Query 046909
Match_columns 150
No_of_seqs 239 out of 1049
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 09:39:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046909.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046909hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gla_A Low molecular weight he 100.0 2.5E-29 8.6E-34 170.2 12.9 96 19-119 2-99 (100)
2 1gme_A Heat shock protein 16.9 100.0 1.4E-29 4.7E-34 183.6 8.7 107 20-131 42-150 (151)
3 4eld_A MJ16.5-P1, small heat s 100.0 6.3E-29 2.1E-33 181.7 11.4 100 24-131 59-161 (161)
4 3aab_A Putative uncharacterize 100.0 9.9E-29 3.4E-33 173.2 6.4 105 8-120 11-118 (123)
5 4fei_A Heat shock protein-rela 99.9 7.5E-28 2.6E-32 163.7 9.9 93 18-120 3-97 (102)
6 3l1e_A Alpha-crystallin A chai 99.9 1.4E-25 4.7E-30 153.6 11.8 96 24-131 5-105 (106)
7 2wj5_A Heat shock protein beta 99.9 1.8E-25 6.3E-30 151.7 11.3 94 23-131 3-99 (101)
8 2klr_A Alpha-crystallin B chai 99.9 2.3E-25 7.9E-30 164.8 11.1 96 24-133 66-164 (175)
9 3q9p_A Heat shock protein beta 99.9 3.6E-24 1.2E-28 141.0 11.7 80 26-117 4-84 (85)
10 2y1y_A Alpha-crystallin B chai 99.9 7.3E-24 2.5E-28 140.9 11.2 83 26-120 3-86 (90)
11 2bol_A TSP36, small heat shock 99.9 2E-22 6.9E-27 160.9 9.2 88 20-120 97-191 (314)
12 2bol_A TSP36, small heat shock 99.9 3.3E-22 1.1E-26 159.7 9.6 84 26-118 230-314 (314)
13 1rl1_A Suppressor of G2 allele 99.1 3E-10 1E-14 77.7 7.4 83 18-120 6-90 (114)
14 2xcm_C SGT1-like protein, cyto 99.0 4.8E-10 1.6E-14 73.6 5.8 78 22-119 3-82 (92)
15 3igf_A ALL4481 protein; two-do 98.2 4.6E-06 1.6E-10 67.8 7.8 63 30-117 306-369 (374)
16 2k8q_A Protein SHQ1; beta-sand 98.0 6.9E-06 2.4E-10 57.6 5.4 75 21-120 3-84 (134)
17 3eud_A Protein SHQ1; CS domain 97.9 0.0001 3.4E-09 50.2 9.6 77 19-120 15-98 (115)
18 1x5m_A Calcyclin-binding prote 97.8 0.00026 9.1E-09 48.8 9.6 77 23-119 22-104 (127)
19 1wh0_A Ubiquitin carboxyl-term 97.7 0.00015 5.2E-09 50.8 7.7 86 22-120 20-113 (134)
20 1wgv_A KIAA1068 protein; CS do 97.5 0.00076 2.6E-08 46.3 8.9 79 21-119 19-102 (124)
21 1ejf_A Progesterone receptor P 97.4 0.00075 2.6E-08 46.4 8.0 76 23-119 5-82 (125)
22 3qor_A Nuclear migration prote 97.4 0.00074 2.5E-08 46.2 7.6 75 22-119 17-97 (121)
23 2o30_A Nuclear movement protei 97.3 0.0012 3.9E-08 45.8 7.7 73 22-118 5-80 (131)
24 1wfi_A Nuclear distribution ge 97.3 0.00057 2E-08 47.4 6.1 76 21-119 7-88 (131)
25 2rh0_A NUDC domain-containing 97.1 0.0022 7.5E-08 45.9 8.0 74 22-119 14-91 (157)
26 2cg9_X CO-chaperone protein SB 97.1 0.00044 1.5E-08 48.3 3.7 74 29-118 23-97 (134)
27 2kmw_A Uncharacterized protein 96.9 0.0016 5.6E-08 46.3 5.3 76 21-119 4-82 (150)
28 3q9p_A Heat shock protein beta 86.8 1.7 5.8E-05 27.2 5.4 34 85-119 8-41 (85)
29 2y1y_A Alpha-crystallin B chai 82.1 2.5 8.7E-05 26.6 4.7 33 85-118 7-39 (90)
30 3gla_A Low molecular weight he 81.9 3.5 0.00012 26.2 5.5 36 84-120 14-49 (100)
31 3l1e_A Alpha-crystallin A chai 81.1 3.3 0.00011 27.0 5.1 32 85-117 13-44 (106)
32 2wj5_A Heat shock protein beta 79.6 3.3 0.00011 26.7 4.7 33 85-118 12-44 (101)
33 4fei_A Heat shock protein-rela 78.4 4.2 0.00014 26.1 4.9 33 84-117 16-48 (102)
34 4eld_A MJ16.5-P1, small heat s 77.1 12 0.00041 26.0 7.4 34 85-119 67-100 (161)
35 3aab_A Putative uncharacterize 76.0 6.9 0.00023 25.9 5.6 34 85-119 35-69 (123)
36 2klr_A Alpha-crystallin B chai 66.0 8.6 0.00029 27.4 4.5 33 85-118 74-106 (175)
37 1gme_A Heat shock protein 16.9 64.3 24 0.00081 24.2 6.5 34 85-119 54-88 (151)
38 2nwt_A UPF0165 protein AF_2212 62.6 5.8 0.0002 24.2 2.6 15 99-113 3-17 (69)
39 2cql_A OK/SW-CL.103, 60S ribos 62.4 9.7 0.00033 24.7 3.9 19 42-61 20-38 (100)
40 1nkw_E 50S ribosomal protein L 58.2 23 0.00079 26.2 5.7 46 42-117 39-84 (212)
41 1rl6_A Protein (ribosomal prot 56.3 19 0.00065 25.8 4.9 46 42-117 11-56 (177)
42 1vq8_E 50S ribosomal protein L 52.1 21 0.00073 25.6 4.5 47 42-117 9-55 (178)
43 3j21_F 50S ribosomal protein L 51.5 17 0.00059 26.2 4.0 45 42-115 14-58 (184)
44 1ew4_A CYAY protein; friedreic 50.9 16 0.00055 23.9 3.4 34 100-133 29-65 (106)
45 3v2d_H 50S ribosomal protein L 40.5 40 0.0014 24.1 4.5 44 42-115 12-55 (180)
46 3iz5_F 60S ribosomal protein L 40.0 29 0.00098 25.1 3.7 19 42-61 13-31 (190)
47 3oeq_A Frataxin homolog, mitoc 39.8 24 0.00081 23.8 3.0 16 101-116 49-64 (123)
48 2o30_A Nuclear movement protei 38.9 69 0.0024 21.2 5.3 31 84-114 14-44 (131)
49 2hyk_A Beta-1,3-glucanase; fam 38.7 39 0.0013 24.8 4.4 48 42-95 49-99 (245)
50 3u5e_H L8, RP24, YL11, 60S rib 38.4 52 0.0018 23.8 4.9 46 42-116 13-59 (191)
51 2uwa_A Cellulase; glycoside hy 34.4 67 0.0023 24.3 5.2 43 41-95 31-74 (274)
52 3t3l_A Frataxin, mitochondrial 32.2 30 0.001 23.5 2.5 35 99-133 40-78 (129)
53 2zkr_e 60S ribosomal protein L 31.2 47 0.0016 24.0 3.6 47 42-117 13-62 (192)
54 2ks0_A Uncharacterized protein 30.8 28 0.00097 21.1 2.0 24 39-63 17-40 (71)
55 2gjh_A Designed protein; oblig 30.6 41 0.0014 19.0 2.5 22 41-63 31-52 (62)
56 4awd_A Beta-porphyranase; hydr 29.7 1.1E+02 0.0039 23.7 5.9 48 41-95 85-145 (324)
57 3bbo_I Ribosomal protein L6; l 29.1 18 0.00061 27.0 1.0 47 42-117 54-100 (223)
58 2kgs_A Uncharacterized protein 29.1 34 0.0012 22.9 2.4 26 37-63 2-27 (132)
59 1wgv_A KIAA1068 protein; CS do 28.9 1.2E+02 0.0042 19.7 5.3 32 84-115 29-61 (124)
60 1nvp_C Transcription initiatio 26.5 31 0.0011 21.3 1.6 15 98-112 46-60 (76)
61 3o5s_A Beta-glucanase; glycosy 25.5 1.2E+02 0.0041 22.3 5.1 44 47-94 63-107 (238)
62 3qqz_A Putative uncharacterize 25.0 2.1E+02 0.0072 21.1 8.8 70 31-113 13-86 (255)
63 2rh0_A NUDC domain-containing 24.2 1.8E+02 0.006 19.9 6.3 32 84-115 23-54 (157)
64 1q5l_A Chaperone protein DNAK; 24.1 1.5E+02 0.005 19.7 5.0 32 99-133 98-132 (135)
65 3r8s_G 50S ribosomal protein L 23.7 32 0.0011 24.6 1.5 42 42-113 11-52 (176)
66 3iln_A Laminarinase; jelly ROW 23.1 1.5E+02 0.0052 21.7 5.3 46 47-95 49-97 (251)
67 1wfi_A Nuclear distribution ge 22.7 1.1E+02 0.0039 20.0 4.1 31 85-115 18-50 (131)
68 1nh2_C Transcription initiatio 21.0 46 0.0016 20.7 1.6 15 98-112 48-62 (79)
69 1o4z_A Beta-agarase B; glycosi 20.5 1.6E+02 0.0054 23.0 5.1 49 41-95 103-153 (346)
70 3qor_A Nuclear migration prote 20.3 1.8E+02 0.0063 18.8 5.7 32 84-115 26-59 (121)
71 2ayh_A 1,3-1,4-beta-D-glucan 4 20.3 1.8E+02 0.0061 20.6 5.1 43 48-94 40-83 (214)
No 1
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.96 E-value=2.5e-29 Score=170.16 Aligned_cols=96 Identities=31% Similarity=0.561 Sum_probs=89.5
Q ss_pred CCCCccc--CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCC
Q 046909 19 PFRSRLD--GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSA 96 (150)
Q Consensus 19 ~~~p~~d--e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~v 96 (150)
.|.|++| |+++.|+|.++|||++++||+|++.+ +.|+|+|++.. +...+..+|+++||.+|+|.|+|.||.+|
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~----~~~~~~~~~~~~er~~g~f~r~~~LP~~v 76 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKS----ESSTETERFSRIERRYGSFHRRFALPDSA 76 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECC----GGGSSGGGEEEECCCCEEEEEEEECCTTB
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcC----cCccCCccEEEEeecceEEEEEEECCCCc
Confidence 5899999 99999999999999999999999999 99999999988 55667788999999999999999999999
Q ss_pred cccceEEEEeCCEEEEEEeccCc
Q 046909 97 DLEHVKVHLENGVLRITVPKLTE 119 (150)
Q Consensus 97 d~~~i~A~~~~GvL~I~lPK~~~ 119 (150)
|.++|+|+|+||+|+|++||.+.
