BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046914
(90 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|4678934|emb|CAB41325.1| putative protein [Arabidopsis thaliana]
Length = 384
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 45/52 (86%), Positives = 48/52 (92%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
A GMNFRHTLYP+YK+NRPPTPDTIVQGLQYLKASIKAMSIKVIEV V+ D
Sbjct: 190 AKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEVRVVSPD 241
>gi|145332811|ref|NP_001078271.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|332645361|gb|AEE78882.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
Length = 413
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/52 (88%), Positives = 48/52 (92%), Gaps = 1/52 (1%)
Query: 31 HDLY-GACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
HD Y A GMNFRHTLYP+YK+NRPPTPDTIVQGLQYLKASIKAMSIKVIEV
Sbjct: 158 HDGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 209
>gi|147858394|emb|CAN81408.1| hypothetical protein VITISV_010447 [Vitis vinifera]
Length = 734
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/54 (81%), Positives = 48/54 (88%)
Query: 28 LDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
L ++ L G+NFRHTLYPSYK+NRPPTPDTIVQGLQYLKASIKAMSIKVIEV
Sbjct: 429 LKLYMLKSCEGLNFRHTLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 482
>gi|42565846|ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|145362483|ref|NP_974414.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|109946597|gb|ABG48477.1| At3g52050 [Arabidopsis thaliana]
gi|332645358|gb|AEE78879.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|332645359|gb|AEE78880.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
Length = 425
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/46 (93%), Positives = 45/46 (97%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A GMNFRHTLYP+YK+NRPPTPDTIVQGLQYLKASIKAMSIKVIEV
Sbjct: 176 AKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 221
>gi|145332809|ref|NP_001078270.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|332645360|gb|AEE78881.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
Length = 448
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/46 (93%), Positives = 45/46 (97%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A GMNFRHTLYP+YK+NRPPTPDTIVQGLQYLKASIKAMSIKVIEV
Sbjct: 199 AKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 244
>gi|238480047|ref|NP_001154673.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|332645362|gb|AEE78883.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
Length = 365
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/44 (95%), Positives = 44/44 (100%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
GMNFRHTLYP+YK+NRPPTPDTIVQGLQYLKASIKAMSIKVIEV
Sbjct: 183 GMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 226
>gi|359478321|ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vinifera]
gi|296084279|emb|CBI24667.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/46 (93%), Positives = 45/46 (97%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A G+NFRHTLYPSYK+NRPPTPDTIVQGLQYLKASIKAMSIKVIEV
Sbjct: 193 AKGLNFRHTLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 238
>gi|297816476|ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arabidopsis lyrata subsp.
lyrata]
gi|297321959|gb|EFH52380.1| hypothetical protein ARALYDRAFT_485561 [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/46 (93%), Positives = 45/46 (97%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A GMNFRHTLYP+YK+NRPPTPDTIVQGLQYLKASIKAMSIKVIEV
Sbjct: 205 AKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 250
>gi|110741816|dbj|BAE98851.1| hypothetical protein [Arabidopsis thaliana]
Length = 131
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 47/53 (88%), Gaps = 1/53 (1%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
MNFRHTLYP+YK+NRPPTPDTIVQGLQYLKASIKAMSIKVIEV V +D G
Sbjct: 1 MNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEVPGVEADDVIG 53
>gi|255579458|ref|XP_002530572.1| DNA polymerase I, putative [Ricinus communis]
gi|223529871|gb|EEF31802.1| DNA polymerase I, putative [Ricinus communis]
Length = 246
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 47/53 (88%), Gaps = 1/53 (1%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
MNFRHTLYPSYK+NRPPTPDTI+QGLQYLKASI+AMSIKVIEV V +D G
Sbjct: 1 MNFRHTLYPSYKSNRPPTPDTIIQGLQYLKASIRAMSIKVIEVPGVEADDVIG 53
>gi|356502746|ref|XP_003520177.1| PREDICTED: DNA polymerase I, thermostable-like [Glycine max]
Length = 444
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/48 (81%), Positives = 43/48 (89%)
Query: 34 YGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
+ A G NFRH LYP+YK+NRPPTPDTIVQGLQY KASIKAMSIK+IEV
Sbjct: 194 FTAKGQNFRHNLYPAYKSNRPPTPDTIVQGLQYFKASIKAMSIKIIEV 241
>gi|357475547|ref|XP_003608059.1| DNA polymerase I [Medicago truncatula]
gi|355509114|gb|AES90256.1| DNA polymerase I [Medicago truncatula]
Length = 491
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/44 (88%), Positives = 42/44 (95%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G NFRH LYP+YK+NRPPTPDTIVQGLQYLKASIKAM+IKVIEV
Sbjct: 222 GQNFRHNLYPAYKSNRPPTPDTIVQGLQYLKASIKAMAIKVIEV 265
>gi|356519672|ref|XP_003528494.1| PREDICTED: DNA polymerase I, thermostable-like [Glycine max]
Length = 436
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 34 YGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
+ A G NFRH LYP+YK+NRPPTPDTIVQGLQY KASIKAMSIK+IEV V +D G
Sbjct: 186 FTAKGQNFRHNLYPAYKSNRPPTPDTIVQGLQYFKASIKAMSIKIIEVPGVEADDVIG 243
>gi|24421685|gb|AAN60992.1| Unknown protein [Oryza sativa Japonica Group]
Length = 443
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/46 (86%), Positives = 42/46 (91%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A GM FRH LYPSYK+NR PTPDTIVQG+QYLKASIKAMSIKVIEV
Sbjct: 196 AKGMTFRHMLYPSYKSNRIPTPDTIVQGMQYLKASIKAMSIKVIEV 241
>gi|115451687|ref|NP_001049444.1| Os03g0227300 [Oryza sativa Japonica Group]
gi|108706959|gb|ABF94754.1| 5'-3' exonuclease, N-terminal resolvase-like domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113547915|dbj|BAF11358.1| Os03g0227300 [Oryza sativa Japonica Group]
gi|215704203|dbj|BAG93043.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624502|gb|EEE58634.1| hypothetical protein OsJ_10000 [Oryza sativa Japonica Group]
Length = 421
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/46 (86%), Positives = 42/46 (91%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A GM FRH LYPSYK+NR PTPDTIVQG+QYLKASIKAMSIKVIEV
Sbjct: 174 AKGMTFRHMLYPSYKSNRIPTPDTIVQGMQYLKASIKAMSIKVIEV 219
>gi|218192373|gb|EEC74800.1| hypothetical protein OsI_10602 [Oryza sativa Indica Group]
Length = 421
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/46 (86%), Positives = 42/46 (91%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A GM FRH LYPSYK+NR PTPDTIVQG+QYLKASIKAMSIKVIEV
Sbjct: 174 AKGMTFRHMLYPSYKSNRIPTPDTIVQGMQYLKASIKAMSIKVIEV 219
>gi|108706960|gb|ABF94755.1| 5'-3' exonuclease, N-terminal resolvase-like domain containing
protein, expressed [Oryza sativa Japonica Group]
Length = 416
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/46 (86%), Positives = 42/46 (91%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A GM FRH LYPSYK+NR PTPDTIVQG+QYLKASIKAMSIKVIEV
Sbjct: 169 AKGMTFRHMLYPSYKSNRIPTPDTIVQGMQYLKASIKAMSIKVIEV 214
>gi|242036411|ref|XP_002465600.1| hypothetical protein SORBIDRAFT_01g041870 [Sorghum bicolor]
gi|241919454|gb|EER92598.1| hypothetical protein SORBIDRAFT_01g041870 [Sorghum bicolor]
Length = 421
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/46 (82%), Positives = 42/46 (91%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A GM FRH LYP+YK+NR PTPDT+VQG+QYLKASIKAMSIKVIEV
Sbjct: 175 AKGMTFRHMLYPAYKSNRTPTPDTVVQGMQYLKASIKAMSIKVIEV 220
>gi|194696700|gb|ACF82434.1| unknown [Zea mays]
gi|195654367|gb|ACG46651.1| DNA polymerase I [Zea mays]
gi|413956435|gb|AFW89084.1| DNA polymerase I [Zea mays]
Length = 422
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/46 (82%), Positives = 42/46 (91%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A GM FRH LYP+YK+NR PTPDT+VQG+QYLKASIKAMSIKVIEV
Sbjct: 175 AKGMTFRHMLYPAYKSNRTPTPDTVVQGMQYLKASIKAMSIKVIEV 220
>gi|357113266|ref|XP_003558425.1| PREDICTED: DNA polymerase I-like [Brachypodium distachyon]
Length = 419
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/56 (75%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
A GM FRH LYP+YK+NR TPDTIVQG+QYLKASIKAMSIKVIEV V +DA G
Sbjct: 172 AKGMTFRHMLYPAYKSNRTSTPDTIVQGMQYLKASIKAMSIKVIEVPGVEADDAIG 227
>gi|226530274|ref|NP_001151880.1| DNA polymerase I [Zea mays]
gi|195650551|gb|ACG44743.1| DNA polymerase I [Zea mays]
Length = 422
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
A GM FRH LYP+YK+NR PTPDT+VQG+QYLKASIKAMSIKVIEV V +D G
Sbjct: 175 AKGMTFRHMLYPAYKSNRTPTPDTVVQGMQYLKASIKAMSIKVIEVPGVEADDVIG 230
>gi|224121808|ref|XP_002330658.1| predicted protein [Populus trichocarpa]
gi|222872262|gb|EEF09393.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 41/44 (93%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G+NFRHTLY YK+NRPPTPDT++QGL YLKA+IKAMS+KVIEV
Sbjct: 64 GLNFRHTLYSLYKSNRPPTPDTVIQGLPYLKAAIKAMSVKVIEV 107
>gi|449516928|ref|XP_004165498.1| PREDICTED: DNA polymerase I, thermostable-like [Cucumis sativus]
Length = 283
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/44 (81%), Positives = 41/44 (93%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G FRHT+YP+YK+NR PTPDT+VQGLQYLKASIK+MSIKVIEV
Sbjct: 20 GSTFRHTIYPAYKSNRAPTPDTVVQGLQYLKASIKSMSIKVIEV 63
>gi|449453197|ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sativus]
Length = 461
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/44 (81%), Positives = 41/44 (93%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G FRHT+YP+YK+NR PTPDT+VQGLQYLKASIK+MSIKVIEV
Sbjct: 215 GSTFRHTIYPAYKSNRAPTPDTVVQGLQYLKASIKSMSIKVIEV 258
>gi|148906869|gb|ABR16580.1| unknown [Picea sitchensis]
Length = 400
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/44 (72%), Positives = 39/44 (88%)
Query: 35 GACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKV 78
G+ G FRHTLYP+YK+NR PTPDTIVQ LQYLKA+++AMS+KV
Sbjct: 194 GSTGPTFRHTLYPAYKSNRMPTPDTIVQALQYLKAALQAMSVKV 237
>gi|302802031|ref|XP_002982771.1| hypothetical protein SELMODRAFT_54861 [Selaginella moellendorffii]
gi|300149361|gb|EFJ16016.1| hypothetical protein SELMODRAFT_54861 [Selaginella moellendorffii]
Length = 363
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 36/44 (81%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G+ FRHT++P YK NRPPTPDTI QGL +L+ ++ AM IKVIEV
Sbjct: 97 GLTFRHTMFPEYKKNRPPTPDTIYQGLDHLRPALVAMGIKVIEV 140
>gi|302818496|ref|XP_002990921.1| hypothetical protein SELMODRAFT_44782 [Selaginella moellendorffii]
gi|300141252|gb|EFJ07965.1| hypothetical protein SELMODRAFT_44782 [Selaginella moellendorffii]
Length = 363
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 36/44 (81%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G+ FRHT++P YK NRPPTPDTI QGL +L+ ++ AM IKVIEV
Sbjct: 97 GLTFRHTMFPEYKKNRPPTPDTIYQGLDHLRPALVAMGIKVIEV 140
>gi|168027127|ref|XP_001766082.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682725|gb|EDQ69141.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 310
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G+ FRH LYP+YK+ R PTPDT+ Q L LK ++ ++ I V+EV
Sbjct: 65 GLTFRHELYPAYKSGRAPTPDTVCQALSCLKPALLSLGISVVEV 108
>gi|354603286|ref|ZP_09021285.1| hypothetical protein HMPREF9450_00200 [Alistipes indistinctus YIT
12060]
gi|353349163|gb|EHB93429.1| hypothetical protein HMPREF9450_00200 [Alistipes indistinctus YIT
12060]
Length = 1094
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G NFRH +YP YK NR TP+ I+ + Y+K ++AM I VIEV
Sbjct: 109 GGNFRHEIYPQYKANREATPEDIIAAVPYIKRVLEAMRIPVIEV 152
>gi|221135267|ref|ZP_03561570.1| DNA polymerase I [Glaciecola sp. HTCC2999]
Length = 931
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FR +YP YK NRPP PD + + L A IKAM + ++E NV +D G
Sbjct: 61 VFDAKGKTFRDDIYPEYKANRPPMPDELRSQIAPLHAIIKAMGLPLIVEPNVEADDVIG 119
>gi|451947544|ref|YP_007468139.1| DNA polymerase I [Desulfocapsa sulfexigens DSM 10523]
gi|451906892|gb|AGF78486.1| DNA polymerase I [Desulfocapsa sulfexigens DSM 10523]
Length = 890
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
G FRH +YP YK NRPP PD + + Y+K + AM+I E+ + D
Sbjct: 62 GKVFRHEIYPEYKANRPPMPDDLAVQIPYIKELVHAMNIPCFEIEGIEAD 111
>gi|410446910|ref|ZP_11301012.1| DNA-directed DNA polymerase [SAR86 cluster bacterium SAR86E]
gi|409979897|gb|EKO36649.1| DNA-directed DNA polymerase [SAR86 cluster bacterium SAR86E]
Length = 899
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYED 87
++ A G NFRH +Y YK NRPP P+ + + L LK AM + VIE+ NV +D
Sbjct: 60 VFDAKGKNFRHDIYKEYKANRPPMPEDLREQLSPLKEICNAMGMPVIEIPNVEADD 115
>gi|350551678|ref|ZP_08920891.1| DNA polymerase I [Thiorhodospira sibirica ATCC 700588]
gi|349796816|gb|EGZ50599.1| DNA polymerase I [Thiorhodospira sibirica ATCC 700588]
Length = 928
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
++ A G NFRH+LYP YK RPP PD +V + L+ I AM +
Sbjct: 62 IFDAKGKNFRHSLYPDYKAQRPPMPDELVAQIAPLQEVIDAMGL 105
>gi|90581061|ref|ZP_01236861.1| DNA polymerase I [Photobacterium angustum S14]
gi|90437757|gb|EAS62948.1| DNA polymerase I [Vibrio angustum S14]
Length = 923
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK NRPP PD + ++ L A IKAM + +I ++ + D
Sbjct: 61 IFDAKGKTFRDDMYPEYKANRPPMPDDLRSQIEPLHAVIKAMGLPLIAISGVEAD 115
>gi|89074464|ref|ZP_01160941.1| DNA polymerase I [Photobacterium sp. SKA34]
gi|89049752|gb|EAR55302.1| DNA polymerase I [Photobacterium sp. SKA34]
Length = 923
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK NRPP PD + ++ L A IKAM + +I ++ + D
Sbjct: 61 IFDAKGKTFRDDMYPEYKANRPPMPDDLRSQIEPLHAVIKAMGLPLIAISGVEAD 115
>gi|310687606|dbj|BAJ23222.1| DNA dependent DNA polymerase [Thermotoga petrophila]
Length = 893
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FRH L +YK RP TPD ++Q L Y+K ++A+ +KV+EV
Sbjct: 68 FRHKLLETYKAQRPKTPDLLIQQLPYIKKLVEALGMKVLEV 108
>gi|170289072|ref|YP_001739310.1| DNA polymerase I [Thermotoga sp. RQ2]
gi|170176575|gb|ACB09627.1| DNA polymerase I [Thermotoga sp. RQ2]
Length = 893
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FRH L +YK RP TPD ++Q L Y+K ++A+ +KV+EV
Sbjct: 68 FRHKLLETYKAQRPKTPDLLIQQLPYIKKLVEALGMKVLEV 108
>gi|403253516|ref|ZP_10919817.1| DNA polymerase I [Thermotoga sp. EMP]
gi|402811050|gb|EJX25538.1| DNA polymerase I [Thermotoga sp. EMP]
Length = 893
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FRH L +YK RP TPD ++Q L Y+K ++A+ +KV+EV
Sbjct: 68 FRHKLLETYKAQRPKTPDLLIQQLPYIKKLVEALGMKVLEV 108
>gi|15644367|ref|NP_229419.1| DNA-directed DNA polymerase I [Thermotoga maritima MSB8]
gi|418045679|ref|ZP_12683774.1| DNA polymerase I [Thermotoga maritima MSB8]
gi|4982191|gb|AAD36686.1|AE001805_11 DNA-directed DNA polymerase I [Thermotoga maritima MSB8]
gi|351676564|gb|EHA59717.1| DNA polymerase I [Thermotoga maritima MSB8]
Length = 893
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FRH L +YK RP TPD ++Q L Y+K ++A+ +KV+EV
Sbjct: 68 FRHKLLETYKAQRPKTPDLLIQQLPYIKKLVEALGMKVLEV 108
>gi|404379564|ref|ZP_10984620.1| DNA polymerase I [Simonsiella muelleri ATCC 29453]
gi|404294620|gb|EFG30551.2| DNA polymerase I [Simonsiella muelleri ATCC 29453]
Length = 916
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G NFRH L+P YK RPP PD + + L ++ M KV+++N + D
Sbjct: 56 VFDAKGKNFRHALFPDYKATRPPMPDDLRPQAEMLPELVELMGWKVLKINDVEAD 110
>gi|90414265|ref|ZP_01222245.1| DNA polymerase I [Photobacterium profundum 3TCK]
gi|90324712|gb|EAS41253.1| DNA polymerase I [Photobacterium profundum 3TCK]
Length = 922
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK NRPP PD + ++ L A IKAM + +I ++ + D
Sbjct: 61 IFDAKGKTFRDDIYPEYKANRPPMPDDLRGQIEPLHAVIKAMGLPLIAISGVEAD 115
>gi|54310556|ref|YP_131576.1| DNA polymerase I [Photobacterium profundum SS9]
gi|46914999|emb|CAG21774.1| putative DNA polymerase I [Photobacterium profundum SS9]
Length = 937
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK NRPP PD + ++ L A IKAM + +I ++ + D
Sbjct: 76 IFDAKGKTFRDDIYPEYKANRPPMPDDLRGQIEPLHAVIKAMGLPLIAISGVEAD 130
>gi|281412608|ref|YP_003346687.1| DNA polymerase I [Thermotoga naphthophila RKU-10]
gi|281373711|gb|ADA67273.1| DNA polymerase I [Thermotoga naphthophila RKU-10]
Length = 893
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FRH L +YK RP TPD ++Q L Y+K ++A+ +KV+E+
Sbjct: 68 FRHKLLETYKAQRPKTPDLLIQQLPYIKRLVEALGMKVLEI 108
>gi|148270302|ref|YP_001244762.1| DNA polymerase I [Thermotoga petrophila RKU-1]
gi|147735846|gb|ABQ47186.1| DNA polymerase I [Thermotoga petrophila RKU-1]
Length = 893
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FRH L +YK RP TPD ++Q L Y+K ++A+ +KV+E+
Sbjct: 68 FRHKLLETYKAQRPKTPDLLIQQLPYIKRLVEALGMKVLEI 108
>gi|345871043|ref|ZP_08822992.1| DNA polymerase I [Thiorhodococcus drewsii AZ1]
gi|343921197|gb|EGV31921.1| DNA polymerase I [Thiorhodococcus drewsii AZ1]
Length = 900
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G NFR+ LYP YK +RPP P+ + + +Q L+ I+AM + ++ + V +D G
Sbjct: 59 IFDAAGKNFRNDLYPDYKAHRPPMPEDLREQIQPLQDIIRAMGLPLLVIPEVEADDVIG 117
>gi|410634866|ref|ZP_11345493.1| DNA polymerase I [Glaciecola lipolytica E3]
gi|410145610|dbj|GAC12698.1| DNA polymerase I [Glaciecola lipolytica E3]
Length = 926
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FR +YP YK NRPP PD + + L A IKAM + ++E V +D G
Sbjct: 61 IFDAKGKTFRDDIYPEYKANRPPMPDELRSQIAPLHAIIKAMGLPLIVEEGVEADDVIG 119
>gi|407681925|ref|YP_006797099.1| DNA polymerase I [Alteromonas macleodii str. 'English Channel 673']
gi|407243536|gb|AFT72722.1| DNA polymerase I [Alteromonas macleodii str. 'English Channel 673']
Length = 930
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR +Y YK NRPP PD + ++ L A IKAM + VI E V +D G
Sbjct: 61 IFDAKGKTFRDDIYKEYKANRPPMPDELRSQIEPLHAIIKAMGLPVIVESGVEADDVIG 119
>gi|406595017|ref|YP_006746147.1| DNA polymerase I [Alteromonas macleodii ATCC 27126]
gi|406372338|gb|AFS35593.1| DNA polymerase I [Alteromonas macleodii ATCC 27126]
Length = 930
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR +Y YK NRPP PD + ++ L A IKAM + VI E V +D G
Sbjct: 61 IFDAKGKTFRDDIYKEYKANRPPMPDELRSQIEPLHAIIKAMGLPVIVESGVEADDVIG 119
>gi|222099813|ref|YP_002534381.1| DNA-directed DNA polymerase I [Thermotoga neapolitana DSM 4359]
gi|221572203|gb|ACM23015.1| DNA-directed DNA polymerase I [Thermotoga neapolitana DSM 4359]
Length = 893
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FRH L +YK RP TPD +VQ L Y+K I+A+ KV+E+
Sbjct: 68 FRHKLLEAYKAQRPKTPDLLVQQLPYIKRLIEALGFKVLEL 108
>gi|330444881|ref|ZP_08308536.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489191|dbj|GAA03033.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 923
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++P YK NRPP PD + ++ L A IKAM + +I ++ + D
Sbjct: 61 IFDAKGKTFRDDMFPEYKANRPPMPDDLRGQIEPLHAVIKAMGLPLISISGVEAD 115
>gi|68171574|ref|ZP_00544948.1| DNA polymerase A [Ehrlichia chaffeensis str. Sapulpa]
gi|88658019|ref|YP_506910.1| DNA polymerase I [Ehrlichia chaffeensis str. Arkansas]
gi|67999000|gb|EAM85677.1| DNA polymerase A [Ehrlichia chaffeensis str. Sapulpa]
gi|88599476|gb|ABD44945.1| DNA polymerase I [Ehrlichia chaffeensis str. Arkansas]
Length = 944
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 1 MGESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
+G YG + FL Y +H +TD + V D NFRH +YP YK NRP PD +
Sbjct: 31 IGGVYGFI-NIFLKYIEKH---VTDYLVVVFD---TGSKNFRHNIYPEYKGNRPKLPDDL 83
Query: 61 VQGLQYLKASIKAMSIKVIEVNVMYE 86
+ L+ ++ A +I EV V YE
Sbjct: 84 IPQFSLLREAVNAFNIASEEV-VGYE 108
>gi|441506550|ref|ZP_20988518.1| DNA polymerase I [Photobacterium sp. AK15]
gi|441425756|gb|ELR63250.1| DNA polymerase I [Photobacterium sp. AK15]
Length = 923
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK +RPP PD + ++ L A IKAM + +I V+ + D
Sbjct: 61 IFDAKGKTFRDEIYPEYKAHRPPMPDDLRGQIEPLHAVIKAMGLPLISVSGVEAD 115
>gi|94264033|ref|ZP_01287833.1| DNA polymerase A [delta proteobacterium MLMS-1]
gi|93455544|gb|EAT05731.1| DNA polymerase A [delta proteobacterium MLMS-1]
Length = 910
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
++ A G NFRH LYP YK NRP P+ + L Y+K + A I +E
Sbjct: 59 VFDARGPNFRHQLYPQYKANRPAMPEDLACQLPYIKEIVAAYRITSLE 106
>gi|146329645|ref|YP_001209132.1| DNA polymerase I [Dichelobacter nodosus VCS1703A]
gi|146233115|gb|ABQ14093.1| DNA polymerase I [Dichelobacter nodosus VCS1703A]
Length = 901
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FRH +YP YK NRPP P+ + +Q L I A+ +I E V +D G
Sbjct: 60 VFDAAGKTFRHQIYPDYKANRPPMPEDLAVQIQPLHQLITALGFPLIMESGVEADDVIG 118
>gi|209693839|ref|YP_002261767.1| DNA polymerase I [Aliivibrio salmonicida LFI1238]
gi|208007790|emb|CAQ77912.1| DNA polymerase I [Aliivibrio salmonicida LFI1238]
Length = 934
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +YP YK NRPP PD + ++ L IKAM + +I ++ + D
Sbjct: 61 IFDAKGKTFRNDMYPEYKANRPPMPDELRCQIEPLHKLIKAMGLPLISISGVEAD 115
>gi|337287066|ref|YP_004626539.1| DNA polymerase I [Thermodesulfatator indicus DSM 15286]
gi|335359894|gb|AEH45575.1| DNA polymerase I [Thermodesulfatator indicus DSM 15286]
Length = 903
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 34 YGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
+ A G FRH +Y YK NRPP PD + + Y+K +A + ++E+
Sbjct: 74 FDAKGPTFRHEMYKEYKANRPPMPDDLSVQIPYIKEVTRAFGVPILEI 121
>gi|431931900|ref|YP_007244946.1| DNA polymerase I [Thioflavicoccus mobilis 8321]
gi|431830203|gb|AGA91316.1| DNA polymerase I [Thioflavicoccus mobilis 8321]
Length = 894
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR LYP YK NRPP PD + + ++ L I+AM + ++ V +V +D G
Sbjct: 59 VFDAPGKTFRDDLYPKYKANRPPLPDDLREQIEPLLTVIRAMGLPLVVVPDVEADDVIG 117
>gi|422349819|ref|ZP_16430708.1| DNA polymerase I [Sutterella wadsworthensis 2_1_59BFAA]
gi|404658028|gb|EKB30908.1| DNA polymerase I [Sutterella wadsworthensis 2_1_59BFAA]
Length = 947
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G NFRH ++P YK+NRPP PD + ++ L +K + V+ V
Sbjct: 56 IFDAQGKNFRHEMFPEYKSNRPPMPDDLRVQIEPLHGILKDLGWPVVSV 104
>gi|157363023|ref|YP_001469790.1| DNA polymerase I [Thermotoga lettingae TMO]
gi|157313627|gb|ABV32726.1| DNA polymerase I [Thermotoga lettingae TMO]
Length = 892
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+RH L YK +RP TPD ++Q L Y+K ++A+ IKV+E
Sbjct: 67 YRHELLEEYKAHRPQTPDAMIQQLPYIKRGVQALGIKVLE 106
>gi|91206022|ref|YP_538377.1| DNA polymerase I [Rickettsia bellii RML369-C]
gi|157826616|ref|YP_001495680.1| DNA polymerase I [Rickettsia bellii OSU 85-389]
gi|123388086|sp|Q1RH76.1|DPO1_RICBR RecName: Full=DNA polymerase I; Short=POL I
gi|91069566|gb|ABE05288.1| DNA polymerase I [Rickettsia bellii RML369-C]
gi|157801920|gb|ABV78643.1| DNA polymerase I [Rickettsia bellii OSU 85-389]
Length = 871
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ + ++ ++E N
Sbjct: 59 VFDSGGKNFRHEIYPEYKANRPPPPEDLIAQLPLVRDVARNLNFPILEKN 108
>gi|407685815|ref|YP_006800988.1| DNA polymerase I [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407289195|gb|AFT93507.1| DNA polymerase I [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 930
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR +Y YK NRPP PD + ++ L A IKAM + VI E V +D G
Sbjct: 61 IFDAKGKTFRDDIYKEYKANRPPMPDELRSQIEPLHAIIKAMGLPVIVESGVEADDVIG 119
>gi|394990045|ref|ZP_10382877.1| DNA polymerase I [Sulfuricella denitrificans skB26]
gi|393790310|dbj|GAB72516.1| DNA polymerase I [Sulfuricella denitrificans skB26]
Length = 906
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 19 HDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKV 78
H Y D + V D A G FR LYP YK +RPP PD + + ++ L +I+AM +
Sbjct: 47 HKDYNADYSACVFD---AKGKTFRDDLYPEYKAHRPPMPDDLARQIEPLHEAIRAMGWPL 103
Query: 79 IEVNVMYED 87
+ V+ + D
Sbjct: 104 LMVDGVEAD 112
>gi|257092739|ref|YP_003166380.1| DNA polymerase I [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257045263|gb|ACV34451.1| DNA polymerase I [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 922
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR YP YK NRPP PD +V+ ++ L A+I A+ ++ ++ + D
Sbjct: 59 IFDAKGKTFRDDWYPEYKANRPPMPDDMVRQIEPLNAAIAALGWPLLSIDGVEAD 113
>gi|381150379|ref|ZP_09862248.1| DNA polymerase I [Methylomicrobium album BG8]
gi|380882351|gb|EIC28228.1| DNA polymerase I [Methylomicrobium album BG8]
Length = 901
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G NFRH LY YK +RPP PD + ++ L +KAM + +IE + +D G
Sbjct: 59 VFDAPGNNFRHDLYEHYKAHRPPMPDDLRCQIEPLHRMVKAMGLPLIIEAGIEADDVLG 117
>gi|390948708|ref|YP_006412467.1| DNA polymerase I [Thiocystis violascens DSM 198]
gi|390425277|gb|AFL72342.1| DNA polymerase I [Thiocystis violascens DSM 198]
Length = 907
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G +FR+ LYP+YK +RPP P+ + + +Q L+ I+AM + ++ + V +D G
Sbjct: 59 VFDAAGKSFRNDLYPAYKAHRPPMPEDLREQIQPLQEVIRAMGLPLLVIPEVEADDVIG 117
>gi|71905805|ref|YP_283392.1| DNA polymerase A [Dechloromonas aromatica RCB]
gi|71845426|gb|AAZ44922.1| DNA polymerase A [Dechloromonas aromatica RCB]
Length = 906
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR YP YK +RPP PD +VQ ++ L A+IKA ++ V+ + D
Sbjct: 56 VFDAKGKTFRDDWYPEYKAHRPPMPDDLVQQIEPLHAAIKAAGWPLLMVDGVEAD 110
>gi|407698276|ref|YP_006823063.1| DNA polymerase I [Alteromonas macleodii str. 'Black Sea 11']
gi|407247423|gb|AFT76608.1| DNA polymerase I [Alteromonas macleodii str. 'Black Sea 11']
Length = 929
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR +Y YK NRPP PD + ++ L A IKAM + VI E V +D G
Sbjct: 61 IFDAKGKTFRDDIYKEYKANRPPMPDELRSQIEPLHAIIKAMGLPVIVEPGVEADDVIG 119
>gi|37678370|ref|NP_932979.1| DNA polymerase I [Vibrio vulnificus YJ016]
gi|37197109|dbj|BAC92950.1| DNA polymerase I [Vibrio vulnificus YJ016]
Length = 957
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN-VMYEDAYG 90
++ A G FR +YP YK NRPP PD + ++ L IKAM + +I + V +D G
Sbjct: 87 VFDAKGKTFRDDMYPEYKANRPPMPDELRCQIEPLHQVIKAMGLPLIAIEGVEADDVIG 145
>gi|256823707|ref|YP_003147670.1| DNA polymerase I [Kangiella koreensis DSM 16069]
gi|256797246|gb|ACV27902.1| DNA polymerase I [Kangiella koreensis DSM 16069]
Length = 915
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ LYP YK NRPP P+ + Q ++ + +KAM + ++ ++ + D
Sbjct: 62 VFDAKGKTFRNDLYPEYKANRPPMPEDLRQQIEPIHEIVKAMGLPLLVIDGVEAD 116
>gi|73666681|ref|YP_302697.1| DNA polymerase I [Ehrlichia canis str. Jake]
gi|72393822|gb|AAZ68099.1| DNA polymerase, family A [Ehrlichia canis str. Jake]
Length = 861
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 1 MGESYGLLWRG-------FLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNR 53
+ SYGL G FL Y +H T + D NFRH +YP YK+NR
Sbjct: 23 LSTSYGLPIGGVYGFINIFLKYIEKHSTDYLVVVFDTGS------KNFRHDIYPEYKSNR 76
Query: 54 PPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYE 86
P P+ ++ L+ ++ A +I EV + YE
Sbjct: 77 PKLPNDLISQFSLLREAVSAFNIASEEV-IGYE 108
>gi|59710681|ref|YP_203457.1| DNA polymerase I [Vibrio fischeri ES114]
gi|59478782|gb|AAW84569.1| fused DNA polymerase I 5'->3' exonuclease/3'->5' polymerase/3'->5'
exonuclease [Vibrio fischeri ES114]
Length = 932
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR+ +YP YK NRPP PD + ++ L IKAM + ++ +
Sbjct: 61 IFDAKGKTFRNDMYPEYKANRPPMPDDLRCQIEPLHKLIKAMGLPLVSI 109
>gi|323144953|ref|ZP_08079513.1| DNA-directed DNA polymerase [Succinatimonas hippei YIT 12066]
gi|322415232|gb|EFY06006.1| DNA-directed DNA polymerase [Succinatimonas hippei YIT 12066]
Length = 940
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G +FR LYP YK+NRPP P+ + + Y+ +KAM + +I V V +D G
Sbjct: 60 VFDAKGKSFRSDLYPEYKSNRPPMPEDLRIQVDYVHRIVKAMGLPLIIVPKVEADDVLG 118
>gi|423684810|ref|ZP_17659618.1| DNA polymerase I [Vibrio fischeri SR5]
gi|371495857|gb|EHN71451.1| DNA polymerase I [Vibrio fischeri SR5]
Length = 932
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR+ +YP YK NRPP PD + ++ L IKAM + ++ +
Sbjct: 61 IFDAKGKTFRNDMYPEYKANRPPMPDDLRCQIEPLHKLIKAMGLPLVSI 109
>gi|197334225|ref|YP_002154843.1| DNA polymerase I [Vibrio fischeri MJ11]
gi|197315715|gb|ACH65162.1| DNA polymerase I [Vibrio fischeri MJ11]
Length = 932
