--CccEEEEEEecCCCcc----------------------------HHH
Confidence            3457888899999999999999999999975  5788999999753221                            456


Q ss_pred             HHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCC
Q 046907          120 IQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCP  188 (345)
Q Consensus       120 ~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~  188 (345)
                      +.+|+.+++.++||||+++++++..+   .++++++++.++++           +++.....++.|++.||.|||+.+  
T Consensus       230 ~~~E~~~l~~l~h~~iv~l~~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--  304 (454)
T 1qcf_A          230 FLAEANVMKTLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--  304 (454)
T ss_dssp             HHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHHHHHHHhhCCCCCEeeEEEEEeCC---ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            88999999999999999999988633   47899999988765           344456679999999999999998  


Q ss_pred             CeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-C
Q 046907          189 RIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-G  266 (345)
Q Consensus       189 ~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g  266 (345)
                       ++||||||+|||++.++.+||+|||+++....... .......+|..|+|||.+.+..++.++||| ||+++|||++ |
T Consensus       305 -ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g  382 (454)
T 1qcf_A          305 -YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG  382 (454)
T ss_dssp             -CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             -ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCC
Confidence             99999999999999999999999999986643211 112334567889999999988999999999 9999999999 9


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ..||...    ...+....+......+.+             ..+...+.++|..||+.||++|||+.+|++.|+++.
T Consensus       383 ~~P~~~~----~~~~~~~~i~~~~~~~~~-------------~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~  443 (454)
T 1qcf_A          383 RIPYPGM----SNPEVIRALERGYRMPRP-------------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY  443 (454)
T ss_dssp             CCSSTTC----CHHHHHHHHHHTCCCCCC-------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             CCCCCCC----CHHHHHHHHHcCCCCCCC-------------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence            9997542    333444434332221111             122345788999999999999999999999999873


No 41 
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=1.9e-42  Score=314.63  Aligned_cols=258  Identities=25%  Similarity=0.366  Sum_probs=203.9

Q ss_pred             hhhhHHhhcCCcccccccccCcceeeEEEEecC------CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHH
Q 046907           39 KDLAFLEKKGGLASLEKIGSGGCGEVYKAELPG------QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEML  112 (345)
Q Consensus        39 ~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (345)
                      ....|....++|++.+.||+|+||.||+|++.+      .++..||+|.+.....                         
T Consensus        26 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~-------------------------   80 (334)
T 2pvf_A           26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-------------------------   80 (334)
T ss_dssp             CCTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC-------------------------
T ss_pred             CCccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc-------------------------
Confidence            445567788999999999999999999998642      3577899999964321                         


Q ss_pred             HHHHHHHHHHHHHHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC-------------------------CCHH
Q 046907          113 LNKKMRQIQSEINTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------------------LDWL  166 (345)
Q Consensus       113 ~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------------------l~~~  166 (345)
                       ......+.+|+.+++.+ +||||+++++++..++  .++++++++.++++                         +++.
T Consensus        81 -~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  157 (334)
T 2pvf_A           81 -EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK  157 (334)
T ss_dssp             -HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHH
T ss_pred             -HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC--ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHH
Confidence             22356788999999999 9999999999988766  67889999987543                         5667


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccc
Q 046907          167 ARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQML  246 (345)
Q Consensus       167 ~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~  246 (345)
                      .+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++................+|+.|+|||.+.+.
T Consensus       158 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  234 (334)
T 2pvf_A          158 DLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR  234 (334)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCC
Confidence            77889999999999999998   999999999999999999999999999877654433333445678899999999988


Q ss_pred             ccCccchhh-HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccC
Q 046907          247 TLTEKCDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTL  324 (345)
Q Consensus       247 ~~~~~~Dvw-lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~  324 (345)
                      .++.++||| +|+++|+|++ |..||..    ....+....+........+             ......+.+++..||+
T Consensus       235 ~~~~~~Di~slG~il~ellt~g~~p~~~----~~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~  297 (334)
T 2pvf_A          235 VYTHQSDVWSFGVLMWEIFTLGGSPYPG----IPVEELFKLLKEGHRMDKP-------------ANCTNELYMMMRDCWH  297 (334)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTSCCSSTT----CCHHHHHHHHHHTCCCCCC-------------TTCCHHHHHHHHHHTC
T ss_pred             CcChHHHHHHHHHHHHHHHhCCCCCcCc----CCHHHHHHHHhcCCCCCCC-------------ccCCHHHHHHHHHHcc
Confidence            899999999 9999999999 9999643    2333333333332211111             1122347788999999


Q ss_pred             CCCCCCCCHHHHHHHHhhhh
Q 046907          325 EDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       325 ~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      .||.+|||+.++++.|+++.
T Consensus       298 ~dp~~Rps~~ell~~L~~l~  317 (334)
T 2pvf_A          298 AVPSQRPTFKQLVEDLDRIL  317 (334)
T ss_dssp             SSGGGSCCHHHHHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHHHHHH
Confidence            99999999999999999873


No 42 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=3e-42  Score=308.29  Aligned_cols=256  Identities=23%  Similarity=0.372  Sum_probs=192.9

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|++   +++.||||.+...                              ....+..|.+
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~------------------------------~~~~~~~e~~   52 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW---QGENVAVKIFSSR------------------------------DEKSWFRETE   52 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE---TTEEEEEEEECGG------------------------------GHHHHHHHHH
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE---CCEEEEEEEeccc------------------------------cchhhHHHHH
Confidence            356899999999999999999986   6889999998531                              1223344555


Q ss_pred             HHhh--ccCCCccceeEEEecC--CcceeeeeccccCCCCC--------CCHHHHHHHHHHHHHHHHHHh--------hc
Q 046907          126 TVGQ--IRHRNLHPLLAHVTRP--DCHLLYILNDVSQGRRE--------LDWLARHRIALGLACGLEYLH--------MH  185 (345)
Q Consensus       126 ~l~~--l~hpniv~l~~~~~~~--~~~~l~~~~~~~~~~~~--------l~~~~~~~i~~~i~~~l~~lh--------~~  185 (345)
                      ++..  ++||||+++++++...  ....++++++++.++++        +++.....++.|++.||.|||        +.
T Consensus        53 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~  132 (301)
T 3q4u_A           53 LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP  132 (301)
T ss_dssp             HHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC
T ss_pred             HHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC
Confidence            5555  7999999999986543  33468899999988654        677788899999999999999        77


Q ss_pred             CCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcce--eccCcccCcccccccccccc------ccCccchhh-H
Q 046907          186 HCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHI--TTSNVVGTVEYIAPEYLQML------TLTEKCDIY-F  256 (345)
Q Consensus       186 ~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~gt~~~~aPE~~~~~------~~~~~~Dvw-l  256 (345)
                      +   ++||||||+|||++.++.+||+|||++..........  ......||+.|+|||.+.+.      .++.++||| +
T Consensus       133 ~---ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvwsl  209 (301)
T 3q4u_A          133 A---IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAF  209 (301)
T ss_dssp             E---EECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHH
T ss_pred             C---eecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHH
Confidence            7   9999999999999999999999999998765433221  12345899999999999876      556799999 9


Q ss_pred             HHHHHHHHhC----------CCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCC
Q 046907          257 GALLAGLVMG----------KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLED  326 (345)
Q Consensus       257 G~vl~el~tg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~d  326 (345)
                      |+++|||++|          ..||.............   .............+..   .........+.+++..||+.|
T Consensus       210 G~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~d  283 (301)
T 3q4u_A          210 GLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDM---RKVVCVDQQRPNIPNR---WFSDPTLTSLAKLMKECWYQN  283 (301)
T ss_dssp             HHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHH---HHHHTTSCCCCCCCGG---GGGSHHHHHHHHHHHHHCCSS
T ss_pred             HHHHHHHHhhhcCccccccccccccccCCCCcchhhh---hHHHhccCCCCCCChh---hccCccHHHHHHHHHHHhhcC
Confidence            9999999999          78875543332222221   1111111111111111   112345667889999999999


Q ss_pred             CCCCCCHHHHHHHHhhh
Q 046907          327 PNERPNSKDVRRMLSQI  343 (345)
Q Consensus       327 p~~Rpt~~~ll~~L~~l  343 (345)
                      |++|||+.+|++.|+++
T Consensus       284 P~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          284 PSARLTALRIKKTLTKI  300 (301)
T ss_dssp             GGGSCCHHHHHHHHHHH
T ss_pred             hhhCCCHHHHHHHHhcc
Confidence            99999999999999987


No 43 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=5.5e-42  Score=306.52  Aligned_cols=270  Identities=20%  Similarity=0.254  Sum_probs=191.0

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .+++.||||.+...................... ............+.+.+|+.
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~E~~   88 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNE-NDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRP-APGGCIQPRGPIEQVYQEIA   88 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEET-TTTEEEEEEEEECC--------------------------------CHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEEC-CCCcEEEEEEeehhhhhhhcccccccccccccc-cccccccccchHHHHHHHHH
Confidence            5679999999999999999999854 579999999997654322110000000000000 00000011223567889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC--------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE--------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~--------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +++.++||||+++++++..++...+++++|+++++.+        +++.....++.|++.||.|||+.+   ++||||||
T Consensus        89 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp  165 (298)
T 2zv2_A           89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKP  165 (298)
T ss_dssp             HHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCG
T ss_pred             HHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCH
Confidence            9999999999999999988666689999999987543        677788999999999999999998   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccc---cCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~---~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      +||+++.++.+||+|||++........  ......||+.|+|||.+.+..   ++.++||| +|+++|+|++|..||...
T Consensus       166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  243 (298)
T 2zv2_A          166 SNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE  243 (298)
T ss_dssp             GGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             HHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence            999999999999999999987654322  234468999999999998765   37789999 999999999999997432


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                          ........+...    ......        .+.....+.+++.+||+.||++|||+.++++
T Consensus       244 ----~~~~~~~~~~~~----~~~~~~--------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          244 ----RIMCLHSKIKSQ----ALEFPD--------QPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             ----SHHHHHHHHHHC----CCCCCS--------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ----cHHHHHHHHhcc----cCCCCC--------ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence                222222222211    110000        0111234778899999999999999999874


No 44 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.7e-42  Score=311.93  Aligned_cols=255  Identities=23%  Similarity=0.311  Sum_probs=192.9

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++++.||+|+||.||+|+..  +|+.||+|.+.....+                         ......+.+|+.
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~~~-------------------------~~~~~~~~~E~~   71 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDS--QGRIVALKRIRLDAED-------------------------EGIPSTAIREIS   71 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEET--TSCEEEEEEEC-------------------------------CHHHHHHHHHH
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEEC--CCCEEEEEEEeccccc-------------------------chhhHHHHHHHH
Confidence            3468999999999999999999864  6899999999643211                         123566788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR---------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++..++  .+++++++++++         ..++...+..++.|++.||.|||+.+   ++|||||
T Consensus        72 ~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dik  146 (311)
T 3niz_A           72 LLKELHHPNIVSLIDVIHSER--CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLK  146 (311)
T ss_dssp             HHHHCCCTTBCCEEEEECCSS--CEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCC
T ss_pred             HHHHcCCCCEeeeeeEEccCC--EEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCc
Confidence            999999999999999988765  688999998752         33778888899999999999999998   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-cccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      |+||+++.++.+||+|||++........  ......||+.|+|||.+.+ ..++.++||| +|+++|+|++|..||....
T Consensus       147 p~NIl~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  224 (311)
T 3niz_A          147 PQNLLINSDGALKLADFGLARAFGIPVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT  224 (311)
T ss_dssp             GGGEEECTTCCEEECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             hHhEEECCCCCEEEccCcCceecCCCcc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999987653322  2234678999999999976 4589999999 9999999999999975432


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccc-----------cccCC-----CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDS-----------KLVGN-----GCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-----~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                          ..+....+......+.+......           .....     ..+.....+.+++..||+.||++|||+.++++
T Consensus       225 ----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          225 ----DDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             ----TTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             ----hHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                33333444443333322111000           00000     01112245778999999999999999999986


No 45 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=1e-42  Score=317.21  Aligned_cols=254  Identities=21%  Similarity=0.334  Sum_probs=199.8

Q ss_pred             HHhhcCCcccccccccCcceeeEEEEecC----CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 046907           43 FLEKKGGLASLEKIGSGGCGEVYKAELPG----QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMR  118 (345)
Q Consensus        43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (345)
                      +....++|++.+.||+|+||.||+|++.+    .++..||||.+.....                          .....
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~   95 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--------------------------ADMQA   95 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC--------------------------HHHHH
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC--------------------------HHHHH
Confidence            45577899999999999999999999753    3568999999964321                          12356


Q ss_pred             HHHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------------------------------CCH
Q 046907          119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------------------------------LDW  165 (345)
Q Consensus       119 ~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------------------------------l~~  165 (345)
                      .+.+|+.+++.++||||+++++++..++  .++++++++.++++                                 +++
T Consensus        96 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  173 (343)
T 1luf_A           96 DFQREAALMAEFDNPNIVKLLGVCAVGK--PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC  173 (343)
T ss_dssp             HHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCH
T ss_pred             HHHHHHHHHHhCCCCCEEEEEEEEccCC--ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCH
Confidence            7889999999999999999999988765  68889999987543                                 556


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc
Q 046907          166 LARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM  245 (345)
Q Consensus       166 ~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~  245 (345)
                      ..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++................||+.|+|||.+.+
T Consensus       174 ~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  250 (343)
T 1luf_A          174 AEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY  250 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhcc
Confidence            667789999999999999998   99999999999999999999999999976643322223344678899999999998


Q ss_pred             cccCccchhh-HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhcc
Q 046907          246 LTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCT  323 (345)
Q Consensus       246 ~~~~~~~Dvw-lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl  323 (345)
                      ..++.++||| +|+++|+|++ |..||..    ....+....+........             +......+.+++..||
T Consensus       251 ~~~~~~~Di~slG~il~el~t~g~~p~~~----~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~li~~~l  313 (343)
T 1luf_A          251 NRYTTESDVWAYGVVLWEIFSYGLQPYYG----MAHEEVIYYVRDGNILAC-------------PENCPLELYNLMRLCW  313 (343)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTT----SCHHHHHHHHHTTCCCCC-------------CTTCCHHHHHHHHHHT
T ss_pred             CCcCcccccHHHHHHHHHHHhcCCCcCCC----CChHHHHHHHhCCCcCCC-------------CCCCCHHHHHHHHHHc
Confidence            8999999999 9999999999 9999643    233333333322211110             1112234778899999


Q ss_pred             CCCCCCCCCHHHHHHHHhhhh
Q 046907          324 LEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       324 ~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      +.||.+|||+.++++.|+++.
T Consensus       314 ~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          314 SKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             CSSGGGSCCHHHHHHHHHHTT
T ss_pred             ccCcccCCCHHHHHHHHHHHH
Confidence            999999999999999999885


No 46 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=1e-41  Score=305.90  Aligned_cols=258  Identities=31%  Similarity=0.495  Sum_probs=199.9

Q ss_pred             ccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 046907           51 ASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQI  130 (345)
Q Consensus        51 ~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  130 (345)
                      ...+.||+|+||.||+|++   ++..||+|.+........                       ....+.+.+|+.+++.+
T Consensus        34 ~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~-----------------------~~~~~~~~~E~~~l~~l   87 (307)
T 2nru_A           34 VGGNKMGEGGFGVVYKGYV---NNTTVAVKKLAAMVDITT-----------------------EELKQQFDQEIKVMAKC   87 (307)
T ss_dssp             TTCCEEEECSSEEEEEEES---SSCEEEEEEECCCTTSCT-----------------------TTHHHHHHHHHHHHHHC
T ss_pred             ccCCccccCCCeEEEEEEE---CCceEEEEEEecccCcch-----------------------HHHHHHHHHHHHHHHhc
Confidence            3348999999999999985   578999999865322110                       12256788999999999


Q ss_pred             cCCCccceeEEEecCCcceeeeeccccCCCCC------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 046907          131 RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE------------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPV  198 (345)
Q Consensus       131 ~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~------------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~  198 (345)
                      +||||+++++++..++  ..++++++++++++            +++..+..++.|++.||.|||+.+   ++|+||||+
T Consensus        88 ~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~  162 (307)
T 2nru_A           88 QHENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSA  162 (307)
T ss_dssp             CCTTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGG
T ss_pred             CCCCeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHH
Confidence            9999999999988766  57888899877543            667778899999999999999998   999999999


Q ss_pred             CeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccccccc
Q 046907          199 NVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHT  277 (345)
Q Consensus       199 nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~  277 (345)
                      ||+++.++.+||+|||++................||+.|+|||.+.+ .++.++||| +|+++|+|++|..||.......
T Consensus       163 Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~  241 (307)
T 2nru_A          163 NILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ  241 (307)
T ss_dssp             GEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS
T ss_pred             HEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH
Confidence            99999999999999999987654433333445689999999999876 578899999 9999999999999976543332


Q ss_pred             chhhHHHHHHHHhhhcCC-CccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          278 NEMSFVKWMRNVMASENP-KRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ........+   ...... ....+. ............+.+++..||+.||.+|||+.++++.|+++.
T Consensus       242 ~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          242 LLLDIKEEI---EDEEKTIEDYIDK-KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             BTTHHHHHH---HTTSCCHHHHSCS-SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHh---hhhhhhhhhhccc-cccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            222222221   111111 111111 223456677788999999999999999999999999999885


No 47 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.6e-42  Score=321.41  Aligned_cols=261  Identities=20%  Similarity=0.307  Sum_probs=187.9

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++++.||+|+||.||+|+.. .+|+.||||.+......                         .....++.+|+.
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~i~~~~~~-------------------------~~~~~~~~~E~~   60 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDR-RTGEVVAVKKIFDAFQN-------------------------STDAQRTFREIM   60 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEET-TTCCEEEEEEECC--CC-------------------------HHHHHHHHHHHH
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEEC-CCCCEEEEEEecccccC-------------------------hHHHHHHHHHHH
Confidence            3568999999999999999999854 57999999998643222                         233566788999


Q ss_pred             HHhhcc-CCCccceeEEEecCCcceeeeeccccCCC-------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          126 TVGQIR-HRNLHPLLAHVTRPDCHLLYILNDVSQGR-------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       126 ~l~~l~-hpniv~l~~~~~~~~~~~l~~~~~~~~~~-------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +++.+. ||||+++++++..++...++++++++.+.       ..++......++.|++.||.|||+.+   ++||||||
T Consensus        61 ~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp  137 (388)
T 3oz6_A           61 ILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKP  137 (388)
T ss_dssp             HHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCG
T ss_pred             HHHhccCCCCCCeeeeEEecCCCCEEEEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCH
Confidence            999997 99999999999887767899999999752       34667777889999999999999999   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCC-------------------cceeccCcccCccccccccccc-cccCccchhh-H
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAH-------------------THITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-F  256 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~-------------------~~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-l  256 (345)
                      +|||++.++.+||+|||+++......                   ........+||+.|+|||++.+ ..++.++||| +
T Consensus       138 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSl  217 (388)
T 3oz6_A          138 SNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSL  217 (388)
T ss_dssp             GGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHH
T ss_pred             HHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHH
Confidence            99999999999999999998653311                   0112244689999999999987 5689999999 9


Q ss_pred             HHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCcccc--------------------ccccCCCcH-------
Q 046907          257 GALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAID--------------------SKLVGNGCE-------  309 (345)
Q Consensus       257 G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~-------  309 (345)
                      |+++|||++|..||.+    .+.......+......+.......                    ........+       
T Consensus       218 G~il~ell~g~~pf~~----~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (388)
T 3oz6_A          218 GCILGEILCGKPIFPG----SSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLL  293 (388)
T ss_dssp             HHHHHHHHHSSCSCCC----SSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCC----CCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcc
Confidence            9999999999999653    333444444433332221100000                    000000000       


Q ss_pred             ------HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 046907          310 ------EQMLLVLKIACFCTLEDPNERPNSKDVRRM  339 (345)
Q Consensus       310 ------~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~  339 (345)
                            .....+.+|+.+||+.||++|||++++++.
T Consensus       294 ~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          294 KINPKADCNEEALDLLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             HHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             cccccccCCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence                  123457889999999999999999999763


No 48 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=2e-42  Score=306.95  Aligned_cols=253  Identities=21%  Similarity=0.313  Sum_probs=198.7

Q ss_pred             hhhhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 046907           39 KDLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMR  118 (345)
Q Consensus        39 ~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (345)
                      ....|..+.++|++++.||+|+||.||+|+++  ++..||+|.+......                            .+
T Consensus        15 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~----------------------------~~   64 (283)
T 3gen_A           15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMS----------------------------ED   64 (283)
T ss_dssp             -CCTTBCCGGGEEEEEECC---CEEEEEEEET--TTEEEEEEEECTTSBC----------------------------HH
T ss_pred             CCCCccCCHHHHHhHhhcCCCCCceEEEEEEc--CCCeEEEEEecCCCCC----------------------------HH
Confidence            34567778899999999999999999999875  6788999999754322                            34


Q ss_pred             HHHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 046907          119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCP  188 (345)
Q Consensus       119 ~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~  188 (345)
                      .+.+|+.+++.++||||+++++++..++  .++++++++.+++          .+++.....++.|++.||.|||+.+  
T Consensus        65 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--  140 (283)
T 3gen_A           65 EFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ--  140 (283)
T ss_dssp             HHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC--
Confidence            5778999999999999999999987765  6889999998753          3677788899999999999999998  


Q ss_pred             CeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-C
Q 046907          189 RIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-G  266 (345)
Q Consensus       189 ~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g  266 (345)
                       ++|+||||+||+++.++.++|+|||++........ .......+|+.|+|||.+.+..++.++||| +|+++|+|++ |
T Consensus       141 -i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g  218 (283)
T 3gen_A          141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG  218 (283)
T ss_dssp             -CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTT
T ss_pred             -ccCCCCccceEEEcCCCCEEEcccccccccccccc-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence             99999999999999999999999999976543221 122335567889999999988999999999 9999999998 9


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ..||...    ........+........+          ..   ....+.+++..||+.||++|||+.++++.|+++.
T Consensus       219 ~~p~~~~----~~~~~~~~~~~~~~~~~~----------~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          219 KMPYERF----TNSETAEHIAQGLRLYRP----------HL---ASEKVYTIMYSCWHEKADERPTFKILLSNILDVM  279 (283)
T ss_dssp             CCTTTTS----CHHHHHHHHHTTCCCCCC----------TT---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCcccc----ChhHHHHHHhcccCCCCC----------Cc---CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence            9997542    333333333322211111          01   1234778999999999999999999999999874


No 49 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=4.6e-42  Score=322.92  Aligned_cols=246  Identities=15%  Similarity=0.224  Sum_probs=194.1

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++.+.||+|+||.||+|... .+|..+|+|.+.....+                         ....+.+.+|+.
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~-~~~~~~a~K~i~~~~~~-------------------------~~~~~~~~~E~~   62 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKV-LAGQEYAAMIINTKKLS-------------------------ARDHQKLEREAR   62 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEET-TTTEEEEEEEEESCSCH-------------------------HHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEEC-CCCcEEEEEEEEcccCC-------------------------HHHHHHHHHHHH
Confidence            3468999999999999999999854 68999999999765433                         223567889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++..++  .++++++++.++++         ++......++.|++.||.|||+.+   ++|||||
T Consensus        63 il~~l~hpnIv~l~~~~~~~~--~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlK  137 (444)
T 3soa_A           63 ICRLLKHPNIVRLHDSISEEG--HHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG---VVHRNLK  137 (444)
T ss_dssp             HHHHCCBTTBCCEEEEEECSS--EEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCS
T ss_pred             HHHhCCCcCCCeEEEEEEECC--EEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCC
Confidence            999999999999999998776  78999999988754         566777899999999999999999   9999999


Q ss_pred             CCCeeec---CCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcc
Q 046907          197 PVNVLLD---DDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDK  272 (345)
Q Consensus       197 ~~nil~~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~  272 (345)
                      |+|||++   .++.+||+|||++........  ......||+.|+|||++.+..++.++||| +|+++|+|++|..||..
T Consensus       138 p~NIll~~~~~~~~vkL~DFG~a~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~  215 (444)
T 3soa_A          138 PENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD  215 (444)
T ss_dssp             STTEEESBSSTTCCEEECCCSSCBCCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             HHHEEEeccCCCCcEEEccCceeEEecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence            9999998   467899999999976654322  22346899999999999998999999999 99999999999999643


Q ss_pred             cccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          273 FFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                          .+.......+.........          ...+.....+.+++..||+.||++|||+.++++
T Consensus       216 ----~~~~~~~~~i~~~~~~~~~----------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          216 ----EDQHRLYQQIKAGAYDFPS----------PEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             ----SSHHHHHHHHHHTCCCCCT----------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ----ccHHHHHHHHHhCCCCCCc----------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                2333444433332211110          011112234778889999999999999999986


No 50 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.5e-42  Score=316.27  Aligned_cols=242  Identities=22%  Similarity=0.319  Sum_probs=185.0

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++.+.||+|+||.||+|+.. .+|+.||||.+......                          .....+.+|+.
T Consensus         8 l~~~y~i~~~lG~G~~g~V~~a~~~-~~~~~vAiK~~~~~~~~--------------------------~~~~~~~~Ei~   60 (347)
T 3zgw_A            8 LLKYYELHETIGTGGFAKVKLACHI-LTGEMVAIKIMDKNTLG--------------------------SDLPRIKTEIE   60 (347)
T ss_dssp             TTTTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEESSCC-----------------------------CCHHHHHHH
T ss_pred             HhcCeEEEEEEEcCCCeEEEEEEEC-CCCCEEEEEEEEccccc--------------------------hHHHHHHHHHH
Confidence            4679999999999999999999854 57999999998654322                          12345778999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++...+  .+++++|+++++++         +++..+..++.|++.||.|||+.+   ++|||||
T Consensus        61 ~l~~l~hpnIv~l~~~~~~~~--~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlk  135 (347)
T 3zgw_A           61 ALKNLRHQHICQLYHVLETAN--KIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLK  135 (347)
T ss_dssp             HHHTCCCTTBCCEEEEEECSS--EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCC
T ss_pred             HHHhCCCCCEeeEEEEEEeCC--EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCcc
Confidence            999999999999999998776  78999999988754         566677889999999999999999   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc-Cccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL-TEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~-~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      |+||+++.++.+||+|||++........ .......||+.|+|||.+.+..+ +.++||| +|+++|+|++|..||..  
T Consensus       136 p~NIll~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~--  212 (347)
T 3zgw_A          136 PENLLFDEYHKLKLIDFGLCAKPKGNKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD--  212 (347)
T ss_dssp             GGGEEECTTSCEEECCCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC--
T ss_pred             HHHEEEcCCCCEEEEeccCcccccCCCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC--
Confidence            9999999999999999999876543221 12345689999999999998875 8899999 99999999999999743  


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                        .+.......+....   ..       ....    ....+.+++.+||+.||++|||+.++++
T Consensus       213 --~~~~~~~~~i~~~~---~~-------~p~~----~s~~~~~li~~~L~~dP~~Rps~~eil~  260 (347)
T 3zgw_A          213 --DNVMALYKKIMRGK---YD-------VPKW----LSPSSILLLQQMLQVDPKKRISMKNLLN  260 (347)
T ss_dssp             --SSHHHHHHHHHHTC---CC-------CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --CCHHHHHHHHHcCC---CC-------CCCC----CCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence              23333333332221   11       0001    1123677889999999999999999985


No 51 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=3.1e-42  Score=311.83  Aligned_cols=246  Identities=24%  Similarity=0.359  Sum_probs=190.5

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++.+.||+|+||.||+|+.. .+++.||+|.+......                          ...+.+.+|+.
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~E~~   57 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRAV--------------------------DCPENIKKEIC   57 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECC---------------------------------CHHHHHH
T ss_pred             HhhhceeeeEEecCCCEEEEEEEEC-CCCcEEEEEEEEccccc--------------------------chHHHHHHHHH
Confidence            3478999999999999999999864 57999999998643211                          12355778999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++..++  ..++++|++.++++         +++.....++.|++.||.|||+.+   ++|||||
T Consensus        58 ~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlk  132 (323)
T 3tki_A           58 INKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIK  132 (323)
T ss_dssp             HHHHCCCTTBCCEEEEEECSS--EEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCS
T ss_pred             HHHhCCCCCCCeEEEEEecCC--eEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccc
Confidence            999999999999999998776  78899999987543         677788999999999999999998   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc-Cccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL-TEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~-~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      |+||+++.++.+||+|||++................||+.|+|||++.+..+ +.++||| +|+++|+|++|..||....
T Consensus       133 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  212 (323)
T 3tki_A          133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  212 (323)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC
T ss_pred             hHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence            9999999999999999999986643333333345789999999999988775 7789999 9999999999999986432


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ..  ......+..... ...+            .......+.+++..||+.||++|||+.++++
T Consensus       213 ~~--~~~~~~~~~~~~-~~~~------------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          213 DS--CQEYSDWKEKKT-YLNP------------WKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             TT--SHHHHHHHTTCT-TSTT------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hH--HHHHHHHhcccc-cCCc------------cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            21  111211111110 0000            1112234678999999999999999999875


No 52 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.7e-42  Score=315.93  Aligned_cols=258  Identities=24%  Similarity=0.310  Sum_probs=202.9

Q ss_pred             hhhHHhhcCCcccccccccCcceeeEEEEec----CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 046907           40 DLAFLEKKGGLASLEKIGSGGCGEVYKAELP----GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK  115 (345)
Q Consensus        40 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (345)
                      +..|....++|++.+.||+|+||.||+|++.    ..++..||+|.+.....                          ..
T Consensus        37 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~   90 (344)
T 1rjb_A           37 DLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--------------------------SS   90 (344)
T ss_dssp             CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------------------------
T ss_pred             CcCcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC--------------------------HH
Confidence            4456778899999999999999999999862    23577899999964211                          12


Q ss_pred             HHHHHHHHHHHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC--------------------------------
Q 046907          116 KMRQIQSEINTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE--------------------------------  162 (345)
Q Consensus       116 ~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~--------------------------------  162 (345)
                      ....+.+|+.+++++ +||||+++++++..++  .+++++++++++++                                
T Consensus        91 ~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (344)
T 1rjb_A           91 EREALMSELKMMTQLGSHENIVNLLGACTLSG--PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV  168 (344)
T ss_dssp             -CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTTTTCC---------------------
T ss_pred             HHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC--ccEEEEecCCCCcHHHHHhhccccccccccchhhhccccccccccc
Confidence            356788999999999 9999999999988766  58889999987543                                


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccc
Q 046907          163 LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEY  242 (345)
Q Consensus       163 l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~  242 (345)
                      +++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++................||+.|+|||.
T Consensus       169 l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~  245 (344)
T 1rjb_A          169 LTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPES  245 (344)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHH
Confidence            466677889999999999999998   99999999999999999999999999987654433333445677889999999


Q ss_pred             ccccccCccchhh-HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHh
Q 046907          243 LQMLTLTEKCDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIAC  320 (345)
Q Consensus       243 ~~~~~~~~~~Dvw-lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  320 (345)
                      +.+..++.++||| +|+++|+|++ |..||.....   .......+........+             ......+.+++.
T Consensus       246 ~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~  309 (344)
T 1rjb_A          246 LFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV---DANFYKLIQNGFKMDQP-------------FYATEEIYIIMQ  309 (344)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC---SHHHHHHHHTTCCCCCC-------------TTCCHHHHHHHH
T ss_pred             hccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc---HHHHHHHHhcCCCCCCC-------------CCCCHHHHHHHH
Confidence            9988999999999 9999999998 9999754322   22233333222111111             112234788999


Q ss_pred             hccCCCCCCCCCHHHHHHHHhhhh
Q 046907          321 FCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       321 ~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      .||+.||.+|||+.++++.|+.+.
T Consensus       310 ~~l~~dp~~Rps~~~l~~~l~~~~  333 (344)
T 1rjb_A          310 SCWAFDSRKRPSFPNLTSFLGCQL  333 (344)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHcCCCchhCcCHHHHHHHHHHHH
Confidence            999999999999999999998873


No 53 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=1.5e-42  Score=313.55  Aligned_cols=258  Identities=21%  Similarity=0.326  Sum_probs=185.6

Q ss_pred             hHHhhcCCcccccccccCcceeeEEEEecCCCC--ceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           42 AFLEKKGGLASLEKIGSGGCGEVYKAELPGQNG--RMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQ  119 (345)
Q Consensus        42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (345)
                      ++....++|++.+.||+|+||.||+|++....+  ..||||.+......                         ....+.
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~   71 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA-------------------------SSDIEE   71 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------------------------------CHHHHH
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC-------------------------HHHHHH
Confidence            345567899999999999999999998653222  37999998543211                         233677


Q ss_pred             HHHHHHHHhhccCCCccceeEEEecCCcc----eeeeeccccCCCCC---------------CCHHHHHHHHHHHHHHHH
Q 046907          120 IQSEINTVGQIRHRNLHPLLAHVTRPDCH----LLYILNDVSQGRRE---------------LDWLARHRIALGLACGLE  180 (345)
Q Consensus       120 ~~~E~~~l~~l~hpniv~l~~~~~~~~~~----~l~~~~~~~~~~~~---------------l~~~~~~~i~~~i~~~l~  180 (345)
                      +.+|+.+++.++||||+++++++...+..    ..+++++++.++++               +++..+..++.|++.||.
T Consensus        72 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~  151 (323)
T 3qup_A           72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGME  151 (323)
T ss_dssp             HHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHH
Confidence            88999999999999999999998776532    34889999988643               666778899999999999


Q ss_pred             HHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHH
Q 046907          181 YLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL  259 (345)
Q Consensus       181 ~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~v  259 (345)
                      |||+.+   ++||||||+||+++.++.+||+|||++................+++.|+|||.+.+..++.++||| +|++
T Consensus       152 ~LH~~~---ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  228 (323)
T 3qup_A          152 YLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVT  228 (323)
T ss_dssp             HHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHHcCC---cccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHH
Confidence            999999   999999999999999999999999999876544332233345678899999999998999999999 9999


Q ss_pred             HHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          260 LAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       260 l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      +|+|++ |..||...    ........+........             .+.....+.+++..||+.||++|||+.++++
T Consensus       229 l~ell~~g~~p~~~~----~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  291 (323)
T 3qup_A          229 MWEIMTRGQTPYAGI----ENAEIYNYLIGGNRLKQ-------------PPECMEEVYDLMYQCWSADPKQRPSFTCLRM  291 (323)
T ss_dssp             HHHHHTTSCCTTTTC----CGGGHHHHHHTTCCCCC-------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhCCCCCcccc----ChHHHHHHHhcCCCCCC-------------CCccCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            999999 89997542    23333333322211111             1122235788999999999999999999999


Q ss_pred             HHhhhh
Q 046907          339 MLSQIQ  344 (345)
Q Consensus       339 ~L~~l~  344 (345)
                      .|+++.
T Consensus       292 ~l~~~l  297 (323)
T 3qup_A          292 ELENIL  297 (323)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999873


No 54 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=3.1e-42  Score=309.90  Aligned_cols=257  Identities=22%  Similarity=0.310  Sum_probs=204.0

Q ss_pred             hhHHhhcCCcccccccccCcceeeEEEEe----cCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 046907           41 LAFLEKKGGLASLEKIGSGGCGEVYKAEL----PGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKK  116 (345)
Q Consensus        41 ~~~~~~~~~~~~~~~iG~G~~g~V~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (345)
                      ..|....++|++.+.||+|+||.||+|++    +..++..||+|.+......                          ..
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--------------------------~~   69 (313)
T 1t46_A           16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL--------------------------TE   69 (313)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH--------------------------HH
T ss_pred             cccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhH--------------------------HH
Confidence            34566778999999999999999999986    3356889999999643211                          22


Q ss_pred             HHHHHHHHHHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC---------------------------CCHHHH
Q 046907          117 MRQIQSEINTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------------------------LDWLAR  168 (345)
Q Consensus       117 ~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------------------------l~~~~~  168 (345)
                      .+.+.+|+.+++++ +||||+++++++..++  ..+++++++.++++                           +++...
T Consensus        70 ~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (313)
T 1t46_A           70 REALMSELKVLSYLGNHMNIVNLLGACTIGG--PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL  147 (313)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHH
T ss_pred             HHHHHHHHHHHhhcccCCCeeeEEEEEecCC--CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHH
Confidence            56788999999999 9999999999998766  57888999877433                           667778


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc
Q 046907          169 HRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL  248 (345)
Q Consensus       169 ~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~  248 (345)
                      ..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++................||+.|+|||.+.+..+
T Consensus       148 ~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  224 (313)
T 1t46_A          148 LSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY  224 (313)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHCC---eecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCC
Confidence            899999999999999998   99999999999999999999999999987755443333445677889999999998899


Q ss_pred             Cccchhh-HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCC
Q 046907          249 TEKCDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLED  326 (345)
Q Consensus       249 ~~~~Dvw-lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~d  326 (345)
                      +.++||| +|+++|+|++ |..||.....   .......+........+             ......+.+++..||+.|
T Consensus       225 ~~~~Di~slG~il~ellt~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~d  288 (313)
T 1t46_A          225 TFESDVWSYGIFLWELFSLGSSPYPGMPV---DSKFYKMIKEGFRMLSP-------------EHAPAEMYDIMKTCWDAD  288 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCS---SHHHHHHHHHTCCCCCC-------------TTSCHHHHHHHHHHTCSS
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCCCcccc---hhHHHHHhccCCCCCCc-------------ccCCHHHHHHHHHHcCCC
Confidence            9999999 9999999999 9999754322   22232333222111111             112234788899999999


Q ss_pred             CCCCCCHHHHHHHHhhhh
Q 046907          327 PNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       327 p~~Rpt~~~ll~~L~~l~  344 (345)
                      |.+|||+.++++.|+++.
T Consensus       289 p~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          289 PLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             GGGSCCHHHHHHHHHHHH
T ss_pred             chhCcCHHHHHHHHHHHH
Confidence            999999999999999863


No 55 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=1.8e-42  Score=313.81  Aligned_cols=249  Identities=19%  Similarity=0.305  Sum_probs=188.9

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCce----eEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRM----ISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      ..++|++.+.||+|+||.||+|++. .++..    ||+|.+....                          .......+.
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~~~~~vaiK~~~~~~--------------------------~~~~~~~~~   65 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREAT--------------------------SPKANKEIL   65 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEC-C----CCEEEEEEEC---------------------------------CHHHHH
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEc-CCCceEEEEEEEeeccccc--------------------------CHHHHHHHH
Confidence            4568999999999999999999864 34444    5888774321                          022356788


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +|+.+++.++||||+++++++..++   .+++++++.++++          +++..+..++.|++.||.|||+.+   ++
T Consensus        66 ~E~~~l~~l~h~~iv~~~~~~~~~~---~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---iv  139 (327)
T 3poz_A           66 DEAYVMASVDNPHVCRLLGICLTST---VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV  139 (327)
T ss_dssp             HHHHHHHHCCBTTBCCEEEEEESSS---EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             HHHHHHHhCCCCCEeEEEEEEecCC---eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---ee
Confidence            9999999999999999999998765   5667777776543          566677889999999999999998   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLP  269 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p  269 (345)
                      ||||||+|||++.++.+||+|||+++...............||..|+|||.+.+..++.++||| +|+++|||++ |..|
T Consensus       140 H~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  219 (327)
T 3poz_A          140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  219 (327)
T ss_dssp             CSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCC
Confidence            9999999999999999999999999877554433333445678899999999999999999999 9999999999 9999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      |...    ........+......+.+             +.....+.+++..||+.||++|||+.++++.|+++.
T Consensus       220 ~~~~----~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          220 YDGI----PASEISSILEKGERLPQP-------------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             TTTC----CGGGHHHHHHTTCCCCCC-------------TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             ccCC----CHHHHHHHHHcCCCCCCC-------------ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            7542    333343433332211111             112234778899999999999999999999998764


No 56 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=1.5e-42  Score=331.26  Aligned_cols=251  Identities=21%  Similarity=0.353  Sum_probs=201.8

Q ss_pred             hHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           42 AFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      .|....++|++.+.||+|+||.||+|+++ .++..||||.+......                            .+.+.
T Consensus       214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~~vavK~~~~~~~~----------------------------~~~~~  264 (495)
T 1opk_A          214 KWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTME----------------------------VEEFL  264 (495)
T ss_dssp             CCBCCGGGEEEEEESGGGTTSSEEEEEEG-GGTEEEEEEECCSSSSC----------------------------HHHHH
T ss_pred             ccccCHHHceeeeEecCCCCeEEEEEEEc-CCCeEEEEEEecCcccc----------------------------hHHHH
Confidence            46677889999999999999999999975 45889999999653221                            45678


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      +|+.++++++||||+++++++..++  .+++++|++.++++           +++.....++.|++.||.|||+.+   +
T Consensus       265 ~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---i  339 (495)
T 1opk_A          265 KEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F  339 (495)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             HHHHHHHhcCCCCEeeEEEEEecCC--cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            8999999999999999999998765  68899999987654           556667789999999999999998   9


Q ss_pred             EecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCC
Q 046907          191 IHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKL  268 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~  268 (345)
                      +||||||+|||++.++.+||+|||+++....... .......++..|+|||.+.+..++.++||| ||+++|||++ |..
T Consensus       340 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~  418 (495)
T 1opk_A          340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS  418 (495)
T ss_dssp             ECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCCCChhhEEECCCCcEEEeecccceeccCCce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCC
Confidence            9999999999999999999999999987644322 122345567899999999988999999999 9999999999 999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ||...    ...+....+........             +..+...+.++|.+||+.||++|||+.+|++.|+.+.
T Consensus       419 p~~~~----~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          419 PYPGI----DLSQVYELLEKDYRMER-------------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             SSTTC----CGGGHHHHHHTTCCCCC-------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             CCCCC----CHHHHHHHHHcCCCCCC-------------CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            97543    23334343332221111             1122345778899999999999999999999999873


No 57 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=2.3e-42  Score=318.57  Aligned_cols=252  Identities=21%  Similarity=0.354  Sum_probs=187.4

Q ss_pred             HhhcCCcccccccccCcceeeEEEEec--CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELP--GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      ..+.++|++.+.||+|+||.||+|++.  ..++..||||.+.....                          ....+.+.
T Consensus        41 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~--------------------------~~~~~~~~   94 (373)
T 2qol_A           41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--------------------------EKQRRDFL   94 (373)
T ss_dssp             BCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC--------------------------HHHHHHHH
T ss_pred             hcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC--------------------------HHHHHHHH
Confidence            446779999999999999999999864  23577899999964321                          12356788


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +|+.++++++||||+++++++..++  .+++++|++++++          .+++..+..++.|++.||.|||+.+   ++
T Consensus        95 ~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---iv  169 (373)
T 2qol_A           95 GEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YV  169 (373)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             HHHHHHHhCCCCCCCeEEEEEeeCC--ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            9999999999999999999988765  6888999998754          3667778899999999999999998   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCcc-eeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKL  268 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~  268 (345)
                      ||||||+||+++.++.+||+|||++......... .......++..|+|||.+.+..++.++||| ||+++|||++ |..
T Consensus       170 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~  249 (373)
T 2qol_A          170 HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER  249 (373)
T ss_dssp             CSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-C
T ss_pred             CCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999876443211 112223457789999999998999999999 9999999998 999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQI  343 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l  343 (345)
                      ||...    ........+......+.+             ......+.+++..||+.||++||++.+|++.|+++
T Consensus       250 P~~~~----~~~~~~~~i~~~~~~~~~-------------~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~  307 (373)
T 2qol_A          250 PYWEM----SNQDVIKAVDEGYRLPPP-------------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL  307 (373)
T ss_dssp             TTTTC----CHHHHHHHHHTTEECCCC-------------TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCC----CHHHHHHHHHcCCCCCCC-------------ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence            96432    333333333322211111             12234578899999999999999999999999887


No 58 
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=2.8e-42  Score=307.11  Aligned_cols=255  Identities=23%  Similarity=0.379  Sum_probs=187.9

Q ss_pred             HHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           43 FLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQS  122 (345)
Q Consensus        43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (345)
                      ++...++|++.+.||+|+||.||+|+++    ..||+|.+.....+                         ....+.+.+
T Consensus        19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~----~~vavK~~~~~~~~-------------------------~~~~~~~~~   69 (289)
T 3og7_A           19 WEIPDGQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPT-------------------------PQQLQAFKN   69 (289)
T ss_dssp             CBCCTTSCEEEEEEEECSSEEEEEEESS----SEEEEEEESCSSCC-------------------------HHHHHHHHH
T ss_pred             CccCccceeeeeEecCCCCeEEEEEEEc----CceEEEEEeccCCC-------------------------HHHHHHHHH
Confidence            3557789999999999999999999853    24999999754433                         233567889


Q ss_pred             HHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 046907          123 EINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPRIIH  192 (345)
Q Consensus       123 E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH  192 (345)
                      |+.+++.++||||++++++...+   ..+++++++.+++          .+++..+..++.|++.||.|||+.+   ++|
T Consensus        70 E~~~l~~l~h~~iv~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H  143 (289)
T 3og7_A           70 EVGVLRKTRHVNILLFMGYSTAP---QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIH  143 (289)
T ss_dssp             HHHHHTTCCCTTBCCEEEEECSS---SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred             HHHHHHhCCCCcEEEEEeeccCC---ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccc
Confidence            99999999999999999976443   3778888887643          3667778899999999999999998   999


Q ss_pred             cCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccc---ccccCccchhh-HHHHHHHHHhCCC
Q 046907          193 RDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ---MLTLTEKCDIY-FGALLAGLVMGKL  268 (345)
Q Consensus       193 ~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~---~~~~~~~~Dvw-lG~vl~el~tg~~  268 (345)
                      |||||+||+++.++.++|+|||++................||+.|+|||.+.   +..++.++||| +|+++|+|++|..
T Consensus       144 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~  223 (289)
T 3og7_A          144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL  223 (289)
T ss_dssp             SCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCC
Confidence            9999999999999999999999997654322222334567899999999986   55688899999 9999999999999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ||....   ........+......+...         .........+.+++..||+.||.+|||+.++++.|+++.
T Consensus       224 p~~~~~---~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          224 PYSNIN---NRDQIIEMVGRGSLSPDLS---------KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             TTSSCC---CHHHHHHHHHHTSCCCCTT---------SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             Cccccc---hHHHHHHHhcccccCcchh---------hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            975432   2233333333222111111         111223345788999999999999999999999999985


No 59 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.4e-41  Score=308.89  Aligned_cols=242  Identities=21%  Similarity=0.299  Sum_probs=191.6

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++++.||+|+||.||+|+.+ .+|+.||+|.+.....                        ........+.+|+.+
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~~~~~~~------------------------~~~~~~~~~~~E~~~   58 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVI------------------------IAKDEVAHTVTESRV   58 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHH------------------------HHTTCHHHHHHHHHH
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEeHHHh------------------------hhhhHHHHHHHHHHH
Confidence            468999999999999999999864 5799999999952110                        012235667889999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++..++  .+++++||+.++.+         ++......++.|++.||.|||+.+   ++||||||
T Consensus        59 l~~l~hp~iv~l~~~~~~~~--~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp  133 (337)
T 1o6l_A           59 LQNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKL  133 (337)
T ss_dssp             HHSCCCTTBCCEEEEEECSS--EEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCG
T ss_pred             HHhCCCCcCcceEEEEEeCC--EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCH
Confidence            99999999999999998776  78999999998765         566667789999999999999999   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQH  276 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~  276 (345)
                      +|||++.++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|+| +|+++|||++|..||..    
T Consensus       134 ~NIll~~~g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~----  207 (337)
T 1o6l_A          134 ENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN----  207 (337)
T ss_dssp             GGEEECTTSCEEECCCTTCBCSCCTTC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC----
T ss_pred             HHEEECCCCCEEEeeccchhhcccCCC--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC----
Confidence            999999999999999999975432221  23457899999999999999999999999 99999999999999643    


Q ss_pred             cchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 046907          277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERP-----NSKDVRR  338 (345)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rp-----t~~~ll~  338 (345)
                      .+.......+...   ...       .+.    .....+.+++..||+.||++||     ++.++++
T Consensus       208 ~~~~~~~~~i~~~---~~~-------~p~----~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          208 QDHERLFELILME---EIR-------FPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             SSHHHHHHHHHHC---CCC-------CCT----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CCHHHHHHHHHcC---CCC-------CCC----CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            2333333322211   110       001    1123467888999999999999     8888875


No 60 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=2.6e-42  Score=325.99  Aligned_cols=246  Identities=25%  Similarity=0.378  Sum_probs=197.4

Q ss_pred             hhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           41 LAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQI  120 (345)
Q Consensus        41 ~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (345)
                      ..|..+.++|++.+.||+|+||.||+|++   .|..||||.++...                             ..+.+
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~---~~~~vavK~~~~~~-----------------------------~~~~~  233 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDA-----------------------------TAQAF  233 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEE---TTEEEEEEEESSCT-----------------------------TSHHH
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEe---cCCeEEEEEeCCch-----------------------------HHHHH
Confidence            44667889999999999999999999997   47799999996532                             14567


Q ss_pred             HHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 046907          121 QSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCPR  189 (345)
Q Consensus       121 ~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~~  189 (345)
                      .+|+.++++++||||+++++++...+ ..+++++|++.++++           ++......++.|++.||.|||+.+   
T Consensus       234 ~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---  309 (450)
T 1k9a_A          234 LAEASVMTQLRHSNLVQLLGVIVEEK-GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---  309 (450)
T ss_dssp             HHHHHHHHTCCCTTBCCEEEEEECTT-SCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHHHHHHhccCCCEEEEEEEEEcCC-CceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            88999999999999999999887654 258899999988654           456667789999999999999998   


Q ss_pred             eEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CC
Q 046907          190 IIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GK  267 (345)
Q Consensus       190 iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~  267 (345)
                      ++||||||+|||++.++.+||+|||+++.....     .....++..|+|||.+.+..++.++||| ||+++|||++ |.
T Consensus       310 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~  384 (450)
T 1k9a_A          310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR  384 (450)
T ss_dssp             EECSCCCGGGEEECTTSCEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             eeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999854322     1223678899999999999999999999 9999999998 99


Q ss_pred             CCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          268 LPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       268 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      .||...    ...+....+........+             ..+...+.++|..||+.||++|||+.++++.|+.+.
T Consensus       385 ~P~~~~----~~~~~~~~i~~~~~~~~p-------------~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~  444 (450)
T 1k9a_A          385 VPYPRI----PLKDVVPRVEKGYKMDAP-------------DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR  444 (450)
T ss_dssp             CSSTTS----CTTTHHHHHHTTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCC----CHHHHHHHHHcCCCCCCC-------------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            997543    223333333322211111             122345778999999999999999999999999875


No 61 
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=3.7e-42  Score=309.71  Aligned_cols=259  Identities=19%  Similarity=0.277  Sum_probs=191.4

Q ss_pred             hhHHhhcCCcccccccccCcceeeEEEEecCC--CCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 046907           41 LAFLEKKGGLASLEKIGSGGCGEVYKAELPGQ--NGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMR  118 (345)
Q Consensus        41 ~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (345)
                      ..+..+.++|.+.+.||+|+||.||+|++...  ++..||+|.+......                         ....+
T Consensus        27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~   81 (313)
T 3brb_A           27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS-------------------------QREIE   81 (313)
T ss_dssp             TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC-------------------------HHHHH
T ss_pred             HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc-------------------------hhHHH
Confidence            33466888999999999999999999987533  4668999998643222                         23356


Q ss_pred             HHHHHHHHHhhccCCCccceeEEEecCCcc---eeeeeccccCCCC---------------CCCHHHHHHHHHHHHHHHH
Q 046907          119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCH---LLYILNDVSQGRR---------------ELDWLARHRIALGLACGLE  180 (345)
Q Consensus       119 ~~~~E~~~l~~l~hpniv~l~~~~~~~~~~---~l~~~~~~~~~~~---------------~l~~~~~~~i~~~i~~~l~  180 (345)
                      .+.+|+.++++++||||+++++++...+..   ..+++++++.+++               .+++..+..++.|++.||.
T Consensus        82 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~  161 (313)
T 3brb_A           82 EFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME  161 (313)
T ss_dssp             HHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHH
Confidence            788999999999999999999998876533   4588889887653               3677788899999999999


Q ss_pred             HHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHH
Q 046907          181 YLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL  259 (345)
Q Consensus       181 ~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~v  259 (345)
                      |||+.+   ++||||||+||+++.++.+||+|||++................+++.|+|||.+.+..++.++||| +|++
T Consensus       162 ~LH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  238 (313)
T 3brb_A          162 YLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT  238 (313)
T ss_dssp             HHHTTT---CCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHH
T ss_pred             HHHhCC---cccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHH
Confidence            999998   999999999999999999999999999866443322223345678899999999998999999999 9999


Q ss_pred             HHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          260 LAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       260 l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      +|+|++ |..||...    ........+........             .......+.+++..||+.||.+|||+.++++
T Consensus       239 l~el~~~g~~p~~~~----~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  301 (313)
T 3brb_A          239 MWEIATRGMTPYPGV----QNHEMYDYLLHGHRLKQ-------------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRL  301 (313)
T ss_dssp             HHHHHTTSCCSSTTC----CGGGHHHHHHTTCCCCC-------------BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhcCCCCCccC----CHHHHHHHHHcCCCCCC-------------CccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            999999 88996542    23333333322211111             1112235788999999999999999999999


Q ss_pred             HHhhhh
Q 046907          339 MLSQIQ  344 (345)
Q Consensus       339 ~L~~l~  344 (345)
                      .|+++.
T Consensus       302 ~L~~l~  307 (313)
T 3brb_A          302 QLEKLL  307 (313)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999874


No 62 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.8e-42  Score=310.25  Aligned_cols=241  Identities=20%  Similarity=0.240  Sum_probs=192.8

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.. .++..||+|.+....                            .....+.+|+.+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~----------------------------~~~~~~~~E~~~   54 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVET-SSKKTYMAKFVKVKG----------------------------TDQVLVKKEISI   54 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCCT----------------------------HHHHHHHHHHHH
T ss_pred             hhceEeeeEEecCCCeEEEEEEEC-CCCcEEEEEEEecCc----------------------------ccHHHHHHHHHH
Confidence            468999999999999999999864 579999999986432                            123457789999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      ++.++||||+++++++...+  .+++++|++++++          .+++.....++.|++.||.|||+.+   ++|||||
T Consensus        55 l~~l~hpnIv~~~~~~~~~~--~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlk  129 (321)
T 1tki_A           55 LNIARHRNILHLHESFESME--ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIR  129 (321)
T ss_dssp             HHHSCCTTBCCEEEEEEETT--EEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCC
T ss_pred             HHhCCCCCCCeEeEEEecCC--EEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCC
Confidence            99999999999999998776  7899999998754          3677788899999999999999999   9999999


Q ss_pred             CCCeeecC--CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          197 PVNVLLDD--DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       197 ~~nil~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      |+||+++.  ++.+||+|||++........   .....||+.|+|||++.+..++.++||| +|+++|+|++|..||.. 
T Consensus       130 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~-  205 (321)
T 1tki_A          130 PENIIYQTRRSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA-  205 (321)
T ss_dssp             GGGEEESSSSCCCEEECCCTTCEECCTTCE---EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC-
T ss_pred             HHHEEEccCCCCCEEEEECCCCeECCCCCc---cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC-
Confidence            99999986  78999999999987654332   2346789999999999998899999999 99999999999999743 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         .........+....   ...   +...    .+.....+.+++..||+.||.+|||+.++++
T Consensus       206 ---~~~~~~~~~i~~~~---~~~---~~~~----~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          206 ---ETNQQIIENIMNAE---YTF---DEEA----FKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             ---SSHHHHHHHHHHTC---CCC---CHHH----HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---CCHHHHHHHHHcCC---CCC---Chhh----hccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               23333333332221   110   0000    0112235788999999999999999999986


No 63 
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=7.3e-42  Score=317.84  Aligned_cols=265  Identities=15%  Similarity=0.195  Sum_probs=205.2

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|++. .+|+.||||.+......                          ...+.+.+|+.+
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~--------------------------~~~~~~~~E~~~   60 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFL--------------------------RPVDVQMREFEV   60 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECGGGGG--------------------------SCHHHHHHHHHH
T ss_pred             CCceEEEEEEEcCCCeEEEEEEEC-CCCcEEEEEEecccccc--------------------------chHHHHHHHHHH
Confidence            468999999999999999999964 57999999998632211                          114556789999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE------------LDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~------------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      +++++||||+++++++...+....+++++++.++++            +++.....++.|++.||.|||+.+   ++|||
T Consensus        61 l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~D  137 (396)
T 4eut_A           61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRN  137 (396)
T ss_dssp             HHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCC
T ss_pred             HHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECC
Confidence            999999999999999988776678999999987532            778888999999999999999999   99999


Q ss_pred             CCCCCeee----cCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc--------cccCccchhh-HHHHHH
Q 046907          195 LNPVNVLL----DDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM--------LTLTEKCDIY-FGALLA  261 (345)
Q Consensus       195 lk~~nil~----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~--------~~~~~~~Dvw-lG~vl~  261 (345)
                      |||+||++    +.++.+||+|||++.......   ......||..|+|||.+.+        ..++.++||| +|+++|
T Consensus       138 lkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~  214 (396)
T 4eut_A          138 IKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY  214 (396)
T ss_dssp             CCGGGEEEEECTTSCEEEEECCGGGCEECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHH
T ss_pred             cCHHHEEEeecCCCceeEEEecCCCceEccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHH
Confidence            99999999    777789999999998765432   2234679999999999875        4678899999 999999


Q ss_pred             HHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCcc---------ccc--cccCCCcHHHHHHHHHHHhhccCCCCCCC
Q 046907          262 GLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRA---------IDS--KLVGNGCEEQMLLVLKIACFCTLEDPNER  330 (345)
Q Consensus       262 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~~~~~~~~l~~li~~Cl~~dp~~R  330 (345)
                      ||++|..||...............+............         ...  +............+.+++..||+.||++|
T Consensus       215 el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R  294 (396)
T 4eut_A          215 HAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKC  294 (396)
T ss_dssp             HHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTS
T ss_pred             HHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhh
Confidence            9999999986544433333333322222111111000         000  11123346677888999999999999999


Q ss_pred             CCHHHHHHHHhhhh
Q 046907          331 PNSKDVRRMLSQIQ  344 (345)
Q Consensus       331 pt~~~ll~~L~~l~  344 (345)
                      ||+.++++.++++.
T Consensus       295 ~s~~e~l~~l~~il  308 (396)
T 4eut_A          295 WGFDQFFAETSDIL  308 (396)
T ss_dssp             CCHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHh
Confidence            99999999998763


No 64 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=6.4e-42  Score=305.67  Aligned_cols=253  Identities=23%  Similarity=0.379  Sum_probs=193.5

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.. .++..||+|.+.......                        ......+.+|+.+
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~------------------------~~~~~~~~~e~~~   64 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDT-ILNIKVAIKAIFIPPREK------------------------EETLKRFEREVHN   64 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEET-TTCSEEEEEEEECCSSCC------------------------HHHHHHHHHHHHH
T ss_pred             hccEEEEEEEccCCCEEEEEEEEC-CCCCeEEEEEeccCcccc------------------------HHHHHHHHHHHHH
Confidence            468999999999999999999854 578999999986543322                        2336678899999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++..++  .+++++++++++++         +++.....++.|++.||.|||+.+   ++||||||
T Consensus        65 l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp  139 (294)
T 4eqm_A           65 SSQLSHQNIVSMIDVDEEDD--CYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKP  139 (294)
T ss_dssp             HTTCCBTTBCCEEEEEECSS--EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCG
T ss_pred             HhcCCCCCCceEEEeeeeCC--eEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCH
Confidence            99999999999999988766  78999999988654         567777889999999999999999   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQH  276 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~  276 (345)
                      +||+++.++.+||+|||++........ .......||+.|+|||.+.+..++.++||| +|+++|+|++|..||....  
T Consensus       140 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--  216 (294)
T 4eqm_A          140 QNILIDSNKTLKIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET--  216 (294)
T ss_dssp             GGEEECTTSCEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC--
T ss_pred             HHEEECCCCCEEEEeCCCccccccccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--
Confidence            999999999999999999976543321 122346799999999999998999999999 9999999999999975421  


Q ss_pred             cchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHhhh
Q 046907          277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERP-NSKDVRRMLSQI  343 (345)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rp-t~~~ll~~L~~l  343 (345)
                        ....   .........+..  ...    ..+.....+.+++.+||+.||.+|| ++.++.+.|+++
T Consensus       217 --~~~~---~~~~~~~~~~~~--~~~----~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~  273 (294)
T 4eqm_A          217 --AVSI---AIKHIQDSVPNV--TTD----VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV  273 (294)
T ss_dssp             --HHHH---HHHHHSSCCCCH--HHH----SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred             --hHHH---HHHHhhccCCCc--chh----cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence              1111   111111111110  001    1112234577889999999999999 899999999876


No 65 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=3.9e-42  Score=311.37  Aligned_cols=249  Identities=21%  Similarity=0.323  Sum_probs=191.2

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCce----eEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRM----ISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      ..++|++.+.||+|+||.||+|++. .++..    ||+|.+......                          .....+.
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~~~~kv~~K~~~~~~~~--------------------------~~~~~~~   63 (325)
T 3kex_A           11 KETELRKLKVLGSGVFGTVHKGVWI-PEGESIKIPVCIKVIEDKSGR--------------------------QSFQAVT   63 (325)
T ss_dssp             CTTTEEEEEEEECCSSCEEEEEEEC-CTTCSCCEEEEEEEECCTTSC--------------------------SCBCSCC
T ss_pred             CHhHceeeeeeeecCCceEEEEEEc-CCCceEEEEEEEEeccccccH--------------------------HHHHHHH
Confidence            4578999999999999999999975 34554    778877533211                          1123456


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +|+.+++.++||||+++++++..+   ..+++++++.++++          +++..+..++.|++.||.|||+.+   ++
T Consensus        64 ~e~~~l~~l~h~~iv~~~~~~~~~---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iv  137 (325)
T 3kex_A           64 DHMLAIGSLDHAHIVRLLGLCPGS---SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MV  137 (325)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEECBS---SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             HHHHHHhcCCCCCcCeEEEEEcCC---ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC---CC
Confidence            789999999999999999988644   47788899887654          455567789999999999999999   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLP  269 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p  269 (345)
                      ||||||+|||++.++.+||+|||++................||..|+|||.+.+..++.++||| +|+++|+|++ |..|
T Consensus       138 H~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p  217 (325)
T 3kex_A          138 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP  217 (325)
T ss_dssp             CSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCC
Confidence            9999999999999999999999999877554433333456788899999999988999999999 9999999999 9999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      |...    ........+........+.. .            ...+.+++..||+.||.+|||+.++++.|+++.
T Consensus       218 ~~~~----~~~~~~~~~~~~~~~~~~~~-~------------~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          218 YAGL----RLAEVPDLLEKGERLAQPQI-C------------TIDVYMVMVKCWMIDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             TTTS----CTTHHHHHHHTTCBCCCCTT-B------------CTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred             cccc----CHHHHHHHHHcCCCCCCCCc-C------------cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            7542    33334344433222111111 1            112678899999999999999999999998874


No 66 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=9.6e-42  Score=313.23  Aligned_cols=244  Identities=18%  Similarity=0.293  Sum_probs=193.8

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.+ .+|..||+|.+.....+                         ....+.+.+|+.+
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~-------------------------~~~~~~~~~E~~i   81 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINTKKLS-------------------------ARDFQKLEREARI   81 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCC-------------------------HHHHHHHHHHHHH
T ss_pred             ccCeEEeeEEecCCCeEEEEEEEC-CCCCEEEEEEEEcccCC-------------------------HHHHHHHHHHHHH
Confidence            458999999999999999999864 57999999999754332                         2235678899999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++..++  ..+++++++.++.+         +++.....++.|++.||.|||+.+   ++||||||
T Consensus        82 l~~l~hpnIv~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp  156 (362)
T 2bdw_A           82 CRKLQHPNIVRLHDSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKP  156 (362)
T ss_dssp             HHHCCCTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSG
T ss_pred             HHhCCCCCCCeEEEEEEeCC--EEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCch
Confidence            99999999999999998776  78899999988654         567788899999999999999999   99999999


Q ss_pred             CCeeecCC---CCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          198 VNVLLDDD---IEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       198 ~nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      +|||++.+   +.+||+|||++.......   ......||+.|+|||++.+..++.++||| +|+++|+|++|..||.. 
T Consensus       157 ~NIll~~~~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~-  232 (362)
T 2bdw_A          157 ENLLLASKAKGAAVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD-  232 (362)
T ss_dssp             GGEEESCSSTTCCEEECCCTTCBCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC-
T ss_pred             HHEEEecCCCCCCEEEeecCcceEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC-
Confidence            99999864   459999999998765432   22346899999999999998999999999 99999999999999643 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         .+.......+....... +..         ........+.+++..||+.||++|||+.++++
T Consensus       233 ---~~~~~~~~~i~~~~~~~-~~~---------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          233 ---EDQHRLYAQIKAGAYDY-PSP---------EWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             ---SSHHHHHHHHHHTCCCC-CTT---------GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ---CCHHHHHHHHHhCCCCC-Ccc---------cccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence               23333333333222111 100         01112234778999999999999999999875


No 67 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=1.3e-41  Score=306.84  Aligned_cols=255  Identities=24%  Similarity=0.310  Sum_probs=179.3

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.+ .+|..||+|.+......                          .....+.+|+.
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~--------------------------~~~~~~~~E~~   55 (317)
T 2pmi_A            3 SSSQFKQLEKLGNGTYATVYKGLNK-TTGVYVALKEVKLDSEE--------------------------GTPSTAIREIS   55 (317)
T ss_dssp             ----------------CEEEEEECS-SSCCEEEEEEEECCSTT--------------------------CSCHHHHHHHH
T ss_pred             cccceeEeeEECCCCCEEEEEEEEC-CCCcEEEEEEeeccccc--------------------------ccHHHHHHHHH
Confidence            4579999999999999999999854 57999999999654311                          11345678999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCC--------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR--------------RELDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~--------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +++.++||||+++++++..++  .+++++|++++.              ..++...+..++.|++.||.|||+.+   ++
T Consensus        56 ~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---iv  130 (317)
T 2pmi_A           56 LMKELKHENIVRLYDVIHTEN--KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---IL  130 (317)
T ss_dssp             HHTTCCBTTBCCEEEEECCTT--EEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             HHHhcCCCCcceEEEEEEECC--eEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            999999999999999998776  688999999752              23666777889999999999999998   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccc-ccCccchhh-HHHHHHHHHhCCCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQML-TLTEKCDIY-FGALLAGLVMGKLP  269 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~-~~~~~~Dvw-lG~vl~el~tg~~p  269 (345)
                      ||||||+||+++.++.+||+|||++........  ......||+.|+|||.+.+. .++.++||| +|+++|||++|..|
T Consensus       131 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p  208 (317)
T 2pmi_A          131 HRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPL  208 (317)
T ss_dssp             CCCCCGGGEEECTTCCEEECCCSSCEETTSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             eCCCChHHeEEcCCCCEEECcCccceecCCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987643221  22346789999999999764 589999999 99999999999999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccc--------cccc------------cCCCcHHHHHHHHHHHhhccCCCCCC
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAI--------DSKL------------VGNGCEEQMLLVLKIACFCTLEDPNE  329 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~------------~~~~~~~~~~~l~~li~~Cl~~dp~~  329 (345)
                      |..    .+.......+......+......        .+..            ...........+.+++.+||+.||++
T Consensus       209 f~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  284 (317)
T 2pmi_A          209 FPG----TNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDM  284 (317)
T ss_dssp             CCC----SSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGG
T ss_pred             CCC----CChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCccc
Confidence            653    33344444444433222111000        0000            00000112345788999999999999


Q ss_pred             CCCHHHHHH
Q 046907          330 RPNSKDVRR  338 (345)
Q Consensus       330 Rpt~~~ll~  338 (345)
                      |||+.++++
T Consensus       285 Rpt~~e~l~  293 (317)
T 2pmi_A          285 RLSAKQALH  293 (317)
T ss_dssp             SCCHHHHTT
T ss_pred             CCCHHHHhC
Confidence            999999875


No 68 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=1.6e-41  Score=321.37  Aligned_cols=257  Identities=23%  Similarity=0.314  Sum_probs=193.0

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.. .+|+.||||.+......                         .....++.+|+.
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vAiK~~~~~~~~-------------------------~~~~~~~~~E~~  113 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDA-VLDRNVAIKKLSRPFQN-------------------------QTHAKRAYRELV  113 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEET-TTTEEEEEEEEESGGGS-------------------------HHHHHHHHHHHH
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEEC-CCCCEEEEEEECccccC-------------------------hHHHHHHHHHHH
Confidence            3578999999999999999999854 57999999999643211                         233567889999


Q ss_pred             HHhhccCCCccceeEEEecCCc----ceeeeeccccCCC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDC----HLLYILNDVSQGR------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~----~~l~~~~~~~~~~------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++.++||||+++++++...+.    ..+++++|+++++      ..+++..+..++.|++.||.|||+.+   ++||||
T Consensus       114 ~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDl  190 (464)
T 3ttj_A          114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDL  190 (464)
T ss_dssp             HHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCC
T ss_pred             HHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCC
Confidence            9999999999999999876542    4679999999874      23677888899999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      ||+|||++.++.+||+|||+++......   ......||+.|+|||++.+..++.++||| +|+++|||++|..||.+  
T Consensus       191 kp~NIll~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g--  265 (464)
T 3ttj_A          191 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG--  265 (464)
T ss_dssp             CGGGEEECTTSCEEECCCCCC-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC--
T ss_pred             ChHhEEEeCCCCEEEEEEEeeeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCC--
Confidence            9999999999999999999998664432   23457899999999999999999999999 99999999999999754  


Q ss_pred             cccchhhHHHHHHHHhhhcCCCc-------------------------cccccccCCC---cHHHHHHHHHHHhhccCCC
Q 046907          275 QHTNEMSFVKWMRNVMASENPKR-------------------------AIDSKLVGNG---CEEQMLLVLKIACFCTLED  326 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~---~~~~~~~l~~li~~Cl~~d  326 (345)
                        .+..+....+....+.+.+..                         .+.....+..   .......+.+|+.+||+.|
T Consensus       266 --~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~d  343 (464)
T 3ttj_A          266 --RDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID  343 (464)
T ss_dssp             --SSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSS
T ss_pred             --CCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCC
Confidence              333333333333322221100                         0000000000   1112456889999999999


Q ss_pred             CCCCCCHHHHHH
Q 046907          327 PNERPNSKDVRR  338 (345)
Q Consensus       327 p~~Rpt~~~ll~  338 (345)
                      |++|||++|+++
T Consensus       344 P~~R~ta~e~L~  355 (464)
T 3ttj_A          344 PAKRISVDDALQ  355 (464)
T ss_dssp             TTTSCCHHHHHT
T ss_pred             hhhCCCHHHHhc
Confidence            999999999985


No 69 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=6.4e-42  Score=304.69  Aligned_cols=253  Identities=25%  Similarity=0.320  Sum_probs=188.3

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++++.||+|+||.||+|+.  .+|+.||+|.+.....+.                         .....+.+|+.++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~--~~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~E~~~l   54 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN--NYGETFALKKIRLEKEDE-------------------------GIPSTTIREISIL   54 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE--TTSCEEEEEEECCSSGGG-------------------------CCCHHHHHHHHGG
T ss_pred             ccchhhhhcccCCCEEEEEEEc--CCCCEEEEEEEecccccc-------------------------ccchhHHHHHHHH
Confidence            5899999999999999999986  478999999996543221                         1134567899999


Q ss_pred             hhccCCCccceeEEEecCCcceeeeeccccCC---------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 046907          128 GQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG---------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPV  198 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~---------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~  198 (345)
                      +.++||||+++++++..++  .++++++++.+         ...++......++.|++.||.|||+.+   ++||||||+
T Consensus        55 ~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~  129 (288)
T 1ob3_A           55 KELKHSNIVKLYDVIHTKK--RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQ  129 (288)
T ss_dssp             GGCCCTTBCCEEEEEECSS--CEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGG
T ss_pred             HhcCCCCEeeeeeEEccCC--eEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHH
Confidence            9999999999999998776  68888888865         234677888899999999999999998   999999999


Q ss_pred             CeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccc-ccCccchhh-HHHHHHHHHhCCCCCcccccc
Q 046907          199 NVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQML-TLTEKCDIY-FGALLAGLVMGKLPSDKFFQH  276 (345)
Q Consensus       199 nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~-~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~  276 (345)
                      ||+++.++.+||+|||++........  ......||+.|+|||.+.+. .++.++||| +|+++|+|++|..||...   
T Consensus       130 Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~---  204 (288)
T 1ob3_A          130 NLLINREGELKIADFGLARAFGIPVR--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV---  204 (288)
T ss_dssp             GEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS---
T ss_pred             HEEEcCCCCEEEeECccccccCcccc--ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC---
Confidence            99999999999999999976543221  22345789999999999764 489999999 999999999999997542   


Q ss_pred             cchhhHHHHHHHHhhhcCCCcc--------ccccc-------cCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          277 TNEMSFVKWMRNVMASENPKRA--------IDSKL-------VGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-------~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                       ...+....+......+.....        .++..       ...........+.+++.+||+.||++|||+.++++
T Consensus       205 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          205 -SEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             -SHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -CHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence             333333333332222111100        00000       00011122345778999999999999999999975


No 70 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=6.2e-42  Score=314.87  Aligned_cols=272  Identities=16%  Similarity=0.190  Sum_probs=197.7

Q ss_pred             hhcCCcccccccccCcceeeEEEEecCC----CCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPGQ----NGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQI  120 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (345)
                      ...++|++.+.||+|+||.||+|+++..    .++.||||.+........   .+             .+.........+
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~e-------------~~~~~~~~~~~~   95 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLF---TE-------------LKFYQRAAKPEQ   95 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHH---HH-------------HHHHHHHCCHHH
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHH---HH-------------HHHHHhhhhhHH
Confidence            3567999999999999999999987532    368899999865432110   00             011112223456


Q ss_pred             HHHHHHHhhccCCCccceeEEEecCC--cceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 046907          121 QSEINTVGQIRHRNLHPLLAHVTRPD--CHLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHMHHCP  188 (345)
Q Consensus       121 ~~E~~~l~~l~hpniv~l~~~~~~~~--~~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~~~~  188 (345)
                      ..|+..++.++||||+++++++....  ...++++++++ ++          ..+++..+..++.|++.||.|||+.+  
T Consensus        96 ~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--  172 (364)
T 3op5_A           96 IQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE--  172 (364)
T ss_dssp             HHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--
Confidence            67888899999999999999887642  35688999998 53          34778888999999999999999998  


Q ss_pred             CeEecCCCCCCeeec--CCCCeEEeccccceecCCCCcce-----eccCcccCccccccccccccccCccchhh-HHHHH
Q 046907          189 RIIHRDLNPVNVLLD--DDIEARISGFGFARAIPDAHTHI-----TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL  260 (345)
Q Consensus       189 ~iiH~dlk~~nil~~--~~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl  260 (345)
                       ++||||||+|||++  .++.+||+|||+++.........     ......||+.|+|||.+.+..++.++||| ||+++
T Consensus       173 -iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l  251 (364)
T 3op5_A          173 -YVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCM  251 (364)
T ss_dssp             -EECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             -eEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHH
Confidence             99999999999999  88999999999998764322111     11345699999999999999999999999 99999