T Consensus 77 d~~~i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 77 DADGITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CTTSCEEEEETTEEEEEEEBC--
T ss_pred ChHHeEEEEeCCEEEEEEecCCC
Confidence 99999999999999999999864
No 2
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.96 E-value=1.4e-29 Score=183.55 Aligned_cols=107 Identities=46% Similarity=0.680 Sum_probs=95.0
Q ss_pred CCCccc--CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCc
Q 046909 20 FRSRLD--GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSAD 97 (150)
Q Consensus 20 ~~p~~d--e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd 97 (150)
|.|++| |++++|+|.++|||++++||+|++.+++.|+|+|+++. +...++.+|+++||.+|.|.|+|.||.+||
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~----~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd 117 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTK----EKEDKNDKWHRVERSSGKFVRRFRLLEDAK 117 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCC----CCCCTTCEEEECCCCCCCEEEEEECSSCCC
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEcc----ccccCCceEEEEeEeccEEEEEEECCCCcc
Confidence 568999 99999999999999999999999954389999999887 445567899999999999999999999999
Q ss_pred ccceEEEEeCCEEEEEEeccCcccCCCCeEEEee
Q 046909 98 LEHVKVHLENGVLRITVPKLTEEKRRQPKVISIN 131 (150)
Q Consensus 98 ~~~i~A~~~~GvL~I~lPK~~~~~~~~~~~I~I~ 131 (150)
.++|+|+|+||+|+|++||.... ....++|+|+
T Consensus 118 ~~~i~A~~~nGvL~I~lPK~~~~-~~~~~~I~I~ 150 (151)
T 1gme_A 118 VEEVKAGLENGVLTVTVPKAEVK-KPEVKAIQIS 150 (151)
T ss_dssp GGGCEEEEETTEEEEEEECCCCC-TTCCCCCCCC
T ss_pred ccceEEEEECCEEEEEEEccCcC-CCCCeEeeeC
Confidence 99999999999999999998875 2345777765
No 3
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.96 E-value=6.3e-29 Score=181.67 Aligned_cols=100 Identities=21% Similarity=0.305 Sum_probs=92.3
Q ss_pred cc--CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeee-eeeEEEEEEECCCCCcccc
Q 046909 24 LD--GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAES-TFGKFWRQFKMPMSADLEH 100 (150)
Q Consensus 24 ~d--e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~-~~g~f~r~~~LP~~vd~~~ 100 (150)
+| |++++|+|.++|||++++||+|++.+ +.|+|+|+++. ....++.+|+++|| .+|.|.|+|.||.+||.++
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~----~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~ 133 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSP----LMITESERIIYSEIPEEEEIYRTIKLPATVKEEN 133 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCC----CCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGG
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcc----cccCCCceEEEEEeeccccEEEEEECCCCccccc
Confidence 89 99999999999999999999999999 89999999887 44456778999999 9999999999999999999
Q ss_pred eEEEEeCCEEEEEEeccCcccCCCCeEEEee
Q 046909 101 VKVHLENGVLRITVPKLTEEKRRQPKVISIN 131 (150)
Q Consensus 101 i~A~~~~GvL~I~lPK~~~~~~~~~~~I~I~ 131 (150)
|+|+|+||||+|++||.+.. ++++|+|+
T Consensus 134 i~A~~~nGvL~I~lpK~~~~---~~r~I~Ie 161 (161)
T 4eld_A 134 ASAKFENGVLSVILPKAESS---IKKGINIE 161 (161)
T ss_dssp CEEEEETTEEEEEEEBCGGG---SCCCCCCC
T ss_pred EEEEEECCEEEEEEEcCCCC---CCcEeecC
Confidence 99999999999999998776 57888875
No 4
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.95 E-value=9.9e-29 Score=173.25 Aligned_cols=105 Identities=18% Similarity=0.197 Sum_probs=90.0
Q ss_pred hHHHHhhccCCCCCCccc--CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeE
Q 046909 8 FFDVMFAMTEDPFRSRLD--GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGK 85 (150)
Q Consensus 8 ~~d~~~~~~~~~~~p~~d--e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~ 85 (150)
+|+++++.|...+.|++| |++++|+|.++|||++++||+|++.+++.|+|+|++.. +. +.+|+++||.+ +
T Consensus 11 ~~~~~~~~~~~~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~----~~---~~~~~~~Er~~-~ 82 (123)
T 3aab_A 11 RSEELSRGFYELVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREI----TE---PGVKYLTQRPK-Y 82 (123)
T ss_dssp ---CCCHHHHHHHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCC----CC---CSCEEEECSCS-E
T ss_pred HHHHHhhhccccCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEec----cC---CCeEEEEEEeE-E
Confidence 344444444445679999 99999999999999999999999988579999999877 22 67899999999 9
Q ss_pred EEEEEECCCCCcccce-EEEEeCCEEEEEEeccCcc
Q 046909 86 FWRQFKMPMSADLEHV-KVHLENGVLRITVPKLTEE 120 (150)
Q Consensus 86 f~r~~~LP~~vd~~~i-~A~~~~GvL~I~lPK~~~~ 120 (150)
|.|+|.||.+||.++| +|+|+||+|+|++||....
T Consensus 83 f~R~~~LP~~vd~~~i~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 83 VRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp EEEEEECSSEECTTCCCEEEEETTEEEEEEEGGGEE
T ss_pred EEEEEECCCCcCcchhCeeEEcCCEEEEEEEcCCCC
Confidence 9999999999999999 9999999999999998764
No 5
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.95 E-value=7.5e-28 Score=163.70 Aligned_cols=93 Identities=27% Similarity=0.381 Sum_probs=86.6
Q ss_pred CCCCCccc--CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCC
Q 046909 18 DPFRSRLD--GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMS 95 (150)
Q Consensus 18 ~~~~p~~d--e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~ 95 (150)
..|.|++| |+++.|+|.++|||++++||+|++.+ +.|+|+|+++. ..+|+++||.+|.|.|+|.||.+
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~---------~~~~~~~er~~g~f~R~~~LP~~ 72 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPG---------TEHLLRSERPSGRFVRELAFPEP 72 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECC---------CSSCSSCCSEEEEEEEEEECSSC
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEec---------CCCEEEEEEeccEEEEEEECCCC
Confidence 35899999 99999999999999999999999999 99999999854 25788899999999999999999
Q ss_pred CcccceEEEEeCCEEEEEEeccCcc
Q 046909 96 ADLEHVKVHLENGVLRITVPKLTEE 120 (150)
Q Consensus 96 vd~~~i~A~~~~GvL~I~lPK~~~~ 120 (150)
||.++|+|+|+||+|+|++||.++.
T Consensus 73 vd~~~i~A~~~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 73 VRPASGVASLAGGVLTVRFEKLRPT 97 (102)
T ss_dssp BCTTCCEEEEETTEEEEEEEBSSCC
T ss_pred cchhHcEEEEECCEEEEEEEccCcc
Confidence 9999999999999999999998765
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.93 E-value=1.4e-25 Score=153.61 Aligned_cols=96 Identities=18% Similarity=0.402 Sum_probs=83.0
Q ss_pred cc--CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccce
Q 046909 24 LD--GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHV 101 (150)
Q Consensus 24 ~d--e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i 101 (150)
.| |+++.|+|.++||||+++||+|++.+ +.|+|+|++.. . ..+..|+++ .|.|+|.||.+||.++|
T Consensus 5 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~--~~~~~~~~~-----eF~R~~~LP~~vd~~~i 72 (106)
T 3l1e_A 5 SEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNE----R--QDDHGYISR-----EFHRRYRLPSNVDQSAL 72 (106)
T ss_dssp EEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----E--ETTTEEEEE-----EEEEEEECCTTBCTTSC
T ss_pred eEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----c--cCCCCEEEE-----EEEEEEECCCCcChhHc
Confidence 56 89999999999999999999999999 99999999765 2 234456654 49999999999999999
Q ss_pred EEEE-eCCEEEEEEeccCccc--CCCCeEEEee
Q 046909 102 KVHL-ENGVLRITVPKLTEEK--RRQPKVISIN 131 (150)
Q Consensus 102 ~A~~-~~GvL~I~lPK~~~~~--~~~~~~I~I~ 131 (150)
+|+| +||+|+|++||.++.. ...+|+|+|+
T Consensus 73 ~A~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 73 SCSLSADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EEEECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred EEEECCCCEEEEEEEccCcccccCCCCeEeeec
Confidence 9999 8999999999998762 2478899886
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.93 E-value=1.8e-25 Score=151.70 Aligned_cols=94 Identities=18% Similarity=0.263 Sum_probs=79.7
Q ss_pred ccc--CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccc
Q 046909 23 RLD--GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEH 100 (150)
Q Consensus 23 ~~d--e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~ 100 (150)
.+| |+++.|+|.++||||+++||+|++.+ +.|+|+|++.. .. ++..|+++| |.|+|.||.+||.++
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~----~~--~~~~~~~~e-----F~R~~~LP~~vd~~~ 70 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEE----RP--DEHGFIARE-----FHRRYRLPPGVDPAA 70 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----CS--STTCCEEEE-----EEEEEECCTTBCTTC
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEec----cc--CCCCEEEEE-----EEEEEECCCCcChhH
Confidence 467 99999999999999999999999999 89999999876 22 345666655 999999999999999
Q ss_pred eEEEE-eCCEEEEEEeccCcccCCCCeEEEee
Q 046909 101 VKVHL-ENGVLRITVPKLTEEKRRQPKVISIN 131 (150)
Q Consensus 101 i~A~~-~~GvL~I~lPK~~~~~~~~~~~I~I~ 131 (150)
|+|+| +||+|+|++||.... .++.++|.