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR+ +YP YK NRPP PD + ++ L IKAM + ++ +
Sbjct: 61 IFDAKGKTFRNDMYPEYKANRPPMPDDLRCQIEPLHKLIKAMGLPLVSI 109
>gi|392410913|ref|YP_006447520.1| DNA polymerase I [Desulfomonile tiedjei DSM 6799]
gi|390624049|gb|AFM25256.1| DNA polymerase I [Desulfomonile tiedjei DSM 6799]
Length = 888
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G NFR+ +YP+YK NRPPTPD + + + ++A I I V
Sbjct: 60 IFDAKGPNFRYEIYPAYKANRPPTPDDLQIQIPRIHEIVEAYRIPSISV 108
>gi|239946695|ref|ZP_04698448.1| DNA polymerase I family protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239920971|gb|EER20995.1| DNA polymerase I family protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 875
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ +++ ++E N
Sbjct: 59 VFDSGGENFRHHIYPEYKANRPPPPEDLIVQLPLVRDVASSLNFPILEKN 108
>gi|417956892|ref|ZP_12599826.1| DNA polymerase I [Neisseria weaveri ATCC 51223]
gi|343969638|gb|EGV37848.1| DNA polymerase I [Neisseria weaveri ATCC 51223]
Length = 907
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH +YP YK RPP PD + + L ++ M V+ V +V
Sbjct: 30 VHDYCAVVFDAKGENFRHKMYPDYKATRPPMPDELRPQAEMLPEMVRLMGWPVLIVPDVE 89
Query: 85 YEDAYG 90
+D G
Sbjct: 90 ADDVIG 95
>gi|238022872|ref|ZP_04603298.1| hypothetical protein GCWU000324_02793 [Kingella oralis ATCC 51147]
gi|237865680|gb|EEP66818.1| hypothetical protein GCWU000324_02793 [Kingella oralis ATCC 51147]
Length = 930
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 31 HDLYGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
HD Y AC G NFRH L+P YK RPP PD + L ++ M KV+++ +V
Sbjct: 57 HD-YCACVFDAKGKNFRHALFPDYKATRPPMPDDLRPQADMLPDLVELMGWKVLKISDVE 115
Query: 85 YEDAYG 90
+D G
Sbjct: 116 ADDVIG 121
>gi|219815948|gb|ACL37073.1| DNA polymerase I [uncultured bacterium]
Length = 944
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FRH Y +YK NRP P+ I G+ Y+K +KAM+I ++++
Sbjct: 66 FRHIEYTAYKANRPTQPEGITAGIPYIKMLLKAMNIPILQL 106
>gi|157826228|ref|YP_001493948.1| DNA polymerase I [Rickettsia akari str. Hartford]
gi|157800186|gb|ABV75440.1| DNA polymerase I [Rickettsia akari str. Hartford]
Length = 872
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ +V L ++ +++ ++E N
Sbjct: 59 VFDSGGNNFRHHIYPEYKANRPPPPEDLVVQLPLVRDVASNLNLPILEKN 108
>gi|157804146|ref|YP_001492695.1| DNA polymerase I [Rickettsia canadensis str. McKiel]
gi|157785409|gb|ABV73910.1| DNA polymerase I [Rickettsia canadensis str. McKiel]
Length = 875
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ +++ ++E N
Sbjct: 59 VFDSGGKNFRHHIYPEYKANRPPPPEDLIIQLPLVRDVASSLNFPILEKN 108
>gi|379023291|ref|YP_005299952.1| DNA polymerase I [Rickettsia canadensis str. CA410]
gi|376324229|gb|AFB21470.1| DNA polymerase I [Rickettsia canadensis str. CA410]
Length = 875
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ +++ ++E N
Sbjct: 59 VFDSGGKNFRHHIYPEYKANRPPPPEDLIIQLPLVRDVASSLNFPILEKN 108
>gi|383501239|ref|YP_005414598.1| DNA polymerase I [Rickettsia australis str. Cutlack]
gi|378932250|gb|AFC70755.1| DNA polymerase I [Rickettsia australis str. Cutlack]
Length = 872
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ +V L ++ +++ ++E N
Sbjct: 59 VFDSGGNNFRHHIYPEYKANRPPPPEDLVVQLPLVRDVASNLNLPILEKN 108
>gi|255003568|ref|ZP_05278532.1| DNA polymerase I [Anaplasma marginale str. Puerto Rico]
gi|255004694|ref|ZP_05279495.1| DNA polymerase I [Anaplasma marginale str. Virginia]
Length = 853
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 40 NFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
NFRHTLYP YK NRP P+ +++ L+ ++ A+ I EV+
Sbjct: 66 NFRHTLYPQYKMNRPRLPEDLLRQFSPLREAVSALGIASEEVH 108
>gi|254995381|ref|ZP_05277571.1| DNA polymerase I [Anaplasma marginale str. Mississippi]
Length = 850
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 40 NFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
NFRHTLYP YK NRP P+ +++ L+ ++ A+ I EV+
Sbjct: 63 NFRHTLYPQYKMNRPRLPEDLLRQFSPLREAVSALGIASEEVH 105
>gi|167945527|ref|ZP_02532601.1| DNA polymerase I [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 110
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G +FR+ LYP YK NRPP P+ + Q ++ L ++AM + ++ + V +D G
Sbjct: 19 VFDAPGGSFRNQLYPDYKANRPPMPEELRQQIEPLHQIVRAMGLPLLMIPGVEADDVIG 77
>gi|345864936|ref|ZP_08817131.1| DNA polymerase I [endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345124016|gb|EGW53901.1| DNA polymerase I [endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 899
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G +FR+ LYP YK NRPP P+ + Q ++ L ++AM + ++ +
Sbjct: 59 VFDAPGGSFRNQLYPDYKANRPPMPEELRQQIEPLHQIVRAMGLPLLMI 107
>gi|222475578|ref|YP_002563995.1| DNA polymerase I [Anaplasma marginale str. Florida]
gi|222419716|gb|ACM49739.1| DNA polymerase I (polA) [Anaplasma marginale str. Florida]
Length = 864
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 40 NFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
NFRHTLYP YK NRP P+ +++ L+ ++ A+ I EV+ D
Sbjct: 77 NFRHTLYPQYKMNRPRLPEDLLRQFSPLREAVSALGIASEEVHNFEAD 124
>gi|297569901|ref|YP_003691245.1| DNA polymerase I [Desulfurivibrio alkaliphilus AHT2]
gi|296925816|gb|ADH86626.1| DNA polymerase I [Desulfurivibrio alkaliphilus AHT2]
Length = 914
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 34 YGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
Y + G NFRH +YP+YK NRP P + + Y+K + A I +E
Sbjct: 60 YDSKGPNFRHEIYPAYKANRPEMPADLACQIPYIKEVVSAYHITTLE 106
>gi|56417214|ref|YP_154288.1| DNA polymerase I [Anaplasma marginale str. St. Maries]
gi|56388446|gb|AAV87033.1| DNA polymerase [Anaplasma marginale str. St. Maries]
Length = 864
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 40 NFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
NFRHTLYP YK NRP P+ +++ L+ ++ A+ I EV+
Sbjct: 77 NFRHTLYPQYKMNRPRLPEDLLRQFSPLREAVSALGIASEEVH 119
>gi|320157741|ref|YP_004190120.1| DNA polymerase I [Vibrio vulnificus MO6-24/O]
gi|319933053|gb|ADV87917.1| DNA polymerase I [Vibrio vulnificus MO6-24/O]
Length = 931
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK NRPP PD + ++ L IKAM + +I + + D
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHQVIKAMGLPLIAIEGVEAD 115
>gi|27364348|ref|NP_759876.1| DNA polymerase I [Vibrio vulnificus CMCP6]
gi|27360467|gb|AAO09403.1| DNA polymerase I [Vibrio vulnificus CMCP6]
Length = 931
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK NRPP PD + ++ L IKAM + +I + + D
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHQVIKAMGLPLIAIEGVEAD 115
>gi|389578957|ref|ZP_10168984.1| DNA polymerase I [Desulfobacter postgatei 2ac9]
gi|389400592|gb|EIM62814.1| DNA polymerase I [Desulfobacter postgatei 2ac9]
Length = 896
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
G FRH ++ YK NRPP P+ + + +KA IKA++I +IE
Sbjct: 64 GPTFRHKMFDEYKANRPPMPEELAIQIPDIKAIIKALNIPIIE 106
>gi|350570591|ref|ZP_08938943.1| DNA-directed DNA polymerase I [Neisseria wadsworthii 9715]
gi|349795793|gb|EGZ49587.1| DNA-directed DNA polymerase I [Neisseria wadsworthii 9715]
Length = 928
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH +YP YK RPP PD + + L ++ M V+ V +V
Sbjct: 51 VHDYCAVVFDAKGENFRHKMYPDYKATRPPMPDELRPQAEMLPEMVRLMGWPVLIVPDVE 110
Query: 85 YEDAYG 90
+D G
Sbjct: 111 ADDVIG 116
>gi|167753813|ref|ZP_02425940.1| hypothetical protein ALIPUT_02098 [Alistipes putredinis DSM 17216]
gi|167658438|gb|EDS02568.1| DNA-directed DNA polymerase [Alistipes putredinis DSM 17216]
Length = 959
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 22 YMTDITLDVH-DLYGAC----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
++ DI H DL G G +FR ++P YK NR TP+ I+ + Y+K ++AM I
Sbjct: 42 FLRDIQKREHPDLLGVAFDPKGGSFRREIFPEYKANRAETPEDILLSVPYVKRIVEAMCI 101
Query: 77 KVIEV 81
V+EV
Sbjct: 102 PVLEV 106
>gi|67459631|ref|YP_247255.1| DNA polymerase I [Rickettsia felis URRWXCal2]
gi|14916559|sp|Q9RAA9.1|DPO1_RICFE RecName: Full=DNA polymerase I; Short=POL I
gi|5912337|emb|CAB56067.1| DNA polymerase I [Rickettsia felis]
gi|67005164|gb|AAY62090.1| DNA polymerase I (POL I) [Rickettsia felis URRWXCal2]
Length = 922
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ +V L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHHIYPEYKANRPPPPEDLVVQLPLVRDVASNLNFPILEKN 108
>gi|224368350|ref|YP_002602513.1| protein PolA [Desulfobacterium autotrophicum HRM2]
gi|223691066|gb|ACN14349.1| PolA [Desulfobacterium autotrophicum HRM2]
Length = 891
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
G FR+ ++ +YK NRPP PD + + Y+K +KA++I ++E
Sbjct: 62 GPTFRNAMFDAYKANRPPMPDDLRLQIPYIKEVVKALNIPIVE 104
>gi|387773168|ref|ZP_10128763.1| DNA-directed DNA polymerase [Haemophilus parahaemolyticus HK385]
gi|386905208|gb|EIJ69979.1| DNA-directed DNA polymerase [Haemophilus parahaemolyticus HK385]
Length = 950
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L A IKA+ I +I V + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDELRSQIQPLHAIIKALGIPLISVEGVEAD 115
>gi|386390037|ref|ZP_10074834.1| DNA-directed DNA polymerase [Haemophilus paraphrohaemolyticus
HK411]
gi|385694079|gb|EIG24705.1| DNA-directed DNA polymerase [Haemophilus paraphrohaemolyticus
HK411]
Length = 950
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L A IKA+ I +I V + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDELRSQIQPLHAIIKALGIPLISVEGVEAD 115
>gi|343510744|ref|ZP_08747955.1| DNA polymerase I [Vibrio scophthalmi LMG 19158]
gi|343516251|ref|ZP_08753292.1| DNA polymerase I [Vibrio sp. N418]
gi|342796671|gb|EGU32344.1| DNA polymerase I [Vibrio sp. N418]
gi|342800959|gb|EGU36453.1| DNA polymerase I [Vibrio scophthalmi LMG 19158]
Length = 933
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I ++ + D
Sbjct: 61 IFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISISGVEAD 115
>gi|343506692|ref|ZP_08744163.1| DNA polymerase I [Vibrio ichthyoenteri ATCC 700023]
gi|342801915|gb|EGU37367.1| DNA polymerase I [Vibrio ichthyoenteri ATCC 700023]
Length = 933
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I ++ + D
Sbjct: 61 IFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISISGVEAD 115
>gi|365920203|ref|ZP_09444552.1| DNA-directed DNA polymerase [Cardiobacterium valvarum F0432]
gi|364578420|gb|EHM55625.1| DNA-directed DNA polymerase [Cardiobacterium valvarum F0432]
Length = 900
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FRH LYP+YK +RPP PD + ++ L I+A+ +IE V +D G
Sbjct: 62 VFDAQGKTFRHDLYPAYKAHRPPMPDDLRAQIEPLHRLIEALGFPLIIEDGVEADDVIG 120
>gi|149189881|ref|ZP_01868161.1| DNA polymerase I [Vibrio shilonii AK1]
gi|148836367|gb|EDL53324.1| DNA polymerase I [Vibrio shilonii AK1]
Length = 932
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +YP YK NRPP PD + ++ L IKAM + +I V
Sbjct: 61 VFDAKGKTFRDNMYPEYKANRPPMPDDLRCQIEPLHNVIKAMGLPLICV 109
>gi|258543756|ref|ZP_05703990.1| DNA polymerase I [Cardiobacterium hominis ATCC 15826]
gi|258520992|gb|EEV89851.1| DNA polymerase I [Cardiobacterium hominis ATCC 15826]
Length = 881
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FRH LYP+YK +RPP PD + ++ L I+A+ +IE V +D G
Sbjct: 17 VFDAKGKTFRHDLYPAYKAHRPPMPDDLRVQIEPLHRLIEALGFPLIIEPGVEADDVIG 75
>gi|349574759|ref|ZP_08886693.1| DNA-directed DNA polymerase I [Neisseria shayeganii 871]
gi|348013633|gb|EGY52543.1| DNA-directed DNA polymerase I [Neisseria shayeganii 871]
Length = 941
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH +YP YK RPP PD + + L ++ M V+ V +V
Sbjct: 52 VHDYCAVVFDAKGENFRHKMYPDYKATRPPMPDELRPQAEMLPELVRLMGWPVLIVPDVE 111
Query: 85 YEDAYG 90
+D G
Sbjct: 112 ADDVIG 117
>gi|424863848|ref|ZP_18287760.1| DNA-directed DNA polymerase [SAR86 cluster bacterium SAR86A]
gi|400757169|gb|EJP71381.1| DNA-directed DNA polymerase [SAR86 cluster bacterium SAR86A]
Length = 890
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 16 NIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMS 75
N++ D+ + I + ++ A G FR+ +Y YK NRPP PD + LQ +K+ KA+
Sbjct: 44 NLKKDSEGSPIIV----VFDAKGKTFRNDIYSEYKANRPPMPDELRLQLQPVKSICKAIG 99
Query: 76 IKVIEVNVMYED 87
+IE+ + D
Sbjct: 100 FPLIEIEGVEAD 111
>gi|350273909|ref|YP_004885222.1| DNA polymerase I [Rickettsia japonica YH]
gi|348593122|dbj|BAK97083.1| DNA polymerase I [Rickettsia japonica YH]
Length = 875
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIVQLPLVRDVASNLNFPILEKN 108
>gi|379712917|ref|YP_005301256.1| DNA polymerase I [Rickettsia philipii str. 364D]
gi|376329562|gb|AFB26799.1| DNA polymerase I [Rickettsia philipii str. 364D]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIVQLPLVRDVASNLNFPILEKN 108
>gi|378721846|ref|YP_005286733.1| DNA polymerase I [Rickettsia rickettsii str. Colombia]
gi|376326870|gb|AFB24109.1| DNA polymerase I [Rickettsia rickettsii str. Colombia]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIVQLPLVRDVASNLNFPILEKN 108
>gi|157829037|ref|YP_001495279.1| DNA polymerase I [Rickettsia rickettsii str. 'Sheila Smith']
gi|165933761|ref|YP_001650550.1| DNA polymerase I [Rickettsia rickettsii str. Iowa]
gi|378723191|ref|YP_005288077.1| DNA polymerase I [Rickettsia rickettsii str. Arizona]
gi|378724545|ref|YP_005289429.1| DNA polymerase I [Rickettsia rickettsii str. Hauke]
gi|379015908|ref|YP_005292143.1| DNA polymerase I [Rickettsia rickettsii str. Brazil]
gi|379018331|ref|YP_005294566.1| DNA polymerase I [Rickettsia rickettsii str. Hino]
gi|5912316|emb|CAB56098.1| DNA polymerase I [Rickettsia rickettsii]
gi|157801518|gb|ABV76771.1| DNA polymerase I [Rickettsia rickettsii str. 'Sheila Smith']
gi|165908848|gb|ABY73144.1| DNA polymerase I [Rickettsia rickettsii str. Iowa]
gi|376324432|gb|AFB21672.1| DNA polymerase I [Rickettsia rickettsii str. Brazil]
gi|376328215|gb|AFB25453.1| DNA polymerase I [Rickettsia rickettsii str. Arizona]
gi|376330897|gb|AFB28133.1| DNA polymerase I [Rickettsia rickettsii str. Hino]
gi|376333560|gb|AFB30793.1| DNA polymerase I [Rickettsia rickettsii str. Hauke]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIVQLPLVRDVASNLNFPILEKN 108
>gi|383313124|ref|YP_005365925.1| DNA polymerase I [Candidatus Rickettsia amblyommii str. GAT-30V]
gi|378931784|gb|AFC70293.1| DNA polymerase I [Candidatus Rickettsia amblyommii str. GAT-30V]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIVQLPLVRDVASNLNFPILEKN 108
>gi|379713403|ref|YP_005301741.1| DNA polymerase I [Rickettsia massiliae str. AZT80]
gi|376334049|gb|AFB31281.1| DNA polymerase I [Rickettsia massiliae str. AZT80]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIVQLPLVRDVASNLNFPILEKN 108
>gi|379019646|ref|YP_005295880.1| DNA polymerase I [Rickettsia rickettsii str. Hlp#2]
gi|376332226|gb|AFB29460.1| DNA polymerase I [Rickettsia rickettsii str. Hlp#2]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIVQLPLVRDVASNLNFPILEKN 108
>gi|238650585|ref|YP_002916437.1| DNA polymerase I [Rickettsia peacockii str. Rustic]
gi|238624683|gb|ACR47389.1| DNA polymerase I [Rickettsia peacockii str. Rustic]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIVQLPLVRDVASNLNFPILEKN 108
>gi|336122868|ref|YP_004564916.1| DNA polymerase I [Vibrio anguillarum 775]
gi|335340591|gb|AEH31874.1| DNA polymerase I [Vibrio anguillarum 775]
Length = 971
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I + + D
Sbjct: 102 IFDAKGKTFRDDMYPQYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISIEGVEAD 156
>gi|365540266|ref|ZP_09365441.1| DNA polymerase I [Vibrio ordalii ATCC 33509]
Length = 931
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I + + D
Sbjct: 61 IFDAKGKTFRDDMYPQYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISIEGVEAD 115
>gi|218708173|ref|YP_002415794.1| DNA polymerase I [Vibrio splendidus LGP32]
gi|218321192|emb|CAV17142.1| DNA polymerase I [Vibrio splendidus LGP32]
Length = 933
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I +
Sbjct: 61 IFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISI 109
>gi|383482671|ref|YP_005391585.1| DNA polymerase I [Rickettsia montanensis str. OSU 85-930]
gi|5912324|emb|CAB56079.1| DNA polymerase I [Rickettsia montanensis]
gi|378935025|gb|AFC73526.1| DNA polymerase I [Rickettsia montanensis str. OSU 85-930]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIVQLPLVRDVASNLNFPILEKN 108
>gi|148976539|ref|ZP_01813235.1| DNA polymerase I [Vibrionales bacterium SWAT-3]
gi|145964115|gb|EDK29372.1| DNA polymerase I [Vibrionales bacterium SWAT-3]
Length = 932
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I +
Sbjct: 61 IFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISI 109
>gi|84386305|ref|ZP_00989333.1| DNA polymerase I [Vibrio splendidus 12B01]
gi|84378729|gb|EAP95584.1| DNA polymerase I [Vibrio splendidus 12B01]
Length = 937
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I +
Sbjct: 61 IFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISI 109
>gi|374319750|ref|YP_005066249.1| DNA polymerase I [Rickettsia slovaca 13-B]
gi|383751824|ref|YP_005426925.1| DNA polymerase I [Rickettsia slovaca str. D-CWPP]
gi|360042299|gb|AEV92681.1| DNA polymerase I [Rickettsia slovaca 13-B]
gi|379774838|gb|AFD20194.1| DNA polymerase I [Rickettsia slovaca str. D-CWPP]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIIQLPLVRDVASNLNFPILEKN 108
>gi|86146596|ref|ZP_01064918.1| DNA polymerase I [Vibrio sp. MED222]
gi|85835653|gb|EAQ53789.1| DNA polymerase I [Vibrio sp. MED222]
Length = 933
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I +
Sbjct: 61 IFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISI 109
>gi|383484503|ref|YP_005393416.1| DNA polymerase I [Rickettsia parkeri str. Portsmouth]
gi|378936857|gb|AFC75357.1| DNA polymerase I [Rickettsia parkeri str. Portsmouth]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIIQLPLVRDVASNLNFPILEKN 108
>gi|229587139|ref|YP_002845640.1| DNA polymerase I [Rickettsia africae ESF-5]
gi|228022189|gb|ACP53897.1| DNA polymerase I [Rickettsia africae ESF-5]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIIQLPLVRDVASNLNFPILEKN 108
>gi|34581200|ref|ZP_00142680.1| DNA polymerase I (POL I) [Rickettsia sibirica 246]
gi|5912320|emb|CAB56103.1| DNA polymerase I [Rickettsia sibirica]
gi|28262585|gb|EAA26089.1| DNA polymerase I (POL I) [Rickettsia sibirica 246]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIIQLPLVRDVASNLNFPILEKN 108
>gi|407069591|ref|ZP_11100429.1| DNA polymerase I [Vibrio cyclitrophicus ZF14]
Length = 937
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I +
Sbjct: 61 IFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISI 109
>gi|417951299|ref|ZP_12594406.1| DNA polymerase I [Vibrio splendidus ATCC 33789]
gi|342805251|gb|EGU40529.1| DNA polymerase I [Vibrio splendidus ATCC 33789]
Length = 932
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I +
Sbjct: 61 IFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISI 109
>gi|91774714|ref|YP_544470.1| DNA polymerase I [Methylobacillus flagellatus KT]
gi|91708701|gb|ABE48629.1| DNA polymerase I [Methylobacillus flagellatus KT]
Length = 910
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 2 GESYGLLWRGFLSYNIR-HDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
GE G ++ G L+ R H Y D + V D A G FR +YP YK +RPP PD +
Sbjct: 28 GEPTGAMY-GVLNMLRRLHKDYPADYSACVFD---AKGKTFRDDIYPDYKAHRPPMPDDL 83
Query: 61 VQGLQYLKASIKAMSIKVIEVNVMYED 87
+ ++ L +I+AM ++ ++ + D
Sbjct: 84 SRQIEPLHEAIRAMGWPLLMIDGVEAD 110
>gi|15893129|ref|NP_360843.1| DNA polymerase I [Rickettsia conorii str. Malish 7]
gi|81527867|sp|Q92GB7.1|DPO1_RICCN RecName: Full=DNA polymerase I; Short=POL I
gi|15620336|gb|AAL03744.1| DNA polymerase I (POL I) [Rickettsia conorii str. Malish 7]
Length = 875
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIIQLPLVRDVASNLNFPILEKN 108
>gi|228470367|ref|ZP_04055270.1| DNA polymerase type I [Porphyromonas uenonis 60-3]
gi|228307949|gb|EEK16832.1| DNA polymerase type I [Porphyromonas uenonis 60-3]
Length = 948
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G FRH YP YK NRP TP+TI + Y+K ++A I ++ V
Sbjct: 63 GGTFRHKEYPEYKANRPETPETIRFSMPYIKELVQAYQIPLLGV 106
>gi|319941599|ref|ZP_08015924.1| DNA polymerase I [Sutterella wadsworthensis 3_1_45B]
gi|319804901|gb|EFW01747.1| DNA polymerase I [Sutterella wadsworthensis 3_1_45B]
Length = 952
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAM 74
++ A G FRH +YP+YK NRPP P+ + ++ L+ ++A+
Sbjct: 56 IFDAPGKTFRHEMYPAYKANRPPMPEELRTQIEPLQGIVRAL 97
>gi|94501578|ref|ZP_01308095.1| DNA polymerase I [Bermanella marisrubri]
gi|94426261|gb|EAT11252.1| DNA polymerase I [Oceanobacter sp. RED65]
Length = 916
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR+ +YP YK +RPP PD + +Q + IKAM + ++ + NV +D G
Sbjct: 68 VFDAKGKTFRNDIYPEYKAHRPPMPDDLRVQIQPIHDIIKAMGLPLLVIDNVEADDVIG 126
>gi|378824230|ref|ZP_09846756.1| 5'-3' exonuclease, SAM domain protein, partial [Sutterella
parvirubra YIT 11816]
gi|378596944|gb|EHY30306.1| 5'-3' exonuclease, SAM domain protein, partial [Sutterella
parvirubra YIT 11816]
Length = 317
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAM 74
++ A G NFRH +YP YK NRPP PD + + L ++A+
Sbjct: 56 VFDAPGKNFRHEMYPEYKANRPPMPDDLRVQIAPLHGVLEAL 97
>gi|332300236|ref|YP_004442157.1| DNA polymerase I [Porphyromonas asaccharolytica DSM 20707]
gi|332177299|gb|AEE12989.1| DNA polymerase I [Porphyromonas asaccharolytica DSM 20707]
Length = 948
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G FRH YP YK NRP TP+TI + Y+K ++A I ++ V
Sbjct: 63 GGTFRHKEYPEYKANRPETPETIRFSMPYIKELVQAYQIPLLGV 106
>gi|219110613|ref|XP_002177058.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411593|gb|EEC51521.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 389
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FRH+LYP YK NRP P +V ++ + KA I IE D
Sbjct: 117 VFDAKGKTFRHSLYPEYKGNRPDAPVDLVPQFALVREAAKAYGIPQIEAATFEAD 171
>gi|312882610|ref|ZP_07742349.1| DNA polymerase I [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369695|gb|EFP97208.1| DNA polymerase I [Vibrio caribbenthicus ATCC BAA-2122]
Length = 927
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +YP YK NRPP PD + ++ L IKAM + +I V
Sbjct: 61 IFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIKAMGLPLICV 109
>gi|402703044|ref|ZP_10851023.1| DNA polymerase I [Rickettsia helvetica C9P9]
gi|14916560|sp|Q9RLB6.1|DPO1_RICHE RecName: Full=DNA polymerase I; Short=POL I
gi|5912332|emb|CAB56073.1| DNA polymerase I [Rickettsia helvetica]
Length = 921
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E N
Sbjct: 59 VFDSGGKNFRHYIYPEYKANRPPPPEDLIVQLPLVRDVASNLNFPILEKN 108
>gi|313885797|ref|ZP_07819541.1| DNA-directed DNA polymerase [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924751|gb|EFR35516.1| DNA-directed DNA polymerase [Porphyromonas asaccharolytica
PR426713P-I]
Length = 948
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G FRH YP YK NRP TP+TI + Y+K ++A I ++ V
Sbjct: 63 GGTFRHKEYPEYKANRPETPETIRFSMPYIKELVQAYQIPLLGV 106
>gi|418518257|ref|ZP_13084406.1| exodeoxyribonuclease IX [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|418523147|ref|ZP_13089171.1| exodeoxyribonuclease IX [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410700303|gb|EKQ58865.1| exodeoxyribonuclease IX [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410704334|gb|EKQ62818.1| exodeoxyribonuclease IX [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
Length = 328
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR PTPD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHAIYPAYKGNRTPTPDALRRQFAHCKALCAALGLSVL 121
>gi|328951917|ref|YP_004369251.1| DNA polymerase I [Desulfobacca acetoxidans DSM 11109]
gi|328452241|gb|AEB08070.1| DNA polymerase I [Desulfobacca acetoxidans DSM 11109]
Length = 896
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FRH YP+YK +RP P+ +V+ L Y++ I A+++ +E+
Sbjct: 71 VFDAKGPTFRHRRYPAYKAHRPGMPEDLVKQLGYIRQIITALNLPALEM 119
>gi|452823946|gb|EME30952.1| DNA polymerase I [Galdieria sulphuraria]
Length = 1050
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 42 RHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
R +YP YK NR P I +GL Y+KA + A+ I +IEV
Sbjct: 134 RRLIYPDYKRNRSKLPTAIEKGLPYIKALVSALGISIIEV 173
>gi|374386528|ref|ZP_09644028.1| DNA polymerase I [Odoribacter laneus YIT 12061]
gi|373224457|gb|EHP46797.1| DNA polymerase I [Odoribacter laneus YIT 12061]
Length = 895
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)
Query: 3 ESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGAC----------------------GMN 40
++Y L++R + Y H+ +T ++ +G C G
Sbjct: 11 DAYALIYRSY--YAFIHNPRITTTGINTSATFGFCNFLLELLELEKPTHIAVVFDPEGPT 68
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FRH +Y YK RP P+ + + + Y+K IK + IK IE+
Sbjct: 69 FRHEMYAPYKAQRPKMPEDLRKSIPYIKDIIKGLGIKCIEI 109
>gi|226941896|ref|YP_002796970.1| PolA [Laribacter hongkongensis HLHK9]
gi|226716823|gb|ACO75961.1| PolA [Laribacter hongkongensis HLHK9]
Length = 932
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +RPP PD + Q + + A+++A+ ++ V+ + D
Sbjct: 52 YSACIFDAKGKTFRDDLYPAYKAHRPPMPDDLRQQIAPVHAAVRALGWPLLMVDGVEAD 110
>gi|301062352|ref|ZP_07203015.1| DNA-directed DNA polymerase [delta proteobacterium NaphS2]
gi|300443556|gb|EFK07658.1| DNA-directed DNA polymerase [delta proteobacterium NaphS2]
Length = 893
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
++ A G FRH LY YK NRPP P + L +++ +K + I ++E
Sbjct: 60 VFDAKGPTFRHDLYEEYKANRPPMPHDMAAQLPFIRKVVKNLGIAMLE 107
>gi|92116074|ref|YP_575803.1| DNA polymerase I [Nitrobacter hamburgensis X14]
gi|91798968|gb|ABE61343.1| DNA polymerase I [Nitrobacter hamburgensis X14]
Length = 1014
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ LYP+YK +RPP PD ++ ++ ++KA + IE
Sbjct: 101 VTFRNKLYPAYKAHRPPAPDDLIPQFALIREAVKAFDLPCIE 142
>gi|343495823|ref|ZP_08733935.1| DNA polymerase I [Vibrio nigripulchritudo ATCC 27043]
gi|342822158|gb|EGU56909.1| DNA polymerase I [Vibrio nigripulchritudo ATCC 27043]
Length = 929
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR +YP YK NRPP PD + ++ L IKAM + +I V V +D G
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLYEVIKAMGLPLICVPGVEADDVIG 119
>gi|359299477|ref|ZP_09185316.1| DNA polymerase I [Haemophilus [parainfluenzae] CCUG 13788]
gi|402304367|ref|ZP_10823437.1| DNA-directed DNA polymerase [Haemophilus sputorum HK 2154]
gi|400377955|gb|EJP30820.1| DNA-directed DNA polymerase [Haemophilus sputorum HK 2154]
Length = 959
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L A IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQIQPLHAIIKALGIPLISIEGVEAD 115
>gi|387891183|ref|YP_006321481.1| DNA polymerase I [Escherichia blattae DSM 4481]
gi|414594470|ref|ZP_11444106.1| DNA polymerase I [Escherichia blattae NBRC 105725]
gi|386926016|gb|AFJ48970.1| DNA polymerase I [Escherichia blattae DSM 4481]
gi|403194465|dbj|GAB81758.1| DNA polymerase I [Escherichia blattae NBRC 105725]
Length = 928
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ SYK+NRPP PD + ++ L A +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFESYKSNRPPMPDDLRVQIEPLHAMVKAMGLPLLVV 109
>gi|256830888|ref|YP_003159616.1| DNA polymerase I [Desulfomicrobium baculatum DSM 4028]
gi|256580064|gb|ACU91200.1| DNA polymerase I [Desulfomicrobium baculatum DSM 4028]
Length = 861
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
FRH L P+YK NRP P+ + L+ LKA ++ + I+V+E
Sbjct: 74 FRHELLPTYKANRPRMPEGLAAQLEPLKAGLRLLGIRVLE 113
>gi|87198303|ref|YP_495560.1| DNA polymerase I [Novosphingobium aromaticivorans DSM 12444]
gi|87133984|gb|ABD24726.1| DNA polymerase I [Novosphingobium aromaticivorans DSM 12444]
Length = 945
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 1 MGESYG---LLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTP 57
+G YG +LW+ + D + D + + G +FR+ LY YK NRPP P
Sbjct: 34 VGAVYGYTTMLWK------LAEDLHKADGPTHLAVILDKAGTSFRNDLYDQYKANRPPPP 87
Query: 58 DTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
+ +V ++ + +A S+ IE + + D
Sbjct: 88 EDLVPQFPLIRDATRAFSLACIEEDALEAD 117
>gi|371777453|ref|ZP_09483775.1| DNA polymerase I [Anaerophaga sp. HS1]
Length = 921
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G FR+ L+P YK NR TP+ I + + Y+K + A +IK+++V+
Sbjct: 67 GPTFRNYLFPDYKANREDTPEDIKKAVPYIKKILDAFNIKIVQVD 111
>gi|332139424|ref|YP_004425162.1| DNA polymerase I [Alteromonas macleodii str. 'Deep ecotype']