Q ss_pred             HHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 046907          261 AGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRML  340 (345)
Q Consensus       261 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L  340 (345)
                      |||++|..||.....   .............. ......+..+.....   ...+.+++..||+.||++||++.+|++.|
T Consensus       252 ~el~~g~~Pf~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~li~~cl~~~p~~RP~~~~l~~~l  324 (364)
T 3op5_A          252 IQWLTGHLPWEDNLK---DPKYVRDSKIRYRE-NIASLMDKCFPAANA---PGEIAKYMETVKLLDYTEKPLYENLRDIL  324 (364)
T ss_dssp             HHHHHSCCTTGGGTT---CHHHHHHHHHHHHH-CHHHHHHHHSCTTCC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred             HHHHhCCCCcccccc---CHHHHHHHHHHhhh-hHHHHHHHhcccccC---HHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999864322   12222222211111 111111111111111   23477888889999999999999999999


Q ss_pred             hhh
Q 046907          341 SQI  343 (345)
Q Consensus       341 ~~l  343 (345)
                      +++
T Consensus       325 ~~~  327 (364)
T 3op5_A          325 LQG  327 (364)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            876


No 71 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=9.5e-42  Score=300.25  Aligned_cols=249  Identities=23%  Similarity=0.295  Sum_probs=196.1

Q ss_pred             hhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      .+.++|++.+.||+|+||.||+|++   ++..||+|.+.....+                         ....+.+.+|+
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~---~~~~~avK~~~~~~~~-------------------------~~~~~~~~~E~   58 (271)
T 3kmu_A            7 IDFKQLNFLTKLNENHSGELWKGRW---QGNDIVVKVLKVRDWS-------------------------TRKSRDFNEEC   58 (271)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEE---TTEEEEEEEECCTTCC-------------------------HHHHHHHHHHG
T ss_pred             CCHHHhHHHHHhcCCCcceEEEEEE---CCeeEEEEEecccccC-------------------------HHHHHHHHHHH
Confidence            3567999999999999999999997   4889999999764333                         22356788999


Q ss_pred             HHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 046907          125 NTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCPRIIHR  193 (345)
Q Consensus       125 ~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~  193 (345)
                      .+++.++||||+++++++..++...+++++++++++++           +++..+..++.|++.||.|||+.+ ++++||
T Consensus        59 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~  137 (271)
T 3kmu_A           59 PRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRH  137 (271)
T ss_dssp             GGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTC
T ss_pred             HHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecC
Confidence            99999999999999999988755678999999987543           678888999999999999999975 359999


Q ss_pred             CCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCc---cchhh-HHHHHHHHHhCCCC
Q 046907          194 DLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTE---KCDIY-FGALLAGLVMGKLP  269 (345)
Q Consensus       194 dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~---~~Dvw-lG~vl~el~tg~~p  269 (345)
                      ||||+||+++.++.++++|||++.....       ....||+.|+|||.+.+..++.   ++||| +|+++|||++|..|
T Consensus       138 dikp~Nil~~~~~~~~l~~~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p  210 (271)
T 3kmu_A          138 ALNSRSVMIDEDMTARISMADVKFSFQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP  210 (271)
T ss_dssp             CCSGGGEEECTTSCEEEEGGGSCCTTSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCT
T ss_pred             CCccceEEEcCCcceeEEeccceeeecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999887654322       2357899999999998766544   79999 99999999999999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhhC
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQH  345 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~~  345 (345)
                      |...    ........+..   .....     .    .+......+.+++..||+.||++|||+.++++.|+++.+
T Consensus       211 ~~~~----~~~~~~~~~~~---~~~~~-----~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          211 FADL----SNMEIGMKVAL---EGLRP-----T----IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             TTTS----CHHHHHHHHHH---SCCCC-----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             cccc----ChHHHHHHHHh---cCCCC-----C----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            7542    22222111111   11110     0    111122347788899999999999999999999999864


No 72 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=9.4e-42  Score=305.34  Aligned_cols=261  Identities=17%  Similarity=0.266  Sum_probs=198.1

Q ss_pred             hcCCcccccccccCcceeeEEEEe---cCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAEL---PGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQS  122 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (345)
                      ....|++.+.||+|+||.||+|++   +..+++.||+|.+.....                          ......+.+
T Consensus        19 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~~   72 (302)
T 4e5w_A           19 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--------------------------GNHIADLKK   72 (302)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------------------------------CCHHHHHH
T ss_pred             hhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc--------------------------chhHHHHHH
Confidence            345799999999999999999985   335789999999964321                          112466788


Q ss_pred             HHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 046907          123 EINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRIIH  192 (345)
Q Consensus       123 E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH  192 (345)
                      |+.+++.++||||+++++++..++...+++++++++++++          +++..+..++.|++.||.|||+.+   ++|
T Consensus        73 E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H  149 (302)
T 4e5w_A           73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVH  149 (302)
T ss_dssp             HHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---EEC
T ss_pred             HHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC---ccc
Confidence            9999999999999999999988766678999999988654          566667789999999999999999   999


Q ss_pred             cCCCCCCeeecCCCCeEEeccccceecCCCCcc-eeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCC
Q 046907          193 RDLNPVNVLLDDDIEARISGFGFARAIPDAHTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPS  270 (345)
Q Consensus       193 ~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~  270 (345)
                      +||||+||+++.++.++|+|||++......... .......||..|+|||.+.+..++.++||| +|+++|+|++|..|+
T Consensus       150 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  229 (302)
T 4e5w_A          150 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSD  229 (302)
T ss_dssp             SCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGG
T ss_pred             CCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCC
Confidence            999999999999999999999999877544322 223446788899999999998899999999 999999999999985


Q ss_pred             ccccc--------ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 046907          271 DKFFQ--------HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQ  342 (345)
Q Consensus       271 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~  342 (345)
                      .....        ....................          ..++.....+.+++..||+.||.+|||+.++++.|++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  299 (302)
T 4e5w_A          230 SSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL----------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA  299 (302)
T ss_dssp             GSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCC----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             cchhhHHhhccCCcccccCHHHHHHHHhccCCC----------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            43211        01111111112111111111          1111223457889999999999999999999999998


Q ss_pred             hhC
Q 046907          343 IQH  345 (345)
Q Consensus       343 l~~  345 (345)
                      +.+
T Consensus       300 ll~  302 (302)
T 4e5w_A          300 LLK  302 (302)
T ss_dssp             HHC
T ss_pred             HhC
Confidence            753


No 73 
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=4e-42  Score=324.83  Aligned_cols=251  Identities=23%  Similarity=0.357  Sum_probs=194.9

Q ss_pred             hhhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           40 DLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQ  119 (345)
Q Consensus        40 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (345)
                      ...|....++|++.+.||+|+||.||+|+++  .+..||||.+......                            .+.
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~----------------------------~~~  225 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMS----------------------------PEA  225 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEET--TTEEEEEEECCTTSSC----------------------------HHH
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEEC--CCceEEEEEeccCCCC----------------------------HHH
Confidence            3457778899999999999999999999985  4567999999754321                            345


Q ss_pred             HHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCC
Q 046907          120 IQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCP  188 (345)
Q Consensus       120 ~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~  188 (345)
                      +.+|+.++++++||||+++++++..+   .++++++++.++++           +++.....++.|++.||.|||+.+  
T Consensus       226 ~~~E~~~l~~l~hp~iv~~~~~~~~~---~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--  300 (452)
T 1fmk_A          226 FLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--  300 (452)
T ss_dssp             HHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEcCC---ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            78899999999999999999988653   47899999988654           556667789999999999999998  


Q ss_pred             CeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-C
Q 046907          189 RIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-G  266 (345)
Q Consensus       189 ~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g  266 (345)
                       ++||||||+|||++.++.+||+|||+++........ ......++..|+|||.+.+..++.++||| ||+++|||++ |
T Consensus       301 -ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g  378 (452)
T 1fmk_A          301 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG  378 (452)
T ss_dssp             -CCCSCCSGGGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             -eeCCCCChhhEEECCCCCEEECCCccceecCCCcee-cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCC
Confidence             999999999999999999999999999876433211 12334568899999999988999999999 9999999999 9


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ..||...    ...+....+......+.             ++.+...+.++|..||+.||++|||+.+|++.|+++.
T Consensus       379 ~~P~~~~----~~~~~~~~i~~~~~~~~-------------~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~  439 (452)
T 1fmk_A          379 RVPYPGM----VNREVLDQVERGYRMPC-------------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  439 (452)
T ss_dssp             CCSSTTC----CHHHHHHHHHTTCCCCC-------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             CCCCCCC----CHHHHHHHHHcCCCCCC-------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            9996542    33333333332221111             1122345778999999999999999999999999873


No 74 
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=8.4e-42  Score=307.53  Aligned_cols=260  Identities=22%  Similarity=0.320  Sum_probs=204.3

Q ss_pred             hhhhHHhhcCCcccccccccCcceeeEEEEec----CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 046907           39 KDLAFLEKKGGLASLEKIGSGGCGEVYKAELP----GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLN  114 (345)
Q Consensus        39 ~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (345)
                      ....|....++|++.+.||+|+||.||+|++.    ..+++.||||.+.....                          .
T Consensus        18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~   71 (316)
T 2xir_A           18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--------------------------H   71 (316)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--------------------------H
T ss_pred             cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC--------------------------c
Confidence            34456678889999999999999999999853    24678999999965321                          1


Q ss_pred             HHHHHHHHHHHHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC-------------------------CCHHHH
Q 046907          115 KKMRQIQSEINTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------------------LDWLAR  168 (345)
Q Consensus       115 ~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------------------l~~~~~  168 (345)
                      .....+.+|+.++.++ +||||+++++++..++ ..++++++++.++++                         +++..+
T Consensus        72 ~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (316)
T 2xir_A           72 SEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL  150 (316)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT-SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC-CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHH
Confidence            2356788999999999 7999999999987655 357888899887433                         566778


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc
Q 046907          169 HRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL  248 (345)
Q Consensus       169 ~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~  248 (345)
                      ..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++................||+.|+|||.+.+..+
T Consensus       151 ~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  227 (316)
T 2xir_A          151 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY  227 (316)
T ss_dssp             HHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccc
Confidence            889999999999999998   99999999999999999999999999987654433334445678899999999999899


Q ss_pred             Cccchhh-HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCC
Q 046907          249 TEKCDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLED  326 (345)
Q Consensus       249 ~~~~Dvw-lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~d  326 (345)
                      +.++||| +|+++|+|++ |..||.....   .......+........+             ......+.+++..||+.|
T Consensus       228 ~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~d  291 (316)
T 2xir_A          228 TIQSDVWSFGVLLWEIFSLGASPYPGVKI---DEEFCRRLKEGTRMRAP-------------DYTTPEMYQTMLDCWHGE  291 (316)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCC---SHHHHHHHHHTCCCCCC-------------TTCCHHHHHHHHHHTCSS
T ss_pred             cchhHHHHHHHHHHHHHhCCCCCCcccch---hHHHHHHhccCccCCCC-------------CCCCHHHHHHHHHHcCCC
Confidence            9999999 9999999998 9999754321   22233333222111111             011234778899999999


Q ss_pred             CCCCCCHHHHHHHHhhhh
Q 046907          327 PNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       327 p~~Rpt~~~ll~~L~~l~  344 (345)
                      |.+|||+.++++.|+++.
T Consensus       292 p~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          292 PSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             GGGSCCHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHH
Confidence            999999999999999873


No 75 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=1.1e-41  Score=312.76  Aligned_cols=246  Identities=22%  Similarity=0.290  Sum_probs=182.2

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ....++|++++.||+|+||.||+|+.. .+++.||||.+......                            ...+.+|
T Consensus        16 ~~~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~----------------------------~~~~~~E   66 (361)
T 3uc3_A           16 MHDSDRYDFVKDIGSGNFGVARLMRDK-LTKELVAVKYIERGAAI----------------------------DENVQRE   66 (361)
T ss_dssp             CCCTTTEEEEEEESSSTTSSEEEEEET-TTCCEEEEEEEESSTTS----------------------------CHHHHHH
T ss_pred             CCCCCcEEEEEEeccCCCEEEEEEEEC-CCCcEEEEEEEecCccc----------------------------cHHHHHH
Confidence            346789999999999999999999864 57999999999653221                            2346689


Q ss_pred             HHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          124 INTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      +.+++.++||||+++++++..++  .++++++|+.++++         ++......++.|++.||.|||+.+   ++|||
T Consensus        67 ~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~D  141 (361)
T 3uc3_A           67 IINHRSLRHPNIVRFKEVILTPT--HLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRD  141 (361)
T ss_dssp             HHHHHHCCCTTBCCEEEEEECSS--EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCC
T ss_pred             HHHHHhCCCCCCCcEEEEEeeCC--EEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCC
Confidence            99999999999999999998776  68999999988654         566677889999999999999999   99999


Q ss_pred             CCCCCeeecCCCC--eEEeccccceecCCCCcceeccCcccCccccccccccccccCcc-chhh-HHHHHHHHHhCCCCC
Q 046907          195 LNPVNVLLDDDIE--ARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEK-CDIY-FGALLAGLVMGKLPS  270 (345)
Q Consensus       195 lk~~nil~~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~-~Dvw-lG~vl~el~tg~~p~  270 (345)
                      |||+||+++.++.  +||+|||+++......   ......||+.|+|||++.+..++.+ +||| +|+++|+|++|..||
T Consensus       142 lkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf  218 (361)
T 3uc3_A          142 LKLENTLLDGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF  218 (361)
T ss_dssp             CCGGGEEECSSSSCCEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CCHHHEEEcCCCCceEEEeecCccccccccC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCC
Confidence            9999999987665  9999999987432221   2234679999999999988887655 8999 999999999999998


Q ss_pred             cccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          271 DKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ........   ....+........... ..        ......+.+++.+||+.||++|||+.++++
T Consensus       219 ~~~~~~~~---~~~~~~~~~~~~~~~~-~~--------~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          219 EDPEEPRD---YRKTIQRILSVKYSIP-DD--------IRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             C----CCC---HHHHHHHHHTTCCCCC-TT--------SCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCCccHHH---HHHHHHHHhcCCCCCC-Cc--------CCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            65433222   2233333222111100 00        011234678999999999999999999986


No 76 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1.4e-41  Score=311.63  Aligned_cols=249  Identities=21%  Similarity=0.261  Sum_probs=194.3

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++++.||+|+||.||+|+.+ .+|..||+|.+..........                     ....+.+.+|+.
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~-~~~~~~avK~i~~~~~~~~~~---------------------~~~~~~~~~E~~   67 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREK-STGLEYAAKFIKKRQSRASRR---------------------GVCREEIEREVS   67 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEBCSSTTCSS---------------------SBCHHHHHHHHH
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEEC-CCCCEEEEEEEEccccccccc---------------------hhHHHHHHHHHH
Confidence            3468999999999999999999864 579999999997543321100                     001456788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++..++  .++++++++.++++         +++.....++.|++.||.|||+.+   ++|||||
T Consensus        68 il~~l~hpnIv~l~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlk  142 (361)
T 2yab_A           68 ILRQVLHPNIITLHDVYENRT--DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLK  142 (361)
T ss_dssp             HHTTCCCTTBCCEEEEEECSS--EEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred             HHHhCCCcCCCcEEEEEEeCC--EEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCC
Confidence            999999999999999998766  78999999987654         567778899999999999999998   9999999


Q ss_pred             CCCeeecCCC----CeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCc
Q 046907          197 PVNVLLDDDI----EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSD  271 (345)
Q Consensus       197 ~~nil~~~~~----~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~  271 (345)
                      |+||+++.++    .+||+|||++.......   ......||+.|+|||++.+..++.++||| +|+++|+|++|..||.
T Consensus       143 p~NIll~~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~  219 (361)
T 2yab_A          143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  219 (361)
T ss_dssp             GGGEEESCTTSSSCCEEECCCSSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             HHHEEEeCCCCCccCEEEEecCCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence            9999998776    79999999998765432   23456899999999999998999999999 9999999999999964


Q ss_pred             ccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          272 KFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .    .........+.....   .   +++...    +.....+.+++..||+.||.+|||+.++++
T Consensus       220 ~----~~~~~~~~~i~~~~~---~---~~~~~~----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          220 G----DTKQETLANITAVSY---D---FDEEFF----SQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             C----SSHHHHHHHHHTTCC---C---CCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             C----CCHHHHHHHHHhcCC---C---CCchhc----cCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            3    233333333322111   0   011100    111234778999999999999999999875


No 77 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=2.7e-41  Score=309.13  Aligned_cols=247  Identities=19%  Similarity=0.265  Sum_probs=190.3

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.+ .+|+.||||.+........                      .....+.+.+|+.+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~----------------------~~~~~~~~~~E~~~   79 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINR-ETGQQFAVKIVDVAKFTSS----------------------PGLSTEDLKREASI   79 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHTS----------------------SSCCHHHHHHHHHH
T ss_pred             ccceEEeeEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhhhcccc----------------------ccchHHHHHHHHHH
Confidence            357999999999999999999864 5799999999842110000                      00024568899999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC-------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------LDWLARHRIALGLACGLEYLHMHHCPRIIHR  193 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~  193 (345)
                      ++.++||||+++++++..++  .+++++|++.++++             +++.....++.|++.||.|||+.+   ++||
T Consensus        80 l~~l~hpnIv~~~~~~~~~~--~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHr  154 (351)
T 3c0i_A           80 CHMLKHPHIVELLETYSSDG--MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHR  154 (351)
T ss_dssp             HHHCCCTTBCCEEEEEEETT--EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECS
T ss_pred             HHhCCCCCCCcEEEEEEeCC--EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceec
Confidence            99999999999999998776  78999999998654             566677789999999999999998   9999


Q ss_pred             CCCCCCeeecCCCC---eEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCC
Q 046907          194 DLNPVNVLLDDDIE---ARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP  269 (345)
Q Consensus       194 dlk~~nil~~~~~~---~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p  269 (345)
                      ||||+|||++.++.   +||+|||++........  ......||+.|+|||++.+..++.++||| +|+++|+|++|..|
T Consensus       155 Dlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  232 (351)
T 3c0i_A          155 DVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP  232 (351)
T ss_dssp             CCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCChHHeEEecCCCCCcEEEecCcceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCC
Confidence            99999999986544   99999999987654322  23446899999999999998999999999 99999999999999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      |...    . ......+....   ..   ..+...    +.....+.+++..||+.||++|||+.++++
T Consensus       233 f~~~----~-~~~~~~i~~~~---~~---~~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          233 FYGT----K-ERLFEGIIKGK---YK---MNPRQW----SHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             SCSS----H-HHHHHHHHHTC---CC---CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCc----H-HHHHHHHHcCC---CC---CCcccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            7541    1 22222222111   10   000000    111235778999999999999999999975


No 78 
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1.4e-41  Score=308.01  Aligned_cols=262  Identities=18%  Similarity=0.253  Sum_probs=202.3

Q ss_pred             HhhcCCcccccccccCcceeeEEEEe---cCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAEL---PGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQI  120 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (345)
                      ..+.++|++.+.||+|+||.||+|++   +..++..||||.+....                           ....+.+
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---------------------------~~~~~~~   71 (327)
T 3lxl_A           19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---------------------------PDQQRDF   71 (327)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC---------------------------HHHHHHH
T ss_pred             hhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC---------------------------HHHHHHH
Confidence            34677999999999999999999986   34578999999996542                           2234668


Q ss_pred             HHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          121 QSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       121 ~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      .+|+.+++.++||||+++++++..++...+++++++++++++          +++..+..++.|++.||.|||+.+   +
T Consensus        72 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i  148 (327)
T 3lxl_A           72 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---C  148 (327)
T ss_dssp             HHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             HHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            899999999999999999999987776789999999987654          566777889999999999999998   9


Q ss_pred             EecCCCCCCeeecCCCCeEEeccccceecCCCCcc-eeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCC
Q 046907          191 IHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKL  268 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~  268 (345)
                      +|+||||+||+++.++.+||+|||++......... .......||..|+|||.+.+..++.++||| +|+++|+|++|..
T Consensus       149 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~  228 (327)
T 3lxl_A          149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD  228 (327)
T ss_dssp             ECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999876543322 223345688899999999998899999999 9999999999999


Q ss_pred             CCccccccc-------chhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 046907          269 PSDKFFQHT-------NEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLS  341 (345)
Q Consensus       269 p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~  341 (345)
                      ||.......       ........+.........         ..........+.+++..||+.||.+|||+.++++.|+
T Consensus       229 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  299 (327)
T 3lxl_A          229 KSCSPSAEFLRMMGCERDVPALSRLLELLEEGQR---------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD  299 (327)
T ss_dssp             GGGSHHHHHHHHCC----CCHHHHHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCccccchhhhhcccccccccHHHHHHHhhcccC---------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            964322100       000001111111111110         0111223345788899999999999999999999999


Q ss_pred             hhh
Q 046907          342 QIQ  344 (345)
Q Consensus       342 ~l~  344 (345)
                      .+.
T Consensus       300 ~~~  302 (327)
T 3lxl_A          300 MLW  302 (327)
T ss_dssp             HC-
T ss_pred             HHH
Confidence            874


No 79 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=1.4e-41  Score=299.44  Aligned_cols=250  Identities=23%  Similarity=0.353  Sum_probs=184.8

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      +.++|++.+.||+|+||.||+|++   ++..||||.+.......                       .....+.+.+|+.
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~~e~~   58 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFW---IGDEVAVKAARHDPDED-----------------------ISQTIENVRQEAK   58 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEE---TTEEEEEEEC---------------------------------CHHHHHHHHH
T ss_pred             chhheeeeeeeccCCCeEEEEEEE---cCCeEEEEEEecCCccc-----------------------HHHHHHHHHHHHH
Confidence            567999999999999999999986   58899999986432111                       0223567889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCC--------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR--------ELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~--------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +++.++||||+++++++..++  .++++++++.++.        .+++.....++.|++.||.|||+.+..+++||||||
T Consensus        59 ~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp  136 (271)
T 3dtc_A           59 LFAMLKHPNIIALRGVCLKEP--NLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKS  136 (271)
T ss_dssp             HHHHCCCTTBCCEEEEECCC----CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSG
T ss_pred             HHHhcCCCCEeeEEEEEecCC--ceEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCch
Confidence            999999999999999988766  6788999997753        467778889999999999999999744488999999


Q ss_pred             CCeeecC--------CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCC
Q 046907          198 VNVLLDD--------DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKL  268 (345)
Q Consensus       198 ~nil~~~--------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~  268 (345)
                      +||+++.        ++.++|+|||++.......    .....||+.|+|||.+.+..++.++||| +|+++|+|++|..
T Consensus       137 ~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~  212 (271)
T 3dtc_A          137 SNILILQKVENGDLSNKILKITDFGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV  212 (271)
T ss_dssp             GGEEESSCCSSSCCSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHEEEecccccccccCcceEEccCCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            9999985        6789999999997654332    1245789999999999998899999999 9999999999999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQI  343 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l  343 (345)
                      ||...    ........+..   .... .        .........+.+++.+||+.||.+|||+.++++.|++|
T Consensus       213 p~~~~----~~~~~~~~~~~---~~~~-~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          213 PFRGI----DGLAVAYGVAM---NKLA-L--------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             TTTTS----CHHHHHHHHHT---SCCC-C--------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CCCCC----CHHHHHHhhhc---CCCC-C--------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            97542    22222111111   1110 0        01112234578899999999999999999999999875


No 80 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=5.7e-42  Score=303.87  Aligned_cols=253  Identities=20%  Similarity=0.297  Sum_probs=187.4

Q ss_pred             hHHhhcCCcccccccccCcceeeEEEEecC--CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           42 AFLEKKGGLASLEKIGSGGCGEVYKAELPG--QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQ  119 (345)
Q Consensus        42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (345)
                      ++....++|++.+.||+|+||.||+|++..  ..+..||+|.+.....                          ....+.
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~--------------------------~~~~~~   62 (281)
T 1mp8_A            9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS--------------------------DSVREK   62 (281)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS--------------------------HHHHHH
T ss_pred             ceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC--------------------------HHHHHH
Confidence            345567899999999999999999998753  2356799999864321                          123567


Q ss_pred             HHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 046907          120 IQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPR  189 (345)
Q Consensus       120 ~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~  189 (345)
                      +.+|+.+++.++||||+++++++..+   ..+++++++.+++          .+++.....++.|++.||.|||+.+   
T Consensus        63 ~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---  136 (281)
T 1mp8_A           63 FLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---  136 (281)
T ss_dssp             HHHHHHHHHTCCCTTBCCEEEEECSS---SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHHHHHHHhCCCCccceEEEEEccC---ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            88999999999999999999987543   4778899998754          3667778889999999999999998   


Q ss_pred             eEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CC
Q 046907          190 IIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GK  267 (345)
Q Consensus       190 iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~  267 (345)
                      ++||||||+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||| +|+++|||++ |.
T Consensus       137 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~  215 (281)
T 1mp8_A          137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV  215 (281)
T ss_dssp             CCCSCCSGGGEEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSC
T ss_pred             eecccccHHHEEECCCCCEEECccccccccCccccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCC
Confidence            999999999999999999999999999876443221 22334567899999999988999999999 9999999997 99


Q ss_pred             CCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          268 LPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       268 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      .||...    ...+....+......+.             .+.....+.+++..||+.||++|||+.++++.|+++.
T Consensus       216 ~pf~~~----~~~~~~~~i~~~~~~~~-------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          216 KPFQGV----KNNDVIGRIENGERLPM-------------PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             CTTTTC----CGGGHHHHHHTTCCCCC-------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCcC----CHHHHHHHHHcCCCCCC-------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            997543    22333333332211111             1122234778899999999999999999999999874


No 81 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.3e-41  Score=311.13  Aligned_cols=244  Identities=24%  Similarity=0.317  Sum_probs=187.2

Q ss_pred             hhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      ...++|++++.||+|+||.||+|+.+ .+|+.||+|.+....                        .........+..|.
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~AvK~~~~~~------------------------~~~~~~~~~~~~E~   74 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVK-ETGDLYAVKVLKKDV------------------------ILQDDDVECTMTEK   74 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHH------------------------HHHHTTHHHHHHHH
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEc-CCCCEEEEEEEEHHH------------------------hcchhHHHHHHHHH
Confidence            35679999999999999999999865 579999999995211                        01123356678899


Q ss_pred             HHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          125 NTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       125 ~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      .+++.+ +||||+++++++..++  .+++++||+.++++         +++..+..++.|++.||.|||+.+   ++|||
T Consensus        75 ~il~~~~~hp~Iv~l~~~~~~~~--~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrD  149 (353)
T 3txo_A           75 RILSLARNHPFLTQLFCCFQTPD--RLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG---IIYRD  149 (353)
T ss_dssp             HHHHHTTTCTTBCCEEEEEECSS--EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCC
T ss_pred             HHHHhccCCCceeeEEEEEEeCC--EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccC
Confidence            999988 7999999999998776  78999999998754         566677789999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      |||+|||++.++.+||+|||+++......  ......+||+.|+|||++.+..++.++||| +|+++|||++|..||.. 
T Consensus       150 lkp~NILl~~~g~ikL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-  226 (353)
T 3txo_A          150 LKLDNVLLDHEGHCKLADFGMCKEGICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA-  226 (353)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC-
T ss_pred             CCHHHEEECCCCCEEEccccceeecccCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC-
Confidence            99999999999999999999997543221  133457899999999999998999999999 99999999999999643 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNS------KDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~------~~ll~  338 (345)
                         .+..+....+...   ...   ++     .   .....+.+++..||+.||.+||++      .++++
T Consensus       227 ---~~~~~~~~~i~~~---~~~---~p-----~---~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          227 ---ENEDDLFEAILND---EVV---YP-----T---WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             ---SSHHHHHHHHHHC---CCC---CC-----T---TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             ---CCHHHHHHHHHcC---CCC---CC-----C---CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence               2333333333221   111   00     0   112347788899999999999998      66654


No 82 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=5.5e-41  Score=298.30  Aligned_cols=253  Identities=24%  Similarity=0.447  Sum_probs=192.7

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|++. .+++.||+|.+...........                    ....+.+.+|+.
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~--------------------~~~~~~~~~E~~   75 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEM--------------------IEKFQEFQREVF   75 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEET-TTCCEEEEEECCCCTTTCCHHH--------------------HCCSHHHHHHHH
T ss_pred             hhccceehhccccCCceeEEEEEEc-CCceEEEEEEeeccccccchhH--------------------HHHHHHHHHHHH
Confidence            5679999999999999999999864 5799999999865443221100                    111367889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++.++||||+++++++..+.    +++++++.+++          .+++.....++.|++.||.|||+.+ .+++||||
T Consensus        76 ~l~~l~h~~i~~~~~~~~~~~----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~di  150 (287)
T 4f0f_A           76 IMSNLNHPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDL  150 (287)
T ss_dssp             HHTTCCCTTBCCEEEEETTTT----EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCC
T ss_pred             HHHhCCCCCchhhheeecCCC----eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCC
Confidence            999999999999999986654    47888887654          3677788899999999999999986 34999999


Q ss_pred             CCCCeeecCCCC-----eEEeccccceecCCCCcceeccCcccCcccccccccc--ccccCccchhh-HHHHHHHHHhCC
Q 046907          196 NPVNVLLDDDIE-----ARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ--MLTLTEKCDIY-FGALLAGLVMGK  267 (345)
Q Consensus       196 k~~nil~~~~~~-----~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~--~~~~~~~~Dvw-lG~vl~el~tg~  267 (345)
                      ||+||+++.++.     +||+|||++......     .....||+.|+|||.+.  ...++.++||| +|+++|+|++|.
T Consensus       151 kp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~  225 (287)
T 4f0f_A          151 RSPNIFLQSLDENAPVCAKVADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE  225 (287)
T ss_dssp             SGGGEEESCCCTTCSCCEEECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSS
T ss_pred             CcceEEEeccCCCCceeEEeCCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCC
Confidence            999999987766     999999999754332     23467899999999994  44578899999 999999999999


Q ss_pred             CCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 046907          268 LPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQI  343 (345)
Q Consensus       268 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l  343 (345)
                      .||.....  ........+....   .. .        .........+.+++..||+.||++|||+.++++.|++|
T Consensus       226 ~pf~~~~~--~~~~~~~~~~~~~---~~-~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          226 GPFDEYSY--GKIKFINMIREEG---LR-P--------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             CTTTTCCC--CHHHHHHHHHHSC---CC-C--------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             CCCccccc--cHHHHHHHHhccC---CC-C--------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            99864322  1112222222111   11 0        01112234578899999999999999999999999875


No 83 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=1e-41  Score=315.68  Aligned_cols=247  Identities=22%  Similarity=0.284  Sum_probs=187.5

Q ss_pred             hhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      ...++|++++.||+|+||.||+|+.+ .+++.||+|.+.......                        ......+..|.
T Consensus        49 ~~~~~y~~~~~LG~G~fG~V~~~~~~-~~~~~~AvK~~~k~~~~~------------------------~~~~~~~~~E~  103 (396)
T 4dc2_A           49 LGLQDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMRVVKKELVND------------------------DEDIDWVQTEK  103 (396)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEGGGTC----------------------------CCHHHHHH
T ss_pred             CChhHcEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhhhccC------------------------HHHHHHHHHHH
Confidence            35678999999999999999999965 579999999996432211                        12245567889


Q ss_pred             HHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          125 NTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       125 ~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      .++.++ +||||+++++++..++  .+++++||+.++.+         +++..+..++.|++.||.|||+.+   |+|||
T Consensus       104 ~il~~~~~hp~Iv~l~~~~~~~~--~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrD  178 (396)
T 4dc2_A          104 HVFEQASNHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRD  178 (396)
T ss_dssp             HHHHHHTTCTTBCCEEEEEECSS--EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCC
T ss_pred             HHHHhcCCCCCcCeeEEEEEECC--EEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecc
Confidence            999887 8999999999998776  78999999998754         566677789999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      |||+|||++.++.+||+|||+++......  ......+||+.|+|||++.+..++.++||| +|+++|||++|..||...
T Consensus       179 LKp~NILl~~~g~ikL~DFGla~~~~~~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~  256 (396)
T 4dc2_A          179 LKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV  256 (396)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCBCCCCTT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred             CCHHHEEECCCCCEEEeecceeeecccCC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence            99999999999999999999997532221  234557899999999999999999999999 999999999999998542


Q ss_pred             ccccch-hhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCH
Q 046907          274 FQHTNE-MSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNS  333 (345)
Q Consensus       274 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~  333 (345)
                      ...... ......+..........      .+    ......+.+++..||+.||.+||++
T Consensus       257 ~~~~~~~~~~~~~~~~~i~~~~~~------~p----~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          257 GSSDNPDQNTEDYLFQVILEKQIR------IP----RSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             TC------CCHHHHHHHHHHCCCC------CC----TTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             ccccccchhhHHHHHHHHhccccC------CC----CcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            211110 11111111111111110      00    1112347788999999999999996


No 84 
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1.1e-41  Score=307.68  Aligned_cols=256  Identities=16%  Similarity=0.287  Sum_probs=201.3

Q ss_pred             hhhHHhhcCCcccccccccCcceeeEEEEecC----CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 046907           40 DLAFLEKKGGLASLEKIGSGGCGEVYKAELPG----QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNK  115 (345)
Q Consensus        40 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (345)
                      ..+|....++|++.+.||+|+||.||+|++.+    .++..||+|.+.....                          ..
T Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~--------------------------~~   70 (322)
T 1p4o_A           17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS--------------------------MR   70 (322)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC--------------------------HH
T ss_pred             hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC--------------------------HH
Confidence            44667788899999999999999999998652    3578899999864321                          12


Q ss_pred             HHHHHHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCCC-------------------CHHHHHHHHHHHH
Q 046907          116 KMRQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRREL-------------------DWLARHRIALGLA  176 (345)
Q Consensus       116 ~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~l-------------------~~~~~~~i~~~i~  176 (345)
                      ....+.+|+.+++.++||||+++++++..++  ..+++++++.++++.                   ++..+..++.|++
T Consensus        71 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~  148 (322)
T 1p4o_A           71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA  148 (322)
T ss_dssp             HHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeeEEEEccCC--ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHH
Confidence            3456889999999999999999999987765  678899999886543                   4556677999999


Q ss_pred             HHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-
Q 046907          177 CGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-  255 (345)
Q Consensus       177 ~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-  255 (345)
                      .||.|||+.+   ++||||||+||+++.++.+||+|||++................||+.|+|||.+.+..++.++||| 
T Consensus       149 ~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  225 (322)
T 1p4o_A          149 DGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWS  225 (322)
T ss_dssp             HHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             HHHHHHHHCC---CccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHH
Confidence            9999999999   999999999999999999999999999865443322233445678899999999988899999999 


Q ss_pred             HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHH
Q 046907          256 FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSK  334 (345)
Q Consensus       256 lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~  334 (345)
                      +|+++|+|++ |..||...    ...+....+........             .......+.+++..||+.||.+|||+.
T Consensus       226 lG~il~el~~~g~~p~~~~----~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~li~~~l~~dp~~Rps~~  288 (322)
T 1p4o_A          226 FGVVLWEIATLAEQPYQGL----SNEQVLRFVMEGGLLDK-------------PDNCPDMLFELMRMCWQYNPKMRPSFL  288 (322)
T ss_dssp             HHHHHHHHHHTSCCTTTTS----CHHHHHHHHHTTCCCCC-------------CTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHHHHhcCCCccccC----CHHHHHHHHHcCCcCCC-------------CCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence            9999999999 89996432    23333333322111110             112223477889999999999999999


Q ss_pred             HHHHHHhhh
Q 046907          335 DVRRMLSQI  343 (345)
Q Consensus       335 ~ll~~L~~l  343 (345)
                      ++++.|+++
T Consensus       289 e~l~~L~~~  297 (322)
T 1p4o_A          289 EIISSIKEE  297 (322)
T ss_dssp             HHHHHHGGG
T ss_pred             HHHHHHHHh
Confidence            999999886


No 85 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=6.4e-42  Score=300.96  Aligned_cols=249  Identities=22%  Similarity=0.343  Sum_probs=198.2

Q ss_pred             HHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           43 FLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQS  122 (345)
Q Consensus        43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (345)
                      |..+.++|++.+.||+|+||.||+|++.  ++..||+|.+......                            .+.+.+
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vaiK~~~~~~~~----------------------------~~~~~~   52 (267)
T 3t9t_A            3 WVIDPSELTFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREGAMS----------------------------EEDFIE   52 (267)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEET--TTEEEEEEEECTTTBC----------------------------HHHHHH
T ss_pred             eEEchhheeeeeEecCCCceeEEEEEec--CCCeEEEEEccccCCC----------------------------HHHHHH
Confidence            4567789999999999999999999975  6788999999754322                            245778


Q ss_pred             HHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 046907          123 EINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRIIH  192 (345)
Q Consensus       123 E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH  192 (345)
                      |+.+++.++||||+++++++..++  .+++++++++++++          +++.....++.|++.||.|||+.+   ++|
T Consensus        53 e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H  127 (267)
T 3t9t_A           53 EAEVMMKLSHPKLVQLYGVCLEQA--PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH  127 (267)
T ss_dssp             HHHHHHTCCCTTBCCEEEEECSSS--SCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred             HHHHHHhCCCCCEeeEEEEEccCC--CeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC---ccc
Confidence            999999999999999999988765  58889999987543          567777889999999999999999   999


Q ss_pred             cCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCCCC
Q 046907          193 RDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPS  270 (345)
Q Consensus       193 ~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p~  270 (345)
                      +||||+||+++.++.++|+|||++........ .......++..|+|||.+.+..++.++||| +|+++|+|++ |..||
T Consensus       128 ~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  206 (267)
T 3t9t_A          128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY  206 (267)
T ss_dssp             SSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCCchheEEECCCCCEEEcccccccccccccc-cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCC
Confidence            99999999999999999999999976543211 122335677889999999988899999999 9999999999 89996


Q ss_pred             cccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          271 DKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ..    .........+........+             ......+.+++.+||+.||++|||+.++++.|+++.
T Consensus       207 ~~----~~~~~~~~~i~~~~~~~~~-------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (267)
T 3t9t_A          207 EN----RSNSEVVEDISTGFRLYKP-------------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  263 (267)
T ss_dssp             TT----CCHHHHHHHHHTTCCCCCC-------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CC----CCHHHHHHHHhcCCcCCCC-------------ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            43    2333333333222111111             111234778899999999999999999999999885


No 86 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=6.1e-42  Score=310.73  Aligned_cols=253  Identities=16%  Similarity=0.190  Sum_probs=195.8

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .+|+.||||.+.....                             ...+.+|+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~-----------------------------~~~~~~E~~   56 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNL-YTNEYVAIKLEPMKSR-----------------------------APQLHLEYR   56 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEET-TTTEEEEEEEEETTCS-----------------------------SCCHHHHHH
T ss_pred             EcCCeEEEEEeeccCCceEEEEEEC-CCCcEEEEEEeccccc-----------------------------hHHHHHHHH
Confidence            3578999999999999999999853 5799999999864321                             234668999


Q ss_pred             HHhhc-cCCCccceeEEEecCCcceeeeeccccCC---------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQG---------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~---------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++.+ +||||+++++++..++  ..+++++++.+         +..+++..+..++.|++.||.|||+.+   ++||||
T Consensus        57 ~l~~l~~h~~i~~~~~~~~~~~--~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDl  131 (330)
T 2izr_A           57 FYKQLGSGDGIPQVYYFGPCGK--YNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDV  131 (330)
T ss_dssp             HHHHHCSCTTSCCEEEEEEETT--EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCC
T ss_pred             HHHHhhCCCCCCEEEEEEecCC--ccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCC
Confidence            99999 9999999999988866  78899999932         234677788899999999999999998   999999


Q ss_pred             CCCCeeecCCCC-----eEEeccccceecCCCCcce-----eccCcccCccccccccccccccCccchhh-HHHHHHHHH
Q 046907          196 NPVNVLLDDDIE-----ARISGFGFARAIPDAHTHI-----TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV  264 (345)
Q Consensus       196 k~~nil~~~~~~-----~kl~Dfg~a~~~~~~~~~~-----~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~  264 (345)
                      ||+|||++.++.     +||+|||++..........     ......||+.|+|||.+.+..++.++||| +|+++|||+
T Consensus       132 kp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell  211 (330)
T 2izr_A          132 KPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFL  211 (330)
T ss_dssp             CGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             CHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHh
Confidence            999999998876     9999999998765432211     12457899999999999999999999999 999999999


Q ss_pred             hCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          265 MGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       265 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      +|..||...... ........+......... .     ......+    .+.+++..||+.||.+||++.+|++.|+++.
T Consensus       212 ~g~~Pf~~~~~~-~~~~~~~~i~~~~~~~~~-~-----~~~~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~  280 (330)
T 2izr_A          212 RGSLPWQGLKAD-TLKERYQKIGDTKRATPI-E-----VLCENFP----EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF  280 (330)
T ss_dssp             HSSCTTTTCCCS-SHHHHHHHHHHHHHHSCH-H-----HHTTTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             cCCCCccccccc-cHHHHHHHHHhhhccCCH-H-----HHhccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence            999998654322 222222222222111110 0     0011122    5888999999999999999999999998763


No 87 
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=3.9e-42  Score=310.45  Aligned_cols=257  Identities=21%  Similarity=0.291  Sum_probs=198.0

Q ss_pred             CcccccccccCcceeeEEEEec---CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           49 GLASLEKIGSGGCGEVYKAELP---GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        49 ~~~~~~~iG~G~~g~V~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      .|++++.||+|+||.||+|+++   ..+++.||||.+.....                          ......+.+|+.
T Consensus        32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~~E~~   85 (318)
T 3lxp_A           32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG--------------------------PQHRSGWKQEID   85 (318)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC--------------------------HHHHHHHHHHHH
T ss_pred             HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC--------------------------hHHHHHHHHHHH
Confidence            4599999999999999998764   23688999999965321                          123567889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC--------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE--------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~--------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +++.++||||+++++++...+...+++++++++++++        +++.....++.|++.||.|||+.+   ++|+||||
T Consensus        86 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp  162 (318)
T 3lxp_A           86 ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAA  162 (318)
T ss_dssp             HHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSG
T ss_pred             HHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCch
Confidence            9999999999999999998776789999999987643        677788899999999999999999   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcc-eeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      +||+++.++.+||+|||++......... .......||..|+|||.+.+..++.++||| +|+++|+|++|..||.....
T Consensus       163 ~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~  242 (318)
T 3lxp_A          163 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT  242 (318)
T ss_dssp             GGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH
T ss_pred             heEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccch
Confidence            9999999999999999999877554322 123345688899999999998899999999 99999999999999753221


Q ss_pred             c--------cchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          276 H--------TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       276 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      .        ...................          .........+.+++..||+.||++|||+.++++.|+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  309 (318)
T 3lxp_A          243 KFLELIGIAQGQMTVLRLTELLERGERL----------PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH  309 (318)
T ss_dssp             HHHHHHCSCCHHHHHHHHHHHHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhhhhcccccchhHHHHHHHHhcccCC----------CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            0        0011111111111111110          111222345788999999999999999999999999874


No 88 
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.8e-41  Score=307.30  Aligned_cols=249  Identities=19%  Similarity=0.303  Sum_probs=186.5

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCce----eEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRM----ISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      ..++|++++.||+|+||.||+|++. .++..    ||+|.+......                          .....+.
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~~~~kv~iK~~~~~~~~--------------------------~~~~~~~   65 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSP--------------------------KANKEIL   65 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEEC-CTTCSCCEEEEEEEECCCSSC--------------------------CCHHHHH
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEc-CCCceEEEEEEEEeeccccCH--------------------------HHHHHHH
Confidence            5679999999999999999999865 34554    477776532211                          1245678


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +|+.+++.++||||+++++++..++   .+++++++.++++          ++......++.|++.||.|||+.+   ++
T Consensus        66 ~E~~~l~~l~hp~iv~~~~~~~~~~---~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---iv  139 (327)
T 3lzb_A           66 DEAYVMASVDNPHVCRLLGICLTST---VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV  139 (327)
T ss_dssp             HHHHHHTTCCBTTBCCCCEEEESSS---EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             HHHHHHHhCCCCCeeEEEEEEecCC---ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---Cc
Confidence            8999999999999999999998765   5666777766543          566677889999999999999999   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLP  269 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p  269 (345)
                      ||||||+||+++.++.+||+|||++................||..|+|||.+.+..++.++||| +|+++|+|++ |..|
T Consensus       140 H~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p  219 (327)
T 3lzb_A          140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  219 (327)
T ss_dssp             CSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCC
Confidence            9999999999999999999999999876544333333445678899999999999999999999 9999999999 9999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      |...    ........+......+.+             +.....+.+++..||+.||.+|||+.++++.|+++.
T Consensus       220 ~~~~----~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          220 YDGI----PASEISSILEKGERLPQP-------------PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             TTTC----CGGGHHHHHHTTCCCCCC-------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCC----CHHHHHHHHHcCCCCCCC-------------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            7543    333344433332211111             112234778999999999999999999999999874


No 89 
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=2.5e-41  Score=299.29  Aligned_cols=249  Identities=24%  Similarity=0.400  Sum_probs=197.8

Q ss_pred             hHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           42 AFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      +|....++|++.+.||+|+||.||+|+++  ++..||+|.+......                            .+.+.
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~----------------------------~~~~~   56 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSMS----------------------------PDAFL   56 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET--TTEEEEEEEECTTSSC----------------------------HHHHH
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEc--CCcEEEEEEecCCccc----------------------------HHHHH
Confidence            56677889999999999999999999864  6778999999654322                            34577


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      +|+.+++.++||||+++++++..+   ..+++++++.++++           +++.....++.|++.||.|||+.+   +
T Consensus        57 ~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i  130 (279)
T 1qpc_A           57 AEANLMKQLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y  130 (279)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSS---SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             HHHHHHHhCCCcCcceEEEEEcCC---CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            899999999999999999988644   37889999977543           566777899999999999999999   9


Q ss_pred             EecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCC
Q 046907          191 IHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKL  268 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~  268 (345)
                      +|+||||+||+++.++.+||+|||++......... ......++..|+|||.+.+..++.++||| +|+++|+|++ |..
T Consensus       131 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  209 (279)
T 1qpc_A          131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI  209 (279)
T ss_dssp             ECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eccCCCHhhEEEcCCCCEEECCCcccccccCcccc-cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999876543221 22345667899999999988899999999 9999999999 899


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ||...    ...+....+........             .......+.+++..||+.||++|||+.++++.|+++.
T Consensus       210 p~~~~----~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          210 PYPGM----TNPEVIQNLERGYRMVR-------------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             SSTTC----CHHHHHHHHHTTCCCCC-------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCccc----CHHHHHHHHhcccCCCC-------------cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            96532    22333333322211110             1112235778889999999999999999999999873


No 90 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=1e-41  Score=309.61  Aligned_cols=242  Identities=24%  Similarity=0.373  Sum_probs=188.3

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|.+.+.||+|+||.||+|++. .+++.||+|.+......                        .......+.+|+.
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~------------------------~~~~~~~~~~E~~   61 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHY-KTQQKVALKFISRQLLK------------------------KSDMHMRVEREIS   61 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHHH------------------------HTTCSHHHHHHHH
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEehHHcc------------------------chhHHHHHHHHHH
Confidence            3478999999999999999999964 57999999998521100                        0112456789999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCC--------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR--------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~--------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +++.++||||+++++++..++  .+++++|++.+.        ..+++.....++.|++.||.|||+.+   ++||||||
T Consensus        62 ~l~~l~hpnIv~l~~~~~~~~--~~~lv~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp  136 (336)
T 3h4j_B           62 YLKLLRHPHIIKLYDVITTPT--DIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKP  136 (336)
T ss_dssp             HHTTCCCTTBCCEEEEEECSS--EEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCST
T ss_pred             HHHhCCCCCCCeEEEEEEeCC--EEEEEEECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCch
Confidence            999999999999999998876  688999999432        23567778899999999999999999   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc-Cccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL-TEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~-~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      +||+++.++.+||+|||++.......   ......||+.|+|||.+.+..+ +.++||| +|+++|+|++|..||.....
T Consensus       137 ~NIll~~~~~~kl~DFG~s~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~  213 (336)
T 3h4j_B          137 ENLLLDDNLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI  213 (336)
T ss_dssp             TTEEECTTCCEEECCSSCTBTTTTSB---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSS
T ss_pred             hhEEEcCCCCEEEEEeccceeccCCc---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccH
Confidence            99999999999999999998654432   2244689999999999998776 6899999 99999999999999864322


Q ss_pred             ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          276 HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ..-                ........  ...+......+.+++..||+.||.+|||+.++++
T Consensus       214 ~~~----------------~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          214 PNL----------------FKKVNSCV--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             TTC----------------BCCCCSSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             HHH----------------HHHHHcCC--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            110                00000000  0011112234678999999999999999999875


No 91 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=2e-41  Score=306.93  Aligned_cols=242  Identities=22%  Similarity=0.360  Sum_probs=186.6

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++++.||+|+||.||+|+++ .+|+.||||.+......                          ...+.+.+|+.++
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~E~~~l   58 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNK-VDDCNYAIKRIRLPNRE--------------------------LAREKVMREVKAL   58 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEET-TTCCEEEEEEEECCSTT--------------------------THHHHHHHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEc-CCCcEEEEEEeecCCch--------------------------hHHHHHHHHHHHH
Confidence            57999999999999999999964 57999999999643211                          1256688999999


Q ss_pred             hhccCCCccceeEEEecCCc-------------------------------------------------------ceeee
Q 046907          128 GQIRHRNLHPLLAHVTRPDC-------------------------------------------------------HLLYI  152 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~-------------------------------------------------------~~l~~  152 (345)
                      ++++||||+++++++...+.                                                       ..+++
T Consensus        59 ~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  138 (332)
T 3qd2_B           59 AKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYI  138 (332)
T ss_dssp             TSCCCTTBCCEEEEEEECCSCHHHHHHHC--------------------------------------------CCCEEEE
T ss_pred             HhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEE
Confidence            99999999999998865432                                                       24789


Q ss_pred             eccccCCCCCCCHH------------HHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 046907          153 LNDVSQGRRELDWL------------ARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIP  220 (345)
Q Consensus       153 ~~~~~~~~~~l~~~------------~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~  220 (345)
                      +++++.++++.++.            .+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++....
T Consensus       139 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  215 (332)
T 3qd2_B          139 QMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD  215 (332)
T ss_dssp             EEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECS
T ss_pred             EEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccc
Confidence            99999987654333            36789999999999999998   9999999999999999999999999998775


Q ss_pred             CCCcc----------eeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHH
Q 046907          221 DAHTH----------ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNV  289 (345)
Q Consensus       221 ~~~~~----------~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~  289 (345)
                      .....          .......||+.|+|||.+.+..++.++||| +|+++|||++|..|+..         ....+...
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~---------~~~~~~~~  286 (332)
T 3qd2_B          216 QDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME---------RVRIITDV  286 (332)
T ss_dssp             CC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH---------HHHHHHHH
T ss_pred             cchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH---------HHHHHHHh
Confidence            43211          122346799999999999998999999999 99999999998877311         11111111


Q ss_pred             hhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          290 MASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .....+          .........+.+++..||+.||++|||+.++++
T Consensus       287 ~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          287 RNLKFP----------LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HTTCCC----------HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             hccCCC----------cccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            111111          111233345788999999999999999999986


No 92 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=1.2e-41  Score=315.63  Aligned_cols=265  Identities=19%  Similarity=0.279  Sum_probs=194.4

Q ss_pred             hhhHHhhcCCcccccccccC--cceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 046907           40 DLAFLEKKGGLASLEKIGSG--GCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKM  117 (345)
Q Consensus        40 ~~~~~~~~~~~~~~~~iG~G--~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (345)
                      +.++..+.++|++++.||+|  +||.||+|+.+ .+|+.||||.+.....+                         ....
T Consensus        17 ~s~~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~   70 (389)
T 3gni_B           17 MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYK-PTGEYVTVRRINLEACS-------------------------NEMV   70 (389)
T ss_dssp             -CCCCCCGGGEEEEEEEEEETTTTEEEEEEEET-TTCCEEEEEEEEGGGSC-------------------------HHHH
T ss_pred             hhcccCCCCcEEEEecccCCcCCceEEEEEEEc-CCCCEEEEEEecccccC-------------------------hHHH
Confidence            33455588899999999999  99999999964 57999999999643211                         2335


Q ss_pred             HHHHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcC
Q 046907          118 RQIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHH  186 (345)
Q Consensus       118 ~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~  186 (345)
                      ..+.+|+.+++.++||||+++++++..++  .++++++++.++++           ++...+..++.|++.||.|||+.+
T Consensus        71 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  148 (389)
T 3gni_B           71 TFLQGELHVSKLFNHPNIVPYRATFIADN--ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG  148 (389)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhCCCCCCCcEeEEEEECC--EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            67888999999999999999999998876  78999999987543           566777899999999999999999


Q ss_pred             CCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCc-----ceeccCcccCccccccccccc--cccCccchhh-HHH
Q 046907          187 CPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHT-----HITTSNVVGTVEYIAPEYLQM--LTLTEKCDIY-FGA  258 (345)
Q Consensus       187 ~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~~~gt~~~~aPE~~~~--~~~~~~~Dvw-lG~  258 (345)
                         ++||||||+|||++.++.+||+|||.+........     ........||+.|+|||++.+  ..++.++||| +|+
T Consensus       149 ---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~  225 (389)
T 3gni_B          149 ---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI  225 (389)
T ss_dssp             ---EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHH
T ss_pred             ---eecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHH
Confidence               99999999999999999999999998865432211     111233578999999999987  5689999999 999


Q ss_pred             HHHHHHhCCCCCcccccccchhhHHHHHHHHhhhc----C-CCcc-----------------c---c-----c-cccCCC
Q 046907          259 LLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASE----N-PKRA-----------------I---D-----S-KLVGNG  307 (345)
Q Consensus       259 vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~-----------------~---~-----~-~~~~~~  307 (345)
                      ++|||++|..||.......   .....+.......    . +...                 .   .     . ......
T Consensus       226 il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (389)
T 3gni_B          226 TACELANGHVPFKDMPATQ---MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPY  302 (389)
T ss_dssp             HHHHHHHSSCTTTTCCSTT---HHHHC-----------------------------------------------------
T ss_pred             HHHHHHHCCCCCCCCCHHH---HHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCcc
Confidence            9999999999986432211   1111111000000    0 0000                 0   0     0 000011


Q ss_pred             cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          308 CEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       308 ~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .......+.+++.+||+.||++|||+.++++
T Consensus       303 ~~~~s~~~~~li~~~L~~dP~~Rpta~ell~  333 (389)
T 3gni_B          303 HRTFSPHFHHFVEQCLQRNPDARPSASTLLN  333 (389)
T ss_dssp             ---CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            1223456888999999999999999999985


No 93 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=3.7e-41  Score=310.87  Aligned_cols=245  Identities=20%  Similarity=0.277  Sum_probs=191.0

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.+ .+++.||+|.+.....                        ........+.+|+.
T Consensus        13 ~~~~y~i~~~LG~G~fG~V~~~~~~-~~~~~~AiK~~~~~~~------------------------~~~~~~~~~~~E~~   67 (384)
T 4fr4_A           13 NFDHFEILRAIGKGSFGKVCIVQKN-DTKKMYAMKYMNKQKC------------------------VERNEVRNVFKELQ   67 (384)
T ss_dssp             CGGGEEEEEEEECCTTCCEEEEEET-TTCCEEEEEEEEHHHH------------------------HHTTCHHHHHHHHH
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEehhhc------------------------ccHHHHHHHHHHHH
Confidence            4578999999999999999999864 5799999999852110                        01223567889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++..++  .++++++++.++++         ++...+..++.|++.||.|||+.+   ++|||||
T Consensus        68 il~~l~hp~Iv~l~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlk  142 (384)
T 4fr4_A           68 IMQGLEHPFLVNLWYSFQDEE--DMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMK  142 (384)
T ss_dssp             HHHTCCCTTBCCEEEEEECSS--EEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred             HHHhCCCCCCCcEEEEEEeCC--EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCc
Confidence            999999999999999998776  68999999988643         677778899999999999999999   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc---cccCccchhh-HHHHHHHHHhCCCCCcc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM---LTLTEKCDIY-FGALLAGLVMGKLPSDK  272 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~---~~~~~~~Dvw-lG~vl~el~tg~~p~~~  272 (345)
                      |+|||++.++.+||+|||++.......   ......||+.|+|||++.+   ..++.++||| +|+++|||++|..||..
T Consensus       143 p~NIll~~~g~vkL~DFG~a~~~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~  219 (384)
T 4fr4_A          143 PDNILLDEHGHVHITDFNIAAMLPRET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI  219 (384)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCTTC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             HHHeEECCCCCEEEeccceeeeccCCC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCC
Confidence            999999999999999999998765432   2345789999999999974   4588999999 99999999999999754


Q ss_pred             cccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 046907          273 FFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPN-SKDVRR  338 (345)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt-~~~ll~  338 (345)
                      .... .   ..............           .+......+.+++..||+.||.+||+ +.++++
T Consensus       220 ~~~~-~---~~~~~~~~~~~~~~-----------~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          220 RSST-S---SKEIVHTFETTVVT-----------YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             CTTS-C---HHHHHHHHHHCCCC-----------CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             CCCc-c---HHHHHHHHhhcccC-----------CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            3221 1   22222222111111           01112234788899999999999998 666653


No 94 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=6e-41  Score=297.51  Aligned_cols=244  Identities=18%  Similarity=0.283  Sum_probs=193.1

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.+ .+|..||+|.+.....+                         ......+.+|+.+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~e~~~   58 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINTKKLS-------------------------ARDFQKLEREARI   58 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCC-------------------------HHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEc-CCCceEEEEEeecccCC-------------------------HHHHHHHHHHHHH
Confidence            478999999999999999999864 57999999998643222                         2235678899999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +++++||||+++++++..++  ..+++++++.++.+         ++......++.|++.||.|||+.+   ++||||||
T Consensus        59 l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp  133 (284)
T 3kk8_A           59 CRKLQHPNIVRLHDSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKP  133 (284)
T ss_dssp             HHHCCCTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCG
T ss_pred             HHHcCCCCcCeEEEEEEcCC--EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCH
Confidence            99999999999999998766  68899999988765         677778899999999999999999   99999999


Q ss_pred             CCeeecCCCC---eEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          198 VNVLLDDDIE---ARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       198 ~nil~~~~~~---~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      +||+++.++.   +||+|||++........   .....||+.|+|||.+.+..++.++||| +|+++|+|++|..||.. 
T Consensus       134 ~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~-  209 (284)
T 3kk8_A          134 ENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD-  209 (284)
T ss_dssp             GGEEESSSSTTCCEEECCCTTCEECCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-
T ss_pred             HHEEEecCCCCCcEEEeeceeeEEcccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC-
Confidence            9999986554   99999999987654322   2346789999999999999999999999 99999999999999643 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         .........+.........          .........+.+++..||+.||++|||+.++++
T Consensus       210 ---~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          210 ---EDQHRLYAQIKAGAYDYPS----------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             ---SSHHHHHHHHHHTCCCCCT----------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---CchhHHHHHHHhccccCCc----------hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence               2333333333222111110          001112234778899999999999999999976


No 95 
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.7e-41  Score=307.23  Aligned_cols=245  Identities=20%  Similarity=0.361  Sum_probs=181.7

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|...  ++..||||.+.....+                         ......+.+|+.
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~-------------------------~~~~~~~~~E~~   59 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEAD-------------------------NQTLDSYRNEIA   59 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEECT--TSCEEEEEEEECTTCC-------------------------HHHHHHHHHHHH
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEeC--CCCEEEEEEeeccccc-------------------------hHHHHHHHHHHH
Confidence            5678999999999999999999863  6899999998654322                         233567889999


Q ss_pred             HHhhccC--CCccceeEEEecCCcceeeeeccccCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQIRH--RNLHPLLAHVTRPDCHLLYILNDVSQG--------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~h--pniv~l~~~~~~~~~~~l~~~~~~~~~--------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++.++|  |||+++++++..++  .+++++++..+        ...+++..+..++.|++.||.|||+.+   ++||||
T Consensus        60 ~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDi  134 (343)
T 3dbq_A           60 YLNKLQQHSDKIIRLYDYEITDQ--YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDL  134 (343)
T ss_dssp             HHHHHTTTCTTBCCEEEEEECSS--EEEEEECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCC
T ss_pred             HHHhhhhcCCceEEEeeeEeeCC--EEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence            9999976  99999999998776  68888885432        234677788899999999999999998   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-----------cccCccchhh-HHHHHHHH
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-----------LTLTEKCDIY-FGALLAGL  263 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-----------~~~~~~~Dvw-lG~vl~el  263 (345)
                      ||+|||++ ++.+||+|||++................||+.|+|||++.+           ..++.++||| +|+++|+|
T Consensus       135 kp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~el  213 (343)
T 3dbq_A          135 KPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM  213 (343)
T ss_dssp             CGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHH
T ss_pred             CcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHH
Confidence            99999997 56899999999987654333223345689999999999965           5688899999 99999999


Q ss_pred             HhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          264 VMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       264 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ++|..||.....   .   ...+.......... ..     +...   ...+.+++..||+.||.+|||+.++++
T Consensus       214 l~g~~pf~~~~~---~---~~~~~~~~~~~~~~-~~-----~~~~---~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          214 TYGKTPFQQIIN---Q---ISKLHAIIDPNHEI-EF-----PDIP---EKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             HHSSCTTTTCCS---H---HHHHHHHHCTTSCC-CC-----CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HhCCCcchhhhh---H---HHHHHHHhcCCccc-CC-----cccC---CHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence            999999754222   1   11111111111110 00     0111   234778889999999999999999975


No 96 
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=2.9e-41  Score=306.52  Aligned_cols=256  Identities=21%  Similarity=0.312  Sum_probs=200.8

Q ss_pred             hHHhhcCCcccccccccCcceeeEEEEecCC----CCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 046907           42 AFLEKKGGLASLEKIGSGGCGEVYKAELPGQ----NGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKM  117 (345)
Q Consensus        42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (345)
                      .|....++|++.+.||+|+||.||+|++...    .+..||+|.+.....                          ....
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~   93 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH--------------------------ADEK   93 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC--------------------------HHHH
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC--------------------------hHHH
Confidence            4667788999999999999999999986532    134799999965421                          1235


Q ss_pred             HHHHHHHHHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC-----------------------CCHHHHHHHHH
Q 046907          118 RQIQSEINTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------------------LDWLARHRIAL  173 (345)
Q Consensus       118 ~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------------------l~~~~~~~i~~  173 (345)
                      ..+.+|+.+++.+ +||||+++++++..++  .+++++++++++++                       +++.....++.
T Consensus        94 ~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (333)
T 2i1m_A           94 EALMSELKIMSHLGQHENIVNLLGACTHGG--PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS  171 (333)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCeeeEEEEEecCC--ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHH
Confidence            6788999999999 8999999999988766  58889999987544                       35556678999


Q ss_pred             HHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccch
Q 046907          174 GLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCD  253 (345)
Q Consensus       174 ~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~D  253 (345)
                      |++.||.|||+.+   ++||||||+||+++.++.+||+|||++................||+.|+|||.+.+..++.++|
T Consensus       172 qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  248 (333)
T 2i1m_A          172 QVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD  248 (333)
T ss_dssp             HHHHHHHHHHHTT---EECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHhcCC---cccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHH
Confidence            9999999999998   9999999999999999999999999998664433333334566788999999999889999999


Q ss_pred             hh-HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCC
Q 046907          254 IY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERP  331 (345)
Q Consensus       254 vw-lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rp  331 (345)
                      || +|+++|+|++ |..||.....   .......+........+             ......+.+++..||+.||.+||
T Consensus       249 i~slG~il~el~t~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~~p~~Rp  312 (333)
T 2i1m_A          249 VWSYGILLWEIFSLGLNPYPGILV---NSKFYKLVKDGYQMAQP-------------AFAPKNIYSIMQACWALEPTHRP  312 (333)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTCCS---SHHHHHHHHHTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHHHHHHcCCCCCCcccch---hHHHHHHHhcCCCCCCC-------------CCCCHHHHHHHHHHhccChhhCc
Confidence            99 9999999998 9999754322   22222222222111111             11123477899999999999999


Q ss_pred             CHHHHHHHHhhhh
Q 046907          332 NSKDVRRMLSQIQ  344 (345)
Q Consensus       332 t~~~ll~~L~~l~  344 (345)
                      |+.++++.|+++.
T Consensus       313 s~~~l~~~L~~~~  325 (333)
T 2i1m_A          313 TFQQICSFLQEQA  325 (333)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHH
Confidence            9999999998863


No 97 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=1.7e-41  Score=301.63  Aligned_cols=251  Identities=22%  Similarity=0.368  Sum_probs=201.5

Q ss_pred             hHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           42 AFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      .|....++|++.+.||+|+||.||+|+++ .++..||+|.+.....                            ..+.+.
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~----------------------------~~~~~~   57 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTM----------------------------EVEEFL   57 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEEEEEG-GGTEEEEEEEECSCST----------------------------HHHHHH
T ss_pred             cccccccceeEEeecCCCCceeEEEeEec-CCCEEEEEEecCcCHH----------------------------HHHHHH
Confidence            34557889999999999999999999975 4689999999965322                            245678


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      +|+.+++.++||||+++++++..++  .++++++++.++++           +++..+..++.|++.||.|||+.+   +
T Consensus        58 ~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i  132 (288)
T 3kfa_A           58 KEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F  132 (288)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSSS--SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---C
T ss_pred             HHHHHHHhCCCCCEeeEEEEEccCC--CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---c
Confidence            8999999999999999999987765  58889999986533           667777899999999999999999   9


Q ss_pred             EecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCC
Q 046907          191 IHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKL  268 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~  268 (345)
                      +|+||||+||+++.++.++|+|||++........ .......+|+.|+|||.+.+..++.++||| +|+++|+|++ |..
T Consensus       133 ~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~  211 (288)
T 3kfa_A          133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS  211 (288)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cCCCCCcceEEEcCCCCEEEccCccceeccCCcc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999986654332 223445678899999999988999999999 9999999999 999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ||...    ........+........+             ......+.+++..||+.||.+|||+.++++.|+++.
T Consensus       212 p~~~~----~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~  270 (288)
T 3kfa_A          212 PYPGI----DLSQVYELLEKDYRMERP-------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  270 (288)
T ss_dssp             SSTTC----CGGGHHHHHHTTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCC----CHHHHHHHHhccCCCCCC-------------CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence            96542    333343333332211111             112235788899999999999999999999998873


No 98 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1.3e-40  Score=300.94  Aligned_cols=240  Identities=24%  Similarity=0.347  Sum_probs=191.0

Q ss_pred             CcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046907           49 GLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVG  128 (345)
Q Consensus        49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~  128 (345)
                      .|+..+.||+|+||.||+|+.. .+|+.||||.+......                           ..+.+.+|+.+++
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~-~~g~~vavK~~~~~~~~---------------------------~~~~~~~E~~~l~   97 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREK-HSGRQVAVKMMDLRKQQ---------------------------RRELLFNEVVIMR   97 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCC---------------------------SHHHHHHHHHHHT
T ss_pred             hhhccEEeccCCCeEEEEEEEC-CCCcEEEEEEEeccchh---------------------------HHHHHHHHHHHHH
Confidence            3777889999999999999864 57999999998643211                           1455778999999


Q ss_pred             hccCCCccceeEEEecCCcceeeeeccccCCCC--------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCe
Q 046907          129 QIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR--------ELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNV  200 (345)
Q Consensus       129 ~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~--------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~ni  200 (345)
                      .++||||+++++++...+  .+++++|++.++.        .+++..+..++.|++.||.|||+.+   ++||||||+||
T Consensus        98 ~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NI  172 (321)
T 2c30_A           98 DYQHFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSI  172 (321)
T ss_dssp             TCCCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGE
T ss_pred             hCCCCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHE
Confidence            999999999999998876  6889999998864        3677888899999999999999998   99999999999


Q ss_pred             eecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccccch
Q 046907          201 LLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNE  279 (345)
Q Consensus       201 l~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~  279 (345)
                      +++.++.+||+|||++........  ......||+.|+|||.+.+..++.++||| +|+++|+|++|..||...    ..
T Consensus       173 ll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~----~~  246 (321)
T 2c30_A          173 LLTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD----SP  246 (321)
T ss_dssp             EECTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS----CH
T ss_pred             EECCCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC----CH
Confidence            999999999999999987654322  22456899999999999998999999999 999999999999997432    22


Q ss_pred             hhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          280 MSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ......+..   ...+...        ........+.+++..||+.||++|||+.++++
T Consensus       247 ~~~~~~~~~---~~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          247 VQAMKRLRD---SPPPKLK--------NSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHHHHHHHH---SSCCCCT--------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHhc---CCCCCcC--------ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            233332222   1111100        01112234778899999999999999999986


No 99 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=4.4e-41  Score=306.76  Aligned_cols=246  Identities=22%  Similarity=0.289  Sum_probs=187.6

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.+ .+++.||+|.+.......                        ......+.+|..
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~aiK~~~~~~~~~------------------------~~~~~~~~~E~~   61 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMKVVKKELVND------------------------DEDIDWVQTEKH   61 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEGGGSCS------------------------HHHHHHHHHHHH
T ss_pred             chhheEEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEhHHhcc------------------------hHHHHHHHHHHH
Confidence            3468999999999999999999964 579999999996432211                        223566778999


Q ss_pred             HHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++++ +||||+++++++..++  .++++++++.++.+         ++...+..++.|++.||.|||+.+   ++||||
T Consensus        62 ~l~~~~~hp~iv~l~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDl  136 (345)
T 3a8x_A           62 VFEQASNHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDL  136 (345)
T ss_dssp             HHHHTTTCTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCC
T ss_pred             HHHhcCCCCccCeEEEEEEeCC--EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCC
Confidence            99887 8999999999998776  78999999988754         566667789999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      ||+|||++.++.+||+|||+++......  ......+||+.|+|||++.+..++.++|+| +|+++|||++|..||....
T Consensus       137 kp~NIll~~~g~~kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  214 (345)
T 3a8x_A          137 KLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG  214 (345)
T ss_dssp             CGGGEEECTTSCEEECCGGGCBCSCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTT
T ss_pred             CHHHEEECCCCCEEEEeccccccccCCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcc
Confidence            9999999999999999999997543222  123457899999999999999999999999 9999999999999985422


Q ss_pred             cccch-hhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCH
Q 046907          275 QHTNE-MSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNS  333 (345)
Q Consensus       275 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~  333 (345)
                      ..... ......+..........      .+    ......+.+++..||+.||.+||++
T Consensus       215 ~~~~~~~~~~~~~~~~i~~~~~~------~p----~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          215 SSDNPDQNTEDYLFQVILEKQIR------IP----RSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             C-------CHHHHHHHHHHCCCC------CC----TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             cccccccccHHHHHHHHHcCCCC------CC----CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            11110 01111111111111110      01    1112347788899999999999996


No 100
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=5.2e-41  Score=317.94  Aligned_cols=263  Identities=21%  Similarity=0.285  Sum_probs=180.1

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++++.||+|+||.||+|+.+ .+++.||||.+.....+                         .....++.+|+.+
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~i~~~~~~-------------------------~~~~~~~~~E~~~  105 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDK-LEKRVVAIKKILRVFED-------------------------LIDCKRILREIAI  105 (458)
T ss_dssp             CTTEEECCC-------CEEEEEEC-C--CEEEEEEECSTTSS-------------------------HHHHHHHHHHHHH
T ss_pred             CCCeEEeeEeeecCCeEEEEEEEC-CCCcEEEEEEechhhcC-------------------------HHHHHHHHHHHHH
Confidence            468999999999999999999854 57999999999653322                         2235678899999


Q ss_pred             HhhccCCCccceeEEEecCC---cceeeeeccccCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPD---CHLLYILNDVSQG--------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~---~~~l~~~~~~~~~--------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      ++.++||||+++++++...+   ...++++++++.+        ...++...+..++.|++.||.|||+.+   |+||||
T Consensus       106 l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDl  182 (458)
T 3rp9_A          106 LNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDL  182 (458)
T ss_dssp             HHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCC
T ss_pred             HHhCCCCCCCceEEEEecCCcccCceEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCC
Confidence            99999999999999986543   2468899998864        234788888999999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcc-------------------------eeccCcccCccccccccc-cccccC
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTH-------------------------ITTSNVVGTVEYIAPEYL-QMLTLT  249 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-------------------------~~~~~~~gt~~~~aPE~~-~~~~~~  249 (345)
                      ||+|||++.++.+||+|||+++........                         ......+||+.|+|||++ .+..++
T Consensus       183 Kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~  262 (458)
T 3rp9_A          183 KPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYT  262 (458)
T ss_dssp             CGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCC
T ss_pred             ChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCC
Confidence            999999999999999999999876432110                         123456889999999986 455699


Q ss_pred             ccchhh-HHHHHHHHHh-----------CCCCCccccc----------------ccchhhHHHHHHHHhhhcCCCcc---
Q 046907          250 EKCDIY-FGALLAGLVM-----------GKLPSDKFFQ----------------HTNEMSFVKWMRNVMASENPKRA---  298 (345)
Q Consensus       250 ~~~Dvw-lG~vl~el~t-----------g~~p~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~---  298 (345)
                      .++||| +||++|||++           |.++|.+...                .....+....+....+.+.....   
T Consensus       263 ~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~  342 (458)
T 3rp9_A          263 EAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEAL  342 (458)
T ss_dssp             THHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTS
T ss_pred             cHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhc
Confidence            999999 9999999999           5555433110                01112233333333322211000   


Q ss_pred             -----------cc---ccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          299 -----------ID---SKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       299 -----------~~---~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                                 +.   ........+.....+.+|+.+||+.||++|||++|+++
T Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~  396 (458)
T 3rp9_A          343 EKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA  396 (458)
T ss_dssp             SCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence                       00   00000111222445778999999999999999999986


No 101
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=1.7e-41  Score=302.99  Aligned_cols=253  Identities=16%  Similarity=0.172  Sum_probs=196.4

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .+|+.||||.+.....                             ...+.+|+.
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~-----------------------------~~~~~~e~~   57 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNL-LNNQQVAIKFEPRRSD-----------------------------APQLRDEYR   57 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEET-TTTEEEEEEEEECCTT-----------------------------SCCHHHHHH
T ss_pred             cccceEEEEEEeecCCEEEEEEEEC-CCCcEEEEEEeccCCc-----------------------------cHHHHHHHH
Confidence            3568999999999999999999853 5799999999854321                             234567899


Q ss_pred             HHhhc-cCCCccceeEEEecCCcceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          126 TVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       126 ~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      +++.+ +|+|++++++++...+  ..+++++++ ++          ..+++..+..++.|++.||.|||+.+   ++|||
T Consensus        58 ~~~~l~~~~~i~~~~~~~~~~~--~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~D  131 (298)
T 1csn_A           58 TYKLLAGCTGIPNVYYFGQEGL--HNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRD  131 (298)
T ss_dssp             HHHHTTTCTTCCCEEEEEEETT--EEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCC
T ss_pred             HHHHHhcCCCCCeEEeecCCCc--eeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCC
Confidence            99999 8999999999987665  688899998 43          24677788899999999999999998   99999