T Consensus 71 i~A~~s~nGvL~I~lPK~~~~---~~~~~~i~ 99 (101)
T 2wj5_A 71 VTSALSPEGVLSIQATPASAQ---ASLPSPPA 99 (101)
T ss_dssp CEEEECTTSEEEEEECBCCCC---CSSCC---
T ss_pred CEEEECCCCEEEEEEECCCcC---CCCCCccc
Confidence 99999 899999999998876 45555553
No 8
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.93 E-value=2.3e-25 Score=164.79 Aligned_cols=96 Identities=22% Similarity=0.369 Sum_probs=72.7
Q ss_pred cc--CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccce
Q 046909 24 LD--GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHV 101 (150)
Q Consensus 24 ~d--e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i 101 (150)
+| |+++.|+|.++||||+++||+|++.+ +.|+|+|++.. . .++.+|+++| |.|+|.||.+||.++|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~----~--~~~~~~~~re-----F~R~~~LP~~Vd~~~i 133 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEE----R--QDEHGFISRE-----FHRKYRIPADVDPLTI 133 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEE----E--EETTEEEEEE-----EEEEEECTTTCCTTTC
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----c--ccCCceEEEE-----EEEEEECCCCcChhHe
Confidence 46 99999999999999999999999999 89999999876 2 2345677654 9999999999999999
Q ss_pred EEEE-eCCEEEEEEeccCcccCCCCeEEEeeec
Q 046909 102 KVHL-ENGVLRITVPKLTEEKRRQPKVISINDE 133 (150)
Q Consensus 102 ~A~~-~~GvL~I~lPK~~~~~~~~~~~I~I~~~ 133 (150)
+|+| +||||+|++||.+.. ...++|+|+.+
T Consensus 134 ~A~~s~dGvL~I~lPK~~~~--~~~r~I~I~~~ 164 (175)
T 2klr_A 134 TSSLSSDGVLTVNGPRKQVS--GPERTIPITRE 164 (175)
T ss_dssp EEEECTTSCEEEEEECC----------------
T ss_pred EEEEcCCCEEEEEEECCCCC--CCCeEEEEecC
Confidence 9999 799999999998764 24699999877
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.91 E-value=3.6e-24 Score=141.04 Aligned_cols=80 Identities=19% Similarity=0.353 Sum_probs=69.0
Q ss_pred CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEEE
Q 046909 26 GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVHL 105 (150)
Q Consensus 26 e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~ 105 (150)
|++++|+|.++||||+++||+|++.+ +.|+|+|++.. ... ... ..+++|.|+|.||.+||.++|+|+|
T Consensus 4 E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~~~--~~~-----~~~~~F~R~~~LP~~vd~~~i~A~~ 71 (85)
T 3q9p_A 4 HTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAA----RQD--EHG-----YISRCFTRKYTLPPGVDPTQVSSSL 71 (85)
T ss_dssp CCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC------------------CCCEEEEEEEECCTTCCGGGCEEEE
T ss_pred CcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----ccC--CCC-----EEEEEEEEEEECCCCcChHHcEEEE
Confidence 78999999999999999999999999 89999999876 221 122 2367899999999999999999999
Q ss_pred e-CCEEEEEEecc
Q 046909 106 E-NGVLRITVPKL 117 (150)
Q Consensus 106 ~-~GvL~I~lPK~ 117 (150)
. ||+|+|++||.
T Consensus 72 ~~~GvL~I~lPK~ 84 (85)
T 3q9p_A 72 SPEGTLTVEAPMP 84 (85)
T ss_dssp CTTSEEEEEEECC
T ss_pred CCCCEEEEEEEcC
Confidence 8 99999999995
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.91 E-value=7.3e-24 Score=140.93 Aligned_cols=83 Identities=20% Similarity=0.370 Sum_probs=70.0
Q ss_pred CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEEE
Q 046909 26 GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVHL 105 (150)
Q Consensus 26 e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~ 105 (150)
++++.|+|.++||||+++||+|++.+ +.|+|+|++.. . .++..|+++| |.|+|.||.+||.++|+|+|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~--~~~~~~~~~e-----f~R~~~LP~~vd~~~i~A~~ 70 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEE----R--QDEHGFISRE-----FHRKYRIPADVDPLTITSSM 70 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----E--ECSSSEEEEE-----EEEEEECCTTBCGGGCEEEE
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEec----c--cCCCCEEEEE-----EEEEEECCCCcChhHcEEEE
Confidence 57899999999999999999999999 89999999876 2 2455677554 99999999999999999999
Q ss_pred -eCCEEEEEEeccCcc
Q 046909 106 -ENGVLRITVPKLTEE 120 (150)
Q Consensus 106 -~~GvL~I~lPK~~~~ 120 (150)
+||+|+|++||....
T Consensus 71 ~~~GvL~I~~pK~~~~ 86 (90)
T 2y1y_A 71 SSDGVLTVNGPRKQVS 86 (90)
T ss_dssp CTTSEEEEEECBC---
T ss_pred CCCCEEEEEEEcCCCC
Confidence 899999999998765
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.87 E-value=2e-22 Score=160.93 Aligned_cols=88 Identities=18% Similarity=0.269 Sum_probs=78.4
Q ss_pred CCCccc--CCCC----eEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECC
Q 046909 20 FRSRLD--GAPI----AHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMP 93 (150)
Q Consensus 20 ~~p~~d--e~~~----~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP 93 (150)
|.|++| |+++ +|+|.++||||+++||+|.+.+ +.|+|+|++.. +.. + .+.+|.|.|+|.||
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~----~~e--~------~r~~g~F~R~~~LP 163 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSV----ACG--D------AAMSESVGRSIPLP 163 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCBS----STT--C------CCBCCCEEEEEECC
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEec----cCC--C------CEEEEEEEEEEECC
Confidence 568999 7777 9999999999999999999999 99999999876 221 1 16789999999999
Q ss_pred CCCcccceEEEEe-CCEEEEEEeccCcc
Q 046909 94 MSADLEHVKVHLE-NGVLRITVPKLTEE 120 (150)
Q Consensus 94 ~~vd~~~i~A~~~-~GvL~I~lPK~~~~ 120 (150)
.+||.++|+|+|+ ||||+|++||.++.
T Consensus 164 ~~Vd~e~i~A~~~~nGVL~I~lPK~~~~ 191 (314)
T 2bol_A 164 PSVDRNHIQATITTDDVLVIEAPVNEPN 191 (314)
T ss_dssp TTBCGGGCEEEECSSSEEEEEEEBSSCC
T ss_pred CCccccccEEEEeCCCEEEEEEeccCcc
Confidence 9999999999999 99999999998764
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.87 E-value=3.3e-22 Score=159.68 Aligned_cols=84 Identities=15% Similarity=0.306 Sum_probs=69.1
Q ss_pred CCCCeEEEEEEc-CCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEE
Q 046909 26 GAPIAHVIALDI-LGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVH 104 (150)
Q Consensus 26 e~~~~~~i~~~l-PG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~ 104 (150)
++++.|+|.++| ||++++||+|++.+ +.|+|+|+++. +. ..++++||.+|+|.|+|.||.+||.++|+|+
T Consensus 230 ~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~----~~----~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~ 300 (314)
T 2bol_A 230 DGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGK----EE----KTENASHSEHREFYKAFVTPEVVDASKTQAE 300 (314)
T ss_dssp TSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC--------------------CEEEEEEEECSSEECGGGCEEE
T ss_pred CCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEec----cC----CceEEEEEeeeEEEEEEECCCCcChHHeEEE
Confidence 588899999999 99999999999999 89999999887 22 2578899999999999999999999999999
Q ss_pred EeCCEEEEEEeccC
Q 046909 105 LENGVLRITVPKLT 118 (150)
Q Consensus 105 ~~~GvL~I~lPK~~ 118 (150)
|+||||+|++||..
T Consensus 301 ~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 301 IVDGLMVVEAPLFK 314 (314)
T ss_dssp EETTEEEEEEEEEC
T ss_pred EeCCEEEEEEecCC
Confidence 99999999999963
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.09 E-value=3e-10 Score=77.68 Aligned_cols=83 Identities=18% Similarity=0.187 Sum_probs=70.3
Q ss_pred CCCCCccc--CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCC
Q 046909 18 DPFRSRLD--GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMS 95 (150)
Q Consensus 18 ~~~~p~~d--e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~ 95 (150)
....|++| ++.+.+.|++.+||+.+++++|.+.+ +.|.|++.... + ..|...+.|+..
T Consensus 6 ~~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~~---------~----------~~y~~~~~L~~~ 65 (114)
T 1rl1_A 6 HQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLPS---------G----------EDYNLKLELLHP 65 (114)
T ss_dssp --CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECTT---------S----------SEEEEEECBSSC
T ss_pred CCCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeCC---------C----------cEEEEEeeCCCc
Confidence 33456777 99999999999999999999999999 89999976321 1 247788999999
Q ss_pred CcccceEEEEeCCEEEEEEeccCcc
Q 046909 96 ADLEHVKVHLENGVLRITVPKLTEE 120 (150)
Q Consensus 96 vd~~~i~A~~~~GvL~I~lPK~~~~ 120 (150)
|+++..++++.+|.|.|+|+|....
T Consensus 66 I~~e~s~~~~~~~~l~i~L~K~~~~ 90 (114)
T 1rl1_A 66 IIPEQSTFKVLSTKIEIKLKKPEAV 90 (114)
T ss_dssp CCGGGEEEEECSSSEEEEEECSSCC
T ss_pred CCccccEEEEECCEEEEEEEcCCCC
Confidence 9999999999999999999998753
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.01 E-value=4.8e-10 Score=73.62 Aligned_cols=78 Identities=19% Similarity=0.200 Sum_probs=67.6
Q ss_pred Cccc--CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCccc
Q 046909 22 SRLD--GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLE 99 (150)
Q Consensus 22 p~~d--e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~ 99 (150)
|+++ ++.+.+.|++.+||+.++++.|.+.+ +.|.|++.... + ..|...+.|+..|+++
T Consensus 3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~~---------~----------~~y~~~~~L~~~I~~~ 62 (92)
T 2xcm_C 3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVPG---------E----------DAYYLQPRLFGKIIPD 62 (92)
T ss_dssp SEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCTT---------S----------CCEEECCBBSSCBCGG
T ss_pred ccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcCC---------C----------cEEEEeeEcCCccCch
Confidence 5667 88999999999999999999999999 89999875321 1 2377888999999999
Q ss_pred ceEEEEeCCEEEEEEeccCc
Q 046909 100 HVKVHLENGVLRITVPKLTE 119 (150)
Q Consensus 100 ~i~A~~~~GvL~I~lPK~~~ 119 (150)
..++++.+|.|.|+|+|..+
T Consensus 63 ~s~~~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 63 KCKYEVLSTKIEICLAKADI 82 (92)
T ss_dssp GCEEEECSSCEEEEEEBSSS
T ss_pred hEEEEEECCEEEEEEEcCCC
Confidence 99999999999999999864
No 15
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.18 E-value=4.6e-06 Score=67.82 Aligned_cols=63 Identities=19% Similarity=0.219 Sum_probs=55.3
Q ss_pred eEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccc-eEEEEeCC
Q 046909 30 AHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEH-VKVHLENG 108 (150)
Q Consensus 30 ~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~-i~A~~~~G 108 (150)
.|.+++.|||+++++|++.-.+ ..|+|++ |.|+|.|.||.....-. ..|+|+||
T Consensus 306 ~~~~~l~lP~~~~~~~~l~~~g-deL~v~~------------------------g~~rR~i~LP~~L~~~~v~~A~~~~~ 360 (374)
T 3igf_A 306 NRQVRLFLPGFDKKQVKLTQYG-PEVTVEA------------------------GDQRRNIFLPPALSGRPITGAKFQNN 360 (374)
T ss_dssp TTEEEEECTTCCGGGCEEEEET-TEEEEEE------------------------TTEEEEEECCTTTTTCCEEEEEEETT
T ss_pred cEEEEEECCCCCHHHeEEEEEC-CeEEEEE------------------------CCEeecccCCHHHcCCCccccEEECC
Confidence 7999999999999999999999 8999983 56999999998875554 46999999
Q ss_pred EEEEEEecc
Q 046909 109 VLRITVPKL 117 (150)
Q Consensus 109 vL~I~lPK~ 117 (150)
.|+|++-..