gi|327549446|gb|AEA96164.1| DNA polymerase I [Alteromonas macleodii str. 'Deep ecotype']
Length = 930
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR +Y YK NRPP P+ + ++ L IKAM + VI E V +D G
Sbjct: 61 IFDAKGKTFRDDIYKEYKANRPPMPEELRSQIEPLHTIIKAMGLPVIVESGVEADDVIG 119
>gi|114322007|ref|YP_743690.1| DNA polymerase I [Alkalilimnicola ehrlichii MLHE-1]
gi|114228401|gb|ABI58200.1| DNA polymerase I [Alkalilimnicola ehrlichii MLHE-1]
Length = 912
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK +RPP PD + +Q LK I+AM + ++EV
Sbjct: 60 VFDAPGRTFRDELFDQYKAHRPPMPDELRAQIQPLKDIIRAMGLPLLEV 108
>gi|295132395|ref|YP_003583071.1| DNA polymerase I [Zunongwangia profunda SM-A87]
gi|294980410|gb|ADF50875.1| DNA polymerase I [Zunongwangia profunda SM-A87]
Length = 941
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G R L+ YK NR TP+ I+QG+ Y+++ +KAM I V+E+
Sbjct: 66 GSEVRTELFSDYKANRDATPEPIMQGIPYIQSILKAMHIPVVEL 109
>gi|78484390|ref|YP_390315.1| DNA polymerase I [Thiomicrospira crunogena XCL-2]
gi|78362676|gb|ABB40641.1| DNA polymerase I [Thiomicrospira crunogena XCL-2]
Length = 939
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN-VMYEDAYG 90
++ A G NFRH LY YK +RPP PD + ++ + IKA+ I ++ ++ V +D G
Sbjct: 66 VFDAKGKNFRHELYEDYKAHRPPMPDELRIQIEPIHEIIKALGIPLLVIDGVEADDVMG 124
>gi|294102246|ref|YP_003554104.1| DNA polymerase I [Aminobacterium colombiense DSM 12261]
gi|293617226|gb|ADE57380.1| DNA polymerase I [Aminobacterium colombiense DSM 12261]
Length = 854
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FRH +YP YK R PTP+ + L+ ++AM IKV+
Sbjct: 61 VFDAPGATFRHEIYPEYKMGRRPTPEEYKVQVPLLQQVVRAMGIKVV 107
>gi|412993369|emb|CCO16902.1| DNA polymerase I [Bathycoccus prasinos]
Length = 403
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
G FRH ++ YK NRPPTP+ ++ + + ++AM+I+ ++V+ + D
Sbjct: 156 GKTFRHEMFVDYKANRPPTPEALIALIPKVSELVEAMAIETVKVSGVEAD 205
>gi|358410693|gb|AEU10079.1| DNA polymerase I [Photobacterium damselae subsp. piscicida]
Length = 923
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK NRPP PD + ++ L A IKAM + +I ++ + D
Sbjct: 61 IFDAKGKTFRDEMFADYKANRPPMPDDLRGQIEPLHAVIKAMGLPLISISGVEAD 115
>gi|269103720|ref|ZP_06156417.1| DNA polymerase I [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163618|gb|EEZ42114.1| DNA polymerase I [Photobacterium damselae subsp. damselae CIP
102761]
Length = 923
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK NRPP PD + ++ L A IKAM + +I ++ + D
Sbjct: 61 IFDAKGKTFRDEMFADYKANRPPMPDDLRGQIEPLHAVIKAMGLPLISISGVEAD 115
>gi|341584358|ref|YP_004764849.1| DNA polymerase I [Rickettsia heilongjiangensis 054]
gi|340808583|gb|AEK75171.1| DNA polymerase I [Rickettsia heilongjiangensis 054]
Length = 875
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E
Sbjct: 59 VFDSGGQNFRHQIYPDYKANRPPPPEDLIVQLPLVRDVASNLNFPILE 106
>gi|442611897|ref|ZP_21026597.1| DNA polymerase I [Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441746367|emb|CCQ12659.1| DNA polymerase I [Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 915
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +YP YK +RPP P+ + + L A IKAM +I + + D
Sbjct: 61 IFDAKGKTFRNDMYPEYKAHRPPMPEDLRSQIAPLHAIIKAMGFPLISIEGVEAD 115
>gi|153871900|ref|ZP_02000951.1| DNA-directed DNA polymerase [Beggiatoa sp. PS]
gi|152071634|gb|EDN69049.1| DNA-directed DNA polymerase [Beggiatoa sp. PS]
Length = 914
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FRH LYP YK NRPP P+ +V + ++A+ ++ E V +D G
Sbjct: 58 VFDAKGKKFRHELYPDYKKNRPPMPEELVVQISSTHDMVRALGFPLLMENGVEADDVIG 116
>gi|452126208|ref|ZP_21938791.1| DNA polymerase I [Bordetella holmesii F627]
gi|452129576|ref|ZP_21942151.1| DNA polymerase I [Bordetella holmesii H558]
gi|451921303|gb|EMD71448.1| DNA polymerase I [Bordetella holmesii F627]
gi|451923211|gb|EMD73353.1| DNA polymerase I [Bordetella holmesii H558]
Length = 906
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 23 MTDITLDVHDLYGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK 77
+ + LD Y AC G FR LYP YK++RPP P + ++ + A+++A+
Sbjct: 42 LRKLVLDHKAEYAACIFDARGKTFRDDLYPEYKSHRPPIPPDLAAQIEPIHAAVRALGWP 101
Query: 78 VIEVNVMYED 87
V+ V + D
Sbjct: 102 VMAVEGVEAD 111
>gi|400406153|ref|YP_006588901.1| DNA polymerase I [secondary endosymbiont of Heteropsylla cubana]
gi|400364406|gb|AFP85473.1| DNA polymerase I [secondary endosymbiont of Heteropsylla cubana]
Length = 932
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ A FRH L+ YK +R P PD ++ ++ L IKAM + ++E+N
Sbjct: 61 IFDAPNKTFRHQLFKDYKAHRAPMPDDLISQIKPLHDMIKAMGLSLLEIN 110
>gi|407786617|ref|ZP_11133762.1| DNA polymerase I [Celeribacter baekdonensis B30]
gi|407201338|gb|EKE71339.1| DNA polymerase I [Celeribacter baekdonensis B30]
Length = 935
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ G FR+ L+P+YK NRPP P+ +V + + +A ++ IE+
Sbjct: 66 IFDYSGKTFRNDLFPAYKANRPPAPEELVPQFPLTREATRAFNVSCIEI 114
>gi|219870449|ref|YP_002474824.1| DNA polymerase I [Haemophilus parasuis SH0165]
gi|219690653|gb|ACL31876.1| DNA polymerase I [Haemophilus parasuis SH0165]
Length = 954
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L A IKA+ I ++ + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDELRSQIQPLHAIIKALGIPLLSIEGVEAD 115
>gi|167856246|ref|ZP_02478980.1| DNA polymerase I (POL I) [Haemophilus parasuis 29755]
gi|167852633|gb|EDS23913.1| DNA polymerase I (POL I) [Haemophilus parasuis 29755]
Length = 954
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L A IKA+ I ++ + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDELRSQIQPLHAIIKALGIPLLSIEGVEAD 115
>gi|30249439|ref|NP_841509.1| polA; DNA polymerase I protein [Nitrosomonas europaea ATCC 19718]
gi|30138802|emb|CAD85379.1| polA; DNA polymerase I protein [Nitrosomonas europaea ATCC 19718]
Length = 912
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 19 HDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK- 77
H Y D + V D A G FR +YP YK +RPP P+ +V + L A I+AM
Sbjct: 45 HKEYRPDYSACVFD---AKGKTFRDDIYPQYKAHRPPMPEDLVCQIGPLYACIRAMGWPL 101
Query: 78 VIEVNVMYEDAYG 90
+IE V +D G
Sbjct: 102 LIEEGVEADDVIG 114
>gi|50086044|ref|YP_047554.1| DNA polymerase I [Acinetobacter sp. ADP1]
gi|49532020|emb|CAG69732.1| DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5'
exonuclease [Acinetobacter sp. ADP1]
Length = 920
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP PD + Q + YL A IKA+ I
Sbjct: 64 FRHELSPIYKGDRPSMPDELAQQIPYLHALIKALGI 99
>gi|325922731|ref|ZP_08184469.1| 5'-3' exonuclease (including N-terminal domain of PolI)
[Xanthomonas gardneri ATCC 19865]
gi|325546798|gb|EGD17914.1| 5'-3' exonuclease (including N-terminal domain of PolI)
[Xanthomonas gardneri ATCC 19865]
Length = 328
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH LYP+YK NR P PD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHALYPAYKGNRTPAPDALRRQFAHCKALCAALGLSVL 121
>gi|260775065|ref|ZP_05883964.1| DNA polymerase I [Vibrio coralliilyticus ATCC BAA-450]
gi|260608982|gb|EEX35142.1| DNA polymerase I [Vibrio coralliilyticus ATCC BAA-450]
Length = 931
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I V
Sbjct: 61 VFDAKGKTFRDEMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICV 109
>gi|157964926|ref|YP_001499750.1| DNA polymerase I [Rickettsia massiliae MTU5]
gi|157844702|gb|ABV85203.1| DNA polymerase I [Rickettsia massiliae MTU5]
Length = 875
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
++ + G NFRH +YP YK NRPP P+ ++ L ++ ++ ++E
Sbjct: 59 VFDSGGKNFRHQIYPDYKANRPPPPEDLIVQLPLVRDVASNLNFPILE 106
>gi|110835520|ref|YP_694379.1| DNA polymerase I [Alcanivorax borkumensis SK2]
gi|110648631|emb|CAL18107.1| DNA polymerase I [Alcanivorax borkumensis SK2]
Length = 956
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FR L+ YK+NRPP PD + +Q L I+AM + +IE V +D G
Sbjct: 97 IFDAKGKTFRDELFEEYKSNRPPMPDDLRAQVQPLHDLIRAMGLPLIIEDGVEADDVIG 155
>gi|119475294|ref|ZP_01615647.1| DNA polymerase I [marine gamma proteobacterium HTCC2143]
gi|119451497|gb|EAW32730.1| DNA polymerase I [marine gamma proteobacterium HTCC2143]
Length = 920
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK +RPP PD + + ++ + IKAM + +I ++ + D
Sbjct: 61 IFDAKGKTFRDDIYPEYKAHRPPMPDDLREQIEPIHNIIKAMGLPLIIIDGVEAD 115
>gi|56551123|ref|YP_161962.1| DNA polymerase I [Zymomonas mobilis subsp. mobilis ZM4]
gi|56542697|gb|AAV88851.1| DNA polymerase I [Zymomonas mobilis subsp. mobilis ZM4]
Length = 921
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 2 GESYG---LLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPD 58
G YG +LW+ L NIR D ++ + +FR LYP+YK +RPP P+
Sbjct: 38 GAVYGFTTMLWK--LVENIRKQD---DAPTHFAVIFDSSRKSFRQDLYPAYKAHRPPPPE 92
Query: 59 TIVQGLQYLKASIKAMSIKVIE 80
+V ++ + +A S+ IE
Sbjct: 93 DLVPQFPLIREATRAFSVPSIE 114
>gi|397676861|ref|YP_006518399.1| DNA polymerase I [Zymomonas mobilis subsp. mobilis ATCC 29191]
gi|395397550|gb|AFN56877.1| DNA polymerase I [Zymomonas mobilis subsp. mobilis ATCC 29191]
Length = 921
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 2 GESYG---LLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPD 58
G YG +LW+ L NIR D ++ + +FR LYP+YK +RPP P+
Sbjct: 38 GAVYGFTTMLWK--LVENIRKQD---DAPTHFAVIFDSSRKSFRQDLYPAYKAHRPPPPE 92
Query: 59 TIVQGLQYLKASIKAMSIKVIE 80
+V ++ + +A S+ IE
Sbjct: 93 DLVPQFPLIREATRAFSVPSIE 114
>gi|260753224|ref|YP_003226117.1| DNA polymerase I [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258552587|gb|ACV75533.1| DNA polymerase I [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 921
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 2 GESYG---LLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPD 58
G YG +LW+ L NIR D ++ + +FR LYP+YK +RPP P+
Sbjct: 38 GAVYGFTTMLWK--LVENIRKQD---DAPTHFAVIFDSSRKSFRQDLYPAYKAHRPPPPE 92
Query: 59 TIVQGLQYLKASIKAMSIKVIE 80
+V ++ + +A S+ IE
Sbjct: 93 DLVPQFPLIREATRAFSVPSIE 114
>gi|384411715|ref|YP_005621080.1| DNA polymerase I [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|335932089|gb|AEH62629.1| DNA polymerase I [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 921
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 2 GESYG---LLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPD 58
G YG +LW+ L NIR D ++ + +FR LYP+YK +RPP P+
Sbjct: 38 GAVYGFTTMLWK--LVENIRKQD---DAPTHFAVIFDSSRKSFRQDLYPAYKAHRPPPPE 92
Query: 59 TIVQGLQYLKASIKAMSIKVIE 80
+V ++ + +A S+ IE
Sbjct: 93 DLVPQFPLIREATRAFSVPSIE 114
>gi|197303212|ref|ZP_03168254.1| hypothetical protein RUMLAC_01936 [Ruminococcus lactaris ATCC
29176]
gi|197297752|gb|EDY32310.1| DNA-directed DNA polymerase [Ruminococcus lactaris ATCC 29176]
Length = 871
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 5 YGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGL 64
YG L F + Y+T +T DVH FRH +Y YK R P + + Q +
Sbjct: 36 YGFLNIMFKILDEEKPEYLT-VTFDVH------APTFRHEMYQEYKGTRKPMAEELRQQV 88
Query: 65 QYLKASIKAMSIKVIE 80
+K +KAM+I++IE
Sbjct: 89 PVIKEVLKAMNIEIIE 104
>gi|408375632|ref|ZP_11173293.1| DNA polymerase I [Alcanivorax hongdengensis A-11-3]
gi|407764508|gb|EKF72984.1| DNA polymerase I [Alcanivorax hongdengensis A-11-3]
Length = 920
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FR L+ YK+NRPP PD + +Q L I+AM + +IE V +D G
Sbjct: 60 VFDAKGKTFRDELFEEYKSNRPPMPDDLRAQVQPLHDLIRAMGLPLIIEEGVEADDVIG 118
>gi|406039503|ref|ZP_11046858.1| DNA polymerase I [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 920
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP PD + Q + YL A IKA+ I
Sbjct: 64 FRHELSPIYKGDRPSMPDELAQQIPYLHALIKALGI 99
>gi|319788387|ref|YP_004147862.1| DNA polymerase I [Pseudoxanthomonas suwonensis 11-1]
gi|317466899|gb|ADV28631.1| DNA polymerase I [Pseudoxanthomonas suwonensis 11-1]
Length = 927
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
A G FR LYP YK NRPP PD + +Q + + A+ I ++ V+ + D
Sbjct: 58 APGKTFRDDLYPQYKANRPPMPDELRAQVQPMCDIVHALGIDILRVDGVEAD 109
>gi|385330034|ref|YP_005883985.1| LOW QUALITY PROTEIN: DNA polymerase I [Marinobacter adhaerens
HP15]
gi|311693184|gb|ADP96057.1| LOW QUALITY PROTEIN: DNA polymerase I [Marinobacter adhaerens
HP15]
Length = 868
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FRH LY YK NRPP P+ + ++ + +KAM + ++ V + D
Sbjct: 20 VFDAKGKTFRHDLYEEYKANRPPMPEDLACQIEPIHEIVKAMGLPLLTVTGVEAD 74
>gi|407698144|ref|YP_006822932.1| DNA polymerase I superfamily [Alcanivorax dieselolei B5]
gi|407255482|gb|AFT72589.1| DNA polymerase I superfamily [Alcanivorax dieselolei B5]
Length = 921
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FR L+ YK NRPP PD + + +Q L I+AM + ++E V +D G
Sbjct: 59 VFDAKGKTFRDELFEEYKANRPPMPDELREQVQPLHDLIRAMGLPLIVEEGVEADDVIG 117
>gi|375264129|ref|YP_005021572.1| DNA polymerase I [Vibrio sp. EJY3]
gi|369839453|gb|AEX20597.1| DNA polymerase I [Vibrio sp. EJY3]
Length = 930
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I V
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICV 109
>gi|343500982|ref|ZP_08738867.1| DNA polymerase I [Vibrio tubiashii ATCC 19109]
gi|418478599|ref|ZP_13047698.1| DNA polymerase I [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342819561|gb|EGU54404.1| DNA polymerase I [Vibrio tubiashii ATCC 19109]
gi|384573754|gb|EIF04242.1| DNA polymerase I [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 930
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|424048318|ref|ZP_17785872.1| DNA polymerase I [Vibrio cholerae HENC-03]
gi|408882953|gb|EKM21748.1| DNA polymerase I [Vibrio cholerae HENC-03]
Length = 930
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|424035698|ref|ZP_17774881.1| DNA polymerase I [Vibrio cholerae HENC-02]
gi|408897485|gb|EKM33248.1| DNA polymerase I [Vibrio cholerae HENC-02]
Length = 930
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|423329673|ref|ZP_17307479.1| DNA polymerase I [Myroides odoratimimus CCUG 3837]
gi|404603301|gb|EKB02976.1| DNA polymerase I [Myroides odoratimimus CCUG 3837]
Length = 939
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G + R L+P YK NR TP+ I + Y+K ++AM I ++EVN
Sbjct: 66 GSDLRLELFPEYKANRDETPEAIKIAVPYIKQILEAMHIPIVEVN 110
>gi|444424781|ref|ZP_21220233.1| DNA polymerase I [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444241904|gb|ELU53422.1| DNA polymerase I [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 930
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|269959443|ref|ZP_06173826.1| DNA polymerase I [Vibrio harveyi 1DA3]
gi|269835880|gb|EEZ89956.1| DNA polymerase I [Vibrio harveyi 1DA3]
Length = 930
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|404404930|ref|ZP_10996514.1| DNA polymerase I [Alistipes sp. JC136]
Length = 958
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G +FR ++P YK NR TP+ I+ + Y+K ++AM I ++EV
Sbjct: 63 GGSFRRDIFPEYKANRAETPEDILLSVPYVKRVLEAMCIPILEV 106
>gi|358450341|ref|ZP_09160805.1| DNA polymerase I [Marinobacter manganoxydans MnI7-9]
gi|357225459|gb|EHJ03960.1| DNA polymerase I [Marinobacter manganoxydans MnI7-9]
Length = 910
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FRH LY YK NRPP P+ + ++ + +KAM + ++ V + D
Sbjct: 61 VFDAKGKTFRHDLYEEYKANRPPMPEDLACQIEPIHEIVKAMGLPLLTVTGVEAD 115
>gi|350529887|ref|ZP_08908828.1| DNA polymerase I [Vibrio rotiferianus DAT722]
Length = 930
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|163802211|ref|ZP_02196106.1| DNA polymerase I [Vibrio sp. AND4]
gi|159174016|gb|EDP58826.1| DNA polymerase I [Vibrio sp. AND4]
Length = 930
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|156972895|ref|YP_001443802.1| DNA polymerase I [Vibrio harveyi ATCC BAA-1116]
gi|156524489|gb|ABU69575.1| hypothetical protein VIBHAR_00572 [Vibrio harveyi ATCC BAA-1116]
Length = 930
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|153833784|ref|ZP_01986451.1| DNA polymerase I [Vibrio harveyi HY01]
gi|148869842|gb|EDL68810.1| DNA polymerase I [Vibrio harveyi HY01]
Length = 930
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|424034473|ref|ZP_17773878.1| DNA polymerase I [Vibrio cholerae HENC-01]
gi|408873076|gb|EKM12283.1| DNA polymerase I [Vibrio cholerae HENC-01]
Length = 930
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|388602773|ref|ZP_10161169.1| DNA polymerase I [Vibrio campbellii DS40M4]
Length = 930
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|323493194|ref|ZP_08098324.1| DNA polymerase I [Vibrio brasiliensis LMG 20546]
gi|323312541|gb|EGA65675.1| DNA polymerase I [Vibrio brasiliensis LMG 20546]
Length = 931
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|75674555|ref|YP_316976.1| DNA polymerase I [Nitrobacter winogradskyi Nb-255]
gi|74419425|gb|ABA03624.1| DNA polymerase A [Nitrobacter winogradskyi Nb-255]
Length = 1010
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ LYP+YK +RPP PD ++ ++ ++KA + +E
Sbjct: 96 VTFRNKLYPAYKAHRPPAPDDLIPQFALIREAVKAFDLPCLE 137
>gi|323499675|ref|ZP_08104643.1| DNA polymerase I [Vibrio sinaloensis DSM 21326]
gi|323315276|gb|EGA68319.1| DNA polymerase I [Vibrio sinaloensis DSM 21326]
Length = 929
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|85713433|ref|ZP_01044423.1| DNA polymerase I [Nitrobacter sp. Nb-311A]
gi|85699337|gb|EAQ37204.1| DNA polymerase I [Nitrobacter sp. Nb-311A]
Length = 1020
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ LYP+YK +RPP PD ++ ++ ++KA + +E
Sbjct: 96 VTFRNKLYPAYKAHRPPAPDDLIPQFALIREAVKAFDLPCLE 137
>gi|254508258|ref|ZP_05120381.1| DNA polymerase I superfamily protein [Vibrio parahaemolyticus 16]
gi|219548775|gb|EED25777.1| DNA polymerase I superfamily protein [Vibrio parahaemolyticus 16]
Length = 931
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I V
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICV 109
>gi|424865266|ref|ZP_18289135.1| DNA-directed DNA polymerase [SAR86 cluster bacterium SAR86B]
gi|400758872|gb|EJP73072.1| DNA-directed DNA polymerase [SAR86 cluster bacterium SAR86B]
Length = 891
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + LQ +K A+ +IE++ + D
Sbjct: 57 VFDAKGKTFRNDIYKEYKQNRPPMPDELRSQLQPVKDICSAIGFPLIEISGVEAD 111
>gi|261250089|ref|ZP_05942666.1| DNA polymerase I [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417955025|ref|ZP_12598051.1| DNA polymerase I [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260939593|gb|EEX95578.1| DNA polymerase I [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342814073|gb|EGU49025.1| DNA polymerase I [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 931
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +YP YK NRPP PD + ++ L I+AM + +I
Sbjct: 61 VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLI 107
>gi|149908537|ref|ZP_01897199.1| DNA polymerase I [Moritella sp. PE36]
gi|149808371|gb|EDM68308.1| DNA polymerase I [Moritella sp. PE36]
Length = 931
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR+ +YP YK NRPP PD + ++ + ++KA+ + +I
Sbjct: 61 IFDAKGPTFRNEMYPEYKANRPPMPDDLRCQIEPVHKAVKALGLPLI 107
>gi|197286655|ref|YP_002152527.1| DNA polymerase I [Proteus mirabilis HI4320]
gi|194684142|emb|CAR45571.1| DNA polymerase I [Proteus mirabilis HI4320]
Length = 932
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR LY YK+NRPP PD + + ++ L ++AM + ++ + + D
Sbjct: 61 VFDAKGKTFRDELYEEYKSNRPPMPDDLREQIEPLHEMVQAMGLPLLSITGVEAD 115
>gi|390946767|ref|YP_006410527.1| DNA polymerase I [Alistipes finegoldii DSM 17242]
gi|390423336|gb|AFL77842.1| DNA polymerase I [Alistipes finegoldii DSM 17242]
Length = 956
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G +FR ++P YK NR TP+ I+ + Y+K ++AM I ++EV
Sbjct: 63 GGSFRREVFPEYKANRAETPEDILLSVPYVKRVLEAMCIPILEV 106
>gi|334366159|ref|ZP_08515100.1| DNA-directed DNA polymerase [Alistipes sp. HGB5]
gi|313157640|gb|EFR57054.1| DNA-directed DNA polymerase [Alistipes sp. HGB5]
Length = 958
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G +FR ++P YK NR TP+ I+ + Y+K ++AM I ++EV
Sbjct: 63 GGSFRREVFPEYKANRAETPEDILLSVPYVKRVLEAMCIPILEV 106
>gi|425071066|ref|ZP_18474172.1| DNA polymerase I [Proteus mirabilis WGLW4]
gi|404599891|gb|EKB00344.1| DNA polymerase I [Proteus mirabilis WGLW4]
Length = 949
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR LY YK+NRPP PD + + ++ L ++AM + ++ + + D
Sbjct: 78 VFDAKGKTFRDELYEEYKSNRPPMPDDLREQIEPLHEMVQAMGLPLLSITGVEAD 132
>gi|425069608|ref|ZP_18472723.1| DNA polymerase I [Proteus mirabilis WGLW6]
gi|404597034|gb|EKA97541.1| DNA polymerase I [Proteus mirabilis WGLW6]
Length = 949
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR LY YK+NRPP PD + + ++ L ++AM + ++ + + D
Sbjct: 78 VFDAKGKTFRDELYEEYKSNRPPMPDDLREQIEPLHEMVQAMGLPLLSITGVEAD 132
>gi|227355154|ref|ZP_03839565.1| DNA polymerase I [Proteus mirabilis ATCC 29906]
gi|227164941|gb|EEI49788.1| DNA polymerase I [Proteus mirabilis ATCC 29906]
Length = 949
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR LY YK+NRPP PD + + ++ L ++AM + ++ + + D
Sbjct: 78 VFDAKGKTFRDELYEEYKSNRPPMPDDLREQIEPLHEMVQAMGLPLLSITGVEAD 132
>gi|88705360|ref|ZP_01103071.1| DNA polymerase I [Congregibacter litoralis KT71]
gi|88700450|gb|EAQ97558.1| DNA polymerase I [Congregibacter litoralis KT71]
Length = 909
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR +YP YK NRPP PD + + ++ + + ++ M + ++ E V +D G
Sbjct: 59 VFDAKGKTFRDDIYPEYKANRPPMPDDLREQIEPIHSIVRGMGLPLLCEPGVEADDVIG 117
>gi|170717348|ref|YP_001784457.1| DNA polymerase I [Haemophilus somnus 2336]
gi|168825477|gb|ACA30848.1| DNA polymerase I [Haemophilus somnus 2336]
Length = 951
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + Q +Q L IKA+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEIFEQYKSHRPPMPDDLRQQIQPLHNIIKALGIPLLSVEGVEAD 115
>gi|113460863|ref|YP_718930.1| DNA polymerase I [Haemophilus somnus 129PT]
gi|112822906|gb|ABI24995.1| DNA polymerase I [Haemophilus somnus 129PT]
Length = 951
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + Q +Q L IKA+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEIFEQYKSHRPPMPDDLRQQIQPLHNIIKALGIPLLSVEGVEAD 115
>gi|336423762|ref|ZP_08603882.1| hypothetical protein HMPREF0993_03259 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336002976|gb|EGN33071.1| hypothetical protein HMPREF0993_03259 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 871
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 5 YGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGL 64
YG L F Y+T + DVH FRH +Y YK R P D + Q +
Sbjct: 36 YGFLTIMFKILEEEKPDYLT-VAFDVH------APTFRHEMYEEYKGTRKPMADELRQQV 88
Query: 65 QYLKASIKAMSIKVIE 80
+K +KAM I++IE
Sbjct: 89 PVIKEVLKAMGIRIIE 104
>gi|384417979|ref|YP_005627339.1| exodeoxyribonuclease IX [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353460893|gb|AEQ95172.1| exodeoxyribonuclease IX [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 328
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK+NR P PD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHAIYPAYKSNRTPAPDALRRQFAHCKALCAALGLSVL 121
>gi|83648986|ref|YP_437421.1| DNA polymerase I [Hahella chejuensis KCTC 2396]
gi|83637029|gb|ABC32996.1| DNA polymerase I [Hahella chejuensis KCTC 2396]
Length = 911
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G NFRH +Y YK NRPP P+ + ++ L ++AM + ++
Sbjct: 64 VFDAKGKNFRHEMYSDYKANRPPMPEDLACQIEPLYDIVRAMGLPLL 110
>gi|58583261|ref|YP_202277.1| exodeoxyribonuclease IX [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84625095|ref|YP_452467.1| exodeoxyribonuclease IX [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188575436|ref|YP_001912365.1| exodeoxyribonuclease IX [Xanthomonas oryzae pv. oryzae PXO99A]
gi|58427855|gb|AAW76892.1| exodeoxyribonuclease IX [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84369035|dbj|BAE70193.1| exodeoxyribonuclease IX [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188519888|gb|ACD57833.1| exodeoxyribonuclease IX [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 328
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 16 NIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMS 75
N +H T D LD +C FRH +YP+YK NR P PD + + + KA A+
Sbjct: 67 NPQHITIAFDEALD------SC---FRHAIYPAYKGNRTPAPDALRRQFAHCKALCAALG 117
Query: 76 IKVI 79
+ V+
Sbjct: 118 LSVL 121
>gi|410620668|ref|ZP_11331528.1| DNA polymerase I [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410159775|dbj|GAC26902.1| DNA polymerase I [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 932
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR +Y YK NRPP PD + ++ L IKAM +I E V +D G
Sbjct: 61 IFDAKGKTFRDDIYKEYKANRPPMPDELRSQIKPLHKIIKAMGFPIIVEGGVEADDVIG 119
>gi|167758306|ref|ZP_02430433.1| hypothetical protein CLOSCI_00644 [Clostridium scindens ATCC 35704]
gi|167664203|gb|EDS08333.1| DNA-directed DNA polymerase [Clostridium scindens ATCC 35704]
Length = 871
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 5 YGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGL 64
YG L F Y+T + DVH FRH +Y YK R P D + Q +
Sbjct: 36 YGFLTIMFKILEEEKPDYLT-VAFDVH------APTFRHEMYEEYKGTRKPMADELRQQV 88
Query: 65 QYLKASIKAMSIKVIE 80
+K +KAM I++IE
Sbjct: 89 PVIKEVLKAMGIRIIE 104
>gi|291514801|emb|CBK64011.1| DNA polymerase I [Alistipes shahii WAL 8301]
Length = 958
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G +FR ++P YK NR TP+ I+ + Y+K + AM I ++EV
Sbjct: 63 GGSFRRDIFPEYKANRSETPEDILLSIPYVKRVLDAMCIPILEV 106
>gi|315125371|ref|YP_004067374.1| DNA polymerase I [Pseudoalteromonas sp. SM9913]
gi|315013884|gb|ADT67222.1| multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal);
3'->5' polymerase; 3'->5' exonuclease (C-terminal)
[Pseudoalteromonas sp. SM9913]
Length = 911
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + L + IKAM +I + + D
Sbjct: 61 VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPLHSIIKAMGFPLISIEGVEAD 115
>gi|410859668|ref|YP_006974902.1| DNA polymerase I [Alteromonas macleodii AltDE1]
gi|410816930|gb|AFV83547.1| DNA polymerase I [Alteromonas macleodii AltDE1]
Length = 930
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR +Y YK NRPP P+ + + L IKAM + VI E V +D G
Sbjct: 61 IFDAKGKTFRDDIYKEYKANRPPMPEELRSQIAPLHTIIKAMGLPVIVESGVEADDVIG 119
>gi|403049416|ref|ZP_10903900.1| DNA polymerase I, partial [SAR86 cluster bacterium SAR86D]
Length = 126
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK NRPP P+ + + L+ LK KA+ +IE+ + D
Sbjct: 57 VFDAKGKTFRSNIYKEYKANRPPMPEDLREQLKPLKDICKAIGFPLIEIEGVEAD 111
>gi|392555749|ref|ZP_10302886.1| DNA polymerase I [Pseudoalteromonas undina NCIMB 2128]
Length = 911
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + L + IKAM +I + + D
Sbjct: 61 VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPLHSIIKAMGFPLISIEGVEAD 115
>gi|359446945|ref|ZP_09236573.1| DNA polymerase I [Pseudoalteromonas sp. BSi20439]
gi|358039199|dbj|GAA72822.1| DNA polymerase I [Pseudoalteromonas sp. BSi20439]
Length = 911
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + L + IKAM +I + + D
Sbjct: 61 VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPLHSIIKAMGFPLISIEGVEAD 115
>gi|359438125|ref|ZP_09228166.1| DNA polymerase I [Pseudoalteromonas sp. BSi20311]
gi|358027176|dbj|GAA64415.1| DNA polymerase I [Pseudoalteromonas sp. BSi20311]
Length = 911
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + L + IKAM +I + + D
Sbjct: 61 VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPLHSIIKAMGFPLISIEGVEAD 115
>gi|365896869|ref|ZP_09434920.1| DNA polymerase I (POL I) [Bradyrhizobium sp. STM 3843]
gi|365422366|emb|CCE07462.1| DNA polymerase I (POL I) [Bradyrhizobium sp. STM 3843]
Length = 1025
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+T+YP YK +RPP PD ++ ++ +++A + +E
Sbjct: 101 VTFRNTIYPDYKAHRPPAPDDLIPQFALIREAVRAFDLPCLE 142
>gi|269958395|ref|YP_003328182.1| DNA polymerase I [Anaplasma centrale str. Israel]
gi|269848224|gb|ACZ48868.1| DNA polymerase I [Anaplasma centrale str. Israel]
Length = 849
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 1 MGESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
+G YG + L + + HD + D NFRH +YP YK NRP P+ +
Sbjct: 31 IGGVYGFI-NILLKHLMEHDADYLAVVFDTGS------KNFRHAMYPQYKMNRPRLPEDL 83
Query: 61 VQGLQYLKASIKAMSIKVIEV 81
++ L+ ++ A+ I EV
Sbjct: 84 LRQFSPLREAVSALGIASEEV 104
>gi|242280423|ref|YP_002992552.1| DNA polymerase I [Desulfovibrio salexigens DSM 2638]
gi|242123317|gb|ACS81013.1| DNA polymerase I [Desulfovibrio salexigens DSM 2638]