Q ss_pred             CCCCCeeecCCCC-----eEEeccccceecCCCCcc-----eeccCcccCccccccccccccccCccchhh-HHHHHHHH
Q 046907          195 LNPVNVLLDDDIE-----ARISGFGFARAIPDAHTH-----ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGL  263 (345)
Q Consensus       195 lk~~nil~~~~~~-----~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el  263 (345)
                      |||+||+++.++.     +||+|||++.........     .......||+.|+|||.+.+..++.++||| +|+++|||
T Consensus       132 lkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el  211 (298)
T 1csn_A          132 IKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYF  211 (298)
T ss_dssp             CCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHH
Confidence            9999999987765     999999999877543221     123456799999999999998999999999 99999999


Q ss_pred             HhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 046907          264 VMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQI  343 (345)
Q Consensus       264 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l  343 (345)
                      ++|..||.......... ....+...........     ..    ......+.+++..||+.||++|||+.+|++.|+++
T Consensus       212 ~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~----~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~  281 (298)
T 1csn_A          212 LRGSLPWQGLKAATNKQ-KYERIGEKKQSTPLRE-----LC----AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  281 (298)
T ss_dssp             HHSSCTTSSCCSCCHHH-HHHHHHHHHHHSCHHH-----HT----TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HcCCCCcchhhccccHH-HHHHHHhhccCccHHH-----HH----hhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            99999986643322222 2222222221111100     00    11223577889999999999999999999999987


Q ss_pred             h
Q 046907          344 Q  344 (345)
Q Consensus       344 ~  344 (345)
                      .
T Consensus       282 ~  282 (298)
T 1csn_A          282 L  282 (298)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 102
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=2.9e-41  Score=300.79  Aligned_cols=256  Identities=18%  Similarity=0.242  Sum_probs=196.6

Q ss_pred             hhHHhhcCCccccc-ccccCcceeeEEEEec-CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 046907           41 LAFLEKKGGLASLE-KIGSGGCGEVYKAELP-GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMR  118 (345)
Q Consensus        41 ~~~~~~~~~~~~~~-~iG~G~~g~V~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (345)
                      .++..+.++|++.+ .||+|+||.||+|.+. ..++..||||.+.....+                         ....+
T Consensus         9 ~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~   63 (291)
T 1xbb_A            9 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-------------------------PALKD   63 (291)
T ss_dssp             --CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------------------------------CHHHH
T ss_pred             ceeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccC-------------------------HHHHH
Confidence            34455778999999 9999999999999653 345789999999643211                         22356


Q ss_pred             HHHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 046907          119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPR  189 (345)
Q Consensus       119 ~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~  189 (345)
                      .+.+|+.+++.++||||+++++++..+   ..+++++++.++++         ++......++.|++.||.|||+.+   
T Consensus        64 ~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---  137 (291)
T 1xbb_A           64 ELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---  137 (291)
T ss_dssp             HHHHHHHHHHTCCCTTBCCEEEEEESS---SEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHHHHHHHHhCCCCCEEEEEEEECCC---CcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            788999999999999999999998433   47889999987543         667778899999999999999998   


Q ss_pred             eEecCCCCCCeeecCCCCeEEeccccceecCCCCcce-eccCcccCccccccccccccccCccchhh-HHHHHHHHHh-C
Q 046907          190 IIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHI-TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-G  266 (345)
Q Consensus       190 iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g  266 (345)
                      ++|+||||+||+++.++.+||+|||++.......... ......++..|+|||.+.+..++.++||| +|+++|+|++ |
T Consensus       138 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g  217 (291)
T 1xbb_A          138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG  217 (291)
T ss_dssp             EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999998765433221 22234567889999999988899999999 9999999999 9


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ..||...    ........+.......             .+......+.+++..||+.||++|||+.++++.|+++.
T Consensus       218 ~~p~~~~----~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  278 (291)
T 1xbb_A          218 QKPYRGM----KGSEVTAMLEKGERMG-------------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  278 (291)
T ss_dssp             CCSSTTC----CHHHHHHHHHTTCCCC-------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CCCCCCC----CHHHHHHHHHcCCCCC-------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9996542    3333333333221111             11122335788999999999999999999999999874


No 103
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=6.3e-41  Score=310.02  Aligned_cols=242  Identities=19%  Similarity=0.244  Sum_probs=192.1

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++++.||+|+||.||+|+.+ .+|+.||+|.+.....                           .....+.+|+.+
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~---------------------------~~~~~~~~E~~i  101 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEK-ATGRVFVAKFINTPYP---------------------------LDKYTVKNEISI  101 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCSH---------------------------HHHHHHHHHHHH
T ss_pred             ccceEEEEEEecCCCEEEEEEEEC-CCCCEEEEEEecccch---------------------------hhHHHHHHHHHH
Confidence            468999999999999999999864 5799999999865421                           123467789999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      ++.++||||+++++++..++  .+++++|++.+++          .+++..+..++.|++.||.|||+.+   ++|||||
T Consensus       102 l~~l~hpnIv~~~~~~~~~~--~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlk  176 (387)
T 1kob_A          102 MNQLHHPKLINLHDAFEDKY--EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIK  176 (387)
T ss_dssp             HTTCCSTTBCCEEEEEECSS--EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCC
T ss_pred             HHhCCCcCCCeEEEEEEeCC--EEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccc
Confidence            99999999999999998765  7899999998754          3677788899999999999999998   9999999


Q ss_pred             CCCeeecC--CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          197 PVNVLLDD--DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       197 ~~nil~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      |+|||++.  .+.+||+|||++........   .....||+.|+|||++.+..++.++||| +|+++|+|++|..||.. 
T Consensus       177 p~NIll~~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~-  252 (387)
T 1kob_A          177 PENIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG-  252 (387)
T ss_dssp             GGGEEESSTTCCCEEECCCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC-
T ss_pred             hHHeEEecCCCCceEEEecccceecCCCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCC-
Confidence            99999974  56899999999987654332   2235789999999999998999999999 99999999999999643 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         .+.......+.......      +.    .........+.+++..||+.||++|||+.++++
T Consensus       253 ---~~~~~~~~~i~~~~~~~------~~----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          253 ---EDDLETLQNVKRCDWEF------DE----DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             ---SSHHHHHHHHHHCCCCC------CS----STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ---CCHHHHHHHHHhCCCCC------Cc----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence               23333333332221110      00    111122335788999999999999999999986


No 104
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.3e-41  Score=304.05  Aligned_cols=257  Identities=22%  Similarity=0.354  Sum_probs=190.4

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++.+.||+|+||.||+|++   +++.||||.+....                              ...+..|..
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~------------------------------~~~~~~e~~   81 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKW---RGEKVAVKVFFTTE------------------------------EASWFRETE   81 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEE---TTEEEEEEEEEGGG------------------------------HHHHHHHHH
T ss_pred             cccceEEEeEeecCCCeEEEEEEE---CCceEEEEEEeccc------------------------------cchhhhHHH
Confidence            346899999999999999999986   48899999985321                              122334445


Q ss_pred             HHhh--ccCCCccceeEEEecCCc--ceeeeeccccCCCCC--------CCHHHHHHHHHHHHHHHHHHhhc--------
Q 046907          126 TVGQ--IRHRNLHPLLAHVTRPDC--HLLYILNDVSQGRRE--------LDWLARHRIALGLACGLEYLHMH--------  185 (345)
Q Consensus       126 ~l~~--l~hpniv~l~~~~~~~~~--~~l~~~~~~~~~~~~--------l~~~~~~~i~~~i~~~l~~lh~~--------  185 (345)
                      ++..  ++||||+++++++.....  ..++++++++.++++        +++.....++.|++.||.|||+.        
T Consensus        82 ~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~  161 (337)
T 3mdy_A           82 IYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP  161 (337)
T ss_dssp             HHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC
T ss_pred             HHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Confidence            5444  599999999999887643  478999999998765        56667788999999999999998        


Q ss_pred             CCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcc--eeccCcccCccccccccccccccCcc------chhh-H
Q 046907          186 HCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTH--ITTSNVVGTVEYIAPEYLQMLTLTEK------CDIY-F  256 (345)
Q Consensus       186 ~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~gt~~~~aPE~~~~~~~~~~------~Dvw-l  256 (345)
                      +   ++||||||+||+++.++.+||+|||++.........  .......||+.|+|||.+.+...+..      +||| +
T Consensus       162 ~---ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diwsl  238 (337)
T 3mdy_A          162 A---IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSF  238 (337)
T ss_dssp             C---EECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHH
T ss_pred             C---EEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHH
Confidence            7   999999999999999999999999999766443221  12235689999999999987766554      9999 9


Q ss_pred             HHHHHHHHhC----------CCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCC
Q 046907          257 GALLAGLVMG----------KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLED  326 (345)
Q Consensus       257 G~vl~el~tg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~d  326 (345)
                      |+++|||++|          ..||.............   .............+...   ...++...+.+++.+||+.|
T Consensus       239 G~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~d  312 (337)
T 3mdy_A          239 GLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDM---REIVCIKKLRPSFPNRW---SSDECLRQMGKLMTECWAHN  312 (337)
T ss_dssp             HHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHH---HHHHTTSCCCCCCCGGG---GGSHHHHHHHHHHHHHSCSS
T ss_pred             HHHHHHHHhccCcccccccccccHhhhcCCCCchhhh---HHHHhhhccCccccccc---hhhHHHHHHHHHHHHhhhhC
Confidence            9999999999          66665443322222221   11111111111111111   12356677899999999999


Q ss_pred             CCCCCCHHHHHHHHhhhh
Q 046907          327 PNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       327 p~~Rpt~~~ll~~L~~l~  344 (345)
                      |.+|||+.++++.|+++.
T Consensus       313 P~~Rps~~ell~~L~~l~  330 (337)
T 3mdy_A          313 PASRLTALRVKKTLAKMS  330 (337)
T ss_dssp             GGGSCCHHHHHHHHHHHH
T ss_pred             hhhCCCHHHHHHHHHHHH
Confidence            999999999999999884


No 105
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=7.5e-41  Score=300.77  Aligned_cols=253  Identities=23%  Similarity=0.328  Sum_probs=186.2

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .+|..||+|.+.......                        ......+.+|+.
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~------------------------~~~~~~~~~E~~   84 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACL-LDGVPVALKKVQIFDLMD------------------------AKARADCIKEID   84 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEET-TTCCEEEEEEECTTSSCC------------------------HHHHHHHHHHHH
T ss_pred             cccceEEEEeecCCCCceEEEEEEc-CCCceEEEEeeehhhccC------------------------HHHHHHHHHHHH
Confidence            5568999999999999999999864 578999999996532211                        223567888999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------LDWLARHRIALGLACGLEYLHMHHCPRIIH  192 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH  192 (345)
                      +++.++||||+++++++..++  .++++++++.++++             ++......++.|++.||.|||+.+   ++|
T Consensus        85 ~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H  159 (310)
T 2wqm_A           85 LLKQLNHPNVIKYYASFIEDN--ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMH  159 (310)
T ss_dssp             HHHTCCCTTBCCEEEEEEETT--EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred             HHHhCCCCCEeeEEEEEEcCC--cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeC
Confidence            999999999999999998776  68899999987543             556667789999999999999998   999


Q ss_pred             cCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCc
Q 046907          193 RDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSD  271 (345)
Q Consensus       193 ~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~  271 (345)
                      +||||+||+++.++.++|+|||++........  ......|+..|+|||.+.+..++.++||| +|+++|+|++|..||.
T Consensus       160 ~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~  237 (310)
T 2wqm_A          160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY  237 (310)
T ss_dssp             CCCCGGGEEECTTSCEEECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             CCCcHHHEEEcCCCCEEEEeccceeeecCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence            99999999999999999999999876543221  22345789999999999998999999999 9999999999999975


Q ss_pred             ccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          272 KFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ...  .........+...   ..+.      ....   .....+.+++..||+.||++|||+.++++.|+++.
T Consensus       238 ~~~--~~~~~~~~~~~~~---~~~~------~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~  296 (310)
T 2wqm_A          238 GDK--MNLYSLCKKIEQC---DYPP------LPSD---HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH  296 (310)
T ss_dssp             -----CCHHHHHHHHHTT---CSCC------CCTT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccc--hhHHHHHHHhhcc---cCCC------Cccc---ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            321  1222222222211   1110      0001   11234778889999999999999999999999874


No 106
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=6.9e-41  Score=313.94  Aligned_cols=250  Identities=20%  Similarity=0.257  Sum_probs=192.2

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ....++|++++.||+|+||.||+|+++ .+++.||+|.+.....                        ........+.+|
T Consensus        70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~-~~~~~vAvK~~~~~~~------------------------~~~~~~~~~~~E  124 (437)
T 4aw2_A           70 RLHREDFEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEM------------------------LKRAETACFREE  124 (437)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEHHHH------------------------HHTTTTCCHHHH
T ss_pred             cCChhheEEEEEEEeCCCEEEEEEEEc-CCCcEEEEEEEEHHHh------------------------hhHHHHHHHHHH
Confidence            446789999999999999999999965 5789999999952100                        001123347789


Q ss_pred             HHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 046907          124 INTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRIIHR  193 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~  193 (345)
                      ..++..++||||+++++++..++  .+++++||+.++++          +++.....++.|++.||.|||+.+   ++||
T Consensus       125 ~~il~~~~hp~Iv~l~~~~~~~~--~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHr  199 (437)
T 4aw2_A          125 RDVLVNGDSKWITTLHYAFQDDN--NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHR  199 (437)
T ss_dssp             HHHHHHSCTTTBCCEEEEEECSS--EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECC
T ss_pred             HHHHHhCCCCCEEEEEEEEeeCC--EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC---eEec
Confidence            99999999999999999998776  78999999987643          566677889999999999999999   9999


Q ss_pred             CCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccc-----ccccCccchhh-HHHHHHHHHhCC
Q 046907          194 DLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ-----MLTLTEKCDIY-FGALLAGLVMGK  267 (345)
Q Consensus       194 dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~-----~~~~~~~~Dvw-lG~vl~el~tg~  267 (345)
                      ||||+|||++.++.+||+|||+++........ .....+||+.|+|||++.     ...++.++||| +|+++|||++|.
T Consensus       200 DLKp~NILl~~~g~vkL~DFGla~~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~  278 (437)
T 4aw2_A          200 DIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE  278 (437)
T ss_dssp             CCSGGGEEECTTSCEEECCCTTCEECCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSS
T ss_pred             ccCHHHeeEcCCCCEEEcchhhhhhcccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCC
Confidence            99999999999999999999999876543322 234468999999999997     45689999999 999999999999


Q ss_pred             CCCcccccccchhhHHHHHHHHh-hhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 046907          268 LPSDKFFQHTNEMSFVKWMRNVM-ASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNE--RPNSKDVRR  338 (345)
Q Consensus       268 ~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~--Rpt~~~ll~  338 (345)
                      .||..    .+..+....+.... ....+..          .......+.++|..||+.+|++  ||+++++++
T Consensus       279 ~Pf~~----~~~~~~~~~i~~~~~~~~~p~~----------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          279 TPFYA----ESLVETYGKIMNHKERFQFPTQ----------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             CTTCC----SSHHHHHHHHHTHHHHCCCCSS----------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             CCCCC----CChhHHHHhhhhccccccCCcc----------cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            99743    23333333332221 1111110          0111234678888899888888  999999875


No 107
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=6.3e-41  Score=306.16  Aligned_cols=240  Identities=26%  Similarity=0.387  Sum_probs=188.8

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .+.|+.++.||+|+||.||+|+.. .+|..||||.+.......                        ....+.+.+|+.+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vaiK~~~~~~~~~------------------------~~~~~~~~~E~~~  107 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSGKQS------------------------NEKWQDIIKEVRF  107 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEESCSSCH------------------------HHHHHHHHHHHHH
T ss_pred             hhheeeeeEEccCCCEEEEEEEEc-cCCeEEEEEEEccccccc------------------------hHHHHHHHHHHHH
Confidence            346999999999999999999853 579999999986543221                        2335678899999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR---------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++..++  ..+++++++.++         ..+++..+..++.|++.||.|||+.+   ++||||||
T Consensus       108 l~~l~hpniv~~~~~~~~~~--~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp  182 (348)
T 1u5q_A          108 LQKLRHPNTIQYRGCYLREH--TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKA  182 (348)
T ss_dssp             HHHCCCTTBCCEEEEEEETT--EEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSG
T ss_pred             HHhCCCCCEeeEEEEEEECC--eEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCH
Confidence            99999999999999998776  788999998752         34677788899999999999999998   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccc---ccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ---MLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~---~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      +||+++.++.+||+|||++......      ....||+.|+|||++.   +..++.++||| +|+++|||++|..||...
T Consensus       183 ~NIll~~~~~~kL~DfG~a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~  256 (348)
T 1u5q_A          183 GNILLSEPGLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM  256 (348)
T ss_dssp             GGEEEETTTEEEECCCTTCBSSSSB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             HHEEECCCCCEEEeeccCceecCCC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999999999765432      3467999999999985   45688999999 999999999999996432


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                          +.......+   .....+.      ......   ...+.+++..||+.||++|||+.++++
T Consensus       257 ----~~~~~~~~~---~~~~~~~------~~~~~~---~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          257 ----NAMSALYHI---AQNESPA------LQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             ----CHHHHHHHH---HHSCCCC------CCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ----ChHHHHHHH---HhcCCCC------CCCCCC---CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence                222222222   1111111      011111   234678888999999999999999875


No 108
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=3.2e-41  Score=313.84  Aligned_cols=249  Identities=19%  Similarity=0.270  Sum_probs=193.6

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ....++|++++.||+|+||.||+|+.+ .+++.||+|.+.....                        ........+.+|
T Consensus        65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~-~~~~~~AiK~~~k~~~------------------------~~~~~~~~~~~E  119 (410)
T 3v8s_A           65 RMKAEDYEVVKVIGRGAFGEVQLVRHK-STRKVYAMKLLSKFEM------------------------IKRSDSAFFWEE  119 (410)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHH------------------------HHTCCCSTHHHH
T ss_pred             ccCccccEEEEEEEcCCCEEEEEEEEC-CCCcEEEEEEEehhhh------------------------hhhHHHHHHHHH
Confidence            346789999999999999999999965 5799999999852100                        001123447789


Q ss_pred             HHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC--------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          124 INTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE--------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~--------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +.+++.++||||+++++++.+++  .+++++||+.++++        ++......++.|++.||.|||+.+   ++||||
T Consensus       120 ~~il~~l~hp~Iv~l~~~~~~~~--~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDL  194 (410)
T 3v8s_A          120 RDIMAFANSPWVVQLFYAFQDDR--YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG---FIHRDV  194 (410)
T ss_dssp             HHHHHHCCCTTBCCEEEEEECSS--EEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCC
T ss_pred             HHHHHhCCCCCCCeEEEEEEECC--EEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccC
Confidence            99999999999999999998766  79999999988765        556667789999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccc----cCccchhh-HHHHHHHHHhCCCCC
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT----LTEKCDIY-FGALLAGLVMGKLPS  270 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~----~~~~~Dvw-lG~vl~el~tg~~p~  270 (345)
                      ||+|||++.++.+||+|||+++....... ......+||+.|+|||++.+..    ++.++||| +|+++|||++|..||
T Consensus       195 Kp~NILl~~~g~ikL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf  273 (410)
T 3v8s_A          195 KPDNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF  273 (410)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CHHHeeECCCCCEEEeccceeEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCC
Confidence            99999999999999999999987654332 2334678999999999998765    78899999 999999999999996


Q ss_pred             cccccccchhhHHHHHHHHhhh-cCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 046907          271 DKFFQHTNEMSFVKWMRNVMAS-ENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNE--RPNSKDVRR  338 (345)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~--Rpt~~~ll~  338 (345)
                      ..    .+.......+...... ..+..           ......+.++|..||+.+|.+  ||++.+|++
T Consensus       274 ~~----~~~~~~~~~i~~~~~~~~~p~~-----------~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          274 YA----DSLVGTYSKIMNHKNSLTFPDD-----------NDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             CC----SSHHHHHHHHHTHHHHCCCCTT-----------CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             CC----CChhhHHHHHHhccccccCCCc-----------ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            43    2333333333322111 11110           011234778888999999988  999999975


No 109
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=6.6e-41  Score=296.96  Aligned_cols=251  Identities=18%  Similarity=0.257  Sum_probs=193.9

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCC--CCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQ--NGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      ....++|.+.+.||+|+||.||+|++...  ++..||+|.+.....                          ....+.+.
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~   61 (281)
T 3cc6_A            8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT--------------------------LDNKEKFM   61 (281)
T ss_dssp             SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC--------------------------HHHHHHHH
T ss_pred             eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC--------------------------chHHHHHH
Confidence            34678999999999999999999987533  345699999865321                          12356788


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +|+.+++.++||||+++++++..+.   .+++++++.++++          ++......++.|++.||.|||+.+   ++
T Consensus        62 ~E~~~l~~l~h~~i~~~~~~~~~~~---~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~  135 (281)
T 3cc6_A           62 SEAVIMKNLDHPHIVKLIGIIEEEP---TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CV  135 (281)
T ss_dssp             HHHHHHHHHCCTTBCCEEEEECSSS---CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             HHHHHHHhCCCCCcceEEEEEcCCC---CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            9999999999999999999886543   5788899887543          666777889999999999999998   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLP  269 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p  269 (345)
                      |+||||+||+++.++.+||+|||++......... ......++..|+|||.+.+..++.++||| +|+++|+|++ |..|
T Consensus       136 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p  214 (281)
T 3cc6_A          136 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP  214 (281)
T ss_dssp             CCCCSGGGEEEEETTEEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             cCCCccceEEECCCCcEEeCccCCCccccccccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999866443221 22335678899999999988899999999 9999999998 9999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      |...    ........+......+.+             ......+.+++..||+.||++|||+.++++.|+++.
T Consensus       215 ~~~~----~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  272 (281)
T 3cc6_A          215 FFWL----ENKDVIGVLEKGDRLPKP-------------DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY  272 (281)
T ss_dssp             TTTS----CGGGHHHHHHHTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccC----ChHHHHHHHhcCCCCCCC-------------CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence            7432    223333333322211111             111234778899999999999999999999999874


No 110
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=1.2e-40  Score=304.45  Aligned_cols=240  Identities=19%  Similarity=0.253  Sum_probs=191.5

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.+ .+|+.||+|.+.....                        ........+.+|+.
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~------------------------~~~~~~~~~~~E~~   93 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHK-ESGNHYAMKILDKQKV------------------------VKLKQIEHTLNEKR   93 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHH------------------------HHTTCHHHHHHHHH
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEEC-CCCCEEEEEEEEhHHh------------------------ccHHHHHHHHHHHH
Confidence            3468999999999999999999964 5799999999842110                        01123567888999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++..++  .++++++++.++++         ++......++.|++.||.|||+.+   ++|||||
T Consensus        94 ~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlk  168 (350)
T 1rdq_E           94 ILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLK  168 (350)
T ss_dssp             HHTTCCCTTBCCEEEEEECSS--EEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred             HHHhCCCCCCCeEEEEEEcCC--EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCc
Confidence            999999999999999998766  78999999988754         456667789999999999999999   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      |+|||++.++.+||+|||++......     .....||+.|+|||++.+..++.++||| +|+++|||++|..||..   
T Consensus       169 p~NIll~~~g~~kL~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~---  240 (350)
T 1rdq_E          169 PENLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA---  240 (350)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC---
T ss_pred             cceEEECCCCCEEEcccccceeccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC---
Confidence            99999999999999999999876432     2346899999999999998999999999 99999999999999643   


Q ss_pred             ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 046907          276 HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPN-----SKDVRR  338 (345)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt-----~~~ll~  338 (345)
                       .+.......+...   ...   +    +    ......+.+++..||+.||.+||+     +.+|++
T Consensus       241 -~~~~~~~~~i~~~---~~~---~----p----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          241 -DQPIQIYEKIVSG---KVR---F----P----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             -SSHHHHHHHHHHC---CCC---C----C----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             -CCHHHHHHHHHcC---CCC---C----C----CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence             2333333333221   110   0    0    111234778899999999999998     777764


No 111
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=4.2e-41  Score=306.67  Aligned_cols=243  Identities=23%  Similarity=0.346  Sum_probs=189.9

Q ss_pred             hhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      ...++|++.+.||+|+||.||+|+++ .+|+.||+|.+.....                        ........+..|.
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~~~~~~~------------------------~~~~~~~~~~~E~   68 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVV------------------------LMDDDVECTMVEK   68 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEEHHHH------------------------HHTTCHHHHHHHH
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhHHh------------------------hhhhhHHHHHHHH
Confidence            46689999999999999999999965 5799999999952110                        0012345677888


Q ss_pred             HHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          125 NTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       125 ~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      .++..+ +||||+++++++..++  .+++++||+.++++         +++.....++.|++.||.|||+.+   ++|||
T Consensus        69 ~il~~~~~hp~iv~l~~~~~~~~--~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrD  143 (345)
T 1xjd_A           69 RVLSLAWEHPFLTHMFCTFQTKE--NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRD  143 (345)
T ss_dssp             HHHHHHTTCTTBCCEEEEEECSS--EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCC
T ss_pred             HHHHhcCCCCCCCcEEEEEEeCC--EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCC
Confidence            999877 9999999999998776  78999999988755         556667789999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      |||+|||++.++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|+| +|+++|||++|..||.. 
T Consensus       144 lkp~NIll~~~g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-  220 (345)
T 1xjd_A          144 LKLDNILLDKDGHIKIADFGMCKENMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-  220 (345)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-
T ss_pred             CChhhEEECCCCCEEEeEChhhhhcccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC-
Confidence            999999999999999999999975432211  23457899999999999999999999999 99999999999999643 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSK-DVR  337 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~-~ll  337 (345)
                         .+.......+....    +.  ++     ..   ....+.+++..||+.||.+||++. +++
T Consensus       221 ---~~~~~~~~~i~~~~----~~--~p-----~~---~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          221 ---QDEEELFHSIRMDN----PF--YP-----RW---LEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             ---SSHHHHHHHHHHCC----CC--CC-----TT---SCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             ---CCHHHHHHHHHhCC----CC--CC-----cc---cCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence               23333333332211    10  00     11   123477888999999999999987 554


No 112
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=1.5e-40  Score=299.88  Aligned_cols=239  Identities=25%  Similarity=0.355  Sum_probs=189.7

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++++.||+|+||.||+|+.+ .+|+.||+|.+......                        ..+....+.+|..+
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~------------------------~~~~~~~~~~E~~~   59 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIVV------------------------RLKQVEHTNDERLM   59 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHH------------------------HTTCHHHHHHHHHH
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHhh------------------------hhhHHHHHHHHHHH
Confidence            468999999999999999999864 57999999998521100                        01235567789999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++.+.+  .+++++|++.++++         ++......++.|++.||.|||+.+   ++||||||
T Consensus        60 l~~l~hp~Iv~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp  134 (318)
T 1fot_A           60 LSIVTHPFIIRMWGTFQDAQ--QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKP  134 (318)
T ss_dssp             HHSCCBTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCG
T ss_pred             HhhCCCCCCceEeEEEEeCC--EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCh
Confidence            99999999999999998766  78999999988654         556667789999999999999998   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQH  276 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~  276 (345)
                      +|||++.++.+||+|||++......     .....||+.|+|||++.+..++.++|+| +|+++|||++|..||..    
T Consensus       135 ~NIll~~~g~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~----  205 (318)
T 1fot_A          135 ENILLDKNGHIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD----  205 (318)
T ss_dssp             GGEEECTTSCEEECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC----
T ss_pred             heEEEcCCCCEEEeecCcceecCCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC----
Confidence            9999999999999999999875432     2346899999999999999999999999 99999999999999743    


Q ss_pred             cchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 046907          277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERP-----NSKDVRR  338 (345)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rp-----t~~~ll~  338 (345)
                      .+.......+..   ....       .+    +.....+.+++..||+.||.+||     +++++++
T Consensus       206 ~~~~~~~~~i~~---~~~~-------~p----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          206 SNTMKTYEKILN---AELR-------FP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             SSHHHHHHHHHH---CCCC-------CC----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCHHHHHHHHHh---CCCC-------CC----CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            222222222221   1110       00    11123477888999999999999     8888874


No 113
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.5e-41  Score=297.97  Aligned_cols=252  Identities=18%  Similarity=0.292  Sum_probs=198.0

Q ss_pred             HhhcCCccccc-ccccCcceeeEEEEec-CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLE-KIGSGGCGEVYKAELP-GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        44 ~~~~~~~~~~~-~iG~G~~g~V~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      ....++|.+.+ .||+|+||.||+|+++ ..++..||+|.+.....                          ....+.+.
T Consensus         5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~   58 (287)
T 1u59_A            5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--------------------------KADTEEMM   58 (287)
T ss_dssp             BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC--------------------------HHHHHHHH
T ss_pred             cccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccc--------------------------hhHHHHHH
Confidence            44667888888 9999999999999864 23578899999975321                          22356788


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +|+.+++.++||||+++++++..+   .++++++++.++          ..+++..+..++.|++.||.|||+.+   ++
T Consensus        59 ~E~~~l~~l~h~~i~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~  132 (287)
T 1u59_A           59 REAQIMHQLDNPYIVRLIGVCQAE---ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FV  132 (287)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEESS---SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             HHHHHHHhCCCCCEeEEEEEecCC---CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC---Ee
Confidence            999999999999999999998543   478888988764          33677888999999999999999998   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCcc-eeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKL  268 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~  268 (345)
                      |+||||+||+++.++.++|+|||++......... .......||+.|+|||.+.+..++.++||| +|+++|+|++ |..
T Consensus       133 H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  212 (287)
T 1u59_A          133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK  212 (287)
T ss_dssp             CCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             eCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999877543321 122334668899999999988899999999 9999999998 999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ||...    ...+....+........             ++.....+.+++..||+.||++|||+.++++.|+++.
T Consensus       213 p~~~~----~~~~~~~~i~~~~~~~~-------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  271 (287)
T 1u59_A          213 PYKKM----KGPEVMAFIEQGKRMEC-------------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  271 (287)
T ss_dssp             TTTTC----CTHHHHHHHHTTCCCCC-------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CcccC----CHHHHHHHHhcCCcCCC-------------CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            97542    23333333332211111             1122335778999999999999999999999999874


No 114
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=6.7e-41  Score=303.42  Aligned_cols=248  Identities=21%  Similarity=0.261  Sum_probs=192.6

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.. .+|..||+|.+..........                     ....+.+.+|+.+
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~---------------------~~~~~~~~~E~~~   67 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREK-STGLQYAAKFIKKRRTKSSRR---------------------GVSREDIEREVSI   67 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEEEBCCSTTCSS---------------------SBCHHHHHHHHHH
T ss_pred             ccceEeceEEeeCCCeEEEEEEEC-CCCcEEEEEEEEccccccccc---------------------hhhHHHHHHHHHH
Confidence            357999999999999999999864 579999999987543321100                     0014567889999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++..++  .++++++++.++++         +++.....++.|++.||.|||+.+   ++||||||
T Consensus        68 l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp  142 (326)
T 2y0a_A           68 LKEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKP  142 (326)
T ss_dssp             HHHCCCTTBCCEEEEEECSS--EEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCG
T ss_pred             HHhCCCCCCCcEEEEEEeCC--EEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCH
Confidence            99999999999999998766  68899999987543         567778899999999999999998   99999999


Q ss_pred             CCeeecCCC----CeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcc
Q 046907          198 VNVLLDDDI----EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDK  272 (345)
Q Consensus       198 ~nil~~~~~----~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~  272 (345)
                      +||+++.++    .+||+|||++.......   ......||+.|+|||++.+..++.++||| +|+++|+|++|..||..
T Consensus       143 ~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  219 (326)
T 2y0a_A          143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  219 (326)
T ss_dssp             GGEEESCSSSSSCCEEECCCTTCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             HHEEEecCCCCCCCEEEEECCCCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence            999998877    79999999998764332   22346799999999999988999999999 99999999999999643


Q ss_pred             cccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          273 FFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                          .........+......  .    .....    +.....+.+++..||+.||++|||+.++++
T Consensus       220 ----~~~~~~~~~~~~~~~~--~----~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          220 ----DTKQETLANVSAVNYE--F----EDEYF----SNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             ----SSHHHHHHHHHHTCCC--C----CHHHH----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ----CCHHHHHHHHHhcCCC--c----Ccccc----ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                2223333322221100  0    00000    111234778899999999999999999986


No 115
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=4.2e-41  Score=302.25  Aligned_cols=240  Identities=23%  Similarity=0.395  Sum_probs=183.0

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      +.++|++.+.||+|+||.||+|++   .++.||+|.+...                             ...+.+.+|+.
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~-----------------------------~~~~~~~~E~~   53 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAKW---RAKDVAIKQIESE-----------------------------SERKAFIVELR   53 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEE---TTEEEEEEECSST-----------------------------THHHHHHHHHH
T ss_pred             CHhHeeeeeEeecCCCceEEEEEE---CCeeEEEEEecCh-----------------------------hHHHHHHHHHH
Confidence            567899999999999999999987   4788999998532                             12456788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC------------CCHHHHHHHHHHHHHHHHHHhh---cCCCCe
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE------------LDWLARHRIALGLACGLEYLHM---HHCPRI  190 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~------------l~~~~~~~i~~~i~~~l~~lh~---~~~~~i  190 (345)
                      ++++++||||+++++++...    .++++++++++++            ++......++.|+++||.|||+   .+   +
T Consensus        54 ~l~~l~hp~iv~~~~~~~~~----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~---i  126 (307)
T 2eva_A           54 QLSRVNHPNIVKLYGACLNP----VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA---L  126 (307)
T ss_dssp             HHHHCCCTTBCCEEEBCTTT----TEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC---C
T ss_pred             HHhcCCCCCcCeEEEEEcCC----cEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC---e
Confidence            99999999999999987632    6789999987654            4556678899999999999999   66   9


Q ss_pred             EecCCCCCCeeecCCCC-eEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCC
Q 046907          191 IHRDLNPVNVLLDDDIE-ARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKL  268 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~-~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~  268 (345)
                      +||||||+||+++.++. +||+|||++......     .....||+.|+|||.+.+..++.++||| +|+++|||++|..
T Consensus       127 vH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  201 (307)
T 2eva_A          127 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK  201 (307)
T ss_dssp             CCCCCSGGGEEEETTTTEEEECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCC
T ss_pred             ecCCCChhHEEEeCCCCEEEEcccccccccccc-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            99999999999998876 799999999755332     2235689999999999998999999999 9999999999999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ||.....  ........+   .....+.          ........+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       202 p~~~~~~--~~~~~~~~~---~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  262 (307)
T 2eva_A          202 PFDEIGG--PAFRIMWAV---HNGTRPP----------LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM  262 (307)
T ss_dssp             TTTTTCS--SHHHHHHHH---HTTCCCC----------CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred             CchhhCc--cHHHHHHHH---hcCCCCC----------cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            9754322  111111111   1111110          01112234778899999999999999999999998874


No 116
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=6e-41  Score=299.66  Aligned_cols=257  Identities=21%  Similarity=0.254  Sum_probs=194.7

Q ss_pred             hhHHhhcCCcccccccccCcceeeEEEEecCCC--CceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 046907           41 LAFLEKKGGLASLEKIGSGGCGEVYKAELPGQN--GRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMR  118 (345)
Q Consensus        41 ~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (345)
                      ..+-....+|++.+.||+|+||.||+|++...+  +..+|+|.+.....                          ....+
T Consensus        18 ~~i~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~--------------------------~~~~~   71 (298)
T 3f66_A           18 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--------------------------IGEVS   71 (298)
T ss_dssp             GBCCGGGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS--------------------------HHHHH
T ss_pred             eecCccceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC--------------------------HHHHH
Confidence            334456678999999999999999999864322  34689999864321                          22356


Q ss_pred             HHHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCC
Q 046907          119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCP  188 (345)
Q Consensus       119 ~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~  188 (345)
                      .+.+|+.++++++||||+++++++...+ ...+++++++.++++          ++......++.|++.||.|||+.+  
T Consensus        72 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~--  148 (298)
T 3f66_A           72 QFLTEGIIMKDFSHPNVLSLLGICLRSE-GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--  148 (298)
T ss_dssp             HHHHHHHHHHTCCCTTBCCCCEEECCSS-SCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHHHHHHHHHhCCCCCEeeeeeEEEcCC-CceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            7889999999999999999999876544 357788999987543          566777889999999999999999  


Q ss_pred             CeEecCCCCCCeeecCCCCeEEeccccceecCCCCc--ceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh
Q 046907          189 RIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHT--HITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM  265 (345)
Q Consensus       189 ~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t  265 (345)
                       ++||||||+||+++.++.+||+|||++........  ........||+.|+|||.+.+..++.++||| +|+++|+|++
T Consensus       149 -i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  227 (298)
T 3f66_A          149 -FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT  227 (298)
T ss_dssp             -CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             -ccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHh
Confidence             99999999999999999999999999986644321  1122345678899999999998999999999 9999999999


Q ss_pred             -CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          266 -GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       266 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                       |.+||..    ....+....+........+          ..   ....+.+++..||+.||++|||+.++++.|+++.
T Consensus       228 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~----------~~---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  290 (298)
T 3f66_A          228 RGAPPYPD----VNTFDITVYLLQGRRLLQP----------EY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  290 (298)
T ss_dssp             TSCCSSTT----SCTTTHHHHHHTTCCCCCC----------TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCcc----CCHHHHHHHHhcCCCCCCC----------cc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence             5556433    3333333333322211111          11   1234788899999999999999999999999874


No 117
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=6.5e-41  Score=301.53  Aligned_cols=237  Identities=17%  Similarity=0.267  Sum_probs=180.4

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++.++||+|+||.||+|++. .+|+.||||++.......                         ........|+..+
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~-------------------------~~~~~~~~e~~~~  110 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSK-EDGRLYAVKRSMSPFRGP-------------------------KDRARKLAEVGSH  110 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-TTSCEEEEEEESSSCCSH-------------------------HHHHHHHHHHHHH
T ss_pred             hheeeeheeccCCCeEEEEEEEC-CCCeEEEEEEecccccCh-------------------------HHHHHHHHHHHHH
Confidence            57999999999999999999864 579999999986543331                         1233445566665


Q ss_pred             hhc-cCCCccceeEEEecCCcceeeeeccccCCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          128 GQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGR---------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       128 ~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ..+ +||||+++++++...+  .++++++++.+.         ..+++..+..++.|++.||.|||+.+   ++||||||
T Consensus       111 ~~~~~h~~iv~l~~~~~~~~--~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp  185 (311)
T 3p1a_A          111 EKVGQHPCCVRLEQAWEEGG--ILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKP  185 (311)
T ss_dssp             HHHCCCTTBCCEEEEEEETT--EEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred             HHhcCCCcEEEEEEEEEeCC--EEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCH
Confidence            555 9999999999998776  788999999552         34788888999999999999999998   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQH  276 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~  276 (345)
                      +|||++.++.+||+|||++.......   ......||+.|+|||++.+ .++.++||| +|+++|||++|..|+..   .
T Consensus       186 ~NIll~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~---~  258 (311)
T 3p1a_A          186 ANIFLGPRGRCKLGDFGLLVELGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG---G  258 (311)
T ss_dssp             GGEEECGGGCEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS---H
T ss_pred             HHEEECCCCCEEEccceeeeecccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC---c
Confidence            99999999999999999998765432   2234579999999999987 789999999 99999999999766421   1


Q ss_pred             cchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         .. ...+   . .....    +...    ......+.+++..||+.||++|||+.++++
T Consensus       259 ---~~-~~~~---~-~~~~~----~~~~----~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          259 ---EG-WQQL---R-QGYLP----PEFT----AGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             ---HH-HHHH---T-TTCCC----HHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ---cH-HHHH---h-ccCCC----cccc----cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence               11 1111   1 11111    1111    112245788999999999999999999986


No 118
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=4e-41  Score=307.68  Aligned_cols=242  Identities=19%  Similarity=0.267  Sum_probs=177.0

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++.+.||+|+||.||+|++. .+++.||||.+...                             ...+.+.+|+.
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~vavK~~~~~-----------------------------~~~~~~~~E~~  100 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQK-GTQKPYALKVLKKT-----------------------------VDKKIVRTEIG  100 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEC---------------------------------------CH
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEEC-CCCcEEEEEEeccc-----------------------------hhHHHHHHHHH
Confidence            3467999999999999999999965 57889999999642                             12345678999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      ++++++||||+++++++..++  .++++++++.++++         +++.....++.|++.||.|||+.+   ++|||||
T Consensus       101 ~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dik  175 (349)
T 2w4o_A          101 VLLRLSHPNIIKLKEIFETPT--EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG---IVHRDLK  175 (349)
T ss_dssp             HHHHCCCTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCC
T ss_pred             HHHhCCCCCCcceeeeEecCC--eEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCC
Confidence            999999999999999998776  68899999987654         577788899999999999999998   9999999


Q ss_pred             CCCeeecC---CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcc
Q 046907          197 PVNVLLDD---DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDK  272 (345)
Q Consensus       197 ~~nil~~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~  272 (345)
                      |+||+++.   ++.+||+|||++.......   ......||+.|+|||.+.+..++.++||| +|+++|||++|..||..
T Consensus       176 p~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  252 (349)
T 2w4o_A          176 PENLLYATPAPDAPLKIADFGLSKIVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD  252 (349)
T ss_dssp             GGGEEESSSSTTCCEEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cccEEEecCCCCCCEEEccCccccccCccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence            99999975   8899999999998654322   22346789999999999998999999999 99999999999999743


Q ss_pred             cccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          273 FFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .   .........+...   ....       ...........+.+++.+||+.||++|||+.++++
T Consensus       253 ~---~~~~~~~~~i~~~---~~~~-------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          253 E---RGDQFMFRRILNC---EYYF-------ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             T---TCHHHHHHHHHTT---CCCC-------CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             C---cccHHHHHHHHhC---CCcc-------CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            2   2222222222211   1100       00111122345778999999999999999999986


No 119
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=2.3e-41  Score=303.95  Aligned_cols=260  Identities=19%  Similarity=0.244  Sum_probs=188.9

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .+++.||+|.+.........                      ......+.+|+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~----------------------~~~~~~~~~e~~   63 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDP-HSGHFVALKSVRVPNGGGGG----------------------GGLPISTVREVA   63 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECT-TTCCEEEEEEEEEECCCTTS----------------------SCCCHHHHHHHH
T ss_pred             cccceEEEEEEecCCCeEEEEEEEC-CCCcEEEEEEEecccccccc----------------------cccchhHHHHHH
Confidence            3579999999999999999999853 57999999998643211100                      000123345666


Q ss_pred             HHhhc---cCCCccceeEEEecCCc---ceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 046907          126 TVGQI---RHRNLHPLLAHVTRPDC---HLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHMHHCPR  189 (345)
Q Consensus       126 ~l~~l---~hpniv~l~~~~~~~~~---~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~  189 (345)
                      +++.+   +||||+++++++.....   ..++++++++.+.          ..+++..+..++.|++.||.|||+.+   
T Consensus        64 ~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---  140 (308)
T 3g33_A           64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---  140 (308)
T ss_dssp             HHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            66555   59999999999876542   3578899988752          12788888999999999999999999   


Q ss_pred             eEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCC
Q 046907          190 IIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKL  268 (345)
Q Consensus       190 iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~  268 (345)
                      ++||||||+||+++.++.+||+|||++.......   ......||+.|+|||.+.+..++.++||| +|+++|+|++|..
T Consensus       141 ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~  217 (308)
T 3g33_A          141 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP  217 (308)
T ss_dssp             CCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSC
T ss_pred             cccCCCCHHHEEEcCCCCEEEeeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999997654332   22446889999999999998999999999 9999999999999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCcccc------cccc-------CCCcHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAID------SKLV-------GNGCEEQMLLVLKIACFCTLEDPNERPNSKD  335 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~  335 (345)
                      ||..    .........+......+.......      ....       ....++....+.+++.+||+.||++|||+.+
T Consensus       218 pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  293 (308)
T 3g33_A          218 LFCG----NSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFR  293 (308)
T ss_dssp             SCCC----SSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CCCC----CCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHH
Confidence            9643    333444444443332221111000      0000       0001122345778999999999999999999


Q ss_pred             HHH
Q 046907          336 VRR  338 (345)
Q Consensus       336 ll~  338 (345)
                      +++
T Consensus       294 ~l~  296 (308)
T 3g33_A          294 ALQ  296 (308)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            975


No 120
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=1.9e-41  Score=299.96  Aligned_cols=247  Identities=24%  Similarity=0.363  Sum_probs=189.0

Q ss_pred             hhhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           40 DLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQ  119 (345)
Q Consensus        40 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (345)
                      ...|..+.++|++.+.||+|+||.||+|++   +|..||+|.+....                             ..+.
T Consensus        13 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~-----------------------------~~~~   60 (278)
T 1byg_A           13 RSGWALNMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDA-----------------------------TAQA   60 (278)
T ss_dssp             --CCBCCGGGEEEEEEEEECSSCEEEEEEE---TTEEEEEEECCCCC-------------------------------HH
T ss_pred             hccccCChhhceEEeEEecCCCceEEEEEE---cCCEEEEEEecchh-----------------------------HHHH
Confidence            334556788999999999999999999986   58899999986431                             2456


Q ss_pred             HHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCC
Q 046907          120 IQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCP  188 (345)
Q Consensus       120 ~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~  188 (345)
                      +.+|+.+++.++||||+++++++..++ ..+++++++++++++           +++.....++.|++.||.|||+.+  
T Consensus        61 ~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--  137 (278)
T 1byg_A           61 FLAEASVMTQLRHSNLVQLLGVIVEEK-GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--  137 (278)
T ss_dssp             HHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEEcCC-CceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            788999999999999999999876543 367899999988654           455566789999999999999998  


Q ss_pred             CeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-C
Q 046907          189 RIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-G  266 (345)
Q Consensus       189 ~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g  266 (345)
                       ++|+||||+||+++.++.++|+|||++.......     ....++..|+|||.+.+..++.++||| +|+++|+|++ |
T Consensus       138 -i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g  211 (278)
T 1byg_A          138 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG  211 (278)
T ss_dssp             -CCCSCCSGGGEEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             -ccccCCCcceEEEeCCCcEEEeeccccccccccc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCC
Confidence             9999999999999999999999999987554321     234678899999999988899999999 9999999998 9


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ..||...    ...+....+.......             ........+.+++..||+.||++|||+.++++.|++++
T Consensus       212 ~~p~~~~----~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~  272 (278)
T 1byg_A          212 RVPYPRI----PLKDVVPRVEKGYKMD-------------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  272 (278)
T ss_dssp             CCSCTTS----CGGGHHHHHTTTCCCC-------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCC----CHHHHHHHHhcCCCCC-------------CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence            9997542    2233333222111110             11112234778889999999999999999999999885


No 121
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=1.2e-40  Score=308.91  Aligned_cols=244  Identities=20%  Similarity=0.355  Sum_probs=181.8

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ...+|++++.||+|+||.||+|...  ++..||||.+.....+                         ......+.+|+.
T Consensus        54 ~~~~y~~~~~LG~G~fg~Vy~~~~~--~~~~vaiK~~~~~~~~-------------------------~~~~~~~~~Ei~  106 (390)
T 2zmd_A           54 KGRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEAD-------------------------NQTLDSYRNEIA  106 (390)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECT--TCCEEEEEEEECTTCC-------------------------HHHHHHHHHHHH
T ss_pred             cCCceEEEEEEccCCCeEEEEEEcC--CCCEEEEEEEeccccc-------------------------HHHHHHHHHHHH
Confidence            3456999999999999999999864  5899999999654322                         233567889999


Q ss_pred             HHhhcc--CCCccceeEEEecCCcceeeeeccccCCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          126 TVGQIR--HRNLHPLLAHVTRPDCHLLYILNDVSQGR---------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       126 ~l~~l~--hpniv~l~~~~~~~~~~~l~~~~~~~~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      +++.++  ||||+++++++..++  .+++++++ .++         ..+++..+..++.|++.||.|||+.+   |+|||
T Consensus       107 ~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~E~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrD  180 (390)
T 2zmd_A          107 YLNKLQQHSDKIIRLYDYEITDQ--YIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSD  180 (390)
T ss_dssp             HHHHHTTTCTTBCCEEEEEECSS--EEEEEEEC-CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCC
T ss_pred             HHHHcccCCCeEEEEEEEEecCC--EEEEEEec-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecC
Confidence            999996  599999999998776  58888884 343         23566678899999999999999998   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-----------cccCccchhh-HHHHHHH
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-----------LTLTEKCDIY-FGALLAG  262 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-----------~~~~~~~Dvw-lG~vl~e  262 (345)
                      |||+|||++ ++.+||+|||++................||+.|+|||++.+           ..++.++||| +|+++||
T Consensus       181 lkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~e  259 (390)
T 2zmd_A          181 LKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY  259 (390)
T ss_dssp             CCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHH
T ss_pred             CCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHH
Confidence            999999996 57899999999987654333223345689999999999975           3588899999 9999999


Q ss_pred             HHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          263 LVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       263 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      |++|..||.....   ..   ..+........... .     +...   ...+.+++..||+.||.+|||+.++++
T Consensus       260 ll~G~~Pf~~~~~---~~---~~~~~~~~~~~~~~-~-----~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          260 MTYGKTPFQQIIN---QI---SKLHAIIDPNHEIE-F-----PDIP---EKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HHHSSCTTTTCCC---HH---HHHHHHHCTTSCCC-C-----CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHCCCcchhhhH---HH---HHHHHHhCccccCC-C-----Cccc---hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            9999999754221   11   11222221111100 0     0111   234778889999999999999999975


No 122
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.5e-40  Score=298.84  Aligned_cols=254  Identities=23%  Similarity=0.328  Sum_probs=187.8

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++++.||+|+||.||+|++. .+|+.||+|.+.....+                         ......+.+|+.++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~E~~~l   56 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNR-DTGQIVAIKKFLESEDD-------------------------PVIKKIALREIRML   56 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECCCCC--------------------------HHHHHHHHHHHHHH
T ss_pred             ccceEeeEEeecCCeEEEEEEeC-CCCcEEEEEEeeccccc-------------------------hHHHHHHHHHHHHH
Confidence            68999999999999999999964 57999999998654322                         22356678899999


Q ss_pred             hhccCCCccceeEEEecCCcceeeeeccccCCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 046907          128 GQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR---------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPV  198 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~  198 (345)
                      ++++||||+++++++..++  .+++++++++++         ..++......++.|++.||.|||+.+   ++||||||+
T Consensus        57 ~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~  131 (311)
T 4agu_A           57 KQLKHPNLVNLLEVFRRKR--RLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPE  131 (311)
T ss_dssp             HHCCCTTBCCEEEEEEETT--EEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGG
T ss_pred             HhCCCCCccchhheeecCC--eEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChh
Confidence            9999999999999998776  688899998864         33677788899999999999999999   999999999


Q ss_pred             CeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-cccCccchhh-HHHHHHHHHhCCCCCcccccc
Q 046907          199 NVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGALLAGLVMGKLPSDKFFQH  276 (345)
Q Consensus       199 nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~  276 (345)
                      ||+++.++.+||+|||++........  ......||..|+|||.+.+ ..++.++||| +|+++|+|++|..||...   
T Consensus       132 Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~---  206 (311)
T 4agu_A          132 NILITKHSVIKLCDFGFARLLTGPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGK---  206 (311)
T ss_dssp             GEEECTTSCEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCS---
T ss_pred             hEEEcCCCCEEEeeCCCchhccCccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC---
Confidence            99999999999999999987653322  2234678999999999976 5679999999 999999999999997542   


Q ss_pred             cchhhHHHHHHHHhhhcCCC--------------ccccccccCC---CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          277 TNEMSFVKWMRNVMASENPK--------------RAIDSKLVGN---GCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~---~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                       ...+....+........+.              ...++.....   ..+.....+.+++..||+.||++|||++++++
T Consensus       207 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          207 -SDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             -SHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             -CHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence             2333333333222111000              0000000000   00122345778999999999999999999985


No 123
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=8.2e-41  Score=302.78  Aligned_cols=260  Identities=19%  Similarity=0.300  Sum_probs=197.0

Q ss_pred             hcCCcccccccccCcceeeEEEEe---cCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAEL---PGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQS  122 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (345)
                      ..++|++++.||+|+||.||+|++   ...++..||||.+....                           ....+.+.+
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---------------------------~~~~~~~~~   91 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------------------EEHLRDFER   91 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC---------------------------SHHHHHHHH
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC---------------------------HHHHHHHHH
Confidence            456899999999999999999985   23578999999996532                           123567889


Q ss_pred             HHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 046907          123 EINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRIIH  192 (345)
Q Consensus       123 E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH  192 (345)
                      |+.+++.++||||+++++++...+...+++++++++++++          +++.....++.|++.||.|||+.+   ++|
T Consensus        92 E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH  168 (326)
T 2w1i_A           92 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIH  168 (326)
T ss_dssp             HHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT---EEC
T ss_pred             HHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---Eec
Confidence            9999999999999999999887765678899999987543          667777889999999999999998   999


Q ss_pred             cCCCCCCeeecCCCCeEEeccccceecCCCCcce-eccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCC
Q 046907          193 RDLNPVNVLLDDDIEARISGFGFARAIPDAHTHI-TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPS  270 (345)
Q Consensus       193 ~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~  270 (345)
                      +||||+||+++.++.+||+|||++.......... ......++..|+|||.+.+..++.++||| +|+++|+|++|..||
T Consensus       169 ~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~  248 (326)
T 2w1i_A          169 RDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS  248 (326)
T ss_dssp             SCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGG
T ss_pred             cCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999998765433221 12335677889999999988899999999 999999999999986


Q ss_pred             ccccc--------ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 046907          271 DKFFQ--------HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQ  342 (345)
Q Consensus       271 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~  342 (345)
                      .....        ..........+..........         ..+......+.++|..||+.||++|||+.++++.|++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~  319 (326)
T 2w1i_A          249 KSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  319 (326)
T ss_dssp             GSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCHHHHHHhhccccchhhhHHHHHHHhhcCCCC---------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            43210        000011111111111111000         0111223457889999999999999999999999998


Q ss_pred             hh
Q 046907          343 IQ  344 (345)
Q Consensus       343 l~  344 (345)
                      ++
T Consensus       320 l~  321 (326)
T 2w1i_A          320 IR  321 (326)
T ss_dssp             HH
T ss_pred             HH
Confidence            85


No 124
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=1.2e-40  Score=297.16  Aligned_cols=255  Identities=20%  Similarity=0.261  Sum_probs=193.1

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .+++.||||.+....                             ....+.+|+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~-----------------------------~~~~~~~e~~   56 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECVKT-----------------------------KHPQLHIESK   56 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEEC--------------------------------CCCHHHHHH
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEc-CCCceEEEEeecccc-----------------------------cchHHHHHHH
Confidence            4578999999999999999999854 579999999875421                             2334678999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCC---------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG---------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~---------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++|++++..+..+...+ ...+++++++.+         ...+++..+..++.|++.||.|||+.+   ++|||||
T Consensus        57 ~l~~l~~~~~i~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlk  132 (296)
T 4hgt_A           57 IYKMMQGGVGIPTIRWCGAEG-DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVK  132 (296)
T ss_dssp             HHHHHTTSTTCCCEEEEEEET-TEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCS
T ss_pred             HHHHhcCCCCCCeeeeecCCC-CceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCC
Confidence            999999998888877665443 367889999832         234677788899999999999999999   9999999


Q ss_pred             CCCeee---cCCCCeEEeccccceecCCCCcc-----eeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCC
Q 046907          197 PVNVLL---DDDIEARISGFGFARAIPDAHTH-----ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGK  267 (345)
Q Consensus       197 ~~nil~---~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~  267 (345)
                      |+||++   +.++.+||+|||++.........     .......||+.|+|||.+.+..++.++||| +|+++|+|++|.
T Consensus       133 p~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  212 (296)
T 4hgt_A          133 PDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS  212 (296)
T ss_dssp             GGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCC
Confidence            999999   78889999999999876543321     122356899999999999999999999999 999999999999


Q ss_pred             CCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          268 LPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       268 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      .||......................+.  ....        ......+.+++..||+.||++|||+.++++.|+++.
T Consensus       213 ~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~  279 (296)
T 4hgt_A          213 LPWQGLKAATKRQKYERISEKKMSTPI--EVLC--------KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             CTTSSCCCSSSSSHHHHHHHHHHHSCH--HHHT--------TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             CCCcccchhhhhhhhhhhhcccccchh--hhhh--------ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence            998764443333333332222221110  0000        011234788999999999999999999999999874


No 125
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-40  Score=297.76  Aligned_cols=253  Identities=25%  Similarity=0.317  Sum_probs=194.3

Q ss_pred             hcCCcccccccccCcceeeEEEEecC--CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPG--QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ..-.|.+.+.||+|+||.||+|++..  .++..||+|.+.....                          ....+.+.+|
T Consensus        19 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--------------------------~~~~~~~~~E   72 (298)
T 3pls_A           19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE--------------------------MQQVEAFLRE   72 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS--------------------------HHHHHHHHHH
T ss_pred             cceEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccccc--------------------------HHHHHHHHHH
Confidence            44467778999999999999998642  2344799999864321                          1235678899


Q ss_pred             HHHHhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 046907          124 INTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPRIIHR  193 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~  193 (345)
                      +.+++.++||||+++++++..++. ..+++++++.+++          .+++.....++.|++.||.|||+.+   ++||
T Consensus        73 ~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~  148 (298)
T 3pls_A           73 GLLMRGLNHPNVLALIGIMLPPEG-LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK---FVHR  148 (298)
T ss_dssp             HHHHHTCCCTTBCCCCEEECCSSS-CCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             HHHHHhCCCCCeeeEEEEEecCCC-CcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---cccC
Confidence            999999999999999999877653 3467778876654          3566677889999999999999999   9999


Q ss_pred             CCCCCCeeecCCCCeEEeccccceecCCCCc--ceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCC
Q 046907          194 DLNPVNVLLDDDIEARISGFGFARAIPDAHT--HITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPS  270 (345)
Q Consensus       194 dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~  270 (345)
                      ||||+||+++.++.+||+|||++........  ........+|..|+|||.+.+..++.++||| +|+++|+|++|..|+
T Consensus       149 dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~  228 (298)
T 3pls_A          149 DLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP  228 (298)
T ss_dssp             CCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred             CCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCC
Confidence            9999999999999999999999976543221  1122345778899999999999999999999 999999999965553


Q ss_pred             cccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          271 DKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                         +...........+........+             ......+.+++..||+.||.+|||+.++++.|+++.
T Consensus       229 ---~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~  286 (298)
T 3pls_A          229 ---YRHIDPFDLTHFLAQGRRLPQP-------------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV  286 (298)
T ss_dssp             ---TTTSCGGGHHHHHHTTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---CccCCHHHHHHHhhcCCCCCCC-------------ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence               3333444444444433221111             111234788999999999999999999999999874


No 126
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=1.9e-41  Score=326.46  Aligned_cols=251  Identities=23%  Similarity=0.357  Sum_probs=199.6

Q ss_pred             hhhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           40 DLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQ  119 (345)
Q Consensus        40 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (345)
                      .-.|....++|++.+.||+|+||.||+|+++  .+..||||.+......                            .+.
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~----------------------------~~~  308 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMS----------------------------PEA  308 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEET--TTEEEEEEEECTTSSC----------------------------HHH
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEEC--CCceEEEEEeCCCCCC----------------------------HHH
Confidence            3457788899999999999999999999985  4567999999754321                            345


Q ss_pred             HHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCC
Q 046907          120 IQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCP  188 (345)
Q Consensus       120 ~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~  188 (345)
                      +.+|+.++++++||||+++++++..+   .+++++|++.++++           +++.....++.|++.||.|||+.+  
T Consensus       309 ~~~E~~~l~~l~hpniv~~~~~~~~~---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--  383 (535)
T 2h8h_A          309 FLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--  383 (535)
T ss_dssp             HHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEeec---cceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            78899999999999999999988653   47899999988644           556667789999999999999998  


Q ss_pred             CeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-C
Q 046907          189 RIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-G  266 (345)
Q Consensus       189 ~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g  266 (345)
                       ++||||||+|||++.++.+||+|||+++....... .......++..|+|||.+.+..++.++||| ||+++|||++ |
T Consensus       384 -ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g  461 (535)
T 2h8h_A          384 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG  461 (535)
T ss_dssp             -CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTT
T ss_pred             -eeCCCCCHhhEEEcCCCcEEEcccccceecCCCce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence             99999999999999999999999999976543211 112234567899999999988999999999 9999999999 8


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ..||...    ...+....+......+.             ...+...+.++|..||+.||++|||+.+|++.|+.+.
T Consensus       462 ~~P~~~~----~~~~~~~~i~~~~~~~~-------------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          462 RVPYPGM----VNREVLDQVERGYRMPC-------------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             CCSSTTC----CHHHHHHHHHTTCCCCC-------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             CCCCCCC----CHHHHHHHHHcCCCCCC-------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            9996542    33334333332221111             1122345778999999999999999999999999873


No 127
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=2.2e-40  Score=311.22  Aligned_cols=264  Identities=22%  Similarity=0.254  Sum_probs=190.7

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++++.||+|+||.||+|++. .+++.||||.+.....+                         .....++.+|+.
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vAiK~~~~~~~~-------------------------~~~~~~~~~E~~   77 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDK-NTEKNVAIKKVNRMFED-------------------------LIDCKRILREIT   77 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEECSTTTS-------------------------HHHHHHHHHHHH
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEEC-CCCcEEEEEEeCchhcC-------------------------hHHHHHHHHHHH
Confidence            4679999999999999999999864 57999999999653322                         233567889999


Q ss_pred             HHhhccCCCccceeEEEecCCc---ceeeeeccccCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDC---HLLYILNDVSQG--------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~---~~l~~~~~~~~~--------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      +++.++||||+++++++...+.   ..++++++++++        ...++...+..++.|++.||.|||+.+   ++|||
T Consensus        78 ~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrD  154 (432)
T 3n9x_A           78 ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRD  154 (432)
T ss_dssp             HHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCC
T ss_pred             HHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCC
Confidence            9999999999999999876642   458899998875        234788888999999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcc--------------------eeccCcccCccccccccc-cccccCccch
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTH--------------------ITTSNVVGTVEYIAPEYL-QMLTLTEKCD  253 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~--------------------~~~~~~~gt~~~~aPE~~-~~~~~~~~~D  253 (345)
                      |||+|||++.++.+||+|||+++........                    ......+||+.|+|||++ .+..++.++|
T Consensus       155 lkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~D  234 (432)
T 3n9x_A          155 LKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSID  234 (432)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHH
T ss_pred             CCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccc
Confidence            9999999999999999999999876443211                    123567899999999986 5556899999


Q ss_pred             hh-HHHHHHHHHhCCCCCcc-------cccccc-----------------hhhHHHHHHHHhhhcCCCcc----------
Q 046907          254 IY-FGALLAGLVMGKLPSDK-------FFQHTN-----------------EMSFVKWMRNVMASENPKRA----------  298 (345)
Q Consensus       254 vw-lG~vl~el~tg~~p~~~-------~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~----------  298 (345)
                      || +||++|||++|..||..       .+...+                 ..+....+....+.+.....          
T Consensus       235 iwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~  314 (432)
T 3n9x_A          235 IWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIK  314 (432)
T ss_dssp             HHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHH
T ss_pred             cchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHH
Confidence            99 99999999986555431       111111                 12223333333322211000          


Q ss_pred             ----cccccc---CCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          299 ----IDSKLV---GNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       299 ----~~~~~~---~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                          ......   ....+.....+.+|+.+||+.||++|||+.++++
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  361 (432)
T 3n9x_A          315 YIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALD  361 (432)
T ss_dssp             HHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                000000   0000122345778999999999999999999986


No 128
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.3e-40  Score=294.25  Aligned_cols=242  Identities=21%  Similarity=0.335  Sum_probs=170.0

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .+|+.||+|.+.......                        ......+.+|+.
T Consensus        11 ~~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~------------------------~~~~~~~~~e~~   65 (275)
T 2eue_A           11 HIGNYQIVKTLGEGSFAKVKLAYHT-TTGQKVALKIINKKVLAK------------------------SDMQGRIEREIS   65 (275)
T ss_dssp             BCCCBCCCC---------EEEEECT-TTCCEEEEEEECSCC-----------------------------CHHHHHHHHH
T ss_pred             cccceEEEEEEEcCCCEEEEEEEEC-CCCCEEEEEEEEhhhcch------------------------HHHHHHHHHHHH
Confidence            3468999999999999999999854 579999999996543221                        122456788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG--------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~--------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +++.++||||+++++++...+  ..+++++++.+        ...+++.....++.|++.||.|||+.+   ++||||||
T Consensus        66 ~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp  140 (275)
T 2eue_A           66 YLRLLRHPHIIKLYDVIKSKD--EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKP  140 (275)
T ss_dssp             HHHHCCCTTBCCEEEEEECSS--CEEEEEECCCEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSG
T ss_pred             HHHhCCCCCeEEEEEEEecCC--eEEEEehhcCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCCh
Confidence            999999999999999998766  67888888854        234778888999999999999999999   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc-Cccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL-TEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~-~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      +||+++.++.+||+|||++........   .....||+.|+|||.+.+..+ +.++||| +|+++|+|++|..||..   
T Consensus       141 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~---  214 (275)
T 2eue_A          141 ENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD---  214 (275)
T ss_dssp             GGEEECTTSCEEECCSSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC---
T ss_pred             HhEEECCCCCEEEeecccceeccCccc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC---
Confidence            999999999999999999976544322   234578999999999988775 6899999 99999999999999753   


Q ss_pred             ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          276 HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                       .........+.....  ...            ......+.+++.+||+.||.+|||+.++++
T Consensus       215 -~~~~~~~~~~~~~~~--~~~------------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  262 (275)
T 2eue_A          215 -ESIPVLFKNISNGVY--TLP------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             -SSHHHHHHHHHHTCC--CCC------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -CCHHHHHHHHHhCCC--CCC------------ccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence             222233222222111  000            111234778899999999999999999975


No 129
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=6.9e-41  Score=303.36  Aligned_cols=252  Identities=23%  Similarity=0.345  Sum_probs=191.0

Q ss_pred             hhcCCcccccccccCcceeeEEEEec----CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELP----GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQI  120 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (345)
                      ...++|++.+.||+|+||.||+|++.    ..++..||||.+.....                          ......+
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~   80 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS--------------------------EQDELDF   80 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCC--------------------------HHHHHHH
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc--------------------------hhhHHHH
Confidence            35679999999999999999999853    24578999999964321                          1224567


Q ss_pred             HHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------------CCHHHHHHHHHHHHHHHHHHhh
Q 046907          121 QSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------------LDWLARHRIALGLACGLEYLHM  184 (345)
Q Consensus       121 ~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------------l~~~~~~~i~~~i~~~l~~lh~  184 (345)
                      .+|+.++++++||||+++++++..++  ..+++++++.++++                +++..+..++.|++.||.|||+
T Consensus        81 ~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~  158 (327)
T 2yfx_A           81 LMEALIISKFNHQNIVRCIGVSLQSL--PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE  158 (327)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhCCCCCCCeEEEEEcCCC--CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh
Confidence            88999999999999999999988766  56888999876433                5666778899999999999999


Q ss_pred             cCCCCeEecCCCCCCeeecC---CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHH
Q 046907          185 HHCPRIIHRDLNPVNVLLDD---DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL  260 (345)
Q Consensus       185 ~~~~~iiH~dlk~~nil~~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl  260 (345)
                      .+   ++||||||+||+++.   +..++|+|||++................||+.|+|||.+.+..++.++||| +|+++
T Consensus       159 ~~---i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  235 (327)
T 2yfx_A          159 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL  235 (327)
T ss_dssp             TT---CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             CC---eecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHH
Confidence            98   999999999999984   446999999999765443322233345778999999999988999999999 99999


Q ss_pred             HHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 046907          261 AGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRM  339 (345)
Q Consensus       261 ~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~  339 (345)
                      |+|++ |..||..    .........+........+             ......+.+++..||+.||.+|||+.++++.
T Consensus       236 ~ellt~g~~p~~~----~~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  298 (327)
T 2yfx_A          236 WEIFSLGYMPYPS----KSNQEVLEFVTSGGRMDPP-------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILER  298 (327)
T ss_dssp             HHHHTTSCCSSTT----CCHHHHHHHHHTTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCCCCCC----cCHHHHHHHHhcCCCCCCC-------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            99998 9999643    2333333333322111111             1122347789999999999999999999999


Q ss_pred             Hhhhh
Q 046907          340 LSQIQ  344 (345)
Q Consensus       340 L~~l~  344 (345)
                      |+.+.
T Consensus       299 l~~~~  303 (327)
T 2yfx_A          299 IEYCT  303 (327)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98763


No 130
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.9e-40  Score=301.28  Aligned_cols=252  Identities=22%  Similarity=0.365  Sum_probs=190.3

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCC---CceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQN---GRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQI  120 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (345)
                      ....++|.+.+.||+|+||.||+|+++..+   +..||||.+.....                          ......+
T Consensus        40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~   93 (333)
T 1mqb_A           40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT--------------------------EKQRVDF   93 (333)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC--------------------------HHHHHHH
T ss_pred             cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC--------------------------HHHHHHH
Confidence            446779999999999999999999875332   34699999964321                          1224568


Q ss_pred             HHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          121 QSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       121 ~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      .+|+.+++.++||||+++++++...+  .++++++++.+++          .+++..+..++.|++.||.|||+.+   +
T Consensus        94 ~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---i  168 (333)
T 1mqb_A           94 LGEAGIMGQFSHHNIIRLEGVISKYK--PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---Y  168 (333)
T ss_dssp             HHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT---C
T ss_pred             HHHHHHHHhCCCCCCCcEEEEEecCC--CcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            89999999999999999999987665  6889999998753          3667778899999999999999998   9


Q ss_pred             EecCCCCCCeeecCCCCeEEeccccceecCCCCc-ceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CC
Q 046907          191 IHRDLNPVNVLLDDDIEARISGFGFARAIPDAHT-HITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GK  267 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~  267 (345)
                      +||||||+||+++.++.+||+|||++........ ........+|..|+|||.+.+..++.++||| +|+++|||++ |.
T Consensus       169 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  248 (333)
T 1mqb_A          169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE  248 (333)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             eCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999987644321 1122234567889999999988999999999 9999999999 99


Q ss_pred             CCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 046907          268 LPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQI  343 (345)
Q Consensus       268 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l  343 (345)
                      .||...    ...+....+......+.             .......+.+++..||+.||++||++.++++.|+++
T Consensus       249 ~pf~~~----~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  307 (333)
T 1mqb_A          249 RPYWEL----SNHEVMKAINDGFRLPT-------------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  307 (333)
T ss_dssp             CTTTTC----CHHHHHHHHHTTCCCCC-------------CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCcccC----CHHHHHHHHHCCCcCCC-------------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            997432    22333333322211111             111223477889999999999999999999999886


No 131
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.8e-40  Score=305.33  Aligned_cols=255  Identities=23%  Similarity=0.327  Sum_probs=187.8

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.. .+|+.||||.+.....+                         .....++.+|+.
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~~E~~   76 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDG-RTGAKVAIKKLYRPFQS-------------------------ELFAKRAYRELR   76 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEET-TTCCEEEEEECSSTTSS-------------------------HHHHHHHHHHHH
T ss_pred             ecceEEEeEEeeecCCeEEEEEEEC-CCCCEEEEEEeCccccC-------------------------HHHHHHHHHHHH
Confidence            3578999999999999999999854 57999999998653222                         223567889999


Q ss_pred             HHhhccCCCccceeEEEecCCc----ceeeeeccccCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDC----HLLYILNDVSQG-------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~----~~l~~~~~~~~~-------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      +++.++||||+++++++..++.    ..++++++++.+       ...++......++.|++.||.|||+.+   ++|||
T Consensus        77 ~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~D  153 (367)
T 1cm8_A           77 LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRD  153 (367)
T ss_dssp             HHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCC
T ss_pred             HHHhCCCcCCCCceeeEecCCccccCceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccC
Confidence            9999999999999999876542    346889998832       123677778899999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-cccCccchhh-HHHHHHHHHhCCCCCcc
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGALLAGLVMGKLPSDK  272 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~vl~el~tg~~p~~~  272 (345)
                      |||+||+++.++.+||+|||+++.....     .....||+.|+|||.+.+ ..++.++||| +|+++|||++|..||.+
T Consensus       154 lkp~NIll~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  228 (367)
T 1cm8_A          154 LKPGNLAVNEDCELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG  228 (367)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCHHHEEEcCCCCEEEEeeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999999875432     234688999999999987 6789999999 99999999999999653


Q ss_pred             cccccchhhHHHHHHHHhhhcCCCc-----------------cccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 046907          273 FFQHTNEMSFVKWMRNVMASENPKR-----------------AIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKD  335 (345)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~  335 (345)
                          .+..+....+......+....                 ...........+.....+.+++.+||+.||.+|||+.+
T Consensus       229 ----~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e  304 (367)
T 1cm8_A          229 ----SDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGE  304 (367)
T ss_dssp             ----SSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             ----CCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHH
Confidence                233333333333222111000                 00000001111223345778999999999999999999


Q ss_pred             HHH
Q 046907          336 VRR  338 (345)
Q Consensus       336 ll~  338 (345)
                      +++
T Consensus       305 ~l~  307 (367)
T 1cm8_A          305 ALA  307 (367)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            987


No 132
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=3.2e-40  Score=302.84  Aligned_cols=248  Identities=21%  Similarity=0.322  Sum_probs=190.3

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++++.||+|+||.||+|++. .+++.||||.+...                            ......+..|+.
T Consensus        33 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~----------------------------~~~~~~~~~e~~   83 (360)
T 3llt_A           33 LNNAFLVIRKMGDGTFGRVLLCQHI-DNKKYYAVKVVRNI----------------------------KKYTRSAKIEAD   83 (360)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECSC----------------------------HHHHHHHHHHHH
T ss_pred             ecCEEEEEEEEcccCCeEEEEEEEC-CCCeEEEEEEeccc----------------------------hhhhhhhHHHHH
Confidence            4679999999999999999999964 57899999999642                            122445667888


Q ss_pred             HHhhcc-----CCCccceeEEEecCCcceeeeeccccCCCC-----------CCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 046907          126 TVGQIR-----HRNLHPLLAHVTRPDCHLLYILNDVSQGRR-----------ELDWLARHRIALGLACGLEYLHMHHCPR  189 (345)
Q Consensus       126 ~l~~l~-----hpniv~l~~~~~~~~~~~l~~~~~~~~~~~-----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~  189 (345)
                      +++.++     ||||+++++++...+  .++++++++ +++           .++...+..++.|++.||.|||+.+   
T Consensus        84 ~l~~l~~~~~~h~~iv~~~~~~~~~~--~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---  157 (360)
T 3llt_A           84 ILKKIQNDDINNNNIVKYHGKFMYYD--HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---  157 (360)
T ss_dssp             HHHHTCCCSTTGGGBCCEEEEEEETT--EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHHhcccCCCCCCeecccceeeECC--eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            988886     999999999998876  688999998 433           2677778899999999999999999   