T Consensus 361 ~L~i~~~~~ 369 (374)
T 3igf_A 361 YLIISFLEH 369 (374)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEehh
Confidence 999998654
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.04 E-value=6.9e-06 Score=57.56 Aligned_cols=75 Identities=13% Similarity=0.266 Sum_probs=63.5
Q ss_pred CCccc--CCCCeEEEEEEcCCCC--CCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCC
Q 046909 21 RSRLD--GAPIAHVIALDILGMK--KDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSA 96 (150)
Q Consensus 21 ~p~~d--e~~~~~~i~~~lPG~~--~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~v 96 (150)
.|.+. .+++.++|.+.+|.++ ..++++.+.+ ..+..... .|.-++.||..|
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~~~------------------------PYyLRL~LP~~V 57 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS------------------------PYYLRLRFPHEL 57 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEECSS------------------------SSCEEECCSSCE
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEecC------------------------CeEEEecCCCee
Confidence 35555 7889999999999999 8999999999 78777632 256679999998
Q ss_pred -cccceEEEEe--CCEEEEEEeccCcc
Q 046909 97 -DLEHVKVHLE--NGVLRITVPKLTEE 120 (150)
Q Consensus 97 -d~~~i~A~~~--~GvL~I~lPK~~~~ 120 (150)
+.+..+|+|. .|.|+|+|||..+.
T Consensus 58 ~e~~~~kA~YD~d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 58 IDDERSTAQYDSKDECINVKVAKLNKN 84 (134)
T ss_dssp ECCSSCEEEEETTTTEEEEEEEESSTT
T ss_pred ecCCCcceeEeccCCEEEEEEeCCCCC
Confidence 9999999995 89999999998765
No 17
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.94 E-value=0.0001 Score=50.19 Aligned_cols=77 Identities=13% Similarity=0.253 Sum_probs=64.1
Q ss_pred CCCCccc--CCCCeEEEEEEcCCCC--CCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCC
Q 046909 19 PFRSRLD--GAPIAHVIALDILGMK--KDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPM 94 (150)
Q Consensus 19 ~~~p~~d--e~~~~~~i~~~lPG~~--~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~ 94 (150)
...|... .+++.++|.+-+|-+. ..++++.+.+ +.+....+ .|.-++.||.
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~~~------------------------PYyLRL~lP~ 69 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS------------------------PYYLRLRFPH 69 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEEET------------------------TEEEEEECSS
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEecC------------------------CeEEEEecCc
Confidence 3456666 7888999999999876 7899999999 88877742 3677899999
Q ss_pred CC-cccceEEEEe--CCEEEEEEeccCcc
Q 046909 95 SA-DLEHVKVHLE--NGVLRITVPKLTEE 120 (150)
Q Consensus 95 ~v-d~~~i~A~~~--~GvL~I~lPK~~~~ 120 (150)
.+ +.+.-+|+|+ +|.++|++||..+.
T Consensus 70 ~vved~~~~A~YD~d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 70 ELIDDERSTAQYDSKDECINVKVAKLNKN 98 (115)
T ss_dssp CEECSTTCEEEEETTTTEEEEEEEESSTT
T ss_pred ceecCCCcceEEeCCCcEEEEEEcCCcCC
Confidence 87 7788899995 89999999998765
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.76 E-value=0.00026 Score=48.85 Aligned_cols=77 Identities=12% Similarity=0.152 Sum_probs=63.6
Q ss_pred ccc--CCCCeEEEEEEcCCC---CCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEE-CCCCC
Q 046909 23 RLD--GAPIAHVIALDILGM---KKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFK-MPMSA 96 (150)
Q Consensus 23 ~~d--e~~~~~~i~~~lPG~---~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~-LP~~v 96 (150)
+++ .+.+.+.|.+.+||+ .++++.|.+.. +.|.|++.... +. .|.-.+. |-..|
T Consensus 22 ~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~~---------~~----------~y~~~~~~L~~~I 81 (127)
T 1x5m_A 22 NYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNLN---------GK----------SYSMIVNNLLKPI 81 (127)
T ss_dssp SCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSCS---------SS----------CEEEEEECBSSCC
T ss_pred EEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcCC---------CC----------cEEEEhHHhcCcc
Confidence 455 889999999999999 89999999999 89999863211 11 2556675 99999
Q ss_pred cccceEEEEeCCEEEEEEeccCc
Q 046909 97 DLEHVKVHLENGVLRITVPKLTE 119 (150)
Q Consensus 97 d~~~i~A~~~~GvL~I~lPK~~~ 119 (150)
+++.-+.++..+.|.|+|-|...
T Consensus 82 ~~e~S~~~v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 82 SVEGSSKKVKTDTVLILCRKKVE 104 (127)
T ss_dssp CTTTCEEEEETTEEEEEEECSSS
T ss_pred CcccCEEEEeCCEEEEEEEECCC
Confidence 99998999999999999999864
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.71 E-value=0.00015 Score=50.78 Aligned_cols=86 Identities=14% Similarity=0.152 Sum_probs=66.2
Q ss_pred Cccc--CC-CCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccc-----cccCceEEEeeeeeeEEEEEEECC
Q 046909 22 SRLD--GA-PIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKE-----GVEGEKRHRAESTFGKFWRQFKMP 93 (150)
Q Consensus 22 p~~d--e~-~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~-----~~~~~~~~~~e~~~g~f~r~~~LP 93 (150)
+++| .+ .+.+.|++.++|+.++++.|.+.. +.|.|+..... .. ...+.. -.|.-.+.|-
T Consensus 20 ~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~----~~~l~~~~a~g~~--------~~y~~~~~L~ 86 (134)
T 1wh0_A 20 VKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRD----GNFLRLHPGCGPH--------TTFRWQVKLR 86 (134)
T ss_dssp CCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCC----HHHHHHSTTCCTT--------SCEEEEEEBS
T ss_pred CCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCC----CcccccccccCcc--------eeEEEecccc
Confidence 4566 78 999999999999999999999999 89999865322 00 000000 0366678899
Q ss_pred CCCcccceEEEEeCCEEEEEEeccCcc
Q 046909 94 MSADLEHVKVHLENGVLRITVPKLTEE 120 (150)
Q Consensus 94 ~~vd~~~i~A~~~~GvL~I~lPK~~~~ 120 (150)
..|+++.-+.++..+.|.|+|.|.+..
T Consensus 87 ~~I~pe~S~~~v~~~kIeI~L~K~e~~ 113 (134)
T 1wh0_A 87 NLIEPEQCTFCFTASRIDICLRKRQSQ 113 (134)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEESSSC
T ss_pred ccCCchhCEEEEeCCEEEEEEEECCCC
Confidence 999999989889999999999998653
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.51 E-value=0.00076 Score=46.30 Aligned_cols=79 Identities=18% Similarity=0.228 Sum_probs=62.7
Q ss_pred CCccc--CCCCeEEEEEEcC-CC-CCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCC
Q 046909 21 RSRLD--GAPIAHVIALDIL-GM-KKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSA 96 (150)
Q Consensus 21 ~p~~d--e~~~~~~i~~~lP-G~-~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~v 96 (150)
.|.+. .+.+.+.|++.|| |+ ++++|.|.+.. +.|.|...... +. .+.-...|...|
T Consensus 19 ~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~~---------~~----------~~~~~~~L~~~I 78 (124)
T 1wgv_A 19 RENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEEN---------GE----------RVLMEGKLTHKI 78 (124)
T ss_dssp CSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECSS---------SE----------EEEEEEEBSSCB
T ss_pred CCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEccC---------CC----------ceEEcccccCcC
Confidence 34556 8899999999999 88 89999999999 89999864211 11 123456799999
Q ss_pred cccceEEEEeCCE-EEEEEeccCc
Q 046909 97 DLEHVKVHLENGV-LRITVPKLTE 119 (150)
Q Consensus 97 d~~~i~A~~~~Gv-L~I~lPK~~~ 119 (150)
+++.-...+.+|- |.|+|-|...
T Consensus 79 ~~e~S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 79 NTESSLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp CTTTCEEEECTTSEEEEEECBSSS
T ss_pred CCcCCEEEEeCCCEEEEEEEECCC
Confidence 9999999998885 9999999864
No 21
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.42 E-value=0.00075 Score=46.43 Aligned_cols=76 Identities=13% Similarity=0.038 Sum_probs=62.9
Q ss_pred ccc--CCCCeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccc
Q 046909 23 RLD--GAPIAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEH 100 (150)
Q Consensus 23 ~~d--e~~~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~ 100 (150)
.++ .+.+.+.|++.+|+. +++.|.+.. +.|.+++.... .+ ..|.-.+.|-..|+++.
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~--------~~----------~~y~~~l~L~~~I~~e~ 63 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGS--------DN----------FKHLNEIDLFHCIDPND 63 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEETT--------TT----------EEEEEEEEBSSCEEEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEeCC--------CC----------ceEEEEEEccceecccc
Confidence 577 889999999999996 699999999 89999876422 11 13666788999999999
Q ss_pred eEEEEeCCEEEEEEeccCc
Q 046909 101 VKVHLENGVLRITVPKLTE 119 (150)
Q Consensus 101 i~A~~~~GvL~I~lPK~~~ 119 (150)
.+.++.++.+.|+|.|..+
T Consensus 64 S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 64 SKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp EEEEECSSCEEEEEEESST
T ss_pred CEEEECCCEEEEEEEECCC
Confidence 9999988999999999864
No 22
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.38 E-value=0.00074 Score=46.24 Aligned_cols=75 Identities=12% Similarity=0.184 Sum_probs=59.8
Q ss_pred Cccc--CCCCeEEEEEEcC-C--CCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCC
Q 046909 22 SRLD--GAPIAHVIALDIL-G--MKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSA 96 (150)
Q Consensus 22 p~~d--e~~~~~~i~~~lP-G--~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~v 96 (150)
|.+. .+.+.+.|++.|| | ++++||.|.+.. +.|.|... . .. +.-...|...|
T Consensus 17 ~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~k--g----------~~----------~~~~g~L~~~I 73 (121)
T 3qor_A 17 PNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLK--G----------QP----------AIIDGELYNEV 73 (121)
T ss_dssp SSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEET--T----------SC----------CSEEEEBSSCB
T ss_pred CCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEc--C----------cc----------eEEeccccccc
Confidence 4455 8899999999999 4 799999999999 88888642 1 00 12245788999
Q ss_pred cccceEEEEeCC-EEEEEEeccCc
Q 046909 97 DLEHVKVHLENG-VLRITVPKLTE 119 (150)
Q Consensus 97 d~~~i~A~~~~G-vL~I~lPK~~~ 119 (150)
+++.-...+++| .|.|+|-|...