Length = 904
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
G NFRH LY YK RPP PD + ++ LK ++ + + +I
Sbjct: 71 GKNFRHELYDQYKAQRPPMPDDLRSQIEPLKEALNVIGVPLI 112
>gi|436843155|ref|YP_007327533.1| DNA polymerase I [Desulfovibrio hydrothermalis AM13 = DSM 14728]
gi|432172061|emb|CCO25434.1| DNA polymerase I [Desulfovibrio hydrothermalis AM13 = DSM 14728]
Length = 889
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
GMNFRH L+ YK RPP PD + ++ LK +++ + I ++
Sbjct: 71 GMNFRHELFDQYKAQRPPMPDDLRCQVEPLKEAMEILGIPLV 112
>gi|357403761|ref|YP_004915685.1| DNA polymerase I [Methylomicrobium alcaliphilum 20Z]
gi|351716426|emb|CCE22086.1| DNA polymerase I (POL I) [Methylomicrobium alcaliphilum 20Z]
Length = 907
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FRH LY YK +RPP PD + ++ L I+AM + +I + +V +D G
Sbjct: 61 IFDAPGKTFRHDLYDQYKAHRPPMPDDLRVQIEPLHRLIRAMGLPLIMQPDVEADDVIG 119
>gi|406979046|gb|EKE00901.1| hypothetical protein ACD_21C00255G0003 [uncultured bacterium]
Length = 896
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G NFRH +YP YK RPP + + ++ L IKAM + ++
Sbjct: 61 IFDAKGKNFRHEMYPQYKATRPPMEEDLKVQIEPLHEVIKAMGLPLL 107
>gi|322514149|ref|ZP_08067216.1| DNA-directed DNA polymerase I [Actinobacillus ureae ATCC 25976]
gi|322119989|gb|EFX91987.1| DNA-directed DNA polymerase I [Actinobacillus ureae ATCC 25976]
Length = 957
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDNLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|121999199|ref|YP_001003986.1| DNA polymerase I [Halorhodospira halophila SL1]
gi|121590604|gb|ABM63184.1| DNA polymerase I [Halorhodospira halophila SL1]
Length = 904
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK +RPP PD + + LKA I A+ + V+EV
Sbjct: 60 VFDAPGKTFRDELFEQYKAHRPPMPDELRAQREPLKAIIAALGVPVLEV 108
>gi|118595288|ref|ZP_01552635.1| DNA polymerase I [Methylophilales bacterium HTCC2181]
gi|118441066|gb|EAV47693.1| DNA polymerase I [Methylophilales bacterium HTCC2181]
Length = 904
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 2 GESYGLLWRGFLSY--NIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDT 59
GE G+++ G L+ NI H Y +D ++ + D A G FR+ +Y YK NRP PD
Sbjct: 28 GEPTGVIY-GVLNMLRNI-HKQYPSDYSVCIFD---AKGKTFRNDIYTEYKANRPSMPDD 82
Query: 60 IVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
+ ++ LK +I AM +IE V +D G
Sbjct: 83 LACQIEPLKEAINAMGWPMLIESGVEADDVIG 114
>gi|438002756|ref|YP_007272499.1| DNA polymerase I [Tepidanaerobacter acetatoxydans Re1]
gi|432179550|emb|CCP26523.1| DNA polymerase I [Tepidanaerobacter acetatoxydans Re1]
Length = 347
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G FRH Y +YK RP TPD ++ LK +KA++I IE +
Sbjct: 61 GPTFRHDEYAAYKATRPKTPDELIGQFDILKEILKALNINFIEAD 105
>gi|346224772|ref|ZP_08845914.1| DNA polymerase I [Anaerophaga thermohalophila DSM 12881]
Length = 921
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G FR+ LY +YK NR TP+ I + + Y+K ++A +I +I+V+
Sbjct: 67 GPTFRNELYEAYKANREATPEDIKKAVPYIKKILEAFNINIIQVD 111
>gi|340351566|ref|ZP_08674478.1| DNA-directed DNA polymerase I [Prevotella pallens ATCC 700821]
gi|339617850|gb|EGQ22463.1| DNA-directed DNA polymerase I [Prevotella pallens ATCC 700821]
Length = 950
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G+ FRH YP YK R TP+ I + Y+K + AM I +++V+
Sbjct: 92 GLTFRHEAYPEYKAQREETPEDIKLSVPYIKQILGAMHIPILQVD 136
>gi|425307668|ref|ZP_18697330.1| DNA polymerase I [Escherichia coli N1]
gi|408224835|gb|EKI48537.1| DNA polymerase I [Escherichia coli N1]
Length = 928
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSSVEAD 115
>gi|21241682|ref|NP_641264.1| exodeoxyribonuclease IX [Xanthomonas axonopodis pv. citri str. 306]
gi|21107047|gb|AAM35800.1| exodeoxyribonuclease IX [Xanthomonas axonopodis pv. citri str. 306]
Length = 328
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHAIYPAYKGNRTPAPDALRRQFAHCKALCAALGLSVL 121
>gi|78046504|ref|YP_362679.1| exodeoxyribonuclease IX [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78034934|emb|CAJ22579.1| exodeoxyribonuclease IX [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 328
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHAIYPAYKGNRTPAPDALRRQFAHCKALCAALGLSVL 121
>gi|381172785|ref|ZP_09881904.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|380686776|emb|CCG38391.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Xanthomonas citri pv. mangiferaeindicae LMG 941]
Length = 328
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHAIYPAYKGNRTPAPDALRRQFAHCKALCAALGLSVL 121
>gi|390989826|ref|ZP_10260120.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|372555486|emb|CCF67095.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Xanthomonas axonopodis pv. punicae str. LMG 859]
Length = 328
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHAIYPAYKGNRTPAPDALRRQFAHCKALCAALGLSVL 121
>gi|346723825|ref|YP_004850494.1| exodeoxyribonuclease IX [Xanthomonas axonopodis pv. citrumelo F1]
gi|346648572|gb|AEO41196.1| exodeoxyribonuclease IX [Xanthomonas axonopodis pv. citrumelo F1]
Length = 328
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHAIYPAYKGNRTPAPDALRRQFAHCKALCAALGLSVL 121
>gi|325929428|ref|ZP_08190556.1| 5'-3' exonuclease (including N-terminal domain of PolI)
[Xanthomonas perforans 91-118]
gi|325540203|gb|EGD11817.1| 5'-3' exonuclease (including N-terminal domain of PolI)
[Xanthomonas perforans 91-118]
Length = 328
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHAIYPAYKGNRTPAPDALRRQFAHCKALCAALGLSVL 121
>gi|294626134|ref|ZP_06704741.1| exodeoxyribonuclease IX [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294665198|ref|ZP_06730497.1| exodeoxyribonuclease IX [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292599583|gb|EFF43713.1| exodeoxyribonuclease IX [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292605021|gb|EFF48373.1| exodeoxyribonuclease IX [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 328
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHAIYPAYKGNRTPAPDALRRQFAHCKALCAALGLSVL 121
>gi|289670887|ref|ZP_06491962.1| exodeoxyribonuclease IX [Xanthomonas campestris pv. musacearum
NCPPB 4381]
Length = 328
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHAIYPAYKGNRTPAPDALRRQFAHCKALCAALGLSVL 121
>gi|289663503|ref|ZP_06485084.1| exodeoxyribonuclease IX [Xanthomonas campestris pv. vasculorum
NCPPB 702]
Length = 328
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHAIYPAYKGNRTPAPDALRRQFAHCKALCAALGLSVL 121
>gi|167751303|ref|ZP_02423430.1| hypothetical protein EUBSIR_02289 [Eubacterium siraeum DSM 15702]
gi|167655810|gb|EDR99939.1| DNA-directed DNA polymerase [Eubacterium siraeum DSM 15702]
Length = 829
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FRH +Y YK NR P+ + Q L Y+K I AM I +IE
Sbjct: 60 ALTFRHKMYDGYKANRKGMPEDLAQQLPYMKKIITAMGITIIE 102
>gi|437930744|ref|ZP_20851122.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|435311919|gb|ELO85948.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
Length = 68
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 13 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 67
>gi|21230313|ref|NP_636230.1| exodeoxyribonuclease IX [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66769693|ref|YP_244455.1| exodeoxyribonuclease IX [Xanthomonas campestris pv. campestris str.
8004]
gi|21111863|gb|AAM40154.1| exodeoxyribonuclease IX [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66575025|gb|AAY50435.1| exodeoxyribonuclease IX [Xanthomonas campestris pv. campestris str.
8004]
Length = 332
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 75 ITIAFDEALDSC---FRHAIYPAYKGNREPAPDALRRQFAHCKALCAALGLSVL 125
>gi|384426704|ref|YP_005636061.1| exodeoxyribonuclease IX [Xanthomonas campestris pv. raphani 756C]
gi|341935804|gb|AEL05943.1| exodeoxyribonuclease IX [Xanthomonas campestris pv. raphani 756C]
Length = 332
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 75 ITIAFDEALDSC---FRHAIYPAYKGNREPAPDALRRQFAHCKALCAALGLSVL 125
>gi|325914281|ref|ZP_08176631.1| 5'-3' exonuclease (including N-terminal domain of PolI)
[Xanthomonas vesicatoria ATCC 35937]
gi|325539536|gb|EGD11182.1| 5'-3' exonuclease (including N-terminal domain of PolI)
[Xanthomonas vesicatoria ATCC 35937]
Length = 328
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 71 ITIAFDEALDSC---FRHAIYPAYKGNREPAPDALRRQFAHCKALCAALGLSVL 121
>gi|254466222|ref|ZP_05079633.1| DNA polymerase I superfamily [Rhodobacterales bacterium Y4I]
gi|206687130|gb|EDZ47612.1| DNA polymerase I superfamily [Rhodobacterales bacterium Y4I]
Length = 936
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 20 DTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
D D V ++ GM+FR+ +Y YK NRPP P+ +V + + KA +I
Sbjct: 56 DNKGPDAPTHVAVIFDHSGMSFRNEMYDQYKANRPPAPEDLVPQFPLTREATKAFNIACK 115
Query: 80 EV 81
EV
Sbjct: 116 EV 117
>gi|188992907|ref|YP_001904917.1| Exodeoxyribonuclease IX [Xanthomonas campestris pv. campestris str.
B100]
gi|167734667|emb|CAP52877.1| Exodeoxyribonuclease IX [Xanthomonas campestris pv. campestris]
Length = 332
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
IT+ + +C FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 75 ITIAFDEALDSC---FRHAIYPAYKGNREPAPDALRRQFAHCKALCAALGLSVL 125
>gi|241763714|ref|ZP_04761762.1| DNA polymerase I [Acidovorax delafieldii 2AN]
gi|241367019|gb|EER61404.1| DNA polymerase I [Acidovorax delafieldii 2AN]
Length = 926
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 23 MTDITLDVHDLYGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK 77
M + +VH Y AC G FR T+YP+YK R P PD + + + ++ + K
Sbjct: 48 MQALRKEVHADYAACVFDAKGPTFRDTIYPAYKQQRSPMPDDLRTQIAPIHEVVRLLGWK 107
Query: 78 VIEV 81
V++V
Sbjct: 108 VLDV 111
>gi|223999787|ref|XP_002289566.1| hypothetical protein THAPSDRAFT_262348 [Thalassiosira pseudonana
CCMP1335]
gi|220974774|gb|EED93103.1| hypothetical protein THAPSDRAFT_262348 [Thalassiosira pseudonana
CCMP1335]
Length = 249
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G NFRH +YP YK NR P P+ +V + ++ + +A I +E
Sbjct: 62 GPNFRHEIYPEYKANRGPCPEDLVPQFELVREAAEAFGIVQVEAE 106
>gi|397641007|gb|EJK74429.1| hypothetical protein THAOC_03891 [Thalassiosira oceanica]
Length = 700
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
++ + G NFRH LYP YK NR P P+ ++ +K + A + IE
Sbjct: 411 VFDSKGPNFRHELYPEYKANRGPCPEDLIPQFALVKEAATAFGLPQIE 458
>gi|114330791|ref|YP_747013.1| DNA polymerase I [Nitrosomonas eutropha C91]
gi|114307805|gb|ABI59048.1| DNA polymerase I [Nitrosomonas eutropha C91]
Length = 906
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYED 87
Y AC G FR +YP YK NRPP P + + L A I+AM ++E V +D
Sbjct: 52 YSACVFDAKGKTFREEIYPQYKANRPPMPADLAGQINPLYACIRAMGWPLLVEEQVEADD 111
Query: 88 AYG 90
G
Sbjct: 112 VIG 114
>gi|387132501|ref|YP_006298473.1| DNA-directed DNA polymerase [Prevotella intermedia 17]
gi|386375349|gb|AFJ08547.1| DNA-directed DNA polymerase [Prevotella intermedia 17]
Length = 920
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G+ FRH +P YK R TP+ I + Y+K ++AM I +++V+
Sbjct: 62 GLTFRHEAFPEYKAQREETPEDIKLSVPYIKQILEAMRIPILQVD 106
>gi|336450406|ref|ZP_08620857.1| DNA polymerase I [Idiomarina sp. A28L]
gi|336282801|gb|EGN76022.1| DNA polymerase I [Idiomarina sp. A28L]
Length = 944
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + ++ L I+AM + +I + + D
Sbjct: 61 VFDAKGGTFRNEMYAEYKANRPPMPDDLRSQIEPLHNIIRAMGLPLISIEGVEAD 115
>gi|163857439|ref|YP_001631736.1| DNA polymerase I [Bordetella petrii DSM 12804]
gi|163261167|emb|CAP43469.1| DNA polymerase I [Bordetella petrii]
Length = 948
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP YK++RPP P+ + ++ + +++A+ +V+ + + D
Sbjct: 96 YAACIFDARGKTFRDDLYPDYKSHRPPMPEDLAAQIEPIHQAVRALGWQVLAIEGVEAD 154
>gi|340350278|ref|ZP_08673274.1| DNA-directed DNA polymerase I [Prevotella nigrescens ATCC 33563]
gi|339608807|gb|EGQ13691.1| DNA-directed DNA polymerase I [Prevotella nigrescens ATCC 33563]
Length = 942
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G+ FRH +P YK R TP+ I + Y+K ++AM I +++V+
Sbjct: 83 GLTFRHEAFPEYKAQREETPEDIKLSVPYIKQILEAMRIPILQVD 127
>gi|333981901|ref|YP_004511111.1| DNA polymerase I [Methylomonas methanica MC09]
gi|333805942|gb|AEF98611.1| DNA polymerase I [Methylomonas methanica MC09]
Length = 918
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FRH LY YK +RPP PD + ++ L I+A+ + +IE V +D G
Sbjct: 61 VFDAPGKTFRHDLYDQYKAHRPPMPDDLRVQIEPLHELIRALGLPLIIEHGVEADDVLG 119
>gi|58584982|ref|YP_198555.1| DNA polymerase I [Wolbachia endosymbiont strain TRS of Brugia
malayi]
gi|58419298|gb|AAW71313.1| DNA polymerase I, PolA [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 849
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 1 MGESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
+G YG L L Y I H Y+T I LD + NFRH LYP YK NR P+ +
Sbjct: 33 IGAVYGFL-NMVLKY-ITHSDYLT-IALD------SGKKNFRHDLYPEYKANRVTPPEGL 83
Query: 61 VQGLQYLKASIKAMSIKVIEV 81
+ L+ +I+A ++ E+
Sbjct: 84 IPQFTILREAIEAFNLSYEEI 104
>gi|445116818|ref|ZP_21378649.1| DNA polymerase I [Prevotella nigrescens F0103]
gi|444839987|gb|ELX67031.1| DNA polymerase I [Prevotella nigrescens F0103]
Length = 942
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G+ FRH +P YK R TP+ I + Y+K ++AM I +++V+
Sbjct: 83 GLTFRHEAFPEYKAQREETPEDIKLSVPYIKQILEAMRIPILQVD 127
>gi|421484077|ref|ZP_15931649.1| DNA polymerase I [Achromobacter piechaudii HLE]
gi|400197784|gb|EJO30748.1| DNA polymerase I [Achromobacter piechaudii HLE]
Length = 905
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP YK++RPP P+ + + ++ + +++A+ V+ + + D
Sbjct: 53 YAACIFDARGKTFRDDLYPEYKSHRPPMPEDLAEQIEPIHRAVRALGWPVLAIEGVEAD 111
>gi|387812902|ref|YP_005428379.1| DNA polymerase I [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381337909|emb|CCG93956.1| multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal);
3'->5' polymerase; 3'->5' exonuclease (C-terminal)
[Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 965
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FRH +Y YK NRPP PD + ++ + ++AM + ++ V
Sbjct: 118 VFDAKGKTFRHDMYEEYKANRPPMPDDLAVQIEPIHEIVRAMGLPLLIV 166
>gi|332799559|ref|YP_004461058.1| DNA polymerase I [Tepidanaerobacter acetatoxydans Re1]
gi|332697294|gb|AEE91751.1| DNA polymerase I [Tepidanaerobacter acetatoxydans Re1]
Length = 864
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G FRH Y +YK RP TPD ++ LK +KA++I IE +
Sbjct: 61 GPTFRHDEYAAYKATRPKTPDELIGQFDILKEILKALNINFIEAD 105
>gi|226327657|ref|ZP_03803175.1| hypothetical protein PROPEN_01529 [Proteus penneri ATCC 35198]
gi|225204183|gb|EEG86537.1| DNA-directed DNA polymerase [Proteus penneri ATCC 35198]
Length = 949
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR LY YK+NRPP PD + + + L ++AM + ++ ++ + D
Sbjct: 78 VFDAKGKTFRDELYEEYKSNRPPMPDDLREQIAPLHEMVQAMGLPLLSISGVEAD 132
>gi|419797919|ref|ZP_14323369.1| DNA-directed DNA polymerase [Neisseria sicca VK64]
gi|385696768|gb|EIG27236.1| DNA-directed DNA polymerase [Neisseria sicca VK64]
Length = 929
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 51 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 110
Query: 85 YEDAYG 90
+D G
Sbjct: 111 ADDVIG 116
>gi|340363286|ref|ZP_08685627.1| DNA-directed DNA polymerase I [Neisseria macacae ATCC 33926]
gi|339886227|gb|EGQ75895.1| DNA-directed DNA polymerase I [Neisseria macacae ATCC 33926]
Length = 668
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 74 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 133
Query: 85 YEDAYG 90
+D G
Sbjct: 134 ADDVIG 139
>gi|296314737|ref|ZP_06864678.1| DNA polymerase I [Neisseria polysaccharea ATCC 43768]
gi|296838474|gb|EFH22412.1| DNA polymerase I [Neisseria polysaccharea ATCC 43768]
Length = 930
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 52 VHDYCVVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 111
Query: 85 YEDAYG 90
+D G
Sbjct: 112 ADDVIG 117
>gi|255067522|ref|ZP_05319377.1| DNA polymerase I [Neisseria sicca ATCC 29256]
gi|255048317|gb|EET43781.1| DNA polymerase I [Neisseria sicca ATCC 29256]
Length = 952
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 74 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 133
Query: 85 YEDAYG 90
+D G
Sbjct: 134 ADDVIG 139
>gi|241758960|ref|ZP_04757072.1| DNA polymerase I [Neisseria flavescens SK114]
gi|241320781|gb|EER57014.1| DNA polymerase I [Neisseria flavescens SK114]
Length = 935
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 52 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 111
Query: 85 YEDAYG 90
+D G
Sbjct: 112 ADDVIG 117
>gi|261379438|ref|ZP_05984011.1| DNA polymerase I [Neisseria subflava NJ9703]
gi|284797890|gb|EFC53237.1| DNA polymerase I [Neisseria subflava NJ9703]
Length = 938
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 53 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 112
Query: 85 YEDAYG 90
+D G
Sbjct: 113 ADDVIG 118
>gi|261364888|ref|ZP_05977771.1| DNA polymerase I [Neisseria mucosa ATCC 25996]
gi|288566937|gb|EFC88497.1| DNA polymerase I [Neisseria mucosa ATCC 25996]
Length = 933
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 51 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 110
Query: 85 YEDAYG 90
+D G
Sbjct: 111 ADDVIG 116
>gi|225023896|ref|ZP_03713088.1| hypothetical protein EIKCOROL_00762 [Eikenella corrodens ATCC
23834]
gi|224943370|gb|EEG24579.1| hypothetical protein EIKCOROL_00762 [Eikenella corrodens ATCC
23834]
Length = 928
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 50 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 109
Query: 85 YEDAYG 90
+D G
Sbjct: 110 ADDVIG 115
>gi|449134849|ref|ZP_21770315.1| DNA polymerase I [Rhodopirellula europaea 6C]
gi|448886476|gb|EMB16881.1| DNA polymerase I [Rhodopirellula europaea 6C]
Length = 1071
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ LYP YK NR PD + Q + ++ +I AM I +IE
Sbjct: 232 VTFRNELYPEYKANRDSMPDELRQQIPLIRQAIDAMGIGIIE 273
>gi|440718089|ref|ZP_20898553.1| DNA polymerase I [Rhodopirellula baltica SWK14]
gi|436436631|gb|ELP30351.1| DNA polymerase I [Rhodopirellula baltica SWK14]
Length = 1071
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ LYP YK NR PD + Q + ++ +I AM I +IE
Sbjct: 232 VTFRNELYPEYKANRDSMPDELRQQIPLIRQAIDAMGIGIIE 273
>gi|32477714|ref|NP_870708.1| DNA polymerase I [Rhodopirellula baltica SH 1]
gi|32448268|emb|CAD77785.1| DNA polymerase I [Rhodopirellula baltica SH 1]
Length = 1027
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ LYP YK NR PD + Q + ++ +I AM I +IE
Sbjct: 188 VTFRNELYPEYKANRDSMPDELRQQIPLIRQAIDAMGIGIIE 229
>gi|421611872|ref|ZP_16053001.1| DNA polymerase I [Rhodopirellula baltica SH28]
gi|408497339|gb|EKK01869.1| DNA polymerase I [Rhodopirellula baltica SH28]
Length = 1071
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ LYP YK NR PD + Q + ++ +I AM I +IE
Sbjct: 232 VTFRNELYPEYKANRDSMPDELRQQIPLIRQAIDAMGIGIIE 273
>gi|417305802|ref|ZP_12092746.1| DNA polymerase I [Rhodopirellula baltica WH47]
gi|327537894|gb|EGF24594.1| DNA polymerase I [Rhodopirellula baltica WH47]
Length = 975
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ LYP YK NR PD + Q + ++ +I AM I +IE
Sbjct: 136 VTFRNELYPEYKANRDSMPDELRQQIPLIRQAIDAMGIGIIE 177
>gi|298369714|ref|ZP_06981031.1| DNA polymerase I [Neisseria sp. oral taxon 014 str. F0314]
gi|298282271|gb|EFI23759.1| DNA polymerase I [Neisseria sp. oral taxon 014 str. F0314]
Length = 929
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 51 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 110
Query: 85 YEDAYG 90
+D G
Sbjct: 111 ADDVIG 116
>gi|333376435|ref|ZP_08468214.1| DNA-directed DNA polymerase I [Kingella kingae ATCC 23330]
gi|332967940|gb|EGK07028.1| DNA-directed DNA polymerase I [Kingella kingae ATCC 23330]
Length = 925
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G NFRH LY YK RPP PD + L + M KV++++ + D
Sbjct: 58 VFDAKGKNFRHALYEDYKATRPPMPDELRPQADMLPDLVDLMGWKVLKISGVEAD 112
>gi|311105001|ref|YP_003977854.1| DNA polymerase I [Achromobacter xylosoxidans A8]
gi|310759690|gb|ADP15139.1| DNA polymerase I [Achromobacter xylosoxidans A8]
Length = 905
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP YK++RPP P+ + ++ + ++++A+ V+ + + D
Sbjct: 53 YAACIFDARGKTFRDDLYPEYKSHRPPMPEDLAAQIEPIHSAVRALGWPVLAIEGVEAD 111
>gi|51244939|ref|YP_064823.1| DNA polymerase I [Desulfotalea psychrophila LSv54]
gi|50875976|emb|CAG35816.1| probable DNA polymerase I [Desulfotalea psychrophila LSv54]
Length = 889
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
G FRH +YP YK NRP P+ + + + Y+K +KA + ++E
Sbjct: 62 GPVFRHEMYPKYKANRPMMPEDLQEQIPYIKEFVKASGLLLLE 104
>gi|407692488|ref|YP_006817277.1| DNA polymerase I [Actinobacillus suis H91-0380]
gi|407388545|gb|AFU19038.1| DNA polymerase I [Actinobacillus suis H91-0380]
Length = 957
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|384253483|gb|EIE26958.1| hypothetical protein COCSUDRAFT_27331 [Coccomyxa subellipsoidea
C-169]
Length = 426
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 4 SYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQG 63
SYG L I+ + +D H G FRH LY YK RPP PD +
Sbjct: 162 SYGFLSTVLRLLEIKEPPTHFAVVMDHH------GKTFRHELYSDYKAQRPPMPDAMKLA 215
Query: 64 LQYLKASIKAMSIKVIEV 81
+ ++A ++ + I V+ V
Sbjct: 216 IPKIQALLEILGIPVLRV 233
>gi|307260958|ref|ZP_07542640.1| hypothetical protein appser12_5250 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869260|gb|EFN01055.1| hypothetical protein appser12_5250 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 957
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|307256528|ref|ZP_07538309.1| hypothetical protein appser10_5330 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864938|gb|EFM96840.1| hypothetical protein appser10_5330 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 957
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|307254261|ref|ZP_07536102.1| hypothetical protein appser9_5120 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258723|ref|ZP_07540455.1| hypothetical protein appser11_5210 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306862808|gb|EFM94761.1| hypothetical protein appser9_5120 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867074|gb|EFM98930.1| hypothetical protein appser11_5210 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 957
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|307249707|ref|ZP_07531687.1| hypothetical protein appser4_5110 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858273|gb|EFM90349.1| hypothetical protein appser4_5110 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 686
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|307245312|ref|ZP_07527400.1| hypothetical protein appser1_5170 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306853653|gb|EFM85870.1| hypothetical protein appser1_5170 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 957
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|303250265|ref|ZP_07336465.1| DNA polymerase I [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307252030|ref|ZP_07533930.1| hypothetical protein appser6_5490 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302650881|gb|EFL81037.1| DNA polymerase I [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306860499|gb|EFM92512.1| hypothetical protein appser6_5490 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 957
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|303252143|ref|ZP_07338311.1| DNA polymerase I [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|307247479|ref|ZP_07529524.1| hypothetical protein appser2_4750 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302648926|gb|EFL79114.1| DNA polymerase I [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|306855982|gb|EFM88140.1| hypothetical protein appser2_4750 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 957
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|257464896|ref|ZP_05629267.1| DNA polymerase I [Actinobacillus minor 202]
gi|257450556|gb|EEV24599.1| DNA polymerase I [Actinobacillus minor 202]
Length = 950
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|240949360|ref|ZP_04753702.1| DNA polymerase I [Actinobacillus minor NM305]
gi|240296210|gb|EER46863.1| DNA polymerase I [Actinobacillus minor NM305]
Length = 950
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|261378116|ref|ZP_05982689.1| DNA polymerase I [Neisseria cinerea ATCC 14685]
gi|269145571|gb|EEZ71989.1| DNA polymerase I [Neisseria cinerea ATCC 14685]
Length = 930
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 52 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 111
Query: 85 YEDAYG 90
+D G
Sbjct: 112 ADDVIG 117
>gi|190149819|ref|YP_001968344.1| DNA polymerase I [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|307263139|ref|ZP_07544760.1| hypothetical protein appser13_5610 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914950|gb|ACE61202.1| DNA polymerase I (POL I) [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|306871501|gb|EFN03224.1| hypothetical protein appser13_5610 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 957
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|165975932|ref|YP_001651525.1| DNA polymerase I [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|165876033|gb|ABY69081.1| DNA polymerase I [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
Length = 919
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 23 VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 77
>gi|288941214|ref|YP_003443454.1| DNA polymerase I [Allochromatium vinosum DSM 180]
gi|288896586|gb|ADC62422.1| DNA polymerase I [Allochromatium vinosum DSM 180]
Length = 911
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FRH YP YK NRP P+ + ++ L+ I+AM + ++ V
Sbjct: 59 VFDAGGRGFRHDRYPDYKANRPAMPEDLRAQIEPLRTIIRAMGLPLLVV 107
>gi|120553478|ref|YP_957829.1| DNA polymerase I [Marinobacter aquaeolei VT8]
gi|120323327|gb|ABM17642.1| DNA polymerase I [Marinobacter aquaeolei VT8]
Length = 908
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FRH +Y YK NRPP PD + ++ + ++AM + ++ V
Sbjct: 61 VFDAKGKTFRHDMYEEYKANRPPMPDDLAVQIEPIHEIVRAMGLPLLIV 109
>gi|319638957|ref|ZP_07993715.1| DNA polymerase I [Neisseria mucosa C102]
gi|317399861|gb|EFV80524.1| DNA polymerase I [Neisseria mucosa C102]
Length = 930
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 53 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 112
Query: 85 YEDAYG 90
+D G
Sbjct: 113 ADDVIG 118
>gi|294668660|ref|ZP_06733756.1| DNA polymerase I [Neisseria elongata subsp. glycolytica ATCC 29315]
gi|291309422|gb|EFE50665.1| DNA polymerase I [Neisseria elongata subsp. glycolytica ATCC 29315]
Length = 958
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 80 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 139
Query: 85 YEDAYG 90
+D G
Sbjct: 140 ADDVIG 145
>gi|395234013|ref|ZP_10412244.1| DNA polymerase I [Enterobacter sp. Ag1]
gi|394731379|gb|EJF31160.1| DNA polymerase I [Enterobacter sp. Ag1]
Length = 928
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEDYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|327312866|ref|YP_004328303.1| DNA-directed DNA polymerase [Prevotella denticola F0289]
gi|326945701|gb|AEA21586.1| DNA-directed DNA polymerase [Prevotella denticola F0289]
Length = 920
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G FRH ++P+YK R TP+ I Q + +K ++AM I +++V+
Sbjct: 62 GKTFRHEVFPAYKAQREETPEDIRQSVPIIKQILEAMRIPILQVD 106
>gi|325859715|ref|ZP_08172845.1| DNA-directed DNA polymerase [Prevotella denticola CRIS 18C-A]
gi|325482641|gb|EGC85644.1| DNA-directed DNA polymerase [Prevotella denticola CRIS 18C-A]
Length = 920
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G FRH ++P+YK R TP+ I Q + +K ++AM I +++V+
Sbjct: 62 GKTFRHEVFPAYKAQREETPEDIRQSVPIIKQILEAMRIPILQVD 106
>gi|392553088|ref|ZP_10300225.1| DNA polymerase I [Pseudoalteromonas spongiae UST010723-006]
Length = 912
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR+ +Y YK NRPP PD + ++ + IKAM + +I +
Sbjct: 61 IFDAKGPTFRNDMYSEYKANRPPMPDDLRTQIEPIHNIIKAMGLPLISI 109
>gi|349610431|ref|ZP_08889780.1| hypothetical protein HMPREF1028_01755, partial [Neisseria sp.