Q ss_pred             eEecCCCCCCeeecC-------------------------CCCeEEeccccceecCCCCcceeccCcccCcccccccccc
Q 046907          190 IIHRDLNPVNVLLDD-------------------------DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ  244 (345)
Q Consensus       190 iiH~dlk~~nil~~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~  244 (345)
                      ++||||||+|||++.                         ++.+||+|||++......     .....||+.|+|||++.
T Consensus       158 ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~  232 (360)
T 3llt_A          158 LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVIL  232 (360)
T ss_dssp             EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHT
T ss_pred             eeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHc
Confidence            999999999999975                         788999999999865432     23467899999999999


Q ss_pred             ccccCccchhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccc-----------------cccccCC
Q 046907          245 MLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAI-----------------DSKLVGN  306 (345)
Q Consensus       245 ~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~  306 (345)
                      +..++.++||| +|+++|+|++|..||..    ....+....+........ ....                 .......
T Consensus       233 ~~~~~~~~DiwslG~il~ell~g~~pf~~----~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~p~~  307 (360)
T 3llt_A          233 NLGWDVSSDMWSFGCVLAELYTGSLLFRT----HEHMEHLAMMESIIQPIP-KNMLYEATKTNGSKYVNKDELKLAWPEN  307 (360)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCSCCC----SSHHHHHHHHHHHTCCCC-HHHHHHHTTSGGGGGEETTTTEECTTTT
T ss_pred             CCCCCCccchHHHHHHHHHHHHCCCCCCC----CcHHHHHHHHHHhcCCCC-HHHHhhhhhccCccccCcccceecCccc
Confidence            99999999999 99999999999999754    233344444433322111 0000                 0000000


Q ss_pred             Cc-HH---------------HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          307 GC-EE---------------QMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       307 ~~-~~---------------~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .. ..               ....+.+++..||+.||++|||+.++++
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          308 ASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             CSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            00 00               0145779999999999999999999875


No 133
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.2e-42  Score=311.11  Aligned_cols=255  Identities=24%  Similarity=0.361  Sum_probs=177.4

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|++   +|+.||||.+...                              ....+.+|..+
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~------------------------------~~~~~~~e~~~   48 (303)
T 3gxj_A            2 ARTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSR------------------------------EERSWFREAEI   48 (303)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-C---TTSCEEEEECC-T------------------------------THHHHHHHHHH
T ss_pred             cceeeehhhccCCCCeEEEEEEE---cCcceEEEEeccc------------------------------chhhHHHHHHH
Confidence            36899999999999999999986   5889999998532                              13345567777


Q ss_pred             Hhh--ccCCCccceeEEEecCCcc--eeeeeccccCCCCCCC--------HHHHHHHHHHHHHHHHHHh--------hcC
Q 046907          127 VGQ--IRHRNLHPLLAHVTRPDCH--LLYILNDVSQGRRELD--------WLARHRIALGLACGLEYLH--------MHH  186 (345)
Q Consensus       127 l~~--l~hpniv~l~~~~~~~~~~--~l~~~~~~~~~~~~l~--------~~~~~~i~~~i~~~l~~lh--------~~~  186 (345)
                      +..  ++||||+++++++..++..  .++++++++.++++.+        +.....++.|++.||.|||        +.+
T Consensus        49 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~  128 (303)
T 3gxj_A           49 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA  128 (303)
T ss_dssp             HTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-
T ss_pred             HHHHhccCcceeeeeeecccCCCccceeEEEEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Confidence            776  7999999999998876533  6789999999876643        4445689999999999999        777


Q ss_pred             CCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcce--eccCcccCcccccccccccc------ccCccchhh-HH
Q 046907          187 CPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHI--TTSNVVGTVEYIAPEYLQML------TLTEKCDIY-FG  257 (345)
Q Consensus       187 ~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~gt~~~~aPE~~~~~------~~~~~~Dvw-lG  257 (345)
                         ++||||||+||+++.++.+||+|||++..........  ......||+.|+|||.+.+.      .++.++||| +|
T Consensus       129 ---ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG  205 (303)
T 3gxj_A          129 ---IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG  205 (303)
T ss_dssp             ---CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-C
T ss_pred             ---EeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHH
Confidence               9999999999999999999999999997664433221  12345799999999999876      445789999 99


Q ss_pred             HHHHHHHhC----------CCCCcccccccchh-hHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCC
Q 046907          258 ALLAGLVMG----------KLPSDKFFQHTNEM-SFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLED  326 (345)
Q Consensus       258 ~vl~el~tg----------~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~d  326 (345)
                      +++|||++|          ..||.......... .....+    .........+.+.   ...++...+.+++.+||+.|
T Consensus       206 ~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~d  278 (303)
T 3gxj_A          206 LVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV----CEQKLRPNIPNRW---QSCEALRVMAKIMRECWYAN  278 (303)
T ss_dssp             CCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHH----TTSCCCCCCCGGG---GSSHHHHHHHHHHHTTCCSS
T ss_pred             HHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHH----HHhhcCCCccccc---cchhhHHHHHHHHHHHhccC
Confidence            999999999          66654332211111 111111    1111111111111   11256677999999999999


Q ss_pred             CCCCCCHHHHHHHHhhhh
Q 046907          327 PNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       327 p~~Rpt~~~ll~~L~~l~  344 (345)
                      |++|||+.++++.|+++.
T Consensus       279 P~~Rps~~~i~~~L~~l~  296 (303)
T 3gxj_A          279 GAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             GGGSCCHHHHHHHHHC-C
T ss_pred             cccCCCHHHHHHHHHHhh
Confidence            999999999999999885


No 134
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=2.1e-40  Score=302.91  Aligned_cols=243  Identities=22%  Similarity=0.290  Sum_probs=189.8

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.+ .+|+.||+|.+.....                        ........+..|..
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~AiK~~~~~~~------------------------~~~~~~~~~~~E~~   72 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERK-GTDELYAVKILKKDVV------------------------IQDDDVECTMVEKR   72 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEET-TEEEEEEEEEEEHHHH------------------------HHTTCHHHHHHHHH
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHh------------------------hcchHHHHHHHHHH
Confidence            5679999999999999999999964 5789999999952110                        01123566778999


Q ss_pred             HHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      ++..+ +||||+++++++...+  .+++++|++.++++         +++.....++.|++.||.|||+.+   ++||||
T Consensus        73 ~l~~~~~hp~iv~l~~~~~~~~--~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDl  147 (353)
T 2i0e_A           73 VLALPGKPPFLTQLHSCFQTMD--RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDL  147 (353)
T ss_dssp             HHTCTTCCTTBCCEEEEEECSS--EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCC
T ss_pred             HHHhcCCCCEEeeEEEEEEcCC--EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccC
Confidence            99887 8999999999998776  78999999988754         556667789999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      ||+|||++.++.+||+|||++.......  ......+||+.|+|||++.+..++.++|+| +|+++|||++|..||..  
T Consensus       148 kp~NIll~~~g~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--  223 (353)
T 2i0e_A          148 KLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--  223 (353)
T ss_dssp             CGGGEEECTTSCEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC--
T ss_pred             CHHHEEEcCCCcEEEEeCCcccccccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC--
Confidence            9999999999999999999997543222  123457899999999999999999999999 99999999999999743  


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPN-----SKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt-----~~~ll~  338 (345)
                        .+.......+...   ...   ++        ......+.+++..||+.||.+||+     +.++++
T Consensus       224 --~~~~~~~~~i~~~---~~~---~p--------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          224 --EDEDELFQSIMEH---NVA---YP--------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             --SSHHHHHHHHHHC---CCC---CC--------TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             --CCHHHHHHHHHhC---CCC---CC--------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence              2333333333221   110   00        111234778889999999999995     466653


No 135
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=9.2e-41  Score=297.23  Aligned_cols=255  Identities=25%  Similarity=0.376  Sum_probs=188.5

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCc--eeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGR--MISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      ....++|++.+.||+|+||.||+|++...++.  .||+|.+.......                        ....+.+.
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------------------------~~~~~~~~   69 (291)
T 1u46_A           14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------------------------PEAMDDFI   69 (291)
T ss_dssp             ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------------------------------CHHHHHHH
T ss_pred             ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCC------------------------HHHHHHHH
Confidence            34667999999999999999999987544443  68999986432111                        23367788


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +|+.+++.++||||+++++++..++   .+++++++.++++          +++.....++.|++.||.|||+.+   ++
T Consensus        70 ~e~~~l~~l~h~~i~~~~~~~~~~~---~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~  143 (291)
T 1u46_A           70 REVNAMHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FI  143 (291)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSSS---CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             HHHHHHHhCCCCCcccEEEEEccCC---ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            9999999999999999999988765   6788899887643          566677789999999999999998   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCcc-eeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKL  268 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~  268 (345)
                      |+||||+||+++.++.+||+|||++......... .......+|..|+|||.+.+..++.++||| +|+++|+|++ |..
T Consensus       144 H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~  223 (291)
T 1u46_A          144 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE  223 (291)
T ss_dssp             CSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999876543322 122345678889999999988899999999 9999999999 999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ||...    ........+..   .....         .........+.+++..||+.||++|||+.++++.|++++
T Consensus       224 p~~~~----~~~~~~~~~~~---~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          224 PWIGL----NGSQILHKIDK---EGERL---------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             TTTTC----CHHHHHHHHHT---SCCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CcccC----CHHHHHHHHHc---cCCCC---------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            97542    22233222221   11110         011122345788999999999999999999999999874


No 136
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=7.1e-41  Score=327.02  Aligned_cols=252  Identities=18%  Similarity=0.289  Sum_probs=193.3

Q ss_pred             HhhcCCccccc-ccccCcceeeEEEEecC-CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLE-KIGSGGCGEVYKAELPG-QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        44 ~~~~~~~~~~~-~iG~G~~g~V~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      ....+++.+.+ .||+|+||.||+|.++. .++..||||.++.....                          ...+.+.
T Consensus       331 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~--------------------------~~~~~~~  384 (613)
T 2ozo_A          331 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK--------------------------ADTEEMM  384 (613)
T ss_dssp             BCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSS--------------------------TTHHHHH
T ss_pred             eccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCCh--------------------------HHHHHHH
Confidence            44556666666 89999999999998753 24678999999754211                          1256788


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +|+.+++.++||||+++++++..+   .+++++|++.++++          +++..+..++.|++.||.|||+.+   ++
T Consensus       385 ~E~~il~~l~hpniv~l~~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ii  458 (613)
T 2ozo_A          385 REAQIMHQLDNPYIVRLIGVCQAE---ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FV  458 (613)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEESS---SEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             HHHHHHHhCCCCCEeeEEEEeccC---CeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EE
Confidence            999999999999999999998764   38899999988643          567778899999999999999998   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCcc-eeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKL  268 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~  268 (345)
                      ||||||+|||++.++.+||+|||+++........ .......+++.|+|||++.+..++.++||| ||+++|||++ |..
T Consensus       459 HrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~  538 (613)
T 2ozo_A          459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK  538 (613)
T ss_dssp             CSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            9999999999999999999999999866432211 112234557899999999988999999999 9999999998 999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ||...    ...+....+........+             ..+...+.++|..||+.||++|||+.+|++.|+.+.
T Consensus       539 Pf~~~----~~~~~~~~i~~~~~~~~p-------------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  597 (613)
T 2ozo_A          539 PYKKM----KGPEVMAFIEQGKRMECP-------------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  597 (613)
T ss_dssp             TTTTC----CSHHHHHHHHTTCCCCCC-------------TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CCCCC----CHHHHHHHHHcCCCCCCC-------------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            97543    333444444332211111             122345778999999999999999999999999863


No 137
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=4.5e-41  Score=302.54  Aligned_cols=254  Identities=20%  Similarity=0.272  Sum_probs=184.5

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.. .+++.||||.+.......                        ......+.+|+.+
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~------------------------~~~~~~~~~E~~~   65 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDL-RDHRDVAVKVLRADLARD------------------------PSFYLRFRREAQN   65 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECTTTTTS------------------------HHHHHHHHHHHTT
T ss_pred             cCcEEEEEEEccCCCEEEEEEEEC-CCCceEEEEEeCccccCC------------------------HHHHHHHHHHHHH
Confidence            468999999999999999999854 579999999997543221                        2235678899999


Q ss_pred             HhhccCCCccceeEEEecCCc--ceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDC--HLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~--~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      ++.++||||+++++++...+.  ...++++|+++++++         +++.....++.|++.||.|||+.+   ++||||
T Consensus        66 l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dl  142 (311)
T 3ork_A           66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDV  142 (311)
T ss_dssp             CCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCC
T ss_pred             HHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCC
Confidence            999999999999998876543  256899999987543         566777899999999999999998   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcc-eeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      ||+||+++.++.+||+|||++......... .......||+.|+|||.+.+..++.++||| +|+++|+|++|..||...
T Consensus       143 kp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~  222 (311)
T 3ork_A          143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD  222 (311)
T ss_dssp             CGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999999999866443221 223346789999999999998999999999 999999999999997532


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHH-HHHHhh
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV-RRMLSQ  342 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~l-l~~L~~  342 (345)
                          .......   ..........    ....   ......+.+++..||+.||++||++.++ ...+.+
T Consensus       223 ----~~~~~~~---~~~~~~~~~~----~~~~---~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          223 ----SPVSVAY---QHVREDPIPP----SARH---EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             ----SHHHHHH---HHHHCCCCCH----HHHS---TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ----ChHHHHH---HHhcCCCCCc----cccc---CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence                2222211   1111111100    0000   1122347788999999999999975554 444443


No 138
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=1.4e-40  Score=301.48  Aligned_cols=253  Identities=18%  Similarity=0.240  Sum_probs=193.6

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      +.++|++.+.||+|+||.||+|+.. .+++.||+|.+....                              ...+.+|+.
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~------------------------------~~~~~~E~~   82 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINI-TNNEKVVVKILKPVK------------------------------KKKIKREIK   82 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECSCC------------------------------HHHHHHHHH
T ss_pred             CCCceEEEEEecccCCeEEEEEEEC-CCCcEEEEEEecccc------------------------------hHHHHHHHH
Confidence            5678999999999999999999854 579999999996421                              345778999


Q ss_pred             HHhhcc-CCCccceeEEEecCCcceeeeeccccCCCCC------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 046907          126 TVGQIR-HRNLHPLLAHVTRPDCHLLYILNDVSQGRRE------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPV  198 (345)
Q Consensus       126 ~l~~l~-hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~  198 (345)
                      +++.++ ||||+++++++..+.....+++++++.++.+      ++......++.|++.||.|||+.+   ++||||||+
T Consensus        83 ~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~  159 (330)
T 3nsz_A           83 ILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPH  159 (330)
T ss_dssp             HHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGG
T ss_pred             HHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHH
Confidence            999996 9999999999998766688999999988653      667778899999999999999999   999999999


Q ss_pred             CeeecCCC-CeEEeccccceecCCCCcceeccCcccCccccccccccc-cccCccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          199 NVLLDDDI-EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       199 nil~~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      |||++.++ .+||+|||++........   .....||..|+|||.+.+ ..++.++||| +|+++|+|++|..||..   
T Consensus       160 Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~---  233 (330)
T 3nsz_A          160 NVMIDHEHRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH---  233 (330)
T ss_dssp             GEEEETTTTEEEECCCTTCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC---
T ss_pred             HEEEcCCCCEEEEEeCCCceEcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc---
Confidence            99999766 899999999987644322   234678999999999987 5689999999 99999999999999732   


Q ss_pred             ccchhhHHHHHHHHhhhcCC-----------------------CccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCC
Q 046907          276 HTNEMSFVKWMRNVMASENP-----------------------KRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPN  332 (345)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt  332 (345)
                      ..........+......+..                       ...................+.+++..||+.||.+|||
T Consensus       234 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  313 (330)
T 3nsz_A          234 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT  313 (330)
T ss_dssp             CSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCC
T ss_pred             CCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCC
Confidence            22222222222221111000                       0000000011111123456889999999999999999


Q ss_pred             HHHHHH
Q 046907          333 SKDVRR  338 (345)
Q Consensus       333 ~~~ll~  338 (345)
                      ++++++
T Consensus       314 a~e~l~  319 (330)
T 3nsz_A          314 AREAME  319 (330)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            999986


No 139
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=3.9e-41  Score=304.86  Aligned_cols=241  Identities=22%  Similarity=0.307  Sum_probs=166.6

Q ss_pred             ccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Q 046907           53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIR-  131 (345)
Q Consensus        53 ~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-  131 (345)
                      .+.||+|+||.||+|+++ .+++.||||.+...                              ....+.+|+.+++.+. 
T Consensus        16 ~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~------------------------------~~~~~~~e~~~l~~l~~   64 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHK-KSNQAFAVKIISKR------------------------------MEANTQKEITALKLCEG   64 (325)
T ss_dssp             SCCSEEETTEEEEEEEET-TTCCEEEEEEEEGG------------------------------GHHHHHHHHHHHHHTTT
T ss_pred             CCccccCCCeEEEEEEEC-CCCCEEEEEEEChh------------------------------hhhhHHHHHHHHHHhcC
Confidence            378999999999999864 57999999998521                              1344567999999996 


Q ss_pred             CCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeee
Q 046907          132 HRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLL  202 (345)
Q Consensus       132 hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~  202 (345)
                      ||||+++++++..++  .+++++|++.++++         +++..+..++.|++.||.|||+.+   ++||||||+||++
T Consensus        65 h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll  139 (325)
T 3kn6_A           65 HPNIVKLHEVFHDQL--HTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLF  139 (325)
T ss_dssp             CTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEE
T ss_pred             CCCeeEEEEEEEcCC--EEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEE
Confidence            999999999998766  78999999988654         567778899999999999999998   9999999999999


Q ss_pred             cCCC---CeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccccc
Q 046907          203 DDDI---EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTN  278 (345)
Q Consensus       203 ~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~  278 (345)
                      +.++   .+||+|||++........  ......||+.|+|||.+.+..++.++||| +|+++|+|++|..||........
T Consensus       140 ~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  217 (325)
T 3kn6_A          140 TDENDNLEIKIIDFGFARLKPPDNQ--PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT  217 (325)
T ss_dssp             EC----CEEEECCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------
T ss_pred             ecCCCcccEEEeccccceecCCCCC--cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc
Confidence            7655   799999999986543322  22346789999999999999999999999 99999999999999865433222


Q ss_pred             hhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          279 EMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .......+..........   .    ..........+.+++..||+.||.+|||+.++++
T Consensus       218 ~~~~~~~~~~i~~~~~~~---~----~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          218 CTSAVEIMKKIKKGDFSF---E----GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             CCCHHHHHHHHTTTCCCC---C----SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             cccHHHHHHHHHcCCCCC---C----cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            222233333332221110   0    0011122345788999999999999999998763


No 140
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.8e-41  Score=310.31  Aligned_cols=252  Identities=21%  Similarity=0.262  Sum_probs=184.0

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCC--CceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQN--GRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ....|++.+.||+|+||.||+|++...+  +..||+|.+.....                          ....+.+.+|
T Consensus        87 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~~E  140 (373)
T 3c1x_A           87 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--------------------------IGEVSQFLTE  140 (373)
T ss_dssp             TTEEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC--------------------------SHHHHHHHHH
T ss_pred             hhceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC--------------------------HHHHHHHHHH
Confidence            3446788899999999999999875333  35689999864221                          1235678899


Q ss_pred             HHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 046907          124 INTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRIIHR  193 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~  193 (345)
                      +.++++++||||+++++++...+ ...+++++++.++++          +++.....++.|++.||.|||+.+   ++||
T Consensus       141 ~~il~~l~hpnIv~~~~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHr  216 (373)
T 3c1x_A          141 GIIMKDFSHPNVLSLLGICLRSE-GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHR  216 (373)
T ss_dssp             HTTSTTCCCTTBCCCCEEECCCS-SCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             HHHHHhCCCCCcceEEEEEEcCC-CCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EecC
Confidence            99999999999999999876543 256789999987654          456667889999999999999998   9999


Q ss_pred             CCCCCCeeecCCCCeEEeccccceecCCCCcc--eeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCCC
Q 046907          194 DLNPVNVLLDDDIEARISGFGFARAIPDAHTH--ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLP  269 (345)
Q Consensus       194 dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p  269 (345)
                      ||||+||+++.++.+||+|||+++........  .......+|+.|+|||.+.+..++.++||| +|+++|||++ |.+|
T Consensus       217 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p  296 (373)
T 3c1x_A          217 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP  296 (373)
T ss_dssp             CCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCC
Confidence            99999999999999999999999865432211  122335678899999999998999999999 9999999999 6777


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      |...    ...+....+........+          .   .....+.++|..||+.||++|||+.++++.|+++.
T Consensus       297 ~~~~----~~~~~~~~~~~~~~~~~p----------~---~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          297 YPDV----NTFDITVYLLQGRRLLQP----------E---YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  354 (373)
T ss_dssp             CTTS----CSSCHHHHHHTTCCCCCC----------T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCC----CHHHHHHHHHcCCCCCCC----------C---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            6442    223333333222111111          1   12234778899999999999999999999999873


No 141
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=1.7e-40  Score=318.98  Aligned_cols=246  Identities=26%  Similarity=0.376  Sum_probs=194.4

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.+ .+|+.||+|.+.....                        ........+.+|+.
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~-~tg~~vAvK~l~k~~~------------------------~~~~~~~~~~~E~~  236 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVR-ATGKMYACKKLEKKRI------------------------KKRKGEAMALNEKQ  236 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHH------------------------HHTTCHHHHHHHHH
T ss_pred             cccceEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhHhh------------------------hhhHHHHHHHHHHH
Confidence            5578999999999999999999964 5799999999942110                        00122456788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      +++.++||||+++++++.+.+  .++++++|+.++++           +++..+..++.|++.||.|||+.+   |+|||
T Consensus       237 iL~~l~hp~Iv~l~~~~~~~~--~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrD  311 (576)
T 2acx_A          237 ILEKVNSRFVVSLAYAYETKD--ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRD  311 (576)
T ss_dssp             HHHHCCCTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCC
T ss_pred             HHHHcCCCCEeeEEEEEeeCC--EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccC
Confidence            999999999999999998776  79999999987654           677788899999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      |||+|||++.++.+||+|||++........   ....+||+.|+|||++.+..++.++||| +|+++|||++|..||...
T Consensus       312 LKPeNILld~~g~vKL~DFGla~~~~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~  388 (576)
T 2acx_A          312 LKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR  388 (576)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEECCTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred             CchheEEEeCCCCeEEEecccceecccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence            999999999999999999999987654322   2346899999999999998999999999 999999999999998653


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERP-----NSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rp-----t~~~ll~  338 (345)
                      ............+...   +..   +        +......+.+++..||+.||.+||     ++.+|++
T Consensus       389 ~~~~~~~~i~~~i~~~---~~~---~--------p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          389 KKKIKREEVERLVKEV---PEE---Y--------SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             SSCCCHHHHHHHHHHC---CCC---C--------CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             ccchhHHHHHHHhhcc---ccc---C--------CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            3322223333322211   110   0        011123477888999999999999     6788764


No 142
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=2.2e-40  Score=305.28  Aligned_cols=257  Identities=23%  Similarity=0.310  Sum_probs=186.6

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.. .+++.||||.+......                         ......+.+|+.
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~E~~   76 (371)
T 2xrw_A           23 VLKRYQNLKPIGSGAQGIVCAAYDA-ILERNVAIKKLSRPFQN-------------------------QTHAKRAYRELV   76 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEECTTSS-------------------------HHHHHHHHHHHH
T ss_pred             hhhheeEeeeeEecCCEEEEEEEEC-CCCceEEEEEeccccCC-------------------------hHHHHHHHHHHH
Confidence            3579999999999999999999854 57999999999653222                         223566788999


Q ss_pred             HHhhccCCCccceeEEEecCCc----ceeeeeccccCCC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDC----HLLYILNDVSQGR------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~----~~l~~~~~~~~~~------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++.++||||+++++++...+.    ..++++++++.++      ..++......++.|++.||.|||+.+   ++||||
T Consensus        77 ~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dl  153 (371)
T 2xrw_A           77 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDL  153 (371)
T ss_dssp             HHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred             HHHhcCCCCccceEEeeccccccccccceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCC---eecccC
Confidence            9999999999999999876542    3689999999763      23677778899999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      ||+||+++.++.+||+|||++.......   ......||+.|+|||++.+..++.++||| +|+++|+|++|..||... 
T Consensus       154 kp~NIl~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-  229 (371)
T 2xrw_A          154 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-  229 (371)
T ss_dssp             CGGGEEECTTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS-
T ss_pred             CHHHEEEcCCCCEEEEEeeccccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC-
Confidence            9999999999999999999997654322   22346789999999999998999999999 999999999999997542 


Q ss_pred             cccchhhHHHHHHHHhhhcCC------------------C--c-----cccccccCCC---cHHHHHHHHHHHhhccCCC
Q 046907          275 QHTNEMSFVKWMRNVMASENP------------------K--R-----AIDSKLVGNG---CEEQMLLVLKIACFCTLED  326 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~------------------~--~-----~~~~~~~~~~---~~~~~~~l~~li~~Cl~~d  326 (345)
                         +.......+......+.+                  .  .     .......+..   .......+.+++.+||+.|
T Consensus       230 ---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d  306 (371)
T 2xrw_A          230 ---DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID  306 (371)
T ss_dssp             ---SHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSS
T ss_pred             ---CHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCC
Confidence               222222222211111000                  0  0     0000000011   1223567899999999999


Q ss_pred             CCCCCCHHHHHH
Q 046907          327 PNERPNSKDVRR  338 (345)
Q Consensus       327 p~~Rpt~~~ll~  338 (345)
                      |++|||+.++++
T Consensus       307 P~~R~t~~e~l~  318 (371)
T 2xrw_A          307 ASKRISVDEALQ  318 (371)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCCCHHHHhC
Confidence            999999999986


No 143
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=5.2e-40  Score=302.81  Aligned_cols=236  Identities=21%  Similarity=0.273  Sum_probs=181.9

Q ss_pred             ccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 046907           53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIRH  132 (345)
Q Consensus        53 ~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h  132 (345)
                      .+.||+|+||.||+|+.. .+|..||+|.+.....                           ...+.+.+|+.++++++|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~-~~g~~vavK~~~~~~~---------------------------~~~~~~~~E~~~l~~l~h  145 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEET-ATGLKLAAKIIKTRGM---------------------------KDKEEVKNEISVMNQLDH  145 (373)
T ss_dssp             EEECC-----CEEEEEET-TTCCEEEEEEEECCSH---------------------------HHHHHHHHHHHHHTTCCC
T ss_pred             ceEEecCcCEEEEEEEEc-CCCcEEEEEEEccccc---------------------------ccHHHHHHHHHHHHhCCC
Confidence            568999999999999864 5799999999975321                           224567899999999999


Q ss_pred             CCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeee
Q 046907          133 RNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLL  202 (345)
Q Consensus       133 pniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~  202 (345)
                      |||+++++++...+  .+++++||++++++          +++.....++.|++.||.|||+.+   ++||||||+|||+
T Consensus       146 pnIv~~~~~~~~~~--~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll  220 (373)
T 2x4f_A          146 ANLIQLYDAFESKN--DIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILC  220 (373)
T ss_dssp             TTBCCEEEEEECSS--EEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEE
T ss_pred             CCCCeEEEEEEECC--EEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEE
Confidence            99999999998776  68999999988654          566677889999999999999999   9999999999999


Q ss_pred             --cCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccccch
Q 046907          203 --DDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNE  279 (345)
Q Consensus       203 --~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~  279 (345)
                        +.++.+||+|||++........   .....||+.|+|||++.+..++.++||| +|+++|||++|..||..    .+.
T Consensus       221 ~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~----~~~  293 (373)
T 2x4f_A          221 VNRDAKQIKIIDFGLARRYKPREK---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG----DND  293 (373)
T ss_dssp             EETTTTEEEECCCSSCEECCTTCB---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC----SSH
T ss_pred             ecCCCCcEEEEeCCCceecCCccc---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC----CCH
Confidence              5677899999999987654322   2345799999999999988899999999 99999999999999643    233


Q ss_pred             hhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          280 MSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ......+........      ..    ........+.+++.+||+.||.+|||+.++++
T Consensus       294 ~~~~~~i~~~~~~~~------~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          294 AETLNNILACRWDLE------DE----EFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHHHHHHHHTCCCSC------SG----GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHhccCCCC------hh----hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            333333322211100      00    01112235788999999999999999999986


No 144
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=2e-40  Score=300.37  Aligned_cols=245  Identities=20%  Similarity=0.285  Sum_probs=182.2

Q ss_pred             hcCCcccccccccCcceeeEEEEec--CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELP--GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ..++|++.+.||+|+||.||+|+..  ..+|+.||+|.+........                       ......+.+|
T Consensus        15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------~~~~~~~~~E   71 (327)
T 3a62_A           15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRN-----------------------AKDTAHTKAE   71 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC-------------------------------------H
T ss_pred             CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhh-----------------------hhHHHHHHHH
Confidence            5679999999999999999999863  24789999999975422110                       1235567789


Q ss_pred             HHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          124 INTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      +.+++.++||||+++++++..++  .++++++++.++.+         ++......++.|++.||.|||+.+   ++|||
T Consensus        72 ~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~D  146 (327)
T 3a62_A           72 RNILEEVKHPFIVDLIYAFQTGG--KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRD  146 (327)
T ss_dssp             HHHHHHCCCTTBCCEEEEEECSS--CEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCC
T ss_pred             HHHHHhCCCCCccceeEEEEcCC--EEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEccc
Confidence            99999999999999999998766  68999999988654         455667789999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      |||+||+++.++.+||+|||++........  ......||+.|+|||.+.+..++.++||| +|+++|+|++|..||...
T Consensus       147 lkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  224 (327)
T 3a62_A          147 LKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE  224 (327)
T ss_dssp             CCTTTEEECTTSCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CCHHHeEECCCCcEEEEeCCcccccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC
Confidence            999999999999999999999875432211  23446899999999999998899999999 999999999999997532


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERP-----NSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rp-----t~~~ll~  338 (345)
                          +.......+....   ..   .        ++.....+.+++.+||+.||.+||     ++.++++
T Consensus       225 ----~~~~~~~~i~~~~---~~---~--------p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          225 ----NRKKTIDKILKCK---LN---L--------PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             ----SHHHHHHHHHHTC---CC---C--------CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             ----CHHHHHHHHHhCC---CC---C--------CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence                2233322222211   10   0        011123477889999999999999     6777765


No 145
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.8e-40  Score=301.48  Aligned_cols=264  Identities=22%  Similarity=0.279  Sum_probs=188.4

Q ss_pred             hhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      .+.++|++.+.||+|+||.||+|++   +++.||||.+.....                            .......|+
T Consensus        10 ~~~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~----------------------------~~~~~e~~~   58 (336)
T 3g2f_A           10 LDLDNLKLLELIGRGRYGAVYKGSL---DERPVAVKVFSFANR----------------------------QNFINEKNI   58 (336)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEE---TTEEEEEEEEEGGGH----------------------------HHHHHHHHH
T ss_pred             cChHHhheeeecccCCCeEEEEEEE---CCeEEEEEEeeccch----------------------------hhHHHHHHH
Confidence            3678999999999999999999986   689999999853210                            011112344


Q ss_pred             HHHhhccCCCccceeEEEe---cCCcceeeeeccccCCCCC--------CCHHHHHHHHHHHHHHHHHHhhc--------
Q 046907          125 NTVGQIRHRNLHPLLAHVT---RPDCHLLYILNDVSQGRRE--------LDWLARHRIALGLACGLEYLHMH--------  185 (345)
Q Consensus       125 ~~l~~l~hpniv~l~~~~~---~~~~~~l~~~~~~~~~~~~--------l~~~~~~~i~~~i~~~l~~lh~~--------  185 (345)
                      ..+..++||||+++++.+.   ..+...+++++||++++++        .++.....++.|++.||.|||+.        
T Consensus        59 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~  138 (336)
T 3g2f_A           59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYK  138 (336)
T ss_dssp             HTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCB
T ss_pred             HHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccc
Confidence            4456689999999998553   3334467899999988765        35556778999999999999999        


Q ss_pred             -CCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCc------ceeccCcccCccccccccccc-------cccCcc
Q 046907          186 -HCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHT------HITTSNVVGTVEYIAPEYLQM-------LTLTEK  251 (345)
Q Consensus       186 -~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~------~~~~~~~~gt~~~~aPE~~~~-------~~~~~~  251 (345)
                       +   ++||||||+|||++.++.+||+|||++........      ........||+.|+|||++.+       ..++.+
T Consensus       139 ~~---ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  215 (336)
T 3g2f_A          139 PA---ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQ  215 (336)
T ss_dssp             CC---EECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHH
T ss_pred             cc---eeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccc
Confidence             8   99999999999999999999999999987654321      112234679999999999987       456789


Q ss_pred             chhh-HHHHHHHHHhCCCCCcccccccchh-h---------HHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHh
Q 046907          252 CDIY-FGALLAGLVMGKLPSDKFFQHTNEM-S---------FVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIAC  320 (345)
Q Consensus       252 ~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  320 (345)
                      +||| +|+++|||++|..||.......... .         ....+............++...  ...+.....+.++|.
T Consensus       216 ~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~  293 (336)
T 3g2f_A          216 VDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW--KENSLAVRSLKETIE  293 (336)
T ss_dssp             HHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC--CCCSHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccc--ccccchHHHHHHHHH
Confidence            9999 9999999999977743211111000 0         0011111111111111111111  122345667899999


Q ss_pred             hccCCCCCCCCCHHHHHHHHhhhh
Q 046907          321 FCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       321 ~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      +||+.||++|||+.++++.|+++.
T Consensus       294 ~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          294 DCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             HHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHhcCChhhCcchHHHHHHHHHHH
Confidence            999999999999999999999874


No 146
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=1.5e-40  Score=309.26  Aligned_cols=243  Identities=17%  Similarity=0.218  Sum_probs=180.5

Q ss_pred             cCCcccc-cccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASL-EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        47 ~~~~~~~-~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      .++|.+. +.||+|+||.||+|+.. .+|+.||||.+...                                ..+.+|+.
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~-~~~~~vAiK~~~~~--------------------------------~~~~~E~~  106 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNK-RTQEKFALKMLQDC--------------------------------PKARREVE  106 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECS--------------------------------HHHHHHHH
T ss_pred             cccceeccceeeeccCeEEEEEEEC-CCCCEEEEEEeCcc--------------------------------hhHHHHHH
Confidence            4567776 68999999999999854 67999999998531                                23456777


Q ss_pred             HHhh-ccCCCccceeEEEec--CCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          126 TVGQ-IRHRNLHPLLAHVTR--PDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       126 ~l~~-l~hpniv~l~~~~~~--~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      ++.+ .+||||+++++++..  .+...+++++||+.++++           +++..+..++.|++.||.|||+.+   ++
T Consensus       107 ~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iv  183 (400)
T 1nxk_A          107 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IA  183 (400)
T ss_dssp             HHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             HHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            7644 589999999998864  334578999999988543           677778899999999999999998   99


Q ss_pred             ecCCCCCCeeecC---CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCC
Q 046907          192 HRDLNPVNVLLDD---DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGK  267 (345)
Q Consensus       192 H~dlk~~nil~~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~  267 (345)
                      ||||||+|||++.   ++.+||+|||+++......   .....+||+.|+|||++.+..++.++||| +|+++|||++|.
T Consensus       184 HrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  260 (400)
T 1nxk_A          184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY  260 (400)
T ss_dssp             CCCCCGGGEEESSSSTTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSS
T ss_pred             ccCcCcceEEEecCCCCccEEEEecccccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCC
Confidence            9999999999997   7899999999998654322   22456889999999999998999999999 999999999999


Q ss_pred             CCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          268 LPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       268 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .||...............+...... .+         ..........+.++|..||+.||++|||+.++++
T Consensus       261 ~pf~~~~~~~~~~~~~~~i~~~~~~-~~---------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          261 PPFYSNHGLAISPGMKTRIRMGQYE-FP---------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             CSCCCCTTCSSCCSHHHHHHHTCCC-CC---------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCCCCCccccccHHHHHHHHcCccc-CC---------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            9986533322212222222221110 00         0011122345788999999999999999999986


No 147
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.2e-40  Score=308.46  Aligned_cols=249  Identities=19%  Similarity=0.235  Sum_probs=190.2

Q ss_pred             hhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      ...++|++++.||+|+||.||+|+.+ .+|+.||+|.+....                        .........+.+|.
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~-~~~~~vAiK~l~k~~------------------------~~~~~~~~~~~~E~  112 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMK-QTGQVYAMKIMNKWD------------------------MLKRGEVSCFREER  112 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHH------------------------HHHHGGGCCHHHHH
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEeHHH------------------------hhhHHHHHHHHHHH
Confidence            46789999999999999999999964 579999999995210                        00122345577899


Q ss_pred             HHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          125 NTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       125 ~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      .++..++||||+++++++.+++  .+++++||+.++++          +++..+..++.|++.||.|||+.+   ++|||
T Consensus       113 ~il~~~~hp~Iv~l~~~~~~~~--~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrD  187 (412)
T 2vd5_A          113 DVLVNGDRRWITQLHFAFQDEN--YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG---YVHRD  187 (412)
T ss_dssp             HHHHHSCTTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCC
T ss_pred             HHHHhcCCCCeeeEEEEEeeCC--EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecc
Confidence            9999999999999999998776  79999999988654          555566789999999999999998   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccc-------ccccCccchhh-HHHHHHHHHhC
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ-------MLTLTEKCDIY-FGALLAGLVMG  266 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~-------~~~~~~~~Dvw-lG~vl~el~tg  266 (345)
                      |||+|||++.++.+||+|||++........ ......+||+.|+|||++.       +..++.++||| +|+++|||++|
T Consensus       188 LKp~NILld~~g~vkL~DFGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG  266 (412)
T 2vd5_A          188 IKPDNILLDRCGHIRLADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG  266 (412)
T ss_dssp             CSGGGEEECTTSCEEECCCTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHS
T ss_pred             cCHHHeeecCCCCEEEeechhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhC
Confidence            999999999999999999999987654322 1233468999999999997       35689999999 99999999999


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCC---CCHHHHHH
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNER---PNSKDVRR  338 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~R---pt~~~ll~  338 (345)
                      ..||..    .+.......+...........         ........+.++|..||+ +|.+|   |+++++++
T Consensus       267 ~~Pf~~----~~~~~~~~~i~~~~~~~~~p~---------~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          267 QTPFYA----DSTAETYGKIVHYKEHLSLPL---------VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             SCTTCC----SSHHHHHHHHHTHHHHCCCC-------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             CCCCCC----CCHHHHHHHHHhcccCcCCCc---------cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            999743    233333333322111111100         001112347789999999 99998   58888864


No 148
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=3.7e-40  Score=312.01  Aligned_cols=242  Identities=25%  Similarity=0.390  Sum_probs=192.5

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|.+++.||+|+||.||+|++. .+|+.||||.+......                        .......+.+|+.
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~-~~g~~vAvK~i~~~~~~------------------------~~~~~~~~~~Ei~   68 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHE-LTGHKVAVKILNRQKIR------------------------SLDVVGKIRREIQ   68 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEET-TTCCEEEEEEEEHHHHH------------------------HTTTHHHHHHHHH
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhhhcc------------------------CHHHHHHHHHHHH
Confidence            4568999999999999999999864 57999999998521100                        0122567889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCC---------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR---------ELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~---------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++..++  .+++++|++.+++         .++......++.|++.||.|||+.+   ++|||||
T Consensus        69 ~l~~l~HpnIv~l~~~~~~~~--~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLk  143 (476)
T 2y94_A           69 NLKLFRHPHIIKLYQVISTPS--DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLK  143 (476)
T ss_dssp             HHTTCCCTTBCCEEEEEECSS--EEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCS
T ss_pred             HHHhCCCCCCCcEEEEEEECC--EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCccccc
Confidence            999999999999999998776  6899999997753         3677888999999999999999998   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc-Cccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL-TEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~-~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      |+||+++.++.+||+|||++.......   .....+||+.|+|||.+.+..+ +.++||| +|+++|+|++|..||... 
T Consensus       144 p~NIll~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-  219 (476)
T 2y94_A          144 PENVLLDAHMNAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD-  219 (476)
T ss_dssp             GGGEEECTTCCEEECCCSSCEECCTTC---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS-
T ss_pred             HHHEEEecCCCeEEEeccchhhccccc---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC-
Confidence            999999999999999999998765432   2344689999999999998775 6899999 999999999999997532 


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         ........+....   ...       + ..   ....+.+++..||+.||++|||+.++++
T Consensus       220 ---~~~~~~~~i~~~~---~~~-------p-~~---~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          220 ---HVPTLFKKICDGI---FYT-------P-QY---LNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             ---SSHHHHHHHHTTC---CCC-------C-TT---CCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ---CHHHHHHHHhcCC---cCC-------C-cc---CCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence               2233333332211   100       0 01   1124778899999999999999999986


No 149
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=5.5e-40  Score=295.21  Aligned_cols=253  Identities=22%  Similarity=0.271  Sum_probs=185.9

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .+++.||+|.+.......                        ......+.+|+.
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~------------------------~~~~~~~~~e~~   86 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDT-VRERIVALKLMSETLSSD------------------------PVFRTRMQREAR   86 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEET-TTTEEEEEEECGGGGGGS------------------------HHHHHHHHHHHH
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEc-CCCeEEEEEecCcccccC------------------------HHHHHHHHHHHH
Confidence            4679999999999999999999854 578999999985432211                        223567889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++..++  .++++++++.++++         +++.....++.|++.||.|||+.+   ++|+|||
T Consensus        87 ~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlk  161 (309)
T 2h34_A           87 TAGRLQEPHVVPIHDFGEIDG--QLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVK  161 (309)
T ss_dssp             HHTTCCCTTBCCEEEEEEETT--EEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCC
T ss_pred             HHhhcCCCCeeEEEEEEeeCC--eEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCC
Confidence            999999999999999998776  68899999987543         566777899999999999999998   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      |+||+++.++.+||+|||++......... ......|++.|+|||.+.+..++.++||| +|+++|+|++|..||...  
T Consensus       162 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--  238 (309)
T 2h34_A          162 PENILVSADDFAYLVDFGIASATTDEKLT-QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD--  238 (309)
T ss_dssp             GGGEEECTTSCEEECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC--
T ss_pred             hHHEEEcCCCCEEEecCccCccccccccc-cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc--
Confidence            99999999999999999998765443211 22346789999999999998899999999 999999999999997532  


Q ss_pred             ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHhhhh
Q 046907          276 HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERP-NSKDVRRMLSQIQ  344 (345)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rp-t~~~ll~~L~~l~  344 (345)
                        ........+.    ...+...   .    ..+.....+.+++..||+.||++|| |+.++++.|+++.
T Consensus       239 --~~~~~~~~~~----~~~~~~~---~----~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          239 --QLSVMGAHIN----QAIPRPS---T----VRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             --HHHHHHHHHH----SCCCCGG---G----TSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             --hHHHHHHHhc----cCCCCcc---c----cCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence              2222222221    1111100   0    0111222477889999999999999 9999999998763


No 150
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=8.5e-41  Score=309.35  Aligned_cols=253  Identities=18%  Similarity=0.248  Sum_probs=187.7

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ....++|++.+.||+|+||.||+|+.. .+|+.||||.+.....                               ...+|
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~~~~~~~-------------------------------~~~~E   50 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDI-ESGKRFALKKVLQDPR-------------------------------YKNRE   50 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEET-TTCCEEEEEEEECCTT-------------------------------SCCHH
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEEC-CCCCEEEEEEEecCcc-------------------------------hHHHH
Confidence            346779999999999999999999854 5899999999864321                               12369


Q ss_pred             HHHHhhccCCCccceeEEEecC------------------------------------CcceeeeeccccCCC-------
Q 046907          124 INTVGQIRHRNLHPLLAHVTRP------------------------------------DCHLLYILNDVSQGR-------  160 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~------------------------------------~~~~l~~~~~~~~~~-------  160 (345)
                      +.+++.++||||+++++++...                                    +...+++++++++++       
T Consensus        51 ~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~  130 (383)
T 3eb0_A           51 LDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKS  130 (383)
T ss_dssp             HHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSEEHHHHHHH
T ss_pred             HHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHH
Confidence            9999999999999999988553                                    233578999999753       


Q ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeec-CCCCeEEeccccceecCCCCcceeccCcccC
Q 046907          161 -----RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLD-DDIEARISGFGFARAIPDAHTHITTSNVVGT  234 (345)
Q Consensus       161 -----~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt  234 (345)
                           ..+++..+..++.|++.||.|||+.+   ++||||||+||+++ .++.+||+|||++........   .....||
T Consensus       131 ~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t  204 (383)
T 3eb0_A          131 FIRSGRSIPMNLISIYIYQLFRAVGFIHSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICS  204 (383)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCC
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccC
Confidence                 45777788899999999999999998   99999999999998 688999999999987644332   2346789


Q ss_pred             ccccccccccccc-cCccchhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCcc----------cccc
Q 046907          235 VEYIAPEYLQMLT-LTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRA----------IDSK  302 (345)
Q Consensus       235 ~~~~aPE~~~~~~-~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~  302 (345)
                      +.|+|||.+.+.. ++.++||| +|+++|||++|..||..    ....+....+......+.....          ..+.
T Consensus       205 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~----~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~  280 (383)
T 3eb0_A          205 RFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSG----ETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPT  280 (383)
T ss_dssp             SSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC----SSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCC
T ss_pred             CCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCC----CChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCc
Confidence            9999999988754 89999999 99999999999999653    2333333333332222111000          0000


Q ss_pred             ccCC-----CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          303 LVGN-----GCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       303 ~~~~-----~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ....     ........+.+++..||+.||.+|||+.++++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          281 LKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             CCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            0000     11112345788999999999999999999974


No 151
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=3.7e-40  Score=291.11  Aligned_cols=245  Identities=23%  Similarity=0.355  Sum_probs=190.2

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.. .+++.||+|.+......                          .....+.+|+.+
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~e~~~   58 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRAV--------------------------DCPENIKKEICI   58 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEGGGCT--------------------------THHHHHHHHHHH
T ss_pred             ecceEEEEEeecCCCcEEEEEEEC-CCCcEEEEEEeeeccch--------------------------hhhHHHHHHHHH
Confidence            468999999999999999999864 57899999998532111                          124567789999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCC---------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR---------ELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~---------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++..++  ..+++++++++++         .++......++.|++.||.|||+.+   ++|+||||
T Consensus        59 l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p  133 (276)
T 2yex_A           59 NKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKP  133 (276)
T ss_dssp             HHTCCCTTBCCEEEEEEETT--EEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSG
T ss_pred             HHhcCCCCceeeeeEEEcCC--EEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCh
Confidence            99999999999999998766  6788899987753         3667788899999999999999998   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc-Cccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL-TEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~-~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      +||+++.++.++|+|||.+................||..|+|||.+.+..+ +.++||| +|+++|+|++|..||.....
T Consensus       134 ~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  213 (276)
T 2yex_A          134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD  213 (276)
T ss_dssp             GGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT
T ss_pred             HHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch
Confidence            999999999999999999986543322222345678999999999988775 7789999 99999999999999865322


Q ss_pred             ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          276 HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .  ......+...    .....         ........+.+++..||+.||++|||+.++++
T Consensus       214 ~--~~~~~~~~~~----~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          214 S--CQEYSDWKEK----KTYLN---------PWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             T--SHHHHHHHTT----CTTST---------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             H--HHHHHHhhhc----ccccC---------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            1  1112111111    00000         00112234778999999999999999999875


No 152
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=1.3e-40  Score=302.01  Aligned_cols=256  Identities=21%  Similarity=0.256  Sum_probs=184.5

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.. .+++.||||.+......                         ......+.+|+.
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~~E~~   85 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDT-VTNETVAIKRIRLEHEE-------------------------EGVPGTAIREVS   85 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEET-TTTEEEEEEECCCCC---------------------------------CHHHHH
T ss_pred             chhhEEEEEEEEecCCeEEEEEEEC-CCCceEEEEEEcccccc-------------------------cccchhHHHHHH
Confidence            5568999999999999999999854 57999999999654322                         223556778999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCC--------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR--------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~--------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +++.++||||+++++++..++  .++++++++.+.        ..+++..+..++.|++.||.|||+.+   ++||||||
T Consensus        86 ~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp  160 (329)
T 3gbz_A           86 LLKELQHRNIIELKSVIHHNH--RLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKP  160 (329)
T ss_dssp             HGGGCCCTTBCCEEEEEEETT--EEEEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCG
T ss_pred             HHHHcCCCCcceEEEEEecCC--EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCH
Confidence            999999999999999998776  688999998752        23677778899999999999999999   99999999


Q ss_pred             CCeeec-----CCCCeEEeccccceecCCCCcceeccCcccCccccccccccccc-cCccchhh-HHHHHHHHHhCCCCC
Q 046907          198 VNVLLD-----DDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT-LTEKCDIY-FGALLAGLVMGKLPS  270 (345)
Q Consensus       198 ~nil~~-----~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~-~~~~~Dvw-lG~vl~el~tg~~p~  270 (345)
                      +|||++     ..+.+||+|||++........  ......||..|+|||++.+.. ++.++||| +|+++|+|++|..||
T Consensus       161 ~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf  238 (329)
T 3gbz_A          161 QNLLLSVSDASETPVLKIGDFGLARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF  238 (329)
T ss_dssp             GGEEEEC-----CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             HHEEEecCCCCccceEEECcCCCccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence            999994     445699999999986643221  223457899999999998754 89999999 999999999999996


Q ss_pred             cccccccchhhHHHHHHHHhhhcCCCcccc-----------ccccCCCcH-----HHHHHHHHHHhhccCCCCCCCCCHH
Q 046907          271 DKFFQHTNEMSFVKWMRNVMASENPKRAID-----------SKLVGNGCE-----EQMLLVLKIACFCTLEDPNERPNSK  334 (345)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~-----~~~~~l~~li~~Cl~~dp~~Rpt~~  334 (345)
                      ..    ....+....+......+.......           +........     .....+.+++..||+.||++|||+.
T Consensus       239 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  314 (329)
T 3gbz_A          239 PG----DSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAK  314 (329)
T ss_dssp             CC----SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CC----CCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHH
Confidence            43    233333333333322221110000           000000000     0224578899999999999999999


Q ss_pred             HHHH
Q 046907          335 DVRR  338 (345)
Q Consensus       335 ~ll~  338 (345)
                      ++++
T Consensus       315 e~l~  318 (329)
T 3gbz_A          315 NALE  318 (329)
T ss_dssp             HHHT
T ss_pred             HHhC
Confidence            9986


No 153
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=2.1e-40  Score=301.75  Aligned_cols=257  Identities=23%  Similarity=0.345  Sum_probs=195.2

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++.+.||+|+||.||+|++   +|+.||||.+...                              ....+.+|..
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~------------------------------~~~~~~~e~~   86 (342)
T 1b6c_B           40 IARTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSR------------------------------EERSWFREAE   86 (342)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEE---TTEEEEEEEECGG------------------------------GHHHHHHHHH
T ss_pred             ccccEEEEeeecCCCCcEEEEEEE---cCccEEEEEeCch------------------------------hHHHHHHHHH
Confidence            346899999999999999999986   5889999998521                              1334567788


Q ss_pred             HHhh--ccCCCccceeEEEecCCcc--eeeeeccccCCCCC--------CCHHHHHHHHHHHHHHHHHHh--------hc
Q 046907          126 TVGQ--IRHRNLHPLLAHVTRPDCH--LLYILNDVSQGRRE--------LDWLARHRIALGLACGLEYLH--------MH  185 (345)
Q Consensus       126 ~l~~--l~hpniv~l~~~~~~~~~~--~l~~~~~~~~~~~~--------l~~~~~~~i~~~i~~~l~~lh--------~~  185 (345)
                      ++..  ++||||+++++++..++..  .++++++++.++++        +++.....++.|++.||.|||        +.
T Consensus        87 ~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~  166 (342)
T 1b6c_B           87 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP  166 (342)
T ss_dssp             HHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC
T ss_pred             HHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC
Confidence            8876  7999999999998876532  68899999988765        556677889999999999999        77


Q ss_pred             CCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcce--eccCcccCcccccccccccc------ccCccchhh-H
Q 046907          186 HCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHI--TTSNVVGTVEYIAPEYLQML------TLTEKCDIY-F  256 (345)
Q Consensus       186 ~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~gt~~~~aPE~~~~~------~~~~~~Dvw-l  256 (345)
                      +   ++||||||+||+++.++.+||+|||++..........  ......||+.|+|||.+.+.      .++.++||| +
T Consensus       167 ~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~sl  243 (342)
T 1b6c_B          167 A---IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM  243 (342)
T ss_dssp             E---EECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHH
T ss_pred             C---eeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHH
Confidence            7   9999999999999999999999999998765433221  23456899999999999875      334789999 9


Q ss_pred             HHHHHHHHhC----------CCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCC
Q 046907          257 GALLAGLVMG----------KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLED  326 (345)
Q Consensus       257 G~vl~el~tg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~d  326 (345)
                      |+++|||++|          ..||..........  ........ ..........+.   ...++...+.+++.+||+.|
T Consensus       244 G~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~d  317 (342)
T 1b6c_B          244 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV--EEMRKVVC-EQKLRPNIPNRW---QSCEALRVMAKIMRECWYAN  317 (342)
T ss_dssp             HHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH--HHHHHHHT-TSCCCCCCCGGG---GTSHHHHHHHHHHHHHCCSS
T ss_pred             HHHHHHHHhccCcCCcccccccCccccCcCcccH--HHHHHHHH-HHHhCCCCcccc---cchhHHHHHHHHHHHHhccC
Confidence            9999999999          77865433322111  11111111 111111111111   12356677899999999999


Q ss_pred             CCCCCCHHHHHHHHhhhh
Q 046907          327 PNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       327 p~~Rpt~~~ll~~L~~l~  344 (345)
                      |++|||+.+|++.|+++.
T Consensus       318 p~~Rps~~~i~~~L~~i~  335 (342)
T 1b6c_B          318 GAARLTALRIKKTLSQLS  335 (342)
T ss_dssp             GGGSCCHHHHHHHHHHHH
T ss_pred             hhhCCCHHHHHHHHHHHH
Confidence            999999999999999884


No 154
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=2.3e-40  Score=295.34  Aligned_cols=255  Identities=19%  Similarity=0.260  Sum_probs=195.6

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .+|+.||||.+.....                             ...+.+|+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~-----------------------------~~~~~~e~~   56 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECVKTK-----------------------------HPQLHIESK   56 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEEESCSS-----------------------------CCHHHHHHH
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEc-CCCcEEEEEEecCCcc-----------------------------hhHHHHHHH
Confidence            4579999999999999999999854 5799999999864321                             234678999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCC---------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG---------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~---------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++|++++..+..+...+ ...+++++++.+         ...+++..+..++.|++.||.|||+.+   ++|||||
T Consensus        57 ~l~~l~~~~~i~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlk  132 (296)
T 3uzp_A           57 IYKMMQGGVGIPTIRWCGAEG-DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVK  132 (296)
T ss_dssp             HHHHHTTSTTCCCEEEEEEET-TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCC
T ss_pred             HHHHhhcCCCCCccccccCCC-CceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCC
Confidence            999999998887777665443 367889999832         224677778899999999999999999   9999999


Q ss_pred             CCCeee---cCCCCeEEeccccceecCCCCcce-----eccCcccCccccccccccccccCccchhh-HHHHHHHHHhCC
Q 046907          197 PVNVLL---DDDIEARISGFGFARAIPDAHTHI-----TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGK  267 (345)
Q Consensus       197 ~~nil~---~~~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~  267 (345)
                      |+||++   +.++.+||+|||++..........     ......||+.|+|||.+.+..++.++||| +|+++|+|++|.
T Consensus       133 p~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  212 (296)
T 3uzp_A          133 PDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS  212 (296)
T ss_dssp             GGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCC
Confidence            999999   478899999999998765543211     12456899999999999999999999999 999999999999


Q ss_pred             CCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          268 LPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       268 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      .||......................+.  ...    .    ......+.+++..||+.||++|||+.++++.|+++.
T Consensus       213 ~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  279 (296)
T 3uzp_A          213 LPWQGLKAATKRQKYERISEKKMSTPI--EVL----C----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             CTTSSCCCSSSSSHHHHHHHHHHHSCH--HHH----T----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             CCCCCcCchhhhhhhhhhcccccCCch--HHH----H----hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence            998764433333333332222221110  000    0    011234778899999999999999999999999874


No 155
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1.1e-40  Score=294.94  Aligned_cols=251  Identities=23%  Similarity=0.335  Sum_probs=194.8

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .+++.||+|.+.....+                         ....+.+.+|+.
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~~e~~   57 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGSMT-------------------------EAEKQMLVSEVN   57 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEECTTCC-------------------------HHHHHHHHHHHH
T ss_pred             chhheeeehhccCCCCcEEEEEEEC-CCCcEEEEEEEEcccCC-------------------------HHHHHHHHHHHH
Confidence            4578999999999999999999864 57999999999754322                         223567889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-------------CCHHHHHHHHHHHHHHHHHHhhcC--CCCe
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------LDWLARHRIALGLACGLEYLHMHH--CPRI  190 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------l~~~~~~~i~~~i~~~l~~lh~~~--~~~i  190 (345)
                      +++.++||||+++++++.......+++++++++++++             +++.....++.|++.||.|||+.+  ..++
T Consensus        58 ~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~i  137 (279)
T 2w5a_A           58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTV  137 (279)
T ss_dssp             HHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred             HHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCee
Confidence            9999999999999998876555689999999987543             667778899999999999999986  1239


Q ss_pred             EecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCC
Q 046907          191 IHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP  269 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p  269 (345)
                      +|+||||+||+++.++.+||+|||++........  ......|+..|+|||.+.+..++.++||| +|+++|+|++|..|
T Consensus       138 vH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  215 (279)
T 2w5a_A          138 LHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP  215 (279)
T ss_dssp             CCCCCSGGGEEECSSSCEEECCCCHHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             EEeccchhhEEEcCCCCEEEecCchheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            9999999999999999999999999976543221  12235789999999999998899999999 99999999999999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLS  341 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~  341 (345)
                      |...    ...+....+........+             ......+.+++.+||+.||.+|||+.+|++.+.
T Consensus       216 ~~~~----~~~~~~~~i~~~~~~~~~-------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~  270 (279)
T 2w5a_A          216 FTAF----SQKELAGKIREGKFRRIP-------------YRYSDELNEIITRMLNLKDYHRPSVEEILENPL  270 (279)
T ss_dssp             SCCS----SHHHHHHHHHHTCCCCCC-------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             Cccc----CHHHHHHHHhhcccccCC-------------cccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence            7542    333333333332211111             112234778899999999999999999997654


No 156
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.5e-40  Score=303.15  Aligned_cols=253  Identities=22%  Similarity=0.292  Sum_probs=188.3

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ..-.++|++.+.||+|+||.||+|+.. .++..||+|.+......                      .......+.+.+|
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~----------------------~~~~~~~~~~~~E   78 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIEN-QTRAIRAIKIMNKNKIR----------------------QINPKDVERIKTE   78 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHH----------------------C---CHHHHHHHH
T ss_pred             hhhhhheeecceeeecCCeEEEEEEEC-CCCceEEEeehhhhhhc----------------------ccCHHHHHHHHHH
Confidence            446678999999999999999999854 67899999998521100                      0012346778899


Q ss_pred             HHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCCC----------------------------------------
Q 046907          124 INTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRREL----------------------------------------  163 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~l----------------------------------------  163 (345)
                      +.+++.++||||+++++++...+  .+++++++++++++.                                        
T Consensus        79 ~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (345)
T 3hko_A           79 VRLMKKLHHPNIARLYEVYEDEQ--YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHG  156 (345)
T ss_dssp             HHHHHHCCCTTBCCEEEEEECSS--EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--
T ss_pred             HHHHHhCCCCCcceeehhhccCC--eEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence            99999999999999999998766  789999999886542                                        


Q ss_pred             ---------CHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCC--CeEEeccccceecCCCCc--ceeccC
Q 046907          164 ---------DWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDI--EARISGFGFARAIPDAHT--HITTSN  230 (345)
Q Consensus       164 ---------~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~--~~kl~Dfg~a~~~~~~~~--~~~~~~  230 (345)
                               +......++.|++.||.|||+.+   ++||||||+||+++.++  .+||+|||++........  ......
T Consensus       157 ~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  233 (345)
T 3hko_A          157 FRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTT  233 (345)
T ss_dssp             CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-------
T ss_pred             ccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccc
Confidence                     23345679999999999999998   99999999999998666  899999999986643211  112345


Q ss_pred             cccCccccccccccc--cccCccchhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCC
Q 046907          231 VVGTVEYIAPEYLQM--LTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNG  307 (345)
Q Consensus       231 ~~gt~~~~aPE~~~~--~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (345)
                      ..||+.|+|||.+.+  ..++.++||| +|+++|||++|..||...    ........+..   .......       ..
T Consensus       234 ~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~----~~~~~~~~~~~---~~~~~~~-------~~  299 (345)
T 3hko_A          234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGV----NDADTISQVLN---KKLCFEN-------PN  299 (345)
T ss_dssp             -CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHHHH---CCCCTTS-------GG
T ss_pred             cCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC----ChHHHHHHHHh---cccccCC-------cc
Confidence            679999999999975  5688999999 999999999999997432    22222222221   1111000       00


Q ss_pred             cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          308 CEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       308 ~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .......+.+++..||+.||.+|||+.++++
T Consensus       300 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          300 YNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             GGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            1112234778999999999999999999986


No 157
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2e-40  Score=302.74  Aligned_cols=259  Identities=23%  Similarity=0.260  Sum_probs=187.3

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|++. .+|+.||||.+........                      .......+.+|+.
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~----------------------~~~~~~~~~~E~~   64 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDK-NTNQIVAIKKIKLGHRSEA----------------------KDGINRTALREIK   64 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECS-SCCSEEEEEEC----------------------------------CTHHHHHHH
T ss_pred             HhcccEEEeEEeecCCEEEEEEEEC-CCCcEEEEEEEecCCcchh----------------------hhhhhHHHHHHHH
Confidence            5679999999999999999999864 5789999999964321110                      0112346778999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR---------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++...+  .++++++++.++         ..+++..+..++.|++.||.|||+.+   ++|||||
T Consensus        65 ~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlk  139 (346)
T 1ua2_A           65 LLQELSHPNIIGLLDAFGHKS--NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLK  139 (346)
T ss_dssp             HHHHCCCTTBCCEEEEECCTT--CCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCC
T ss_pred             HHhhCCCCCCCeEEEEEeeCC--ceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCC
Confidence            999999999999999987765  577888888652         24667778899999999999999999   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccc-ccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQML-TLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~-~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      |+||+++.++.+||+|||++........  ......||+.|+|||.+.+. .++.++||| +|+++|+|++|.+||..  
T Consensus       140 p~Nil~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~--  215 (346)
T 1ua2_A          140 PNNLLLDENGVLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG--  215 (346)
T ss_dssp             GGGEEECTTCCEEECCCGGGSTTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC--
T ss_pred             HHHEEEcCCCCEEEEecccceeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCC--
Confidence            9999999999999999999986643321  22346789999999999764 478999999 99999999999999643  


Q ss_pred             cccchhhHHHHHHHHhhhcCCCcccc---------ccccCCCc-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAID---------SKLVGNGC-----EEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-----~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                        ....+....+......+......+         ....+...     ......+.+++..||+.||++|||+.++++
T Consensus       216 --~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          216 --DSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             --SSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             --CCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence              233333333333332221111000         00000111     122356888999999999999999999986


No 158
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=6.2e-40  Score=290.38  Aligned_cols=241  Identities=22%  Similarity=0.340  Sum_probs=187.8

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      +.++|++.+.||+|+||.||+|++. .++..||+|.+......                        .......+.+|+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~e~~   61 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREK-QSKFILALKVLFKAQLE------------------------KAGVEHQLRREVE   61 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHH------------------------HHTCHHHHHHHHH
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEc-cCCcEEEEEEEeccccc------------------------hhhHHHHHHHHHH
Confidence            4578999999999999999999864 57889999998421100                        0122456788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++...+  ..++++++++++.+         ++......++.|++.||.|||+.+   ++|+|||
T Consensus        62 ~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlk  136 (279)
T 3fdn_A           62 IQSHLRHPNILRLYGYFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK  136 (279)
T ss_dssp             HHTTCCCTTBCCEEEEEECSS--EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCC
T ss_pred             HHHcCCCCCCcchhheEecCC--EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCC
Confidence            999999999999999998775  68899999987644         566677889999999999999998   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      |+||+++.++.++|+|||++......    ......|++.|+|||.+.+..++.++||| +|+++|+|++|..||..   
T Consensus       137 p~Nili~~~~~~~l~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~---  209 (279)
T 3fdn_A          137 PENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA---  209 (279)
T ss_dssp             GGGEEECTTSCEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC---
T ss_pred             hHhEEEcCCCCEEEEeccccccCCcc----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC---
Confidence            99999999999999999988654332    12346789999999999998899999999 99999999999999753   


Q ss_pred             ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          276 HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                       .........+....   ..           .+......+.+++..||+.||.+|||+.++++
T Consensus       210 -~~~~~~~~~~~~~~---~~-----------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          210 -NTYQETYKRISRVE---FT-----------FPDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             -SSHHHHHHHHHHTC---CC-----------CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             -CcHHHHHHHHHhCC---CC-----------CCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence             22223333222211   11           00111234678899999999999999999986


No 159
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=9.2e-41  Score=297.04  Aligned_cols=242  Identities=15%  Similarity=0.235  Sum_probs=187.9

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCC-------ceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNG-------RMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMR  118 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (345)
                      ..++|++.+.||+|+||.||+|+++. ++       ..||+|.+....                           ....+
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~~~~~~~va~K~~~~~~---------------------------~~~~~   57 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRRE-VGDYGQLHETEVLLKVLDKAH---------------------------RNYSE   57 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEE-ECGGGCEEEEEEEEEEECGGG---------------------------GGGHH
T ss_pred             chhHeeeeeeeccCCCceEEEEEEec-ccccccccchhhhhhhccccc---------------------------HHHHH
Confidence            46789999999999999999998652 33       579999985321                           11245


Q ss_pred             HHHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCC
Q 046907          119 QIQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCP  188 (345)
Q Consensus       119 ~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~  188 (345)
                      .+.+|+.+++.++||||+++++++..++  ..+++++++.++++          ++...+..++.|++.||.|||+.+  
T Consensus        58 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--  133 (289)
T 4fvq_A           58 SFFEAASMMSKLSHKHLVLNYGVCVCGD--ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT--  133 (289)
T ss_dssp             HHHHHHHHHHTSCCTTBCCEEEEECCTT--CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHHHHHHHHHhCCCCCEeEEEEEEEeCC--CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC--
Confidence            6789999999999999999999998766  56889999987654          666677889999999999999999  


Q ss_pred             CeEecCCCCCCeeecCCCC--------eEEeccccceecCCCCcceeccCcccCccccccccccc-cccCccchhh-HHH
Q 046907          189 RIIHRDLNPVNVLLDDDIE--------ARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGA  258 (345)
Q Consensus       189 ~iiH~dlk~~nil~~~~~~--------~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~  258 (345)
                       ++||||||+||+++.++.        +||+|||++......      ....||..|+|||.+.+ ..++.++||| +|+
T Consensus       134 -ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~  206 (289)
T 4fvq_A          134 -LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGT  206 (289)
T ss_dssp             -CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHH
T ss_pred             -eECCCcCcceEEEecCCcccccccceeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHH
Confidence             999999999999998776        999999998654321      23567899999999987 6689999999 999


Q ss_pred             HHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          259 LLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       259 vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ++|+|++|..|+   +..............   ........+            ..+.+++..||+.||++|||+.++++
T Consensus       207 il~el~~g~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~------------~~l~~li~~~l~~dp~~Rps~~~ll~  268 (289)
T 4fvq_A          207 TLWEICSGGDKP---LSALDSQRKLQFYED---RHQLPAPKA------------AELANLINNCMDYEPDHRPSFRAIIR  268 (289)
T ss_dssp             HHHHHHTTTCCT---TTTSCHHHHHHHHHT---TCCCCCCSS------------CTTHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCCCC---ccccchHHHHHHhhc---cCCCCCCCC------------HHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999965442   222222222222211   111111111            12778999999999999999999999


Q ss_pred             HHhhhh
Q 046907          339 MLSQIQ  344 (345)
Q Consensus       339 ~L~~l~  344 (345)
                      .|+++.
T Consensus       269 ~l~~l~  274 (289)
T 4fvq_A          269 DLNSLF  274 (289)
T ss_dssp             HHHTCC
T ss_pred             HHHHhc
Confidence            999874


No 160
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=3.4e-41  Score=305.12  Aligned_cols=253  Identities=18%  Similarity=0.254  Sum_probs=186.5

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++++.||+|+||.||+|+.. .+++.||+|.+......                          .....+.+|+.++
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~E~~~l   54 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSK-LTDNLVALKEIRLEHEE--------------------------GAPCTAIREVSLL   54 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECC--------------------------------CCCCCCCHHHH
T ss_pred             CceEEEEEEcCCCCEEEEEEEEC-CCCcEEEEEEEeccccc--------------------------ccchhHHHHHHHH
Confidence            58999999999999999999864 57899999998643211                          1122345799999


Q ss_pred             hhccCCCccceeEEEecCCcceeeeeccccCC---------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 046907          128 GQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG---------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPV  198 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~---------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~  198 (345)
                      +.++||||+++++++..++  .++++++++++         +..++...+..++.|++.||.|||+.+   ++||||||+
T Consensus        55 ~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~  129 (324)
T 3mtl_A           55 KDLKHANIVTLHDIIHTEK--SLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQ  129 (324)
T ss_dssp             SCCCCTTBCCEEEEEECSS--CEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGG
T ss_pred             HhcCCCCCCeeeeEEeeCC--EEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHH
Confidence            9999999999999998776  68899999875         234677788899999999999999999   999999999


Q ss_pred             CeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-cccCccchhh-HHHHHHHHHhCCCCCcccccc
Q 046907          199 NVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGALLAGLVMGKLPSDKFFQH  276 (345)
Q Consensus       199 nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~  276 (345)
                      ||+++.++.+||+|||++........  ......||+.|+|||.+.+ ..++.++||| +|+++|+|++|..||..    
T Consensus       130 NIl~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~----  203 (324)
T 3mtl_A          130 NLLINERGELKLADFGLARAKSIPTK--TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG----  203 (324)
T ss_dssp             GEEECTTCCEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC----
T ss_pred             HEEECCCCCEEEccCcccccccCCcc--ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC----
Confidence            99999999999999999976543221  2234578999999999976 4589999999 99999999999999643    


Q ss_pred             cchhhHHHHHHHHhhhcCCCccc---cc---------cccCC----CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          277 TNEMSFVKWMRNVMASENPKRAI---DS---------KLVGN----GCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~---~~---------~~~~~----~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ....+....+......+......   ..         .....    ..+.....+.+++..||+.||.+|||+.++++
T Consensus       204 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          204 STVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             SSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            34444445554444332221110   00         00000    00112345778999999999999999999976


No 161
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=4.1e-40  Score=301.14  Aligned_cols=260  Identities=23%  Similarity=0.307  Sum_probs=196.4

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.. .+|+.||+|.+........                         ....+.+|+.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~-------------------------~~~~~~~E~~   68 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHR-KTGQKVALKKVLMENEKEG-------------------------FPITALREIK   68 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEET-TTCCEEEEEECCCSSCSSS-------------------------SCHHHHHHHH
T ss_pred             cccceeEEEEEecCCCcEEEEEEEC-CCCCEEEEEEEeccccccc-------------------------chHHHHHHHH
Confidence            4579999999999999999999964 5799999999865433211                         1345668999


Q ss_pred             HHhhccCCCccceeEEEecCC------cceeeeeccccCC---------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          126 TVGQIRHRNLHPLLAHVTRPD------CHLLYILNDVSQG---------RRELDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~------~~~l~~~~~~~~~---------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      +++.++||||+++++++....      ...++++++++.+         ...+++..+..++.|++.||.|||+.+   +
T Consensus        69 ~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i  145 (351)
T 3mi9_A           69 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---I  145 (351)
T ss_dssp             HHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             HHHhccCCCcccHhheeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            999999999999999988754      2368899999875         234788889999999999999999999   9


Q ss_pred             EecCCCCCCeeecCCCCeEEeccccceecCCCCc--ceeccCcccCcccccccccccc-ccCccchhh-HHHHHHHHHhC
Q 046907          191 IHRDLNPVNVLLDDDIEARISGFGFARAIPDAHT--HITTSNVVGTVEYIAPEYLQML-TLTEKCDIY-FGALLAGLVMG  266 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~gt~~~~aPE~~~~~-~~~~~~Dvw-lG~vl~el~tg  266 (345)
                      +||||||+||+++.++.+||+|||++........  ........||+.|+|||++.+. .++.++||| +|+++|+|++|
T Consensus       146 vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g  225 (351)
T 3mi9_A          146 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR  225 (351)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHS
T ss_pred             eCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999987653221  1223456789999999999764 579999999 99999999999


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCcccc---ccc------c---CCCcHHH------HHHHHHHHhhccCCCCC
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAID---SKL------V---GNGCEEQ------MLLVLKIACFCTLEDPN  328 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~---~~~~~~~------~~~l~~li~~Cl~~dp~  328 (345)
                      ..||..    .........+........+.....   ...      .   .....+.      ...+.+++.+||+.||+
T Consensus       226 ~~pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  301 (351)
T 3mi9_A          226 SPIMQG----NTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA  301 (351)
T ss_dssp             SCSCCC----SSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGG
T ss_pred             CCCCCC----CChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChh
Confidence            999653    344444444444433222211000   000      0   0001111      23478899999999999


Q ss_pred             CCCCHHHHHH
Q 046907          329 ERPNSKDVRR  338 (345)
Q Consensus       329 ~Rpt~~~ll~  338 (345)
                      +|||+.++++
T Consensus       302 ~R~t~~e~l~  311 (351)
T 3mi9_A          302 QRIDSDDALN  311 (351)
T ss_dssp             GSCCHHHHHT
T ss_pred             hCCCHHHHhC
Confidence            9999999985


No 162
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=9e-41  Score=303.15  Aligned_cols=258  Identities=23%  Similarity=0.375  Sum_probs=190.6

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ....++|++++.||+|+||.||+|+.. .+|+.||+|.+.....+                         ......+.+|
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~E   74 (331)
T 4aaa_A           21 FQSMEKYENLGLVGEGSYGMVMKCRNK-DTGRIVAIKKFLESDDD-------------------------KMVKKIAMRE   74 (331)
T ss_dssp             CBCGGGEEEEEEGGGGTTSSEEEEEET-TTCCEEEEEEEESCSSC-------------------------HHHHHHHHHH
T ss_pred             hhhhhhheeeeEEeecCCEEEEEEEEC-CCCceEEEEEEecCCCc-------------------------hHHHHHHHHH
Confidence            446779999999999999999999864 57999999998654322                         2235567789