T Consensus 74 ~~deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 74 KVEESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp CGGGCEEEEETTTEEEEEEEBSSS
T ss_pred cccccEEEEcCCCEEEEEEEECCC
Confidence 999999999998 99999999865
No 23
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.29 E-value=0.0012 Score=45.84 Aligned_cols=73 Identities=12% Similarity=0.112 Sum_probs=57.9
Q ss_pred Cccc--CCCCeEEEEEEcC-CCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcc
Q 046909 22 SRLD--GAPIAHVIALDIL-GMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADL 98 (150)
Q Consensus 22 p~~d--e~~~~~~i~~~lP-G~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~ 98 (150)
|.+. .+.+.+.|++.|| |++++++.|.+.. +.|.|++. . . . .-...|...|++
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~--g----------~----------~-~~~~~L~~~I~~ 60 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQ--G----------E----------I-VIDGELLHEVDV 60 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEET--T----------E----------E-EEEEEBSSCEEE
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEEC--C----------E----------e-eEcccccccccc
Confidence 4455 7889999999996 8999999999999 89998752 1 0 0 123578899999
Q ss_pred cceEEEEeCCEEEEEEeccC
Q 046909 99 EHVKVHLENGVLRITVPKLT 118 (150)
Q Consensus 99 ~~i~A~~~~GvL~I~lPK~~ 118 (150)
+.-..++.+|-|.|+|-|..
T Consensus 61 e~S~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 61 SSLWWVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEEEEEETTEEEEEEEESS
T ss_pred ccCEEEEeCCEEEEEEEECC
Confidence 99999999999999999984
No 24
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.28 E-value=0.00057 Score=47.35 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=60.5
Q ss_pred CCccc--CCCCeEEEEEEcC-C--CCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCC
Q 046909 21 RSRLD--GAPIAHVIALDIL-G--MKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMS 95 (150)
Q Consensus 21 ~p~~d--e~~~~~~i~~~lP-G--~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~ 95 (150)
.|.+. .+.+.+.|++.|| | ++++++.|.+.. +.|.|+.. . . . +.-...|...
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~k--g----~------~----------~~~~~~L~~~ 63 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLK--G----Q------P----------PVVDGELYNE 63 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEET--T----S------C----------CSBCSCBSSC
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEEC--C----c------e----------EEEecccccc
Confidence 34555 8899999999999 6 899999999999 89999853 2 0 0 1113457789
Q ss_pred CcccceEEEEeCC-EEEEEEeccCc
Q 046909 96 ADLEHVKVHLENG-VLRITVPKLTE 119 (150)
Q Consensus 96 vd~~~i~A~~~~G-vL~I~lPK~~~ 119 (150)
|+++.-.-++.+| .|.|+|-|...
T Consensus 64 I~~e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 64 VKVEESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp BCSTTCEEEEETTTEEEEEEEBSSS
T ss_pred cccccCEEEEcCCCEEEEEEEECCC
Confidence 9999999999998 89999999875
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.13 E-value=0.0022 Score=45.90 Aligned_cols=74 Identities=12% Similarity=0.106 Sum_probs=60.4
Q ss_pred Cccc--CCCCeEEEEEEcC-CCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcc
Q 046909 22 SRLD--GAPIAHVIALDIL-GMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADL 98 (150)
Q Consensus 22 p~~d--e~~~~~~i~~~lP-G~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~ 98 (150)
|.+. .+.+.+.|++.|| |+++++|.|.+.. +.|.|+.. . . .+ -...|...|++
T Consensus 14 ~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k--g----------~----------~~-l~g~L~~~I~~ 69 (157)
T 2rh0_A 14 PWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG--G----------R----------EI-LKGKLFDSTIA 69 (157)
T ss_dssp SSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEET--T----------E----------EE-EEEEBSSCBCG
T ss_pred CcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEEC--C----------E----------EE-EeeccccccCc
Confidence 4445 8999999999998 8999999999999 89998752 1 0 01 24678999999
Q ss_pred cceEEEEeCCE-EEEEEeccCc
Q 046909 99 EHVKVHLENGV-LRITVPKLTE 119 (150)
Q Consensus 99 ~~i~A~~~~Gv-L~I~lPK~~~ 119 (150)
+.-..++.++. |.|+|-|...
T Consensus 70 eeS~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 70 DEGTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp GGCEEEEECCCEEEEEEEBSSC
T ss_pred cccEEEEcCCcEEEEEEEEcCC
Confidence 99999999885 9999999875
No 26
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.06 E-value=0.00044 Score=48.28 Aligned_cols=74 Identities=12% Similarity=0.128 Sum_probs=55.1
Q ss_pred CeEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEEEeCC
Q 046909 29 IAHVIALDILGMKKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVHLENG 108 (150)
Q Consensus 29 ~~~~i~~~lPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~G 108 (150)
+.+.|++.+|++. ++.|.+.. +.|.+++..... ....+. ..|.-.+.|...|+++..+.++.++
T Consensus 23 ~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~~----~g~~~~---------~~y~~~l~L~~~Idpe~S~~~v~~~ 86 (134)
T 2cg9_X 23 NYVLITVSIADCD--APELTIKP-SYIELKAQSKPH----VGDENV---------HHYQLHIDLYKEIIPEKTMHKVANG 86 (134)
T ss_dssp SEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC-----------C---------EEBCEEEECSSCCCSSSEEEEECCC
T ss_pred CEEEEEEEecCCC--ceEEEEEC-CEEEEEEecccc----cCCccC---------ceEEEEEEChhhccccccEEEECCC
Confidence 4499999999984 88899998 899998754320 000000 1366678999999999999999999
Q ss_pred E-EEEEEeccC
Q 046909 109 V-LRITVPKLT 118 (150)
Q Consensus 109 v-L~I~lPK~~ 118 (150)
. |.|+|.|..
T Consensus 87 ~~vei~L~K~~ 97 (134)
T 2cg9_X 87 QHYFLKLYKKD 97 (134)
T ss_dssp --CEEEEEECS
T ss_pred EEEEEEEEECC
Confidence 8 999999987
No 27
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=96.86 E-value=0.0016 Score=46.29 Aligned_cols=76 Identities=8% Similarity=0.097 Sum_probs=61.5
Q ss_pred CCccc--CCCCeEEEEEEcCCCCCCCeEEEEe-eCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCc
Q 046909 21 RSRLD--GAPIAHVIALDILGMKKDEVKIEVE-ENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSAD 97 (150)
Q Consensus 21 ~p~~d--e~~~~~~i~~~lPG~~~edI~V~v~-~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd 97 (150)
.|.++ .+.+.++|++.||++ ++++|.+. . +.|.+++. .. .+ ..|.-.+.|=..|+
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~~--------~~----------~~y~~~l~L~~~Id 61 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL-GA--------QG----------ERFEFSLELYGKIM 61 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE-TT--------TT----------EEEEEEEEBSSCEE
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE-cC--------CC----------ceEEEEeEhhhccc
Confidence 46777 889999999999998 47899998 7 78999986 22 11 13666788999999
Q ss_pred ccceEEEEeCCEEEEEEeccCc
Q 046909 98 LEHVKVHLENGVLRITVPKLTE 119 (150)
Q Consensus 98 ~~~i~A~~~~GvL~I~lPK~~~ 119 (150)
++ -+.+....-+.|+|.|..+
T Consensus 62 pe-S~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 62 TE-YRKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EE-EEEEEESSSEEEEEEECCS
T ss_pred cc-ceEEecCCEEEEEEEECCC
Confidence 99 8888888889999999875
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=86.79 E-value=1.7 Score=27.19 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=29.0
Q ss_pred EEEEEEECCCCCcccceEEEEeCCEEEEEEeccCc
Q 046909 85 KFWRQFKMPMSADLEHVKVHLENGVLRITVPKLTE 119 (150)
Q Consensus 85 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~~~ 119 (150)
.|.-.+.|| +++.+.|+..+.+|.|+|.--+...
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~~ 41 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAAR 41 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC--
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEccc
Confidence 578889999 8999999999999999999876543
No 29
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=82.08 E-value=2.5 Score=26.57 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=29.0
Q ss_pred EEEEEEECCCCCcccceEEEEeCCEEEEEEeccC
Q 046909 85 KFWRQFKMPMSADLEHVKVHLENGVLRITVPKLT 118 (150)
Q Consensus 85 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~~ 118 (150)
.|.-.+.|| +++.+.|+-.+.+|.|+|..-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 477889999 899999999999999999987654
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=81.92 E-value=3.5 Score=26.18 Aligned_cols=36 Identities=22% Similarity=0.446 Sum_probs=30.5
Q ss_pred eEEEEEEECCCCCcccceEEEEeCCEEEEEEeccCcc
Q 046909 84 GKFWRQFKMPMSADLEHVKVHLENGVLRITVPKLTEE 120 (150)
Q Consensus 84 g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~~~~ 120 (150)
..|.-.+.|| +++.+.|+-.+.+|.|+|.--+....
T Consensus 14 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~~~ 49 (100)
T 3gla_A 14 NHFVLYADLP-GIDPSQIEVQMDKGILSIRGERKSES 49 (100)
T ss_dssp SEEEEEEECT-TSCGGGCEEEEETTEEEEEEEECCGG
T ss_pred CEEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcCcC
Confidence 3577889999 79999999999999999998776543
No 31
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=81.08 E-value=3.3 Score=26.98 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=28.5
Q ss_pred EEEEEEECCCCCcccceEEEEeCCEEEEEEecc
Q 046909 85 KFWRQFKMPMSADLEHVKVHLENGVLRITVPKL 117 (150)
Q Consensus 85 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~ 117 (150)
.|.-.+.|| +++.+.|+..+.+|.|+|.--+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 578889999 89999999999999999998654
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=79.59 E-value=3.3 Score=26.70 Aligned_cols=33 Identities=9% Similarity=0.090 Sum_probs=28.9
Q ss_pred EEEEEEECCCCCcccceEEEEeCCEEEEEEeccC
Q 046909 85 KFWRQFKMPMSADLEHVKVHLENGVLRITVPKLT 118 (150)
Q Consensus 85 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~~ 118 (150)
.|.-.+.|| +++.+.|+-.+.+|.|+|.--+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 377789999 999999999999999999987754
No 33
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=78.42 E-value=4.2 Score=26.11 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=28.8
Q ss_pred eEEEEEEECCCCCcccceEEEEeCCEEEEEEecc
Q 046909 84 GKFWRQFKMPMSADLEHVKVHLENGVLRITVPKL 117 (150)
Q Consensus 84 g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~ 117 (150)
..|.-.+.|| +++.+.|+..++++.|+|.--+.