GT4A_CT1]
gi|348609981|gb|EGY59691.1| hypothetical protein HMPREF1028_01755 [Neisseria sp. GT4A_CT1]
Length = 849
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++P YK RPP PD + + L ++ M V+ + V
Sbjct: 51 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 110
Query: 85 YEDAYG 90
+D G
Sbjct: 111 ADDVIG 116
>gi|414071039|ref|ZP_11407015.1| DNA polymerase I [Pseudoalteromonas sp. Bsw20308]
gi|410806545|gb|EKS12535.1| DNA polymerase I [Pseudoalteromonas sp. Bsw20308]
Length = 911
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + + + IKAM +I + + D
Sbjct: 61 IFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEAD 115
>gi|389872699|ref|YP_006380118.1| DNA polymerase I [Advenella kashmirensis WT001]
gi|388537948|gb|AFK63136.1| DNA polymerase I [Advenella kashmirensis WT001]
Length = 865
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
Y AC G FR LYP YK +RPP PD + + +I+AM VI
Sbjct: 13 YAACIFDAKGKTFRDDLYPEYKGDRPPMPDDLAVQTGPIHEAIRAMGWPVI 63
>gi|148244250|ref|YP_001218944.1| DNA polymerase I [Candidatus Vesicomyosocius okutanii HA]
gi|146326077|dbj|BAF61220.1| DNA polymerase I [Candidatus Vesicomyosocius okutanii HA]
Length = 909
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G NFRH +YP YK NR P +V ++ L I+AM I I V+ + D
Sbjct: 59 IFDARGKNFRHNIYPQYKANRKPIDGGLVVQIEPLYEMIQAMGIHFICVSKVEAD 113
>gi|359455121|ref|ZP_09244368.1| DNA polymerase I [Pseudoalteromonas sp. BSi20495]
gi|358047836|dbj|GAA80617.1| DNA polymerase I [Pseudoalteromonas sp. BSi20495]
Length = 911
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + + + IKAM +I + + D
Sbjct: 61 IFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEAD 115
>gi|359441073|ref|ZP_09230978.1| DNA polymerase I [Pseudoalteromonas sp. BSi20429]
gi|358037086|dbj|GAA67227.1| DNA polymerase I [Pseudoalteromonas sp. BSi20429]
Length = 911
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + + + IKAM +I + + D
Sbjct: 61 IFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEAD 115
>gi|42520815|ref|NP_966730.1| DNA polymerase I [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410555|gb|AAS14664.1| DNA polymerase I [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 858
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 1 MGESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
+G YG L L Y I H Y+T I LD A NFRH LYP YK NR P+ +
Sbjct: 33 IGGVYGFL-NMVLKY-IAHSDYLT-IALD------AGKKNFRHNLYPEYKANRVTPPEDL 83
Query: 61 VQGLQYLKASIKAMSIKVIEV 81
L+ +++A ++ E+
Sbjct: 84 TPQFTILREAVEAFNLSYEEI 104
>gi|332533751|ref|ZP_08409609.1| DNA polymerase I [Pseudoalteromonas haloplanktis ANT/505]
gi|332036806|gb|EGI73268.1| DNA polymerase I [Pseudoalteromonas haloplanktis ANT/505]
Length = 911
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + + + IKAM +I + + D
Sbjct: 61 IFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEAD 115
>gi|425214533|ref|ZP_18609919.1| DNA polymerase I [Escherichia coli PA4]
gi|429004782|ref|ZP_19072824.1| DNA polymerase I [Escherichia coli 95.0183]
gi|429017283|ref|ZP_19084142.1| DNA polymerase I [Escherichia coli 95.0943]
gi|429029206|ref|ZP_19095160.1| DNA polymerase I [Escherichia coli 96.0427]
gi|429069914|ref|ZP_19133334.1| DNA polymerase I [Escherichia coli 99.0672]
gi|408124908|gb|EKH55551.1| DNA polymerase I [Escherichia coli PA4]
gi|427255635|gb|EKW21884.1| DNA polymerase I [Escherichia coli 95.0183]
gi|427257250|gb|EKW23381.1| DNA polymerase I [Escherichia coli 95.0943]
gi|427274650|gb|EKW39297.1| DNA polymerase I [Escherichia coli 96.0427]
gi|427315289|gb|EKW77293.1| DNA polymerase I [Escherichia coli 99.0672]
Length = 890
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 23 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 77
>gi|392534064|ref|ZP_10281201.1| DNA polymerase I [Pseudoalteromonas arctica A 37-1-2]
Length = 911
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + + + IKAM +I + + D
Sbjct: 61 IFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEAD 115
>gi|417265202|ref|ZP_12052581.1| DNA-directed DNA polymerase [Escherichia coli 2.3916]
gi|417269615|ref|ZP_12056975.1| DNA-directed DNA polymerase [Escherichia coli 3.3884]
gi|418269932|ref|ZP_12888109.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Shigella sonnei str. Moseley]
gi|420365930|ref|ZP_14866787.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Shigella sonnei 4822-66]
gi|425117487|ref|ZP_18519257.1| DNA polymerase I [Escherichia coli 8.0566]
gi|386221384|gb|EII43828.1| DNA-directed DNA polymerase [Escherichia coli 2.3916]
gi|386228420|gb|EII55776.1| DNA-directed DNA polymerase [Escherichia coli 3.3884]
gi|391291565|gb|EIQ49957.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Shigella sonnei 4822-66]
gi|397894964|gb|EJL11400.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Shigella sonnei str. Moseley]
gi|408562761|gb|EKK38913.1| DNA polymerase I [Escherichia coli 8.0566]
Length = 884
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 71
>gi|386707120|ref|YP_006170967.1| DNA polymerase I [Escherichia coli P12b]
gi|383105288|gb|AFG42797.1| DNA polymerase I [Escherichia coli P12b]
Length = 890
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 23 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 77
>gi|419161731|ref|ZP_13706219.1| DNA polymerase I [Escherichia coli DEC6D]
gi|378003444|gb|EHV66486.1| DNA polymerase I [Escherichia coli DEC6D]
Length = 884
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 71
>gi|419072205|ref|ZP_13617801.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC3E]
gi|419083183|ref|ZP_13628623.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC4A]
gi|419134157|ref|ZP_13678976.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC5D]
gi|425112742|ref|ZP_18514646.1| DNA polymerase I [Escherichia coli 6.0172]
gi|425128672|ref|ZP_18529825.1| DNA polymerase I [Escherichia coli 8.0586]
gi|425146707|ref|ZP_18546683.1| DNA polymerase I [Escherichia coli 10.0869]
gi|429041456|ref|ZP_19106527.1| DNA polymerase I [Escherichia coli 96.0932]
gi|429835584|ref|ZP_19365808.1| DNA polymerase I [Escherichia coli 97.0010]
gi|444938760|ref|ZP_21257479.1| DNA polymerase I [Escherichia coli 99.0815]
gi|444949746|ref|ZP_21268026.1| DNA polymerase I [Escherichia coli 99.0839]
gi|444982718|ref|ZP_21299612.1| DNA polymerase I [Escherichia coli ATCC 700728]
gi|444998644|ref|ZP_21315132.1| DNA polymerase I [Escherichia coli PA13]
gi|445020608|ref|ZP_21336561.1| DNA polymerase I [Escherichia coli PA8]
gi|445036896|ref|ZP_21352410.1| DNA polymerase I [Escherichia coli 99.1762]
gi|445047731|ref|ZP_21362967.1| DNA polymerase I [Escherichia coli 3.4880]
gi|377906185|gb|EHU70434.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC3E]
gi|377922815|gb|EHU86790.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC4A]
gi|377969840|gb|EHV33214.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC5D]
gi|408545643|gb|EKK23069.1| DNA polymerase I [Escherichia coli 6.0172]
gi|408563281|gb|EKK39418.1| DNA polymerase I [Escherichia coli 8.0586]
gi|408588188|gb|EKK62776.1| DNA polymerase I [Escherichia coli 10.0869]
gi|427288784|gb|EKW52385.1| DNA polymerase I [Escherichia coli 96.0932]
gi|429251051|gb|EKY35679.1| DNA polymerase I [Escherichia coli 97.0010]
gi|444545040|gb|ELV23997.1| DNA polymerase I [Escherichia coli 99.0815]
gi|444554468|gb|ELV32031.1| DNA polymerase I [Escherichia coli 99.0839]
gi|444588930|gb|ELV64287.1| DNA polymerase I [Escherichia coli ATCC 700728]
gi|444602936|gb|ELV77653.1| DNA polymerase I [Escherichia coli PA13]
gi|444626411|gb|ELW00205.1| DNA polymerase I [Escherichia coli PA8]
gi|444641769|gb|ELW14987.1| DNA polymerase I [Escherichia coli 99.1762]
gi|444656833|gb|ELW29341.1| DNA polymerase I [Escherichia coli 3.4880]
Length = 884
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 71
>gi|359431675|ref|ZP_09222097.1| DNA polymerase I [Pseudoalteromonas sp. BSi20652]
gi|357921674|dbj|GAA58346.1| DNA polymerase I [Pseudoalteromonas sp. BSi20652]
Length = 911
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + + + IKAM +I + + D
Sbjct: 61 IFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEAD 115
>gi|345875809|ref|ZP_08827598.1| DNA polymerase I [Neisseria weaveri LMG 5135]
gi|343968507|gb|EGV36735.1| DNA polymerase I [Neisseria weaveri LMG 5135]
Length = 907
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH +YP YK RPP P + + L ++ M V+ V +V
Sbjct: 30 VHDYCAVVFDAKGENFRHKMYPDYKATRPPMPGELRPQAEMLPELVRLMGWPVLIVPDVE 89
Query: 85 YEDAYG 90
+D G
Sbjct: 90 ADDVIG 95
>gi|417745487|ref|ZP_12394006.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Shigella flexneri 2930-71]
gi|332764614|gb|EGJ94846.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Shigella flexneri 2930-71]
Length = 884
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 71
>gi|416778887|ref|ZP_11876137.1| DNA polymerase I [Escherichia coli O157:H7 str. G5101]
gi|320639201|gb|EFX08828.1| DNA polymerase I [Escherichia coli O157:H7 str. G5101]
Length = 916
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 49 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 103
>gi|416334848|ref|ZP_11671590.1| DNA polymerase I [Escherichia coli WV_060327]
gi|320196914|gb|EFW71536.1| DNA polymerase I [Escherichia coli WV_060327]
Length = 884
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 71
>gi|416279847|ref|ZP_11644992.1| DNA polymerase I [Shigella boydii ATCC 9905]
gi|320182134|gb|EFW57037.1| DNA polymerase I [Shigella boydii ATCC 9905]
Length = 884
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 71
>gi|440289773|ref|YP_007342538.1| DNA polymerase I family protein with 3'-5'-exonuclease and
polymerase domains [Enterobacteriaceae bacterium strain
FGI 57]
gi|440049295|gb|AGB80353.1| DNA polymerase I family protein with 3'-5'-exonuclease and
polymerase domains [Enterobacteriaceae bacterium strain
FGI 57]
Length = 930
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEDYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLMAVSGVEAD 115
>gi|333891503|ref|YP_004465378.1| DNA polymerase I [Alteromonas sp. SN2]
gi|332991521|gb|AEF01576.1| DNA polymerase I [Alteromonas sp. SN2]
Length = 935
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FR +Y YK NRPP P+ + ++ L IKAM + ++E V +D G
Sbjct: 61 IFDAKGKTFRDDIYEEYKANRPPMPEELRSQIEPLHTIIKAMGLPLIVESGVEADDVIG 119
>gi|429112264|ref|ZP_19174034.1| DNA polymerase I [Cronobacter malonaticus 507]
gi|426313421|emb|CCK00147.1| DNA polymerase I [Cronobacter malonaticus 507]
Length = 140
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|427430986|ref|ZP_18920682.1| DNA polymerase I [Caenispirillum salinarum AK4]
gi|425878163|gb|EKV26882.1| DNA polymerase I [Caenispirillum salinarum AK4]
Length = 941
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 29/43 (67%)
Query: 40 NFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
+FR+ YP YK +RPP PD ++ + ++ +++A ++ +E++
Sbjct: 63 SFRNDFYPEYKAHRPPPPDELIPQFELIREAVRAFNLPSVEMD 105
>gi|357060797|ref|ZP_09121561.1| hypothetical protein HMPREF9332_01118 [Alloprevotella rava F0323]
gi|355375630|gb|EHG22913.1| hypothetical protein HMPREF9332_01118 [Alloprevotella rava F0323]
Length = 921
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G FRH L+P YK R TP+ I + +K IKA I ++EV
Sbjct: 63 GQTFRHELFPEYKAQREATPEDIKMAVPIIKELIKAYRIPILEV 106
>gi|417337725|ref|ZP_12119780.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353563687|gb|EHC29967.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
Length = 484
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 71
>gi|375121444|ref|ZP_09766611.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|326625711|gb|EGE32056.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
Length = 884
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 71
>gi|423142479|ref|ZP_17130117.1| DNA-directed DNA polymerase [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
gi|379049692|gb|EHY67586.1| DNA-directed DNA polymerase [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
Length = 884
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 71
>gi|417377062|ref|ZP_12146078.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353591107|gb|EHC49462.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
Length = 483
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 71
>gi|432747854|ref|ZP_19982514.1| DNA polymerase I [Escherichia coli KTE43]
gi|431289005|gb|ELF79752.1| DNA polymerase I [Escherichia coli KTE43]
Length = 928
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|420338359|ref|ZP_14839915.1| exonuclease xni [Shigella flexneri K-315]
gi|391258473|gb|EIQ17572.1| exonuclease xni [Shigella flexneri K-315]
Length = 179
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN-VMYEDAYG 90
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ V +D G
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 75
>gi|417692309|ref|ZP_12341507.1| DNA polymerase I [Shigella boydii 5216-82]
gi|332084081|gb|EGI89286.1| DNA polymerase I [Shigella boydii 5216-82]
Length = 928
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|424818148|ref|ZP_18243299.1| DNA polymerase I [Escherichia fergusonii ECD227]
gi|325499168|gb|EGC97027.1| DNA polymerase I [Escherichia fergusonii ECD227]
Length = 928
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|422757343|ref|ZP_16811163.1| DNA polymerase I [Escherichia coli H263]
gi|323954361|gb|EGB50146.1| DNA polymerase I [Escherichia coli H263]
Length = 928
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|375129559|ref|YP_004991656.1| DNA polymerase I [Vibrio furnissii NCTC 11218]
gi|315178730|gb|ADT85644.1| DNA polymerase I [Vibrio furnissii NCTC 11218]
Length = 932
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR LYP YK RPP PD + ++ L I+AM + ++ + + D
Sbjct: 61 VFDAKGKTFRDELYPEYKAQRPPMPDDLRCQIEPLHNVIRAMGLPLLSIEGVEAD 115
>gi|260767538|ref|ZP_05876474.1| DNA polymerase I [Vibrio furnissii CIP 102972]
gi|260617438|gb|EEX42621.1| DNA polymerase I [Vibrio furnissii CIP 102972]
Length = 932
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR LYP YK RPP PD + ++ L I+AM + ++ + + D
Sbjct: 61 VFDAKGKTFRDELYPEYKAQRPPMPDDLRCQIEPLHNVIRAMGLPLLSIEGVEAD 115
>gi|445053310|ref|ZP_21368314.1| DNA polymerase I [Escherichia coli 95.0083]
gi|444659467|gb|ELW31882.1| DNA polymerase I [Escherichia coli 95.0083]
Length = 516
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|82778962|ref|YP_405311.1| DNA polymerase I [Shigella dysenteriae Sd197]
gi|309783771|ref|ZP_07678417.1| DNA polymerase I [Shigella dysenteriae 1617]
gi|81243110|gb|ABB63820.1| PolA [Shigella dysenteriae Sd197]
gi|308928354|gb|EFP73815.1| DNA polymerase I [Shigella dysenteriae 1617]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|423092820|ref|ZP_17080616.1| DNA polymerase I [Pseudomonas fluorescens Q2-87]
gi|397882290|gb|EJK98777.1| DNA polymerase I [Pseudomonas fluorescens Q2-87]
Length = 922
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR LY YK NRP PD + ++ L AS+KA+ ++ V NV +D G
Sbjct: 58 VFDAKGGTFRDALYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIG 116
>gi|423694546|ref|ZP_17669036.1| DNA-directed DNA polymerase [Pseudomonas fluorescens Q8r1-96]
gi|388004452|gb|EIK65765.1| DNA-directed DNA polymerase [Pseudomonas fluorescens Q8r1-96]
Length = 922
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR LY YK NRP PD + ++ L AS+KA+ ++ V NV +D G
Sbjct: 58 VFDAKGGTFRDALYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIG 116
>gi|377578488|ref|ZP_09807465.1| DNA polymerase I [Escherichia hermannii NBRC 105704]
gi|377540074|dbj|GAB52630.1| DNA polymerase I [Escherichia hermannii NBRC 105704]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|330806700|ref|YP_004351162.1| DNA polymerase I [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327374808|gb|AEA66158.1| DNA polymerase I [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 922
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR LY YK NRP PD + ++ L AS+KA+ ++ V NV +D G
Sbjct: 58 VFDAKGGTFRDALYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIG 116
>gi|422807554|ref|ZP_16855984.1| DNA polymerase I [Escherichia fergusonii B253]
gi|324111949|gb|EGC05929.1| DNA polymerase I [Escherichia fergusonii B253]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432878270|ref|ZP_20095680.1| DNA polymerase I [Escherichia coli KTE154]
gi|431417054|gb|ELG99524.1| DNA polymerase I [Escherichia coli KTE154]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432866921|ref|ZP_20089072.1| DNA polymerase I [Escherichia coli KTE146]
gi|431400647|gb|ELG84014.1| DNA polymerase I [Escherichia coli KTE146]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432817650|ref|ZP_20051399.1| DNA polymerase I [Escherichia coli KTE115]
gi|431359693|gb|ELG46319.1| DNA polymerase I [Escherichia coli KTE115]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432566241|ref|ZP_19802795.1| DNA polymerase I [Escherichia coli KTE51]
gi|431089336|gb|ELD95155.1| DNA polymerase I [Escherichia coli KTE51]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|419959557|ref|ZP_14475609.1| DNA polymerase I [Enterobacter cloacae subsp. cloacae GS1]
gi|388605455|gb|EIM34673.1| DNA polymerase I [Enterobacter cloacae subsp. cloacae GS1]
Length = 930
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|419926189|ref|ZP_14443990.1| DNA polymerase I [Escherichia coli 541-15]
gi|388383729|gb|EIL45478.1| DNA polymerase I [Escherichia coli 541-15]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417228878|ref|ZP_12030636.1| DNA-directed DNA polymerase [Escherichia coli 5.0959]
gi|386208213|gb|EII12718.1| DNA-directed DNA polymerase [Escherichia coli 5.0959]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|419166823|ref|ZP_13711269.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC6E]
gi|378005954|gb|EHV68945.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC6E]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|422976191|ref|ZP_16977027.1| DNA polymerase I [Escherichia coli TA124]
gi|371594184|gb|EHN83055.1| DNA polymerase I [Escherichia coli TA124]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|407466864|ref|YP_006786694.1| DNA polymerase I [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407484410|ref|YP_006781560.1| DNA polymerase I [Escherichia coli O104:H4 str. 2011C-3493]
gi|410484956|ref|YP_006772502.1| DNA polymerase I [Escherichia coli O104:H4 str. 2009EL-2050]
gi|417807549|ref|ZP_12454476.1| DNA polymerase I [Escherichia coli O104:H4 str. LB226692]
gi|417835288|ref|ZP_12481727.1| DNA polymerase I [Escherichia coli O104:H4 str. 01-09591]
gi|417867766|ref|ZP_12512800.1| polA [Escherichia coli O104:H4 str. C227-11]
gi|422990124|ref|ZP_16980896.1| DNA polymerase I [Escherichia coli O104:H4 str. C227-11]
gi|422997021|ref|ZP_16987783.1| DNA polymerase I [Escherichia coli O104:H4 str. C236-11]
gi|423002117|ref|ZP_16992868.1| DNA polymerase I [Escherichia coli O104:H4 str. 09-7901]
gi|423005772|ref|ZP_16996517.1| DNA polymerase I [Escherichia coli O104:H4 str. 04-8351]
gi|423012333|ref|ZP_17003065.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-3677]
gi|423021564|ref|ZP_17012269.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4404]
gi|423026721|ref|ZP_17017415.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4522]
gi|423032549|ref|ZP_17023235.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4623]
gi|423035424|ref|ZP_17026100.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423040545|ref|ZP_17031213.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423047230|ref|ZP_17037888.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423055768|ref|ZP_17044574.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423057772|ref|ZP_17046570.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4632 C5]
gi|429721605|ref|ZP_19256518.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-9450]
gi|429773681|ref|ZP_19305693.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02030]
gi|429778865|ref|ZP_19310829.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02033-1]
gi|429782700|ref|ZP_19314623.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02092]
gi|429788093|ref|ZP_19319978.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02093]
gi|429794532|ref|ZP_19326371.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02281]
gi|429800492|ref|ZP_19332279.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02318]
gi|429804104|ref|ZP_19335859.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02913]
gi|429808752|ref|ZP_19340466.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-03439]
gi|429814694|ref|ZP_19346362.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-04080]
gi|429819654|ref|ZP_19351282.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-03943]
gi|429905973|ref|ZP_19371947.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-9990]
gi|429910107|ref|ZP_19376067.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-9941]
gi|429916006|ref|ZP_19381950.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-4984]
gi|429921055|ref|ZP_19386980.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-5604]
gi|429926861|ref|ZP_19392771.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-4986]
gi|429930792|ref|ZP_19396691.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-4987]
gi|429937334|ref|ZP_19403219.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-4988]
gi|429943013|ref|ZP_19408884.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-5603]
gi|429945693|ref|ZP_19411552.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-6006]
gi|429953257|ref|ZP_19419100.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec12-0465]
gi|429956601|ref|ZP_19422431.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec12-0466]
gi|340731868|gb|EGR61007.1| DNA polymerase I [Escherichia coli O104:H4 str. 01-09591]
gi|340737807|gb|EGR72061.1| DNA polymerase I [Escherichia coli O104:H4 str. LB226692]
gi|341921055|gb|EGT70658.1| polA [Escherichia coli O104:H4 str. C227-11]
gi|354856874|gb|EHF17331.1| DNA polymerase I [Escherichia coli O104:H4 str. C236-11]
gi|354861191|gb|EHF21631.1| DNA polymerase I [Escherichia coli O104:H4 str. C227-11]
gi|354861483|gb|EHF21922.1| DNA polymerase I [Escherichia coli O104:H4 str. 04-8351]
gi|354869897|gb|EHF30303.1| DNA polymerase I [Escherichia coli O104:H4 str. 09-7901]
gi|354875826|gb|EHF36189.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-3677]
gi|354885105|gb|EHF45413.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4404]
gi|354888414|gb|EHF48671.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4522]
gi|354891932|gb|EHF52148.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4623]
gi|354903965|gb|EHF64061.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354907492|gb|EHF67552.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354909499|gb|EHF69530.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354911776|gb|EHF71779.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4632 C4]
gi|354919965|gb|EHF79902.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-4632 C5]
gi|406780118|gb|AFS59542.1| DNA polymerase I [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407056707|gb|AFS76758.1| DNA polymerase I [Escherichia coli O104:H4 str. 2011C-3493]
gi|407062899|gb|AFS83946.1| DNA polymerase I [Escherichia coli O104:H4 str. 2009EL-2071]
gi|429354859|gb|EKY91554.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02030]
gi|429355601|gb|EKY92288.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02033-1]
gi|429356432|gb|EKY93108.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02092]
gi|429370601|gb|EKZ07165.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02093]
gi|429371061|gb|EKZ07621.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02281]
gi|429375284|gb|EKZ11821.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02318]
gi|429386722|gb|EKZ23168.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-02913]
gi|429389099|gb|EKZ25521.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-03439]
gi|429390208|gb|EKZ26623.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-03943]
gi|429399768|gb|EKZ36087.1| DNA polymerase I [Escherichia coli O104:H4 str. 11-04080]
gi|429401695|gb|EKZ37992.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-9990]
gi|429404298|gb|EKZ40575.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-9450]
gi|429412555|gb|EKZ48748.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-4984]
gi|429415275|gb|EKZ51441.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-4986]
gi|429422791|gb|EKZ58902.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-4987]
gi|429427372|gb|EKZ63456.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-4988]
gi|429431632|gb|EKZ67678.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437903|gb|EKZ73898.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-5604]
gi|429442252|gb|EKZ78210.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec12-0465]
gi|429447423|gb|EKZ83342.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-6006]
gi|429454111|gb|EKZ89976.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec12-0466]
gi|429458402|gb|EKZ94227.1| DNA polymerase I [Escherichia coli O104:H4 str. Ec11-9941]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|422764510|ref|ZP_16818259.1| DNA polymerase I [Escherichia coli E1167]
gi|324115642|gb|EGC09580.1| DNA polymerase I [Escherichia coli E1167]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417116344|ref|ZP_11967205.1| DNA-directed DNA polymerase [Escherichia coli 1.2741]
gi|422803142|ref|ZP_16851632.1| DNA polymerase I [Escherichia coli M863]
gi|323964211|gb|EGB59694.1| DNA polymerase I [Escherichia coli M863]
gi|386138888|gb|EIG80043.1| DNA-directed DNA polymerase [Escherichia coli 1.2741]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|416801966|ref|ZP_11885918.1| DNA polymerase I [Escherichia coli O157:H- str. H 2687]
gi|320649913|gb|EFX18421.1| DNA polymerase I [Escherichia coli O157:H- str. H 2687]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|331685599|ref|ZP_08386182.1| DNA polymerase I (POL I) [Escherichia coli H299]
gi|450195819|ref|ZP_21892662.1| DNA polymerase I [Escherichia coli SEPT362]
gi|331077070|gb|EGI48285.1| DNA polymerase I (POL I) [Escherichia coli H299]
gi|449315924|gb|EMD06050.1| DNA polymerase I [Escherichia coli SEPT362]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|331665510|ref|ZP_08366408.1| DNA polymerase I (POL I) [Escherichia coli TA143]
gi|331057195|gb|EGI29185.1| DNA polymerase I (POL I) [Escherichia coli TA143]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|331660412|ref|ZP_08361346.1| DNA polymerase I (POL I) [Escherichia coli TA206]
gi|422367992|ref|ZP_16448412.1| DNA-directed DNA polymerase [Escherichia coli MS 16-3]
gi|432901529|ref|ZP_20111548.1| DNA polymerase I [Escherichia coli KTE192]
gi|433030822|ref|ZP_20218664.1| DNA polymerase I [Escherichia coli KTE109]
gi|315300272|gb|EFU59508.1| DNA-directed DNA polymerase [Escherichia coli MS 16-3]
gi|331052361|gb|EGI24398.1| DNA polymerase I (POL I) [Escherichia coli TA206]
gi|431421282|gb|ELH03495.1| DNA polymerase I [Escherichia coli KTE192]
gi|431539828|gb|ELI15466.1| DNA polymerase I [Escherichia coli KTE109]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|293413298|ref|ZP_06655959.1| DNA polymerase I [Escherichia coli B354]