Q ss_pred             HHHHhhccCCCccceeEEEecCCcceeeeeccccCCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          124 INTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR---------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      +.+++.++||||+++++++...+  .+++++++++++         ..+++.....++.|++.||.|||+.+   ++|||
T Consensus        75 ~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~d  149 (331)
T 4aaa_A           75 IKLLKQLRHENLVNLLEVCKKKK--RWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRD  149 (331)
T ss_dssp             HHHHHHCCCTTBCCEEEEEEETT--EEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCC
T ss_pred             HHHHhhCCCCCEeeEEEEeecCC--EEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccC
Confidence            99999999999999999998776  688999998764         34677888899999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccc-ccCccchhh-HHHHHHHHHhCCCCCcc
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQML-TLTEKCDIY-FGALLAGLVMGKLPSDK  272 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~-~~~~~~Dvw-lG~vl~el~tg~~p~~~  272 (345)
                      |||+||+++.++.+||+|||++........  ......||..|+|||.+.+. .++.++||| +|+++|+|++|..||..
T Consensus       150 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  227 (331)
T 4aaa_A          150 IKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPG  227 (331)
T ss_dssp             CCGGGEEECTTSCEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cChheEEEcCCCcEEEEeCCCceeecCCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999999976543322  22346789999999999875 688999999 99999999999999754


Q ss_pred             cccccchhhHHHHHHHHhhhcCC------------CccccccccCC-----CcHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 046907          273 FFQHTNEMSFVKWMRNVMASENP------------KRAIDSKLVGN-----GCEEQMLLVLKIACFCTLEDPNERPNSKD  335 (345)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-----~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~  335 (345)
                      .    ...+....+........+            .....+.....     ..+.....+.+++..||+.||++|||+.+
T Consensus       228 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  303 (331)
T 4aaa_A          228 D----SDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAE  303 (331)
T ss_dssp             S----SHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGG
T ss_pred             C----CcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHH
Confidence            2    222222222211111000            00000000000     01123456889999999999999999998


Q ss_pred             HHH
Q 046907          336 VRR  338 (345)
Q Consensus       336 ll~  338 (345)
                      +++
T Consensus       304 ll~  306 (331)
T 4aaa_A          304 LLH  306 (331)
T ss_dssp             GGG
T ss_pred             Hhc
Confidence            875


No 163
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=4.2e-40  Score=315.34  Aligned_cols=246  Identities=22%  Similarity=0.290  Sum_probs=192.1

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|.+.+.||+|+||.||+|+.+ .+|+.||+|.+.....                        ........+.+|+.
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~-~tg~~vAiK~l~k~~~------------------------~~~~~~~~~~~E~~  237 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMK-ATGKLYACKKLNKKRL------------------------KKRKGYQGAMVEKK  237 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEHHHH------------------------HHTTCHHHHHHHHH
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEEEhHHh------------------------hhhHHHHHHHHHHH
Confidence            3478999999999999999999964 5799999999852110                        00123567788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------LDWLARHRIALGLACGLEYLHMHHCPRIIH  192 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH  192 (345)
                      +++.++||||+++++++...+  .++++++|+.++++             +++.....++.|++.||.|||+.+   ++|
T Consensus       238 iL~~l~hp~Iv~l~~~~~~~~--~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvH  312 (543)
T 3c4z_A          238 ILAKVHSRFIVSLAYAFETKT--DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIY  312 (543)
T ss_dssp             HHHHCCCTTBCCEEEEEECSS--EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EEC
T ss_pred             HHHhcCCCCEeeEEEEEeeCC--EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---Ccc
Confidence            999999999999999988776  68999999987643             666777889999999999999999   999


Q ss_pred             cCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCc
Q 046907          193 RDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSD  271 (345)
Q Consensus       193 ~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~  271 (345)
                      |||||+|||++.++.+||+|||++........  .....+||+.|+|||++.+..++.++||| +|+++|||++|..||.
T Consensus       313 rDLKP~NILl~~~g~vkL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~  390 (543)
T 3c4z_A          313 RDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR  390 (543)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCEECCTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cCCChHHEEEeCCCCEEEeecceeeeccCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCC
Confidence            99999999999999999999999987654322  22346899999999999999999999999 9999999999999986


Q ss_pred             ccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCH-----HHHH
Q 046907          272 KFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNS-----KDVR  337 (345)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~-----~~ll  337 (345)
                      ..............+..   ....   +        ++.....+.+++..||+.||.+||++     .+|+
T Consensus       391 ~~~~~~~~~~~~~~i~~---~~~~---~--------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~  447 (543)
T 3c4z_A          391 ARGEKVENKELKQRVLE---QAVT---Y--------PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLR  447 (543)
T ss_dssp             CTTCCCCHHHHHHHHHH---CCCC---C--------CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHH
T ss_pred             CCccchhHHHHHHHHhh---cccC---C--------CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHH
Confidence            53322222233222221   1110   0        01112346788899999999999975     5555


No 164
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=9.3e-41  Score=327.10  Aligned_cols=250  Identities=19%  Similarity=0.266  Sum_probs=190.1

Q ss_pred             cCCccccc-ccccCcceeeEEEEec-CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLE-KIGSGGCGEVYKAELP-GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        47 ~~~~~~~~-~iG~G~~g~V~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      .+.+.+.. .||+|+||.||+|.+. ..+++.||||.++....+                         ....+.+.+|+
T Consensus       367 ~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~-------------------------~~~~~~~~~E~  421 (635)
T 4fl3_A          367 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-------------------------PALKDELLAEA  421 (635)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC-------------------------GGGHHHHHHHH
T ss_pred             chhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC-------------------------HHHHHHHHHHH
Confidence            33344433 7999999999999764 235789999999643222                         11256788999


Q ss_pred             HHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          125 NTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       125 ~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      .++++++|||||++++++..+.   ++++++++.++++         +++..+..++.|++.||.|||+.+   ++||||
T Consensus       422 ~il~~l~hpnIv~l~~~~~~~~---~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDL  495 (635)
T 4fl3_A          422 NVMQQLDNPYIVRMIGICEAES---WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDL  495 (635)
T ss_dssp             HHHHHCCCTTBCCEEEEEESSS---EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred             HHHHhCCCCCEeeEEEEEecCC---EEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCC
Confidence            9999999999999999987543   7789999988654         566677899999999999999998   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcc-eeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCCCCcc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTH-ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLPSDK  272 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p~~~  272 (345)
                      ||+|||++.++.+||+|||+++........ .......+|+.|+|||++.+..++.++||| ||+++|||++ |..||..
T Consensus       496 kp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~  575 (635)
T 4fl3_A          496 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG  575 (635)
T ss_dssp             SGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             ChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999999999876543221 122334568899999999998999999999 9999999998 9999644


Q ss_pred             cccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          273 FFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                          .........+........+             ..+...+.++|..||+.||++|||+.+|++.|+++.
T Consensus       576 ----~~~~~~~~~i~~~~~~~~p-------------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  630 (635)
T 4fl3_A          576 ----MKGSEVTAMLEKGERMGCP-------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  630 (635)
T ss_dssp             ----CCHHHHHHHHHTTCCCCCC-------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             ----CCHHHHHHHHHcCCCCCCC-------------CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence                2333444444333221111             122345778999999999999999999999999874


No 165
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=1.7e-40  Score=313.37  Aligned_cols=243  Identities=20%  Similarity=0.296  Sum_probs=183.3

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.. .+|..||||.+.....                        ........+.+|+.
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~------------------------~~~~~~~~~~~e~~  200 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEK-ATGRYYAMKILKKEVI------------------------VAKDEVAHTLTENR  200 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHH------------------------C-------------
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEc-CCCCEEEEEEEEhhhh------------------------hhhHHHHHHHHHHH
Confidence            4578999999999999999999854 5799999999852110                        01233566788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhh-cCCCCeEecCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHM-HHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~-~~~~~iiH~dl  195 (345)
                      +++.++||||+++++++...+  .+++++||+.++++         ++......++.|++.||.|||+ .+   ++||||
T Consensus       201 ~l~~l~h~~iv~l~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDl  275 (446)
T 4ejn_A          201 VLQNSRHPFLTALKYSFQTHD--RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDL  275 (446)
T ss_dssp             CCCCCSCTTSCCEEEEEEETT--EEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCC
T ss_pred             HHHhCCCCeEeeEEEEEeeCC--EEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCC
Confidence            999999999999999998876  68999999998754         5666778899999999999998 87   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      ||+|||++.++.+||+|||++........  ......||+.|+|||++.+..++.++||| +|+++|||++|..||..  
T Consensus       276 kp~NIll~~~~~~kl~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--  351 (446)
T 4ejn_A          276 KLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN--  351 (446)
T ss_dssp             CGGGEEECSSSCEEECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC--
T ss_pred             CHHHEEECCCCCEEEccCCCceeccCCCc--ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC--
Confidence            99999999999999999999975432221  23457899999999999999999999999 99999999999999643  


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERP-----NSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rp-----t~~~ll~  338 (345)
                        .+.......+...   ...       .+    ......+.+++..||+.||.+||     |+.++++
T Consensus       352 --~~~~~~~~~i~~~---~~~-------~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          352 --QDHEKLFELILME---EIR-------FP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             --SSHHHHHHHHHHC---CCC-------CC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             --CCHHHHHHHHHhC---CCC-------CC----ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence              2333333333221   110       00    01123477889999999999999     9999875


No 166
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=2.4e-40  Score=294.43  Aligned_cols=246  Identities=20%  Similarity=0.310  Sum_probs=176.5

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ....++|++.+.||+|+||.||+|+.. .+|+.||+|.+......                         ......+..+
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~   56 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHV-PSGQIMAVKRIRATVNS-------------------------QEQKRLLMDL   56 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEC---CH-------------------------HHHHHHHHHH
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEec-CCCeEEEEEEeecccCc-------------------------HHHHHHHHHH
Confidence            345689999999999999999999864 57999999999643221                         1123334455


Q ss_pred             HHHHhhccCCCccceeEEEecCCcceeeeeccccCCC------------CCCCHHHHHHHHHHHHHHHHHHhhc-CCCCe
Q 046907          124 INTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR------------RELDWLARHRIALGLACGLEYLHMH-HCPRI  190 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~------------~~l~~~~~~~i~~~i~~~l~~lh~~-~~~~i  190 (345)
                      ...++.++||||+++++++..++  ..++++++++++            ..+++..+..++.|++.||.|||+. +   +
T Consensus        57 ~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i  131 (290)
T 3fme_A           57 DISMRTVDCPFTVTFYGALFREG--DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---V  131 (290)
T ss_dssp             HHHHTTCCCTTBCCEEEEEECSS--SEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---C
T ss_pred             HHHHHhCCCCeEEEEeeeeeccC--CEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---e
Confidence            56678889999999999998766  578888988752            3477788889999999999999998 8   9


Q ss_pred             EecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccc----cccccCccchhh-HHHHHHHHHh
Q 046907          191 IHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYL----QMLTLTEKCDIY-FGALLAGLVM  265 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~----~~~~~~~~~Dvw-lG~vl~el~t  265 (345)
                      +||||||+||+++.++.+||+|||++........   .....||+.|+|||.+    .+..++.++||| +|+++|+|++
T Consensus       132 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~  208 (290)
T 3fme_A          132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAI  208 (290)
T ss_dssp             CCCCCSGGGCEECTTCCEEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEECCCCCEEEeecCCccccccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999976544322   2335789999999996    455688999999 9999999999


Q ss_pred             CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          266 GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       266 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      |..||.....  .......    ......+..      ...   .....+.+++..||+.||++|||+.++++
T Consensus       209 g~~p~~~~~~--~~~~~~~----~~~~~~~~~------~~~---~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          209 LRFPYDSWGT--PFQQLKQ----VVEEPSPQL------PAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             TSCSSCCCSC--HHHHHHH----HHHSCCCCC------CTT---TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCccccCc--hHHHHHH----HhccCCCCc------ccc---cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            9999753211  1111111    111111110      001   11234778899999999999999999976


No 167
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.3e-40  Score=317.56  Aligned_cols=243  Identities=25%  Similarity=0.361  Sum_probs=189.4

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.+ .++..||||.+......                         ......+.+|+.+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~E~~~   74 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDR-ITQQEYAVKVINKASAK-------------------------NKDTSTILREVEL   74 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEET-TTCCEEEEEEEEHHHHB-------------------------CSCHHHHHHHHHH
T ss_pred             hcceEEeEEEeecCCEEEEEEEEC-CCCCEEEEEEEeccccc-------------------------chHHHHHHHHHHH
Confidence            358999999999999999999864 57999999998521110                         1125667899999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++..++  .++++++++.++.+         ++...+..++.|++.||.|||+.+   ++||||||
T Consensus        75 l~~l~hpniv~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp  149 (486)
T 3mwu_A           75 LKKLDHPNIMKLFEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKP  149 (486)
T ss_dssp             HHHCCCTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSG
T ss_pred             HHhCCCCCcCeEEEEEEcCC--EEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCch
Confidence            99999999999999998766  78999999988754         566677889999999999999999   99999999


Q ss_pred             CCeeec---CCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          198 VNVLLD---DDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       198 ~nil~~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      +|||++   .++.+||+|||++.......   ......||+.|+|||++.+ .++.++||| +|+++|+|++|..||.. 
T Consensus       150 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~-  224 (486)
T 3mwu_A          150 ENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG-  224 (486)
T ss_dssp             GGEEESSSSTTCCEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC-
T ss_pred             HHEEEecCCCCCCEEEEECCcCeECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC-
Confidence            999995   45679999999997654432   2344679999999999986 589999999 99999999999999643 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         .........+..........          ........+.+++..||+.||.+|||+.++++
T Consensus       225 ---~~~~~~~~~i~~~~~~~~~~----------~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          225 ---KNEYDILKRVETGKYAFDLP----------QWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             ---SSHHHHHHHHHHTCCCSCSG----------GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ---CCHHHHHHHHHhCCCCCCCc----------ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence               23334433333322111110          01112234778999999999999999999986


No 168
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=1.6e-40  Score=305.88  Aligned_cols=240  Identities=26%  Similarity=0.324  Sum_probs=180.4

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.+ .++..||+|.+.......                        ......+..|..
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~AiK~~~~~~~~~------------------------~~~~~~~~~e~~   90 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHK-AEEVFYAVKVLQKKAILK------------------------KKEEKHIMSERN   90 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEET-TTCCEEEEEEEEGGGBC-------------------------------------
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEc-CCCCEEEEEEEEHHHhhh------------------------hHHHHHHHHHHH
Confidence            5578999999999999999999964 578999999996432211                        122445566777


Q ss_pred             H-HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 T-VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~-l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      + ++.++||||+++++++...+  .+++++||+.++.+         ++......++.|++.||.|||+.+   ++||||
T Consensus        91 ~ll~~~~hp~Iv~l~~~~~~~~--~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDl  165 (373)
T 2r5t_A           91 VLLKNVKHPFLVGLHFSFQTAD--KLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN---IVYRDL  165 (373)
T ss_dssp             CCBCCCCCTTBCCEEEEEECSS--EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCC
T ss_pred             HHHHhCCCCCCCCEEEEEEeCC--EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCC
Confidence            6 46789999999999998776  78999999998765         455566779999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      ||+|||++.++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|+| +|+++|||++|..||..  
T Consensus       166 kp~NIll~~~g~ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--  241 (373)
T 2r5t_A          166 KPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS--  241 (373)
T ss_dssp             CGGGEEECTTSCEEECCCCBCGGGBCCCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC--
T ss_pred             CHHHEEECCCCCEEEeeCccccccccCCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC--
Confidence            99999999999999999999975432211  23457899999999999999999999999 99999999999999743  


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKD  335 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~  335 (345)
                        .+.......+..   ....   +.    ..    ....+.+++..||+.||.+||++.+
T Consensus       242 --~~~~~~~~~i~~---~~~~---~~----~~----~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          242 --RNTAEMYDNILN---KPLQ---LK----PN----ITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             --SBHHHHHHHHHH---SCCC---CC----SS----SCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             --CCHHHHHHHHHh---cccC---CC----CC----CCHHHHHHHHHHcccCHHhCCCCCC
Confidence              233333332222   1110   00    11    1234778889999999999999853


No 169
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=6.5e-41  Score=305.31  Aligned_cols=242  Identities=21%  Similarity=0.294  Sum_probs=186.6

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.+ .+|+.||+|.+.....                               ...+|+.+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~-------------------------------~~~~E~~~   68 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHK-ATNMEFAVKIIDKSKR-------------------------------DPTEEIEI   68 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEETTTC-------------------------------CCHHHHHH
T ss_pred             cccEEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEcccC-------------------------------ChHHHHHH
Confidence            468999999999999999999864 5799999999964321                               12357788


Q ss_pred             Hhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          127 VGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       127 l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +.++ +||||+++++++..++  .+++++|++.++++         +++.....++.|++.||.|||+.+   ++|||||
T Consensus        69 l~~~~~hp~iv~~~~~~~~~~--~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlk  143 (342)
T 2qr7_A           69 LLRYGQHPNIITLKDVYDDGK--YVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLK  143 (342)
T ss_dssp             HHHHTTSTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCC
T ss_pred             HHHhcCCCCcCeEEEEEEcCC--EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCC
Confidence            8777 7999999999998765  78999999988654         566777899999999999999999   9999999


Q ss_pred             CCCeeecCC----CCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCc
Q 046907          197 PVNVLLDDD----IEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSD  271 (345)
Q Consensus       197 ~~nil~~~~----~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~  271 (345)
                      |+||++...    +.+||+|||++........  ......||+.|+|||++.+..++.++||| +|+++|+|++|..||.
T Consensus       144 p~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  221 (342)
T 2qr7_A          144 PSNILYVDESGNPESIRICDFGFAKQLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFA  221 (342)
T ss_dssp             GGGEEESSSSCSGGGEEECCCTTCEECBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             HHHEEEecCCCCcCeEEEEECCCcccCcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCC
Confidence            999998532    3599999999987644322  23456889999999999988899999999 9999999999999975


Q ss_pred             ccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          272 KFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .... .........+....   ...       ...........+.+++..||+.||++|||+.++++
T Consensus       222 ~~~~-~~~~~~~~~i~~~~---~~~-------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          222 NGPD-DTPEEILARIGSGK---FSL-------SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             SSTT-SCHHHHHHHHHHCC---CCC-------CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCc-CCHHHHHHHHccCC---ccc-------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            4211 22223333332211   110       00111122345778899999999999999999875


No 170
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=9.2e-40  Score=292.83  Aligned_cols=247  Identities=20%  Similarity=0.257  Sum_probs=190.6

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.. .++..||+|.+......                       ........+.+|+.+
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~-----------------------~~~~~~~~~~~E~~~   59 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDS-ETLCRRAVKILKKKKLR-----------------------RIPNGEANVKKEIQL   59 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBT-TTCCEEEEEEECHHHHH-----------------------HSTTHHHHHHHHHHH
T ss_pred             ccceeEeeEEecCCCeEEEEEEEC-CCCcEEEEEEecccccc-----------------------ccchhHHHHHHHHHH
Confidence            368999999999999999999854 57899999998521100                       001235678899999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      ++.++||||+++++++..++...+++++|++.++          ..+++.....++.|++.||.|||+.+   ++|||||
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlk  136 (305)
T 2wtk_C           60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIK  136 (305)
T ss_dssp             HTTCCCTTBCCEEEEEECC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCS
T ss_pred             HHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCC
Confidence            9999999999999998766656789999998764          34677788899999999999999998   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccc--cCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT--LTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~--~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      |+||+++.++.++|+|||++................||..|+|||.+.+..  .+.++||| +|+++|+|++|..||.. 
T Consensus       137 p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~-  215 (305)
T 2wtk_C          137 PGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG-  215 (305)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred             cccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC-
Confidence            999999999999999999998765433333334567999999999998654  47799999 99999999999999753 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         .........+....   ..       ..    ......+.+++.+||+.||.+|||+.++++
T Consensus       216 ---~~~~~~~~~i~~~~---~~-------~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          216 ---DNIYKLFENIGKGS---YA-------IP----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             ---SSHHHHHHHHHHCC---CC-------CC----SSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ---chHHHHHHHHhcCC---CC-------CC----CccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence               22233333222211   10       00    111234778899999999999999999986


No 171
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=8.9e-40  Score=300.48  Aligned_cols=259  Identities=22%  Similarity=0.284  Sum_probs=193.8

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.. .++..||||.+.....                          ......+.+|+.
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~--------------------------~~~~~~~~~E~~   77 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDN-LNKVRVAIKKISPFEH--------------------------QTYCQRTLREIK   77 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCTTC--------------------------HHHHHHHHHHHH
T ss_pred             ccccEEEEEEeecCCCeEEEEEEEC-CCCeEEEEEEeccccC--------------------------cHHHHHHHHHHH
Confidence            4569999999999999999999854 5789999999964221                          123567889999


Q ss_pred             HHhhccCCCccceeEEEecCC---cceeeeeccccCCC-------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPD---CHLLYILNDVSQGR-------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~---~~~l~~~~~~~~~~-------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      ++++++||||+++++++..++   ...++++++++.+.       ..++...+..++.|++.||.|||+.+   ++||||
T Consensus        78 ~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Di  154 (364)
T 3qyz_A           78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDL  154 (364)
T ss_dssp             HHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCC
T ss_pred             HHHhcCCCCCccceeEEecCCccccceEEEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCC
Confidence            999999999999999987653   23578899998752       23677788899999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcce-eccCcccCcccccccccccc-ccCccchhh-HHHHHHHHHhCCCCCcc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHI-TTSNVVGTVEYIAPEYLQML-TLTEKCDIY-FGALLAGLVMGKLPSDK  272 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~gt~~~~aPE~~~~~-~~~~~~Dvw-lG~vl~el~tg~~p~~~  272 (345)
                      ||+||+++.++.+||+|||++.......... ......||+.|+|||++.+. .++.++||| +|+++|+|++|..||..
T Consensus       155 kp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  234 (364)
T 3qyz_A          155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG  234 (364)
T ss_dssp             CGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCC
Confidence            9999999999999999999998764332211 12446899999999987654 489999999 99999999999999654


Q ss_pred             cccccchhhHHHHHHHHhhhcCCCcc--------------cc-cc-c-cCCCcHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 046907          273 FFQHTNEMSFVKWMRNVMASENPKRA--------------ID-SK-L-VGNGCEEQMLLVLKIACFCTLEDPNERPNSKD  335 (345)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-~~-~-~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~  335 (345)
                      .    ...+....+......+.....              .. .. . .....+.....+.+++.+||+.||++|||+.+
T Consensus       235 ~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  310 (364)
T 3qyz_A          235 K----HYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ  310 (364)
T ss_dssp             S----SGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             C----ChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence            2    333333333332222111000              00 00 0 00000112345788999999999999999999


Q ss_pred             HHH
Q 046907          336 VRR  338 (345)
Q Consensus       336 ll~  338 (345)
                      +++
T Consensus       311 ~l~  313 (364)
T 3qyz_A          311 ALA  313 (364)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            985


No 172
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=9e-41  Score=303.66  Aligned_cols=242  Identities=19%  Similarity=0.270  Sum_probs=188.9

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++.+.||+|+||.||+|+.. .+++.||||.+............                   ......+.+|+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~~~~~-------------------~~~~~~~~~E~~   81 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDK-EKNKEVVVKFIKKEKVLEDCWIE-------------------DPKLGKVTLEIA   81 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEET-TTTEEEEEEEEESTTSCTTSEEE-------------------ETTTEEEEHHHH
T ss_pred             cccceEEEeEEEecCCEEEEEEEEC-CCCcEEEEEEEehhhcccccccc-------------------hHHHHHHHHHHH
Confidence            3468999999999999999999854 57999999999765322110000                   001334567999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCC-C---------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR-R---------ELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~-~---------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++.++||||+++++++...+  .++++++++.++ .         .+++..+..++.|++.||.|||+.+   ++||||
T Consensus        82 ~l~~l~h~~Iv~~~~~~~~~~--~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dl  156 (335)
T 3dls_A           82 ILSRVEHANIIKVLDIFENQG--FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDI  156 (335)
T ss_dssp             HHTTCCCTTBCCEEEEEECSS--EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred             HHHhCCCCCEeeEEEEEeeCC--EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEecc
Confidence            999999999999999998766  678888887654 2         4677788899999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc-Cccchhh-HHHHHHHHHhCCCCCccc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL-TEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~-~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      ||+||+++.++.+||+|||++........   .....||+.|+|||.+.+..+ +.++||| +|+++|+|++|..||...
T Consensus       157 kp~NIll~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  233 (335)
T 3dls_A          157 KDENIVIAEDFTIKLIDFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCEL  233 (335)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSG
T ss_pred             CHHHEEEcCCCcEEEeecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhH
Confidence            99999999999999999999987654432   234678999999999998876 7899999 999999999999997542


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRM  339 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~  339 (345)
                      ...             ......        .+..   ....+.+++..||+.||++|||+.++++.
T Consensus       234 ~~~-------------~~~~~~--------~~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          234 EET-------------VEAAIH--------PPYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             GGG-------------TTTCCC--------CSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             HHH-------------HhhccC--------CCcc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            110             000000        0001   12347788899999999999999999873


No 173
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=5.5e-40  Score=308.14  Aligned_cols=250  Identities=21%  Similarity=0.231  Sum_probs=188.7

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.. .+++.||||.+....                            .....+.+|+.
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~-~~~~~vAvK~~~~~~----------------------------~~~~~~~~E~~  145 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDH-KVHQHVALKMVRNEK----------------------------RFHRQAAEEIR  145 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEET-TTTEEEEEEEECSCH----------------------------HHHHHHHHHHH
T ss_pred             ccCcEEEEEEcccCccEEEEEEEEC-CCCcEEEEEEECCcc----------------------------chHHHHHHHHH
Confidence            3457999999999999999999854 579999999996531                            12345556777


Q ss_pred             HHhhc------cCCCccceeEEEecCCcceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 046907          126 TVGQI------RHRNLHPLLAHVTRPDCHLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHMHHCPR  189 (345)
Q Consensus       126 ~l~~l------~hpniv~l~~~~~~~~~~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~  189 (345)
                      +++.+      +|+||+++++++...+  .++++++++.+.          ..+++..+..++.|++.||.|||+.+   
T Consensus       146 ~l~~l~~~~~~~~~~iv~~~~~~~~~~--~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---  220 (429)
T 3kvw_A          146 ILEHLRKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---  220 (429)
T ss_dssp             HHHHHHTTCTTSCSCBCCEEEEEEETT--EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHhhccccCCcCEEEEEeecccCC--eEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            77666      6789999999998776  688899998652          22677788899999999999999998   


Q ss_pred             eEecCCCCCCeeecCCCC--eEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhC
Q 046907          190 IIHRDLNPVNVLLDDDIE--ARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMG  266 (345)
Q Consensus       190 iiH~dlk~~nil~~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg  266 (345)
                      ++||||||+|||++.++.  +||+|||++......     .....||+.|+|||++.+..++.++||| +|+++|||++|
T Consensus       221 ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG  295 (429)
T 3kvw_A          221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG  295 (429)
T ss_dssp             EECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHS
T ss_pred             eecCCCCHHHeEEccCCCcceEEeecccceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhC
Confidence            999999999999998877  999999999765432     2346889999999999999999999999 99999999999


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCc---------cccc---------------------------c----ccCC
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKR---------AIDS---------------------------K----LVGN  306 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~---------------------------~----~~~~  306 (345)
                      ..||..    .+..+....+......+....         .++.                           +    ....
T Consensus       296 ~~pf~~----~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (429)
T 3kvw_A          296 YPLLPG----EDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESR  371 (429)
T ss_dssp             SCSSCC----SSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCS
T ss_pred             CCCCCC----CCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccch
Confidence            999643    233344443333322111000         0000                           0    0000


Q ss_pred             CcH-----HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          307 GCE-----EQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       307 ~~~-----~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ...     .....+.+++..||+.||++|||+.++++
T Consensus       372 ~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~  408 (429)
T 3kvw_A          372 EWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR  408 (429)
T ss_dssp             CHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence            000     11345788999999999999999999986


No 174
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=6.9e-40  Score=299.08  Aligned_cols=271  Identities=15%  Similarity=0.193  Sum_probs=192.9

Q ss_pred             hcCCcccccccccCcceeeEEEEecC--CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPG--QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ..++|++.+.||+|+||.||+|++..  .++..+|+|.+........   .+             ...........+.+|
T Consensus        35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~---~e-------------~~~~~~~~~~~~~~e   98 (345)
T 2v62_A           35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLF---SE-------------LKFYQRVAKKDCIKK   98 (345)
T ss_dssp             TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHH---HH-------------HHHHHHHCCHHHHHH
T ss_pred             cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchH---HH-------------HHHHHHHhhhHHHHH
Confidence            46799999999999999999999752  2678999999875432211   00             001112224557789


Q ss_pred             HHHHhhccCCCccceeEEEecC--CcceeeeeccccCCCC---------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 046907          124 INTVGQIRHRNLHPLLAHVTRP--DCHLLYILNDVSQGRR---------ELDWLARHRIALGLACGLEYLHMHHCPRIIH  192 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~--~~~~l~~~~~~~~~~~---------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH  192 (345)
                      +..++.++||||+++++++...  +...++++++++ +++         .+++..+..++.|++.||.|||+.+   ++|
T Consensus        99 ~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH  174 (345)
T 2v62_A           99 WIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENE---YVH  174 (345)
T ss_dssp             HHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTT---EEC
T ss_pred             HHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeC
Confidence            9999999999999999998772  245789999998 533         4688889999999999999999998   999


Q ss_pred             cCCCCCCeeecCCC--CeEEeccccceecCCCCcc-----eeccCcccCccccccccccccccCccchhh-HHHHHHHHH
Q 046907          193 RDLNPVNVLLDDDI--EARISGFGFARAIPDAHTH-----ITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLV  264 (345)
Q Consensus       193 ~dlk~~nil~~~~~--~~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~  264 (345)
                      |||||+||+++.++  .+||+|||+++........     .......||..|+|||.+.+..++.++||| +|+++|||+
T Consensus       175 ~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell  254 (345)
T 2v62_A          175 GDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWL  254 (345)
T ss_dssp             SCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred             CCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHH
Confidence            99999999999777  9999999999876432111     112446899999999999998899999999 999999999


Q ss_pred             hCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 046907          265 MGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQI  343 (345)
Q Consensus       265 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l  343 (345)
                      +|..||.....  ..... ...........+... .......   .....+.+++..||+.||++|||+.+|++.|+++
T Consensus       255 ~g~~pf~~~~~--~~~~~-~~~~~~~~~~~~~~~-~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          255 CGKLPWEQNLK--DPVAV-QTAKTNLLDELPQSV-LKWAPSG---SSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             HSSCTTGGGTT--CHHHH-HHHHHHHHHTTTHHH-HHHSCTT---SCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             hCCCCcccccc--ccHHH-HHHHHhhcccccHHH-Hhhcccc---ccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence            99999854222  11112 222222222221110 0000000   1223477888899999999999999999999876


No 175
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=2.3e-40  Score=298.49  Aligned_cols=255  Identities=22%  Similarity=0.305  Sum_probs=193.5

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ..+.++|++.+.||+|+||.||+|+.. .+++.||||.+....                           ......+.+|
T Consensus        25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------------------~~~~~~~~~E   76 (317)
T 2buj_A           25 IIDNKHYLFIQKLGEGGFSYVDLVEGL-HDGHFYALKRILCHE---------------------------QQDREEAQRE   76 (317)
T ss_dssp             EETTEEEEEEEEEEC--CEEEEEEEET-TTCCEEEEEEEEESS---------------------------HHHHHHHHHH
T ss_pred             EECCeEEEEEEEecCCCCeEEEEEEec-CCCcEEEEEEEecCC---------------------------HHHHHHHHHH
Confidence            456789999999999999999999854 579999999885422                           2235677899


Q ss_pred             HHHHhhccCCCccceeEEEecC--CcceeeeeccccCCCCC-------------CCHHHHHHHHHHHHHHHHHHhhcCCC
Q 046907          124 INTVGQIRHRNLHPLLAHVTRP--DCHLLYILNDVSQGRRE-------------LDWLARHRIALGLACGLEYLHMHHCP  188 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~--~~~~l~~~~~~~~~~~~-------------l~~~~~~~i~~~i~~~l~~lh~~~~~  188 (345)
                      +.+++.++||||+++++++...  .....+++++++.++++             +++..+..++.|++.||.|||+.+  
T Consensus        77 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--  154 (317)
T 2buj_A           77 ADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--  154 (317)
T ss_dssp             HHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            9999999999999999988642  33468899999988543             667777889999999999999998  


Q ss_pred             CeEecCCCCCCeeecCCCCeEEeccccceecCCCCcc-------eeccCcccCccccccccccccc---cCccchhh-HH
Q 046907          189 RIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTH-------ITTSNVVGTVEYIAPEYLQMLT---LTEKCDIY-FG  257 (345)
Q Consensus       189 ~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~-------~~~~~~~gt~~~~aPE~~~~~~---~~~~~Dvw-lG  257 (345)
                       ++||||||+||+++.++.++|+|||++.........       .......||+.|+|||.+.+..   ++.++||| +|
T Consensus       155 -ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG  233 (317)
T 2buj_A          155 -YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLG  233 (317)
T ss_dssp             -EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHH
T ss_pred             -cccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHH
Confidence             999999999999999999999999988754321100       0112346799999999997654   68899999 99


Q ss_pred             HHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 046907          258 ALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVR  337 (345)
Q Consensus       258 ~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll  337 (345)
                      +++|+|++|..||........  .....+......+             ..+.....+.+++..||+.||.+|||+.+++
T Consensus       234 ~il~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~~-------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  298 (317)
T 2buj_A          234 CVLYAMMFGEGPYDMVFQKGD--SVALAVQNQLSIP-------------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLL  298 (317)
T ss_dssp             HHHHHHHHSSCTTHHHHHTTS--CHHHHHHCC--CC-------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHhCCCChhhhhcccc--hhhHHhhccCCCC-------------ccccCCHHHHHHHHHHhhcChhhCCCHHHHH
Confidence            999999999999854322111  1111111111000             0111223478899999999999999999999


Q ss_pred             HHHhhhh
Q 046907          338 RMLSQIQ  344 (345)
Q Consensus       338 ~~L~~l~  344 (345)
                      +.|++++
T Consensus       299 ~~L~~~~  305 (317)
T 2buj_A          299 SQLEALQ  305 (317)
T ss_dssp             HHHHHTC
T ss_pred             HHhhhcC
Confidence            9999875


No 176
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=2e-40  Score=304.91  Aligned_cols=255  Identities=22%  Similarity=0.329  Sum_probs=179.2

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|+.. .+|..||||.+.....+                         .....++.+|+.
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~~E~~   80 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDT-KTGLRVAVKKLSRPFQS-------------------------IIHAKRTYRELR   80 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEET-TTTEEEEEEECSSTTSS-------------------------HHHHHHHHHHHH
T ss_pred             CCCceEEeeEEeecCCeEEEEEEEC-CCCCEEEEEEeCccccC-------------------------HHHHHHHHHHHH
Confidence            3479999999999999999999854 57999999998653222                         223567789999


Q ss_pred             HHhhccCCCccceeEEEecCC----cceeeeeccccCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPD----CHLLYILNDVSQG-------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~----~~~l~~~~~~~~~-------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      +++.++||||+++++++....    ...++++++++.+       ...++...+..++.|++.||.|||+.+   ++|||
T Consensus        81 ~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~D  157 (367)
T 2fst_X           81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRD  157 (367)
T ss_dssp             HHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCC
T ss_pred             HHHhCCCCCCCcEEEEEecCCccccCCeEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCC
Confidence            999999999999999987542    2346788888743       124677788899999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-cccCccchhh-HHHHHHHHHhCCCCCcc
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGALLAGLVMGKLPSDK  272 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~vl~el~tg~~p~~~  272 (345)
                      |||+||+++.++.+||+|||+++.....     .....||+.|+|||.+.+ ..++.++||| +|+++|||++|..||.+
T Consensus       158 lkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  232 (367)
T 2fst_X          158 LKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG  232 (367)
T ss_dssp             CCGGGEEECTTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCHhhEEECCCCCEEEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999999765432     234688999999999987 5689999999 99999999999999654


Q ss_pred             cccccchhhHHHHHHHHhhhcCCCcc---cc----------ccccCCC----cHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 046907          273 FFQHTNEMSFVKWMRNVMASENPKRA---ID----------SKLVGNG----CEEQMLLVLKIACFCTLEDPNERPNSKD  335 (345)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----------~~~~~~~----~~~~~~~l~~li~~Cl~~dp~~Rpt~~~  335 (345)
                          .+.......+......+.....   ..          +......    .+.....+.+|+.+||+.||++|||+.+
T Consensus       233 ----~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e  308 (367)
T 2fst_X          233 ----TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ  308 (367)
T ss_dssp             ----SSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             ----CCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHH
Confidence                3334444444433322211000   00          0000000    0112345788999999999999999999


Q ss_pred             HHH
Q 046907          336 VRR  338 (345)
Q Consensus       336 ll~  338 (345)
                      +++
T Consensus       309 ~L~  311 (367)
T 2fst_X          309 ALA  311 (367)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            985


No 177
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=6.6e-40  Score=290.55  Aligned_cols=238  Identities=22%  Similarity=0.364  Sum_probs=190.0

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|++. .+++.||+|.+....                               ..+.+|+.+
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~-------------------------------~~~~~e~~~   57 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHR-IDGKTYVIKRVKYNN-------------------------------EKAEREVKA   57 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEET-TTCCEEEEEEEECCS-------------------------------GGGHHHHHH
T ss_pred             ccccceeeeeccCCceEEEEEEEc-CCCeEEEEEEecccc-------------------------------HHHHHHHHH
Confidence            457999999999999999999864 578999999996432                               234579999


Q ss_pred             HhhccCCCccceeEEEec--------------CCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHH
Q 046907          127 VGQIRHRNLHPLLAHVTR--------------PDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEY  181 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~--------------~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~  181 (345)
                      ++.++||||+++++++..              .....+++++++++++++           +++.....++.|++.||.|
T Consensus        58 l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~  137 (284)
T 2a19_B           58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDY  137 (284)
T ss_dssp             HHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999998764              123457899999988543           5666778899999999999


Q ss_pred             HhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHH
Q 046907          182 LHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALL  260 (345)
Q Consensus       182 lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl  260 (345)
                      ||+.+   ++|+||||+||+++.++.+||+|||++........   .....||+.|+|||.+.+..++.++||| +|+++
T Consensus       138 lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  211 (284)
T 2a19_B          138 IHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLIL  211 (284)
T ss_dssp             HHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHH
T ss_pred             HHhCC---eeeccCCHHHEEEcCCCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHH
Confidence            99998   99999999999999999999999999987654332   2345789999999999998899999999 99999


Q ss_pred             HHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 046907          261 AGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRML  340 (345)
Q Consensus       261 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L  340 (345)
                      |+|++|..|+..      ....   ..... ......         ..   ...+.+++.+||+.||.+|||+.++++.|
T Consensus       212 ~~l~~~~~~~~~------~~~~---~~~~~-~~~~~~---------~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l  269 (284)
T 2a19_B          212 AELLHVCDTAFE------TSKF---FTDLR-DGIISD---------IF---DKKEKTLLQKLLSKKPEDRPNTSEILRTL  269 (284)
T ss_dssp             HHHHSCCSSHHH------HHHH---HHHHH-TTCCCT---------TS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHhcCCcchh------HHHH---HHHhh-cccccc---------cC---CHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            999999988421      1111   11111 111111         11   12367888999999999999999999999


Q ss_pred             hhhh
Q 046907          341 SQIQ  344 (345)
Q Consensus       341 ~~l~  344 (345)
                      +.+.
T Consensus       270 ~~~~  273 (284)
T 2a19_B          270 TVWK  273 (284)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            9875


No 178
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=2.3e-40  Score=305.23  Aligned_cols=250  Identities=11%  Similarity=0.053  Sum_probs=173.1

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ...+|++.+.||+|+||.||+|++. .+|+.||||.+.......                        ......+.+|+.
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~------------------------~~~~~~~~~E~~  114 (371)
T 3q60_A           60 GERKLKLVEPLRVGDRSVVFLVRDV-ERLEDFALKVFTMGAENS------------------------RSELERLHEATF  114 (371)
T ss_dssp             CEEEEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEECCSTTH------------------------HHHHHHHHHHHH
T ss_pred             CceeeeeeeeccCCCCEEEEEEEEC-CCCceeEEEEEEeccccc------------------------ccHHHHHHHHHH
Confidence            3446999999999999999999964 579999999998754321                        223556677755


Q ss_pred             HHhhc--cCCCcccee-------EEEecCCc---------------ceeeeeccccCCCCCCCHHH----------H---
Q 046907          126 TVGQI--RHRNLHPLL-------AHVTRPDC---------------HLLYILNDVSQGRRELDWLA----------R---  168 (345)
Q Consensus       126 ~l~~l--~hpniv~l~-------~~~~~~~~---------------~~l~~~~~~~~~~~~l~~~~----------~---  168 (345)
                      +++.+  +||||++++       +++..++.               ..+++++||++ +++.++..          +   
T Consensus       115 ~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~  193 (371)
T 3q60_A          115 AAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGI  193 (371)
T ss_dssp             HHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHH
T ss_pred             HHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhh
Confidence            55555  699988755       44443332               34789999998 55544443          2   


Q ss_pred             ---HHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc
Q 046907          169 ---HRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM  245 (345)
Q Consensus       169 ---~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~  245 (345)
                         ..++.|++.||.|||+.+   ++||||||+|||++.++.+||+|||++...+..     .....+|+.|+|||.+.+
T Consensus       194 ~vk~~i~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~  265 (371)
T 3q60_A          194 LALHILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNA  265 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTC
T ss_pred             hhHHHHHHHHHHHHHHHHHCC---CccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccC
Confidence               467799999999999999   999999999999999999999999999876432     113567799999999987


Q ss_pred             --cccCccchhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhc
Q 046907          246 --LTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFC  322 (345)
Q Consensus       246 --~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~C  322 (345)
                        ..++.++||| +|+++|||++|..||..........         ...................+.....+.++|.+|
T Consensus       266 ~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  336 (371)
T 3q60_A          266 STATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS---------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRF  336 (371)
T ss_dssp             SEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC---------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHH
T ss_pred             CCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccc---------hhhhhhhhccccccchhhccCCCHHHHHHHHHH
Confidence              6799999999 9999999999999986543211000         000000000000111111122334577899999


Q ss_pred             cCCCCCCCCCHHHHHH
Q 046907          323 TLEDPNERPNSKDVRR  338 (345)
Q Consensus       323 l~~dp~~Rpt~~~ll~  338 (345)
                      |+.||++|||+.++++
T Consensus       337 L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          337 LNFDRRRRLLPLEAME  352 (371)
T ss_dssp             TCSSTTTCCCHHHHTT
T ss_pred             cCCChhhCCCHHHHhc
Confidence            9999999999999874


No 179
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=1.2e-39  Score=302.41  Aligned_cols=255  Identities=18%  Similarity=0.210  Sum_probs=194.9

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.. .+++.||||.+...                            ......+.+|+.+
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~----------------------------~~~~~~~~~E~~~   86 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDI-QGKKFVAMKVVKSA----------------------------EHYTETALDEIRL   86 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSC----------------------------HHHHHHHHHHHHH
T ss_pred             CCeEEEEEEeeecCCeeEEEEEec-CCCeEEEEEEEecC----------------------------CcchHHHHHHHHH
Confidence            368999999999999999999854 57999999999643                            1224567789999


Q ss_pred             Hhhcc--------CCCccceeEEEecC--CcceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhhc-
Q 046907          127 VGQIR--------HRNLHPLLAHVTRP--DCHLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHMH-  185 (345)
Q Consensus       127 l~~l~--------hpniv~l~~~~~~~--~~~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~-  185 (345)
                      ++.++        ||||+++++++...  +...++++++++.++          ..+++..+..++.|++.||.|||++ 
T Consensus        87 l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~  166 (397)
T 1wak_A           87 LKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC  166 (397)
T ss_dssp             HHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            98885        88899999988732  345789999999652          2377888899999999999999998 


Q ss_pred             CCCCeEecCCCCCCeeecCCC-------------------------------------------------CeEEeccccc
Q 046907          186 HCPRIIHRDLNPVNVLLDDDI-------------------------------------------------EARISGFGFA  216 (345)
Q Consensus       186 ~~~~iiH~dlk~~nil~~~~~-------------------------------------------------~~kl~Dfg~a  216 (345)
                      +   ++||||||+|||++.++                                                 .+||+|||++
T Consensus       167 g---ivHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a  243 (397)
T 1wak_A          167 R---IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNA  243 (397)
T ss_dssp             C---EECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGC
T ss_pred             C---EecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccc
Confidence            8   99999999999998765                                                 7999999999


Q ss_pred             eecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccccc--hhhHHHHHHHHhhhc
Q 046907          217 RAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTN--EMSFVKWMRNVMASE  293 (345)
Q Consensus       217 ~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~  293 (345)
                      ......     .....||+.|+|||++.+..++.++||| +|+++|||++|..||........  .......+.......
T Consensus       244 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  318 (397)
T 1wak_A          244 CWVHKH-----FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKV  318 (397)
T ss_dssp             EETTBC-----SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSC
T ss_pred             cccccc-----CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCC
Confidence            876432     2346789999999999999999999999 99999999999999865433221  222223333222211


Q ss_pred             CCCc---------cccc--------c-----------ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          294 NPKR---------AIDS--------K-----------LVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       294 ~~~~---------~~~~--------~-----------~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ....         .+..        .           ............+.+|+.+||+.||++|||+.++++
T Consensus       319 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          319 PRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             ChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            1000         0000        0           001234566778999999999999999999999985


No 180
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.1e-39  Score=290.46  Aligned_cols=247  Identities=19%  Similarity=0.305  Sum_probs=189.4

Q ss_pred             hhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      .+...|.+.+.||+|+||.||+|.+. .++..||+|.+.....+                         ....+.+.+|+
T Consensus        23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~va~k~~~~~~~~-------------------------~~~~~~~~~e~   76 (290)
T 1t4h_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRKLT-------------------------KSERQRFKEEA   76 (290)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSC-------------------------HHHHHHHHHHH
T ss_pred             cCceeEEeeeeccCCCCeEEEEeEec-CCceEEEEEEecchhhC-------------------------HHHHHHHHHHH
Confidence            35566899999999999999999864 57899999998643222                         23366788999


Q ss_pred             HHHhhccCCCccceeEEEecC--CcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 046907          125 NTVGQIRHRNLHPLLAHVTRP--DCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHR  193 (345)
Q Consensus       125 ~~l~~l~hpniv~l~~~~~~~--~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~  193 (345)
                      .+++.++||||+++++++...  +...+++++++++++++         ++......++.|++.||.|||+.+ .+++|+
T Consensus        77 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~  155 (290)
T 1t4h_A           77 EMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHR  155 (290)
T ss_dssp             HHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCS
T ss_pred             HHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEEC
Confidence            999999999999999988653  34578999999988654         566667789999999999999985 349999


Q ss_pred             CCCCCCeeec-CCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCc
Q 046907          194 DLNPVNVLLD-DDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSD  271 (345)
Q Consensus       194 dlk~~nil~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~  271 (345)
                      ||||+||+++ .++.+||+|||++.......    .....||+.|+|||.+.+ .++.++||| +|+++|+|++|..||.
T Consensus       156 dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~  230 (290)
T 1t4h_A          156 DLKCDNIFITGPTGSVKIGDLGLATLKRASF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS  230 (290)
T ss_dssp             CCCGGGEEESSTTSCEEECCTTGGGGCCTTS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             CCCHHHEEEECCCCCEEEeeCCCcccccccc----cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCC
Confidence            9999999998 78899999999997544332    233578999999998875 589999999 9999999999999975


Q ss_pred             ccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          272 KFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ...   ........+   .....+ ...+.    .    ....+.+++..||+.||.+|||+.++++
T Consensus       231 ~~~---~~~~~~~~~---~~~~~~-~~~~~----~----~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          231 ECQ---NAAQIYRRV---TSGVKP-ASFDK----V----AIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             TCS---SHHHHHHHH---TTTCCC-GGGGG----C----CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CcC---cHHHHHHHH---hccCCc-cccCC----C----CCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            422   222222222   111111 11111    1    1124788999999999999999999986


No 181
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=4e-40  Score=298.33  Aligned_cols=247  Identities=23%  Similarity=0.323  Sum_probs=190.1

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCce--eEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRM--ISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~--vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      +.++|++.+.||+|+||.||+|++. .++..  +|+|.+.....                          ......+.+|
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~~v~iK~~~~~~~--------------------------~~~~~~~~~E   75 (327)
T 1fvr_A           23 DWNDIKFQDVIGEGNFGQVLKARIK-KDGLRMDAAIKRMKEYAS--------------------------KDDHRDFAGE   75 (327)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEE-ETTEEEEEEEEEEECC--------------------------------CHHHHH
T ss_pred             cHHHccceeeeecCCCceEEEEEEc-cCCcccceeeeeeccccc--------------------------hHHHHHHHHH
Confidence            5679999999999999999999865 35654  49999864211                          1235667889


Q ss_pred             HHHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCC-------------------------CCCHHHHHHHHHHHHH
Q 046907          124 INTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRR-------------------------ELDWLARHRIALGLAC  177 (345)
Q Consensus       124 ~~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~-------------------------~l~~~~~~~i~~~i~~  177 (345)
                      +.+++++ +||||+++++++..++  .++++++++++++                         .+++..+..++.|++.
T Consensus        76 ~~~l~~l~~hp~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  153 (327)
T 1fvr_A           76 LEVLCKLGHHPNIINLLGACEHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR  153 (327)
T ss_dssp             HHHHTTCCCCTTBCCEEEEEEETT--EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHH
T ss_pred             HHHHHhccCCCchhhhceeeeeCC--ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHH
Confidence            9999999 9999999999998776  6889999997754                         3567777899999999


Q ss_pred             HHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-H
Q 046907          178 GLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-F  256 (345)
Q Consensus       178 ~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-l  256 (345)
                      ||.|||+.+   ++||||||+||+++.++.+||+|||++......   .......++..|+|||.+.+..++.++||| +
T Consensus       154 aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  227 (327)
T 1fvr_A          154 GMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY  227 (327)
T ss_dssp             HHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHH
T ss_pred             HHHHHHhCC---ccCCCCccceEEEcCCCeEEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHH
Confidence            999999998   999999999999999999999999998743221   112234668899999999988899999999 9


Q ss_pred             HHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 046907          257 GALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKD  335 (345)
Q Consensus       257 G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~  335 (345)
                      |+++|+|++ |..||...    ........+...   ....          ........+.+++.+||+.||.+|||+.+
T Consensus       228 G~il~ellt~g~~pf~~~----~~~~~~~~~~~~---~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~e  290 (327)
T 1fvr_A          228 GVLLWEIVSLGGTPYCGM----TCAELYEKLPQG---YRLE----------KPLNCDDEVYDLMRQCWREKPYERPSFAQ  290 (327)
T ss_dssp             HHHHHHHHTTSCCTTTTC----CHHHHHHHGGGT---CCCC----------CCTTBCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHcCCCCCCCCC----cHHHHHHHhhcC---CCCC----------CCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence            999999998 99997432    222222222111   1110          01112234788999999999999999999


Q ss_pred             HHHHHhhhh
Q 046907          336 VRRMLSQIQ  344 (345)
Q Consensus       336 ll~~L~~l~  344 (345)
                      +++.|+++.
T Consensus       291 ll~~L~~~~  299 (327)
T 1fvr_A          291 ILVSLNRML  299 (327)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998873


No 182
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=7.4e-40  Score=295.88  Aligned_cols=248  Identities=21%  Similarity=0.268  Sum_probs=192.7

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.. .+|..||+|.+..........                     ......+.+|+.+
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~---------------------~~~~~~~~~E~~~   68 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREK-STGLEYAAKFIKKRQSRASRR---------------------GVSREEIEREVSI   68 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEBCSSSSCSS---------------------SBCHHHHHHHHHH
T ss_pred             hccEEEeeEeeecCCEEEEEEEEC-CCCeEEEEEEEeccccccccc---------------------chhHHHHHHHHHH
Confidence            457999999999999999999864 579999999997543321100                     0014567889999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++...+  .++++++++.++++         ++......++.|++.||.|||+.+   ++||||||
T Consensus        69 l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp  143 (321)
T 2a2a_A           69 LRQVLHHNVITLHDVYENRT--DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKP  143 (321)
T ss_dssp             HHHCCCTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred             HHhCCCCCcceEEEEEecCC--EEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCh
Confidence            99999999999999998765  68899999987654         456677899999999999999998   99999999


Q ss_pred             CCeeecCCC----CeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcc
Q 046907          198 VNVLLDDDI----EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDK  272 (345)
Q Consensus       198 ~nil~~~~~----~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~  272 (345)
                      +||+++.++    .++|+|||++........   .....||+.|+|||.+.+..++.++||| +|+++|+|++|..||..
T Consensus       144 ~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  220 (321)
T 2a2a_A          144 ENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  220 (321)
T ss_dssp             GGEEESCTTSSSCCEEECCCTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             HHEEEecCCCCcCCEEEccCccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence            999999877    799999999987654322   2346789999999999998999999999 99999999999999743


Q ss_pred             cccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          273 FFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                          .........+.....   .   .++...    ......+.+++..||+.||++|||+.++++
T Consensus       221 ----~~~~~~~~~i~~~~~---~---~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          221 ----DTKQETLANITSVSY---D---FDEEFF----SHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             ----SSHHHHHHHHHTTCC---C---CCHHHH----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             ----CCHHHHHHHHHhccc---c---cChhhh----cccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                222333332222110   0   011000    111234788999999999999999999986


No 183
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=6.9e-40  Score=300.52  Aligned_cols=259  Identities=17%  Similarity=0.211  Sum_probs=182.5

Q ss_pred             hhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           41 LAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQI  120 (345)
Q Consensus        41 ~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (345)
                      .......++|++.+.||+|+||.||+|++. .+|..||||.+......                            ....
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~----------------------------~~~~   66 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEK-STGMSVAIKKVIQDPRF----------------------------RNRE   66 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEET-TTCCEEEEEEEECCTTC----------------------------CCHH
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEecCccc----------------------------cHHH
Confidence            344567789999999999999999999864 57999999998653221                            2234


Q ss_pred             HHHHHHHhhccCCCccceeEEEecCC-----cceeeeeccccCCC------------CCCCHHHHHHHHHHHHHHHHHHh
Q 046907          121 QSEINTVGQIRHRNLHPLLAHVTRPD-----CHLLYILNDVSQGR------------RELDWLARHRIALGLACGLEYLH  183 (345)
Q Consensus       121 ~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~l~~~~~~~~~~------------~~l~~~~~~~i~~~i~~~l~~lh  183 (345)
                      .+++..+..++||||+++++++...+     ..+++++++++.++            ..++......++.|++.||.|||
T Consensus        67 ~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH  146 (360)
T 3e3p_A           67 LQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH  146 (360)
T ss_dssp             HHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence            56777788889999999999986533     23478899998764            23566677889999999999999


Q ss_pred             --hcCCCCeEecCCCCCCeeecC-CCCeEEeccccceecCCCCcceeccCcccCccccccccccccc-cCccchhh-HHH
Q 046907          184 --MHHCPRIIHRDLNPVNVLLDD-DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT-LTEKCDIY-FGA  258 (345)
Q Consensus       184 --~~~~~~iiH~dlk~~nil~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~-~~~~~Dvw-lG~  258 (345)
                        +.+   ++||||||+|||++. ++.+||+|||++........   .....||+.|+|||++.+.. ++.++||| +|+
T Consensus       147 ~~~~~---ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~  220 (360)
T 3e3p_A          147 LPSVN---VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGC  220 (360)
T ss_dssp             STTTC---CBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred             CCCCC---eecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHH
Confidence              888   999999999999996 88999999999987654332   23467899999999997655 89999999 999


Q ss_pred             HHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCC---------cccc---------ccccCCCcHHHHHHHHHHHh
Q 046907          259 LLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPK---------RAID---------SKLVGNGCEEQMLLVLKIAC  320 (345)
Q Consensus       259 vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~---------~~~~~~~~~~~~~~l~~li~  320 (345)
                      ++|+|++|..||..    .........+......+...         ...+         ..............+.+++.
T Consensus       221 il~ell~g~~pf~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  296 (360)
T 3e3p_A          221 IFAEMMLGEPIFRG----DNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLS  296 (360)
T ss_dssp             HHHHHHHSSCSSCC----SSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHH
T ss_pred             HHHHHHhCCCCcCC----CChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHH
Confidence            99999999999754    23333333332222111100         0000         00111112224556889999


Q ss_pred             hccCCCCCCCCCHHHHHH
Q 046907          321 FCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       321 ~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .||+.||.+|||+.++++
T Consensus       297 ~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          297 ALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHTCSSGGGSCCHHHHTT
T ss_pred             HHhccCccccCCHHHHhc
Confidence            999999999999999985


No 184
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=9.4e-40  Score=288.85  Aligned_cols=241  Identities=21%  Similarity=0.268  Sum_probs=189.1

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.+ .++..+|+|.+......                           ..+.+.+|+.+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~a~k~~~~~~~~---------------------------~~~~~~~E~~~   59 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQK-GTRIRRAAKKIPKYFVE---------------------------DVDRFKQEIEI   59 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCS---------------------------CHHHHHHHHHH
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeC-CCCcEEEEEeehhhccc---------------------------hHHHHHHHHHH
Confidence            357999999999999999999864 57889999998542211                           14567789999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++..++  .++++++++.++++         +++.....++.|++.||.|||+.+   ++|+||||
T Consensus        60 l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp  134 (277)
T 3f3z_A           60 MKSLDHPNIIRLYETFEDNT--DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKP  134 (277)
T ss_dssp             HHTCCCTTBCCEEEEEECSS--EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred             HHhCCCCCEeeEEEEEecCC--eEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCH
Confidence            99999999999999998765  68899999988654         567778899999999999999999   99999999


Q ss_pred             CCeee---cCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          198 VNVLL---DDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       198 ~nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      +||++   +.++.++|+|||++........   .....||+.|+|||.+.+. ++.++||| +|+++|+|++|..||...
T Consensus       135 ~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~  210 (277)
T 3f3z_A          135 ENFLFLTDSPDSPLKLIDFGLAARFKPGKM---MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP  210 (277)
T ss_dssp             GGEEESSSSTTCCEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             HHEEEecCCCCCcEEEEecccceeccCccc---hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCC
Confidence            99999   7888999999999987654332   2346789999999998764 89999999 999999999999997542


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                          ........+...... .+.     ...    ......+.+++..||+.||++|||+.++++
T Consensus       211 ----~~~~~~~~~~~~~~~-~~~-----~~~----~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          211 ----TDSEVMLKIREGTFT-FPE-----KDW----LNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             ----SHHHHHHHHHHCCCC-CCH-----HHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ----CHHHHHHHHHhCCCC-CCc-----hhh----hcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                222332222221110 000     000    011235788999999999999999999875


No 185
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=4.9e-40  Score=301.68  Aligned_cols=191  Identities=23%  Similarity=0.376  Sum_probs=162.4

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|++. .++..||+|.+.....                          ......+.+|+.
T Consensus        31 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~va~K~~~~~~~--------------------------~~~~~~~~~E~~   83 (360)
T 3eqc_A           31 KDDDFEKISELGAGNGGVVFKVSHK-PSGLVMARKLIHLEIK--------------------------PAIRNQIIRELQ   83 (360)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEECCCC--------------------------HHHHHHHHHHHG
T ss_pred             ccccceeeeeecCCCCeEEEEEEEC-CCCcEEEEEEeccccC--------------------------HHHHHHHHHHHH
Confidence            4568999999999999999999964 5799999999965421                          223567889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhc-CCCCeEecCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMH-HCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~-~~~~iiH~dl  195 (345)
                      +++.++||||+++++++..++  .+++++++++++++         ++......++.|++.||.|||+. +   ++||||
T Consensus        84 ~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dl  158 (360)
T 3eqc_A           84 VLHECNSPYIVGFYGAFYSDG--EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDV  158 (360)
T ss_dssp             GGGGCCCTTBCCEEEEEEETT--EEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCC
T ss_pred             HHHHCCCCCEEEEeEEEEECC--EEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCc
Confidence            999999999999999998776  68999999988654         45556678999999999999996 7   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDK  272 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~  272 (345)
                      ||+||+++.++.++|+|||++......    ......||+.|+|||.+.+..++.++||| +|+++|+|++|..||..
T Consensus       159 kp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  232 (360)
T 3eqc_A          159 KPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  232 (360)
T ss_dssp             SGGGEEECTTCCEEECCCCCCHHHHHH----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred             cHHHEEECCCCCEEEEECCCCcccccc----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999998654321    12346789999999999998999999999 99999999999999754


No 186
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.1e-39  Score=289.96  Aligned_cols=240  Identities=25%  Similarity=0.356  Sum_probs=182.0

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|.+.+.||+|+||.||+|+.+ .++..+|+|.+......                          ...+.+.+|+.++
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~--------------------------~~~~~~~~E~~~l   74 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEER-SSGLERVIKTINKDRSQ--------------------------VPMEQIEAEIEVL   74 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEGGGCC--------------------------SCHHHHHHHHHHH
T ss_pred             hheeecceeccCCCeEEEEEEEc-cCCceEEEEEeeccccc--------------------------hhHHHHHHHHHHH
Confidence            58999999999999999999864 57899999998643211                          1245678899999


Q ss_pred             hhccCCCccceeEEEecCCcceeeeeccccCCCCC-------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          128 GQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------LDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      +.++||||+++++++...+  .++++++++.++++             +++..+..++.|++.||.|||+.+   ++|||
T Consensus        75 ~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~d  149 (285)
T 3is5_A           75 KSLDHPNIIKIFEVFEDYH--NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKD  149 (285)
T ss_dssp             HTCCCTTBCCEEEEEECSS--EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCC
T ss_pred             HhCCCchHHhHHHheecCC--eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECC
Confidence            9999999999999998765  68999999988654             566667789999999999999998   99999


Q ss_pred             CCCCCeeec---CCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCC
Q 046907          195 LNPVNVLLD---DDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPS  270 (345)
Q Consensus       195 lk~~nil~~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~  270 (345)
                      |||+||+++   .++.+||+|||++.......   ......||+.|+|||.+.+ .++.++||| +|+++|+|++|..||
T Consensus       150 ikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf  225 (285)
T 3is5_A          150 LKPENILFQDTSPHSPIKIIDFGLAELFKSDE---HSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPF  225 (285)
T ss_dssp             CSGGGEEESSSSTTCCEEECCCCCCCC-------------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCHHHEEEecCCCCCCEEEEeeecceecCCcc---cCcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCC
Confidence            999999994   56789999999997654332   2234678999999999864 678999999 999999999999997


Q ss_pred             cccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          271 DKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ...    ...........   ...... ...   ..    ....+.+++..||+.||++|||+.++++
T Consensus       226 ~~~----~~~~~~~~~~~---~~~~~~-~~~---~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          226 TGT----SLEEVQQKATY---KEPNYA-VEC---RP----LTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             CCS----SHHHHHHHHHH---CCCCCC-C-----CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             CCC----CHHHHHhhhcc---CCcccc-ccc---Cc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            542    22222222211   111100 000   00    1234678899999999999999999985


No 187
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.9e-39  Score=290.64  Aligned_cols=243  Identities=26%  Similarity=0.412  Sum_probs=193.5

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..+.|++++.||+|+||.||+|+.. .+++.||+|.+......                          .....+.+|+.
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~--------------------------~~~~~~~~e~~   72 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDN-RTQKVVAIKIIDLEEAE--------------------------DEIEDIQQEIT   72 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEETTTCS--------------------------TTHHHHHHHHH
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEEC-CCCcEEEEEEecccccH--------------------------HHHHHHHHHHH
Confidence            4467999999999999999999854 57899999998654321                          12456788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCC--------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR--------ELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~--------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +++.++||||+++++++..++  .+++++++++++.        .+++.....++.|++.||.|||+.+   ++|+||||
T Consensus        73 ~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p  147 (303)
T 3a7i_A           73 VLSQCDSPYVTKYYGSYLKDT--KLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEK---KIHRDIKA  147 (303)
T ss_dssp             HHHHCCCTTBCCEEEEEEETT--EEEEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred             HHHhCCCCCEeEEEEEEecCC--eEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCh
Confidence            999999999999999998766  6889999998753        3677788899999999999999999   99999999


Q ss_pred             CCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccc
Q 046907          198 VNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQH  276 (345)
Q Consensus       198 ~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~  276 (345)
                      +||+++.++.++|+|||++........  ......||..|+|||.+.+..++.++||| +|+++|+|++|..||...   
T Consensus       148 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~---  222 (303)
T 3a7i_A          148 ANVLLSEHGEVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL---  222 (303)
T ss_dssp             GGEEECTTSCEEECCCTTCEECBTTBC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS---
T ss_pred             heEEECCCCCEEEeecccceecCcccc--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc---
Confidence            999999999999999999987654322  22446789999999999998999999999 999999999999997532   


Q ss_pred             cchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 046907          277 TNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRM  339 (345)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~  339 (345)
                       ........+....   .+      ....    .....+.+++..||+.||.+|||+.++++.
T Consensus       223 -~~~~~~~~~~~~~---~~------~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          223 -HPMKVLFLIPKNN---PP------TLEG----NYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             -CHHHHHHHHHHSC---CC------CCCS----SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             -CHHHHHHHhhcCC---CC------CCcc----ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence             2222322222211   11      0011    112347788999999999999999999763


No 188
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=1e-39  Score=311.89  Aligned_cols=242  Identities=22%  Similarity=0.334  Sum_probs=186.0

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++++.||+|+||.||+|+.+ .++..||+|.+.......                         .....+.+|+.++
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~E~~~l   90 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDK-VTHVERAIKIIRKTSVST-------------------------SSNSKLLEEVAVL   90 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEET-TTCCEEEEEEEEC------------------------------CTTHHHHHHHHHH
T ss_pred             cCeEEeeEEecCCCEEEEEEEEC-CCCcEEEEEEEeccccCc-------------------------hHHHHHHHHHHHH
Confidence            36999999999999999999964 578999999996543221                         1245677899999


Q ss_pred             hhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 046907          128 GQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPV  198 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~  198 (345)
                      +.++||||+++++++..++  .++++++++.++.+         +++..+..++.|++.||.|||+.+   ++||||||+
T Consensus        91 ~~l~hpniv~~~~~~~~~~--~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~  165 (494)
T 3lij_A           91 KLLDHPNIMKLYDFFEDKR--NYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPE  165 (494)
T ss_dssp             TTCCCTTBCCEEEEEECSS--EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGG
T ss_pred             HhCCCCCCCeEEEEEEeCC--EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChh
Confidence            9999999999999998766  78999999998765         556677889999999999999999   999999999


Q ss_pred             CeeecC---CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          199 NVLLDD---DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       199 nil~~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      |||++.   ++.+||+|||++.......   ......||+.|+|||++.+ .++.++||| +|+++|+|++|..||..  
T Consensus       166 Nil~~~~~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~--  239 (494)
T 3lij_A          166 NLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGG--  239 (494)
T ss_dssp             GEEESCSSTTCCEEECCCTTCEECBTTB---CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCC--
T ss_pred             hEEEeCCCCCCcEEEEECCCCeECCCCc---cccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCC--
Confidence            999975   4559999999998765432   2344679999999999874 689999999 99999999999999643  


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                        .........+..........          ........+.+++..||+.||.+|||+.++++
T Consensus       240 --~~~~~~~~~i~~~~~~~~~~----------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          240 --QTDQEILRKVEKGKYTFDSP----------EWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             --SSHHHHHHHHHHTCCCCCSG----------GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --CCHHHHHHHHHhCCCCCCch----------hcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence              23334444333322111100          00112234778899999999999999999875


No 189
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=3.9e-40  Score=307.15  Aligned_cols=259  Identities=23%  Similarity=0.269  Sum_probs=178.5

Q ss_pred             CCccc-ccccccCcceeeEEEEecC-CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLAS-LEKIGSGGCGEVYKAELPG-QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        48 ~~~~~-~~~iG~G~~g~V~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      +.|++ .++||+|+||.||+|+++. .++..||||.+.....                             ...+.+|+.
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----------------------------~~~~~~E~~   70 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----------------------------SMSACREIA   70 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----------------------------CHHHHHHHH
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----------------------------CHHHHHHHH
Confidence            45666 4589999999999998642 3688999999964321                             234668999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCC-----------------CCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR-----------------ELDWLARHRIALGLACGLEYLHMHHCP  188 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~-----------------~l~~~~~~~i~~~i~~~l~~lh~~~~~  188 (345)
                      +++.++||||+++++++.......++++++|+.++.                 .+++..+..++.|++.||.|||+.+  
T Consensus        71 ~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--  148 (405)
T 3rgf_A           71 LLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--  148 (405)
T ss_dssp             HHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            999999999999999998766668999999987531                 2677778899999999999999999  


Q ss_pred             CeEecCCCCCCeee----cCCCCeEEeccccceecCCCCc-ceeccCcccCccccccccccccc-cCccchhh-HHHHHH
Q 046907          189 RIIHRDLNPVNVLL----DDDIEARISGFGFARAIPDAHT-HITTSNVVGTVEYIAPEYLQMLT-LTEKCDIY-FGALLA  261 (345)
Q Consensus       189 ~iiH~dlk~~nil~----~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~gt~~~~aPE~~~~~~-~~~~~Dvw-lG~vl~  261 (345)
                       ++||||||+|||+    +.++.+||+|||++........ ........||+.|+|||++.+.. ++.++||| +|+++|
T Consensus       149 -ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~  227 (405)
T 3rgf_A          149 -VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA  227 (405)
T ss_dssp             -CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHH
T ss_pred             -EeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHH
Confidence             9999999999999    6778999999999987643211 12234568899999999998754 89999999 999999


Q ss_pred             HHHhCCCCCcccccc-----cchhhHHHHHHHHhhhcCCCcccccc---------------ccCCCcH---------HHH
Q 046907          262 GLVMGKLPSDKFFQH-----TNEMSFVKWMRNVMASENPKRAIDSK---------------LVGNGCE---------EQM  312 (345)
Q Consensus       262 el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~---------~~~  312 (345)
                      +|++|..||......     ....+....+......+.........               .......         ...
T Consensus       228 ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (405)
T 3rgf_A          228 ELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPD  307 (405)
T ss_dssp             HHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTT
T ss_pred             HHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCC
Confidence            999999998542211     11122333333333222211100000               0000000         002


Q ss_pred             HHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          313 LLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       313 ~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ..+.+|+..||+.||.+|||+.++++
T Consensus       308 ~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          308 SKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             SHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhc
Confidence            35778999999999999999999985


No 190
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=2.8e-40  Score=309.37  Aligned_cols=250  Identities=21%  Similarity=0.269  Sum_probs=185.6

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      ..+|++.+.||+|+||.||+|++. .+|+.||||.+....                               ....+|+.+
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~~vaiK~~~~~~-------------------------------~~~~~E~~i  100 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLC-DSGELVAIKKVLQDK-------------------------------RFKNRELQI  100 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEECCT-------------------------------TSCCHHHHH
T ss_pred             cceEEeeeEEeeCCCEEEEEEEEC-CCCcEEEEEEecccc-------------------------------hhHHHHHHH
Confidence            347999999999999999999965 579999999986431                               112368999


Q ss_pred             HhhccCCCccceeEEEecC----CcceeeeeccccCCC------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          127 VGQIRHRNLHPLLAHVTRP----DCHLLYILNDVSQGR------------RELDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~----~~~~l~~~~~~~~~~------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      ++.++||||+++++++...    +..+++++++|++++            ..+++..+..++.|++.||.|||+.+   |
T Consensus       101 l~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---i  177 (420)
T 1j1b_A          101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---I  177 (420)
T ss_dssp             HHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---E
T ss_pred             HHHcCCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---c
Confidence            9999999999999988542    334577899998752            34677778899999999999999998   9


Q ss_pred             EecCCCCCCeeecCC-CCeEEeccccceecCCCCcceeccCcccCcccccccccccc-ccCccchhh-HHHHHHHHHhCC
Q 046907          191 IHRDLNPVNVLLDDD-IEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQML-TLTEKCDIY-FGALLAGLVMGK  267 (345)
Q Consensus       191 iH~dlk~~nil~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~-~~~~~~Dvw-lG~vl~el~tg~  267 (345)
                      +||||||+|||++.+ +.+||+|||+++.......   .....||+.|+|||++.+. .++.++||| +|+++|||++|.
T Consensus       178 vHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~  254 (420)
T 1j1b_A          178 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ  254 (420)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccCCChhhEEEeCCCCeEEeccchhhhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence            999999999999965 5689999999987644322   2346789999999999765 689999999 999999999999


Q ss_pred             CCCcccccccchhhHHHHHHHHhhhcCC----------CccccccccCC-----CcHHHHHHHHHHHhhccCCCCCCCCC
Q 046907          268 LPSDKFFQHTNEMSFVKWMRNVMASENP----------KRAIDSKLVGN-----GCEEQMLLVLKIACFCTLEDPNERPN  332 (345)
Q Consensus       268 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-----~~~~~~~~l~~li~~Cl~~dp~~Rpt  332 (345)
                      .||...    ...+....+......+..          .....+.....     ..+.....+.+|+.+||+.||.+|||
T Consensus       255 ~pf~~~----~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t  330 (420)
T 1j1b_A          255 PIFPGD----SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT  330 (420)
T ss_dssp             CSSCCS----SHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CCCCCC----CHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCC
Confidence            997542    222222222222111100          00000000000     01122345788999999999999999


Q ss_pred             HHHHHH
Q 046907          333 SKDVRR  338 (345)
Q Consensus       333 ~~~ll~  338 (345)
                      +.++++
T Consensus       331 ~~e~l~  336 (420)
T 1j1b_A          331 PLEACA  336 (420)
T ss_dssp             HHHHHT
T ss_pred             HHHHhC
Confidence            999975


No 191
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=2e-40  Score=310.23  Aligned_cols=251  Identities=22%  Similarity=0.309  Sum_probs=181.5

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|.+.+.||+|+||.||+|+.+ .+++.||||.+..........                   ........+.+|+.
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~~~-------------------~~~~~~~~~~~E~~  192 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFER-KTCKKVAIRIISKRKFAIGSA-------------------READPALNVETEIE  192 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEGGGGTTC---------------------------CCHHHHHH
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEEC-CCCcEEEEEEEEechhccccc-------------------ccchhHHHHHHHHH
Confidence            4678999999999999999999864 578999999986432211000                   00122345788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      ++++++||||+++++++..++   .+++++++.++++         +++.....++.|++.||.|||+.+   ++|||||
T Consensus       193 ~l~~l~hpniv~l~~~~~~~~---~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlk  266 (419)
T 3i6u_A          193 ILKKLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLK  266 (419)
T ss_dssp             HHHHCCCTTBCCCCEEEESSE---EEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCC
T ss_pred             HHHhCCCCCEeeEEEEEecCc---eEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCC
Confidence            999999999999999986543   6889999987654         567788899999999999999998   9999999