T Consensus 16 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~ 48 (102)
T 4fei_A 16 THLDLLLDVP-GVDAGTLALAEDGGQLTVSGERP 48 (102)
T ss_dssp TEEEEEEECT-TCCGGGCEEEEETTEEEEEEEEC
T ss_pred CEEEEEEECC-CCchHhEEEEEECCEEEEEEEEe
Confidence 3578889999 89999999999999999987664
No 34
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=77.14 E-value=12 Score=25.97 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=29.5
Q ss_pred EEEEEEECCCCCcccceEEEEeCCEEEEEEeccCc
Q 046909 85 KFWRQFKMPMSADLEHVKVHLENGVLRITVPKLTE 119 (150)
Q Consensus 85 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~~~ 119 (150)
.|.-.+.|| +++.+.|+..+.+|.|+|+--+...
T Consensus 67 ~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~~ 100 (161)
T 4eld_A 67 HIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPL 100 (161)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTEEEEEEECCCC
T ss_pred EEEEEEECC-CCChHhEEEEEECCEEEEEEEEccc
Confidence 477788998 7999999999999999999887663
No 35
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=75.97 E-value=6.9 Score=25.93 Aligned_cols=34 Identities=12% Similarity=0.097 Sum_probs=29.4
Q ss_pred EEEEEEECCCCCcccceEEEEeC-CEEEEEEeccCc
Q 046909 85 KFWRQFKMPMSADLEHVKVHLEN-GVLRITVPKLTE 119 (150)
Q Consensus 85 ~f~r~~~LP~~vd~~~i~A~~~~-GvL~I~lPK~~~ 119 (150)
.|.-.+.|| +++.+.|+..+.+ |.|+|..-+...
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 477778999 7999999999999 999999887654
No 36
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=66.03 E-value=8.6 Score=27.44 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=28.8
Q ss_pred EEEEEEECCCCCcccceEEEEeCCEEEEEEeccC
Q 046909 85 KFWRQFKMPMSADLEHVKVHLENGVLRITVPKLT 118 (150)
Q Consensus 85 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~~ 118 (150)
.|.-.+.|| +++.+.|+.++.+|.|+|.--+..
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 477789999 899999999999999999987644
No 37
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=64.34 E-value=24 Score=24.25 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=27.9
Q ss_pred EEEEEEECCCCCcccceEEEEe-CCEEEEEEeccCc
Q 046909 85 KFWRQFKMPMSADLEHVKVHLE-NGVLRITVPKLTE 119 (150)
Q Consensus 85 ~f~r~~~LP~~vd~~~i~A~~~-~GvL~I~lPK~~~ 119 (150)
.|.-.+.|| +++.+.|+..+. ++.|+|..-+...
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 366678899 899999999995 6799999877654
No 38
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=62.55 E-value=5.8 Score=24.19 Aligned_cols=15 Identities=27% Similarity=0.437 Sum_probs=12.4
Q ss_pred cceEEEEeCCEEEEE
Q 046909 99 EHVKVHLENGVLRIT 113 (150)
Q Consensus 99 ~~i~A~~~~GvL~I~ 113 (150)
..|.|.|+||||+--
T Consensus 3 k~IeAiYEnGVfkPL 17 (69)
T 2nwt_A 3 KIIEAVYENGVFKPL 17 (69)
T ss_dssp CCEEEEEETTEEEES
T ss_pred ceEEEEEECCEEeEC
Confidence 468999999999753
No 39
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=62.35 E-value=9.7 Score=24.70 Aligned_cols=19 Identities=26% Similarity=0.440 Sum_probs=15.5
Q ss_pred CCCeEEEEeeCcEEEEEEEE
Q 046909 42 KDEVKIEVEENMVLRVSGER 61 (150)
Q Consensus 42 ~edI~V~v~~~~~L~I~g~~ 61 (150)
|+.++|++.+ +.|+|+|.+
T Consensus 20 P~gV~V~i~~-~~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPR 38 (100)
T ss_dssp CSSCEEEEET-TEEEEEETT
T ss_pred CCCCEEEEeC-CEEEEECCC
Confidence 4678899998 899999863
No 40
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=58.19 E-value=23 Score=26.19 Aligned_cols=46 Identities=15% Similarity=0.289 Sum_probs=31.9
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEEEeCCEEEEEEecc
Q 046909 42 KDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVHLENGVLRITVPKL 117 (150)
Q Consensus 42 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~ 117 (150)
++.|+|++.+ +.++|+|.+-. ..+.| +.. +....++|.|.|+.+..
T Consensus 39 P~gV~V~i~~-~~VtVKGPkG~----------------------L~~~~--~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPKGE----------------------LTVPY--NTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeC-CEEEEECCCEE----------------------EEEEC--CCC-----eEEEEECCEEEEEcCCC
Confidence 4678899998 89999987433 55544 433 44557889888876544
No 41
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=56.30 E-value=19 Score=25.78 Aligned_cols=46 Identities=24% Similarity=0.429 Sum_probs=32.5
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEEEeCCEEEEEEecc
Q 046909 42 KDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVHLENGVLRITVPKL 117 (150)
Q Consensus 42 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~ 117 (150)
|+.++|++.+ +.++|+|.+ |...+.| +.. +....+||.|.|+.+..
T Consensus 11 P~gV~V~i~~-~~VtVkGpk----------------------G~L~~~~--~~~-----v~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPK----------------------GELTRTF--HPD-----MTITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEET-TEEEEEETT----------------------EEEEEEC--CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCC----------------------eEEEEEc--CCC-----EEEEEeCCEEEEEcCCC
Confidence 4678899998 899999863 3455554 433 45567899988886544
No 42
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=52.06 E-value=21 Score=25.60 Aligned_cols=47 Identities=17% Similarity=0.304 Sum_probs=32.3
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEEEeCCEEEEEEecc
Q 046909 42 KDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVHLENGVLRITVPKL 117 (150)
Q Consensus 42 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~ 117 (150)
|+.++|++.+ +.++|+|.+ |...+.|. +. .++...++|.|.|..+..
T Consensus 9 P~gV~v~i~~-~~vtVkGpk----------------------G~L~~~~~-~~-----~v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGDN----------------------GSVTRRLW-YP-----DIDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEET-TEEEEEETT----------------------EEEEEECC-CT-----TCEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCC----------------------eEEEEEEE-CC-----eEEEEEECCEEEEEcCCC
Confidence 4678899998 899999863 33555542 32 344557899988876543
No 43
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=51.53 E-value=17 Score=26.21 Aligned_cols=45 Identities=27% Similarity=0.509 Sum_probs=30.3
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEEEeCCEEEEEEe
Q 046909 42 KDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVHLENGVLRITVP 115 (150)
Q Consensus 42 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lP 115 (150)
|+.++|++.+ +.++|+|.+ |...|.|.-| . ++..++++.|+|..+
T Consensus 14 P~gV~v~i~~-~~V~VkGpk----------------------G~L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGPK----------------------GELEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESS-SEEEEECSS----------------------CEEEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEcCC----------------------eEEEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 4788999988 899999863 3355554322 2 444578888888753
No 44
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=50.87 E-value=16 Score=23.91 Aligned_cols=34 Identities=15% Similarity=0.326 Sum_probs=21.5
Q ss_pred ceEEEEeCCEEEEEEeccCc---ccCCCCeEEEeeec
Q 046909 100 HVKVHLENGVLRITVPKLTE---EKRRQPKVISINDE 133 (150)
Q Consensus 100 ~i~A~~~~GvL~I~lPK~~~---~~~~~~~~I~I~~~ 133 (150)
.+.+.+.+|||+|+++.... -++++.+.|=+...
T Consensus 29 d~D~e~~~gVLti~f~~~~~~VINkQ~P~~QIWlaSp 65 (106)
T 1ew4_A 29 DIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATK 65 (106)
T ss_dssp CCEEEEETTEEEEECTTSCEEEEEEETTTTEEEEECS
T ss_pred CEeeeccCCEEEEEECCCCEEEEeCCchhhhheEecC
Confidence 47888999999999974431 12334455544444
No 45
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=40.51 E-value=40 Score=24.12 Aligned_cols=44 Identities=27% Similarity=0.472 Sum_probs=30.8
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEEEeCCEEEEEEe
Q 046909 42 KDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVHLENGVLRITVP 115 (150)
Q Consensus 42 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lP 115 (150)
|+.++|++.+ +.++|+|.+ |...|.| +.. +...++++.|.|..+
T Consensus 12 P~gV~v~i~~-~~v~VkGpk----------------------G~L~~~~--~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGPK----------------------GELEVPV--SPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEET-TEEEEECSS----------------------CEEEEEC--CTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEeCC----------------------cEEEEEe--CCC-----EEEEEECCEEEEEEC
Confidence 5788999998 899999863 3355554 433 444567998888753
No 46
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=39.97 E-value=29 Score=25.14 Aligned_cols=19 Identities=32% Similarity=0.545 Sum_probs=16.0
Q ss_pred CCCeEEEEeeCcEEEEEEEE
Q 046909 42 KDEVKIEVEENMVLRVSGER 61 (150)
Q Consensus 42 ~edI~V~v~~~~~L~I~g~~ 61 (150)
|+.++|++.+ +.++|+|.+
T Consensus 13 P~gV~v~i~~-~~V~VkGPk 31 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGPR 31 (190)
T ss_dssp CTTCEEEEET-TEEEEEETT
T ss_pred CCCCEEEEeC-CEEEEECCC
Confidence 4788999998 899999864
No 47
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=39.77 E-value=24 Score=23.84 Aligned_cols=16 Identities=31% Similarity=0.698 Sum_probs=14.2
Q ss_pred eEEEEeCCEEEEEEec
Q 046909 101 VKVHLENGVLRITVPK 116 (150)
Q Consensus 101 i~A~~~~GvL~I~lPK 116 (150)
+.+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7888999999999974
No 48
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=38.91 E-value=69 Score=21.20 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=24.3
Q ss_pred eEEEEEEECCCCCcccceEEEEeCCEEEEEE
Q 046909 84 GKFWRQFKMPMSADLEHVKVHLENGVLRITV 114 (150)
Q Consensus 84 g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~l 114 (150)
....-.|.||.+++.+.+...+...-|+|.+
T Consensus 14 ~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 14 NEINIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp TEEEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred CEEEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 3466789999999999999999999999987
No 49
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=38.70 E-value=39 Score=24.78 Aligned_cols=48 Identities=10% Similarity=0.306 Sum_probs=28.4
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEe---eeeeeEEEEEEECCCC
Q 046909 42 KDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRA---ESTFGKFWRQFKMPMS 95 (150)
Q Consensus 42 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~---e~~~g~f~r~~~LP~~ 95 (150)
++++ .+.+++.|+|++.+.. ...-...++..+ ...+|.|+-+++||..