gi|291468046|gb|EFF10544.1| DNA polymerase I [Escherichia coli B354]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|291285274|ref|YP_003502092.1| DNA polymerase I [Escherichia coli O55:H7 str. CB9615]
gi|290765147|gb|ADD59108.1| DNA polymerase I [Escherichia coli O55:H7 str. CB9615]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|387831769|ref|YP_003351706.1| DNA polymerase I [Escherichia coli SE15]
gi|417142077|ref|ZP_11984652.1| DNA-directed DNA polymerase [Escherichia coli 97.0259]
gi|417311422|ref|ZP_12098158.1| DNA polymerase I [Escherichia coli PCN033]
gi|432502435|ref|ZP_19744182.1| DNA polymerase I [Escherichia coli KTE216]
gi|432696743|ref|ZP_19931932.1| DNA polymerase I [Escherichia coli KTE162]
gi|432923158|ref|ZP_20125853.1| DNA polymerase I [Escherichia coli KTE173]
gi|432929913|ref|ZP_20130789.1| DNA polymerase I [Escherichia coli KTE175]
gi|432983401|ref|ZP_20172150.1| DNA polymerase I [Escherichia coli KTE211]
gi|433098708|ref|ZP_20284871.1| DNA polymerase I [Escherichia coli KTE139]
gi|433108140|ref|ZP_20294095.1| DNA polymerase I [Escherichia coli KTE148]
gi|281180926|dbj|BAI57256.1| DNA polymerase I [Escherichia coli SE15]
gi|338766999|gb|EGP21883.1| DNA polymerase I [Escherichia coli PCN033]
gi|386155101|gb|EIH11456.1| DNA-directed DNA polymerase [Escherichia coli 97.0259]
gi|431025507|gb|ELD38609.1| DNA polymerase I [Escherichia coli KTE216]
gi|431230514|gb|ELF26293.1| DNA polymerase I [Escherichia coli KTE162]
gi|431434104|gb|ELH15756.1| DNA polymerase I [Escherichia coli KTE173]
gi|431439286|gb|ELH20621.1| DNA polymerase I [Escherichia coli KTE175]
gi|431486754|gb|ELH66400.1| DNA polymerase I [Escherichia coli KTE211]
gi|431611837|gb|ELI81100.1| DNA polymerase I [Escherichia coli KTE139]
gi|431623190|gb|ELI91864.1| DNA polymerase I [Escherichia coli KTE148]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|260846368|ref|YP_003224146.1| DNA polymerase I [Escherichia coli O103:H2 str. 12009]
gi|257761515|dbj|BAI33012.1| DNA polymerase I [Escherichia coli O103:H2 str. 12009]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|222158571|ref|YP_002558710.1| DNA polymerase I [Escherichia coli LF82]
gi|387619172|ref|YP_006122194.1| DNA polymerase I [Escherichia coli O83:H1 str. NRG 857C]
gi|222035576|emb|CAP78321.1| DNA polymerase I [Escherichia coli LF82]
gi|312948433|gb|ADR29260.1| DNA polymerase I [Escherichia coli O83:H1 str. NRG 857C]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|218550897|ref|YP_002384688.1| DNA polymerase I [Escherichia fergusonii ATCC 35469]
gi|218358438|emb|CAQ91085.1| fused DNA polymerase I 5'->3' exonuclease ; 3'->5' polymerase ;
3'->5' exonuclease [Escherichia fergusonii ATCC 35469]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|15804448|ref|NP_290488.1| DNA polymerase I [Escherichia coli O157:H7 str. EDL933]
gi|15834040|ref|NP_312813.1| DNA polymerase I [Escherichia coli O157:H7 str. Sakai]
gi|168755528|ref|ZP_02780535.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4401]
gi|168768145|ref|ZP_02793152.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4486]
gi|168780763|ref|ZP_02805770.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4076]
gi|208808881|ref|ZP_03251218.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4206]
gi|208812650|ref|ZP_03253979.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4045]
gi|208818813|ref|ZP_03259133.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4042]
gi|209400301|ref|YP_002273378.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4115]
gi|217325868|ref|ZP_03441952.1| DNA polymerase I [Escherichia coli O157:H7 str. TW14588]
gi|254795854|ref|YP_003080691.1| DNA polymerase I [Escherichia coli O157:H7 str. TW14359]
gi|261223490|ref|ZP_05937771.1| DNA polymerase I [Escherichia coli O157:H7 str. FRIK2000]
gi|261257253|ref|ZP_05949786.1| DNA polymerase I [Escherichia coli O157:H7 str. FRIK966]
gi|386616683|ref|YP_006136349.1| DNA polymerase I PolA [Escherichia coli UMNK88]
gi|387509307|ref|YP_006161563.1| DNA polymerase I [Escherichia coli O55:H7 str. RM12579]
gi|387614553|ref|YP_006117669.1| DNA polymerase I [Escherichia coli ETEC H10407]
gi|387885085|ref|YP_006315387.1| DNA polymerase I [Escherichia coli Xuzhou21]
gi|404377251|ref|ZP_10982388.1| DNA polymerase I [Escherichia sp. 1_1_43]
gi|416315402|ref|ZP_11659340.1| DNA polymerase I [Escherichia coli O157:H7 str. 1044]
gi|416319691|ref|ZP_11662243.1| DNA polymerase I [Escherichia coli O157:H7 str. EC1212]
gi|416327969|ref|ZP_11667838.1| DNA polymerase I [Escherichia coli O157:H7 str. 1125]
gi|416790193|ref|ZP_11881030.1| DNA polymerase I [Escherichia coli O157:H- str. 493-89]
gi|416812817|ref|ZP_11890840.1| DNA polymerase I [Escherichia coli O55:H7 str. 3256-97]
gi|416823301|ref|ZP_11895457.1| DNA polymerase I [Escherichia coli O55:H7 str. USDA 5905]
gi|416833614|ref|ZP_11900452.1| DNA polymerase I [Escherichia coli O157:H7 str. LSU-61]
gi|419047993|ref|ZP_13594921.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC3A]
gi|419053738|ref|ZP_13600602.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC3B]
gi|419059774|ref|ZP_13606571.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC3C]
gi|419065163|ref|ZP_13611869.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC3D]
gi|419078095|ref|ZP_13623590.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC3F]
gi|419089167|ref|ZP_13634514.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC4B]
gi|419095008|ref|ZP_13640281.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC4C]
gi|419100900|ref|ZP_13646084.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC4D]
gi|419106496|ref|ZP_13651616.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC4E]
gi|419111890|ref|ZP_13656938.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC4F]
gi|419117425|ref|ZP_13662430.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC5A]
gi|419123152|ref|ZP_13668090.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC5B]
gi|419128646|ref|ZP_13673513.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC5C]
gi|419139223|ref|ZP_13684011.1| DNA polymerase I [Escherichia coli DEC5E]
gi|420277991|ref|ZP_14780268.1| DNA polymerase I [Escherichia coli PA40]
gi|420280179|ref|ZP_14782432.1| DNA polymerase I [Escherichia coli TW06591]
gi|420289423|ref|ZP_14791602.1| DNA polymerase I [Escherichia coli TW10246]
gi|420295048|ref|ZP_14797154.1| DNA polymerase I [Escherichia coli TW11039]
gi|420300999|ref|ZP_14803039.1| DNA polymerase I [Escherichia coli TW09109]
gi|420306942|ref|ZP_14808926.1| DNA polymerase I [Escherichia coli TW10119]
gi|420312224|ref|ZP_14814148.1| DNA polymerase I [Escherichia coli EC1738]
gi|420318013|ref|ZP_14819880.1| DNA polymerase I [Escherichia coli EC1734]
gi|421814930|ref|ZP_16250627.1| DNA polymerase I [Escherichia coli 8.0416]
gi|421820663|ref|ZP_16256144.1| DNA polymerase I [Escherichia coli 10.0821]
gi|421826640|ref|ZP_16261991.1| DNA polymerase I [Escherichia coli FRIK920]
gi|421827511|ref|ZP_16262850.1| DNA polymerase I [Escherichia coli PA7]
gi|422768942|ref|ZP_16822665.1| DNA polymerase I [Escherichia coli E1520]
gi|424080193|ref|ZP_17817130.1| DNA polymerase I [Escherichia coli FDA505]
gi|424086588|ref|ZP_17823056.1| DNA polymerase I [Escherichia coli FDA517]
gi|424112525|ref|ZP_17846734.1| DNA polymerase I [Escherichia coli 93-001]
gi|424118459|ref|ZP_17852276.1| DNA polymerase I [Escherichia coli PA3]
gi|424124658|ref|ZP_17857937.1| DNA polymerase I [Escherichia coli PA5]
gi|424150061|ref|ZP_17881419.1| DNA polymerase I [Escherichia coli PA15]
gi|424163789|ref|ZP_17886839.1| DNA polymerase I [Escherichia coli PA24]
gi|424489790|ref|ZP_17938309.1| DNA polymerase I [Escherichia coli TW09098]
gi|424496486|ref|ZP_17943998.1| DNA polymerase I [Escherichia coli TW09195]
gi|424509383|ref|ZP_17955732.1| DNA polymerase I [Escherichia coli EC4196]
gi|424516787|ref|ZP_17961353.1| DNA polymerase I [Escherichia coli TW14313]
gi|424553362|ref|ZP_17995171.1| DNA polymerase I [Escherichia coli EC4439]
gi|424559563|ref|ZP_18000939.1| DNA polymerase I [Escherichia coli EC4436]
gi|424565884|ref|ZP_18006869.1| DNA polymerase I [Escherichia coli EC4437]
gi|424583993|ref|ZP_18023622.1| DNA polymerase I [Escherichia coli EC1863]
gi|425100667|ref|ZP_18503386.1| DNA polymerase I [Escherichia coli 3.4870]
gi|425106741|ref|ZP_18509039.1| DNA polymerase I [Escherichia coli 5.2239]
gi|425134439|ref|ZP_18535274.1| DNA polymerase I [Escherichia coli 8.2524]
gi|425141033|ref|ZP_18541397.1| DNA polymerase I [Escherichia coli 10.0833]
gi|425152823|ref|ZP_18552420.1| DNA polymerase I [Escherichia coli 88.0221]
gi|425158722|ref|ZP_18557968.1| DNA polymerase I [Escherichia coli PA34]
gi|425195920|ref|ZP_18592674.1| DNA polymerase I [Escherichia coli NE1487]
gi|425208776|ref|ZP_18604557.1| DNA polymerase I [Escherichia coli FRIK2001]
gi|425227306|ref|ZP_18621756.1| DNA polymerase I [Escherichia coli PA49]
gi|425233463|ref|ZP_18627486.1| DNA polymerase I [Escherichia coli PA45]
gi|425239385|ref|ZP_18633089.1| DNA polymerase I [Escherichia coli TT12B]
gi|425245621|ref|ZP_18638911.1| DNA polymerase I [Escherichia coli MA6]
gi|425251815|ref|ZP_18644742.1| DNA polymerase I [Escherichia coli 5905]
gi|425257615|ref|ZP_18650093.1| DNA polymerase I [Escherichia coli CB7326]
gi|425263869|ref|ZP_18655844.1| DNA polymerase I [Escherichia coli EC96038]
gi|425269861|ref|ZP_18661471.1| DNA polymerase I [Escherichia coli 5412]
gi|425297333|ref|ZP_18687440.1| DNA polymerase I [Escherichia coli PA38]
gi|425314032|ref|ZP_18703182.1| DNA polymerase I [Escherichia coli EC1735]
gi|425320014|ref|ZP_18708774.1| DNA polymerase I [Escherichia coli EC1736]
gi|425326154|ref|ZP_18714463.1| DNA polymerase I [Escherichia coli EC1737]
gi|425338641|ref|ZP_18725963.1| DNA polymerase I [Escherichia coli EC1847]
gi|425344935|ref|ZP_18731807.1| DNA polymerase I [Escherichia coli EC1848]
gi|425362996|ref|ZP_18748627.1| DNA polymerase I [Escherichia coli EC1856]
gi|425395181|ref|ZP_18778270.1| DNA polymerase I [Escherichia coli EC1868]
gi|425401236|ref|ZP_18783925.1| DNA polymerase I [Escherichia coli EC1869]
gi|425413689|ref|ZP_18795434.1| DNA polymerase I [Escherichia coli NE098]
gi|425420087|ref|ZP_18801336.1| DNA polymerase I [Escherichia coli FRIK523]
gi|425431301|ref|ZP_18811893.1| DNA polymerase I [Escherichia coli 0.1304]
gi|428949708|ref|ZP_19021963.1| DNA polymerase I [Escherichia coli 88.1467]
gi|428955781|ref|ZP_19027554.1| DNA polymerase I [Escherichia coli 88.1042]
gi|428961911|ref|ZP_19033167.1| DNA polymerase I [Escherichia coli 89.0511]
gi|428968402|ref|ZP_19039089.1| DNA polymerase I [Escherichia coli 90.0091]
gi|428974153|ref|ZP_19044447.1| DNA polymerase I [Escherichia coli 90.0039]
gi|428980634|ref|ZP_19050423.1| DNA polymerase I [Escherichia coli 90.2281]
gi|428986354|ref|ZP_19055726.1| DNA polymerase I [Escherichia coli 93.0055]
gi|428992496|ref|ZP_19061467.1| DNA polymerase I [Escherichia coli 93.0056]
gi|428998393|ref|ZP_19066967.1| DNA polymerase I [Escherichia coli 94.0618]
gi|429010820|ref|ZP_19078199.1| DNA polymerase I [Escherichia coli 95.1288]
gi|429023160|ref|ZP_19089658.1| DNA polymerase I [Escherichia coli 96.0428]
gi|429035348|ref|ZP_19100854.1| DNA polymerase I [Escherichia coli 96.0939]
gi|429047360|ref|ZP_19112055.1| DNA polymerase I [Escherichia coli 96.0107]
gi|429052635|ref|ZP_19117190.1| DNA polymerase I [Escherichia coli 97.0003]
gi|429063710|ref|ZP_19127665.1| DNA polymerase I [Escherichia coli 97.0007]
gi|429075690|ref|ZP_19138931.1| DNA polymerase I [Escherichia coli 99.0678]
gi|429080938|ref|ZP_19144061.1| DNA polymerase I [Escherichia coli 99.0713]
gi|429829119|ref|ZP_19360096.1| DNA polymerase I [Escherichia coli 96.0109]
gi|432419382|ref|ZP_19661970.1| DNA polymerase I [Escherichia coli KTE44]
gi|432578131|ref|ZP_19814575.1| DNA polymerase I [Escherichia coli KTE56]
gi|444927604|ref|ZP_21246856.1| DNA polymerase I [Escherichia coli 09BKT078844]
gi|444933213|ref|ZP_21252208.1| DNA polymerase I [Escherichia coli 99.0814]
gi|444944331|ref|ZP_21262803.1| DNA polymerase I [Escherichia coli 99.0816]
gi|444955420|ref|ZP_21273473.1| DNA polymerase I [Escherichia coli 99.0848]
gi|444960786|ref|ZP_21278596.1| DNA polymerase I [Escherichia coli 99.1753]
gi|444966013|ref|ZP_21283563.1| DNA polymerase I [Escherichia coli 99.1775]
gi|444972048|ref|ZP_21289375.1| DNA polymerase I [Escherichia coli 99.1793]
gi|444977336|ref|ZP_21294400.1| DNA polymerase I [Escherichia coli 99.1805]
gi|444988088|ref|ZP_21304853.1| DNA polymerase I [Escherichia coli PA11]
gi|444993466|ref|ZP_21310095.1| DNA polymerase I [Escherichia coli PA19]
gi|445004189|ref|ZP_21320567.1| DNA polymerase I [Escherichia coli PA2]
gi|445009609|ref|ZP_21325826.1| DNA polymerase I [Escherichia coli PA47]
gi|445014687|ref|ZP_21330780.1| DNA polymerase I [Escherichia coli PA48]
gi|445026018|ref|ZP_21341829.1| DNA polymerase I [Escherichia coli 7.1982]
gi|445031425|ref|ZP_21347079.1| DNA polymerase I [Escherichia coli 99.1781]
gi|445042527|ref|ZP_21357887.1| DNA polymerase I [Escherichia coli PA35]
gi|445056353|ref|ZP_21371253.1| DNA polymerase I [Escherichia coli 99.0670]
gi|452969520|ref|ZP_21967747.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4009]
gi|12518742|gb|AAG59052.1|AE005617_1 DNA polymerase I [Escherichia coli O157:H7 str. EDL933]
gi|13364262|dbj|BAB38209.1| DNA polymerase I [Escherichia coli O157:H7 str. Sakai]
gi|189001592|gb|EDU70578.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4076]
gi|189357227|gb|EDU75646.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4401]
gi|189362585|gb|EDU81004.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4486]
gi|208728682|gb|EDZ78283.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4206]
gi|208733927|gb|EDZ82614.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4045]
gi|208738936|gb|EDZ86618.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4042]
gi|209161701|gb|ACI39134.1| DNA polymerase I [Escherichia coli O157:H7 str. EC4115]
gi|209752838|gb|ACI74726.1| essential GTPase for cell cycle [Escherichia coli]
gi|209752840|gb|ACI74727.1| essential GTPase for cell cycle [Escherichia coli]
gi|209752842|gb|ACI74728.1| essential GTPase for cell cycle [Escherichia coli]
gi|209752844|gb|ACI74729.1| essential GTPase for cell cycle [Escherichia coli]
gi|209752846|gb|ACI74730.1| essential GTPase for cell cycle [Escherichia coli]
gi|217322089|gb|EEC30513.1| DNA polymerase I [Escherichia coli O157:H7 str. TW14588]
gi|226838510|gb|EEH70539.1| DNA polymerase I [Escherichia sp. 1_1_43]
gi|254595254|gb|ACT74615.1| DNA polymerase I [Escherichia coli O157:H7 str. TW14359]
gi|309704289|emb|CBJ03638.1| DNA polymerase I [Escherichia coli ETEC H10407]
gi|320191047|gb|EFW65697.1| DNA polymerase I [Escherichia coli O157:H7 str. EC1212]
gi|320644589|gb|EFX13643.1| DNA polymerase I [Escherichia coli O157:H- str. 493-89]
gi|320655220|gb|EFX23166.1| DNA polymerase I [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320660846|gb|EFX28292.1| DNA polymerase I [Escherichia coli O55:H7 str. USDA 5905]
gi|320666006|gb|EFX33025.1| DNA polymerase I [Escherichia coli O157:H7 str. LSU-61]
gi|323934350|gb|EGB30763.1| DNA polymerase I [Escherichia coli E1520]
gi|326338135|gb|EGD61965.1| DNA polymerase I [Escherichia coli O157:H7 str. 1044]
gi|326342571|gb|EGD66344.1| DNA polymerase I [Escherichia coli O157:H7 str. 1125]
gi|332345852|gb|AEE59186.1| DNA polymerase I PolA [Escherichia coli UMNK88]
gi|374361301|gb|AEZ43008.1| DNA polymerase I [Escherichia coli O55:H7 str. RM12579]
gi|377888897|gb|EHU53367.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC3A]
gi|377888945|gb|EHU53413.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC3B]
gi|377901734|gb|EHU66048.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC3C]
gi|377905298|gb|EHU69569.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC3D]
gi|377916848|gb|EHU80922.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC3F]
gi|377926429|gb|EHU90363.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC4B]
gi|377937173|gb|EHV00960.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC4D]
gi|377937552|gb|EHV01328.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC4C]
gi|377943526|gb|EHV07236.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC4E]
gi|377953582|gb|EHV17151.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC4F]
gi|377956905|gb|EHV20444.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC5A]
gi|377961429|gb|EHV24897.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC5B]
gi|377969137|gb|EHV32517.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC5C]
gi|377980081|gb|EHV43349.1| DNA polymerase I [Escherichia coli DEC5E]
gi|386798543|gb|AFJ31577.1| DNA polymerase I [Escherichia coli Xuzhou21]
gi|390637395|gb|EIN16944.1| DNA polymerase I [Escherichia coli FDA505]
gi|390638117|gb|EIN17634.1| DNA polymerase I [Escherichia coli FDA517]
gi|390656500|gb|EIN34366.1| DNA polymerase I [Escherichia coli 93-001]
gi|390673839|gb|EIN50054.1| DNA polymerase I [Escherichia coli PA3]
gi|390677169|gb|EIN53232.1| DNA polymerase I [Escherichia coli PA5]
gi|390697244|gb|EIN71668.1| DNA polymerase I [Escherichia coli PA15]
gi|390717323|gb|EIN90110.1| DNA polymerase I [Escherichia coli PA24]
gi|390755585|gb|EIO25121.1| DNA polymerase I [Escherichia coli PA40]
gi|390783322|gb|EIO50929.1| DNA polymerase I [Escherichia coli TW06591]
gi|390786697|gb|EIO54203.1| DNA polymerase I [Escherichia coli TW10246]
gi|390792927|gb|EIO60274.1| DNA polymerase I [Escherichia coli TW11039]
gi|390799843|gb|EIO66966.1| DNA polymerase I [Escherichia coli TW09098]
gi|390804256|gb|EIO71232.1| DNA polymerase I [Escherichia coli TW09109]
gi|390813439|gb|EIO80055.1| DNA polymerase I [Escherichia coli TW10119]
gi|390821898|gb|EIO88059.1| DNA polymerase I [Escherichia coli TW09195]
gi|390827420|gb|EIO93187.1| DNA polymerase I [Escherichia coli EC4196]
gi|390840599|gb|EIP04618.1| DNA polymerase I [Escherichia coli TW14313]
gi|390874701|gb|EIP35793.1| DNA polymerase I [Escherichia coli EC4439]
gi|390880139|gb|EIP40846.1| DNA polymerase I [Escherichia coli EC4436]
gi|390890043|gb|EIP49733.1| DNA polymerase I [Escherichia coli EC4437]
gi|390897733|gb|EIP57040.1| DNA polymerase I [Escherichia coli EC1738]
gi|390905743|gb|EIP64673.1| DNA polymerase I [Escherichia coli EC1734]
gi|390915696|gb|EIP74199.1| DNA polymerase I [Escherichia coli EC1863]
gi|408063511|gb|EKG98002.1| DNA polymerase I [Escherichia coli FRIK920]
gi|408064936|gb|EKG99416.1| DNA polymerase I [Escherichia coli PA34]
gi|408074406|gb|EKH08688.1| DNA polymerase I [Escherichia coli PA7]
gi|408105565|gb|EKH37716.1| DNA polymerase I [Escherichia coli NE1487]
gi|408118639|gb|EKH49763.1| DNA polymerase I [Escherichia coli FRIK2001]
gi|408136746|gb|EKH66481.1| DNA polymerase I [Escherichia coli PA49]
gi|408143598|gb|EKH72877.1| DNA polymerase I [Escherichia coli PA45]
gi|408151979|gb|EKH80433.1| DNA polymerase I [Escherichia coli TT12B]
gi|408157040|gb|EKH85213.1| DNA polymerase I [Escherichia coli MA6]
gi|408161157|gb|EKH89131.1| DNA polymerase I [Escherichia coli 5905]
gi|408170212|gb|EKH97430.1| DNA polymerase I [Escherichia coli CB7326]
gi|408177145|gb|EKI03964.1| DNA polymerase I [Escherichia coli EC96038]
gi|408180093|gb|EKI06724.1| DNA polymerase I [Escherichia coli 5412]
gi|408210477|gb|EKI35040.1| DNA polymerase I [Escherichia coli PA38]
gi|408223409|gb|EKI47182.1| DNA polymerase I [Escherichia coli EC1735]
gi|408234774|gb|EKI57772.1| DNA polymerase I [Escherichia coli EC1736]
gi|408237404|gb|EKI60260.1| DNA polymerase I [Escherichia coli EC1737]
gi|408251695|gb|EKI73415.1| DNA polymerase I [Escherichia coli EC1847]
gi|408255982|gb|EKI77390.1| DNA polymerase I [Escherichia coli EC1848]
gi|408274066|gb|EKI94094.1| DNA polymerase I [Escherichia coli EC1856]
gi|408303028|gb|EKJ20496.1| DNA polymerase I [Escherichia coli EC1868]
gi|408315686|gb|EKJ31990.1| DNA polymerase I [Escherichia coli EC1869]
gi|408322980|gb|EKJ38953.1| DNA polymerase I [Escherichia coli NE098]
gi|408333650|gb|EKJ48596.1| DNA polymerase I [Escherichia coli FRIK523]
gi|408341646|gb|EKJ56089.1| DNA polymerase I [Escherichia coli 0.1304]
gi|408544707|gb|EKK22156.1| DNA polymerase I [Escherichia coli 5.2239]
gi|408545062|gb|EKK22502.1| DNA polymerase I [Escherichia coli 3.4870]
gi|408575538|gb|EKK51196.1| DNA polymerase I [Escherichia coli 10.0833]
gi|408578277|gb|EKK53796.1| DNA polymerase I [Escherichia coli 8.2524]
gi|408593137|gb|EKK67465.1| DNA polymerase I [Escherichia coli 88.0221]
gi|408598787|gb|EKK72728.1| DNA polymerase I [Escherichia coli 8.0416]
gi|408608531|gb|EKK81921.1| DNA polymerase I [Escherichia coli 10.0821]
gi|427200910|gb|EKV71317.1| DNA polymerase I [Escherichia coli 89.0511]
gi|427201162|gb|EKV71558.1| DNA polymerase I [Escherichia coli 88.1042]
gi|427204449|gb|EKV74725.1| DNA polymerase I [Escherichia coli 88.1467]
gi|427217426|gb|EKV86488.1| DNA polymerase I [Escherichia coli 90.0091]
gi|427221188|gb|EKV90056.1| DNA polymerase I [Escherichia coli 90.2281]
gi|427224017|gb|EKV92739.1| DNA polymerase I [Escherichia coli 90.0039]
gi|427237702|gb|EKW05227.1| DNA polymerase I [Escherichia coli 93.0056]
gi|427237781|gb|EKW05304.1| DNA polymerase I [Escherichia coli 93.0055]
gi|427242367|gb|EKW09778.1| DNA polymerase I [Escherichia coli 94.0618]
gi|427257717|gb|EKW23834.1| DNA polymerase I [Escherichia coli 95.1288]
gi|427272955|gb|EKW37661.1| DNA polymerase I [Escherichia coli 96.0428]
gi|427280219|gb|EKW44584.1| DNA polymerase I [Escherichia coli 96.0939]
gi|427295744|gb|EKW58830.1| DNA polymerase I [Escherichia coli 96.0107]
gi|427297467|gb|EKW60501.1| DNA polymerase I [Escherichia coli 97.0003]
gi|427310639|gb|EKW72878.1| DNA polymerase I [Escherichia coli 97.0007]
gi|427324778|gb|EKW86238.1| DNA polymerase I [Escherichia coli 99.0678]
gi|427325913|gb|EKW87340.1| DNA polymerase I [Escherichia coli 99.0713]
gi|429250586|gb|EKY35238.1| DNA polymerase I [Escherichia coli 96.0109]
gi|430935615|gb|ELC55915.1| DNA polymerase I [Escherichia coli KTE44]
gi|431111217|gb|ELE15122.1| DNA polymerase I [Escherichia coli KTE56]
gi|444534786|gb|ELV14970.1| DNA polymerase I [Escherichia coli 99.0814]
gi|444536239|gb|ELV16269.1| DNA polymerase I [Escherichia coli 09BKT078844]
gi|444554136|gb|ELV31716.1| DNA polymerase I [Escherichia coli 99.0816]
gi|444559048|gb|ELV36296.1| DNA polymerase I [Escherichia coli 99.0848]
gi|444568750|gb|ELV45403.1| DNA polymerase I [Escherichia coli 99.1753]
gi|444572207|gb|ELV48652.1| DNA polymerase I [Escherichia coli 99.1775]
gi|444575638|gb|ELV51868.1| DNA polymerase I [Escherichia coli 99.1793]
gi|444587764|gb|ELV63173.1| DNA polymerase I [Escherichia coli 99.1805]
gi|444589141|gb|ELV64484.1| DNA polymerase I [Escherichia coli PA11]
gi|444603034|gb|ELV77750.1| DNA polymerase I [Escherichia coli PA19]
gi|444612198|gb|ELV86498.1| DNA polymerase I [Escherichia coli PA2]
gi|444618731|gb|ELV92802.1| DNA polymerase I [Escherichia coli PA47]
gi|444620084|gb|ELV94100.1| DNA polymerase I [Escherichia coli PA48]
gi|444634956|gb|ELW08398.1| DNA polymerase I [Escherichia coli 7.1982]
gi|444636943|gb|ELW10326.1| DNA polymerase I [Escherichia coli 99.1781]
gi|444651580|gb|ELW24381.1| DNA polymerase I [Escherichia coli PA35]
gi|444671741|gb|ELW43525.1| DNA polymerase I [Escherichia coli 99.0670]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|157163334|ref|YP_001460652.1| DNA polymerase I [Escherichia coli HS]
gi|157069014|gb|ABV08269.1| DNA polymerase I [Escherichia coli HS]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|194433216|ref|ZP_03065497.1| DNA polymerase I [Shigella dysenteriae 1012]
gi|194418500|gb|EDX34588.1| DNA polymerase I [Shigella dysenteriae 1012]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|16131704|ref|NP_418300.1| fused DNA polymerase I 5'->3' polymerase/3'->5' exonuclease/5'->3'
exonuclease [Escherichia coli str. K-12 substr. MG1655]
gi|74314369|ref|YP_312788.1| DNA polymerase I [Shigella sonnei Ss046]
gi|157158243|ref|YP_001465344.1| DNA polymerase I [Escherichia coli E24377A]
gi|170022122|ref|YP_001727076.1| DNA polymerase I [Escherichia coli ATCC 8739]
gi|170083336|ref|YP_001732656.1| DNA polymerase I [Escherichia coli str. K-12 substr. DH10B]
gi|187733745|ref|YP_001882560.1| DNA polymerase I [Shigella boydii CDC 3083-94]
gi|188493758|ref|ZP_03001028.1| DNA polymerase I [Escherichia coli 53638]
gi|191169441|ref|ZP_03031178.1| DNA polymerase I [Escherichia coli B7A]
gi|193063893|ref|ZP_03044979.1| DNA polymerase I [Escherichia coli E22]
gi|193068096|ref|ZP_03049061.1| DNA polymerase I [Escherichia coli E110019]
gi|194430447|ref|ZP_03062929.1| DNA polymerase I [Escherichia coli B171]
gi|194440160|ref|ZP_03072207.1| DNA polymerase I [Escherichia coli 101-1]
gi|209921336|ref|YP_002295420.1| DNA polymerase I [Escherichia coli SE11]
gi|218556422|ref|YP_002389336.1| DNA polymerase I [Escherichia coli IAI1]
gi|218697577|ref|YP_002405244.1| DNA polymerase I [Escherichia coli 55989]
gi|238902931|ref|YP_002928727.1| DNA polymerase I [Escherichia coli BW2952]
gi|251787128|ref|YP_003001432.1| DNA polymerase I, 5'--> 3' polymerase, 5'--> 3' and 3'--> 5'
exonuclease [Escherichia coli BL21(DE3)]
gi|253775502|ref|YP_003038333.1| DNA polymerase I [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254163815|ref|YP_003046923.1| DNA polymerase I [Escherichia coli B str. REL606]
gi|254290565|ref|YP_003056313.1| DNA polymerase I [Escherichia coli BL21(DE3)]
gi|293470175|ref|ZP_06664586.1| DNA polymerase I [Escherichia coli B088]
gi|300819242|ref|ZP_07099442.1| DNA-directed DNA polymerase [Escherichia coli MS 107-1]
gi|300823683|ref|ZP_07103809.1| DNA-directed DNA polymerase [Escherichia coli MS 119-7]
gi|300919043|ref|ZP_07135589.1| DNA-directed DNA polymerase [Escherichia coli MS 115-1]
gi|300948178|ref|ZP_07162305.1| DNA-directed DNA polymerase [Escherichia coli MS 116-1]
gi|300958283|ref|ZP_07170427.1| DNA-directed DNA polymerase [Escherichia coli MS 175-1]
gi|301027901|ref|ZP_07191194.1| DNA-directed DNA polymerase [Escherichia coli MS 196-1]
gi|301648434|ref|ZP_07248167.1| DNA-directed DNA polymerase [Escherichia coli MS 146-1]
gi|309797831|ref|ZP_07692214.1| DNA-directed DNA polymerase [Escherichia coli MS 145-7]
gi|331644592|ref|ZP_08345711.1| DNA polymerase I (POL I) [Escherichia coli H736]
gi|331655544|ref|ZP_08356536.1| DNA polymerase I (POL I) [Escherichia coli M718]
gi|331670705|ref|ZP_08371541.1| DNA polymerase I (POL I) [Escherichia coli TA271]
gi|331675321|ref|ZP_08376071.1| DNA polymerase I (POL I) [Escherichia coli TA280]
gi|331679970|ref|ZP_08380632.1| DNA polymerase I (POL I) [Escherichia coli H591]
gi|332282738|ref|ZP_08395151.1| fused DNA polymerase I 5'->3' exonuclease/3'->5' polymerase/3'->5'
exonuclease [Shigella sp. D9]
gi|383181120|ref|YP_005459125.1| DNA polymerase I [Shigella sonnei 53G]
gi|386282476|ref|ZP_10060127.1| DNA polymerase I [Escherichia sp. 4_1_40B]
gi|386597612|ref|YP_006094012.1| DNA polymerase I [Escherichia coli DH1]
gi|387623508|ref|YP_006131136.1| DNA polymerase I [Escherichia coli DH1]
gi|388479394|ref|YP_491586.1| fused DNA polymerase I 5'->3' exonuclease, 3'->5' polymerase and
3'->5' exonuclease [Escherichia coli str. K-12 substr.