Q ss_pred             CCCeeecCC---CCeEEeccccceecCCCCcceeccCcccCccccccccccc---cccCccchhh-HHHHHHHHHhCCCC
Q 046907          197 PVNVLLDDD---IEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM---LTLTEKCDIY-FGALLAGLVMGKLP  269 (345)
Q Consensus       197 ~~nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~---~~~~~~~Dvw-lG~vl~el~tg~~p  269 (345)
                      |+|||++.+   ..+||+|||++.......   ......||+.|+|||++.+   ..++.++||| +|+++|+|++|..|
T Consensus       267 p~NIll~~~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~p  343 (419)
T 3i6u_A          267 PENVLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP  343 (419)
T ss_dssp             GGGEEESSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             hHhEEEecCCCcceEEEeecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence            999999754   459999999998764432   2234689999999999864   5678899999 99999999999999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      |.....   .......+........      +..    .......+.+++.+||+.||++|||+.++++
T Consensus       344 f~~~~~---~~~~~~~i~~~~~~~~------~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          344 FSEHRT---QVSLKDQITSGKYNFI------PEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             SCCCSS---SCCHHHHHHTTCCCCC------HHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCcc---hHHHHHHHhcCCCCCC------chh----hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            864322   2223333322111100      000    0112345788999999999999999999986


No 192
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=1.8e-39  Score=294.60  Aligned_cols=252  Identities=21%  Similarity=0.293  Sum_probs=177.5

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      .....+|++.+.||+|+||.||+|++. .+++.||+|.+....                           ......+.+|
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------------------~~~~~~~~~e   75 (337)
T 3ll6_A           24 ELGELRLRVRRVLAEGGFAFVYEAQDV-GSGREYALKRLLSNE---------------------------EEKNRAIIQE   75 (337)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEEEESS---------------------------HHHHHHHHHH
T ss_pred             eccCceEEEEEEEccCCceEEEEEEEC-CCCcEEEEEEecCCc---------------------------hHHHHHHHHH
Confidence            345668999999999999999999964 578999999985432                           2235567889


Q ss_pred             HHHHhhcc-CCCccceeEEEec------CCcceeeeeccccCCC-----------CCCCHHHHHHHHHHHHHHHHHHhhc
Q 046907          124 INTVGQIR-HRNLHPLLAHVTR------PDCHLLYILNDVSQGR-----------RELDWLARHRIALGLACGLEYLHMH  185 (345)
Q Consensus       124 ~~~l~~l~-hpniv~l~~~~~~------~~~~~l~~~~~~~~~~-----------~~l~~~~~~~i~~~i~~~l~~lh~~  185 (345)
                      +.+++++. ||||+++++++..      .+...++++++++.+.           ..+++..+..++.|++.||.|||+.
T Consensus        76 ~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~  155 (337)
T 3ll6_A           76 VCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ  155 (337)
T ss_dssp             HHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999995 9999999998853      2334578899998652           2367778889999999999999998


Q ss_pred             CCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcc----------eeccCcccCccccccccc---cccccCccc
Q 046907          186 HCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTH----------ITTSNVVGTVEYIAPEYL---QMLTLTEKC  252 (345)
Q Consensus       186 ~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~~gt~~~~aPE~~---~~~~~~~~~  252 (345)
                      + ++++||||||+||+++.++.+||+|||++.........          .......||+.|+|||.+   .+..++.++
T Consensus       156 ~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~  234 (337)
T 3ll6_A          156 K-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ  234 (337)
T ss_dssp             S-SCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHH
T ss_pred             C-CCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHH
Confidence            5 34999999999999999999999999999876543211          011245689999999998   566788999


Q ss_pred             hhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCC
Q 046907          253 DIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERP  331 (345)
Q Consensus       253 Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rp  331 (345)
                      ||| +|+++|+|++|..||.....    .   ..+......+ ...            .....+.+++..||+.||++||
T Consensus       235 Dv~slG~il~el~~g~~p~~~~~~----~---~~~~~~~~~~-~~~------------~~~~~~~~li~~~l~~~p~~Rp  294 (337)
T 3ll6_A          235 DIWALGCILYLLCFRQHPFEDGAK----L---RIVNGKYSIP-PHD------------TQYTVFHSLIRAMLQVNPEERL  294 (337)
T ss_dssp             HHHHHHHHHHHHHHSSCCC-------------------CCCC-TTC------------CSSGGGHHHHHHHSCSSGGGSC
T ss_pred             hHHHHHHHHHHHHhCCCCCcchhH----H---HhhcCcccCC-ccc------------ccchHHHHHHHHHccCChhhCc
Confidence            999 99999999999999753211    1   1111111100 000            0112267889999999999999


Q ss_pred             CHHHHHHHHhhhh
Q 046907          332 NSKDVRRMLSQIQ  344 (345)
Q Consensus       332 t~~~ll~~L~~l~  344 (345)
                      |+.++++.|+.+.
T Consensus       295 s~~e~l~~l~~~~  307 (337)
T 3ll6_A          295 SIAEVVHQLQEIA  307 (337)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHH
Confidence            9999999998873


No 193
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=2e-39  Score=289.84  Aligned_cols=255  Identities=23%  Similarity=0.299  Sum_probs=189.4

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      -++|++.+.||+|+||.||+|+.+ .+|+.||+|.+......                         ......+.+|+.+
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~e~~~   55 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNK-LTGEVVALKKIRLDTET-------------------------EGVPSTAIREISL   55 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEC---------------------------------CCHHHHHHHHH
T ss_pred             cchhhhhhhhccCCCeeEEEEEEc-CCCceEEEEEeecCccc-------------------------hhhHHHHHHHHHH
Confidence            368999999999999999999864 57899999998543211                         1124567789999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++++||||+++++++..++  .++++++++.+.          ..++......++.|++.||.|||+.+   ++|+|||
T Consensus        56 l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk  130 (299)
T 2r3i_A           56 LKELNHPNIVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLK  130 (299)
T ss_dssp             HTTCCCTTBCCEEEEEEETT--EEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCC
T ss_pred             HHHcCCCCeeeEEEEEecCC--ceEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCC
Confidence            99999999999999998776  688889988641          23667778889999999999999999   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccc-cCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT-LTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~-~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      |+||+++.++.+||+|||++........  ......||..|+|||.+.+.. ++.++||| +|+++|+|++|..||..  
T Consensus       131 p~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~--  206 (299)
T 2r3i_A          131 PQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPG--  206 (299)
T ss_dssp             GGGEEECTTSCEEECSTTHHHHHCCCSB--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC--
T ss_pred             HHHeEEcCCCCEEECcchhhhhccCCcc--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCC--
Confidence            9999999999999999999976643221  223457899999999998765 78999999 99999999999999753  


Q ss_pred             cccchhhHHHHHHHHhhhcCCCcc--------ccccccC---CC----cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRA--------IDSKLVG---NG----CEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~----~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                        ....+....+......+.....        ..+....   ..    .+.....+.+++.+||+.||++|||+.++++
T Consensus       207 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~  283 (299)
T 2r3i_A          207 --DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  283 (299)
T ss_dssp             --SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --ccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence              2333333333332221111000        0000000   00    0112345788999999999999999999986


No 194
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=7.6e-40  Score=298.04  Aligned_cols=245  Identities=19%  Similarity=0.340  Sum_probs=185.8

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ....++|++++.||+|+||.||+|+.. .+|+.||||.+.......                          ....+..|
T Consensus        47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~--------------------------~~~~~~~e   99 (340)
T 3an0_A           47 EVKADDLEPIMELGRGAYGVVEKMRHV-PSGQIMAVKRIRATVNSQ--------------------------EQKRLLMD   99 (340)
T ss_dssp             CCCSSCEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSCCCCH--------------------------HHHHHHHH
T ss_pred             EEehhheeEeeEecccCCEEEEEEEEc-CCCCEEEEEEeccccCcH--------------------------HHHHHHHH
Confidence            456789999999999999999999864 579999999997543221                          12334445


Q ss_pred             HHH-HhhccCCCccceeEEEecCCcceeeeeccccCC------------CCCCCHHHHHHHHHHHHHHHHHHhhc-CCCC
Q 046907          124 INT-VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG------------RRELDWLARHRIALGLACGLEYLHMH-HCPR  189 (345)
Q Consensus       124 ~~~-l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~lh~~-~~~~  189 (345)
                      ..+ ++.++||||+++++++..++  .+++++|++.+            +..+++..+..++.|++.||.|||+. +   
T Consensus       100 ~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---  174 (340)
T 3an0_A          100 LDISMRTVDCPFTVTFYGALFREG--DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---  174 (340)
T ss_dssp             HHHHHTTCCCTTTCCEEEEEECSS--CEEEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred             HHHHHhhcCCCcEEEEeeEEEeCC--cEEEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---
Confidence            555 67789999999999998776  68889999875            23467777889999999999999987 8   


Q ss_pred             eEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc----cccCccchhh-HHHHHHHHH
Q 046907          190 IIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM----LTLTEKCDIY-FGALLAGLV  264 (345)
Q Consensus       190 iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~----~~~~~~~Dvw-lG~vl~el~  264 (345)
                      ++||||||+||+++.++.+||+|||++.......   ......||+.|+|||++.+    ..++.++||| +|+++|||+
T Consensus       175 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~  251 (340)
T 3an0_A          175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA  251 (340)
T ss_dssp             CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHH---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHH
T ss_pred             eecCCCCHHHEEECCCCCEEEeeCCCceeccccc---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999999999999999997664321   1223578999999999753    3688999999 999999999


Q ss_pred             hCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          265 MGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       265 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      +|..||....   .....   +........+..      .   .......+.++|..||+.||++|||+.++++
T Consensus       252 tg~~p~~~~~---~~~~~---~~~~~~~~~~~~------~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  310 (340)
T 3an0_A          252 ILRFPYDSWG---TPFQQ---LKQVVEEPSPQL------P---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  310 (340)
T ss_dssp             HTSCSSCCCS---CHHHH---HHHHHHSCCCCC------C---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HCCCCCcccc---chHHH---HHHHhcCCCCCC------C---cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            9999975421   11111   111111111110      0   0112235788999999999999999999976


No 195
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=2.6e-39  Score=297.45  Aligned_cols=244  Identities=12%  Similarity=0.073  Sum_probs=188.0

Q ss_pred             HHhhcCCcccccccccCcceeeEEEEe----cCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 046907           43 FLEKKGGLASLEKIGSGGCGEVYKAEL----PGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMR  118 (345)
Q Consensus        43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (345)
                      +....++|.+.+.||+|+||.||+|++    ...+++.||||.+....                              ..
T Consensus        60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------------------------~~  109 (365)
T 3e7e_A           60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN------------------------------PW  109 (365)
T ss_dssp             EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC------------------------------HH
T ss_pred             EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC------------------------------hh
Confidence            344677899999999999999999953    23478999999996432                              23


Q ss_pred             HHHHHHHHHhhcc---CCCccceeEEEecCCcceeeeeccccCCCCC--------------CCHHHHHHHHHHHHHHHHH
Q 046907          119 QIQSEINTVGQIR---HRNLHPLLAHVTRPDCHLLYILNDVSQGRRE--------------LDWLARHRIALGLACGLEY  181 (345)
Q Consensus       119 ~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~--------------l~~~~~~~i~~~i~~~l~~  181 (345)
                      .+..|+.+++.++   |+||+.+++++..++  ..++++||+.++++              +++..+..++.|++.||.|
T Consensus       110 ~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~  187 (365)
T 3e7e_A          110 EFYIGTQLMERLKPSMQHMFMKFYSAHLFQN--GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQ  187 (365)
T ss_dssp             HHHHHHHHHHHSCGGGGGGBCCEEEEEECSS--CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhheeeecCC--CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHH
Confidence            4556667766665   999999999998776  57899999987644              5566678899999999999


Q ss_pred             HhhcCCCCeEecCCCCCCeeecC-----------CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCc
Q 046907          182 LHMHHCPRIIHRDLNPVNVLLDD-----------DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTE  250 (345)
Q Consensus       182 lh~~~~~~iiH~dlk~~nil~~~-----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~  250 (345)
                      ||+.+   |+||||||+|||++.           ++.+||+|||++................||+.|+|||++.+..++.
T Consensus       188 lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  264 (365)
T 3e7e_A          188 VHDCE---IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNY  264 (365)
T ss_dssp             HHTTT---EECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBST
T ss_pred             HhhCC---eecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCc
Confidence            99998   999999999999988           8999999999998664333333445678999999999999999999


Q ss_pred             cchhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCC
Q 046907          251 KCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNE  329 (345)
Q Consensus       251 ~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~  329 (345)
                      ++||| +|+++|||++|..||........                   ...........   ...+.+++..|++.+|.+
T Consensus       265 ~~DiwslG~il~elltg~~pf~~~~~~~~-------------------~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~  322 (365)
T 3e7e_A          265 QIDYFGVAATVYCMLFGTYMKVKNEGGEC-------------------KPEGLFRRLPH---LDMWNEFFHVMLNIPDCH  322 (365)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCCEEEETTEE-------------------EECSCCTTCSS---HHHHHHHHHHHHCCCCTT
T ss_pred             cccHHHHHHHHHHHHhCCCccccCCCCce-------------------eechhccccCc---HHHHHHHHHHHcCCCCCC
Confidence            99999 99999999999999753222100                   00000000111   233566777799999999


Q ss_pred             C-CCHHHHHHHHhhh
Q 046907          330 R-PNSKDVRRMLSQI  343 (345)
Q Consensus       330 R-pt~~~ll~~L~~l  343 (345)
                      | |++.++.+.|+++
T Consensus       323 r~~~~~~l~~~l~~~  337 (365)
T 3e7e_A          323 HLPSLDLLRQKLKKV  337 (365)
T ss_dssp             CCCCHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHH
Confidence            9 5788888888765


No 196
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=5.5e-40  Score=293.78  Aligned_cols=259  Identities=25%  Similarity=0.350  Sum_probs=172.9

Q ss_pred             hhhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           40 DLAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQ  119 (345)
Q Consensus        40 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (345)
                      ...|....++|++.+.||+|+||.||+|+.. .+++.||||.+.....                          ......
T Consensus         7 ~~p~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~--------------------------~~~~~~   59 (303)
T 2vwi_A            7 ALPWSINRDDYELQEVIGSGATAVVQAAYCA-PKKEKVAIKRINLEKC--------------------------QTSMDE   59 (303)
T ss_dssp             ------CCCCCEEEEECC---CCCEEEEEC-----CEEEEECCC------------------------------------
T ss_pred             ccccccchhhhhhhheeccccceEEEEEEEC-CCCcEEEEEEEEhhhc--------------------------chhHHH
Confidence            3456778899999999999999999999853 5788999999853211                          122556


Q ss_pred             HHHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------------CCHHHHHHHHHHHHHHHHHH
Q 046907          120 IQSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------------LDWLARHRIALGLACGLEYL  182 (345)
Q Consensus       120 ~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------------l~~~~~~~i~~~i~~~l~~l  182 (345)
                      +.+|+.+++.++||||+++++++..++  ..+++++++.++++                 +++..+..++.|++.||.||
T Consensus        60 ~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  137 (303)
T 2vwi_A           60 LLKEIQAMSQCHHPNIVSYYTSFVVKD--ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL  137 (303)
T ss_dssp             ------CCCCCCCTTBCCEEEEEESSS--CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCCCCEeeEEEEEeecC--CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence            788999999999999999999998776  58889999987543                 56777788999999999999


Q ss_pred             hhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCc---ceeccCcccCccccccccccc-cccCccchhh-HH
Q 046907          183 HMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHT---HITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FG  257 (345)
Q Consensus       183 h~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG  257 (345)
                      |+.+   ++|+||||+||+++.++.++|+|||++........   ........||+.|+|||.+.+ ..++.++||| +|
T Consensus       138 H~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  214 (303)
T 2vwi_A          138 HKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG  214 (303)
T ss_dssp             HHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHH
T ss_pred             HhCC---CCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHH
Confidence            9998   99999999999999999999999999876543211   111234678999999999976 4688999999 99


Q ss_pred             HHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 046907          258 ALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVR  337 (345)
Q Consensus       258 ~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll  337 (345)
                      +++|+|++|..||.....    ....................+....    ......+.+++..||+.||.+|||+.+++
T Consensus       215 ~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll  286 (303)
T 2vwi_A          215 ITAIELATGAAPYHKYPP----MKVLMLTLQNDPPSLETGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTAAELL  286 (303)
T ss_dssp             HHHHHHHHSSCTTTTSCG----GGHHHHHHTSSCCCTTC-----CCC----CCCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             HHHHHHHhCCCCCccCch----hhHHHHHhccCCCccccccccchhh----hhhhHHHHHHHHHHccCChhhCcCHHHHh
Confidence            999999999999754322    2221111111100000001111111    11223577888999999999999999998


Q ss_pred             H
Q 046907          338 R  338 (345)
Q Consensus       338 ~  338 (345)
                      +
T Consensus       287 ~  287 (303)
T 2vwi_A          287 R  287 (303)
T ss_dssp             T
T ss_pred             h
Confidence            6


No 197
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=1.8e-39  Score=295.11  Aligned_cols=243  Identities=19%  Similarity=0.292  Sum_probs=192.6

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|.+.+.||+|+||.||+|+.. .+++.||+|.+.......                        ....+.+.+|+.
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~~------------------------~~~~~~~~~E~~   93 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLK------------------------PHQREKMSMEIS   93 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCS------------------------HHHHHHHHHHHH
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEechhhhcC------------------------HHHHHHHHHHHH
Confidence            5678999999999999999999864 578999999985322111                        223567788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++...+  .++++++++.++.+         +++.....++.|++.||.|||+.+   ++|+|||
T Consensus        94 ~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlk  168 (335)
T 2owb_A           94 IHRSLAHQHVVGFHGFFEDND--FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLK  168 (335)
T ss_dssp             HHHTCCCTTBCCEEEEEECSS--EEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCC
T ss_pred             HHHhCCCCCCCeEEEEEecCC--eEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCC
Confidence            999999999999999998766  78999999987643         566777889999999999999998   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      |+||+++.++.+||+|||++........  ......||..|+|||.+.+..++.++||| +|+++|+|++|..||...  
T Consensus       169 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--  244 (335)
T 2owb_A          169 LGNLFLNEDLEVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--  244 (335)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--
T ss_pred             chhEEEcCCCCEEEeeccCceecccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC--
Confidence            9999999999999999999987643322  22346789999999999998899999999 999999999999997532  


Q ss_pred             ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          276 HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                        ...+....+....  ....        .    .....+.+++.+||+.||++|||+.++++
T Consensus       245 --~~~~~~~~~~~~~--~~~~--------~----~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          245 --CLKETYLRIKKNE--YSIP--------K----HINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             --SHHHHHHHHHHTC--CCCC--------T----TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             --CHHHHHHHHhcCC--CCCC--------c----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              2222222222111  0000        0    11124678899999999999999999875


No 198
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.1e-40  Score=302.15  Aligned_cols=255  Identities=16%  Similarity=0.159  Sum_probs=190.5

Q ss_pred             hcCCcccccccccCcceeeEEEEecCC-------CCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQ-------NGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMR  118 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (345)
                      ..++|++.+.||+|+||.||+|++...       .+..||+|.+...                                .
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------------------------------~   87 (352)
T 2jii_A           40 SGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------------------------------G   87 (352)
T ss_dssp             TSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------------------------------S
T ss_pred             cCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------------------------------c
Confidence            357999999999999999999997532       4889999998532                                2


Q ss_pred             HHHHHHHHHhhccCCCccc---------------eeEEEecCCcceeeeeccccCCC-----------CCCCHHHHHHHH
Q 046907          119 QIQSEINTVGQIRHRNLHP---------------LLAHVTRPDCHLLYILNDVSQGR-----------RELDWLARHRIA  172 (345)
Q Consensus       119 ~~~~E~~~l~~l~hpniv~---------------l~~~~~~~~~~~l~~~~~~~~~~-----------~~l~~~~~~~i~  172 (345)
                      .+.+|+.++++++||||++               +++++...+ ..++++++++ ++           ..+++..+..++
T Consensus        88 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~  165 (352)
T 2jii_A           88 RLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQD-KYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVA  165 (352)
T ss_dssp             THHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETT-TEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCC-cEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHH
Confidence            4567888999999988887               566666533 3788899998 53           346778888999


Q ss_pred             HHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCC--CeEEeccccceecCCCCcc-----eeccCcccCccccccccccc
Q 046907          173 LGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDI--EARISGFGFARAIPDAHTH-----ITTSNVVGTVEYIAPEYLQM  245 (345)
Q Consensus       173 ~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~--~~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~~~aPE~~~~  245 (345)
                      .|++.||.|||+.+   ++||||||+||+++.++  .+||+|||++.........     .......||+.|+|||.+.+
T Consensus       166 ~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  242 (352)
T 2jii_A          166 CRLLDALEFLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG  242 (352)
T ss_dssp             HHHHHHHHHHHHTT---CBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHHHhCC---ccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc
Confidence            99999999999998   99999999999999988  8999999999766432211     11234589999999999999


Q ss_pred             cccCccchhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccC
Q 046907          246 LTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTL  324 (345)
Q Consensus       246 ~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~  324 (345)
                      ..++.++||| +|+++|||++|..||.....  ................ . .........   ......+.+++..||+
T Consensus       243 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~-~-~~~~~~~~~---~~~~~~l~~li~~~l~  315 (352)
T 2jii_A          243 CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP--NTEDIMKQKQKFVDKP-G-PFVGPCGHW---IRPSETLQKYLKVVMA  315 (352)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT--CHHHHHHHHHHHHHSC-C-CEECTTSCE---ECCCHHHHHHHHHHHT
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCcccCCc--CHHHHHHHHHhccCCh-h-hhhhhcccc---CCCcHHHHHHHHHHHh
Confidence            8999999999 99999999999999865332  2222333332222111 1 111110000   0112347788889999


Q ss_pred             CCCCCCCCHHHHHHHHhhhh
Q 046907          325 EDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       325 ~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      .||++|||+.+|++.|+++.
T Consensus       316 ~dp~~Rps~~~l~~~L~~~~  335 (352)
T 2jii_A          316 LTYEEKPPYAMLRNNLEALL  335 (352)
T ss_dssp             CCTTCCCCHHHHHHHHHHHH
T ss_pred             CChhhCCCHHHHHHHHHHHH
Confidence            99999999999999999874


No 199
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=3.5e-40  Score=314.34  Aligned_cols=244  Identities=24%  Similarity=0.367  Sum_probs=192.2

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.+ .+|+.||||.+.......                        ......+.+|+.+
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~------------------------~~~~~~~~~E~~~   79 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQ------------------------KTDKESLLREVQL   79 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCCB------------------------SSCHHHHHHHHHH
T ss_pred             cCceEEeeEEecCCCEEEEEEEEC-CCCCEEEEEEEEhhhccc------------------------chHHHHHHHHHHH
Confidence            458999999999999999999864 579999999986432211                        1125567889999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++...+  .++++++++.++.+         +++..+..++.|++.||.|||+.+   ++||||||
T Consensus        80 l~~l~hpniv~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp  154 (484)
T 3nyv_A           80 LKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKP  154 (484)
T ss_dssp             HTTCCCTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCG
T ss_pred             HHhCCCCCCCcEEEEEEeCC--EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCH
Confidence            99999999999999998766  78999999987654         566778899999999999999999   99999999


Q ss_pred             CCeee---cCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          198 VNVLL---DDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       198 ~nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      +|||+   +.++.+||+|||++........   .....||+.|+|||++.+ .++.++||| +|+++|+|++|..||.. 
T Consensus       155 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~-  229 (484)
T 3nyv_A          155 ENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG-  229 (484)
T ss_dssp             GGEEESSSSTTCCEEECCTTHHHHBCCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCC-
T ss_pred             HHEEEecCCCCCcEEEEeeeeeEEcccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCC-
Confidence            99999   4678999999999987654322   234579999999999977 689999999 99999999999999643 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         .+.......+..........          ........+.+++..||+.||.+|||+.++++
T Consensus       230 ---~~~~~~~~~i~~~~~~~~~~----------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          230 ---ANEYDILKKVEKGKYTFELP----------QWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             ---SSHHHHHHHHHHCCCCCCSG----------GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---CCHHHHHHHHHcCCCCCCCc----------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence               33344444433322111100          01122334778999999999999999999985


No 200
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.4e-39  Score=287.84  Aligned_cols=243  Identities=22%  Similarity=0.351  Sum_probs=168.9

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .+|+.||+|.+......                        .....+.+.+|+.
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~e~~   63 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESI-HTGLEVAIKMIDKKAMY------------------------KAGMVQRVQNEVK   63 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHH------------------------HTTCHHHHHHHHH
T ss_pred             ccccceeeeeecCCCceEEEEEEEc-cCCceEEEEEeehhhhh------------------------hhhHHHHHHHHHH
Confidence            4468999999999999999999854 57899999998421100                        0122467889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++.++||||+++++++...+  .+++++++++++          ..++......++.|++.||.|||+.+   ++|+||
T Consensus        64 ~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl  138 (278)
T 3cok_A           64 IHCQLKHPSILELYNYFEDSN--YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDL  138 (278)
T ss_dssp             HHTTBCCTTBCCEEEEEECSS--EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSC
T ss_pred             HHHhCCCCCeEeEEEEEccCC--eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCC
Confidence            999999999999999998765  788999999764          34677788899999999999999998   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      ||+||+++.++.++|+|||++........  ......||+.|+|||.+.+..++.++||| +|+++|+|++|..||....
T Consensus       139 ~p~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  216 (278)
T 3cok_A          139 TLSNLLLTRNMNIKIADFGLATQLKMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT  216 (278)
T ss_dssp             CGGGEEECTTCCEEECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred             CHHHEEEcCCCCEEEEeecceeeccCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChh
Confidence            99999999999999999999987643221  12345789999999999988899999999 9999999999999975422


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ..    ...   ......       +...    +......+.+++.+||+.||++|||+.++++
T Consensus       217 ~~----~~~---~~~~~~-------~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          217 VK----NTL---NKVVLA-------DYEM----PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             CC------------CCSS-------CCCC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HH----HHH---HHHhhc-------ccCC----ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            11    111   000000       0001    1112234778999999999999999999875


No 201
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=3e-39  Score=290.96  Aligned_cols=252  Identities=19%  Similarity=0.264  Sum_probs=182.7

Q ss_pred             cCCcccc-cccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASL-EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        47 ~~~~~~~-~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      .+.|++. +.||+|+||.||+|+.. .+++.||||.+......                           ....+.+|+.
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~~E~~   62 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINL-ITSQEYAVKIIEKQPGH---------------------------IRSRVFREVE   62 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECS-SSCCEEEEEEEECCSSC---------------------------CHHHHHHHHH
T ss_pred             ceeEEecCceecCCceEEEEEEEEc-CCCcEEEEEEEeeCcch---------------------------hHHHHHHHHH
Confidence            4578885 78999999999999853 57999999999654321                           1456778999


Q ss_pred             HHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      ++.++ +||||+++++++..++  .+++++|++.++++         ++......++.|++.||.|||+.+   ++||||
T Consensus        63 ~l~~~~~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dl  137 (316)
T 2ac3_A           63 MLYQCQGHRNVLELIEFFEEED--RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG---IAHRDL  137 (316)
T ss_dssp             HHHHTCCCTTBCCEEEEEEETT--EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCC
T ss_pred             HHHHhcCCCCeeeEEEEEeeCC--EEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCC
Confidence            99885 7999999999998776  78999999987654         566677789999999999999998   999999


Q ss_pred             CCCCeeecCCCC---eEEeccccceecCCCCc-----ceeccCcccCccccccccccc-----cccCccchhh-HHHHHH
Q 046907          196 NPVNVLLDDDIE---ARISGFGFARAIPDAHT-----HITTSNVVGTVEYIAPEYLQM-----LTLTEKCDIY-FGALLA  261 (345)
Q Consensus       196 k~~nil~~~~~~---~kl~Dfg~a~~~~~~~~-----~~~~~~~~gt~~~~aPE~~~~-----~~~~~~~Dvw-lG~vl~  261 (345)
                      ||+||+++.++.   +||+|||++........     ........||+.|+|||.+.+     ..++.++||| +|+++|
T Consensus       138 kp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~  217 (316)
T 2ac3_A          138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY  217 (316)
T ss_dssp             CGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHH
T ss_pred             CHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHH
Confidence            999999997765   99999999876532211     111223569999999999975     4578999999 999999


Q ss_pred             HHHhCCCCCcccccccchhh--------HHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCH
Q 046907          262 GLVMGKLPSDKFFQHTNEMS--------FVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNS  333 (345)
Q Consensus       262 el~tg~~p~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~  333 (345)
                      +|++|..||...........        ......... .....  .+....    ......+.+++.+||+.||++|||+
T Consensus       218 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~--~~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~  290 (316)
T 2ac3_A          218 ILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQ-EGKYE--FPDKDW----AHISCAAKDLISKLLVRDAKQRLSA  290 (316)
T ss_dssp             HHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHH-HCCCC--CCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HHHHCCCCCcccccccccccccccchhHHHHHHHHHh-ccCcc--cCchhc----ccCCHHHHHHHHHHhhCChhhCCCH
Confidence            99999999865432211110        011111111 11110  000000    0112357889999999999999999


Q ss_pred             HHHHH
Q 046907          334 KDVRR  338 (345)
Q Consensus       334 ~~ll~  338 (345)
                      .++++
T Consensus       291 ~e~l~  295 (316)
T 2ac3_A          291 AQVLQ  295 (316)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99986


No 202
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=2.3e-39  Score=288.83  Aligned_cols=243  Identities=19%  Similarity=0.313  Sum_probs=191.9

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|.+.+.||+|+||.||+|+.. .+++.||+|.+.......                        ....+.+.+|+.
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~~------------------------~~~~~~~~~e~~   67 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLK------------------------PHQREKMSMEIS   67 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCS------------------------HHHHHHHHHHHH
T ss_pred             cccceEEEEEEeecCCEEEEEEEEC-CCCceEEEEEechhhccC------------------------HHHHHHHHHHHH
Confidence            4568999999999999999999864 578999999985422111                        223567788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++..++  .++++++++.++.+         +++.....++.|++.||.|||+.+   ++|+|||
T Consensus        68 ~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~  142 (294)
T 2rku_A           68 IHRSLAHQHVVGFHGFFEDND--FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLK  142 (294)
T ss_dssp             HHHTCCCTTBCCEEEEEECSS--EEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCC
T ss_pred             HHHhCCCCCEeeeeeeeccCC--EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCC
Confidence            999999999999999998766  78999999987643         566777889999999999999998   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      |+||+++.++.+||+|||++........  ......||..|+|||.+.+..++.++||| +|+++|+|++|..||...  
T Consensus       143 p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--  218 (294)
T 2rku_A          143 LGNLFLNEDLEVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--  218 (294)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--
T ss_pred             hHhEEEcCCCCEEEEeccCceecccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--
Confidence            9999999999999999999987643222  22346789999999999998899999999 999999999999997542  


Q ss_pred             ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          276 HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                        ...+....+..   ....       .. .   .....+.+++.+||+.||++|||+.++++
T Consensus       219 --~~~~~~~~~~~---~~~~-------~~-~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          219 --CLKETYLRIKK---NEYS-------IP-K---HINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             --SHHHHHHHHHT---TCCC-------CC-T---TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             --CHHHHHHHHhh---ccCC-------Cc-c---ccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence              22222221111   1110       00 0   11234778899999999999999999876


No 203
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=2.9e-39  Score=309.49  Aligned_cols=255  Identities=24%  Similarity=0.347  Sum_probs=190.0

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++++.||+|+||.||+|+.+ .++..||+|.+.............              ........+.+.+|+.
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~E~~   98 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEK-NGHSEKAIKVIKKSQFDKGRYSDD--------------NKNIEKFHEEIYNEIS   98 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEET-TTCCEEEEEEEEC------------------------------CTHHHHHHHHH
T ss_pred             cccceEEEeEecccCCeEEEEEEEC-CCCcEEEEEEEEhhhccccccccc--------------chhhHHHHHHHHHHHH
Confidence            3568999999999999999999864 578999999997643321110000              0000123567889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++..++  .++++++++.++++         +++..+..++.|++.||.|||+.+   ++|||||
T Consensus        99 ~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlk  173 (504)
T 3q5i_A           99 LLKSLDHPNIIKLFDVFEDKK--YFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHN---IVHRDIK  173 (504)
T ss_dssp             HHHTCCCTTBCCEEEEEECSS--EEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCS
T ss_pred             HHHhCCCCCCCeEEEEEEcCC--EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCc
Confidence            999999999999999998766  78999999988754         567778899999999999999999   9999999


Q ss_pred             CCCeeecCCC---CeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcc
Q 046907          197 PVNVLLDDDI---EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDK  272 (345)
Q Consensus       197 ~~nil~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~  272 (345)
                      |+|||++.++   .+||+|||++.......   ......||+.|+|||++.+ .++.++||| +|+++|+|++|..||..
T Consensus       174 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~  249 (504)
T 3q5i_A          174 PENILLENKNSLLNIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGG  249 (504)
T ss_dssp             GGGEEESSTTCCSSEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             HHHEEEecCCCCccEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence            9999998765   69999999998765432   2244679999999999875 689999999 99999999999999643


Q ss_pred             cccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          273 FFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                          .........+....   ...   +....    ......+.+++..||+.||.+|||+.++++
T Consensus       250 ----~~~~~~~~~i~~~~---~~~---~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          250 ----QNDQDIIKKVEKGK---YYF---DFNDW----KNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             ----SSHHHHHHHHHHCC---CCC---CHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ----CCHHHHHHHHHcCC---CCC---Ccccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                33344444333221   110   00000    011234778999999999999999999875


No 204
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=3e-39  Score=286.69  Aligned_cols=241  Identities=22%  Similarity=0.312  Sum_probs=190.3

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .++..||+|.+......                        .......+.+|+.
T Consensus        12 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~------------------------~~~~~~~~~~e~~   66 (284)
T 2vgo_A           12 TIDDFDIGRPLGKGKFGNVYLAREK-QNKFIMALKVLFKSQLE------------------------KEGVEHQLRREIE   66 (284)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEHHHHH------------------------HTTCHHHHHHHHH
T ss_pred             hhhhceeeheecCCCCeEEEEEEEc-CCCcEEEEEEEcccccc------------------------hHHHHHHHHHHHH
Confidence            4568999999999999999999864 57889999998521100                        0112456788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++...+  .++++++++.++++         ++......++.|++.||.|||+.+   ++|+|||
T Consensus        67 ~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~  141 (284)
T 2vgo_A           67 IQSHLRHPNILRMYNYFHDRK--RIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIK  141 (284)
T ss_dssp             HHHTCCCTTBCCEEEEEECSS--EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCS
T ss_pred             HHhcCCCCCEeeEEEEEEcCC--EEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCC
Confidence            999999999999999998765  78899999987644         566677889999999999999998   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      |+||+++.++.++|+|||++.......    .....|+..|+|||.+.+..++.++||| +|+++|+|++|..||...  
T Consensus       142 p~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--  215 (284)
T 2vgo_A          142 PENLLMGYKGELKIADFGWSVHAPSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP--  215 (284)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECSSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--
T ss_pred             HHHEEEcCCCCEEEecccccccCcccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC--
Confidence            999999999999999999987654322    2346789999999999998899999999 999999999999997532  


Q ss_pred             ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          276 HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                        ........+..   ....       ..    +.....+.+++..||+.||.+|||+.++++
T Consensus       216 --~~~~~~~~~~~---~~~~-------~~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          216 --SHTETHRRIVN---VDLK-------FP----PFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             --SHHHHHHHHHT---TCCC-------CC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --CHhHHHHHHhc---cccC-------CC----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence              22222222211   1100       00    111234778899999999999999999985


No 205
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=1.5e-39  Score=299.74  Aligned_cols=254  Identities=21%  Similarity=0.267  Sum_probs=189.7

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|.+.+.||+|+||.||+|+.. .+|+.||||.+.....+                         ......+.+|+.
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~~E~~   93 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDK-RSGEKVAIKKLSRPFQS-------------------------EIFAKRAYRELL   93 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSTTSS-------------------------HHHHHHHHHHHH
T ss_pred             ccccEEEEeEEecCCCeEEEEEEEC-CCCCEEEEEEecccccc-------------------------hhHHHHHHHHHH
Confidence            3469999999999999999999854 57999999999654322                         223567789999


Q ss_pred             HHhhccCCCccceeEEEecCCcc----eeeeeccccCC------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCH----LLYILNDVSQG------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~----~l~~~~~~~~~------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++.++||||+++++++...+..    ..+++++++.+      +..++...+..++.|++.||.|||+.+   ++||||
T Consensus        94 ~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Di  170 (371)
T 4exu_A           94 LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDL  170 (371)
T ss_dssp             HHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred             HHHhcCCCCchhhhhheeccCCcccceeEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCc
Confidence            99999999999999999876532    24788888875      234788889999999999999999999   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-cccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      ||+||+++.++.+||+|||++......     .....||+.|+|||.+.+ ..++.++||| +|+++|+|++|..||...
T Consensus       171 kp~NIll~~~~~~kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  245 (371)
T 4exu_A          171 KPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK  245 (371)
T ss_dssp             CGGGEEECTTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CHHHeEECCCCCEEEEecCcccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999999999765332     234678999999999987 6789999999 999999999999997532


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCcccc--------------ccccCC----CcHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAID--------------SKLVGN----GCEEQMLLVLKIACFCTLEDPNERPNSKD  335 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~----~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~  335 (345)
                          +..+....+......+... ...              +.....    ..+.....+.+++..||+.||++|||+.+
T Consensus       246 ----~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  320 (371)
T 4exu_A          246 ----DYLDQLTQILKVTGVPGTE-FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ  320 (371)
T ss_dssp             ----SHHHHHHHHHHHHCCCCHH-HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             ----ChHHHHHHHHHHhCCCcHH-HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHH
Confidence                3333333332222111000 000              000000    01122345788999999999999999999


Q ss_pred             HHH
Q 046907          336 VRR  338 (345)
Q Consensus       336 ll~  338 (345)
                      +++
T Consensus       321 ll~  323 (371)
T 4exu_A          321 ALT  323 (371)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            975


No 206
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=1.6e-39  Score=291.39  Aligned_cols=241  Identities=22%  Similarity=0.351  Sum_probs=188.5

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|.+.+.||+|+||.||+|+.. .+|+.||+|.+.....                           .....+.+|+.+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~---------------------------~~~~~~~~e~~~   59 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQR-LTGKLFALKCIKKSPA---------------------------FRDSSLENEIAV   59 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEECC---------------------------------HHHHHHHH
T ss_pred             hccceeeeeccCCCCceEEEEEEC-CCCCEEEEEEEecccc---------------------------cchHHHHHHHHH
Confidence            458999999999999999999864 5799999999964321                           113457789999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++...+  .+++++++++++++         ++......++.|++.||.|||+.+   ++|+||||
T Consensus        60 l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp  134 (304)
T 2jam_A           60 LKKIKHENIVTLEDIYESTT--HYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKP  134 (304)
T ss_dssp             HHHCCCTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCG
T ss_pred             HHhCCCCCeeehhhhcccCC--EEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCH
Confidence            99999999999999988766  78999999987654         456667789999999999999998   99999999


Q ss_pred             CCeee---cCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          198 VNVLL---DDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       198 ~nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      +||++   +.++.++|+|||++......    ......||+.|+|||.+.+..++.++||| +|+++|+|++|..||.. 
T Consensus       135 ~NIl~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~-  209 (304)
T 2jam_A          135 ENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE-  209 (304)
T ss_dssp             GGCEESSSSTTCCEEBCSCSTTCCCCCB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT-
T ss_pred             HHEEEecCCCCCCEEEccCCcceecCCC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC-
Confidence            99999   77889999999998754332    12335689999999999998999999999 99999999999999643 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         .........+.......      ..    .........+.+++..||+.||++|||+.++++
T Consensus       210 ---~~~~~~~~~i~~~~~~~------~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          210 ---ETESKLFEKIKEGYYEF------ES----PFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             ---SCHHHHHHHHHHCCCCC------CT----TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ---CCHHHHHHHHHcCCCCC------Cc----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               22333333333221110      00    111122345778999999999999999999985


No 207
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=6.9e-39  Score=294.61  Aligned_cols=251  Identities=20%  Similarity=0.315  Sum_probs=192.4

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++.+.||+|+||.||+|+++ .+|+.||||.+.........                   .......+.+.+|+.
T Consensus        92 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~g~~vavK~~~~~~~~~~~-------------------~~~~~~~~~~~~E~~  151 (365)
T 2y7j_A           92 FYQKYDPKDVIGRGVSSVVRRCVHR-ATGHEFAVKIMEVTAERLSP-------------------EQLEEVREATRRETH  151 (365)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEETTSSCCCH-------------------HHHHHHHHHHHHHHH
T ss_pred             hhhhcccceEEecCCCEEEEEEEEC-CCCcEEEEEEEEccccccCH-------------------HHHHHHHHHHHHHHH
Confidence            3467999999999999999999864 47999999998654321100                   001233567889999


Q ss_pred             HHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++.+ +||||+++++++...+  ..+++++++.++.+         +++.....++.|++.||.|||+.+   ++|+||
T Consensus       152 ~l~~l~~hp~iv~~~~~~~~~~--~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dl  226 (365)
T 2y7j_A          152 ILRQVAGHPHIITLIDSYESSS--FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDL  226 (365)
T ss_dssp             HHHHHTTCTTBCCEEEEEEBSS--EEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred             HHHHhcCCCCEeEEEEEEeeCC--EEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence            99999 8999999999988765  78999999988654         566677889999999999999998   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccc------ccCccchhh-HHHHHHHHHhCCC
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQML------TLTEKCDIY-FGALLAGLVMGKL  268 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~------~~~~~~Dvw-lG~vl~el~tg~~  268 (345)
                      ||+||+++.++.++|+|||++.......   ......||+.|+|||++.+.      .++.++||| +|+++|+|++|..
T Consensus       227 kp~NIl~~~~~~ikl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~  303 (365)
T 2y7j_A          227 KPENILLDDNMQIRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP  303 (365)
T ss_dssp             SGGGEEECTTCCEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred             CHHHEEECCCCCEEEEecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCC
Confidence            9999999999999999999998765432   22446899999999998643      578899999 9999999999999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ||..    .........+....   ....  .+. ..    .....+.+++..||+.||++|||+.++++
T Consensus       304 pf~~----~~~~~~~~~i~~~~---~~~~--~~~-~~----~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          304 PFWH----RRQILMLRMIMEGQ---YQFS--SPE-WD----DRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             SSCC----SSHHHHHHHHHHTC---CCCC--HHH-HS----SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCC----CCHHHHHHHHHhCC---CCCC--Ccc-cc----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            9643    22223333222211   1000  000 00    11234778999999999999999999986


No 208
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=1.7e-39  Score=319.20  Aligned_cols=251  Identities=21%  Similarity=0.304  Sum_probs=193.5

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecC--CCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPG--QNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      ....++|++.+.||+|+||.||+|++..  ..+..||+|.+.....                          ....+.+.
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~--------------------------~~~~~~~~  439 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS--------------------------DSVREKFL  439 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC--------------------------HHHHHHHH
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC--------------------------HHHHHHHH
Confidence            4456789999999999999999998753  2367899999864321                          12356788


Q ss_pred             HHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +|+.+++.++||||+++++++..+   .++++++++.++++          +++.....++.|++.||.|||+.+   ++
T Consensus       440 ~E~~~l~~l~HpnIv~l~~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---iv  513 (656)
T 2j0j_A          440 QEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR---FV  513 (656)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSS---SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             HHHHHHHhCCCCCCCeEEEEEecC---ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            999999999999999999988543   47889999987654          556667789999999999999998   99


Q ss_pred             ecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh-CCCC
Q 046907          192 HRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM-GKLP  269 (345)
Q Consensus       192 H~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t-g~~p  269 (345)
                      ||||||+|||++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||| +|+++|||++ |..|
T Consensus       514 HrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~P  592 (656)
T 2j0j_A          514 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  592 (656)
T ss_dssp             CSCCSGGGEEEEETTEEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ccccchHhEEEeCCCCEEEEecCCCeecCCCcce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999876443221 22335667899999999988999999999 9999999997 9999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      |...    ...+....+......+.+             +.....+.++|..||+.||++|||+.++++.|+++.
T Consensus       593 f~~~----~~~~~~~~i~~~~~~~~~-------------~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          593 FQGV----KNNDVIGRIENGERLPMP-------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             TTTC----CHHHHHHHHHHTCCCCCC-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCC----CHHHHHHHHHcCCCCCCC-------------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            6532    333343333332211111             112235778999999999999999999999999873


No 209
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=1e-39  Score=309.48  Aligned_cols=252  Identities=20%  Similarity=0.257  Sum_probs=191.3

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|++. .+++.||||.+.....                             ...+..|+.+
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~~vAvK~~~~~~~-----------------------------~~~~~~E~~i   55 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLENVKTK-----------------------------HPQLLYESKI   55 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEET-TTCCEEEEEEEETTCS-----------------------------SCCHHHHHHH
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEEC-CCCcEEEEEEeccccc-----------------------------cHHHHHHHHH
Confidence            478999999999999999999864 5799999998754321                             2235679999


Q ss_pred             HhhccCCCcccee-EEEecCCcceeeeeccccCC---------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          127 VGQIRHRNLHPLL-AHVTRPDCHLLYILNDVSQG---------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       127 l~~l~hpniv~l~-~~~~~~~~~~l~~~~~~~~~---------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      ++.++|++.+..+ .++...+  ..+++++++.+         ...+++..+..++.|++.||.|||+.+   |+|||||
T Consensus        56 l~~L~~~~~i~~i~~~~~~~~--~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIK  130 (483)
T 3sv0_A           56 YRILQGGTGIPNVRWFGVEGD--YNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIK  130 (483)
T ss_dssp             HHHTTTSTTCCCEEEEEEETT--EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCC
T ss_pred             HHHhcCCCCCCeEEEEEeeCC--EEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccC
Confidence            9999875555444 4444433  67889999833         234677788899999999999999999   9999999


Q ss_pred             CCCeee---cCCCCeEEeccccceecCCCCcce-----eccCcccCccccccccccccccCccchhh-HHHHHHHHHhCC
Q 046907          197 PVNVLL---DDDIEARISGFGFARAIPDAHTHI-----TTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGK  267 (345)
Q Consensus       197 ~~nil~---~~~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~  267 (345)
                      |+|||+   +.++.+||+|||+++.........     ......||..|+|||.+.+..++.++||| ||+++|||++|.
T Consensus       131 P~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~  210 (483)
T 3sv0_A          131 PDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGS  210 (483)
T ss_dssp             GGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence            999999   578899999999998775433211     12357899999999999999999999999 999999999999


Q ss_pred             CCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhh
Q 046907          268 LPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQI  343 (345)
Q Consensus       268 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l  343 (345)
                      .||...........+......... .....     +.    ......+.+++..||+.||++||++.+|++.|+++
T Consensus       211 ~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~~-----l~----~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          211 LPWQGLKAGTKKQKYEKISEKKVA-TSIEA-----LC----RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             CTTSSCCCSSHHHHHHHHHHHHHH-SCHHH-----HH----TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             CCCccccchhHHHHHHHHhhcccc-ccHHH-----Hh----cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            998764443333333222222211 11000     00    01123578899999999999999999999999987


No 210
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=1.6e-39  Score=298.34  Aligned_cols=269  Identities=18%  Similarity=0.214  Sum_probs=189.8

Q ss_pred             hHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           42 AFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      +.....++|++.+.||+|+||.||+|+..  +|..||||.+.............                ......+.+.
T Consensus        16 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~----------------~~~~~~~~~~   77 (362)
T 3pg1_A           16 ELHAMQSPYTVQRFISSGSYGAVCAGVDS--EGIPVAIKRVFNTVSDGRTVNIL----------------SDSFLCKRVL   77 (362)
T ss_dssp             HHHHTTCSCEEEEEEEEETTEEEEEEECT--TSCEEEEEEECEECCTTSCEEGG----------------GSHHHHHHHH
T ss_pred             HHHHhccceEEeEEeccCCCEEEEEEECC--CCCeEEEEeccccCCccchhhhh----------------hhhhHHHHHH
Confidence            34557789999999999999999999854  59999999986543321110000                0023357788


Q ss_pred             HHHHHHhhccCCCccceeEEEecC---CcceeeeeccccCCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 046907          122 SEINTVGQIRHRNLHPLLAHVTRP---DCHLLYILNDVSQGR---------RELDWLARHRIALGLACGLEYLHMHHCPR  189 (345)
Q Consensus       122 ~E~~~l~~l~hpniv~l~~~~~~~---~~~~l~~~~~~~~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~  189 (345)
                      +|+.+++.++||||+++++++...   ....++++++++.++         ..+++..+..++.|++.||.|||+.+   
T Consensus        78 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---  154 (362)
T 3pg1_A           78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG---  154 (362)
T ss_dssp             HHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc---
Confidence            999999999999999999988653   334688999998752         24778888999999999999999999   


Q ss_pred             eEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-cccCccchhh-HHHHHHHHHhCC
Q 046907          190 IIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGALLAGLVMGK  267 (345)
Q Consensus       190 iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~vl~el~tg~  267 (345)
                      ++||||||+||+++.++.+||+|||++.......   ......||+.|+|||.+.+ ..++.++||| +|+++|+|++|.
T Consensus       155 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~  231 (362)
T 3pg1_A          155 VVHRDLHPGNILLADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK  231 (362)
T ss_dssp             CCCCCCCGGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CEecCCChHHEEEcCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCC
Confidence            9999999999999999999999999997543322   2234678999999999977 5689999999 999999999999


Q ss_pred             CCCcccccccchhhHHHHHHHHhhhcCCCcc------------------ccccccCCCcHHHHHHHHHHHhhccCCCCCC
Q 046907          268 LPSDKFFQHTNEMSFVKWMRNVMASENPKRA------------------IDSKLVGNGCEEQMLLVLKIACFCTLEDPNE  329 (345)
Q Consensus       268 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~  329 (345)
                      .||...    ........+......+.....                  ..........+.....+.+++..||+.||.+
T Consensus       232 ~pf~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  307 (362)
T 3pg1_A          232 ALFRGS----TFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR  307 (362)
T ss_dssp             CSCCCS----SHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGG
T ss_pred             CCCCCC----CHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhh
Confidence            997542    333333333322211111000                  0000000001122345788999999999999


Q ss_pred             CCCHHHHHH
Q 046907          330 RPNSKDVRR  338 (345)
Q Consensus       330 Rpt~~~ll~  338 (345)
                      |||+.++++
T Consensus       308 Rpt~~ell~  316 (362)
T 3pg1_A          308 RISTEQALR  316 (362)
T ss_dssp             SCCHHHHHT
T ss_pred             CCCHHHHHc
Confidence            999999986


No 211
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=4.9e-39  Score=316.94  Aligned_cols=244  Identities=22%  Similarity=0.281  Sum_probs=191.2

Q ss_pred             hhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      ...++|++++.||+|+||.||+|+.+ .+++.||||.+.....                        ........+..|.
T Consensus       338 ~~~~~f~~~~~LG~G~fG~V~~~~~~-~~~~~vAvK~l~~~~~------------------------~~~~~~~~~~~E~  392 (674)
T 3pfq_A          338 MKLTDFNFLMVLGKGSFGKVMLSERK-GTDELYAVKILKKDVV------------------------IQDDDVECTMVEK  392 (674)
T ss_dssp             --CTTEEEEEESSBTTTBCEEEEEES-SSCCEEEEEEEEHHHH------------------------HHTTTTHHHHHHH
T ss_pred             ccccceEEEEEEccCCCEEEEEEEEC-CCCcEEEEEEEecccc------------------------ccHHHHHHHHHHH
Confidence            35678999999999999999999965 5789999999952110                        0122356677899


Q ss_pred             HHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          125 NTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       125 ~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      .++..+ +||||+++++++...+  .+++++||+.++++         +++..+..++.|++.||.|||+.+   |+|||
T Consensus       393 ~~l~~~~~~~~i~~l~~~~~~~~--~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrD  467 (674)
T 3pfq_A          393 RVLALPGKPPFLTQLHSCFQTMD--RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRD  467 (674)
T ss_dssp             HHHTCTTCCTTBCCEEEECBCSS--EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCC
T ss_pred             HHHHhccCCCeEEEEEEEEEeCC--EEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecc
Confidence            999887 7999999999988766  78999999998755         566667789999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      |||+|||++.++.+||+|||+++.......  ......||+.|+|||++.+..++.++||| +|+++|||++|..||.. 
T Consensus       468 LKp~NILl~~~g~ikL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~-  544 (674)
T 3pfq_A          468 LKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-  544 (674)
T ss_dssp             CCSTTEEECSSSCEEECCCTTCEECCCTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC-
T ss_pred             CChhhEEEcCCCcEEEeecceeeccccCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC-
Confidence            999999999999999999999986433222  24557899999999999999999999999 99999999999999643 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNS-----KDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~-----~~ll~  338 (345)
                         .+..+....+..   ....   +        +......+.+|+..||+.||++||++     .+|++
T Consensus       545 ---~~~~~~~~~i~~---~~~~---~--------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          545 ---EDEDELFQSIME---HNVA---Y--------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             ---SSHHHHHHHHHS---SCCC---C--------CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             ---CCHHHHHHHHHh---CCCC---C--------CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence               233333333322   1111   0        01122347788899999999999997     66653


No 212
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=1.2e-39  Score=288.95  Aligned_cols=247  Identities=22%  Similarity=0.284  Sum_probs=188.8

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++.+.||+|+||.||+|+.. .+|+.||+|.+..........                     ....+.+.+|+.++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~---------------------~~~~~~~~~E~~~l   62 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQK-GTGKEYAAKFIKKRRLSSSRR---------------------GVSREEIEREVNIL   62 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEBCSSTTCSS---------------------SBCHHHHHHHHHHH
T ss_pred             hhhhhHHhhcccCceEEEEEEEc-CCCCeeehHHhhhcccccccc---------------------chHHHHHHHHHHHH
Confidence            57999999999999999999864 578999999987643321110                     01145678899999


Q ss_pred             hhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 046907          128 GQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPV  198 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~  198 (345)
                      ++++||||+++++++..++  ..+++++++.++++         +++.....++.|++.||.|||+.+   ++|+||||+
T Consensus        63 ~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~  137 (283)
T 3bhy_A           63 REIRHPNIITLHDIFENKT--DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPE  137 (283)
T ss_dssp             HHCCCTTBCCEEEEEECSS--EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGG
T ss_pred             HhCCCCCeeehhheecCCC--eEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChH
Confidence            9999999999999998765  68899999987654         566677899999999999999998   999999999


Q ss_pred             CeeecCCC----CeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          199 NVLLDDDI----EARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       199 nil~~~~~----~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      ||+++.++    .++|+|||++........   .....|++.|+|||.+.+..++.++||| +|+++|+|++|..||...
T Consensus       138 Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  214 (283)
T 3bhy_A          138 NIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE  214 (283)
T ss_dssp             GEEESCSSSSSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             HEEEecCCCCCCceEEEecccceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc
Confidence            99998776    799999999987644321   2345789999999999988999999999 999999999999997542


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                          ........+....   ..   .+....    +.....+.+++.+||+.||++|||+.++++
T Consensus       215 ----~~~~~~~~~~~~~---~~---~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          215 ----TKQETLTNISAVN---YD---FDEEYF----SNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             ----SHHHHHHHHHTTC---CC---CCHHHH----TTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ----chHHHHHHhHhcc---cC---Ccchhc----ccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence                2222222222111   00   000000    111234788999999999999999999987


No 213
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=8.3e-39  Score=287.86  Aligned_cols=242  Identities=24%  Similarity=0.360  Sum_probs=185.2

Q ss_pred             hhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           45 EKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      ...++|++.+.||+|+||.||+|++. .+|..||+|.+....                             ....+.+|+
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~-----------------------------~~~~~~~e~   75 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHK-ETGQIVAIKQVPVES-----------------------------DLQEIIKEI   75 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEET-TTCCEEEEEEEETTS-----------------------------CCHHHHHHH
T ss_pred             cchhhhhhheeeccCCCeEEEEEEEC-CCCCEEEEEecCchH-----------------------------HHHHHHHHH
Confidence            45678999999999999999999864 579999999986421                             134567899


Q ss_pred             HHHhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 046907          125 NTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPRIIHRD  194 (345)
Q Consensus       125 ~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~d  194 (345)
                      .+++.++||||+++++++..++  .++++++++++++          .++......++.|++.||.|||+.+   ++|+|
T Consensus        76 ~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~d  150 (314)
T 3com_A           76 SIMQQCDSPHVVKYYGSYFKNT--DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRD  150 (314)
T ss_dssp             HHHHTCCCTTBCCEEEEEEETT--EEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCC
T ss_pred             HHHHhCCCCCCccEEEEEEeCC--EEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCC
Confidence            9999999999999999998766  6889999998743          3566777889999999999999999   99999


Q ss_pred             CCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          195 LNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       195 lk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      |||+||+++.++.++|+|||++........  ......||..|+|||.+.+..++.++||| +|+++|+|++|..||...
T Consensus       151 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  228 (314)
T 3com_A          151 IKAGNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI  228 (314)
T ss_dssp             CSGGGEEECTTCCEEECCCTTCEECBTTBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             cCHHHEEECCCCCEEEeecccchhhhhhcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999999999987654322  22346789999999999998899999999 999999999999997542


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                          ........+.   ....+.. .       ........+.+++..||+.||.+|||+.++++
T Consensus       229 ----~~~~~~~~~~---~~~~~~~-~-------~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          229 ----HPMRAIFMIP---TNPPPTF-R-------KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             ----CHHHHHHHHH---HSCCCCC-S-------SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ----ChHHHHHHHh---cCCCccc-C-------CcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                2222211111   1111100 0       01111235788999999999999999999975


No 214
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=5.1e-39  Score=294.15  Aligned_cols=253  Identities=21%  Similarity=0.261  Sum_probs=189.6

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|.+.+.||+|+||.||+|+.. .+|+.||||.+.....+                         ......+.+|+.+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~~E~~~   76 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDK-RSGEKVAIKKLSRPFQS-------------------------EIFAKRAYRELLL   76 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEESSTTSS-------------------------HHHHHHHHHHHHH
T ss_pred             CceEEEeeeEecCCCeEEEEEEEC-CCCCEEEEEEecccccc-------------------------hHHHHHHHHHHHH
Confidence            468999999999999999999864 57999999999653322                         2235677899999


Q ss_pred             HhhccCCCccceeEEEecCCcc----eeeeeccccCC------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCH----LLYILNDVSQG------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~----~l~~~~~~~~~------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      ++.++||||+++++++...+..    .++++++++.+      +..++...+..++.|++.||.|||+.+   ++|||||
T Consensus        77 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlk  153 (353)
T 3coi_A           77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLK  153 (353)
T ss_dssp             HHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCC
T ss_pred             HHhcCCCCcccHhheEecccccccceeEEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCC
Confidence            9999999999999998876532    35788888864      224678888999999999999999998   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-cccCccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      |+||+++.++.+||+|||++......     .....||+.|+|||.+.+ ..++.++||| +|+++|+|++|..||... 
T Consensus       154 p~NIl~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~-  227 (353)
T 3coi_A          154 PGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK-  227 (353)
T ss_dssp             GGGEEECTTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS-
T ss_pred             HHHEeECCCCcEEEeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC-
Confidence            99999999999999999999764322     234678999999999987 5688999999 999999999999997542 


Q ss_pred             cccchhhHHHHHHHHhhhcCC------------------CccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENP------------------KRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDV  336 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~l  336 (345)
                         +..+....+......+..                  ..... .......+.....+.+++.+||+.||++|||+.++
T Consensus       228 ---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~  303 (353)
T 3coi_A          228 ---DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR-KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA  303 (353)
T ss_dssp             ---CHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSS-CCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             ---CHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCC-ccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHH
Confidence               223333333222111100                  00000 00111122334567889999999999999999999


Q ss_pred             HH
Q 046907          337 RR  338 (345)
Q Consensus       337 l~  338 (345)
                      ++
T Consensus       304 l~  305 (353)
T 3coi_A          304 LT  305 (353)
T ss_dssp             HT
T ss_pred             hc
Confidence            75


No 215
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=5.4e-40  Score=296.18  Aligned_cols=253  Identities=23%  Similarity=0.310  Sum_probs=189.5

Q ss_pred             hhHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           41 LAFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQI  120 (345)
Q Consensus        41 ~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (345)
                      .+|....++|++.+.||+|+||.||+|+++    ..+|+|.+........                         ..+.+
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~----~~~avk~~~~~~~~~~-------------------------~~~~~   76 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWH----GEVAIRLIDIERDNED-------------------------QLKAF   76 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEEES----SSEEEEECCCCSCCCC-------------------------CCCCC
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEEEc----CeEEEEEeecCCCCHH-------------------------HHHHH
Confidence            456678899999999999999999999864    2499999875432211                         13345


Q ss_pred             HHHHHHHhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          121 QSEINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       121 ~~E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      .+|+.+++.++||||+++++++..++  .++++++++.+++          .+++.....++.|++.||.|||+.+   +
T Consensus        77 ~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i  151 (319)
T 2y4i_B           77 KREVMAYRQTRHENVVLFMGACMSPP--HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---I  151 (319)
T ss_dssp             CTTGGGGTTCCCTTBCCCCEEEECSS--CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT---C
T ss_pred             HHHHHHHhcCCCCCEeEEEEEEecCC--ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            67899999999999999999998776  5888999987642          4677888999999999999999998   9


Q ss_pred             EecCCCCCCeeecCCCCeEEeccccceecCCCCc---ceeccCcccCccccccccccc---------cccCccchhh-HH
Q 046907          191 IHRDLNPVNVLLDDDIEARISGFGFARAIPDAHT---HITTSNVVGTVEYIAPEYLQM---------LTLTEKCDIY-FG  257 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~~gt~~~~aPE~~~~---------~~~~~~~Dvw-lG  257 (345)
                      +|+||||+||+++ ++.++|+|||++........   ........|+..|+|||.+.+         ..++.++||| +|
T Consensus       152 ~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG  230 (319)
T 2y4i_B          152 LHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALG  230 (319)
T ss_dssp             CCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHH
T ss_pred             cccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHH
Confidence            9999999999998 67999999999875432111   112234568999999999975         3478899999 99


Q ss_pred             HHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 046907          258 ALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVR  337 (345)
Q Consensus       258 ~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll  337 (345)
                      +++|+|++|..||...    ........+..........    ..        ....+.+++..||+.||++|||+.+++
T Consensus       231 ~il~el~~g~~p~~~~----~~~~~~~~~~~~~~~~~~~----~~--------~~~~l~~li~~~l~~~p~~Rpt~~~l~  294 (319)
T 2y4i_B          231 TIWYELHAREWPFKTQ----PAEAIIWQMGTGMKPNLSQ----IG--------MGKEISDILLFCWAFEQEERPTFTKLM  294 (319)
T ss_dssp             HHHHHHHHSSCSSSSC----CHHHHHHHHHTTCCCCCCC----SS--------CCTTHHHHHHHHHCSSTTTSCCHHHHH
T ss_pred             HHHHHHHhCCCCCCCC----CHHHHHHHhccCCCCCCCc----CC--------CCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence            9999999999997532    2233332222221111111    01        112378899999999999999999999


Q ss_pred             HHHhhhh
Q 046907          338 RMLSQIQ  344 (345)
Q Consensus       338 ~~L~~l~  344 (345)
                      +.|+++.
T Consensus       295 ~~l~~l~  301 (319)
T 2y4i_B          295 DMLEKLP  301 (319)
T ss_dssp             HHHTTC-
T ss_pred             HHHHHHH
Confidence            9999874


No 216
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=3.4e-39  Score=295.14  Aligned_cols=259  Identities=19%  Similarity=0.251  Sum_probs=191.1

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++.+.||+|+||.||+|++. .+|+.||||.+.....                          ......+.+|+.
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~--------------------------~~~~~~~~~E~~   61 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHK-PTGEIVAIKKIEPFDK--------------------------PLFALRTLREIK   61 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCCSS--------------------------HHHHHHHHHHHH
T ss_pred             cccceEEeeEEcCCCCeEEEEEEEC-CCCcEEEEEeeccccc--------------------------chHHHHHHHHHH
Confidence            3579999999999999999999864 5799999999964321                          123556778999


Q ss_pred             HHhhccCCCccceeEEEecCC---cceeeeeccccCCC-------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPD---CHLLYILNDVSQGR-------RELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~---~~~l~~~~~~~~~~-------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++.++||||+++++++..+.   ....+++++++.+.       ..++...+..++.|++.||.|||+.+   ++||||
T Consensus        62 ~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dl  138 (353)
T 2b9h_A           62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDL  138 (353)
T ss_dssp             HHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred             HHHhCcCCCcCCeeeeecccccCccceEEEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCC
Confidence            999999999999999876542   24678899998752       34677788899999999999999998   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcc--------eeccCcccCccccccccccc-cccCccchhh-HHHHHHHHHh
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTH--------ITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGALLAGLVM  265 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~vl~el~t  265 (345)
                      ||+||+++.++.+||+|||++.........        .......||+.|+|||++.+ ..++.++||| +|+++|+|++
T Consensus       139 kp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  218 (353)
T 2b9h_A          139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL  218 (353)
T ss_dssp             CGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHh
Confidence            999999999999999999999876532211        01233578999999998765 5689999999 9999999999


Q ss_pred             CCCCCcccccccchhhHHHHHHHHhhhcCCCccccc-------------cccCC-----CcHHHHHHHHHHHhhccCCCC
Q 046907          266 GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDS-------------KLVGN-----GCEEQMLLVLKIACFCTLEDP  327 (345)
Q Consensus       266 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-----~~~~~~~~l~~li~~Cl~~dp  327 (345)
                      |..||...    +.......+......+........             ...+.     ..+.....+.+++..||+.||
T Consensus       219 g~~pf~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  294 (353)
T 2b9h_A          219 RRPIFPGR----DYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP  294 (353)
T ss_dssp             SSCSCCCS----SHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCCCCCC----CcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCc
Confidence            99997542    333333333332222111000000             00000     011223457789999999999


Q ss_pred             CCCCCHHHHHH
Q 046907          328 NERPNSKDVRR  338 (345)
Q Consensus       328 ~~Rpt~~~ll~  338 (345)
                      ++|||+.++++
T Consensus       295 ~~Rpt~~ell~  305 (353)
T 2b9h_A          295 AKRITAKEALE  305 (353)
T ss_dssp             GGSCCHHHHHT
T ss_pred             ccCCCHHHHhc
Confidence            99999999986


No 217
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=1.5e-38  Score=288.76  Aligned_cols=249  Identities=18%  Similarity=0.296  Sum_probs=191.2

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|.....++..||||.+...                            ......+.+|+.+
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----------------------------~~~~~~~~~e~~~   64 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----------------------------DRYCEAARSEIQV   64 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----------------------------HHHHHHHHHHHHH
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----------------------------CchhHHHHHHHHH
Confidence            469999999999999999999865567899999999642                            1224566788888


Q ss_pred             HhhccCCC------ccceeEEEecCCcceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          127 VGQIRHRN------LHPLLAHVTRPDCHLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       127 l~~l~hpn------iv~l~~~~~~~~~~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      ++.++|+|      ++++++++...+  .++++++++.+.          ..++...+..++.|++.||.|||+.+   +
T Consensus        65 l~~l~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i  139 (339)
T 1z57_A           65 LEHLNTTDPNSTFRCVQMLEWFEHHG--HICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---L  139 (339)
T ss_dssp             HHHHHHHCTTCTTCBCCEEEEEEETT--EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             HHHhhhcCCCCceeeEeeecccccCC--cEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---C
Confidence            88887665      999999998776  788999998431          13567778899999999999999998   9


Q ss_pred             EecCCCCCCeeecC-------------------CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCcc
Q 046907          191 IHRDLNPVNVLLDD-------------------DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEK  251 (345)
Q Consensus       191 iH~dlk~~nil~~~-------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~  251 (345)
                      +||||||+||+++.                   ++.+||+|||++......     .....||+.|+|||.+.+..++.+
T Consensus       140 vH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~  214 (339)
T 1z57_A          140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQP  214 (339)
T ss_dssp             ECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTH
T ss_pred             cCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcc
Confidence            99999999999987                   668999999999865432     234678999999999999899999


Q ss_pred             chhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCcccc------------------------------
Q 046907          252 CDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAID------------------------------  300 (345)
Q Consensus       252 ~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------  300 (345)
                      +||| +|+++|||++|..||...    +..+....+....... +.....                              
T Consensus       215 ~Di~slG~il~el~~g~~pf~~~----~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (339)
T 1z57_A          215 CDVWSIGCILIEYYLGFTVFPTH----DSKEHLAMMERILGPL-PKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK  289 (339)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCS----CHHHHHHHHHHHHCSC-CHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCC
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHHHhCCC-CHHHHhhccchhHHhhccccccccccccchhhhcCc
Confidence            9999 999999999999997542    3333333333332211 100000                              


Q ss_pred             -ccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          301 -SKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       301 -~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                       ..............+.+++..||+.||.+|||+.++++
T Consensus       290 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          290 PLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             CGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             chhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence             00001112345567889999999999999999999985


No 218
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=4.1e-39  Score=285.78  Aligned_cols=235  Identities=20%  Similarity=0.298  Sum_probs=183.8

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|++. .+++.||+|.+.......                         .....+.+|+..
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~e~~~   63 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKR-LDGCIYAIKRSKKPLAGS-------------------------VDEQNALREVYA   63 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCCTTS-------------------------HHHHHHHHHHHH
T ss_pred             cchhhhhhhhcCCCceEEEEEEEc-CCCceEEEEEeccccccc-------------------------HHHHHHHHHHHH
Confidence            468999999999999999999864 579999999997543331                         124567789999


Q ss_pred             Hhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC-------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 046907          127 VGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------------LDWLARHRIALGLACGLEYLHMHHCPRIIH  192 (345)
Q Consensus       127 l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH  192 (345)
                      +..+ +||||+++++++..++  .+++++++++++++             +++..+..++.|++.||.|||+.+   ++|
T Consensus        64 ~~~l~~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH  138 (289)
T 1x8b_A           64 HAVLGQHSHVVRYFSAWAEDD--HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVH  138 (289)
T ss_dssp             HHHSCSCTTBCCEEEEEEETT--EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EEC
T ss_pred             HHHhCCCCCeeeeeeeeecCC--eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---Eee
Confidence            9998 9999999999998776  78899999988654             566677789999999999999998   999


Q ss_pred             cCCCCCCeeecC-------------------CCCeEEeccccceecCCCCcceeccCcccCcccccccccccc-ccCccc
Q 046907          193 RDLNPVNVLLDD-------------------DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQML-TLTEKC  252 (345)
Q Consensus       193 ~dlk~~nil~~~-------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~-~~~~~~  252 (345)
                      |||||+||+++.                   ...++++|||.+.......      ...||..|+|||.+.+. .++.++
T Consensus       139 ~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~  212 (289)
T 1x8b_A          139 MDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKA  212 (289)
T ss_dssp             SCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHH
T ss_pred             cCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchh
Confidence            999999999984                   4479999999998765432      24689999999999876 466899


Q ss_pred             hhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCC
Q 046907          253 DIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERP  331 (345)
Q Consensus       253 Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rp  331 (345)
                      ||| +|+++|+|++|..|+...       .....+...   ..+      ...    ......+.+++..||+.||++||
T Consensus       213 Di~slG~il~~l~~~~~~~~~~-------~~~~~~~~~---~~~------~~~----~~~~~~~~~li~~~l~~dp~~Rp  272 (289)
T 1x8b_A          213 DIFALALTVVCAAGAEPLPRNG-------DQWHEIRQG---RLP------RIP----QVLSQEFTELLKVMIHPDPERRP  272 (289)
T ss_dssp             HHHHHHHHHHHHTTCCCCCSSS-------HHHHHHHTT---CCC------CCS----SCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             hHHHHHHHHHHHhcCCCCCcch-------hHHHHHHcC---CCC------CCC----cccCHHHHHHHHHHhCCCcccCC
Confidence            999 999999999998774221       111111111   111      001    11123477888999999999999


Q ss_pred             CHHHHHH
Q 046907          332 NSKDVRR  338 (345)
Q Consensus       332 t~~~ll~  338 (345)
                      |+.++++
T Consensus       273 s~~~ll~  279 (289)
T 1x8b_A          273 SAMALVK  279 (289)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhh
Confidence            9999975


No 219
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=1.1e-39  Score=302.89  Aligned_cols=250  Identities=19%  Similarity=0.242  Sum_probs=185.8

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ...+|.+.+.||+|+||.||+|++.  .+..+|+|.+.....                               ...+|+.
T Consensus        38 ~~~~Y~~~~~lG~G~~g~V~~a~~~--~~~~~aikk~~~~~~-------------------------------~~~~E~~   84 (394)
T 4e7w_A           38 REIAYTNCKVIGNGSFGVVFQAKLV--ESDEVAIKKVLQDKR-------------------------------FKNRELQ   84 (394)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEET--TTEEEEEEEEECCTT-------------------------------SCCHHHH
T ss_pred             ccceEEEeEEEeeCCCeEEEEEEEC--CCCeEEEEEEecCcc-------------------------------hHHHHHH
Confidence            3457999999999999999999865  344589998854321                               1125899


Q ss_pred             HHhhccCCCccceeEEEecCC----cceeeeeccccCCC------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPD----CHLLYILNDVSQGR------------RELDWLARHRIALGLACGLEYLHMHHCPR  189 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~----~~~l~~~~~~~~~~------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~  189 (345)
                      +++.++||||+++++++...+    ..+++++++|++++            ..++...+..++.|++.||.|||+.+   
T Consensus        85 il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---  161 (394)
T 4e7w_A           85 IMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---  161 (394)
T ss_dssp             HHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            999999999999999886533    34578999999763            35677788899999999999999999   


Q ss_pred             eEecCCCCCCeeec-CCCCeEEeccccceecCCCCcceeccCcccCcccccccccccc-ccCccchhh-HHHHHHHHHhC
Q 046907          190 IIHRDLNPVNVLLD-DDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQML-TLTEKCDIY-FGALLAGLVMG  266 (345)
Q Consensus       190 iiH~dlk~~nil~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~-~~~~~~Dvw-lG~vl~el~tg  266 (345)
                      ++||||||+|||++ .++.+||+|||+++.......   .....||+.|+|||.+.+. .++.++||| +|+++|||++|
T Consensus       162 ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g  238 (394)
T 4e7w_A          162 ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG  238 (394)
T ss_dssp             EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred             ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            99999999999999 789999999999987644322   2346789999999999765 489999999 99999999999


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCc-------ccc---ccccCC-----CcHHHHHHHHHHHhhccCCCCCCCC
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKR-------AID---SKLVGN-----GCEEQMLLVLKIACFCTLEDPNERP  331 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~~~-----~~~~~~~~l~~li~~Cl~~dp~~Rp  331 (345)
                      ..||.+.    +..+....+......+....       ...   +.....     ..+.....+.+++.+||+.||.+||
T Consensus       239 ~~pf~~~----~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  314 (394)
T 4e7w_A          239 QPLFPGE----SGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARL  314 (394)
T ss_dssp             SCSSCCS----SHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred             CCCCCCC----CHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCC
Confidence            9997542    33333222222221111000       000   000000     0111234578899999999999999