T Consensus 49 ~~n~--~v~~~G~L~I~~~~~~----~~~~~S~~i~S~~~f~~~yG~~E~r~klp~g 99 (245)
T 2hyk_A 49 RANS--ALDGNGNLVITARQEA----DGGYTSARLTTQNKVQPQYGRVEASIQIPRG 99 (245)
T ss_dssp TTTE--EECSSSCEEEEEEECT----TSCEEECEEECTTTCCCCSEEEEEEEECCCS
T ss_pred ccce--EEecCCEEEEEEEecC----CCCEEEEEEEccCcccccCCeEEEEEEcCCC
Confidence 3444 4554478999987654 111122233332 2457999999999964
No 50
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=38.40 E-value=52 Score=23.76 Aligned_cols=46 Identities=17% Similarity=0.457 Sum_probs=30.8
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEE-EeCCEEEEEEec
Q 046909 42 KDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVH-LENGVLRITVPK 116 (150)
Q Consensus 42 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~-~~~GvL~I~lPK 116 (150)
|+.++|++.+ +.++|+|.+ |...|.| +. + .+... .++|.|.|..+-
T Consensus 13 P~gV~v~i~~-~~V~VkGPk----------------------G~L~~~~--~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGPR----------------------GTLTKNL--KH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEET-TEEEEEETT----------------------EEEEEEC--TT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcCC----------------------eEEEEEc--cC-C---cEEEEEecCCeEEEEECC
Confidence 5788999998 899999864 3355544 32 1 23334 468988888654
No 51
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=34.40 E-value=67 Score=24.29 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=28.0
Q ss_pred CCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEE-EeeeeeeEEEEEEECCCC
Q 046909 41 KKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRH-RAESTFGKFWRQFKMPMS 95 (150)
Q Consensus 41 ~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~-~~e~~~g~f~r~~~LP~~ 95 (150)
.++++.| .+ +.|+|++.+.. +.++. .....+|.|+-++.||..
T Consensus 31 ~~~Nv~v--~~-G~L~L~~~k~t---------sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQ-GSLTIWLDSTS---------GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ET-TEEEEEECSSC---------CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--EC-CEEEEEEecCC---------CCEEEECceEeeEEEEEEEEeCCC
Confidence 4556665 56 78999875322 22222 345678999999999964
No 52
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=32.20 E-value=30 Score=23.47 Aligned_cols=35 Identities=26% Similarity=0.394 Sum_probs=21.8
Q ss_pred cceEEEEeCCEEEEEEe-ccCc---ccCCCCeEEEeeec
Q 046909 99 EHVKVHLENGVLRITVP-KLTE---EKRRQPKVISINDE 133 (150)
Q Consensus 99 ~~i~A~~~~GvL~I~lP-K~~~---~~~~~~~~I~I~~~ 133 (150)
..+.+.+.+|||+|+++ .... -++.+.+.|=+...
T Consensus 40 ~d~D~e~~~gVLti~f~~~~g~~VINkQ~P~~QIWLASp 78 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKAIWLSSP 78 (129)
T ss_dssp TTCEEEEETTEEEEECCTTCCEEEEEEETTTTEEEEECS
T ss_pred cceeeecCCCEEEEEEcCCCCEEEEeCCchhhHhheeCC
Confidence 45778899999999996 3211 02334555555444
No 53
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=31.17 E-value=47 Score=24.03 Aligned_cols=47 Identities=26% Similarity=0.314 Sum_probs=31.7
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEEEeCCE---EEEEEecc
Q 046909 42 KDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVHLENGV---LRITVPKL 117 (150)
Q Consensus 42 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~Gv---L~I~lPK~ 117 (150)
|+.++|++.+ +.++|+|.+ |...+.| |.. .+....++|. |.|..+..
T Consensus 13 P~gV~V~i~~-~~VtVkGpk----------------------G~L~~~~--~~~----~v~i~~~~~~~~~i~v~~~~~ 62 (192)
T 2zkr_e 13 PENVDITLKG-RTVIVKGPR----------------------GTLRRDF--NHI----NVELSLLGKKKKRLRVDKWWG 62 (192)
T ss_dssp CTTCEEEEET-TEEEEEETT----------------------EEEEEEC--CSS----SCEEEEETTTTCEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCC----------------------eEEEEEe--CCC----CEEEEEecCceeEEEEEcCCC
Confidence 5788999998 899999863 3355444 331 3455677887 77775543
No 54
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=30.76 E-value=28 Score=21.10 Aligned_cols=24 Identities=25% Similarity=0.425 Sum_probs=19.4
Q ss_pred CCCCCCeEEEEeeCcEEEEEEEEec
Q 046909 39 GMKKDEVKIEVEENMVLRVSGERKS 63 (150)
Q Consensus 39 G~~~edI~V~v~~~~~L~I~g~~~~ 63 (150)
-|+.+.|.+...- +.|.|+|+.=.
T Consensus 17 sFd~e~i~L~T~~-G~L~IkG~~L~ 40 (71)
T 2ks0_A 17 SFDPKEILLETIQ-GVLSIKGEKLG 40 (71)
T ss_dssp EECSSEEEEEETT-EEEEEEEECCC
T ss_pred EECCCEEEEEeCc-eEEEEEcCCcE
Confidence 4678899999988 89999998443
No 55
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=30.63 E-value=41 Score=19.04 Aligned_cols=22 Identities=9% Similarity=0.271 Sum_probs=18.0
Q ss_pred CCCCeEEEEeeCcEEEEEEEEec
Q 046909 41 KKDEVKIEVEENMVLRVSGERKS 63 (150)
Q Consensus 41 ~~edI~V~v~~~~~L~I~g~~~~ 63 (150)
.-+||+|..++ +.+++.|+...
T Consensus 31 gyndinvtwdg-dtvtvegqleg 52 (62)
T 2gjh_A 31 GYNDINVTWDG-DTVTVEGQLEG 52 (62)
T ss_dssp TCCSCEEEECS-SCEEEEEECCC
T ss_pred CcccceeEEcC-CEEEEEeEEcC
Confidence 34799999999 89999998544
No 56
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=29.75 E-value=1.1e+02 Score=23.70 Aligned_cols=48 Identities=17% Similarity=0.340 Sum_probs=30.0
Q ss_pred CCCCeEEEEeeCcEEEEEEEEecCCCcccc-ccC----------ceEEEe--eeeeeEEEEEEECCCC
Q 046909 41 KKDEVKIEVEENMVLRVSGERKSDDYYKEG-VEG----------EKRHRA--ESTFGKFWRQFKMPMS 95 (150)
Q Consensus 41 ~~edI~V~v~~~~~L~I~g~~~~~~~~~~~-~~~----------~~~~~~--e~~~g~f~r~~~LP~~ 95 (150)
+++++.| ++ +.|+|++.+.. ... ..+ .++..+ ...+|.|+-++.||..
T Consensus 85 ~~~Nv~v--~d-G~L~I~a~~~~----~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSV--KK-GCLRIINTVLS----PTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEE--ET-TEEEEECEEEE----EEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEE--EC-CEEEEEEEeCC----CCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 4566555 57 89999998764 110 001 122222 3678999999999975
No 57
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=29.09 E-value=18 Score=26.99 Aligned_cols=47 Identities=26% Similarity=0.364 Sum_probs=30.9
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEEEeCCEEEEEEecc
Q 046909 42 KDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVHLENGVLRITVPKL 117 (150)
Q Consensus 42 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~ 117 (150)
|+.|+|++.+ +.|+|+|.+.. ..+.| +..++.. ..+||.|.|..+..
T Consensus 54 P~gV~V~i~~-~~VtVKGPkG~----------------------L~~~~--~~~v~i~----~~e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALEG-QDLKVKGPLGE----------------------LALTY--PREVELT----KEESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEESS-SEEEECCSSCC----------------------EEEEC--CSSCEEE----ECSSSCEEEECSSC
T ss_pred CCCCEEEEeC-CEEEEECCCeE----------------------EEEEc--CCCEEEE----EecCCEEEEEcCCC
Confidence 3677889988 89999986433 55444 5444321 45788888876543
No 58
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=29.06 E-value=34 Score=22.94 Aligned_cols=26 Identities=8% Similarity=0.067 Sum_probs=22.7
Q ss_pred cCCCCCCCeEEEEeeCcEEEEEEEEec
Q 046909 37 ILGMKKDEVKIEVEENMVLRVSGERKS 63 (150)
Q Consensus 37 lPG~~~edI~V~v~~~~~L~I~g~~~~ 63 (150)
-|.+++-.|.|.+++ +.++++|....
T Consensus 2 ~~~~~p~~i~V~v~~-G~VTLsG~Vp~ 27 (132)
T 2kgs_A 2 ASALSLSLLSISRSG-NTVTLIGDFPD 27 (132)
T ss_dssp CCCCCEEEEEEEECS-SEEEEEEEESC
T ss_pred CCcccceeEEEEEEC-CEEEEEEECCC
Confidence 467788889999999 99999999876
No 59
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=28.87 E-value=1.2e+02 Score=19.68 Aligned_cols=32 Identities=16% Similarity=0.246 Sum_probs=27.5
Q ss_pred eEEEEEEECCCCC-cccceEEEEeCCEEEEEEe
Q 046909 84 GKFWRQFKMPMSA-DLEHVKVHLENGVLRITVP 115 (150)
Q Consensus 84 g~f~r~~~LP~~v-d~~~i~A~~~~GvL~I~lP 115 (150)
....-+|.||.++ +.+.+...+...-|+|.+.
T Consensus 29 ~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 29 TDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred cEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 3467789999888 9999999999999999874
No 60
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=26.46 E-value=31 Score=21.27 Aligned_cols=15 Identities=27% Similarity=0.647 Sum_probs=12.9
Q ss_pred ccceEEEEeCCEEEE
Q 046909 98 LEHVKVHLENGVLRI 112 (150)
Q Consensus 98 ~~~i~A~~~~GvL~I 112 (150)
.++-++.|++|||+|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 557889999999998
No 61
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=25.49 E-value=1.2e+02 Score=22.28 Aligned_cols=44 Identities=7% Similarity=0.083 Sum_probs=25.9
Q ss_pred EEEeeCcEEEEEEEEecCCCccccccCceEEEe-eeeeeEEEEEEECCC
Q 046909 47 IEVEENMVLRVSGERKSDDYYKEGVEGEKRHRA-ESTFGKFWRQFKMPM 94 (150)
Q Consensus 47 V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-e~~~g~f~r~~~LP~ 94 (150)
|.+.+++.|+|++.+.. ...-.+.++..+ ...+|.|+-++.+|.