W3110]
gi|415799665|ref|ZP_11498922.1| DNA polymerase I [Escherichia coli E128010]
gi|415810400|ref|ZP_11502807.1| DNA polymerase I [Escherichia coli LT-68]
gi|415838362|ref|ZP_11520340.1| DNA polymerase I [Escherichia coli RN587/1]
gi|415876603|ref|ZP_11542985.1| DNA polymerase I [Escherichia coli MS 79-10]
gi|416269221|ref|ZP_11642393.1| DNA polymerase I [Shigella dysenteriae CDC 74-1112]
gi|417121886|ref|ZP_11971259.1| DNA-directed DNA polymerase [Escherichia coli 97.0246]
gi|417132273|ref|ZP_11977058.1| DNA-directed DNA polymerase [Escherichia coli 5.0588]
gi|417148809|ref|ZP_11988900.1| DNA-directed DNA polymerase [Escherichia coli 1.2264]
gi|417157845|ref|ZP_11995469.1| DNA-directed DNA polymerase [Escherichia coli 96.0497]
gi|417161211|ref|ZP_11997544.1| DNA-directed DNA polymerase [Escherichia coli 99.0741]
gi|417175027|ref|ZP_12004823.1| DNA-directed DNA polymerase [Escherichia coli 3.2608]
gi|417185465|ref|ZP_12010866.1| DNA-directed DNA polymerase [Escherichia coli 93.0624]
gi|417222352|ref|ZP_12025792.1| DNA-directed DNA polymerase [Escherichia coli 96.154]
gi|417241761|ref|ZP_12037518.1| DNA-directed DNA polymerase [Escherichia coli 9.0111]
gi|417249349|ref|ZP_12041133.1| DNA-directed DNA polymerase [Escherichia coli 4.0967]
gi|417273368|ref|ZP_12060715.1| DNA-directed DNA polymerase [Escherichia coli 2.4168]
gi|417279156|ref|ZP_12066466.1| DNA-directed DNA polymerase [Escherichia coli 3.2303]
gi|417281688|ref|ZP_12068988.1| DNA-directed DNA polymerase [Escherichia coli 3003]
gi|417293514|ref|ZP_12080793.1| DNA-directed DNA polymerase [Escherichia coli B41]
gi|417599297|ref|ZP_12249921.1| DNA polymerase I [Escherichia coli 3030-1]
gi|417604764|ref|ZP_12255325.1| DNA polymerase I [Escherichia coli STEC_94C]
gi|417615522|ref|ZP_12265969.1| DNA polymerase I [Escherichia coli STEC_EH250]
gi|417626036|ref|ZP_12276323.1| DNA polymerase I [Escherichia coli STEC_H.1.8]
gi|417636816|ref|ZP_12287020.1| DNA polymerase I [Escherichia coli STEC_S1191]
gi|417669451|ref|ZP_12318986.1| DNA polymerase I [Escherichia coli STEC_O31]
gi|417944988|ref|ZP_12588226.1| DNA polymerase I [Escherichia coli XH140A]
gi|417976886|ref|ZP_12617676.1| DNA polymerase I [Escherichia coli XH001]
gi|418305488|ref|ZP_12917282.1| DNA polymerase I [Escherichia coli UMNF18]
gi|418943606|ref|ZP_13496778.1| DNA polymerase I [Escherichia coli O157:H43 str. T22]
gi|418960257|ref|ZP_13512150.1| DNA-directed DNA polymerase [Escherichia coli J53]
gi|419144967|ref|ZP_13689692.1| DNA polymerase I [Escherichia coli DEC6A]
gi|419150986|ref|ZP_13695630.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC6B]
gi|419156374|ref|ZP_13700926.1| DNA polymerase I [Escherichia coli DEC6C]
gi|419177643|ref|ZP_13721448.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC7B]
gi|419292076|ref|ZP_13834157.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC11A]
gi|419297355|ref|ZP_13839388.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC11B]
gi|419302947|ref|ZP_13844936.1| DNA polymerase I [Escherichia coli DEC11C]
gi|419308892|ref|ZP_13850779.1| DNA polymerase I [Escherichia coli DEC11D]
gi|419313857|ref|ZP_13855711.1| DNA polymerase I [Escherichia coli DEC11E]
gi|419319356|ref|ZP_13861149.1| DNA polymerase I [Escherichia coli DEC12A]
gi|419325305|ref|ZP_13866990.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC12B]
gi|419331576|ref|ZP_13873166.1| DNA polymerase I [Escherichia coli DEC12C]
gi|419336747|ref|ZP_13878260.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC12D]
gi|419342444|ref|ZP_13883895.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC12E]
gi|419393813|ref|ZP_13934612.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC15A]
gi|419399255|ref|ZP_13940013.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC15B]
gi|419404501|ref|ZP_13945216.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC15C]
gi|419409666|ref|ZP_13950346.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC15D]
gi|419415224|ref|ZP_13955853.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC15E]
gi|419804621|ref|ZP_14329775.1| DNA-directed DNA polymerase [Escherichia coli AI27]
gi|419812011|ref|ZP_14336882.1| DNA polymerase I [Escherichia coli O32:H37 str. P4]
gi|419866526|ref|ZP_14388885.1| DNA polymerase I [Escherichia coli O103:H25 str. CVM9340]
gi|419871483|ref|ZP_14393539.1| DNA polymerase I [Escherichia coli O103:H2 str. CVM9450]
gi|419927717|ref|ZP_14445450.1| DNA polymerase I [Escherichia coli 541-1]
gi|419938064|ref|ZP_14454907.1| DNA polymerase I [Escherichia coli 75]
gi|420361304|ref|ZP_14862244.1| DNA polymerase I [Shigella sonnei 3226-85]
gi|420393995|ref|ZP_14893238.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli EPEC C342-62]
gi|421684781|ref|ZP_16124563.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Shigella flexneri 1485-80]
gi|421777457|ref|ZP_16214053.1| DNA-directed DNA polymerase [Escherichia coli AD30]
gi|422352191|ref|ZP_16432985.1| DNA-directed DNA polymerase [Escherichia coli MS 117-3]
gi|422773743|ref|ZP_16827425.1| DNA polymerase I [Escherichia coli E482]
gi|422789071|ref|ZP_16841804.1| DNA polymerase I [Escherichia coli H489]
gi|422793704|ref|ZP_16846398.1| DNA polymerase I [Escherichia coli TA007]
gi|422819009|ref|ZP_16867221.1| DNA polymerase I [Escherichia coli M919]
gi|422832065|ref|ZP_16880190.1| DNA polymerase I [Escherichia coli B093]
gi|423703380|ref|ZP_17677812.1| DNA polymerase I [Escherichia coli H730]
gi|423708167|ref|ZP_17682547.1| DNA polymerase I [Escherichia coli B799]
gi|425122204|ref|ZP_18523872.1| DNA polymerase I [Escherichia coli 8.0569]
gi|425291075|ref|ZP_18681881.1| DNA polymerase I [Escherichia coli 3006]
gi|432379093|ref|ZP_19622073.1| DNA polymerase I [Escherichia coli KTE12]
gi|432394529|ref|ZP_19637344.1| DNA polymerase I [Escherichia coli KTE21]
gi|432483272|ref|ZP_19725218.1| DNA polymerase I [Escherichia coli KTE210]
gi|432528715|ref|ZP_19765785.1| DNA polymerase I [Escherichia coli KTE233]
gi|432531649|ref|ZP_19768670.1| DNA polymerase I [Escherichia coli KTE234]
gi|432545697|ref|ZP_19782518.1| DNA polymerase I [Escherichia coli KTE236]
gi|432551175|ref|ZP_19787922.1| DNA polymerase I [Escherichia coli KTE237]
gi|432624231|ref|ZP_19860242.1| DNA polymerase I [Escherichia coli KTE76]
gi|432629480|ref|ZP_19865443.1| DNA polymerase I [Escherichia coli KTE77]
gi|432634762|ref|ZP_19870658.1| DNA polymerase I [Escherichia coli KTE81]
gi|432663105|ref|ZP_19898732.1| DNA polymerase I [Escherichia coli KTE111]
gi|432672950|ref|ZP_19908466.1| DNA polymerase I [Escherichia coli KTE119]
gi|432677037|ref|ZP_19912476.1| DNA polymerase I [Escherichia coli KTE142]
gi|432689186|ref|ZP_19924450.1| DNA polymerase I [Escherichia coli KTE161]
gi|432706590|ref|ZP_19941682.1| DNA polymerase I [Escherichia coli KTE171]
gi|432734904|ref|ZP_19969717.1| DNA polymerase I [Escherichia coli KTE42]
gi|432752313|ref|ZP_19986889.1| DNA polymerase I [Escherichia coli KTE29]
gi|432762720|ref|ZP_19997180.1| DNA polymerase I [Escherichia coli KTE48]
gi|432808104|ref|ZP_20042015.1| DNA polymerase I [Escherichia coli KTE91]
gi|432829476|ref|ZP_20063089.1| DNA polymerase I [Escherichia coli KTE135]
gi|432836870|ref|ZP_20070379.1| DNA polymerase I [Escherichia coli KTE136]
gi|432931655|ref|ZP_20131634.1| DNA polymerase I [Escherichia coli KTE184]
gi|432943551|ref|ZP_20140386.1| DNA polymerase I [Escherichia coli KTE196]
gi|432951137|ref|ZP_20144857.1| DNA polymerase I [Escherichia coli KTE197]
gi|433045393|ref|ZP_20232864.1| DNA polymerase I [Escherichia coli KTE117]
gi|433094254|ref|ZP_20280500.1| DNA polymerase I [Escherichia coli KTE138]
gi|433195916|ref|ZP_20379880.1| DNA polymerase I [Escherichia coli KTE90]
gi|442595830|ref|ZP_21013666.1| DNA polymerase I [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|442598570|ref|ZP_21016330.1| DNA polymerase I [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|450253059|ref|ZP_21902332.1| DNA polymerase I [Escherichia coli S17]
gi|118825|sp|P00582.1|DPO1_ECOLI RecName: Full=DNA polymerase I; Short=POL I
gi|42461|emb|CAA23607.1| unnamed protein product [Escherichia coli]
gi|147312|gb|AAA24402.1| DNA polymerase I [Escherichia coli]
gi|304969|gb|AAB02998.1| DNA polymerase I [Escherichia coli str. K-12 substr. MG1655]
gi|1790294|gb|AAC76861.1| fused DNA polymerase I 5'->3' polymerase/3'->5' exonuclease/5'->3'
exonuclease [Escherichia coli str. K-12 substr. MG1655]
gi|73857846|gb|AAZ90553.1| DNA polymerase I [Shigella sonnei Ss046]
gi|85676195|dbj|BAE77445.1| fused DNA polymerase I 5'->3' exonuclease, 3'->5' polymerase and
3'->5' exonuclease [Escherichia coli str. K12 substr.
W3110]
gi|157080273|gb|ABV19981.1| DNA polymerase I [Escherichia coli E24377A]
gi|169757050|gb|ACA79749.1| DNA polymerase I [Escherichia coli ATCC 8739]
gi|169891171|gb|ACB04878.1| DNA polymerase I [Escherichia coli str. K-12 substr. DH10B]
gi|187430737|gb|ACD10011.1| DNA polymerase I [Shigella boydii CDC 3083-94]
gi|188488957|gb|EDU64060.1| DNA polymerase I [Escherichia coli 53638]
gi|190900509|gb|EDV60321.1| DNA polymerase I [Escherichia coli B7A]
gi|192929358|gb|EDV82966.1| DNA polymerase I [Escherichia coli E22]
gi|192958716|gb|EDV89154.1| DNA polymerase I [Escherichia coli E110019]
gi|194411506|gb|EDX27846.1| DNA polymerase I [Escherichia coli B171]
gi|194420903|gb|EDX36943.1| DNA polymerase I [Escherichia coli 101-1]
gi|209914595|dbj|BAG79669.1| DNA polymerase I [Escherichia coli SE11]
gi|218354309|emb|CAV01020.1| fused DNA polymerase I 5'->3' exonuclease ; 3'->5' polymerase ;
3'->5' exonuclease [Escherichia coli 55989]
gi|218363191|emb|CAR00833.1| fused DNA polymerase I 5'->3' exonuclease ; 3'->5' polymerase ;
3'->5' exonuclease [Escherichia coli IAI1]
gi|238860827|gb|ACR62825.1| DNA polymerase I [Escherichia coli BW2952]
gi|242379401|emb|CAQ34215.1| DNA polymerase I, 5'--> 3' polymerase, 5'--> 3' and 3'--> 5'
exonuclease [Escherichia coli BL21(DE3)]
gi|253326546|gb|ACT31148.1| DNA polymerase I [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975716|gb|ACT41387.1| DNA polymerase I [Escherichia coli B str. REL606]
gi|253979872|gb|ACT45542.1| DNA polymerase I [Escherichia coli BL21(DE3)]
gi|260451301|gb|ACX41723.1| DNA polymerase I [Escherichia coli DH1]
gi|291321385|gb|EFE60824.1| DNA polymerase I [Escherichia coli B088]
gi|299879003|gb|EFI87214.1| DNA-directed DNA polymerase [Escherichia coli MS 196-1]
gi|300315036|gb|EFJ64820.1| DNA-directed DNA polymerase [Escherichia coli MS 175-1]
gi|300413850|gb|EFJ97160.1| DNA-directed DNA polymerase [Escherichia coli MS 115-1]
gi|300452272|gb|EFK15892.1| DNA-directed DNA polymerase [Escherichia coli MS 116-1]
gi|300523745|gb|EFK44814.1| DNA-directed DNA polymerase [Escherichia coli MS 119-7]
gi|300528128|gb|EFK49190.1| DNA-directed DNA polymerase [Escherichia coli MS 107-1]
gi|301073504|gb|EFK88310.1| DNA-directed DNA polymerase [Escherichia coli MS 146-1]
gi|308118587|gb|EFO55849.1| DNA-directed DNA polymerase [Escherichia coli MS 145-7]
gi|315138432|dbj|BAJ45591.1| DNA polymerase I [Escherichia coli DH1]
gi|320174864|gb|EFW49985.1| DNA polymerase I [Shigella dysenteriae CDC 74-1112]
gi|323161077|gb|EFZ46995.1| DNA polymerase I [Escherichia coli E128010]
gi|323174273|gb|EFZ59900.1| DNA polymerase I [Escherichia coli LT-68]
gi|323189713|gb|EFZ74992.1| DNA polymerase I [Escherichia coli RN587/1]
gi|323939084|gb|EGB35300.1| DNA polymerase I [Escherichia coli E482]
gi|323959369|gb|EGB55030.1| DNA polymerase I [Escherichia coli H489]
gi|323969730|gb|EGB65013.1| DNA polymerase I [Escherichia coli TA007]
gi|324019768|gb|EGB88987.1| DNA-directed DNA polymerase [Escherichia coli MS 117-3]
gi|331036054|gb|EGI08290.1| DNA polymerase I (POL I) [Escherichia coli H736]
gi|331046645|gb|EGI18730.1| DNA polymerase I (POL I) [Escherichia coli M718]
gi|331061960|gb|EGI33883.1| DNA polymerase I (POL I) [Escherichia coli TA271]
gi|331067381|gb|EGI38786.1| DNA polymerase I (POL I) [Escherichia coli TA280]
gi|331072296|gb|EGI43629.1| DNA polymerase I (POL I) [Escherichia coli H591]
gi|332105090|gb|EGJ08436.1| fused DNA polymerase I 5'->3' exonuclease/3'->5' polymerase/3'->5'
exonuclease [Shigella sp. D9]
gi|339417586|gb|AEJ59258.1| DNA polymerase I [Escherichia coli UMNF18]
gi|342363371|gb|EGU27480.1| DNA polymerase I [Escherichia coli XH140A]
gi|342928542|gb|EGU97264.1| DNA polymerase I [Escherichia coli MS 79-10]
gi|344193570|gb|EGV47650.1| DNA polymerase I [Escherichia coli XH001]
gi|345346869|gb|EGW79186.1| DNA polymerase I [Escherichia coli STEC_94C]
gi|345348793|gb|EGW81086.1| DNA polymerase I [Escherichia coli 3030-1]
gi|345357418|gb|EGW89613.1| DNA polymerase I [Escherichia coli STEC_EH250]
gi|345371340|gb|EGX03310.1| DNA polymerase I [Escherichia coli STEC_H.1.8]
gi|345384637|gb|EGX14498.1| DNA polymerase I [Escherichia coli STEC_S1191]
gi|359333988|dbj|BAL40435.1| fused DNA polymerase I 5'->3' exonuclease/3'->5' polymerase/3'->5'
exonuclease [Escherichia coli str. K-12 substr. MDS42]
gi|371615784|gb|EHO04170.1| DNA polymerase I [Escherichia coli B093]
gi|375321086|gb|EHS66959.1| DNA polymerase I [Escherichia coli O157:H43 str. T22]
gi|377988276|gb|EHV51455.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC6B]
gi|377988817|gb|EHV51988.1| DNA polymerase I [Escherichia coli DEC6A]
gi|377991817|gb|EHV54966.1| DNA polymerase I [Escherichia coli DEC6C]
gi|378028339|gb|EHV90958.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC7B]
gi|378124368|gb|EHW85776.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC11A]
gi|378137843|gb|EHW99105.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC11B]
gi|378143858|gb|EHX05039.1| DNA polymerase I [Escherichia coli DEC11D]
gi|378145657|gb|EHX06814.1| DNA polymerase I [Escherichia coli DEC11C]
gi|378154412|gb|EHX15486.1| DNA polymerase I [Escherichia coli DEC11E]
gi|378161850|gb|EHX22824.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC12B]
gi|378164380|gb|EHX25325.1| DNA polymerase I [Escherichia coli DEC12A]
gi|378165175|gb|EHX26112.1| DNA polymerase I [Escherichia coli DEC12C]
gi|378179479|gb|EHX40205.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC12D]
gi|378182119|gb|EHX42773.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC12E]
gi|378234204|gb|EHX94283.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC15A]
gi|378239748|gb|EHX99727.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC15B]
gi|378242417|gb|EHY02370.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC15C]
gi|378250296|gb|EHY10201.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC15D]
gi|378254981|gb|EHY14840.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC15E]
gi|384377072|gb|EIE34970.1| DNA-directed DNA polymerase [Escherichia coli J53]
gi|384472339|gb|EIE56396.1| DNA-directed DNA polymerase [Escherichia coli AI27]
gi|385155230|gb|EIF17235.1| DNA polymerase I [Escherichia coli O32:H37 str. P4]
gi|385537437|gb|EIF84309.1| DNA polymerase I [Escherichia coli M919]
gi|385708228|gb|EIG45242.1| DNA polymerase I [Escherichia coli H730]
gi|385709080|gb|EIG46082.1| DNA polymerase I [Escherichia coli B799]
gi|386120525|gb|EIG69151.1| DNA polymerase I [Escherichia sp. 4_1_40B]
gi|386147961|gb|EIG94400.1| DNA-directed DNA polymerase [Escherichia coli 97.0246]
gi|386150127|gb|EIH01416.1| DNA-directed DNA polymerase [Escherichia coli 5.0588]
gi|386161030|gb|EIH22833.1| DNA-directed DNA polymerase [Escherichia coli 1.2264]
gi|386166595|gb|EIH33115.1| DNA-directed DNA polymerase [Escherichia coli 96.0497]
gi|386174350|gb|EIH46350.1| DNA-directed DNA polymerase [Escherichia coli 99.0741]
gi|386177719|gb|EIH55198.1| DNA-directed DNA polymerase [Escherichia coli 3.2608]
gi|386182765|gb|EIH65521.1| DNA-directed DNA polymerase [Escherichia coli 93.0624]
gi|386202154|gb|EII01145.1| DNA-directed DNA polymerase [Escherichia coli 96.154]
gi|386211878|gb|EII22329.1| DNA-directed DNA polymerase [Escherichia coli 9.0111]
gi|386219670|gb|EII36134.1| DNA-directed DNA polymerase [Escherichia coli 4.0967]
gi|386234545|gb|EII66523.1| DNA-directed DNA polymerase [Escherichia coli 2.4168]
gi|386237933|gb|EII74873.1| DNA-directed DNA polymerase [Escherichia coli 3.2303]
gi|386246017|gb|EII87747.1| DNA-directed DNA polymerase [Escherichia coli 3003]
gi|386251702|gb|EIJ01394.1| DNA-directed DNA polymerase [Escherichia coli B41]
gi|388334861|gb|EIL01442.1| DNA polymerase I [Escherichia coli O103:H25 str. CVM9340]
gi|388337025|gb|EIL03541.1| DNA polymerase I [Escherichia coli O103:H2 str. CVM9450]
gi|388406870|gb|EIL67252.1| DNA polymerase I [Escherichia coli 541-1]
gi|388410987|gb|EIL71180.1| DNA polymerase I [Escherichia coli 75]
gi|391277164|gb|EIQ35915.1| DNA polymerase I [Shigella sonnei 3226-85]
gi|391309398|gb|EIQ67068.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli EPEC C342-62]
gi|397782928|gb|EJK93791.1| DNA polymerase I [Escherichia coli STEC_O31]
gi|404335843|gb|EJZ62311.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Shigella flexneri 1485-80]
gi|408208645|gb|EKI33277.1| DNA polymerase I [Escherichia coli 3006]
gi|408457555|gb|EKJ81350.1| DNA-directed DNA polymerase [Escherichia coli AD30]
gi|408563865|gb|EKK39986.1| DNA polymerase I [Escherichia coli 8.0569]
gi|430895602|gb|ELC17864.1| DNA polymerase I [Escherichia coli KTE12]
gi|430913383|gb|ELC34505.1| DNA polymerase I [Escherichia coli KTE21]
gi|431003008|gb|ELD18495.1| DNA polymerase I [Escherichia coli KTE210]
gi|431059830|gb|ELD69177.1| DNA polymerase I [Escherichia coli KTE233]
gi|431066733|gb|ELD75356.1| DNA polymerase I [Escherichia coli KTE234]
gi|431070211|gb|ELD78517.1| DNA polymerase I [Escherichia coli KTE236]
gi|431075321|gb|ELD82843.1| DNA polymerase I [Escherichia coli KTE237]
gi|431155378|gb|ELE56134.1| DNA polymerase I [Escherichia coli KTE76]
gi|431159909|gb|ELE60452.1| DNA polymerase I [Escherichia coli KTE77]
gi|431175768|gb|ELE75758.1| DNA polymerase I [Escherichia coli KTE81]
gi|431196545|gb|ELE95471.1| DNA polymerase I [Escherichia coli KTE111]
gi|431207064|gb|ELF05372.1| DNA polymerase I [Escherichia coli KTE119]
gi|431209703|gb|ELF07774.1| DNA polymerase I [Escherichia coli KTE142]
gi|431234211|gb|ELF29618.1| DNA polymerase I [Escherichia coli KTE161]
gi|431239775|gb|ELF34245.1| DNA polymerase I [Escherichia coli KTE171]
gi|431289832|gb|ELF80563.1| DNA polymerase I [Escherichia coli KTE42]
gi|431293243|gb|ELF83623.1| DNA polymerase I [Escherichia coli KTE29]
gi|431315051|gb|ELG02979.1| DNA polymerase I [Escherichia coli KTE48]
gi|431352273|gb|ELG39051.1| DNA polymerase I [Escherichia coli KTE91]
gi|431380854|gb|ELG65490.1| DNA polymerase I [Escherichia coli KTE136]
gi|431381789|gb|ELG66140.1| DNA polymerase I [Escherichia coli KTE135]
gi|431458841|gb|ELH39160.1| DNA polymerase I [Escherichia coli KTE184]
gi|431466770|gb|ELH46787.1| DNA polymerase I [Escherichia coli KTE196]
gi|431477121|gb|ELH56892.1| DNA polymerase I [Escherichia coli KTE197]
gi|431551890|gb|ELI25854.1| DNA polymerase I [Escherichia coli KTE117]
gi|431606368|gb|ELI75745.1| DNA polymerase I [Escherichia coli KTE138]
gi|431712800|gb|ELJ77077.1| DNA polymerase I [Escherichia coli KTE90]
gi|441603992|emb|CCP98800.1| DNA polymerase I [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|441652787|emb|CCQ04105.1| DNA polymerase I [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|449314085|gb|EMD04264.1| DNA polymerase I [Escherichia coli S17]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|433050332|ref|ZP_20237648.1| DNA polymerase I [Escherichia coli KTE120]
gi|431561430|gb|ELI34800.1| DNA polymerase I [Escherichia coli KTE120]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432871788|ref|ZP_20091782.1| DNA polymerase I [Escherichia coli KTE147]
gi|431407283|gb|ELG90495.1| DNA polymerase I [Escherichia coli KTE147]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432855927|ref|ZP_20083551.1| DNA polymerase I [Escherichia coli KTE144]
gi|431396612|gb|ELG80089.1| DNA polymerase I [Escherichia coli KTE144]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432716490|ref|ZP_19951502.1| DNA polymerase I [Escherichia coli KTE9]
gi|432795121|ref|ZP_20029191.1| DNA polymerase I [Escherichia coli KTE78]
gi|432796632|ref|ZP_20030664.1| DNA polymerase I [Escherichia coli KTE79]
gi|431269612|gb|ELF60918.1| DNA polymerase I [Escherichia coli KTE9]
gi|431335078|gb|ELG22220.1| DNA polymerase I [Escherichia coli KTE78]
gi|431347590|gb|ELG34473.1| DNA polymerase I [Escherichia coli KTE79]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432487613|ref|ZP_19729519.1| DNA polymerase I [Escherichia coli KTE212]
gi|433175750|ref|ZP_20360251.1| DNA polymerase I [Escherichia coli KTE232]
gi|431013445|gb|ELD27178.1| DNA polymerase I [Escherichia coli KTE212]
gi|431686990|gb|ELJ52543.1| DNA polymerase I [Escherichia coli KTE232]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432452124|ref|ZP_19694378.1| DNA polymerase I [Escherichia coli KTE193]
gi|433035787|ref|ZP_20223472.1| DNA polymerase I [Escherichia coli KTE112]
gi|430977274|gb|ELC94125.1| DNA polymerase I [Escherichia coli KTE193]
gi|431545537|gb|ELI20188.1| DNA polymerase I [Escherichia coli KTE112]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432383777|ref|ZP_19626700.1| DNA polymerase I [Escherichia coli KTE15]
gi|432613883|ref|ZP_19850038.1| DNA polymerase I [Escherichia coli KTE72]
gi|432648551|ref|ZP_19884334.1| DNA polymerase I [Escherichia coli KTE86]
gi|432658116|ref|ZP_19893811.1| DNA polymerase I [Escherichia coli KTE93]
gi|432940725|ref|ZP_20138599.1| DNA polymerase I [Escherichia coli KTE183]
gi|432987726|ref|ZP_20176435.1| DNA polymerase I [Escherichia coli KTE215]
gi|433103479|ref|ZP_20289545.1| DNA polymerase I [Escherichia coli KTE145]
gi|433190687|ref|ZP_20374770.1| DNA polymerase I [Escherichia coli KTE88]
gi|430902779|gb|ELC24583.1| DNA polymerase I [Escherichia coli KTE15]
gi|431145805|gb|ELE47410.1| DNA polymerase I [Escherichia coli KTE72]
gi|431177261|gb|ELE77193.1| DNA polymerase I [Escherichia coli KTE86]
gi|431187165|gb|ELE86678.1| DNA polymerase I [Escherichia coli KTE93]
gi|431459417|gb|ELH39711.1| DNA polymerase I [Escherichia coli KTE183]
gi|431493006|gb|ELH72601.1| DNA polymerase I [Escherichia coli KTE215]
gi|431615557|gb|ELI84685.1| DNA polymerase I [Escherichia coli KTE145]
gi|431701147|gb|ELJ66067.1| DNA polymerase I [Escherichia coli KTE88]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432367332|ref|ZP_19610443.1| DNA polymerase I [Escherichia coli KTE10]
gi|430890567|gb|ELC13196.1| DNA polymerase I [Escherichia coli KTE10]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|24115152|ref|NP_709662.1| DNA polymerase I [Shigella flexneri 2a str. 301]
gi|24054427|gb|AAN45369.1| DNA polymerase I, 3 --> 5 polymerase, 5 --> 3 and 3 --> 5
exonuclease [Shigella flexneri 2a str. 301]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|82546208|ref|YP_410155.1| DNA polymerase I [Shigella boydii Sb227]
gi|420355446|ref|ZP_14856510.1| DNA polymerase I [Shigella boydii 4444-74]
gi|81247619|gb|ABB68327.1| DNA polymerase I [Shigella boydii Sb227]
gi|391272350|gb|EIQ31204.1| DNA polymerase I [Shigella boydii 4444-74]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|30064847|ref|NP_839018.1| DNA polymerase I [Shigella flexneri 2a str. 2457T]
gi|384545465|ref|YP_005729529.1| DNA polymerase I, 3--> 5 polymerase, 5--> 3 and 3--> 5 exonuclease
[Shigella flexneri 2002017]
gi|417725276|ref|ZP_12374065.1| DNA polymerase I [Shigella flexneri K-304]
gi|417730558|ref|ZP_12379243.1| DNA polymerase I [Shigella flexneri K-671]
gi|417735536|ref|ZP_12384177.1| DNA polymerase I [Shigella flexneri 2747-71]
gi|420343956|ref|ZP_14845419.1| DNA polymerase I [Shigella flexneri K-404]
gi|30043107|gb|AAP18829.1| DNA polymerase I [Shigella flexneri 2a str. 2457T]
gi|281603252|gb|ADA76236.1| DNA polymerase I, 3--> 5 polymerase, 5--> 3 and 3--> 5 exonuclease
[Shigella flexneri 2002017]
gi|332751499|gb|EGJ81900.1| DNA polymerase I [Shigella flexneri K-671]
gi|332753203|gb|EGJ83586.1| DNA polymerase I [Shigella flexneri 2747-71]
gi|333013930|gb|EGK33292.1| DNA polymerase I [Shigella flexneri K-304]
gi|391263277|gb|EIQ22287.1| DNA polymerase I [Shigella flexneri K-404]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|420333477|ref|ZP_14835115.1| DNA polymerase I [Shigella flexneri K-1770]
gi|391245445|gb|EIQ04713.1| DNA polymerase I [Shigella flexneri K-1770]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|419702721|ref|ZP_14230308.1| DNA polymerase I [Escherichia coli SCI-07]
gi|380346091|gb|EIA34392.1| DNA polymerase I [Escherichia coli SCI-07]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|422835409|ref|ZP_16883464.1| DNA polymerase I [Escherichia coli E101]
gi|371612389|gb|EHO00900.1| DNA polymerase I [Escherichia coli E101]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417521735|ref|ZP_12183371.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353640722|gb|EHC85637.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