Q ss_pred             CHHHHHH
Q 046907          332 NSKDVRR  338 (345)
Q Consensus       332 t~~~ll~  338 (345)
                      |+.++++
T Consensus       315 t~~e~l~  321 (394)
T 4e7w_A          315 TAIEALC  321 (394)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhc
Confidence            9999986


No 220
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=5.9e-39  Score=286.11  Aligned_cols=243  Identities=22%  Similarity=0.305  Sum_probs=183.6

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|.....||+|+||.||+|++. .++..||+|.+.....                           ...+.+.+|+.
T Consensus        20 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~---------------------------~~~~~~~~e~~   71 (295)
T 2clq_A           20 EYDENGDRVVLGKGTYGIVYAGRDL-SNQVRIAIKEIPERDS---------------------------RYSQPLHEEIA   71 (295)
T ss_dssp             CBCTTSSBCEEEECSSSEEEEEEET-TTCCEEEEEEEECCCC------------------------------HHHHHHHH
T ss_pred             cccCCCCcEEEeecCcEEEEEEEEC-CCCeEEEEEEccCCch---------------------------HHHHHHHHHHH
Confidence            4556666679999999999999864 5789999999865421                           12456788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE------------LDWLARHRIALGLACGLEYLHMHHCPRIIHR  193 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~------------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~  193 (345)
                      +++.++||||+++++++...+  .++++++++.++.+            ++......++.|++.||.|||+.+   ++|+
T Consensus        72 ~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~  146 (295)
T 2clq_A           72 LHKHLKHKNIVQYLGSFSENG--FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHR  146 (295)
T ss_dssp             HHHTCCCTTBCCEEEEEEETT--EEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECC
T ss_pred             HHHhCCCCCEeeEeeEEEeCC--cEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEcc
Confidence            999999999999999998776  68889999876533            345566778999999999999998   9999


Q ss_pred             CCCCCCeeecC-CCCeEEeccccceecCCCCcceeccCcccCccccccccccccc--cCccchhh-HHHHHHHHHhCCCC
Q 046907          194 DLNPVNVLLDD-DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLT--LTEKCDIY-FGALLAGLVMGKLP  269 (345)
Q Consensus       194 dlk~~nil~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~--~~~~~Dvw-lG~vl~el~tg~~p  269 (345)
                      ||||+||+++. ++.++|+|||++........  ......|+..|+|||.+.+..  ++.++||| +|+++|+|++|..|
T Consensus       147 dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p  224 (295)
T 2clq_A          147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP  224 (295)
T ss_dssp             CCSGGGEEEETTTCCEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCT
T ss_pred             CCChhhEEEECCCCCEEEeecccccccCCCCC--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            99999999987 88999999999987643221  223467899999999997654  78899999 99999999999999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      |.....    ... ...........+      .    .+......+.+++..||+.||++|||+.++++
T Consensus       225 f~~~~~----~~~-~~~~~~~~~~~~------~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          225 FYELGE----PQA-AMFKVGMFKVHP------E----IPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             TGGGSS----HHH-HHHHHHHHCCCC------C----CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             ccCCCc----hhH-HHHhhccccccc------c----ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            754211    111 111111111110      0    11112234778889999999999999999975


No 221
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.7e-39  Score=290.98  Aligned_cols=245  Identities=22%  Similarity=0.361  Sum_probs=183.1

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ....++|++.+.||+|+||.||+|++. .+|..||||.+......                            ...+.+|
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~----------------------------~~~~~~e   70 (326)
T 2x7f_A           20 RDPAGIFELVELVGNGTYGQVYKGRHV-KTGQLAAIKVMDVTGDE----------------------------EEEIKQE   70 (326)
T ss_dssp             CCCTTTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCSST----------------------------THHHHHH
T ss_pred             cCCCCcEEEEEEeccCCCEEEEEEEEC-CCCCeEEEEEEecCccc----------------------------HHHHHHH
Confidence            346789999999999999999999864 57899999998653221                            3456789


Q ss_pred             HHHHhhc-cCCCccceeEEEecCC----cceeeeeccccCCCC-----------CCCHHHHHHHHHHHHHHHHHHhhcCC
Q 046907          124 INTVGQI-RHRNLHPLLAHVTRPD----CHLLYILNDVSQGRR-----------ELDWLARHRIALGLACGLEYLHMHHC  187 (345)
Q Consensus       124 ~~~l~~l-~hpniv~l~~~~~~~~----~~~l~~~~~~~~~~~-----------~l~~~~~~~i~~~i~~~l~~lh~~~~  187 (345)
                      +.+++++ +||||+++++++...+    ...++++++++.+++           .++......++.|++.||.|||+.+ 
T Consensus        71 ~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-  149 (326)
T 2x7f_A           71 INMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-  149 (326)
T ss_dssp             HHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-
Confidence            9999998 8999999999998743    347899999998754           3566667889999999999999998 


Q ss_pred             CCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccc-----ccccCccchhh-HHHHHH
Q 046907          188 PRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ-----MLTLTEKCDIY-FGALLA  261 (345)
Q Consensus       188 ~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~-----~~~~~~~~Dvw-lG~vl~  261 (345)
                        ++|+||||+||+++.++.+||+|||++........  ......||+.|+|||.+.     +..++.++||| +|+++|
T Consensus       150 --ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~  225 (326)
T 2x7f_A          150 --VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAI  225 (326)
T ss_dssp             --CCCCCCSGGGEEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHH
T ss_pred             --ccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHH
Confidence              99999999999999999999999999876543211  223457899999999997     45688999999 999999


Q ss_pred             HHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          262 GLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       262 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      +|++|..||...    ........+   .....+.      ......   ...+.+++..||+.||.+|||+.++++
T Consensus       226 ~l~~g~~p~~~~----~~~~~~~~~---~~~~~~~------~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          226 EMAEGAPPLCDM----HPMRALFLI---PRNPAPR------LKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHHSSCTTTTS----CHHHHHHHH---HHSCCCC------CSCSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHhCCCCCCCC----cHHHHHHHh---hcCcccc------CCcccc---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            999999997432    222222211   1111111      011111   234778889999999999999999986


No 222
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=1.7e-39  Score=290.60  Aligned_cols=243  Identities=21%  Similarity=0.320  Sum_probs=184.5

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|++. .++..||+|.+....                           ......+.+|+.
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~---------------------------~~~~~~~~~e~~   68 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNK-ETGALAAAKVIETKS---------------------------EEELEDYIVEIE   68 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEET-TTCCEEEEEEEC-------------------------------CCHHHHHHHHH
T ss_pred             CccceeecceeccCCCeEEEEEEEc-CCCcEEEEEEecCCC---------------------------HHHHHHHHHHHH
Confidence            5678999999999999999999964 578999999985431                           112566788999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRR----------ELDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++.++||||+++++++..++  .+++++++++++.          .++......++.|++.||.|||+.+   ++|+||
T Consensus        69 ~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl  143 (302)
T 2j7t_A           69 ILATCDHPYIVKLLGAYYHDG--KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDL  143 (302)
T ss_dssp             HHHHCCCTTBCCEEEEEECC---CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCC
T ss_pred             HHhcCCCCCEeeeeeeeeeCC--eEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCC
Confidence            999999999999999998765  6888999998753          3677778899999999999999998   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccc-----ccccCccchhh-HHHHHHHHHhCCCC
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ-----MLTLTEKCDIY-FGALLAGLVMGKLP  269 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~-----~~~~~~~~Dvw-lG~vl~el~tg~~p  269 (345)
                      ||+||+++.++.+||+|||++.......  .......||..|+|||.+.     +..++.++||| +|+++|+|++|..|
T Consensus       144 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p  221 (302)
T 2j7t_A          144 KAGNVLMTLEGDIRLADFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP  221 (302)
T ss_dssp             SGGGEEECTTSCEEECCCHHHHHHHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CHHHEEECCCCCEEEEECCCCccccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999875432110  1123357899999999983     56688999999 99999999999999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      |...    .......   .......+....        .......+.+++..||+.||++|||+.++++
T Consensus       222 ~~~~----~~~~~~~---~~~~~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          222 HHEL----NPMRVLL---KIAKSDPPTLLT--------PSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             TTTS----CHHHHHH---HHHHSCCCCCSS--------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             CccC----CHHHHHH---HHhccCCcccCC--------ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            7542    2222222   121111111100        1112234778999999999999999999875


No 223
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=3e-39  Score=292.66  Aligned_cols=244  Identities=19%  Similarity=0.230  Sum_probs=186.9

Q ss_pred             cCCcccc-cccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASL-EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        47 ~~~~~~~-~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      .+.|.+. +.||+|+||.||+|+.. .+++.||+|.+.......                         .....+.+|+.
T Consensus        27 ~~~y~~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~-------------------------~~~~~~~~e~~   80 (327)
T 3lm5_A           27 NNFYILTSKELGRGKFAVVRQCISK-STGQEYAAKFLKKRRRGQ-------------------------DCRAEILHEIA   80 (327)
T ss_dssp             HHHEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEESEETTE-------------------------ECHHHHHHHHH
T ss_pred             hhEEeeccceeCCCCCeEEEEEEEC-CCCCEEEEEEEehhhcch-------------------------HHHHHHHHHHH
Confidence            4467776 78999999999999864 579999999987543221                         11456778999


Q ss_pred             HHhhc-cCCCccceeEEEecCCcceeeeeccccCCCC-----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 046907          126 TVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRR-----------ELDWLARHRIALGLACGLEYLHMHHCPRIIHR  193 (345)
Q Consensus       126 ~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~-----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~  193 (345)
                      +++.+ +||||+++++++..++  .++++++++.++.           .+++..+..++.|++.||.|||+.+   ++||
T Consensus        81 ~l~~l~~~~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~  155 (327)
T 3lm5_A           81 VLELAKSCPRVINLHEVYENTS--EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHL  155 (327)
T ss_dssp             HHHHTTTCTTBCCEEEEEECSS--EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECS
T ss_pred             HHHhccCCCCEEEEEEEEEeCC--eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecC
Confidence            99998 5799999999998766  6889999998753           3677788899999999999999999   9999


Q ss_pred             CCCCCCeeecC---CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCC
Q 046907          194 DLNPVNVLLDD---DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP  269 (345)
Q Consensus       194 dlk~~nil~~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p  269 (345)
                      ||||+||+++.   ++.+||+|||++........   .....||+.|+|||.+.+..++.++||| +|+++|+|++|..|
T Consensus       156 Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  232 (327)
T 3lm5_A          156 DLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP  232 (327)
T ss_dssp             CCCGGGEEESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCChHHEEEecCCCCCcEEEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            99999999997   78999999999987654321   2346799999999999999999999999 99999999999999


Q ss_pred             CcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          270 SDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      |...    ........+........          ..........+.+++..||+.||++|||+.++++
T Consensus       233 f~~~----~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          233 FVGE----DNQETYLNISQVNVDYS----------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             SCCS----SHHHHHHHHHHTCCCCC----------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCC----CchHHHHHHHhcccccC----------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            7432    22222222222211110          0111122344778899999999999999999875


No 224
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=1.3e-38  Score=284.36  Aligned_cols=252  Identities=19%  Similarity=0.263  Sum_probs=193.2

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      -.++|++.+.||+|+||.||+|+.+ .+|+.||||.+..........                  .......+.+.+|+.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~------------------~~~~~~~~~~~~e~~   75 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHK-PTCKEYAVKIIDVTGGGSFSA------------------EEVQELREATLKEVD   75 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEETTCSTTCCH------------------HHHHHHHHHHHHHHH
T ss_pred             hhhccceeeeecCCCceEEEEEEEc-CcCceEEEEEEecccccccCH------------------HHHHHHHHHHHHHHH
Confidence            4579999999999999999999864 578999999996543211000                  001234567889999


Q ss_pred             HHhhcc-CCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 046907          126 TVGQIR-HRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDL  195 (345)
Q Consensus       126 ~l~~l~-hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dl  195 (345)
                      +++++. ||||+++++++..++  ..+++++++.++++         ++......++.|++.||.|||+.+   ++|+||
T Consensus        76 ~l~~l~~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl  150 (298)
T 1phk_A           76 ILRKVSGHPNIIQLKDTYETNT--FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDL  150 (298)
T ss_dssp             HHHHHTTCTTBCCEEEEEECSS--EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred             HHHHhcCCCCEeeeeeeeccCC--eEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCC
Confidence            999995 999999999998765  78999999987654         566677889999999999999998   999999


Q ss_pred             CCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccc------ccccCccchhh-HHHHHHHHHhCCC
Q 046907          196 NPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ------MLTLTEKCDIY-FGALLAGLVMGKL  268 (345)
Q Consensus       196 k~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~------~~~~~~~~Dvw-lG~vl~el~tg~~  268 (345)
                      ||+||+++.++.++|+|||++.......   ......|++.|+|||.+.      ...++.++||| +|+++|+|++|..
T Consensus       151 ~p~Nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~  227 (298)
T 1phk_A          151 KPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP  227 (298)
T ss_dssp             SGGGEEECTTCCEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CcceEEEcCCCcEEEecccchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCC
Confidence            9999999999999999999998765432   223467899999999985      34578899999 9999999999999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ||..    .........+........          ..........+.+++.+||+.||.+|||+.++++
T Consensus       228 p~~~----~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          228 PFWH----RKQMLMLRMIMSGNYQFG----------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             SSCC----SSHHHHHHHHHHTCCCCC----------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCcC----ccHHHHHHHHhcCCcccC----------cccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            9643    222333222222111100          0111222345788999999999999999999975


No 225
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=6.1e-39  Score=283.39  Aligned_cols=242  Identities=25%  Similarity=0.393  Sum_probs=182.6

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|++. .+|+.||||.+......                        .......+.+|+.
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~------------------------~~~~~~~~~~e~~   63 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQ-LTGHKVAVKILNRQKIR------------------------SLDVVGKIKREIQ   63 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHH------------------------HTTCHHHHHHHHH
T ss_pred             eeccEEEEeeecCCCCeEEEEEEEC-CCCceEEEEEecccccc------------------------chhHHHHHHHHHH
Confidence            4579999999999999999999864 57899999998521100                        0122557888999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++.++||||+++++++..++  ..+++++++.++++         ++......++.|++.||.|||+.+   ++|+|||
T Consensus        64 ~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~  138 (276)
T 2h6d_A           64 NLKLFRHPHIIKLYQVISTPT--DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLK  138 (276)
T ss_dssp             HHHTCCCTTBCCEEEEEECSS--EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCC
T ss_pred             HHhcCCCCCEeEEEEEEecCC--eEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCC
Confidence            999999999999999988765  78899999987654         566677889999999999999999   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc-Cccchhh-HHHHHHHHHhCCCCCcccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL-TEKCDIY-FGALLAGLVMGKLPSDKFF  274 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~-~~~~Dvw-lG~vl~el~tg~~p~~~~~  274 (345)
                      |+||+++.++.++|+|||++........   .....|++.|+|||.+.+..+ +.++||| +|+++|+|++|..||... 
T Consensus       139 p~Nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-  214 (276)
T 2h6d_A          139 PENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-  214 (276)
T ss_dssp             GGGEEECTTSCEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-
T ss_pred             hhhEEECCCCCEEEeecccccccCCCcc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC-
Confidence            9999999999999999999976644321   234578999999999988765 6899999 999999999999997532 


Q ss_pred             cccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          275 QHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         ........+....   ..   .    . .   .....+.+++..||+.||++|||+.++++
T Consensus       215 ---~~~~~~~~~~~~~---~~---~----~-~---~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          215 ---HVPTLFKKIRGGV---FY---I----P-E---YLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             ---SHHHHHHHHHHCC---CC---C----C-T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---cHHHHHHHhhcCc---cc---C----c-h---hcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence               2223333222211   00   0    0 1   11234778899999999999999999986


No 226
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=9.2e-39  Score=287.58  Aligned_cols=247  Identities=20%  Similarity=0.350  Sum_probs=181.1

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ....++|++++.||+|+||.||+|+..  ++..||||.+.....+                         ......+.+|
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~-------------------------~~~~~~~~~E   76 (313)
T 3cek_A           24 SVKGRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEAD-------------------------NQTLDSYRNE   76 (313)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEECT--TCCEEEEEEEECSSCC-------------------------HHHHHHHHHH
T ss_pred             eeccceEEEEEEecCCCCEEEEEEEcC--CCcEEEEEEecccccc-------------------------ccchHHHHHH
Confidence            346678999999999999999999864  6889999999654322                         2235678899


Q ss_pred             HHHHhhcc--CCCccceeEEEecCCcceeeeeccccCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 046907          124 INTVGQIR--HRNLHPLLAHVTRPDCHLLYILNDVSQG--------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHR  193 (345)
Q Consensus       124 ~~~l~~l~--hpniv~l~~~~~~~~~~~l~~~~~~~~~--------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~  193 (345)
                      +.++++++  ||||+++++++..++  .+++++++..+        ...++...+..++.|++.||.|||+.+   ++||
T Consensus        77 ~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~  151 (313)
T 3cek_A           77 IAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHS  151 (313)
T ss_dssp             HHHHHHHGGGCTTBCCEEEEEECSS--EEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCC
T ss_pred             HHHHHhccccCCceEEEEEEeecCC--EEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceec
Confidence            99999996  599999999998776  67888884432        234677788899999999999999998   9999


Q ss_pred             CCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc-----------cccCccchhh-HHHHHH
Q 046907          194 DLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM-----------LTLTEKCDIY-FGALLA  261 (345)
Q Consensus       194 dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~-----------~~~~~~~Dvw-lG~vl~  261 (345)
                      ||||+||+++. +.+||+|||++................||+.|+|||.+.+           ..++.++||| +|+++|
T Consensus       152 dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~  230 (313)
T 3cek_A          152 DLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY  230 (313)
T ss_dssp             CCCGGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHH
T ss_pred             CCCcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHH
Confidence            99999999975 7899999999987654332222344678999999999975           4678899999 999999


Q ss_pred             HHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          262 GLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       262 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      +|++|..||.....   ..   ..+.......... ..     +...   ...+.+++..||+.||.+|||+.++++
T Consensus       231 el~~g~~pf~~~~~---~~---~~~~~~~~~~~~~-~~-----~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          231 YMTYGKTPFQQIIN---QI---SKLHAIIDPNHEI-EF-----PDIP---EKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             HHHHSSCTTTTCCS---HH---HHHHHHHCTTSCC-CC-----CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHhCCCchhhHHH---HH---HHHHHHHhccccc-CC-----cccc---hHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            99999999754322   11   1111111111100 00     0111   234778889999999999999999985


No 227
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=1.8e-39  Score=293.37  Aligned_cols=250  Identities=22%  Similarity=0.317  Sum_probs=184.9

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.. .+++.||||.+..........                   ........+.+|+.+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~-------------------~~~~~~~~~~~E~~~   68 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFER-KTCKKVAIKIISKRKFAIGSA-------------------READPALNVETEIEI   68 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECC----------------------------------CHHHHHHH
T ss_pred             hhceeEeeEEecCCCEEEEEEEEc-CCCcEEEEEEeehhhhhhccc-------------------ccchhhhhHHHHHHH
Confidence            358999999999999999999864 578999999996532211000                   001224567889999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      ++.++||||+++++++..++   .+++++++.++++         ++......++.|++.||.|||+.+   ++||||||
T Consensus        69 l~~l~h~~i~~~~~~~~~~~---~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp  142 (322)
T 2ycf_A           69 LKKLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKP  142 (322)
T ss_dssp             HHHCCCTTBCCEEEEEESSS---EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred             HHhCCCCCCceEeeEEcCCc---eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCH
Confidence            99999999999999987654   7888999987543         567778899999999999999998   99999999


Q ss_pred             CCeeecCCCC---eEEeccccceecCCCCcceeccCcccCcccccccccc---ccccCccchhh-HHHHHHHHHhCCCCC
Q 046907          198 VNVLLDDDIE---ARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ---MLTLTEKCDIY-FGALLAGLVMGKLPS  270 (345)
Q Consensus       198 ~nil~~~~~~---~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~---~~~~~~~~Dvw-lG~vl~el~tg~~p~  270 (345)
                      +||+++.++.   +||+|||++.......   ......||+.|+|||.+.   ...++.++||| +|+++|+|++|..||
T Consensus       143 ~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf  219 (322)
T 2ycf_A          143 ENVLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF  219 (322)
T ss_dssp             GGEEESSSSSSCCEEECCCTTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             HHEEEecCCCCCeEEEccCccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            9999986554   9999999998765432   123357899999999974   45688999999 999999999999997


Q ss_pred             cccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          271 DKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ......   ......+.......      .+...    ......+.+++.+||+.||++|||+.++++
T Consensus       220 ~~~~~~---~~~~~~~~~~~~~~------~~~~~----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          220 SEHRTQ---VSLKDQITSGKYNF------IPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             CSTTCS---SCHHHHHHHTCCCC------CHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cccchH---HHHHHHHHhCcccc------Cchhh----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            543221   22333332211100      00000    112245788999999999999999999875


No 228
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=2.5e-38  Score=289.16  Aligned_cols=249  Identities=18%  Similarity=0.250  Sum_probs=190.8

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.....+..||+|.+...                            ......+.+|+.+
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----------------------------~~~~~~~~~E~~~   69 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----------------------------GKYREAARLEINV   69 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----------------------------HHHHHHHHHHHHH
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----------------------------ccchhHHHHHHHH
Confidence            469999999999999999999875444579999999642                            1224566788999


Q ss_pred             HhhccCCC------ccceeEEEecCCcceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          127 VGQIRHRN------LHPLLAHVTRPDCHLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       127 l~~l~hpn------iv~l~~~~~~~~~~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      ++.++|++      ++.+++++...+  .++++++++.++          ..+++..+..++.|++.||.|||+.+   +
T Consensus        70 l~~l~~~~~~~~~~~~~~~~~~~~~~--~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i  144 (355)
T 2eu9_A           70 LKKIKEKDKENKFLCVLMSDWFNFHG--HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---L  144 (355)
T ss_dssp             HHHHHHHCTTSCSCBCCEEEEEEETT--EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---E
T ss_pred             HHHHhhcCCCCceeEEEeeeeeeeCC--eEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---c
Confidence            98887766      889999888776  788999998652          24677888899999999999999998   9


Q ss_pred             EecCCCCCCeee-------------------cCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCcc
Q 046907          191 IHRDLNPVNVLL-------------------DDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEK  251 (345)
Q Consensus       191 iH~dlk~~nil~-------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~  251 (345)
                      +||||||+|||+                   +.++.+||+|||++......     .....||+.|+|||++.+..++.+
T Consensus       145 vH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~  219 (355)
T 2eu9_A          145 THTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQP  219 (355)
T ss_dssp             ECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTH
T ss_pred             ccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCc
Confidence            999999999999                   56789999999999864432     234678999999999999899999


Q ss_pred             chhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccc----------c--------------------
Q 046907          252 CDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAI----------D--------------------  300 (345)
Q Consensus       252 ~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--------------------  300 (345)
                      +||| +|+++|||++|..||..    .........+...... .+....          .                    
T Consensus       220 ~Di~slG~il~el~~g~~pf~~----~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (355)
T 2eu9_A          220 CDVWSIGCILFEYYRGFTLFQT----HENREHLVMMEKILGP-IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK  294 (355)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCC----SSHHHHHHHHHHHHCC-CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCC
T ss_pred             cchHHHHHHHHHHHhCCCCCCC----CCHHHHHHHHHHHcCC-CcHHHhhhccchhhhcccccccccccchhccccccCC
Confidence            9999 99999999999999753    2333333333333221 111000          0                    


Q ss_pred             -ccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          301 -SKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       301 -~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                       ..............+.+++..||+.||++|||+.++++
T Consensus       295 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          295 PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             CGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence             00000112234557889999999999999999999974


No 229
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=3.4e-39  Score=292.17  Aligned_cols=250  Identities=21%  Similarity=0.347  Sum_probs=169.6

Q ss_pred             hHHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           42 AFLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQ  121 (345)
Q Consensus        42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (345)
                      .|....++|++++.||+|+||.||+|+.. .+|+.||||.+......                          .....+.
T Consensus        16 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~--------------------------~~~~~~~   68 (327)
T 3aln_A           16 HWDFTAEDLKDLGEIGRGAYGSVNKMVHK-PSGQIMAVKRIRSTVDE--------------------------KEQKQLL   68 (327)
T ss_dssp             EECCCSCSEEC-CEEEECSSEEEEEEEET-TTTEEEEEEEEECCCCH--------------------------HHHHHHH
T ss_pred             hcccCHHHhhehheeccCCCEEEEEEEEc-CCCCEEEEEEeecccCc--------------------------hHHHHHH
Confidence            34556789999999999999999999864 57999999999754221                          1133444


Q ss_pred             HHHH-HHhhccCCCccceeEEEecCCcceeeeeccccCCC-------------CCCCHHHHHHHHHHHHHHHHHHhhc-C
Q 046907          122 SEIN-TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGR-------------RELDWLARHRIALGLACGLEYLHMH-H  186 (345)
Q Consensus       122 ~E~~-~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~-------------~~l~~~~~~~i~~~i~~~l~~lh~~-~  186 (345)
                      .|+. +++.++||||+++++++..++  ..+++++++.++             ..+++.....++.|++.||.|||+. +
T Consensus        69 ~e~~~~~~~~~h~niv~~~~~~~~~~--~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~  146 (327)
T 3aln_A           69 MDLDVVMRSSDCPYIVQFYGALFREG--DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK  146 (327)
T ss_dssp             HHHHHHHSSCCCTTBCCEEEEEECSS--EEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHcCCCCcEeeeeeEEEeCC--ceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC
Confidence            5555 677789999999999998776  688899998762             3467777889999999999999998 8


Q ss_pred             CCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccc----cccccCccchhh-HHHHHH
Q 046907          187 CPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYL----QMLTLTEKCDIY-FGALLA  261 (345)
Q Consensus       187 ~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~----~~~~~~~~~Dvw-lG~vl~  261 (345)
                         ++||||||+||+++.++.+||+|||++.......   ......||..|+|||.+    .+..++.++||| +|+++|
T Consensus       147 ---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~  220 (327)
T 3aln_A          147 ---IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLY  220 (327)
T ss_dssp             ---CCCSCCCGGGEEEETTTEEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHH
T ss_pred             ---EeECCCCHHHEEEcCCCCEEEccCCCceeccccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHH
Confidence               9999999999999999999999999997654332   12234789999999999    455688999999 999999


Q ss_pred             HHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          262 GLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       262 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      +|++|..||......      ...+........      +.+...........+.+++..||+.||++|||+.++++
T Consensus       221 ~l~~g~~pf~~~~~~------~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          221 ELATGRFPYPKWNSV------FDQLTQVVKGDP------PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             HHHHSCCCSSCC-------------CCCCCSCC------CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHCCCCCCCcchH------HHHHHHHhcCCC------CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            999999997542110      011111111100      11111111122345778889999999999999999975


No 230
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=2.2e-40  Score=305.91  Aligned_cols=235  Identities=16%  Similarity=0.140  Sum_probs=176.0

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI--  124 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~--  124 (345)
                      .++|++.+.||+|+||.||+|++. .+|+.||||.+.......                        ....+.+.+|+  
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~------------------------~~~~~~~~~E~~~  126 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQ-ETGESFEVHVPYFTERPP------------------------SNAIKQMKEEVLR  126 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC--CCCCEEEEEEEEECC-CC------------------------TTHHHHHHHHHHG
T ss_pred             CceEEEcceeecCCCEEEEEEEEC-CCCcEEEEEEEeeccccc------------------------hHHHHHHHHHHHH
Confidence            578999999999999999999864 579999999996432211                        12356678899  


Q ss_pred             -HHHhhccCCCcccee-------EEEecCCc------------c---eeeeeccccCCCCCCCH----------------
Q 046907          125 -NTVGQIRHRNLHPLL-------AHVTRPDC------------H---LLYILNDVSQGRRELDW----------------  165 (345)
Q Consensus       125 -~~l~~l~hpniv~l~-------~~~~~~~~------------~---~l~~~~~~~~~~~~l~~----------------  165 (345)
                       .+++.++||||++++       +++..++.            .   ..++++|++. |++.++                
T Consensus       127 l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~l~~  205 (377)
T 3byv_A          127 LRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVH  205 (377)
T ss_dssp             GGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCS-EEHHHHHHHHHHTTTTTHHHHH
T ss_pred             HHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccC-CCHHHHHHhccccccccccccH
Confidence             455556899999998       66554431            1   2678899994 444332                


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc
Q 046907          166 LARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM  245 (345)
Q Consensus       166 ~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~  245 (345)
                      ..+..++.|++.||.|||+.+   ++||||||+|||++.++.+||+|||+++....     ......| +.|+|||++.+
T Consensus       206 ~~~~~i~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~  276 (377)
T 3byv_A          206 HARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEAR  276 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcc
Confidence            445579999999999999999   99999999999999999999999999986432     2234677 99999999998


Q ss_pred             c-----------ccCccchhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHH
Q 046907          246 L-----------TLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQML  313 (345)
Q Consensus       246 ~-----------~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (345)
                      .           .++.++||| ||+++|||++|..||........                ......      ..+....
T Consensus       277 ~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~----------------~~~~~~------~~~~~~~  334 (377)
T 3byv_A          277 RATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG----------------SEWIFR------SCKNIPQ  334 (377)
T ss_dssp             HTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC----------------SGGGGS------SCCCCCH
T ss_pred             cccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc----------------hhhhhh------hccCCCH
Confidence            7           799999999 99999999999999754221110                000000      0011123


Q ss_pred             HHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          314 LVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       314 ~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .+.++|..||+.||++|||+.++++
T Consensus       335 ~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          335 PVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHHHHHHHHcCCCchhCCCHHHHhh
Confidence            4778899999999999999999985


No 231
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-39  Score=298.91  Aligned_cols=251  Identities=20%  Similarity=0.296  Sum_probs=188.3

Q ss_pred             hcCCcccccccccCcceeeEEEEec--CCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELP--GQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ..++|++.+.||+|+||.||+|+..  ..+++.||||.+........                       ......+.+|
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~-----------------------~~~~~~~~~E  108 (355)
T 1vzo_A           52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK-----------------------AKTTEHTRTE  108 (355)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEE-----------------------ESSGGGCCCH
T ss_pred             cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhh-----------------------hhHHHHHHHH
Confidence            3468999999999999999999863  24789999999864321100                       0012345568


Q ss_pred             HHHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 046907          124 INTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHR  193 (345)
Q Consensus       124 ~~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~  193 (345)
                      +.+++.+ +||||+++++++..++  .++++++|+.++++         ++......++.|++.||.|||+.+   ++||
T Consensus       109 ~~~l~~l~~h~~iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~  183 (355)
T 1vzo_A          109 RQVLEHIRQSPFLVTLHYAFQTET--KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG---IIYR  183 (355)
T ss_dssp             HHHHHHHHTCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCC
T ss_pred             HHHHHHccCCCceeEEEEEEeeCc--eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccC
Confidence            9999999 6999999999998776  68899999988654         556667789999999999999998   9999


Q ss_pred             CCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccc--ccCccchhh-HHHHHHHHHhCCCCC
Q 046907          194 DLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQML--TLTEKCDIY-FGALLAGLVMGKLPS  270 (345)
Q Consensus       194 dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~--~~~~~~Dvw-lG~vl~el~tg~~p~  270 (345)
                      ||||+|||++.++.+||+|||+++....... .......||+.|+|||.+.+.  .++.++||| +|+++|||++|..||
T Consensus       184 Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf  262 (355)
T 1vzo_A          184 DIKLENILLDSNGHVVLTDFGLSKEFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF  262 (355)
T ss_dssp             CCCGGGEEECTTSCEEESCSSEEEECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CCCHHHEEECCCCcEEEeeCCCCeecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence            9999999999999999999999986543222 122346799999999999863  478899999 999999999999998


Q ss_pred             cccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 046907          271 DKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERP-----NSKDVRRM  339 (345)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rp-----t~~~ll~~  339 (345)
                      .............   .........           .+......+.+++..||+.||.+||     |+.++++.
T Consensus       263 ~~~~~~~~~~~~~---~~~~~~~~~-----------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          263 TVDGEKNSQAEIS---RRILKSEPP-----------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             SCTTSCCCHHHHH---HHHHHCCCC-----------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             ccCCccchHHHHH---HHHhccCCC-----------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            6433222222222   222211111           1111223477889999999999999     89988763


No 232
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=3.8e-39  Score=291.51  Aligned_cols=258  Identities=19%  Similarity=0.279  Sum_probs=189.8

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|++...+|+.||+|.+.........                         ...+.+|+.
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------~~~~~~e~~   63 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM-------------------------PLSTIREVA   63 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSC-------------------------BCTHHHHHH
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccC-------------------------CchhhHHHH
Confidence            5579999999999999999999975467899999998643322110                         122345666


Q ss_pred             HHhhc---cCCCccceeEEEec---CCcceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 046907          126 TVGQI---RHRNLHPLLAHVTR---PDCHLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHMHHCPR  189 (345)
Q Consensus       126 ~l~~l---~hpniv~l~~~~~~---~~~~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~  189 (345)
                      +++.+   +||||+++++++..   +....++++++++.+.          ..+++..+..++.|++.||.|||+.+   
T Consensus        64 ~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---  140 (326)
T 1blx_A           64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---  140 (326)
T ss_dssp             HHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            66555   89999999998862   2345788999998752          22677788899999999999999999   


Q ss_pred             eEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCC
Q 046907          190 IIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKL  268 (345)
Q Consensus       190 iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~  268 (345)
                      ++|+||||+||+++.++.+||+|||++.......   ......||..|+|||.+.+..++.++||| +|+++|+|++|..
T Consensus       141 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  217 (326)
T 1blx_A          141 VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP  217 (326)
T ss_dssp             CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ceeccCCHHHeEEcCCCCEEEecCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999997654221   23446789999999999998999999999 9999999999999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCcc----------cc---ccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRA----------ID---SKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKD  335 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~---~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~  335 (345)
                      ||...    ........+......+.....          ..   ........+.....+.+++.+||+.||.+|||+.+
T Consensus       218 pf~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  293 (326)
T 1blx_A          218 LFRGS----SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS  293 (326)
T ss_dssp             SCCCS----SHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             CCCCC----CHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHH
Confidence            96532    333333333332221110000          00   00000111223345778999999999999999999


Q ss_pred             HHH
Q 046907          336 VRR  338 (345)
Q Consensus       336 ll~  338 (345)
                      +++
T Consensus       294 ~l~  296 (326)
T 1blx_A          294 ALS  296 (326)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            984


No 233
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=4.6e-38  Score=290.94  Aligned_cols=249  Identities=19%  Similarity=0.203  Sum_probs=188.5

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.. .+++.||||.+....                            .....+..|+.+
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~----------------------------~~~~~~~~e~~~  103 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDR-VEQEWVAIKIIKNKK----------------------------AFLNQAQIEVRL  103 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEECSSH----------------------------HHHHHHHHHHHH
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEc-CCCcEEEEEEEeccH----------------------------HHHHHHHHHHHH
Confidence            468999999999999999999854 578999999996421                            124456677888


Q ss_pred             Hhhcc-CC-----CccceeEEEecCCcceeeeeccccCCC----------CCCCHHHHHHHHHHHHHHHHHHhh--cCCC
Q 046907          127 VGQIR-HR-----NLHPLLAHVTRPDCHLLYILNDVSQGR----------RELDWLARHRIALGLACGLEYLHM--HHCP  188 (345)
Q Consensus       127 l~~l~-hp-----niv~l~~~~~~~~~~~l~~~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lh~--~~~~  188 (345)
                      ++.++ |+     +|+++++++...+  .++++++++++.          ..+++.....++.|++.||.|||+  .+  
T Consensus       104 l~~l~~~~~~~~~~iv~~~~~~~~~~--~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~--  179 (382)
T 2vx3_A          104 LELMNKHDTEMKYYIVHLKRHFMFRN--HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS--  179 (382)
T ss_dssp             HHHHHHCSSGGGGGBCCEEEEEEETT--EEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC--
T ss_pred             HHHHHhcccccceeEEEeeeeeccCC--ceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC--
Confidence            87774 44     4999999988776  788999998752          236777888999999999999995  55  


Q ss_pred             CeEecCCCCCCeeec--CCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHh
Q 046907          189 RIIHRDLNPVNVLLD--DDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVM  265 (345)
Q Consensus       189 ~iiH~dlk~~nil~~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~t  265 (345)
                       |+||||||+|||++  .++.+||+|||++......     .....||+.|+|||++.+..++.++||| +|+++|||++
T Consensus       180 -ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  253 (382)
T 2vx3_A          180 -IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT  253 (382)
T ss_dssp             -EECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             -EEcCCCCcccEEEecCCCCcEEEEeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHh
Confidence             99999999999995  5778999999999876432     2346789999999999999999999999 9999999999


Q ss_pred             CCCCCcccccccchhhHHHHHHHHhhhcCCC-----------------ccc------------ccc--------------
Q 046907          266 GKLPSDKFFQHTNEMSFVKWMRNVMASENPK-----------------RAI------------DSK--------------  302 (345)
Q Consensus       266 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~------------~~~--------------  302 (345)
                      |..||..    .+..+....+......+...                 ...            .+.              
T Consensus       254 g~~pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  329 (382)
T 2vx3_A          254 GEPLFSG----ANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETG  329 (382)
T ss_dssp             SSCSSCC----SSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTT
T ss_pred             CCCCCCC----CCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhcccc
Confidence            9999653    23333333333332211100                 000            000              


Q ss_pred             -------ccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          303 -------LVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       303 -------~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                             -.......+...+.+|+.+||+.||++|||+.++++
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~  372 (382)
T 2vx3_A          330 GPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQ  372 (382)
T ss_dssp             SGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhc
Confidence                   000112344567899999999999999999999975


No 234
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=3.4e-38  Score=287.95  Aligned_cols=267  Identities=17%  Similarity=0.265  Sum_probs=190.7

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|++   +|+.||+|.+...............          ............+.+|+.
T Consensus        29 ~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~E~~   95 (348)
T 2pml_X           29 YINDYRIIRTLNQGKFNKIILCEK---DNKFYALKKYEKSLLEKKRDFTKSN----------NDKISIKSKYDDFKNELQ   95 (348)
T ss_dssp             EETTEEEEEEEECCSSCCEEEEEE---TTEEEEEEEEEHHHHSSCEEECCCS----------SSSCCEEEHHHHHHHHHH
T ss_pred             ccCceEEEEEEcCCCCeEEEEEEc---CCceEEEEEeecccccchhhhcccc----------chhhhHHhHHHHHHHHHH
Confidence            357999999999999999999986   7999999998532111000000000          000000001267889999


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC-----------------CCHHHHHHHHHHHHHHHHHHhh-cCC
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-----------------LDWLARHRIALGLACGLEYLHM-HHC  187 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-----------------l~~~~~~~i~~~i~~~l~~lh~-~~~  187 (345)
                      +++.++||||+++++++..++  .+++++++++++++                 +++..+..++.|++.||.|||+ .+ 
T Consensus        96 ~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-  172 (348)
T 2pml_X           96 IITDIKNEYCLTCEGIITNYD--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-  172 (348)
T ss_dssp             HHTTCCCTTBCCCSEEEESSS--EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-
T ss_pred             HHHhCCCCCcceEEEEEeeCC--eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-
Confidence            999999999999999998776  68889999877433                 5567788999999999999999 88 


Q ss_pred             CCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccccc-ccCc-cchhh-HHHHHHHHH
Q 046907          188 PRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQML-TLTE-KCDIY-FGALLAGLV  264 (345)
Q Consensus       188 ~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~-~~~~-~~Dvw-lG~vl~el~  264 (345)
                        ++|+||||+||+++.++.++|+|||.+......    ......|+..|+|||.+.+. .++. ++||| +|+++|+|+
T Consensus       173 --i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~  246 (348)
T 2pml_X          173 --ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF  246 (348)
T ss_dssp             --EECCCCCGGGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHH
T ss_pred             --EeecCCChHhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHH
Confidence              999999999999999999999999999876443    23456789999999999887 5666 99999 999999999


Q ss_pred             hCCCCCcccccccchhhHHHHHHHHhhhcCCC--cccccccc----CCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          265 MGKLPSDKFFQHTNEMSFVKWMRNVMASENPK--RAIDSKLV----GNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       265 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      +|..||.....   .......+..... ..+.  ........    ..........+.+++..||+.||.+|||+.++++
T Consensus       247 ~g~~pf~~~~~---~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          247 YNVVPFSLKIS---LVELFNNIRTKNI-EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HSSCSSCCSSC---SHHHHHHHTSCCC-CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hCCCCCCCCCc---HHHHHHHHhccCc-CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            99999754222   1233322221110 0000  00000000    0001223345788999999999999999999986


No 235
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=3.1e-38  Score=284.44  Aligned_cols=248  Identities=19%  Similarity=0.323  Sum_probs=172.3

Q ss_pred             HHhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           43 FLEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQS  122 (345)
Q Consensus        43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (345)
                      +....++|++++.||+|+||.||+|+++ .+|+.||||.+.......                         ...+.+..
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~-------------------------~~~~~~~~   73 (318)
T 2dyl_A           20 YQAEINDLENLGEMGSGTCGQVWKMRFR-KTGHVIAVKQMRRSGNKE-------------------------ENKRILMD   73 (318)
T ss_dssp             EECCGGGEEEEEEC------CEEEEEET-TTCCEEEEEEEETTSCHH-------------------------HHHHHHHH
T ss_pred             hhhhhccccccceeeecCCeeEEEEEEe-cCCeEEEEEEecccccch-------------------------HHHHHHHH
Confidence            3446679999999999999999999864 578999999996543221                         11233344


Q ss_pred             HHHHHhhccCCCccceeEEEecCCcceeeeeccccCC---------CCCCCHHHHHHHHHHHHHHHHHHhhc-CCCCeEe
Q 046907          123 EINTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQG---------RRELDWLARHRIALGLACGLEYLHMH-HCPRIIH  192 (345)
Q Consensus       123 E~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~---------~~~l~~~~~~~i~~~i~~~l~~lh~~-~~~~iiH  192 (345)
                      +..+++.++||||+++++++..++  .++++++++.+         ...++......++.|++.||.|||+. +   ++|
T Consensus        74 ~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H  148 (318)
T 2dyl_A           74 LDVVLKSHDCPYIVQCFGTFITNT--DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG---VIH  148 (318)
T ss_dssp             HHHHHHTTTCTTBCCEEEEEECSS--EEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCC
T ss_pred             HHHHHHhcCCCceeeEEEEEecCC--cEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEe
Confidence            556678889999999999998776  68889998843         23467778889999999999999995 8   999


Q ss_pred             cCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCcccccccccc-----ccccCccchhh-HHHHHHHHHhC
Q 046907          193 RDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQ-----MLTLTEKCDIY-FGALLAGLVMG  266 (345)
Q Consensus       193 ~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~-----~~~~~~~~Dvw-lG~vl~el~tg  266 (345)
                      +||||+||+++.++.+||+|||++........   .....||+.|+|||.+.     +..++.++||| +|+++|+|++|
T Consensus       149 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g  225 (318)
T 2dyl_A          149 RDVKPSNILLDERGQIKLCDFGISGRLVDDKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG  225 (318)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCHHHEEECCCCCEEEEECCCchhccCCcc---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhC
Confidence            99999999999999999999999976543321   23457899999999994     45678899999 99999999999


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ..||....   ........+..   ...+....        .......+.+++..||+.||.+|||+.++++
T Consensus       226 ~~pf~~~~---~~~~~~~~~~~---~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          226 QFPYKNCK---TDFEVLTKVLQ---EEPPLLPG--------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             SCTTTTCC---SHHHHHHHHHH---SCCCCCCS--------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCCCCCC---ccHHHHHHHhc---cCCCCCCc--------cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            99975421   22222222221   11111000        0011234778889999999999999999875


No 236
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=3.2e-38  Score=290.66  Aligned_cols=255  Identities=20%  Similarity=0.275  Sum_probs=188.5

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++.+.||+|+||.||+|+.. .+++.||||.+....                            .....+.+|+.
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~----------------------------~~~~~~~~e~~   67 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDM-VNNTHVAMKIVRGDK----------------------------VYTEAAEDEIK   67 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSCH----------------------------HHHHHHHHHHH
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEec-CCCcEEEEEEecCCc----------------------------cchhhhhHHHH
Confidence            4579999999999999999999854 579999999996431                            12345667888


Q ss_pred             HHhhcc-----------CCCccceeEEEecC--CcceeeeeccccCC----------CCCCCHHHHHHHHHHHHHHHHHH
Q 046907          126 TVGQIR-----------HRNLHPLLAHVTRP--DCHLLYILNDVSQG----------RRELDWLARHRIALGLACGLEYL  182 (345)
Q Consensus       126 ~l~~l~-----------hpniv~l~~~~~~~--~~~~l~~~~~~~~~----------~~~l~~~~~~~i~~~i~~~l~~l  182 (345)
                      ++++++           ||||+++++++...  +...++++++++.+          ...++...+..++.|++.||.||
T Consensus        68 ~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l  147 (373)
T 1q8y_A           68 LLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYM  147 (373)
T ss_dssp             HHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHH
Confidence            887775           89999999988754  34467888988832          12367777889999999999999


Q ss_pred             hhc-CCCCeEecCCCCCCeeec------CCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh
Q 046907          183 HMH-HCPRIIHRDLNPVNVLLD------DDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY  255 (345)
Q Consensus       183 h~~-~~~~iiH~dlk~~nil~~------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw  255 (345)
                      |+. +   ++||||||+|||++      ..+.+||+|||++......     .....||+.|+|||++.+..++.++|||
T Consensus       148 H~~~~---ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~  219 (373)
T 1q8y_A          148 HRRCG---IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIW  219 (373)
T ss_dssp             HHTTC---EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHH
T ss_pred             HhcCC---EEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHH
Confidence            998 8   99999999999994      3447999999999876432     2345789999999999999999999999


Q ss_pred             -HHHHHHHHHhCCCCCccccccc--chhhHHHHHHHHhhhcCCCccc--------------------cc---------cc
Q 046907          256 -FGALLAGLVMGKLPSDKFFQHT--NEMSFVKWMRNVMASENPKRAI--------------------DS---------KL  303 (345)
Q Consensus       256 -lG~vl~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------------------~~---------~~  303 (345)
                       +|+++|||++|..||.......  ........+....... +....                    ..         ..
T Consensus       220 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (373)
T 1q8y_A          220 STACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL-PSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE  298 (373)
T ss_dssp             HHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSC-CHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCC-CHHHHhccchhhhhcCCcchhcccccccccchhhhhhh
Confidence             9999999999999986433211  1112222222222111 00000                    00         00


Q ss_pred             cCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          304 VGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       304 ~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ...........+.+++..||+.||++|||+.++++
T Consensus       299 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          299 KYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             TTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             cccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence            11234567788999999999999999999999986


No 237
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=4e-38  Score=283.70  Aligned_cols=257  Identities=20%  Similarity=0.291  Sum_probs=181.9

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++++.||+|+||.||+|+.. .+++.||+|.+....                           ....+.+.+|+.+
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------------------~~~~~~~~~e~~~   61 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDN-DCDKRVAIKKIVLTD---------------------------PQSVKHALREIKI   61 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEET-TTTEEEEEEEEECCS---------------------------HHHHHHHHHHHHH
T ss_pred             CCceeEEEEeccCCCeEEEEEEEC-CCCeEEEEEEEecCC---------------------------hHHHHHHHHHHHH
Confidence            568999999999999999999864 579999999986432                           2235677899999


Q ss_pred             HhhccCCCccceeEEEecC------------CcceeeeeccccCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 046907          127 VGQIRHRNLHPLLAHVTRP------------DCHLLYILNDVSQG-------RRELDWLARHRIALGLACGLEYLHMHHC  187 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~------------~~~~l~~~~~~~~~-------~~~l~~~~~~~i~~~i~~~l~~lh~~~~  187 (345)
                      ++.++||||+++++++..+            ....++++++++.+       ...++......++.|++.||.|||+.+ 
T Consensus        62 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-  140 (320)
T 2i6l_A           62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSAN-  140 (320)
T ss_dssp             HHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCC-
Confidence            9999999999999987543            22467889999874       234677778899999999999999999 


Q ss_pred             CCeEecCCCCCCeeec-CCCCeEEeccccceecCCCCc-ceeccCcccCccccccccccc-cccCccchhh-HHHHHHHH
Q 046907          188 PRIIHRDLNPVNVLLD-DDIEARISGFGFARAIPDAHT-HITTSNVVGTVEYIAPEYLQM-LTLTEKCDIY-FGALLAGL  263 (345)
Q Consensus       188 ~~iiH~dlk~~nil~~-~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~gt~~~~aPE~~~~-~~~~~~~Dvw-lG~vl~el  263 (345)
                        ++||||||+||+++ .++.+||+|||++........ ........+|..|+|||.+.+ ..++.++||| +|+++|||
T Consensus       141 --i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el  218 (320)
T 2i6l_A          141 --VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM  218 (320)
T ss_dssp             --CBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHH
T ss_pred             --EecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHH
Confidence              99999999999997 567899999999986543211 112234567899999998865 5689999999 99999999


Q ss_pred             HhCCCCCcccccccchhhHHHHHHHHhhhcCC----------Ccccccccc-C-----CCcHHHHHHHHHHHhhccCCCC
Q 046907          264 VMGKLPSDKFFQHTNEMSFVKWMRNVMASENP----------KRAIDSKLV-G-----NGCEEQMLLVLKIACFCTLEDP  327 (345)
Q Consensus       264 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~-~-----~~~~~~~~~l~~li~~Cl~~dp  327 (345)
                      ++|..||...    ........+.........          ......... +     ...+.....+.+++.+||+.||
T Consensus       219 ~~g~~pf~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  294 (320)
T 2i6l_A          219 LTGKTLFAGA----HELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSP  294 (320)
T ss_dssp             HHSSCSSCCS----SHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSG
T ss_pred             HhCCCCCCCC----CHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCc
Confidence            9999997542    222222222211100000          000000000 0     0011223457889999999999


Q ss_pred             CCCCCHHHHHH
Q 046907          328 NERPNSKDVRR  338 (345)
Q Consensus       328 ~~Rpt~~~ll~  338 (345)
                      ++|||+.++++
T Consensus       295 ~~Rpt~~ell~  305 (320)
T 2i6l_A          295 MDRLTAEEALS  305 (320)
T ss_dssp             GGSCCHHHHHT
T ss_pred             cccCCHHHHhC
Confidence            99999999976


No 238
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=1.5e-38  Score=284.18  Aligned_cols=244  Identities=24%  Similarity=0.389  Sum_probs=179.8

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++++.||+|+||.||+|+.. .+++.||||.+...                            ......+.+|+.+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~----------------------------~~~~~~~~~E~~~   55 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNA-LDSRYYAIKKIRHT----------------------------EEKLSTILSEVML   55 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEEE----------------------------HHHHHHHHHHHHH
T ss_pred             cccchhhheeccCCcEEEEEEEEc-CCCeEEEEEEEecc----------------------------HHHHHHHHHHHHH
Confidence            458999999999999999999854 57899999998431                            1235678899999


Q ss_pred             HhhccCCCccceeEEEecCC-----------cceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhc
Q 046907          127 VGQIRHRNLHPLLAHVTRPD-----------CHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMH  185 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~-----------~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~  185 (345)
                      ++.++||||+++++++....           ...+++++++++++++          ++......++.|++.||.|||+.
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~  135 (303)
T 1zy4_A           56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ  135 (303)
T ss_dssp             HTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999886532           3467899999987654          34456678999999999999999


Q ss_pred             CCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCc------------ceeccCcccCcccccccccccc-ccCccc
Q 046907          186 HCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHT------------HITTSNVVGTVEYIAPEYLQML-TLTEKC  252 (345)
Q Consensus       186 ~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~gt~~~~aPE~~~~~-~~~~~~  252 (345)
                      +   ++|+||||+||+++.++.+||+|||++........            ........||..|+|||.+.+. .++.++
T Consensus       136 ~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  212 (303)
T 1zy4_A          136 G---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI  212 (303)
T ss_dssp             T---CCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHH
T ss_pred             C---eecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchh
Confidence            8   99999999999999999999999999976543210            1122346789999999999865 588999


Q ss_pred             hhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCC
Q 046907          253 DIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERP  331 (345)
Q Consensus       253 Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rp  331 (345)
                      ||| +|+++|+|++   ||..   ..........+....   .       .............+.+++..||+.||.+||
T Consensus       213 Di~slG~il~~l~~---p~~~---~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  276 (303)
T 1zy4_A          213 DMYSLGIIFFEMIY---PFST---GMERVNILKKLRSVS---I-------EFPPDFDDNKMKVEKKIIRLLIDHDPNKRP  276 (303)
T ss_dssp             HHHHHHHHHHHHHS---CCSS---HHHHHHHHHHHHSTT---C-------CCCTTCCTTTSHHHHHHHHHHTCSSGGGSC
T ss_pred             hHHHHHHHHHHHHh---ccCC---chhHHHHHHhccccc---c-------ccCccccccchHHHHHHHHHHHhcCcccCc
Confidence            999 9999999998   5321   111122222222111   0       011112223334577889999999999999


Q ss_pred             CHHHHHH
Q 046907          332 NSKDVRR  338 (345)
Q Consensus       332 t~~~ll~  338 (345)
                      |+.++++
T Consensus       277 s~~~ll~  283 (303)
T 1zy4_A          277 GARTLLN  283 (303)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHhC
Confidence            9999986


No 239
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=1.9e-38  Score=282.00  Aligned_cols=243  Identities=24%  Similarity=0.355  Sum_probs=188.1

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|+.. .+++.||+|.+......                         ......+.+|+.+
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~valK~~~~~~~~-------------------------~~~~~~~~~e~~~   74 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDR-ITQQEYAVKVINKASAK-------------------------NKDTSTILREVEL   74 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGBS-------------------------SSCHHHHHHHHHH
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEc-CCCcEEEEEEecccccc-------------------------hHHHHHHHHHHHH
Confidence            458999999999999999999864 57899999998543221                         1124567889999


Q ss_pred             HhhccCCCccceeEEEecCCcceeeeeccccCCCCC---------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNP  197 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~  197 (345)
                      +++++||||+++++++...+  .++++++++.++.+         ++......++.|++.||.|||+.+   ++|+||||
T Consensus        75 l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p  149 (287)
T 2wei_A           75 LKKLDHPNIMKLFEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKP  149 (287)
T ss_dssp             HHTCCCTTBCCEEEEEECSS--EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCG
T ss_pred             HHhccCCCccEEEEEEeCCC--eEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCh
Confidence            99999999999999988765  68899999987654         566677899999999999999998   99999999


Q ss_pred             CCeeecCC---CCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccc
Q 046907          198 VNVLLDDD---IEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKF  273 (345)
Q Consensus       198 ~nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~  273 (345)
                      +||+++.+   +.+||+|||++........   .....||+.|+|||.+.+ .++.++||| +|+++|+|++|..||.. 
T Consensus       150 ~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~-  224 (287)
T 2wei_A          150 ENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG-  224 (287)
T ss_dssp             GGEEESCSSTTCCEEECSTTGGGTBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCC-
T ss_pred             hhEEEecCCCcccEEEeccCcceeecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCC-
Confidence            99999754   4799999999976544321   233568899999999876 488999999 99999999999999643 


Q ss_pred             ccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          274 FQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                         ....+....+..........          ........+.+++..||+.||++|||+.++++
T Consensus       225 ---~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          225 ---KNEYDILKRVETGKYAFDLP----------QWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             ---SSHHHHHHHHHHCCCCCCSG----------GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---CCHHHHHHHHHcCCCCCCch----------hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence               23333333332221110000          00111234778999999999999999999987


No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=2e-38  Score=288.41  Aligned_cols=244  Identities=18%  Similarity=0.239  Sum_probs=160.4

Q ss_pred             hcCCccccc-ccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLE-KIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        46 ~~~~~~~~~-~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      -.++|++.+ .||+|+||.||+|+.+ .+|+.||||.+.....                            ...   ...
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~----------------------------~~~---e~~   73 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHR-RTGQKCALKLLYDSPK----------------------------ARQ---EVD   73 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEESSHH----------------------------HHH---HHH
T ss_pred             ccceeEecceeeeeCCCeEEEEEEEC-CCCCEEEEEEecCcHH----------------------------HHH---HHH
Confidence            456899965 6999999999999864 5799999999854210                            011   122


Q ss_pred             HHHhhccCCCccceeEEEec--CCcceeeeeccccCCCC-----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          125 NTVGQIRHRNLHPLLAHVTR--PDCHLLYILNDVSQGRR-----------ELDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       125 ~~l~~l~hpniv~l~~~~~~--~~~~~l~~~~~~~~~~~-----------~l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      ..++.++||||+++++++..  .+...++++++++.+++           .+++..+..++.|++.||.|||+.+   ++
T Consensus        74 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---iv  150 (336)
T 3fhr_A           74 HHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IA  150 (336)
T ss_dssp             HHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             HHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            33556799999999998865  22346899999998753           3677788899999999999999999   99


Q ss_pred             ecCCCCCCeeecC---CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCC
Q 046907          192 HRDLNPVNVLLDD---DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGK  267 (345)
Q Consensus       192 H~dlk~~nil~~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~  267 (345)
                      ||||||+||+++.   ++.+||+|||++.......    .....||+.|+|||.+.+..++.++||| +|+++|+|++|.
T Consensus       151 H~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  226 (336)
T 3fhr_A          151 HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGF  226 (336)
T ss_dssp             CSCCSGGGEEESCSSTTCCEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCHHHEEEEecCCCceEEEeccccceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCC
Confidence            9999999999985   4569999999998654322    2345789999999999888899999999 999999999999


Q ss_pred             CCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          268 LPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       268 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .||...............+......          ............+.+++..||+.||++|||+.++++
T Consensus       227 ~pf~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          227 PPFYSNTGQAISPGMKRRIRLGQYG----------FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             CCC---------------------C----------CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCCccchhhhhhHHHhhhccccc----------cCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            9975432211111111111111000          000111122345778899999999999999999986


No 241
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=9.8e-38  Score=293.31  Aligned_cols=239  Identities=23%  Similarity=0.330  Sum_probs=172.6

Q ss_pred             CcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046907           49 GLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVG  128 (345)
Q Consensus        49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~  128 (345)
                      .|.+.+.||+|+||.||.+..  .+|+.||||.+...                              ..+.+.+|+.+++
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~--~~g~~vAvK~~~~~------------------------------~~~~~~~E~~~l~   63 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGS--FQGRPVAVKRMLID------------------------------FCDIALMEIKLLT   63 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEE--SSSSEEEEEEEEGG------------------------------GHHHHHHHHHHHH
T ss_pred             eeeccCeEeeCCCeEEEEEEE--ECCeEEEEEEEcHH------------------------------HHHHHHHHHHHHH
Confidence            445567899999999976543  37999999998521                              1234568999998


Q ss_pred             hc-cCCCccceeEEEecCCcceeeeeccccCCCCCCCHH----------------HHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          129 QI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWL----------------ARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       129 ~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~----------------~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      ++ +||||+++++++..++  .+++++|++.+ ++.++.                ....++.|++.||.|||+.+   ++
T Consensus        64 ~l~~HpnIv~~~~~~~~~~--~~~lv~E~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---iv  137 (434)
T 2rio_A           64 ESDDHPNVIRYYCSETTDR--FLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---II  137 (434)
T ss_dssp             HHTTSTTBCCEEEEEECSS--EEEEEECCCSE-EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             hccCCCCcCeEEEEEecCC--eEEEEEecCCC-CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---cc
Confidence            76 8999999999987765  78999999864 332211                23469999999999999998   99


Q ss_pred             ecCCCCCCeeecCC-------------CCeEEeccccceecCCCCcc--eeccCcccCccccccccccc-------cccC
Q 046907          192 HRDLNPVNVLLDDD-------------IEARISGFGFARAIPDAHTH--ITTSNVVGTVEYIAPEYLQM-------LTLT  249 (345)
Q Consensus       192 H~dlk~~nil~~~~-------------~~~kl~Dfg~a~~~~~~~~~--~~~~~~~gt~~~~aPE~~~~-------~~~~  249 (345)
                      ||||||+|||++.+             +.+||+|||++.........  .......||+.|+|||++.+       ..++
T Consensus       138 HrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  217 (434)
T 2rio_A          138 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLT  217 (434)
T ss_dssp             CCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCC
T ss_pred             ccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcc
Confidence            99999999999754             47999999999876543221  12234689999999999976       5688


Q ss_pred             ccchhh-HHHHHHHHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCC
Q 046907          250 EKCDIY-FGALLAGLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDP  327 (345)
Q Consensus       250 ~~~Dvw-lG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp  327 (345)
                      .++||| +|+++|||++ |..||......     ....+......+.        ............+.+++.+||+.||
T Consensus       218 ~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~li~~~L~~dP  284 (434)
T 2rio_A          218 RSIDIFSMGCVFYYILSKGKHPFGDKYSR-----ESNIIRGIFSLDE--------MKCLHDRSLIAEATDLISQMIDHDP  284 (434)
T ss_dssp             THHHHHHHHHHHHHHHTTSCCTTCSTTTH-----HHHHHHTCCCCCC--------CTTCCCHHHHHHHHHHHHHHTCSSG
T ss_pred             hhhhhHhHHHHHHHHHhCCCCCCCCchhh-----HHHHhcCCCCccc--------ccccccccchHHHHHHHHHHhhCCh
Confidence            999999 9999999999 99997543221     1111111111100        1111234556678899999999999


Q ss_pred             CCCCCHHHHHH
Q 046907          328 NERPNSKDVRR  338 (345)
Q Consensus       328 ~~Rpt~~~ll~  338 (345)
                      .+|||+.++++
T Consensus       285 ~~Rps~~eil~  295 (434)
T 2rio_A          285 LKRPTAMKVLR  295 (434)
T ss_dssp             GGSCCHHHHHT
T ss_pred             hhCCCHHHHHh
Confidence            99999999975


No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=4.7e-38  Score=283.97  Aligned_cols=240  Identities=18%  Similarity=0.287  Sum_probs=183.9

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ..-.++|++.+.||+|+||.||+|+.. .++..||||.+...........                     .....+.+|
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~---------------------~~~~~~~~E   96 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRV-SDNLPVAIKHVEKDRISDWGEL---------------------PNGTRVPME   96 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEET-TTTEEEEEEEEEGGGCCCEEEC---------------------TTCCEEEHH
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEEecccchhhhhh---------------------hhhhHHHHH
Confidence            345678999999999999999999854 5799999999864322110000                     012345578


Q ss_pred             HHHHhhcc--CCCccceeEEEecCCcceeeeeccccCC-C---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          124 INTVGQIR--HRNLHPLLAHVTRPDCHLLYILNDVSQG-R---------RELDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       124 ~~~l~~l~--hpniv~l~~~~~~~~~~~l~~~~~~~~~-~---------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      +.++++++  ||||+++++++..++  ..+++++++.+ +         ..++......++.|++.||.|||+.+   ++
T Consensus        97 ~~~l~~l~~~~~~i~~~~~~~~~~~--~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iv  171 (320)
T 3a99_A           97 VVLLKKVSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VL  171 (320)
T ss_dssp             HHHHHHHCSSSCSBCCEEEEEECSS--EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             HHHHHhhccCCCCceEEEEEEecCC--cEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cE
Confidence            99999995  599999999998776  67778888764 2         34667777889999999999999998   99


Q ss_pred             ecCCCCCCeeec-CCCCeEEeccccceecCCCCcceeccCcccCcccccccccccccc-Cccchhh-HHHHHHHHHhCCC
Q 046907          192 HRDLNPVNVLLD-DDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTL-TEKCDIY-FGALLAGLVMGKL  268 (345)
Q Consensus       192 H~dlk~~nil~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~-~~~~Dvw-lG~vl~el~tg~~  268 (345)
                      ||||||+||+++ .++.+||+|||++.......    .....||+.|+|||.+.+..+ +.++||| +|+++|||++|..
T Consensus       172 H~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~  247 (320)
T 3a99_A          172 HRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI  247 (320)
T ss_dssp             CCCCSGGGEEEETTTTEEEECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             eCCCCHHHEEEeCCCCCEEEeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCC
Confidence            999999999999 77899999999998765432    234678999999999987775 6789999 9999999999999


Q ss_pred             CCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          269 PSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       269 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ||....      .   .    ......   ..    ..    ....+.+++.+||+.||++|||+.++++
T Consensus       248 pf~~~~------~---~----~~~~~~---~~----~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          248 PFEHDE------E---I----IRGQVF---FR----QR----VSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             SCCSHH------H---H----HHCCCC---CS----SC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCChh------h---h----hccccc---cc----cc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            974311      0   0    101100   00    01    1234778899999999999999999986


No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=9.2e-38  Score=280.85  Aligned_cols=240  Identities=17%  Similarity=0.208  Sum_probs=175.8

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ..-.++|++.+.||+|+||.||+|+.. .++..||||.+..........                     ......+.+|
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~---------------------~~~~~~~~~e   84 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRL-TDRLQVAIKVIPRNRVLGWSP---------------------LSDSVTCPLE   84 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECT-TTCCEEEEEECCSTTTC-----------------------------CCCCHH
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEc-cCCeEEEEEEEeccccccccc---------------------chhhHHHHHH
Confidence            334678999999999999999999854 578999999996543221100                     0123445678


Q ss_pred             HHHHhhc----cCCCccceeEEEecCCcceeeeeccc-cCCCC---------CCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 046907          124 INTVGQI----RHRNLHPLLAHVTRPDCHLLYILNDV-SQGRR---------ELDWLARHRIALGLACGLEYLHMHHCPR  189 (345)
Q Consensus       124 ~~~l~~l----~hpniv~l~~~~~~~~~~~l~~~~~~-~~~~~---------~l~~~~~~~i~~~i~~~l~~lh~~~~~~  189 (345)
                      +.++.++    +||||+++++++...+  ..++++++ +.+++         .+++..+..++.|++.||.|||+.+   
T Consensus        85 ~~~l~~l~~~~~h~~i~~~~~~~~~~~--~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---  159 (312)
T 2iwi_A           85 VALLWKVGAGGGHPGVIRLLDWFETQE--GFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRG---  159 (312)
T ss_dssp             HHHHHHHHSSCCCSSBCCEEEEC-------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHhhcccCCCCCeeeEEEEEecCC--eEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            8998888    8999999999987765  45666666 45433         3677778899999999999999999   


Q ss_pred             eEecCCCCCCeeec-CCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccC-ccchhh-HHHHHHHHHhC
Q 046907          190 IIHRDLNPVNVLLD-DDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLT-EKCDIY-FGALLAGLVMG  266 (345)
Q Consensus       190 iiH~dlk~~nil~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~-~~~Dvw-lG~vl~el~tg  266 (345)
                      ++||||||+||+++ .++.+||+|||++.......    .....|+..|+|||.+.+..+. .++||| +|+++|+|++|
T Consensus       160 i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g  235 (312)
T 2iwi_A          160 VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG  235 (312)
T ss_dssp             EECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHS
T ss_pred             eeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHC
Confidence            99999999999999 78899999999998765432    2346789999999999877664 589999 99999999999


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ..||....      .   ...    ....           ........+.+++.+||+.||++|||+.++++
T Consensus       236 ~~pf~~~~------~---~~~----~~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          236 DIPFERDQ------E---ILE----AELH-----------FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             SCSCCSHH------H---HHH----TCCC-----------CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCCChH------H---Hhh----hccC-----------CcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            99975311      1   110    0000           00111234778899999999999999999986


No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.9e-38  Score=295.54  Aligned_cols=241  Identities=22%  Similarity=0.333  Sum_probs=172.8

Q ss_pred             HhhcCCcccccccccCcceeeE-EEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVY-KAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQS  122 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~-~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (345)
                      .....+|++.+.||+|+||.|+ ++..   +|+.||||.+.....                              ..+.+
T Consensus        20 ~i~~~~y~~~~~LG~G~~G~V~~~~~~---~~~~vAvK~~~~~~~------------------------------~~~~~   66 (432)
T 3p23_A           20 IVGKISFCPKDVLGHGAEGTIVYRGMF---DNRDVAVKRILPECF------------------------------SFADR   66 (432)
T ss_dssp             EETTEEEEEEEEEEECGGGCEEEEEES---SSSEEEEEEECTTTE------------------------------EECHH
T ss_pred             EEccEEEecCCeeecCcCEEEEEEEEe---CCeEEEEEEECHHHH------------------------------HHHHH
Confidence            4455689999999999999854 4442   789999999964321                              12346


Q ss_pred             HHHHHhhc-cCCCccceeEEEecCCcceeeeeccccCCCCC----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 046907          123 EINTVGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE----------LDWLARHRIALGLACGLEYLHMHHCPRII  191 (345)
Q Consensus       123 E~~~l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~----------l~~~~~~~i~~~i~~~l~~lh~~~~~~ii  191 (345)
                      |+.+++.+ +||||+++++++...+  .++++++++.+ ++          ........++.|++.||.|||+.+   ++
T Consensus        67 E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---iv  140 (432)
T 3p23_A           67 EVQLLRESDEHPNVIRYFCTEKDRQ--FQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN---IV  140 (432)
T ss_dssp             HHHHHHHSCCCTTBCCEEEEEEETT--EEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             HHHHHHhccCCCCcCeEEEEEecCC--EEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc---CE
Confidence            89999999 8999999999988766  78999999864 22          223345689999999999999999   99


Q ss_pred             ecCCCCCCeeecC-----CCCeEEeccccceecCCCCc-ceeccCcccCccccccccccc---cccCccchhh-HHHHHH
Q 046907          192 HRDLNPVNVLLDD-----DIEARISGFGFARAIPDAHT-HITTSNVVGTVEYIAPEYLQM---LTLTEKCDIY-FGALLA  261 (345)
Q Consensus       192 H~dlk~~nil~~~-----~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~gt~~~~aPE~~~~---~~~~~~~Dvw-lG~vl~  261 (345)
                      ||||||+|||++.     ...+||+|||++........ ........||+.|+|||++.+   ..++.++||| +|+++|
T Consensus       141 HrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~  220 (432)
T 3p23_A          141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY  220 (432)
T ss_dssp             CCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHH
T ss_pred             eCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHH
Confidence            9999999999953     34688999999987653321 122345679999999999974   4577899999 999999


Q ss_pred             HHHh-CCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          262 GLVM-GKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       262 el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ||++ |..||.....    ... ..+   ....... ...      ........+.+++.+||+.||.+|||+.++++
T Consensus       221 ellt~g~~pf~~~~~----~~~-~~~---~~~~~~~-~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          221 YVISEGSHPFGKSLQ----RQA-NIL---LGACSLD-CLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HHHTTSCBTTBSTTT----HHH-HHH---TTCCCCT-TSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHcCCCCCcchhhH----HHH-HHH---hccCCcc-ccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            9999 8999743211    111 111   1111110 000      11123344778999999999999999999984


No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1e-36  Score=301.66  Aligned_cols=236  Identities=21%  Similarity=0.286  Sum_probs=187.5

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|++...+|+.||||.+.....                          ......+.+|+.+
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~--------------------------~~~~~~~~~E~~~  132 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD--------------------------AEAQAMAMAERQF  132 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC--------------------------HHHHHHHHHHHGG
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC--------------------------HHHHHHHHHHHHH
Confidence            37899999999999999999997644789999999864321                          1235567889999


Q ss_pred             HhhccCCCccceeEEEecCCc---ceeeeeccccCCCCC-------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 046907          127 VGQIRHRNLHPLLAHVTRPDC---HLLYILNDVSQGRRE-------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLN  196 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~~~~---~~l~~~~~~~~~~~~-------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk  196 (345)
                      +++++||||+++++++...+.   ...++++||++++++       +++..+..++.|++.||.|||+.+   |+|||||
T Consensus       133 l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlk  209 (681)
T 2pzi_A          133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIG---LVYNDLK  209 (681)
T ss_dssp             GGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred             HHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecccC
Confidence            999999999999999887653   236899999987654       667788899999999999999999   9999999


Q ss_pred             CCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCccccc
Q 046907          197 PVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       197 ~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~  275 (345)
                      |+|||++.+ .+||+|||++......      ....||+.|+|||++.+.. +.++||| +|+++|+|++|..||...+.
T Consensus       210 p~NIll~~~-~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~  281 (681)
T 2pzi_A          210 PENIMLTEE-QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV  281 (681)
T ss_dssp             GGGEEECSS-CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC
T ss_pred             hHHeEEeCC-cEEEEecccchhcccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc
Confidence            999999986 8999999999876543      3467999999999997754 8899999 99999999999888643221


Q ss_pred             ccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHHHhhh
Q 046907          276 HTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPN-SKDVRRMLSQI  343 (345)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt-~~~ll~~L~~l  343 (345)
                      ..                .+.        ..........+.+++.+||+.||++||+ ++++...|..+
T Consensus       282 ~~----------------~~~--------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          282 DG----------------LPE--------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             SS----------------CCT--------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             cc----------------ccc--------cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            10                000        0001122345889999999999999995 66676666554


No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=4.8e-37  Score=298.23  Aligned_cols=251  Identities=22%  Similarity=0.299  Sum_probs=183.8

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      .++|++.+.||+|+||.||+|.+. .+|..||||.+.....                          ......+.+|+.+
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~-~tg~~VAVKvi~~~~~--------------------------~~~~~~~~~Ei~i   65 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQ-DTGEQVAIKQCRQELS--------------------------PKNRERWCLEIQI   65 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCT-TTTCCEEECCCCSCCC--------------------------HHHHHHHHHHHHH
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEecccCC--------------------------HHHHHHHHHHHHH
Confidence            478999999999999999999854 5799999999865321                          2235678899999


Q ss_pred             HhhccCCCccceeEEEec----CCcceeeeeccccCCCCC------------CCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          127 VGQIRHRNLHPLLAHVTR----PDCHLLYILNDVSQGRRE------------LDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       127 l~~l~hpniv~l~~~~~~----~~~~~l~~~~~~~~~~~~------------l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      +++++||||+++++++..    ......+++++++.++++            +++..+..++.|++.||.|||+.+   +
T Consensus        66 L~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---I  142 (676)
T 3qa8_A           66 MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---I  142 (676)
T ss_dssp             HHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---B
T ss_pred             HHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---C
Confidence            999999999999998755    123467899999987543            556677889999999999999998   9


Q ss_pred             EecCCCCCCeeecCCCC---eEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhC
Q 046907          191 IHRDLNPVNVLLDDDIE---ARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMG  266 (345)
Q Consensus       191 iH~dlk~~nil~~~~~~---~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg  266 (345)
                      +||||||+||+++.++.   ++|+|||++........   .....||+.|+|||.+.+..++.++||| +|+++|+|++|
T Consensus       143 VHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG  219 (676)
T 3qa8_A          143 IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG  219 (676)
T ss_dssp             CCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSS
T ss_pred             ccCCCCHHHeEeecCCCceeEEEcccccccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHC
Confidence            99999999999996654   89999999987654322   2346899999999999999999999999 99999999999


Q ss_pred             CCCCcccccccchhhHHHHHHHH--------hhhcCCCcc--ccc--cccCCCcHHHHHHHHHHHhhccCCCCCCCCCHH
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNV--------MASENPKRA--IDS--KLVGNGCEEQMLLVLKIACFCTLEDPNERPNSK  334 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~--~~~--~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~  334 (345)
                      ..||.....      ...+....        .........  ...  .......+.....+.+++..||+.||++|||+.
T Consensus       220 ~~Pf~~~~~------~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~  293 (676)
T 3qa8_A          220 FRPFLPNWQ------PVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDP  293 (676)
T ss_dssp             CSSCCSSCH------HHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCT
T ss_pred             CCCCCcccc------hhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHH
Confidence            999754211      00000000        000000000  000  111223344567788999999999999999997