T Consensus 63 v~v~~~G~L~l~~~~~~----~~~~ts~~i~S~~~~~yG~~e~r~K~p~ 107 (238)
T 3o5s_A 63 VSMTSLGEMRLALTSPA----YNKFDCGENRSVQTYGYGLYEVRMKPAK 107 (238)
T ss_dssp EEECTTSCEEEEEEEEE----TTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEeCCCEEEEEEEeCC----CCceeEEEEEEcCeEccEEEEEEEEeCC
Confidence 55665467899887654 111111222221 356899999999884
No 62
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=24.96 E-value=2.1e+02 Score=21.13 Aligned_cols=70 Identities=13% Similarity=0.219 Sum_probs=43.4
Q ss_pred EEEEE---EcCCCCCCCeEEEEee-CcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEEEe
Q 046909 31 HVIAL---DILGMKKDEVKIEVEE-NMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVHLE 106 (150)
Q Consensus 31 ~~i~~---~lPG~~~edI~V~v~~-~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~ 106 (150)
|.+.+ .|||+..+==-+.+.. ++.|.+.... ....+.--.. |.+.|+++|...-|.+.|.. ..
T Consensus 13 y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~-----------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~-~~ 79 (255)
T 3qqz_A 13 YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINK-----------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEY-IG 79 (255)
T ss_dssp CEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEET-----------TEEEEEEETT-CCEEEEEECSSCSSEEEEEE-CS
T ss_pred eEEEEeceECCCcccCcceeEEeCCCCEEEEEECC-----------CCeEEEEeCC-CCEEEEEecCCCCChHHeEE-eC
Confidence 44544 4999987522366652 2677765431 2233333333 78999999987788998865 36
Q ss_pred CCEEEEE
Q 046909 107 NGVLRIT 113 (150)
Q Consensus 107 ~GvL~I~ 113 (150)
+|.+.|.
T Consensus 80 ~g~~~vs 86 (255)
T 3qqz_A 80 DNQFVIS 86 (255)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 7766554
No 63
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=24.15 E-value=1.8e+02 Score=19.94 Aligned_cols=32 Identities=9% Similarity=0.279 Sum_probs=27.5
Q ss_pred eEEEEEEECCCCCcccceEEEEeCCEEEEEEe
Q 046909 84 GKFWRQFKMPMSADLEHVKVHLENGVLRITVP 115 (150)
Q Consensus 84 g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lP 115 (150)
....-+|.||..+....+...+...-|+|.+.
T Consensus 23 ~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 23 EEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp SEEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred CEEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 45677899999999999999999999999873
No 64
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=24.07 E-value=1.5e+02 Score=19.70 Aligned_cols=32 Identities=16% Similarity=0.418 Sum_probs=20.8
Q ss_pred cceEEEE---eCCEEEEEEeccCcccCCCCeEEEeeec
Q 046909 99 EHVKVHL---ENGVLRITVPKLTEEKRRQPKVISINDE 133 (150)
Q Consensus 99 ~~i~A~~---~~GvL~I~lPK~~~~~~~~~~~I~I~~~ 133 (150)
.+|+.+| .||+|.|+.--.... ....|.|+..
T Consensus 98 ~~IeVtf~iD~nGiL~V~a~d~~tg---~~~~i~i~~~ 132 (135)
T 1q5l_A 98 PQIEVTFDIDADGILHVSAKDKNSG---KEQKITIKAS 132 (135)
T ss_dssp CCEEEEEEECTTSEEEEEEEETTTC---CEEEEEEECS
T ss_pred eEEEEEEEECCCCEEEEEEEECCCC---CEEEEEEecC
Confidence 3677666 499999998643332 4566776544
No 65
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=23.67 E-value=32 Score=24.56 Aligned_cols=42 Identities=17% Similarity=0.323 Sum_probs=28.9
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEeeeeeeEEEEEEECCCCCcccceEEEEeCCEEEEE
Q 046909 42 KDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRAESTFGKFWRQFKMPMSADLEHVKVHLENGVLRIT 113 (150)
Q Consensus 42 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~ 113 (150)
|+.++|++.+ +.++|+|.+-. ..+.| +.. +...++++.|+|.
T Consensus 11 P~gV~v~i~~-~~V~VkGpkG~----------------------L~~~~--~~~-----v~i~~~~~~l~v~ 52 (176)
T 3r8s_G 11 PAGVDVKING-QVITIKGKNGE----------------------LTRTL--NDA-----VEVKHADNTLTFG 52 (176)
T ss_dssp CTTCCCEESS-SEEECCBTTBC----------------------CEEEC--CSS-----CEEEEETTEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcCCEE----------------------EEEEC--CCC-----EEEEEeCCEEEEE
Confidence 4678888888 88998886433 45444 433 4455788988887
No 66
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=23.10 E-value=1.5e+02 Score=21.70 Aligned_cols=46 Identities=22% Similarity=0.283 Sum_probs=27.0
Q ss_pred EEEeeCcEEEEEEEEecCCCccccccCceEEE---eeeeeeEEEEEEECCCC
Q 046909 47 IEVEENMVLRVSGERKSDDYYKEGVEGEKRHR---AESTFGKFWRQFKMPMS 95 (150)
Q Consensus 47 V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~---~e~~~g~f~r~~~LP~~ 95 (150)
|.+.+ +.|+|++.+.... ...-...++.. ....+|.|+-++.||..
T Consensus 49 v~v~~-G~L~i~~~~~~~~--~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 49 ARVGG-GVLIIEARRESYE--GREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp EEEET-TEEEEEEEEEEET--TEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred EEEEC-CEEEEEEEeccCC--CCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 45567 8999999765300 00111222222 13467999999999964
No 67
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=22.70 E-value=1.1e+02 Score=20.03 Aligned_cols=31 Identities=16% Similarity=0.167 Sum_probs=26.6
Q ss_pred EEEEEEECCCC--CcccceEEEEeCCEEEEEEe
Q 046909 85 KFWRQFKMPMS--ADLEHVKVHLENGVLRITVP 115 (150)
Q Consensus 85 ~f~r~~~LP~~--vd~~~i~A~~~~GvL~I~lP 115 (150)
...-.|.||.+ +..+.+...+...-|+|.+.
T Consensus 18 ~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k 50 (131)
T 1wfi_A 18 ELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK 50 (131)
T ss_dssp EEEEEECCCCSSCCCTTSEEEEEETTEEEEEET
T ss_pred EEEEEEECCCCCcccccceEEEEeCCEEEEEEC
Confidence 45667889987 89999999999999999983
No 68
>1nh2_C Transcription initiation factor IIA large chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: b.56.1.1 PDB: 1ytf_C*
Probab=21.02 E-value=46 Score=20.65 Aligned_cols=15 Identities=33% Similarity=0.488 Sum_probs=12.9
Q ss_pred ccceEEEEeCCEEEE
Q 046909 98 LEHVKVHLENGVLRI 112 (150)
Q Consensus 98 ~~~i~A~~~~GvL~I 112 (150)
.++-++.|++||++|
T Consensus 48 KnKWKc~LKdGi~~i 62 (79)
T 1nh2_C 48 KARWKCSLKDGVVTI 62 (79)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred cceEEEEEeeeEEEE
Confidence 456889999999998
No 69
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2
Probab=20.53 E-value=1.6e+02 Score=23.02 Aligned_cols=49 Identities=16% Similarity=0.112 Sum_probs=29.2
Q ss_pred CCCCeEEEEeeCcEEEEEEEEecCCCccccccCceEEEe-eeeee-EEEEEEECCCC
Q 046909 41 KKDEVKIEVEENMVLRVSGERKSDDYYKEGVEGEKRHRA-ESTFG-KFWRQFKMPMS 95 (150)
Q Consensus 41 ~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-e~~~g-~f~r~~~LP~~ 95 (150)
+++++. +.+ +.|+|++.+... ...-.+.++..+ ...|| .|+-+++||..
T Consensus 103 ~~~Nv~--v~d-G~L~I~a~~~~g---~~~~tSg~i~Sk~~f~YGr~vEaRaKlp~g 153 (346)
T 1o4z_A 103 KRDRSY--VAD-GELKMWATRKPG---SDKINMGCITSKTRVVYPVYIEARAKVMNS 153 (346)
T ss_dssp CGGGEE--EET-TEEEEECEECTT---SSCEEECEEEESSCBCSSEEEEEEEECCSS
T ss_pred cccCEE--EEC-CEEEEEEEecCC---CCcEEeeEEEeCccEeCCeEEEEEEEecCC
Confidence 345554 557 899999987641 011112222222 25689 59999999965
No 70
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=20.33 E-value=1.8e+02 Score=18.76 Aligned_cols=32 Identities=9% Similarity=0.111 Sum_probs=27.7
Q ss_pred eEEEEEEECCCC--CcccceEEEEeCCEEEEEEe
Q 046909 84 GKFWRQFKMPMS--ADLEHVKVHLENGVLRITVP 115 (150)
Q Consensus 84 g~f~r~~~LP~~--vd~~~i~A~~~~GvL~I~lP 115 (150)
....-+|.||.+ +....+...+...-|+|.+.
T Consensus 26 ~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k 59 (121)
T 3qor_A 26 SELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK 59 (121)
T ss_dssp SEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET
T ss_pred ceEEEEEECCCCCcccccceEEEEEcCEEEEEEc
Confidence 457778999988 89999999999999999875
No 71
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=20.29 E-value=1.8e+02 Score=20.57 Aligned_cols=43 Identities=7% Similarity=0.059 Sum_probs=24.0
Q ss_pred EEeeCcEEEEEEEEecCCCccccccCceEEEe-eeeeeEEEEEEECCC
Q 046909 48 EVEENMVLRVSGERKSDDYYKEGVEGEKRHRA-ESTFGKFWRQFKMPM 94 (150)
Q Consensus 48 ~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-e~~~g~f~r~~~LP~ 94 (150)
.+.+++.|.|++.+.. ...-.+.++..+ ...+|.|+-+++||.
T Consensus 40 ~v~~~G~L~i~~~~~~----~~~~~s~~i~S~~~f~yG~~E~r~k~p~ 83 (214)
T 2ayh_A 40 NFTNDGKLKLGLTSSA----YNKFDCAEYRSTNIYGYGLYEVSMKPAK 83 (214)
T ss_dssp EECTTSCEEEEEEEEE----TTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEcCCCEEEEEEecCC----CCceeeEEEEECCeEeeEEEEEEEEcCC
Confidence 4444367888887554 101111111111 246899999999985
Done!