Q ss_pred             HH
Q 046907          335 DV  336 (345)
Q Consensus       335 ~l  336 (345)
                      ++
T Consensus       294 el  295 (676)
T 3qa8_A          294 QN  295 (676)
T ss_dssp             TC
T ss_pred             HH
Confidence            73


No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=2.5e-36  Score=281.94  Aligned_cols=236  Identities=16%  Similarity=0.121  Sum_probs=165.0

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      ..+|...+.||+|+||.||+|++. .+|+.||||++.......                        ....+.+.+|+.+
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~-~~g~~vAvK~~~~~~~~~------------------------~~~~~~~~~E~~~  131 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQ-ETGESFEVHVPYFTERPP------------------------SNAIKQMKEEVLR  131 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEECCSCC----------------------------CCHHHHHHHHG
T ss_pred             ceeEEEecccccCCCEEEEEEEec-CCCCceEEEEEecCCCcc------------------------HHHHHHHHHHHHH
Confidence            345888899999999999999964 579999999987432221                        1225567789999


Q ss_pred             HhhccC-CCcc---------ceeEEEec------------CC---cceeeeeccccCC---------------CCCCCHH
Q 046907          127 VGQIRH-RNLH---------PLLAHVTR------------PD---CHLLYILNDVSQG---------------RRELDWL  166 (345)
Q Consensus       127 l~~l~h-pniv---------~l~~~~~~------------~~---~~~l~~~~~~~~~---------------~~~l~~~  166 (345)
                      ++.++| +|..         ...+....            ..   ...++++++...+               +..+++.
T Consensus       132 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~  211 (413)
T 3dzo_A          132 LRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHH  211 (413)
T ss_dssp             GGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHH
T ss_pred             HHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHH
Confidence            988876 2211         11111111            11   1123444443321               2224455


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccccc---
Q 046907          167 ARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYL---  243 (345)
Q Consensus       167 ~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~---  243 (345)
                      .+..++.|++.||.|||+.+   ++||||||+|||++.++.+||+|||+++.....     .....| +.|+|||++   
T Consensus       212 ~~~~i~~qi~~aL~~LH~~~---iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~  282 (413)
T 3dzo_A          212 ARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAER  282 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCC---cccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhcc
Confidence            66788999999999999999   999999999999999999999999998765432     344677 999999999   


Q ss_pred             -------cccccCccchhh-HHHHHHHHHhCCCCCcccccccchhhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHH
Q 046907          244 -------QMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLV  315 (345)
Q Consensus       244 -------~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  315 (345)
                             .+..++.++||| +|+++|||++|..||........                ....+...  .    .....+
T Consensus       283 ~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~----------------~~~~~~~~--~----~~~~~~  340 (413)
T 3dzo_A          283 MLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG----------------SEWIFRSC--K----NIPQPV  340 (413)
T ss_dssp             TSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSC----------------SGGGGSSC--C----CCCHHH
T ss_pred             ccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhh----------------HHHHHhhc--c----cCCHHH
Confidence                   555688899999 99999999999999754322110                00000000  0    112457


Q ss_pred             HHHHhhccCCCCCCCCCHHHHHH
Q 046907          316 LKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       316 ~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      .++|..||+.||++|||+.++++
T Consensus       341 ~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          341 RALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHccCChhhCcCHHHHHh
Confidence            88999999999999999877754


No 248
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=3.7e-36  Score=267.23  Aligned_cols=226  Identities=13%  Similarity=0.060  Sum_probs=171.5

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ++|++.+.||+|+||.||+|++. .+++.||||.+.......                        ......+.+|+.++
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~------------------------~~~~~~~~~e~~~l   85 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDT-ALDRQVALTFVDPQGVLP------------------------DDVLQETLSRTLRL   85 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEET-TTTEEEEEEESCTTCCSC------------------------HHHHHHHHHHHHHH
T ss_pred             CcEEEEEEEcccCCeEEEEEEec-CCCceEEEEEECcccccC------------------------HHHHHHHHHHHHHH
Confidence            68999999999999999999864 579999999997654321                        12356788999999


Q ss_pred             hhccCCCccceeEEEecCCcceeeeeccccCCCCC-------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCe
Q 046907          128 GQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE-------LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNV  200 (345)
Q Consensus       128 ~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~-------l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~ni  200 (345)
                      ..++||||+++++++..++  ..++++||+.++++       .......+++.|++.||.|||+.+   ++||||||+||
T Consensus        86 ~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NI  160 (286)
T 3uqc_A           86 SRIDKPGVARVLDVVHTRA--GGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRV  160 (286)
T ss_dssp             HTCCCTTBCCEEEEEEETT--EEEEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGE
T ss_pred             hcCCCCCcceeeEEEEECC--cEEEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccE
Confidence            9999999999999998876  68999999987543       234466789999999999999999   99999999999


Q ss_pred             eecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCCCcccccccch
Q 046907          201 LLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLPSDKFFQHTNE  279 (345)
Q Consensus       201 l~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~~~~~~~~~~  279 (345)
                      |++.++.+||++++.                      ++       +++.++||| +|+++|||++|..||.........
T Consensus       161 ll~~~g~~kl~~~~~----------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~  211 (286)
T 3uqc_A          161 RVSIDGDVVLAYPAT----------------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL  211 (286)
T ss_dssp             EEETTSCEEECSCCC----------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS
T ss_pred             EEcCCCCEEEEeccc----------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh
Confidence            999999999975432                      22       368899999 999999999999998653221100


Q ss_pred             hhHHHHHHHHhhhcCCCccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhhh
Q 046907          280 MSFVKWMRNVMASENPKRAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLSQIQ  344 (345)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~~l~  344 (345)
                      ....    ......    ...+..   ..+.....+.+++.+||+.||++| |+.++++.|+++.
T Consensus       212 ~~~~----~~~~~~----~~~~~~---~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~  264 (286)
T 3uqc_A          212 APAE----RDTAGQ----PIEPAD---IDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQAT  264 (286)
T ss_dssp             EECC----BCTTSC----BCCHHH---HCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred             HHHH----HHhccC----CCChhh---cccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence            0000    000000    000000   011122347889999999999999 9999999999864


No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=4.6e-35  Score=261.83  Aligned_cols=221  Identities=16%  Similarity=0.208  Sum_probs=164.4

Q ss_pred             hcCCcccc-cccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASL-EKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        46 ~~~~~~~~-~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      -.++|.+. +.||+|+||.||+|+.. .+++.||+|.+..                                ...+.+|+
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~--------------------------------~~~~~~e~   61 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNK-RTQEKFALKMLQD--------------------------------CPKARREV   61 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEC--------------------------------SHHHHHHH
T ss_pred             cccchhhcCcccccCCCeEEEEEEEc-CCCcEEEEEEecc--------------------------------cHHHHHHH
Confidence            34578888 77999999999999854 5799999999953                                12345678


Q ss_pred             HHH-hhccCCCccceeEEEec--CCcceeeeeccccCCCCC-----------CCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046907          125 NTV-GQIRHRNLHPLLAHVTR--PDCHLLYILNDVSQGRRE-----------LDWLARHRIALGLACGLEYLHMHHCPRI  190 (345)
Q Consensus       125 ~~l-~~l~hpniv~l~~~~~~--~~~~~l~~~~~~~~~~~~-----------l~~~~~~~i~~~i~~~l~~lh~~~~~~i  190 (345)
                      .++ +..+||||+++++++..  .+...++++++++.++++           +++.....++.|++.||.|||+.+   +
T Consensus        62 ~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i  138 (299)
T 3m2w_A           62 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---I  138 (299)
T ss_dssp             HHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             HHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            777 55599999999998865  334578999999987543           667778899999999999999999   9


Q ss_pred             EecCCCCCCeeecC---CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhC
Q 046907          191 IHRDLNPVNVLLDD---DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMG  266 (345)
Q Consensus       191 iH~dlk~~nil~~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg  266 (345)
                      +||||||+||+++.   ++.++|+|||++....                        +..++.++||| +|+++|+|++|
T Consensus       139 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg  194 (299)
T 3m2w_A          139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCG  194 (299)
T ss_dssp             ECCCCSGGGEEESSSSTTCCEEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHS
T ss_pred             ccCCCCHHHEEEecCCCCCcEEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHC
Confidence            99999999999997   7889999999986432                        23567899999 99999999999


Q ss_pred             CCCCcccccccchhhHHHHHHHHhhhcCCCccccc--cccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 046907          267 KLPSDKFFQHTNEMSFVKWMRNVMASENPKRAIDS--KLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVRR  338 (345)
Q Consensus       267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~  338 (345)
                      ..||.......    ..        ..........  .............+.+++..||+.||++|||+.++++
T Consensus       195 ~~pf~~~~~~~----~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          195 YPPFYSNHGLA----IS--------PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             SCSCCC-------------------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCCCCcchh----hh--------HHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            99975422110    00        0000000000  0000000112345788999999999999999999986


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=9.8e-35  Score=263.95  Aligned_cols=243  Identities=18%  Similarity=0.131  Sum_probs=175.3

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ..++|++++.||+|+||.||+|++   +|+.||||.+............                   ....+.+.+|+.
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~---~~~~vAvK~~~~~~~~~~~~~~-------------------~~~~~~~~~E~~   75 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIA---DHTPVAIKIIAIEGPDLVNGSH-------------------QKTFEEILPEII   75 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEE---TTEEEEEEEEEESCSSCBTTBC-------------------CBCHHHHHHHHH
T ss_pred             ccccchheeeecccCceEEEEEEe---CCceEEEEEEecCCcccccccc-------------------chhHHHHHHHHH
Confidence            457899999999999999999986   6899999999754321000000                   011355677888


Q ss_pred             HHhhcc---------CCCccceeEEEecC----------------------------CcceeeeeccccCCCC-------
Q 046907          126 TVGQIR---------HRNLHPLLAHVTRP----------------------------DCHLLYILNDVSQGRR-------  161 (345)
Q Consensus       126 ~l~~l~---------hpniv~l~~~~~~~----------------------------~~~~l~~~~~~~~~~~-------  161 (345)
                      +++.++         ||||+++.+.+...                            +...+++++||+.+|.       
T Consensus        76 ~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~  155 (336)
T 2vuw_A           76 ISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT  155 (336)
T ss_dssp             HHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT
T ss_pred             HHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh
Confidence            887775         77777777654311                            1347899999998764       


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHh-hcCCCCeEecCCCCCCeeecCCC--------------------CeEEeccccceec
Q 046907          162 -ELDWLARHRIALGLACGLEYLH-MHHCPRIIHRDLNPVNVLLDDDI--------------------EARISGFGFARAI  219 (345)
Q Consensus       162 -~l~~~~~~~i~~~i~~~l~~lh-~~~~~~iiH~dlk~~nil~~~~~--------------------~~kl~Dfg~a~~~  219 (345)
                       .++...+..++.|++.||.||| +.+   |+||||||+|||++.++                    .+||+|||+|+..
T Consensus       156 ~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~  232 (336)
T 2vuw_A          156 KLSSLATAKSILHQLTASLAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLE  232 (336)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEE
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEec
Confidence             3567788999999999999999 898   99999999999999876                    8999999999876


Q ss_pred             CCCCcceeccCcccCccccccccccccccCccchhh-HHHH-HHHHHhCCCCCcccccccchhhHHHHH-HHHhhhcCCC
Q 046907          220 PDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGAL-LAGLVMGKLPSDKFFQHTNEMSFVKWM-RNVMASENPK  296 (345)
Q Consensus       220 ~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~v-l~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~  296 (345)
                      ...       ...||+.|+|||++.+.. +.++||| ++++ .+++++|..||...       .....+ ..........
T Consensus       233 ~~~-------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~-------~~~~~~~~~~~~~~~~~  297 (336)
T 2vuw_A          233 RDG-------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV-------LWLHYLTDKMLKQMTFK  297 (336)
T ss_dssp             ETT-------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH-------HHHHHHHHHHHHTCCCS
T ss_pred             CCC-------cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch-------hhhhHHHHhhhhhhccC
Confidence            432       357999999999999876 8899999 8776 77788899995321       110111 1111111110


Q ss_pred             ccccccccCCCcHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 046907          297 RAIDSKLVGNGCEEQMLLVLKIACFCTLEDPNERPNSKDVR  337 (345)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll  337 (345)
                          ........+.....+.+|+.+||+.|     |+.+++
T Consensus       298 ----~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          298 ----TKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             ----SCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             ----cccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence                00111123456677999999999976     999887


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95  E-value=1.7e-29  Score=244.12  Aligned_cols=189  Identities=18%  Similarity=0.084  Sum_probs=124.8

Q ss_pred             ccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCC
Q 046907           55 KIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQI-RHR  133 (345)
Q Consensus        55 ~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp  133 (345)
                      ..+.|+.|.+..++ +.-.|+.+|+|.+.........                 .........+++.+|+++|+++ +|+
T Consensus       241 ~~~~~~~~~h~~~r-r~~fg~~~~~K~~~~~~~~~~~-----------------~~~~~~~~~~~~~~E~~~l~~~~~~~  302 (569)
T 4azs_A          241 QPYAGAGLAHKRSR-RYFFGEDYVCKFFYYDMPHGIL-----------------TAEESQRNKYELHNEIKFLTQPPAGF  302 (569)
T ss_dssp             C-C--------CCE-EEEECSSEEEEEEESSCSTTCS-----------------CHHHHHHHHHHHHHHHHHHHSCCTTC
T ss_pred             ccccCCcccccccc-cccccceeEEEEEecccccccc-----------------hhhhhHHHHHHHHHHHHHHHhcCCCC
Confidence            34556665555443 2236889999999754322110                 0111134577899999999999 799


Q ss_pred             CccceeEEEecCCcceeeeeccccCCCCCCCHHH------HHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCC
Q 046907          134 NLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA------RHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIE  207 (345)
Q Consensus       134 niv~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~------~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~  207 (345)
                      ||+++++++.+++  .+|+||||++|+++.+.+.      ..+|+.||+.||.|+|++|   |+||||||+|||++.++.
T Consensus       303 ~i~~~~~~~ed~~--~~yLVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~  377 (569)
T 4azs_A          303 DAPAVLAHGENAQ--SGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQH  377 (569)
T ss_dssp             CCCCEEEEEECSS--EEEEEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSC
T ss_pred             CeeEEEEEEEECC--EEEEEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCC
Confidence            9999999998776  7999999999976644332      2469999999999999999   999999999999999999


Q ss_pred             eEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh-HHHHHHHHHhCCCC
Q 046907          208 ARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY-FGALLAGLVMGKLP  269 (345)
Q Consensus       208 ~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p  269 (345)
                      +||+|||+|+.......  ...+.+||+.|||||++.+. +..++|+| +|++++++.++..+
T Consensus       378 vKL~DFGlAr~~~~~~~--~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          378 ARLIDFGSIVTTPQDCS--WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             EEECCCTTEESCC---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             EEEeecccCeeCCCCCc--cccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence            99999999987654322  23457899999999999874 56789999 99988776554433


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93  E-value=5.7e-27  Score=225.20  Aligned_cols=191  Identities=17%  Similarity=0.123  Sum_probs=140.6

Q ss_pred             ccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 046907           51 ASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQI  130 (345)
Q Consensus        51 ~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  130 (345)
                      ...+.||+|+||.||+|++   .+..+++|............                   ......+++.+|+.+++++
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~---~~~~~~~k~~~~~~~~~~~~-------------------~~~~~~~~~~~E~~il~~l  396 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY---LDFDVIIKERVKKGYRDERL-------------------DENIRKSRTAREARYLALV  396 (540)
T ss_dssp             ---------CCEEEEEEEC---SSCEEEEEEECCCTTSCHHH-------------------HHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCEEeeCCCEEEEEEEE---CCCeEEEEEEecccccchhh-------------------hhHHHHHHHHHHHHHHHhc
Confidence            3467899999999999975   57889999876533221110                   1122367789999999999


Q ss_pred             cCCCccceeEEEecCCcceeeeeccccCCCCCCCHHH-HHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeE
Q 046907          131 RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLA-RHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEAR  209 (345)
Q Consensus       131 ~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~-~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~k  209 (345)
                      +||||+++..++..++  ..++++||++++++.++.. ...++.|+++||.|||+.+   ++||||||+|||++.  .+|
T Consensus       397 ~h~nIv~~~~~~~~~~--~~~lVmE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~k  469 (540)
T 3en9_A          397 KDFGIPAPYIFDVDLD--NKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLY  469 (540)
T ss_dssp             GGGTCCCCCEEEEETT--TTEEEEECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEE
T ss_pred             CCCCcCceEEEEEeCC--ccEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEE
Confidence            9999995554444444  4589999999887644433 4689999999999999999   999999999999999  999


Q ss_pred             EeccccceecCCCCcce-----eccCcccCccccccccccc--cccCccchhh-HHHHHHHHHhCCCCC
Q 046907          210 ISGFGFARAIPDAHTHI-----TTSNVVGTVEYIAPEYLQM--LTLTEKCDIY-FGALLAGLVMGKLPS  270 (345)
Q Consensus       210 l~Dfg~a~~~~~~~~~~-----~~~~~~gt~~~~aPE~~~~--~~~~~~~Dvw-lG~vl~el~tg~~p~  270 (345)
                      |+|||+++.........     ......||+.|||||++.+  ..|+..+|+| ..+-..+.+.++.+|
T Consensus       470 L~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          470 IIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             ECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             EEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            99999998875432211     1235789999999999987  5678889999 888888877777664


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88  E-value=3.6e-23  Score=182.85  Aligned_cols=166  Identities=13%  Similarity=0.017  Sum_probs=118.9

Q ss_pred             HhhcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           44 LEKKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSE  123 (345)
Q Consensus        44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  123 (345)
                      ......|++.+.||+|+||.||+|++  .+|..||+|.+.....+...........         ...+.......+.+|
T Consensus        86 ~~~~~~~~~~~~iG~G~~g~Vy~~~~--~~g~~valK~~~~~~~~~~~~~~~~~~~---------~~~w~~~~~~~~~~E  154 (282)
T 1zar_A           86 VRSGKVDAIGKLMGEGKESAVFNCYS--EKFGECVVKFHKVGHTSFKKVKEKRDYG---------DLHFSVLAIRSARNE  154 (282)
T ss_dssp             HHTTSCSEEEEEEEECSSEEEEEEEE--TTTEEEEEEEECC------CCCC----------------CHHHHHHHHHHHH
T ss_pred             HhCCeEEEecCEeccCCCceEEEEEe--CCCCEEEEEEEECCCCchhhhhhhhhhc---------chhhHHHHHHHHHHH
Confidence            34555667779999999999999997  4799999999965432211100000000         111112346778899


Q ss_pred             HHHHhhccCCCccceeEEEecCCcceeeeeccccCCCCCCC--HHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCee
Q 046907          124 INTVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELD--WLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVL  201 (345)
Q Consensus       124 ~~~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~l~--~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil  201 (345)
                      +.++++++  | +++++.+..+   ..++++++++++++.+  ......++.|++.||.|||+.+   ++||||||+|||
T Consensus       155 ~~~l~~l~--~-~~v~~~~~~~---~~~lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NIL  225 (282)
T 1zar_A          155 FRALQKLQ--G-LAVPKVYAWE---GNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVL  225 (282)
T ss_dssp             HHHHHHTT--T-SSSCCEEEEE---TTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEE
T ss_pred             HHHHHhcc--C-CCcCeEEecc---ceEEEEEecCCCcHHHcchhhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEE
Confidence            99999998  4 5666555433   3689999998876643  2234579999999999999999   999999999999


Q ss_pred             ecCCCCeEEeccccceecCCCCcceeccCcccCccccccccccc
Q 046907          202 LDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQM  245 (345)
Q Consensus       202 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~  245 (345)
                      ++ ++.+||+|||++..               +..++|||.+.+
T Consensus       226 l~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~r  253 (282)
T 1zar_A          226 VS-EEGIWIIDFPQSVE---------------VGEEGWREILER  253 (282)
T ss_dssp             EE-TTEEEECCCTTCEE---------------TTSTTHHHHHHH
T ss_pred             EE-CCcEEEEECCCCeE---------------CCCCCHHHHHHH
Confidence            99 99999999999863               334678888754


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76  E-value=2.7e-18  Score=149.66  Aligned_cols=156  Identities=15%  Similarity=0.078  Sum_probs=103.4

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCce--eEEeeecCCchhhhhhhh---hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRM--ISIKKIVGPPMDAAALIE---EDSMLLNKKMRQIQSEMLLNKKMRQI  120 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~--vavK~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (345)
                      ...-|++.+.||+|+||.||+|++. .+|..  ||||.+............   .+.......      ..........+
T Consensus        45 ~~~~~~i~~~ig~G~~g~Vy~a~~~-~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~  117 (258)
T 1zth_A           45 KGYITAMGGVISTGKEANVFYADGV-FDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRR------ISPKEKVFIWT  117 (258)
T ss_dssp             TTSEEEEEEEEEECSSEEEEEEEEE-ETTEEEEEEEEEECCC-------GGGTTTCTTSCC----------CHHHHHHHH
T ss_pred             CCCchhhCCEEeecceEEEEEEEEc-CCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhc------cChHHHHHHHH
Confidence            3334788999999999999999862 36888  999998654222110000   000000000      00001224567


Q ss_pred             HHHHHHHhhccCCCc--cceeEEEecCCcceeeeeccccCC-CCCCC----------HHHHHHHHHHHHHHHHHHh-hcC
Q 046907          121 QSEINTVGQIRHRNL--HPLLAHVTRPDCHLLYILNDVSQG-RRELD----------WLARHRIALGLACGLEYLH-MHH  186 (345)
Q Consensus       121 ~~E~~~l~~l~hpni--v~l~~~~~~~~~~~l~~~~~~~~~-~~~l~----------~~~~~~i~~~i~~~l~~lh-~~~  186 (345)
                      .+|+.++..++|+++  ...++.   .   ..+++|+|+++ |...+          ......++.|++.||.||| +.+
T Consensus       118 ~~E~~~l~~l~~~~i~~p~~~~~---~---~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~g  191 (258)
T 1zth_A          118 EKEFRNLERAKEAGVSVPQPYTY---M---KNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAE  191 (258)
T ss_dssp             HHHHHHHHHHHHTTCCCCCEEEE---E---TTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHhCCCCCCeEEEc---C---CCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCC
Confidence            889999999988864  344432   1   35788999942 21111          1245679999999999999 888


Q ss_pred             CCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 046907          187 CPRIIHRDLNPVNVLLDDDIEARISGFGFARAI  219 (345)
Q Consensus       187 ~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~  219 (345)
                         ++||||||+|||++.  .++|+|||+|...
T Consensus       192 ---ivHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          192 ---LVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             ---EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             ---EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence               999999999999998  9999999999754


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61  E-value=1.2e-15  Score=138.76  Aligned_cols=160  Identities=13%  Similarity=0.082  Sum_probs=102.7

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ...-|+++..||+|++|.||+|...  +|+.||||+++....+.............     .....+.....-...+|..
T Consensus        93 rg~iY~I~~~IG~Gk~a~VY~a~d~--~G~~vAvKi~r~~~~sfr~v~~~r~~~~~-----~~~~~~~~~~rl~A~kE~~  165 (397)
T 4gyi_A           93 RKDVYSVGSRIGVGKESDIMIVADE--KGKQKVLKIHRLGRISFRTVKANRDYLRN-----RSTGSWMYLSRLAAIKEFA  165 (397)
T ss_dssp             TTSCSEEEEEEEECSSEEEEEEECT--TCCEEEEEEECTTEECCCCCC--CEECTT-----SCHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEecCEeeeCCceEEEEEECC--CCCEEEEEEEecccccHHHHHHHHHHHHh-----hccccHHHHHHHHHHHHHH
Confidence            4446999999999999999999853  79999999987543332111000000000     0000000111222346777


Q ss_pred             HHhhccCCCccceeEEEecCCcceeeeeccccCCCCC---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeee
Q 046907          126 TVGQIRHRNLHPLLAHVTRPDCHLLYILNDVSQGRRE---LDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLL  202 (345)
Q Consensus       126 ~l~~l~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~---l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~  202 (345)
                      .|.++.+..+....-+.. ..   .+++|+|++|..+   .+......++.|++.+|.+||..|   ++||||||.|||+
T Consensus       166 nL~rL~~~gv~vp~p~~~-~~---~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl  238 (397)
T 4gyi_A          166 FMKALYEEGFPVPEPIAQ-SR---HTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHG---LIHGDFNEFNILI  238 (397)
T ss_dssp             HHHHHHHTTCSCCCEEEE-ET---TEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEE
T ss_pred             HHHHHHhcCCCCCeeeec-cC---ceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEE
Confidence            787775554322111111 11   2689999987543   223345678999999999999998   9999999999999


Q ss_pred             cCCC----------CeEEeccccceec
Q 046907          203 DDDI----------EARISGFGFARAI  219 (345)
Q Consensus       203 ~~~~----------~~kl~Dfg~a~~~  219 (345)
                      +.++          .+.|+||+-+...
T Consensus       239 ~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          239 REEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             EEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             eCCCCcccccccccceEEEEeCCcccC
Confidence            8765          3889999977654


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.11  E-value=1.8e-10  Score=100.06  Aligned_cols=139  Identities=12%  Similarity=0.053  Sum_probs=104.4

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      -++|.+...+|.|+.+.||++..   .+..+++|........                           ....+.+|+.+
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~---~~~~~vlK~~~~~~~~---------------------------~~~~~~~E~~~   62 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVG---ENENLYLKMTDSRYKG---------------------------TTYDVEREKDM   62 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEEC---SSCEEEEEEECGGGTT---------------------------STTCHHHHHHH
T ss_pred             hccceeEeeccCCCCCeEEEEEC---CCCcEEEEeCCcccCC---------------------------CHHHHHHHHHH
Confidence            35799999999999999999974   4678999998532111                           02246678999


Q ss_pred             Hhhc-cCCCccceeEEEecCCcceeeeeccccCCCCCCC----HHHHHHHHHHHHHHHHHHhhcC---------------
Q 046907          127 VGQI-RHRNLHPLLAHVTRPDCHLLYILNDVSQGRRELD----WLARHRIALGLACGLEYLHMHH---------------  186 (345)
Q Consensus       127 l~~l-~hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~l~----~~~~~~i~~~i~~~l~~lh~~~---------------  186 (345)
                      ++.+ ++..+.+++++....+  ..++++++++|..+.+    ......++.+++.++..||+..               
T Consensus        63 l~~l~~~~~vP~v~~~~~~~~--~~~lv~e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~  140 (263)
T 3tm0_A           63 MLWLEGKLPVPKVLHFERHDG--WSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLA  140 (263)
T ss_dssp             HHHHTTTSCCCCEEEEEEETT--EEEEEEECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHH
T ss_pred             HHHHhcCCCCCeEEEEEecCC--ceEEEEEecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHH
Confidence            8888 4677889998887654  6889999999865422    1233478889999999999811               


Q ss_pred             -----------------------------------------CCCeEecCCCCCCeeecCCCCeEEeccccce
Q 046907          187 -----------------------------------------CPRIIHRDLNPVNVLLDDDIEARISGFGFAR  217 (345)
Q Consensus       187 -----------------------------------------~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~  217 (345)
                                                               ...++|+|+++.||+++....+.|+||+.+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          141 ELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             HHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                                     0239999999999999876556799998763


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.00  E-value=1.3e-09  Score=94.10  Aligned_cols=138  Identities=15%  Similarity=0.130  Sum_probs=98.2

Q ss_pred             hcCCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           46 KKGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ...++.+....+.|+.+.||++..  .+|..+++|......                              ...+..|+.
T Consensus        18 ~~~~~~~~~~~~gg~~~~v~~~~~--~~g~~~vlK~~~~~~------------------------------~~~~~~E~~   65 (264)
T 1nd4_A           18 RLFGYDWAQQTIGCSDAAVFRLSA--QGRPVLFVKTDLSGA------------------------------LNELQDEAA   65 (264)
T ss_dssp             TTTTCEEEECSCTTSSCEEEEEEC--TTSCCEEEEEECSCT------------------------------TSCHHHHHH
T ss_pred             hcCCCceEecccCCCCceEEEEec--CCCCeEEEEeCCccc------------------------------chhhhHHHH
Confidence            445677655555777799999974  367789999975421                              123457888


Q ss_pred             HHhhccCCC--ccceeEEEecCCcceeeeeccccCCCCCC-CHHHHHHHHHHHHHHHHHHhhcC----------------
Q 046907          126 TVGQIRHRN--LHPLLAHVTRPDCHLLYILNDVSQGRREL-DWLARHRIALGLACGLEYLHMHH----------------  186 (345)
Q Consensus       126 ~l~~l~hpn--iv~l~~~~~~~~~~~l~~~~~~~~~~~~l-~~~~~~~i~~~i~~~l~~lh~~~----------------  186 (345)
                      +++.+.+.+  +.+++++...++  ..++++++++|..+. +......++.+++..+..||+..                
T Consensus        66 ~l~~l~~~~~~vP~~~~~~~~~~--~~~~v~e~i~G~~l~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~  143 (264)
T 1nd4_A           66 RLSWLATTGVPCAAVLDVVTEAG--RDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIER  143 (264)
T ss_dssp             HHHHHHTTTCCBCCEEEEEECSS--CEEEEEECCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCeEEEeccCCC--CCEEEEEecCCcccCcCcCCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHH
Confidence            888885434  456888776554  478899999887653 11123467788888899998753                


Q ss_pred             ---------------------------------------CCCeEecCCCCCCeeecCCCCeEEeccccce
Q 046907          187 ---------------------------------------CPRIIHRDLNPVNVLLDDDIEARISGFGFAR  217 (345)
Q Consensus       187 ---------------------------------------~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~  217 (345)
                                                             ...++|+|++|.||+++.+..+.++||+.+.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          144 ARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             HHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                                                   0129999999999999877666799999864


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.83  E-value=3.4e-08  Score=89.75  Aligned_cols=140  Identities=12%  Similarity=0.154  Sum_probs=99.6

Q ss_pred             cccccccccCcceeeEEEEecCCCCceeEEeeec--CCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIV--GPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      ..-++.|+.|.++.||+.+.   .+..+++|...  ....                          ......+.+|+.++
T Consensus        40 ~~~~~~l~~G~sn~~y~v~~---~~~~~vlr~~~~p~~~~--------------------------~~~~~~~~~E~~~l   90 (359)
T 3dxp_A           40 PLSVEQFKGGQSNPTFKLVT---PGQTYVMRAKPGPKSKL--------------------------LPSAHAIEREYRVM   90 (359)
T ss_dssp             CCEEEECCC-CCSCEEEEEC---SSCEEEEECCCC------------------------------------CHHHHHHHH
T ss_pred             CceEEEcCCcccceEEEEEE---CCceEEEEeCCCCCCCC--------------------------CCcHHHHHHHHHHH
Confidence            34467899999999999985   34578888874  2110                          01134567799999


Q ss_pred             hhcc--CCCccceeEEEecCCc-ceeeeeccccCCCCC-------CCHHHHHHHHHHHHHHHHHHhhcC-----------
Q 046907          128 GQIR--HRNLHPLLAHVTRPDC-HLLYILNDVSQGRRE-------LDWLARHRIALGLACGLEYLHMHH-----------  186 (345)
Q Consensus       128 ~~l~--hpniv~l~~~~~~~~~-~~l~~~~~~~~~~~~-------l~~~~~~~i~~~i~~~l~~lh~~~-----------  186 (345)
                      +.+.  +..+.+++.++...+. ...++++++++|...       ++......++.+++..|..||...           
T Consensus        91 ~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~  170 (359)
T 3dxp_A           91 DALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGK  170 (359)
T ss_dssp             HHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSC
T ss_pred             HHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCC
Confidence            8886  4567888887765531 246789999988654       245566788999999999999731           


Q ss_pred             --------------------------------------------CCCeEecCCCCCCeeecCCCC--eEEecccccee
Q 046907          187 --------------------------------------------CPRIIHRDLNPVNVLLDDDIE--ARISGFGFARA  218 (345)
Q Consensus       187 --------------------------------------------~~~iiH~dlk~~nil~~~~~~--~kl~Dfg~a~~  218 (345)
                                                                  ...++|+|+++.||+++.++.  +.|.||+.+..
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          171 PGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             CCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                                        135999999999999997653  68999998864


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.52  E-value=2e-07  Score=82.57  Aligned_cols=181  Identities=19%  Similarity=0.203  Sum_probs=110.7

Q ss_pred             ccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-c
Q 046907           53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQI-R  131 (345)
Q Consensus        53 ~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~  131 (345)
                      ++.++.|....||+..      ..+++|....                             ......+.+|+.+++.+ .
T Consensus        25 i~~~~~G~~n~v~~v~------~~~vlR~~~~-----------------------------~~~~~~~~~E~~~l~~l~~   69 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN------RDFIFKFPKH-----------------------------SRGSTNLFNEVNILKRIHN   69 (304)
T ss_dssp             CCEEEECSSEEEEEST------TSEEEEEESS-----------------------------HHHHHHHHHHHHHHHHHTT
T ss_pred             eEecCCCCcceEEEEC------CEEEEEecCC-----------------------------cchHHHHHHHHHHHHHHHh
Confidence            4568999999999863      3588898642                             11245677899999887 3


Q ss_pred             CCC--ccceeEEEecCCc-ceeeeeccccCCCCCC-------CHHHHHHHHHHHHHHHHHHhhcC---------------
Q 046907          132 HRN--LHPLLAHVTRPDC-HLLYILNDVSQGRREL-------DWLARHRIALGLACGLEYLHMHH---------------  186 (345)
Q Consensus       132 hpn--iv~l~~~~~~~~~-~~l~~~~~~~~~~~~l-------~~~~~~~i~~~i~~~l~~lh~~~---------------  186 (345)
                      +..  +.+++......+. ...++++++++|..+.       +......++.+++..+..||+..               
T Consensus        70 ~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~  149 (304)
T 3sg8_A           70 KLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREK  149 (304)
T ss_dssp             SSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHH
T ss_pred             cCCCCCCceEeecCCCCCCCcceEEEcccCCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHH
Confidence            332  3344444333221 2347789999886553       33345678888888888888621               


Q ss_pred             ----------------------------------------CCCeEecCCCCCCeeecC--CCCeEEeccccceecCCCCc
Q 046907          187 ----------------------------------------CPRIIHRDLNPVNVLLDD--DIEARISGFGFARAIPDAHT  224 (345)
Q Consensus       187 ----------------------------------------~~~iiH~dlk~~nil~~~--~~~~kl~Dfg~a~~~~~~~~  224 (345)
                                                              ...++|+|+++.|++++.  ...+.++||+.+........
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~D  229 (304)
T 3sg8_A          150 INEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDND  229 (304)
T ss_dssp             HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHH
T ss_pred             HHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHH
Confidence                                                    134899999999999997  45678999998865322100


Q ss_pred             ceeccCc---ccC---------ccccc-cccccccccCccchhh-HHHHHHHHHhCCCCC
Q 046907          225 HITTSNV---VGT---------VEYIA-PEYLQMLTLTEKCDIY-FGALLAGLVMGKLPS  270 (345)
Q Consensus       225 ~~~~~~~---~gt---------~~~~a-PE~~~~~~~~~~~Dvw-lG~vl~el~tg~~p~  270 (345)
                      .......   .+.         .+... |+....  ...-.+.| +|.++|.+.+|..+|
T Consensus       230 l~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          230 FISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence            0000000   000         00111 222111  11225788 999999999999874


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.33  E-value=5.5e-06  Score=73.83  Aligned_cols=129  Identities=14%  Similarity=0.177  Sum_probs=93.2

Q ss_pred             CcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046907           49 GLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVG  128 (345)
Q Consensus        49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~  128 (345)
                      .+...+.++.|..+.||+.      |..+++|....                             ......+.+|..+++
T Consensus        38 ~i~~v~~l~~G~~n~vy~v------g~~~vlR~~~~-----------------------------~~~~~~~~~E~~~L~   82 (320)
T 3r70_A           38 KINELRYLSSGDDSDTFLC------NEQYVVKVPKR-----------------------------DSVRISQKRELELYR   82 (320)
T ss_dssp             CCSCEEEEEECSSEEEEEE------TTTEEEEEESS-----------------------------HHHHHHHHHHHHHHH
T ss_pred             ceEEEEeCCCCCCceEEEE------CCEEEEEeCCc-----------------------------HHHHHHHHHHHHHHH
Confidence            5666788999999999987      44588887642                             111344778998888


Q ss_pred             hccC----CCccceeEEEecCCcceeeeeccccCCCCCC-------CHHHHHHHHHHHHHHHHHHhhcCC----------
Q 046907          129 QIRH----RNLHPLLAHVTRPDCHLLYILNDVSQGRREL-------DWLARHRIALGLACGLEYLHMHHC----------  187 (345)
Q Consensus       129 ~l~h----pniv~l~~~~~~~~~~~l~~~~~~~~~~~~l-------~~~~~~~i~~~i~~~l~~lh~~~~----------  187 (345)
                      .+.+    ..+.+++++    +  ..++++++++|..+.       +......++.+++..+..||+...          
T Consensus        83 ~L~~~~~~~~vP~v~~~----~--~~~lvme~i~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~  156 (320)
T 3r70_A           83 FLENCKLSYQIPAVVYQ----S--DRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDA  156 (320)
T ss_dssp             HHTTSCCSSBCCCEEEE----C--SSCEEEECCCCBCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTT
T ss_pred             HHHhcCCCCCcceEEec----C--CcEEEEeecCCccccccccccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccc
Confidence            8865    224455544    2  357889999887654       344456788888888888885442          


Q ss_pred             --------------------------------------------------CCeEecCCCCCCeeecCCCCeEEeccccce
Q 046907          188 --------------------------------------------------PRIIHRDLNPVNVLLDDDIEARISGFGFAR  217 (345)
Q Consensus       188 --------------------------------------------------~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~  217 (345)
                                                                        ..++|+|+++.|++++....+.+.||+.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~  236 (320)
T 3r70_A          157 LVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFN  236 (320)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCE
T ss_pred             cccchHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccc
Confidence                                                              125999999999999986667999999886


Q ss_pred             e
Q 046907          218 A  218 (345)
Q Consensus       218 ~  218 (345)
                      .
T Consensus       237 ~  237 (320)
T 3r70_A          237 V  237 (320)
T ss_dssp             E
T ss_pred             c
Confidence            4


No 261
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.90  E-value=5.4e-05  Score=66.30  Aligned_cols=76  Identities=13%  Similarity=0.146  Sum_probs=53.1

Q ss_pred             cccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046907           50 LASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQ  129 (345)
Q Consensus        50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  129 (345)
                      ..-.+.||.|.++.||+++..  +|..+++|........                           ....+..|+..|+.
T Consensus        17 ~~~~~~l~gG~~n~vy~v~~~--dG~~~vvK~~~~~~~~---------------------------~~~~~~~E~~~L~~   67 (288)
T 3d1u_A           17 VAAVAERGHSHRWHLYRVELA--DGTPLFVKALPDDAPA---------------------------LDGLFRAEALGLDW   67 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEET--TSCEEEEEECCTTCCC---------------------------CTTHHHHHHHHHHH
T ss_pred             ccceeeeCCcchhheEEEEeC--CCCeEEEEecCCCCcc---------------------------hhHHHHHHHHHHHH
Confidence            344678999999999999863  6889999996432110                           02456789999999


Q ss_pred             ccCC---CccceeEEEecCCcceeeeeccccCCC
Q 046907          130 IRHR---NLHPLLAHVTRPDCHLLYILNDVSQGR  160 (345)
Q Consensus       130 l~hp---niv~l~~~~~~~~~~~l~~~~~~~~~~  160 (345)
                      +.+.   .+.+++++.   .   -++++++++++
T Consensus        68 L~~~~~v~vP~v~~~~---~---~~lvme~l~g~   95 (288)
T 3d1u_A           68 LGRSFGSPVPQVAGWD---D---RTLAMEWVDER   95 (288)
T ss_dssp             HTCSTTCCSCCEEEEE---T---TEEEEECCCCC
T ss_pred             HHhcCCCCcCeEEEec---C---cEEEEEecccC
Confidence            9765   477777653   1   45666777664


No 262
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.89  E-value=0.00021  Score=63.04  Aligned_cols=130  Identities=22%  Similarity=0.188  Sum_probs=86.2

Q ss_pred             ccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 046907           53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIRH  132 (345)
Q Consensus        53 ~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h  132 (345)
                      ...++.|....||+.      |..+++|....                             ......+..|+.+|+.+.+
T Consensus        24 v~~l~~G~~n~v~~v------g~~~VlR~~~~-----------------------------~~~~~~~~~E~~~L~~L~~   68 (306)
T 3tdw_A           24 VESLGEGFRNYAILV------NGDWVFRFPKS-----------------------------QQGADELNKEIQLLPLLVG   68 (306)
T ss_dssp             EEEEEECSSEEEEEE------TTTEEEEEESS-----------------------------HHHHHHHHHHHHHHHHHTT
T ss_pred             eeecCCCcceeEEEE------CCEEEEEecCC-----------------------------chHHHHHHHHHHHHHHHHh
Confidence            456888999999987      34577888532                             1224567889999999864


Q ss_pred             C---CccceeEEEecCCcceeeeeccccCCCCCC-------CHHHHHHHHHHHHHHHHHHhhcC----------------
Q 046907          133 R---NLHPLLAHVTRPDCHLLYILNDVSQGRREL-------DWLARHRIALGLACGLEYLHMHH----------------  186 (345)
Q Consensus       133 p---niv~l~~~~~~~~~~~l~~~~~~~~~~~~l-------~~~~~~~i~~~i~~~l~~lh~~~----------------  186 (345)
                      .   .+.+.+.+....+ ...++++++++|..+.       +......++.++...|..||+..                
T Consensus        69 ~~~v~VP~~~~~~~~~~-g~~~~v~e~i~G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~  147 (306)
T 3tdw_A           69 CVKVNIPQYVYIGKRSD-GNPFVGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKN  147 (306)
T ss_dssp             TCSSBCCCEEEEEECTT-SCEEEEEECCCSEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHH
T ss_pred             cCCCCCCCeEeecccCC-CceEEEEeccCCeECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHH
Confidence            2   2556666654222 2456899999886442       22334455555655555555432                


Q ss_pred             -----------------------------------------CCCeEecCCCCCCeeecC---CCC-eEEecccccee
Q 046907          187 -----------------------------------------CPRIIHRDLNPVNVLLDD---DIE-ARISGFGFARA  218 (345)
Q Consensus       187 -----------------------------------------~~~iiH~dlk~~nil~~~---~~~-~kl~Dfg~a~~  218 (345)
                                                               ...++|+|+.+.|++++.   ++. +.|+||+.+..
T Consensus       148 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          148 KILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                                                     124799999999999987   455 47999997754


No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.78  E-value=0.00023  Score=64.48  Aligned_cols=136  Identities=13%  Similarity=0.138  Sum_probs=88.5

Q ss_pred             CCcccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           48 GGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTV  127 (345)
Q Consensus        48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  127 (345)
                      +.......++.|....+|+.+.   ++..+++|.....                                ..+..|+.++
T Consensus        41 ~~~~~i~~l~gG~~n~~y~v~~---~g~~~vlK~~~~~--------------------------------~~~~~E~~~l   85 (362)
T 3ovc_A           41 DSVSDLMQLSEGEESRAFSFDV---GGRGYVLRVNSCA--------------------------------DGFYKDRYVY   85 (362)
T ss_dssp             SCCEEEEEEEECSSEEEEEEEE---TTEEEEEEEESCC--------------------------------HHHHHHHHHH
T ss_pred             CCCceEEECCCCCcceEEEEEE---CCcEEEEEeCCch--------------------------------hhHHHHHHHH
Confidence            3455567889999999999874   5778899987431                                1356778888


Q ss_pred             hhccCCC--ccceeEEEecCCcceeeeeccccCCCCCC--CHHHHHHHHHHHHHHHHHHhhcC-----------------
Q 046907          128 GQIRHRN--LHPLLAHVTRPDCHLLYILNDVSQGRREL--DWLARHRIALGLACGLEYLHMHH-----------------  186 (345)
Q Consensus       128 ~~l~hpn--iv~l~~~~~~~~~~~l~~~~~~~~~~~~l--~~~~~~~i~~~i~~~l~~lh~~~-----------------  186 (345)
                      +.+....  +.+++.+....+ ...++++++++|..+.  +......++.+++..|.-||...                 
T Consensus        86 ~~L~~~gvpvP~vl~~~~~~~-g~~~lv~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~  164 (362)
T 3ovc_A           86 RHFASAALPIPEVLDIGEFSE-SLTYCISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQ  164 (362)
T ss_dssp             HHHCCSSSCCCCEEEEEESSS-SCEEEEEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEE
T ss_pred             HHHHhcCCCCceEEEeccCCC-CCeEEEEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCc
Confidence            8775433  556777666543 3567788888764332  11112223334444444444321                 


Q ss_pred             -----------------------------------------------CCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 046907          187 -----------------------------------------------CPRIIHRDLNPVNVLLDDDIEARISGFGFARAI  219 (345)
Q Consensus       187 -----------------------------------------------~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~  219 (345)
                                                                     .+.++|+|+.+.|++++....+.|.||+.+..-
T Consensus       165 ~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g  244 (362)
T 3ovc_A          165 YTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG  244 (362)
T ss_dssp             ESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence                                                           034799999999999987777889999987653


No 264
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.77  E-value=0.0003  Score=60.66  Aligned_cols=137  Identities=18%  Similarity=0.204  Sum_probs=88.9

Q ss_pred             cCCcccccccccCcce-eeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           47 KGGLASLEKIGSGGCG-EVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEIN  125 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g-~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  125 (345)
                      ...|.. +.+..|..| .||+.... ..+..+.+|.-..                              .....+..|..
T Consensus        24 l~g~~~-~~~~~G~S~~~v~rl~~~-~~~~~~~lk~~~~------------------------------~~~~~~~~E~~   71 (272)
T 4gkh_A           24 LYGYRW-ARDNVGQSGATIYRLYGK-PNAPELFLKHGKG------------------------------SVANDVTDEMV   71 (272)
T ss_dssp             HTTCEE-EEEECSSSSCEEEEEECC-TTCCCEEEEEEET------------------------------HHHHHHHHHHH
T ss_pred             ccCCeE-EEccCCCcCCeEEEEEec-CCCeEEEEEECCC------------------------------CCHhHHHHHHH
Confidence            334544 334445544 68987643 3566788998642                              11344667888


Q ss_pred             HHhhcc-CCCccceeEEEecCCcceeeeeccccCCCCCCCH-----HHHHHHHHHHHHHHHHHhhcCC------------
Q 046907          126 TVGQIR-HRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDW-----LARHRIALGLACGLEYLHMHHC------------  187 (345)
Q Consensus       126 ~l~~l~-hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-----~~~~~i~~~i~~~l~~lh~~~~------------  187 (345)
                      .|+.+. +--+.++++++..++  ..+++|++++|....+.     .....+..++...|.-||....            
T Consensus        72 ~l~~l~~~vPVP~v~~~~~~~~--~~~lvme~l~G~~~~~~~~~~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~  149 (272)
T 4gkh_A           72 RLNWLTAFMPLPTIKHFIRTPD--DAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFR  149 (272)
T ss_dssp             HHHHHTTTSCCCCEEEEEEETT--EEEEEEECCCSEEHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHH
T ss_pred             HHHHhccCCCcCeEEEEEEECC--eEEEEEEeeCCccccccccCCHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccc
Confidence            888773 323667888777665  57889999988543211     1223456666666666665321            


Q ss_pred             -------------------------------------------CCeEecCCCCCCeeecCCCCeEEeccccce
Q 046907          188 -------------------------------------------PRIIHRDLNPVNVLLDDDIEARISGFGFAR  217 (345)
Q Consensus       188 -------------------------------------------~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~  217 (345)
                                                                 ..++|+|+.+.|++++..+.+-|.||+.+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          150 LAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             HHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             hhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence                                                       238999999999999987667799999764


No 265
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.40  E-value=0.0006  Score=62.38  Aligned_cols=30  Identities=23%  Similarity=0.378  Sum_probs=25.3

Q ss_pred             CCeEecCCCCCCeeecCCCCeEEecccccee
Q 046907          188 PRIIHRDLNPVNVLLDDDIEARISGFGFARA  218 (345)
Q Consensus       188 ~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~  218 (345)
                      ..++|+|+.+.|++++.+ .+.+.||..+..
T Consensus       227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~  256 (397)
T 2olc_A          227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFY  256 (397)
T ss_dssp             CEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             CceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence            359999999999999876 489999987754


No 266
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.37  E-value=0.00054  Score=61.62  Aligned_cols=31  Identities=19%  Similarity=0.218  Sum_probs=25.5

Q ss_pred             CCeEecCCCCCCeeecCCCCeEEecccccee
Q 046907          188 PRIIHRDLNPVNVLLDDDIEARISGFGFARA  218 (345)
Q Consensus       188 ~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~  218 (345)
                      ..++|+|+.+.||+++....+.|+||+.+..
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            3599999999999999644578999998753


No 267
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.19  E-value=0.0039  Score=55.00  Aligned_cols=75  Identities=12%  Similarity=0.096  Sum_probs=52.7

Q ss_pred             ccccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 046907           51 ASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQI  130 (345)
Q Consensus        51 ~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  130 (345)
                      .-.+.|+.|....+|+.+.   ++..+.+|.....                              ....+..|+..|+.+
T Consensus        39 ~~~~~l~gG~~n~~y~v~~---~~~~~vlK~~~~~------------------------------~~~~~~~E~~~L~~L   85 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLIND---EVQTVFVKINERS------------------------------YRSMFRAEADQLALL   85 (312)
T ss_dssp             CEEEEECCSSSSEEEEEES---SSCEEEEEEEEGG------------------------------GHHHHHHHHHHHHHH
T ss_pred             eeeEEeCCccceeeeEEEE---CCCeEEEEeCCcc------------------------------cHHHHHHHHHHHHHH
Confidence            3356789999999999874   4667888986421                              134567788888877


Q ss_pred             c---CCCccceeEEEecCCcceeeeeccccCCC
Q 046907          131 R---HRNLHPLLAHVTRPDCHLLYILNDVSQGR  160 (345)
Q Consensus       131 ~---hpniv~l~~~~~~~~~~~l~~~~~~~~~~  160 (345)
                      .   ...+.+++.+...++  ..+++++++++.
T Consensus        86 ~~~~~v~VP~vl~~~~~~g--~~~lvme~l~G~  116 (312)
T 3jr1_A           86 AKTNSINVPLVYGIGNSQG--HSFLLLEALNKS  116 (312)
T ss_dssp             HHTTSSBCCCEEEEEECSS--EEEEEEECCCCC
T ss_pred             HhhCCCCcceEEEEeecCC--ceEEEEEeccCC
Confidence            3   356778888776554  567777777663


No 268
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.18  E-value=0.0076  Score=53.45  Aligned_cols=30  Identities=20%  Similarity=0.375  Sum_probs=26.6

Q ss_pred             CCeEecCCCCCCeeecCCCCeEEeccccce
Q 046907          188 PRIIHRDLNPVNVLLDDDIEARISGFGFAR  217 (345)
Q Consensus       188 ~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~  217 (345)
                      ..++|+|+.+.|++++.++.+.++||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            359999999999999877889999999764


No 269
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.11  E-value=0.0023  Score=55.72  Aligned_cols=36  Identities=19%  Similarity=0.336  Sum_probs=29.3

Q ss_pred             cCCcccccccccCcceeeEEEEecCCCCceeEEeeecC
Q 046907           47 KGGLASLEKIGSGGCGEVYKAELPGQNGRMISIKKIVG   84 (345)
Q Consensus        47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~   84 (345)
                      .....-.+.+|.|..+.||+.+..  +|+.|.+|....
T Consensus        14 G~~v~~v~~~g~G~~~~vyrv~l~--DG~~~~vK~~~~   49 (288)
T 3f7w_A           14 GREVAAVAERGHSHRWHLYRVELA--DGTPLFVKALPD   49 (288)
T ss_dssp             CCCEEEEEEEEEETTEEEEEEEET--TSCEEEEEECCT
T ss_pred             CCCeEEEEecCCCCCeEEEEEEEC--CCCEEEEEEeCC
Confidence            345666788999999999999874  789999998654


No 270
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.70  E-value=0.0099  Score=51.95  Aligned_cols=126  Identities=11%  Similarity=-0.020  Sum_probs=76.8

Q ss_pred             ccccccCcceeeEEEEecCCCCceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Q 046907           53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINTVGQIR-  131 (345)
Q Consensus        53 ~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-  131 (345)
                      ++.|+.|....+|+.       ..+.+|........                            .-....|+.+++.+. 
T Consensus        23 i~~l~gG~tN~~~~~-------~~~vlR~~~~~~~~----------------------------~~~r~~E~~~l~~l~~   67 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-------GDLCLRIPGKGTEE----------------------------YINRANEAVAAREAAK   67 (301)
T ss_dssp             CEEEESCSSEEEEEE-------TTEEEEEECC--------------------------------CCCHHHHHHHHHHHHH
T ss_pred             eeEcCCcccccccee-------eeEEEECCCCCccc----------------------------eeCHHHHHHHHHHHHH
Confidence            678899999999998       34778887532100                            011134666666663 


Q ss_pred             CCCccceeEEEecCCcceeeeeccccCCCCCCCHHHHH---HHHHHHHHHHHHHhhcCC---------------------
Q 046907          132 HRNLHPLLAHVTRPDCHLLYILNDVSQGRRELDWLARH---RIALGLACGLEYLHMHHC---------------------  187 (345)
Q Consensus       132 hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~---~i~~~i~~~l~~lh~~~~---------------------  187 (345)
                      +.-..++++.....    -+++++++.+|..++.....   .++.++++.|.-+|+...                     
T Consensus        68 ~g~~P~~~~~~~~~----~~~v~e~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~  143 (301)
T 3dxq_A           68 AGVSPEVLHVDPAT----GVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLST  143 (301)
T ss_dssp             TTSSCCEEEECTTT----CCEEEECCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC-
T ss_pred             cCCCCceEEEECCC----CEEEEeecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhh
Confidence            22224666543222    24667888444444433222   255666666666776431                     


Q ss_pred             -----------------------------CCeEecCCCCCCeeecCCCCeEEecccccee
Q 046907          188 -----------------------------PRIIHRDLNPVNVLLDDDIEARISGFGFARA  218 (345)
Q Consensus       188 -----------------------------~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~  218 (345)
                                                   ..++|+|+.+.|++ ..++.+.++||..+..
T Consensus       144 ~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          144 KNVTLPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             -CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             cCCCchhhHHHHHHHHHHHHHHHHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence                                         23799999999999 5566789999987764


No 271
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.50  E-value=0.012  Score=54.20  Aligned_cols=30  Identities=23%  Similarity=0.357  Sum_probs=26.3

Q ss_pred             CCeEecCCCCCCeeecCCCCeEEecccccee
Q 046907          188 PRIIHRDLNPVNVLLDDDIEARISGFGFARA  218 (345)
Q Consensus       188 ~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~  218 (345)
                      ..++|+|+++.||+++.++ +.+.||+.+..
T Consensus       232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            3599999999999998776 99999998865


No 272
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.04  E-value=0.031  Score=51.56  Aligned_cols=31  Identities=10%  Similarity=0.225  Sum_probs=22.9

Q ss_pred             ccccccCcceeeEEEEecCC------CCceeEEeeec
Q 046907           53 LEKIGSGGCGEVYKAELPGQ------NGRMISIKKIV   83 (345)
Q Consensus        53 ~~~iG~G~~g~V~~~~~~~~------~~~~vavK~~~   83 (345)
                      +..|+.|....||++.....      ++..+.+|+..
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~  114 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF  114 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeC
Confidence            46788899999999986421      24678899874


No 273
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=95.96  E-value=0.02  Score=50.34  Aligned_cols=29  Identities=34%  Similarity=0.368  Sum_probs=25.0

Q ss_pred             CeEecCCCCCCeeecCCCCeEEeccccce
Q 046907          189 RIIHRDLNPVNVLLDDDIEARISGFGFAR  217 (345)
Q Consensus       189 ~iiH~dlk~~nil~~~~~~~kl~Dfg~a~  217 (345)
                      .++|+|+.+.|++++.+..+.++||+.+.
T Consensus       188 ~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          188 GVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            49999999999999987556799998764


No 274
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.92  E-value=0.036  Score=50.18  Aligned_cols=30  Identities=20%  Similarity=0.318  Sum_probs=25.8

Q ss_pred             CCeEecCCCCCCeeecCC----CCeEEeccccce
Q 046907          188 PRIIHRDLNPVNVLLDDD----IEARISGFGFAR  217 (345)
Q Consensus       188 ~~iiH~dlk~~nil~~~~----~~~kl~Dfg~a~  217 (345)
                      ..++|+|+.+.|++++.+    +.+.++||..+.
T Consensus       220 ~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          220 VVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             EEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             cEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            359999999999999876    688999998775


No 275
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.82  E-value=0.052  Score=47.76  Aligned_cols=28  Identities=25%  Similarity=0.258  Sum_probs=24.4

Q ss_pred             CeEecCCCCCCeeecCCCCeEEecccccee
Q 046907          189 RIIHRDLNPVNVLLDDDIEARISGFGFARA  218 (345)
Q Consensus       189 ~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~  218 (345)
                      .++|+|+++.||+++ + .+.+.||+.+..
T Consensus       196 ~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          196 LRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             EECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             eeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            489999999999999 4 899999987754


No 276
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=95.19  E-value=0.047  Score=48.25  Aligned_cols=32  Identities=22%  Similarity=0.262  Sum_probs=27.0

Q ss_pred             CCeEecCCCCCCeeecCC----CCeEEeccccceec
Q 046907          188 PRIIHRDLNPVNVLLDDD----IEARISGFGFARAI  219 (345)
Q Consensus       188 ~~iiH~dlk~~nil~~~~----~~~kl~Dfg~a~~~  219 (345)
                      ..++|+|+.+.|++++.+    ..+.+.||+.+..-
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            359999999999999874    67899999987653


No 277
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.08  E-value=0.11  Score=48.15  Aligned_cols=30  Identities=13%  Similarity=0.012  Sum_probs=20.5

Q ss_pred             ccccccCcceeeEEEEecCCCCceeEEeeec
Q 046907           53 LEKIGSGGCGEVYKAELPGQNGRMISIKKIV   83 (345)
Q Consensus        53 ~~~iG~G~~g~V~~~~~~~~~~~~vavK~~~   83 (345)
                      +..|+.|....+|++.... .+..+.+|+..
T Consensus       113 i~~lsgG~tN~~y~v~~~~-~~~~~vLRi~g  142 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMS-KQAKYLIRLYG  142 (458)
T ss_dssp             EEEECC--CEEEEEEEETT-TTEEEEEEEEC
T ss_pred             EEEcCCCeEeEEEEEEECC-CCceEEEEECC
Confidence            4568888899999998641 24678888874


No 278
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=94.64  E-value=0.099  Score=46.93  Aligned_cols=28  Identities=21%  Similarity=0.420  Sum_probs=23.6

Q ss_pred             CeEecCCCCCCeeecCCCCeEEeccccce
Q 046907          189 RIIHRDLNPVNVLLDDDIEARISGFGFAR  217 (345)
Q Consensus       189 ~iiH~dlk~~nil~~~~~~~kl~Dfg~a~  217 (345)
                      .++|+|+.+.||+++.+. +.++||..+.
T Consensus       213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            499999999999998654 8999998775


No 279
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.20  E-value=0.15  Score=45.31  Aligned_cols=31  Identities=19%  Similarity=0.222  Sum_probs=26.9

Q ss_pred             CCeEecCCCCCCeeecCCCCeEEecccccee
Q 046907          188 PRIIHRDLNPVNVLLDDDIEARISGFGFARA  218 (345)
Q Consensus       188 ~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~  218 (345)
                      ..++|+|+.+.|++++.++.+.+.||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            3599999999999999877899999987654


No 280
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=93.48  E-value=0.015  Score=54.29  Aligned_cols=65  Identities=5%  Similarity=-0.005  Sum_probs=19.7

Q ss_pred             ccccccccCcceeeEEEEecCCCCceeEE------eeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           51 ASLEKIGSGGCGEVYKAELPGQNGRMISI------KKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEI  124 (345)
Q Consensus        51 ~~~~~iG~G~~g~V~~~~~~~~~~~~vav------K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  124 (345)
                      .+.+.||   ||+||+|.++. ...+||+      |......                         ...+....+.+|.
T Consensus       145 ~l~~~lG---fG~v~~g~~~~-~~~~Vav~~~~~~K~~~~~~-------------------------~~~e~~~~~~rea  195 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYK-KHMPVLKETHDERDSTGQDG-------------------------VSEKRLTSLVRRA  195 (463)
T ss_dssp             CSTTTSS---BCCC----------CCBGGGC-------------------------------------------------
T ss_pred             cccccCC---chhhhcccccc-cCCchhhhhccCcccccccc-------------------------ccccccccccccc
Confidence            5667787   99999999863 2457888      5443211                         1123356678899


Q ss_pred             HHHhhccCCCccceeEEEec
Q 046907          125 NTVGQIRHRNLHPLLAHVTR  144 (345)
Q Consensus       125 ~~l~~l~hpniv~l~~~~~~  144 (345)
                      .+.+.++|||+++.+++...
T Consensus       196 ~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          196 TLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             -----------CBCCCEEEE
T ss_pred             cccccccccccCCCcceEEe
Confidence            99999999999999987653


No 281
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=93.40  E-value=1.3  Score=36.39  Aligned_cols=88  Identities=10%  Similarity=0.006  Sum_probs=54.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccc
Q 046907          160 RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIA  239 (345)
Q Consensus       160 ~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~a  239 (345)
                      +..++..+++.++.|.+.+|.-+-.+. .+ ..+=..|..+++..+|.+.+.+ +.+.              .....+.|
T Consensus        43 ~~PlsEEqaWALc~Qc~~~L~~~~~~~-~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------------~~~~~~~~  105 (229)
T 2yle_A           43 NQPINEEQAWAVCYQCCGSLRAAARRR-QP-RHRVRSAAQIRVWRDGAVTLAP-AADD--------------AGEPPPVA  105 (229)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTT-CC-CCCCCSGGGEEEETTSCEEECC-C-------------------------
T ss_pred             CCCcCHHHHHHHHHHHHHHHHhhhhcc-cC-CceecCCcceEEecCCceeccc-cccc--------------ccccCCCC
Confidence            567889999999999999887663211 01 1223346888899998888764 1110              11234567


Q ss_pred             cccccccccCccchhh-HHHHHHHHHh
Q 046907          240 PEYLQMLTLTEKCDIY-FGALLAGLVM  265 (345)
Q Consensus       240 PE~~~~~~~~~~~Dvw-lG~vl~el~t  265 (345)
                      ||... ...+.+.=|| +|+++|.-+-
T Consensus       106 pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A          106 GKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             -CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             hhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence            88764 2445677899 9999998775


No 282
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.35  E-value=0.31  Score=44.31  Aligned_cols=30  Identities=20%  Similarity=0.289  Sum_probs=25.8

Q ss_pred             CCeEecCCCCCCeeecCC------CCeEEeccccce
Q 046907          188 PRIIHRDLNPVNVLLDDD------IEARISGFGFAR  217 (345)
Q Consensus       188 ~~iiH~dlk~~nil~~~~------~~~kl~Dfg~a~  217 (345)
                      ..++|+|+.+.||+++.+      +.+.++||..+.
T Consensus       244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             eeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence            359999999999999876      789999998764


No 283
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=75.31  E-value=11  Score=30.71  Aligned_cols=112  Identities=13%  Similarity=0.097  Sum_probs=73.0

Q ss_pred             cCCCccceeEEEecCCcceeeeeccccCC------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCeeecC
Q 046907          131 RHRNLHPLLAHVTRPDCHLLYILNDVSQG------RRELDWLARHRIALGLACGLEYLHMHHCPRIIHRDLNPVNVLLDD  204 (345)
Q Consensus       131 ~hpniv~l~~~~~~~~~~~l~~~~~~~~~------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~iiH~dlk~~nil~~~  204 (345)
                      .||+.+.. .+-..++  .+.+....-+.      -...+...+.+++..++....+++.     -+|--+.|+|++++.
T Consensus        43 ~~~~Fl~~-~I~e~eD--~v~~~y~~~~~~~~f~~ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f~~  114 (215)
T 4ann_A           43 HSPYFIDA-ELTELRD--SFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFFTR  114 (215)
T ss_dssp             CCTTBCCE-EEEECSS--EEEEEECCCTTSEEGGGGGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEECT
T ss_pred             cCCcccce-EEEEccc--EEEEEEEcCcccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEEcC
Confidence            78888877 4444444  33332222222      1235666778899888876644443     478889999999999


Q ss_pred             CCCeEEeccccceecCCCCcceeccCcccCccccccccccccccCccchhh--HHHHHHHHHhCCCCCccccc
Q 046907          205 DIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPEYLQMLTLTEKCDIY--FGALLAGLVMGKLPSDKFFQ  275 (345)
Q Consensus       205 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~Dvw--lG~vl~el~tg~~p~~~~~~  275 (345)
                      ++.+++.-.|+...                   ++|.     . ....|.|  +=+++..+++++..|+....
T Consensus       115 ~~~p~i~~RGik~~-------------------l~P~-----~-~~ee~fL~qyKAliiall~~K~~Fe~l~~  162 (215)
T 4ann_A          115 DGLPIAKTRGLQNV-------------------VDPL-----P-VSEAEFLTRYKALVICAFNEKQSFDALVE  162 (215)
T ss_dssp             TSCEEESCCEETTT-------------------BSCC-----C-CCHHHHHHHHHHHHHHHHCTTCCHHHHHH
T ss_pred             CCCEEEEEccCccC-------------------CCCC-----C-CCHHHHHHHHHHHHHHHHcCCCCHHHHHc
Confidence            99999988776421                   1221     1 1234556  77888889999999766544


No 284
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=65.32  E-value=3.4  Score=37.34  Aligned_cols=29  Identities=21%  Similarity=0.374  Sum_probs=24.2

Q ss_pred             eEecCCCCCCeee------cCCCCeEEecccccee
Q 046907          190 IIHRDLNPVNVLL------DDDIEARISGFGFARA  218 (345)
Q Consensus       190 iiH~dlk~~nil~------~~~~~~kl~Dfg~a~~  218 (345)
                      ++|+|+.+.||++      +....+.++||-.|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            6799999999999      3456799999988753


No 285
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=59.69  E-value=4.3  Score=37.04  Aligned_cols=30  Identities=20%  Similarity=0.359  Sum_probs=25.9

Q ss_pred             CCeEecCCCCCCeeecCCCCeEEecccccee
Q 046907          188 PRIIHRDLNPVNVLLDDDIEARISGFGFARA  218 (345)
Q Consensus       188 ~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~  218 (345)
                      ..++|+|+.+.|++ +.++.+.++||..+..
T Consensus       262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             EEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             ceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            35999999999999 7778899999988753


No 286
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=59.63  E-value=8.2  Score=31.61  Aligned_cols=80  Identities=18%  Similarity=0.225  Sum_probs=55.4

Q ss_pred             CCHHHHHHHHHHHHHHHH-HHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCcceeccCcccCccccccc
Q 046907          163 LDWLARHRIALGLACGLE-YLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFARAIPDAHTHITTSNVVGTVEYIAPE  241 (345)
Q Consensus       163 l~~~~~~~i~~~i~~~l~-~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~~~aPE  241 (345)
                      ++...+.+++..++.... +++.     -+|--+.|+|++++.++.+++.-.|+-..                   ++|.
T Consensus        82 ~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~-------------------lpP~  137 (219)
T 4ano_A           82 TTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHVGVKES-------------------LPPD  137 (219)
T ss_dssp             SCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCCEETTT-------------------BSSC
T ss_pred             cCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEcCCccc-------------------CCCC
Confidence            556667788888876555 4433     57888999999999999999988886422                   2222


Q ss_pred             cccccccCccchhh--HHHHHHHHHhCCCCCcc
Q 046907          242 YLQMLTLTEKCDIY--FGALLAGLVMGKLPSDK  272 (345)
Q Consensus       242 ~~~~~~~~~~~Dvw--lG~vl~el~tg~~p~~~  272 (345)
                      -      ....|.|  +=+++..++.++..|+.
T Consensus       138 e------~~ee~fl~qyKali~all~~K~~Fe~  164 (219)
T 4ano_A          138 E------WDDERLLREVKATVLALTEGEYRFDE  164 (219)
T ss_dssp             S------CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred             C------CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence            1      1234556  77778888888887654


No 287
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=58.76  E-value=0.64  Score=43.40  Aligned_cols=30  Identities=17%  Similarity=0.117  Sum_probs=26.1

Q ss_pred             HHHHHHHHHHHhhccCCCccceeEEEecCC
Q 046907          117 MRQIQSEINTVGQIRHRNLHPLLAHVTRPD  146 (345)
Q Consensus       117 ~~~~~~E~~~l~~l~hpniv~l~~~~~~~~  146 (345)
                      ...|..|++.+.+++|+|+|+++|+|.++.
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~  352 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRTVI  352 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence            568999999999999999999999998765


No 288
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=43.74  E-value=18  Score=25.63  Aligned_cols=35  Identities=20%  Similarity=0.109  Sum_probs=30.4

Q ss_pred             CcHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 046907          307 GCEEQMLLVLKIACFCTLEDPNERPNSKDVRRMLS  341 (345)
Q Consensus       307 ~~~~~~~~l~~li~~Cl~~dp~~Rpt~~~ll~~L~  341 (345)
                      ..++.+..+.+.|..+|..+|.+..|+.++.+.|.
T Consensus        44 ktpe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l~   78 (104)
T 2fq3_A           44 KTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVS   78 (104)
T ss_dssp             SCHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHSC
T ss_pred             CCHHHHHHHHHHHHHHHHhCCceeeeHHHHHHHcc
Confidence            45777888999999999999999999999988763


No 289
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=40.67  E-value=14  Score=21.71  Aligned_cols=6  Identities=17%  Similarity=0.147  Sum_probs=2.2

Q ss_pred             HHHhcC
Q 046907           19 VRRVGR   24 (345)
Q Consensus        19 ~~~~~~   24 (345)
                      ++|+++
T Consensus        35 RRRr~~   40 (44)
T 2l2t_A           35 RRKSIK   40 (44)
T ss_dssp             HTTCSS
T ss_pred             hhhhhh
Confidence            333333


No 290
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=38.43  E-value=70  Score=28.94  Aligned_cols=100  Identities=13%  Similarity=0.154  Sum_probs=60.3

Q ss_pred             ccccccCcceeeEEEEecCCC------CceeEEeeecCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046907           53 LEKIGSGGCGEVYKAELPGQN------GRMISIKKIVGPPMDAAALIEEDSMLLNKKMRQIQSEMLLNKKMRQIQSEINT  126 (345)
Q Consensus        53 ~~~iG~G~~g~V~~~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  126 (345)
                      +..+..|....+|+......+      +..+.+|..-.....                            .-...+|..+
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~----------------------------~idR~~E~~~  126 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK----------------------------FYDSKVELDV  126 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C----------------------------CCCHHHHHHH
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch----------------------------hcCHHHHHHH
Confidence            456777888899999864211      577888886432111                            0011357777


Q ss_pred             Hhhcc-CCCccceeEEEecCCcceeeeeccccCCCCCCC-HHHHHHHHHHHHHHHHHHhhcC
Q 046907          127 VGQIR-HRNLHPLLAHVTRPDCHLLYILNDVSQGRRELD-WLARHRIALGLACGLEYLHMHH  186 (345)
Q Consensus       127 l~~l~-hpniv~l~~~~~~~~~~~l~~~~~~~~~~~~l~-~~~~~~i~~~i~~~l~~lh~~~  186 (345)
                      ++.+. +.-..++++.+  ++    +.+++|++|..+-. ......++.++++.|.-||+..
T Consensus       127 l~~L~~~gi~P~l~~~~--~~----~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~  182 (424)
T 3mes_A          127 FRYLSNINIAPNIIADF--PE----GRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIIN  182 (424)
T ss_dssp             HHHHHHTTSSCCEEEEE--TT----EEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHhcCCCCCEEEEc--CC----CEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCc
Confidence            77763 33345666532  22    56789998854322 1122357788999999999875


No 291
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=38.35  E-value=28  Score=20.34  Aligned_cols=6  Identities=33%  Similarity=-0.058  Sum_probs=2.2

Q ss_pred             HHHhcC
Q 046907           19 VRRVGR   24 (345)
Q Consensus        19 ~~~~~~   24 (345)
                      ++|+++
T Consensus        36 RRr~~~   41 (44)
T 2ks1_B           36 RRRHIV   41 (44)
T ss_dssp             HTTTCC
T ss_pred             hhhHhh
Confidence            333333


No 292
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=32.15  E-value=32  Score=21.97  Aligned_cols=29  Identities=21%  Similarity=0.144  Sum_probs=18.5

Q ss_pred             hhHHHHHHHHHHHHHHHhcCCCCCCcccc
Q 046907            5 SFFLFFYPKLFLAAVRRVGRDPGPAIFSP   33 (345)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   33 (345)
                      +.+++|+.+++++.++..+++..++.|+.
T Consensus        18 ~~lll~~glcI~ccvkcrhRrrqAeRMSQ   46 (70)
T 2klu_A           18 AGLLLFIGLGIFFSVRSRHRRRQAERMSQ   46 (70)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCSSSCTTSSH
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            45667777788866655555555665554


No 293
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=23.22  E-value=19  Score=20.03  Aligned_cols=12  Identities=0%  Similarity=0.097  Sum_probs=5.2

Q ss_pred             HHHHHHHHhcCC
Q 046907           14 LFLAAVRRVGRD   25 (345)
Q Consensus        14 ~~~~~~~~~~~~   25 (345)
                      +++.+-.+|++.
T Consensus        18 Fl~iRPQ~Kr~K   29 (37)
T 2rdd_B           18 FMILRPQQKRTK   29 (37)
T ss_dssp             HHTHHHHHHHHH
T ss_pred             HHHhhhHHHHHH
Confidence            344444444433


No 294
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=22.18  E-value=86  Score=30.45  Aligned_cols=34  Identities=26%  Similarity=0.318  Sum_probs=28.2

Q ss_pred             HHHHHHhhcCCCCeEecCCCCCCeeecCCCCeEEeccccce
Q 046907          177 CGLEYLHMHHCPRIIHRDLNPVNVLLDDDIEARISGFGFAR  217 (345)
Q Consensus       177 ~~l~~lh~~~~~~iiH~dlk~~nil~~~~~~~kl~Dfg~a~  217 (345)
                      +-+.|+-.-|       |=.++|||++.+|.+.-+|||...
T Consensus       542 Svv~YILGlG-------DRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          542 CVITYLLGVG-------DRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             HHHHHHHTCC-------CCCTTTEEECTTSCEEECCCCSCT
T ss_pred             HHHHHHccCC-------CCCCcceEEeCCCCEEEEeehhhh
Confidence            3556666666       888999999999999999999874


Done!