Length = 489
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 23 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 77
>gi|417631342|ref|ZP_12281572.1| DNA polymerase I [Escherichia coli STEC_MHI813]
gi|345368991|gb|EGX00980.1| DNA polymerase I [Escherichia coli STEC_MHI813]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|422784554|ref|ZP_16837333.1| DNA polymerase I [Escherichia coli TW10509]
gi|323974266|gb|EGB69395.1| DNA polymerase I [Escherichia coli TW10509]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|416298142|ref|ZP_11651859.1| DNA polymerase I [Shigella flexneri CDC 796-83]
gi|420327809|ref|ZP_14829548.1| DNA polymerase I [Shigella flexneri CCH060]
gi|320185486|gb|EFW60254.1| DNA polymerase I [Shigella flexneri CDC 796-83]
gi|391246194|gb|EIQ05456.1| DNA polymerase I [Shigella flexneri CCH060]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|331649706|ref|ZP_08350786.1| DNA polymerase I (POL I) [Escherichia coli M605]
gi|417664507|ref|ZP_12314086.1| DNA polymerase 1 [Escherichia coli AA86]
gi|330908181|gb|EGH36700.1| DNA polymerase 1 [Escherichia coli AA86]
gi|331041339|gb|EGI13489.1| DNA polymerase I (POL I) [Escherichia coli M605]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|307314016|ref|ZP_07593630.1| DNA polymerase I [Escherichia coli W]
gi|378715226|ref|YP_005280119.1| DNA polymerase I [Escherichia coli KO11FL]
gi|386611232|ref|YP_006126718.1| DNA polymerase I [Escherichia coli W]
gi|386699364|ref|YP_006163201.1| DNA polymerase I [Escherichia coli KO11FL]
gi|386711766|ref|YP_006175487.1| DNA polymerase I [Escherichia coli W]
gi|306906333|gb|EFN36849.1| DNA polymerase I [Escherichia coli W]
gi|315063149|gb|ADT77476.1| DNA polymerase I [Escherichia coli W]
gi|323380787|gb|ADX53055.1| DNA polymerase I [Escherichia coli KO11FL]
gi|383390891|gb|AFH15849.1| DNA polymerase I [Escherichia coli KO11FL]
gi|383407458|gb|AFH13701.1| DNA polymerase I [Escherichia coli W]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|306813871|ref|ZP_07448047.1| DNA polymerase I [Escherichia coli NC101]
gi|432384792|ref|ZP_19627699.1| DNA polymerase I [Escherichia coli KTE16]
gi|432907725|ref|ZP_20116085.1| DNA polymerase I [Escherichia coli KTE194]
gi|432969455|ref|ZP_20158362.1| DNA polymerase I [Escherichia coli KTE207]
gi|433040897|ref|ZP_20228480.1| DNA polymerase I [Escherichia coli KTE113]
gi|433084808|ref|ZP_20271250.1| DNA polymerase I [Escherichia coli KTE133]
gi|305852869|gb|EFM53316.1| DNA polymerase I [Escherichia coli NC101]
gi|430911744|gb|ELC33013.1| DNA polymerase I [Escherichia coli KTE16]
gi|431425854|gb|ELH07900.1| DNA polymerase I [Escherichia coli KTE194]
gi|431489979|gb|ELH69602.1| DNA polymerase I [Escherichia coli KTE207]
gi|431547607|gb|ELI21903.1| DNA polymerase I [Escherichia coli KTE113]
gi|431597104|gb|ELI67017.1| DNA polymerase I [Escherichia coli KTE133]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|300931708|ref|ZP_07147013.1| DNA-directed DNA polymerase [Escherichia coli MS 187-1]
gi|300460499|gb|EFK23992.1| DNA-directed DNA polymerase [Escherichia coli MS 187-1]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|301023768|ref|ZP_07187505.1| DNA-directed DNA polymerase [Escherichia coli MS 69-1]
gi|419921133|ref|ZP_14439228.1| DNA polymerase I [Escherichia coli KD2]
gi|300396890|gb|EFJ80428.1| DNA-directed DNA polymerase [Escherichia coli MS 69-1]
gi|388383196|gb|EIL44983.1| DNA polymerase I [Escherichia coli KD2]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|297518776|ref|ZP_06937162.1| DNA polymerase I [Escherichia coli OP50]
Length = 665
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|293417324|ref|ZP_06659948.1| DNA polymerase I [Escherichia coli B185]
gi|291430844|gb|EFF03840.1| DNA polymerase I [Escherichia coli B185]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|387609665|ref|YP_006098521.1| DNA polymerase I [Escherichia coli 042]
gi|284923965|emb|CBG37064.1| DNA polymerase I [Escherichia coli 042]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|227885402|ref|ZP_04003207.1| DNA polymerase I [Escherichia coli 83972]
gi|300937085|ref|ZP_07151949.1| DNA-directed DNA polymerase [Escherichia coli MS 21-1]
gi|300976637|ref|ZP_07173526.1| DNA-directed DNA polymerase [Escherichia coli MS 45-1]
gi|301046666|ref|ZP_07193796.1| DNA-directed DNA polymerase [Escherichia coli MS 185-1]
gi|386621499|ref|YP_006141079.1| DNA polymerase I [Escherichia coli NA114]
gi|386631826|ref|YP_006151546.1| exonuclease IX [Escherichia coli str. 'clone D i2']
gi|386636746|ref|YP_006156465.1| exonuclease IX [Escherichia coli str. 'clone D i14']
gi|386641513|ref|YP_006108311.1| DNA polymerase I [Escherichia coli ABU 83972]
gi|417287474|ref|ZP_12074760.1| DNA-directed DNA polymerase [Escherichia coli TW07793]
gi|422364493|ref|ZP_16445009.1| DNA-directed DNA polymerase [Escherichia coli MS 153-1]
gi|432414174|ref|ZP_19656824.1| DNA polymerase I [Escherichia coli KTE39]
gi|432424282|ref|ZP_19666817.1| DNA polymerase I [Escherichia coli KTE178]
gi|432434136|ref|ZP_19676555.1| DNA polymerase I [Escherichia coli KTE187]
gi|432438837|ref|ZP_19681212.1| DNA polymerase I [Escherichia coli KTE188]
gi|432459022|ref|ZP_19701194.1| DNA polymerase I [Escherichia coli KTE201]
gi|432493131|ref|ZP_19734959.1| DNA polymerase I [Escherichia coli KTE214]
gi|432506772|ref|ZP_19748488.1| DNA polymerase I [Escherichia coli KTE220]
gi|432526353|ref|ZP_19763463.1| DNA polymerase I [Escherichia coli KTE230]
gi|432561148|ref|ZP_19797798.1| DNA polymerase I [Escherichia coli KTE49]
gi|432571154|ref|ZP_19807657.1| DNA polymerase I [Escherichia coli KTE53]
gi|432595133|ref|ZP_19831441.1| DNA polymerase I [Escherichia coli KTE60]
gi|432605317|ref|ZP_19841525.1| DNA polymerase I [Escherichia coli KTE67]
gi|432653533|ref|ZP_19889269.1| DNA polymerase I [Escherichia coli KTE87]
gi|432682655|ref|ZP_19918005.1| DNA polymerase I [Escherichia coli KTE143]
gi|432708272|ref|ZP_19943346.1| DNA polymerase I [Escherichia coli KTE6]
gi|432781201|ref|ZP_20015410.1| DNA polymerase I [Escherichia coli KTE63]
gi|432799771|ref|ZP_20033771.1| DNA polymerase I [Escherichia coli KTE84]
gi|432847117|ref|ZP_20079611.1| DNA polymerase I [Escherichia coli KTE141]
gi|432891500|ref|ZP_20104191.1| DNA polymerase I [Escherichia coli KTE165]
gi|432976103|ref|ZP_20164934.1| DNA polymerase I [Escherichia coli KTE209]
gi|432993083|ref|ZP_20181713.1| DNA polymerase I [Escherichia coli KTE218]
gi|433002280|ref|ZP_20190795.1| DNA polymerase I [Escherichia coli KTE223]
gi|433060405|ref|ZP_20247433.1| DNA polymerase I [Escherichia coli KTE124]
gi|433089610|ref|ZP_20275964.1| DNA polymerase I [Escherichia coli KTE137]
gi|433117813|ref|ZP_20303589.1| DNA polymerase I [Escherichia coli KTE153]
gi|433127515|ref|ZP_20313052.1| DNA polymerase I [Escherichia coli KTE160]
gi|433141588|ref|ZP_20326822.1| DNA polymerase I [Escherichia coli KTE167]
gi|433151540|ref|ZP_20336533.1| DNA polymerase I [Escherichia coli KTE174]
gi|433210033|ref|ZP_20393692.1| DNA polymerase I [Escherichia coli KTE97]
gi|433214912|ref|ZP_20398482.1| DNA polymerase I [Escherichia coli KTE99]
gi|442607185|ref|ZP_21021974.1| DNA polymerase I [Escherichia coli Nissle 1917]
gi|227837660|gb|EEJ48126.1| DNA polymerase I [Escherichia coli 83972]
gi|300301386|gb|EFJ57771.1| DNA-directed DNA polymerase [Escherichia coli MS 185-1]
gi|300410020|gb|EFJ93558.1| DNA-directed DNA polymerase [Escherichia coli MS 45-1]
gi|300457842|gb|EFK21335.1| DNA-directed DNA polymerase [Escherichia coli MS 21-1]
gi|307556005|gb|ADN48780.1| DNA polymerase I [Escherichia coli ABU 83972]
gi|315292801|gb|EFU52153.1| DNA-directed DNA polymerase [Escherichia coli MS 153-1]
gi|333972000|gb|AEG38805.1| DNA polymerase I [Escherichia coli NA114]
gi|355422725|gb|AER86922.1| exonuclease IX [Escherichia coli str. 'clone D i2']
gi|355427645|gb|AER91841.1| exonuclease IX [Escherichia coli str. 'clone D i14']
gi|386248259|gb|EII94431.1| DNA-directed DNA polymerase [Escherichia coli TW07793]
gi|430932134|gb|ELC52567.1| DNA polymerase I [Escherichia coli KTE39]
gi|430941335|gb|ELC61488.1| DNA polymerase I [Escherichia coli KTE178]
gi|430949673|gb|ELC69100.1| DNA polymerase I [Escherichia coli KTE187]
gi|430959557|gb|ELC77874.1| DNA polymerase I [Escherichia coli KTE188]
gi|430978834|gb|ELC95628.1| DNA polymerase I [Escherichia coli KTE201]
gi|431030755|gb|ELD43761.1| DNA polymerase I [Escherichia coli KTE214]
gi|431034507|gb|ELD46438.1| DNA polymerase I [Escherichia coli KTE220]
gi|431047137|gb|ELD57143.1| DNA polymerase I [Escherichia coli KTE230]
gi|431088066|gb|ELD93971.1| DNA polymerase I [Escherichia coli KTE49]
gi|431096778|gb|ELE02238.1| DNA polymerase I [Escherichia coli KTE53]
gi|431125390|gb|ELE27805.1| DNA polymerase I [Escherichia coli KTE60]
gi|431143842|gb|ELE45556.1| DNA polymerase I [Escherichia coli KTE67]
gi|431186650|gb|ELE86190.1| DNA polymerase I [Escherichia coli KTE87]
gi|431216927|gb|ELF14519.1| DNA polymerase I [Escherichia coli KTE143]
gi|431254716|gb|ELF47984.1| DNA polymerase I [Escherichia coli KTE6]
gi|431333918|gb|ELG21094.1| DNA polymerase I [Escherichia coli KTE63]
gi|431353976|gb|ELG40727.1| DNA polymerase I [Escherichia coli KTE84]
gi|431391752|gb|ELG75358.1| DNA polymerase I [Escherichia coli KTE141]
gi|431429602|gb|ELH11527.1| DNA polymerase I [Escherichia coli KTE165]
gi|431485237|gb|ELH64901.1| DNA polymerase I [Escherichia coli KTE209]
gi|431503843|gb|ELH82577.1| DNA polymerase I [Escherichia coli KTE223]
gi|431513852|gb|ELH91931.1| DNA polymerase I [Escherichia coli KTE218]
gi|431565348|gb|ELI38481.1| DNA polymerase I [Escherichia coli KTE124]
gi|431600133|gb|ELI69809.1| DNA polymerase I [Escherichia coli KTE137]
gi|431630020|gb|ELI98362.1| DNA polymerase I [Escherichia coli KTE153]
gi|431639519|gb|ELJ07375.1| DNA polymerase I [Escherichia coli KTE160]
gi|431655070|gb|ELJ22111.1| DNA polymerase I [Escherichia coli KTE167]
gi|431666577|gb|ELJ33205.1| DNA polymerase I [Escherichia coli KTE174]
gi|431727834|gb|ELJ91569.1| DNA polymerase I [Escherichia coli KTE97]
gi|431731156|gb|ELJ94666.1| DNA polymerase I [Escherichia coli KTE99]
gi|441711644|emb|CCQ07951.1| DNA polymerase I [Escherichia coli Nissle 1917]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|218707489|ref|YP_002415008.1| DNA polymerase I [Escherichia coli UMN026]
gi|293407483|ref|ZP_06651402.1| DNA polymerase I [Escherichia coli FVEC1412]
gi|298383226|ref|ZP_06992819.1| DNA polymerase I [Escherichia coli FVEC1302]
gi|300896902|ref|ZP_07115390.1| DNA-directed DNA polymerase [Escherichia coli MS 198-1]
gi|419931853|ref|ZP_14449226.1| DNA polymerase I [Escherichia coli 576-1]
gi|422334909|ref|ZP_16415913.1| DNA polymerase I [Escherichia coli 4_1_47FAA]
gi|432355894|ref|ZP_19599153.1| DNA polymerase I [Escherichia coli KTE2]
gi|432404259|ref|ZP_19647000.1| DNA polymerase I [Escherichia coli KTE26]
gi|432428526|ref|ZP_19671004.1| DNA polymerase I [Escherichia coli KTE181]
gi|432463227|ref|ZP_19705356.1| DNA polymerase I [Escherichia coli KTE204]
gi|432478222|ref|ZP_19720205.1| DNA polymerase I [Escherichia coli KTE208]
gi|432491694|ref|ZP_19733551.1| DNA polymerase I [Escherichia coli KTE213]
gi|432520075|ref|ZP_19757252.1| DNA polymerase I [Escherichia coli KTE228]
gi|432540243|ref|ZP_19777132.1| DNA polymerase I [Escherichia coli KTE235]
gi|432633807|ref|ZP_19869722.1| DNA polymerase I [Escherichia coli KTE80]
gi|432643459|ref|ZP_19879278.1| DNA polymerase I [Escherichia coli KTE83]
gi|432663581|ref|ZP_19899189.1| DNA polymerase I [Escherichia coli KTE116]
gi|432768236|ref|ZP_20002625.1| DNA polymerase I [Escherichia coli KTE50]
gi|432772636|ref|ZP_20006945.1| DNA polymerase I [Escherichia coli KTE54]
gi|432841719|ref|ZP_20075172.1| DNA polymerase I [Escherichia coli KTE140]
gi|432882609|ref|ZP_20098331.1| DNA polymerase I [Escherichia coli KTE158]
gi|432915527|ref|ZP_20120782.1| DNA polymerase I [Escherichia coli KTE190]
gi|432964712|ref|ZP_20153737.1| DNA polymerase I [Escherichia coli KTE202]
gi|433021116|ref|ZP_20209190.1| DNA polymerase I [Escherichia coli KTE105]
gi|433055490|ref|ZP_20242640.1| DNA polymerase I [Escherichia coli KTE122]
gi|433065332|ref|ZP_20252231.1| DNA polymerase I [Escherichia coli KTE125]
gi|433070226|ref|ZP_20256985.1| DNA polymerase I [Escherichia coli KTE128]
gi|433161016|ref|ZP_20345828.1| DNA polymerase I [Escherichia coli KTE177]
gi|433180735|ref|ZP_20365104.1| DNA polymerase I [Escherichia coli KTE82]
gi|433205616|ref|ZP_20389355.1| DNA polymerase I [Escherichia coli KTE95]
gi|218434586|emb|CAR15515.1| fused DNA polymerase I 5'->3' exonuclease ; 3'->5' polymerase ;
3'->5' exonuclease [Escherichia coli UMN026]
gi|291425400|gb|EFE98439.1| DNA polymerase I [Escherichia coli FVEC1412]
gi|298276260|gb|EFI17780.1| DNA polymerase I [Escherichia coli FVEC1302]
gi|300359277|gb|EFJ75147.1| DNA-directed DNA polymerase [Escherichia coli MS 198-1]
gi|373244191|gb|EHP63681.1| DNA polymerase I [Escherichia coli 4_1_47FAA]
gi|388420338|gb|EIL80034.1| DNA polymerase I [Escherichia coli 576-1]
gi|430871724|gb|ELB95351.1| DNA polymerase I [Escherichia coli KTE2]
gi|430922333|gb|ELC43089.1| DNA polymerase I [Escherichia coli KTE26]
gi|430950049|gb|ELC69440.1| DNA polymerase I [Escherichia coli KTE181]
gi|430984932|gb|ELD01542.1| DNA polymerase I [Escherichia coli KTE204]
gi|431001523|gb|ELD17104.1| DNA polymerase I [Escherichia coli KTE208]
gi|431016941|gb|ELD30460.1| DNA polymerase I [Escherichia coli KTE213]
gi|431047187|gb|ELD57192.1| DNA polymerase I [Escherichia coli KTE228]
gi|431066391|gb|ELD75020.1| DNA polymerase I [Escherichia coli KTE235]
gi|431166622|gb|ELE66929.1| DNA polymerase I [Escherichia coli KTE80]
gi|431176614|gb|ELE76557.1| DNA polymerase I [Escherichia coli KTE83]
gi|431206194|gb|ELF04619.1| DNA polymerase I [Escherichia coli KTE116]
gi|431321500|gb|ELG09101.1| DNA polymerase I [Escherichia coli KTE50]
gi|431323058|gb|ELG10611.1| DNA polymerase I [Escherichia coli KTE54]
gi|431384771|gb|ELG68773.1| DNA polymerase I [Escherichia coli KTE140]
gi|431422951|gb|ELH05081.1| DNA polymerase I [Escherichia coli KTE158]
gi|431435129|gb|ELH16742.1| DNA polymerase I [Escherichia coli KTE190]
gi|431467009|gb|ELH47021.1| DNA polymerase I [Escherichia coli KTE202]
gi|431526282|gb|ELI03039.1| DNA polymerase I [Escherichia coli KTE105]
gi|431565150|gb|ELI38292.1| DNA polymerase I [Escherichia coli KTE122]
gi|431577389|gb|ELI50024.1| DNA polymerase I [Escherichia coli KTE125]
gi|431578256|gb|ELI50867.1| DNA polymerase I [Escherichia coli KTE128]
gi|431672917|gb|ELJ39150.1| DNA polymerase I [Escherichia coli KTE177]
gi|431697508|gb|ELJ62617.1| DNA polymerase I [Escherichia coli KTE82]
gi|431715344|gb|ELJ79509.1| DNA polymerase I [Escherichia coli KTE95]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|218692150|ref|YP_002400362.1| DNA polymerase I [Escherichia coli ED1a]
gi|432443411|ref|ZP_19685741.1| DNA polymerase I [Escherichia coli KTE189]
gi|432448554|ref|ZP_19690848.1| DNA polymerase I [Escherichia coli KTE191]
gi|433016201|ref|ZP_20204523.1| DNA polymerase I [Escherichia coli KTE104]
gi|433025790|ref|ZP_20213753.1| DNA polymerase I [Escherichia coli KTE106]
gi|433326840|ref|ZP_20403528.1| DNA polymerase I [Escherichia coli J96]
gi|218429714|emb|CAV18034.1| fused DNA polymerase I 5'->3' exonuclease ; 3'->5' polymerase ;
3'->5' exonuclease [Escherichia coli ED1a]
gi|430961855|gb|ELC79854.1| DNA polymerase I [Escherichia coli KTE189]
gi|430970239|gb|ELC87311.1| DNA polymerase I [Escherichia coli KTE191]
gi|431525713|gb|ELI02494.1| DNA polymerase I [Escherichia coli KTE104]
gi|431529957|gb|ELI06647.1| DNA polymerase I [Escherichia coli KTE106]
gi|432345234|gb|ELL39752.1| DNA polymerase I [Escherichia coli J96]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|218701437|ref|YP_002409066.1| DNA polymerase I [Escherichia coli IAI39]
gi|386626765|ref|YP_006146493.1| fused DNA polymerase I 5'-3' polymerase/3'-5' exonuclease/5'-3'
exonuclease [Escherichia coli O7:K1 str. CE10]
gi|218371423|emb|CAR19256.1| fused DNA polymerase I 5'->3' exonuclease ; 3'->5' polymerase ;
3'->5' exonuclease [Escherichia coli IAI39]
gi|349740501|gb|AEQ15207.1| fused DNA polymerase I 5'-3' polymerase/3'-5' exonuclease/5'-3'
exonuclease [Escherichia coli O7:K1 str. CE10]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|170769667|ref|ZP_02904120.1| DNA polymerase I [Escherichia albertii TW07627]
gi|170121475|gb|EDS90406.1| DNA polymerase I [Escherichia albertii TW07627]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|170683498|ref|YP_001746191.1| DNA polymerase I [Escherichia coli SMS-3-5]
gi|170521216|gb|ACB19394.1| DNA polymerase I [Escherichia coli SMS-3-5]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|110807452|ref|YP_690972.1| DNA polymerase I [Shigella flexneri 5 str. 8401]
gi|424839834|ref|ZP_18264471.1| DNA polymerase I [Shigella flexneri 5a str. M90T]
gi|110617000|gb|ABF05667.1| DNA polymerase I [Shigella flexneri 5 str. 8401]
gi|383468886|gb|EID63907.1| DNA polymerase I [Shigella flexneri 5a str. M90T]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|110644203|ref|YP_671933.1| DNA polymerase I [Escherichia coli 536]
gi|191173870|ref|ZP_03035390.1| DNA polymerase I [Escherichia coli F11]
gi|300985836|ref|ZP_07177621.1| DNA-directed DNA polymerase [Escherichia coli MS 200-1]
gi|419911928|ref|ZP_14430389.1| DNA polymerase I [Escherichia coli KD1]
gi|422376112|ref|ZP_16456365.1| DNA-directed DNA polymerase [Escherichia coli MS 60-1]
gi|422381926|ref|ZP_16462089.1| DNA-directed DNA polymerase [Escherichia coli MS 57-2]
gi|432395267|ref|ZP_19638064.1| DNA polymerase I [Escherichia coli KTE25]
gi|432408949|ref|ZP_19651649.1| DNA polymerase I [Escherichia coli KTE28]
gi|432468218|ref|ZP_19710293.1| DNA polymerase I [Escherichia coli KTE205]
gi|432473232|ref|ZP_19715266.1| DNA polymerase I [Escherichia coli KTE206]
gi|432556112|ref|ZP_19792825.1| DNA polymerase I [Escherichia coli KTE47]
gi|432585407|ref|ZP_19821796.1| DNA polymerase I [Escherichia coli KTE57]
gi|432715737|ref|ZP_19950760.1| DNA polymerase I [Escherichia coli KTE8]
gi|432725345|ref|ZP_19960257.1| DNA polymerase I [Escherichia coli KTE17]
gi|432729953|ref|ZP_19964824.1| DNA polymerase I [Escherichia coli KTE18]
gi|432734632|ref|ZP_19969452.1| DNA polymerase I [Escherichia coli KTE45]
gi|432743642|ref|ZP_19978354.1| DNA polymerase I [Escherichia coli KTE23]
gi|432761717|ref|ZP_19996203.1| DNA polymerase I [Escherichia coli KTE46]
gi|432988374|ref|ZP_20177051.1| DNA polymerase I [Escherichia coli KTE217]
gi|433075166|ref|ZP_20261797.1| DNA polymerase I [Escherichia coli KTE129]
gi|433080091|ref|ZP_20266604.1| DNA polymerase I [Escherichia coli KTE131]
gi|433113155|ref|ZP_20299000.1| DNA polymerase I [Escherichia coli KTE150]
gi|433122497|ref|ZP_20308149.1| DNA polymerase I [Escherichia coli KTE157]
gi|433185623|ref|ZP_20369853.1| DNA polymerase I [Escherichia coli KTE85]
gi|433200644|ref|ZP_20384523.1| DNA polymerase I [Escherichia coli KTE94]
gi|110345795|gb|ABG72032.1| DNA polymerase I [Escherichia coli 536]
gi|190905828|gb|EDV65447.1| DNA polymerase I [Escherichia coli F11]
gi|300306506|gb|EFJ61026.1| DNA-directed DNA polymerase [Escherichia coli MS 200-1]
gi|324006871|gb|EGB76090.1| DNA-directed DNA polymerase [Escherichia coli MS 57-2]
gi|324012590|gb|EGB81809.1| DNA-directed DNA polymerase [Escherichia coli MS 60-1]
gi|388392439|gb|EIL53857.1| DNA polymerase I [Escherichia coli KD1]
gi|430920118|gb|ELC41028.1| DNA polymerase I [Escherichia coli KTE25]
gi|430925757|gb|ELC46359.1| DNA polymerase I [Escherichia coli KTE28]
gi|430990375|gb|ELD06810.1| DNA polymerase I [Escherichia coli KTE205]
gi|430994985|gb|ELD11293.1| DNA polymerase I [Escherichia coli KTE206]
gi|431080073|gb|ELD86879.1| DNA polymerase I [Escherichia coli KTE47]
gi|431114039|gb|ELE17593.1| DNA polymerase I [Escherichia coli KTE57]
gi|431251139|gb|ELF45157.1| DNA polymerase I [Escherichia coli KTE8]
gi|431261652|gb|ELF53677.1| DNA polymerase I [Escherichia coli KTE17]
gi|431270346|gb|ELF61512.1| DNA polymerase I [Escherichia coli KTE45]
gi|431270396|gb|ELF61561.1| DNA polymerase I [Escherichia coli KTE18]
gi|431280671|gb|ELF71586.1| DNA polymerase I [Escherichia coli KTE23]
gi|431304983|gb|ELF93506.1| DNA polymerase I [Escherichia coli KTE46]
gi|431501567|gb|ELH80546.1| DNA polymerase I [Escherichia coli KTE217]
gi|431582029|gb|ELI54465.1| DNA polymerase I [Escherichia coli KTE129]
gi|431592627|gb|ELI63197.1| DNA polymerase I [Escherichia coli KTE131]
gi|431624098|gb|ELI92720.1| DNA polymerase I [Escherichia coli KTE150]
gi|431638293|gb|ELJ06331.1| DNA polymerase I [Escherichia coli KTE157]
gi|431701092|gb|ELJ66013.1| DNA polymerase I [Escherichia coli KTE85]
gi|431716480|gb|ELJ80592.1| DNA polymerase I [Escherichia coli KTE94]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432619180|ref|ZP_19855276.1| DNA polymerase I [Escherichia coli KTE75]
gi|431150112|gb|ELE51169.1| DNA polymerase I [Escherichia coli KTE75]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432604690|ref|ZP_19840915.1| DNA polymerase I [Escherichia coli KTE66]
gi|431136420|gb|ELE38288.1| DNA polymerase I [Escherichia coli KTE66]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|432516269|ref|ZP_19753482.1| DNA polymerase I [Escherichia coli KTE224]
gi|432701395|ref|ZP_19936537.1| DNA polymerase I [Escherichia coli KTE169]
gi|433146518|ref|ZP_20331645.1| DNA polymerase I [Escherichia coli KTE168]
gi|431037752|gb|ELD48727.1| DNA polymerase I [Escherichia coli KTE224]
gi|431239483|gb|ELF33960.1| DNA polymerase I [Escherichia coli KTE169]
gi|431656828|gb|ELJ23802.1| DNA polymerase I [Escherichia coli KTE168]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|418259220|ref|ZP_12882222.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Shigella flexneri 6603-63]
gi|397894872|gb|EJL11312.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Shigella flexneri 6603-63]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417829955|ref|ZP_12476495.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Shigella flexneri J1713]
gi|420322608|ref|ZP_14824428.1| DNA polymerase I [Shigella flexneri 2850-71]
gi|335573637|gb|EGM59988.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Shigella flexneri J1713]
gi|391245345|gb|EIQ04618.1| DNA polymerase I [Shigella flexneri 2850-71]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417714586|ref|ZP_12363539.1| DNA polymerase I [Shigella flexneri K-272]
gi|332998506|gb|EGK18104.1| DNA polymerase I [Shigella flexneri K-272]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417704317|ref|ZP_12353416.1| DNA polymerase I [Shigella flexneri K-218]
gi|417740406|ref|ZP_12388975.1| DNA polymerase I [Shigella flexneri 4343-70]
gi|420376423|ref|ZP_14876171.1| DNA polymerase I [Shigella flexneri 1235-66]
gi|332751661|gb|EGJ82060.1| DNA polymerase I [Shigella flexneri 4343-70]
gi|332998620|gb|EGK18217.1| DNA polymerase I [Shigella flexneri K-218]
gi|391303794|gb|EIQ61624.1| DNA polymerase I [Shigella flexneri 1235-66]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|215489197|ref|YP_002331628.1| DNA polymerase I [Escherichia coli O127:H6 str. E2348/69]
gi|312969394|ref|ZP_07783596.1| DNA polymerase I [Escherichia coli 2362-75]
gi|417758306|ref|ZP_12406365.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC2B]
gi|418999442|ref|ZP_13547016.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC1A]
gi|419004684|ref|ZP_13552190.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC1B]
gi|419010365|ref|ZP_13557771.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC1C]
gi|419016069|ref|ZP_13563401.1| DNA polymerase I [Escherichia coli DEC1D]
gi|419020994|ref|ZP_13568289.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC1E]
gi|419026447|ref|ZP_13573657.1| DNA polymerase I [Escherichia coli DEC2A]
gi|419031598|ref|ZP_13578735.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC2C]
gi|419037245|ref|ZP_13584314.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC2D]
gi|419042293|ref|ZP_13589306.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC2E]
gi|215267269|emb|CAS11718.1| fused DNA polymerase I 5'->3' exonuclease/3'->5'polymerase/3'->5'
exonuclease [Escherichia coli O127:H6 str. E2348/69]
gi|312285941|gb|EFR13859.1| DNA polymerase I [Escherichia coli 2362-75]
gi|377838663|gb|EHU03773.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC1C]
gi|377838814|gb|EHU03923.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC1A]
gi|377841511|gb|EHU06576.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC1B]
gi|377852587|gb|EHU17503.1| DNA polymerase I [Escherichia coli DEC1D]
gi|377855678|gb|EHU20543.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC1E]
gi|377857526|gb|EHU22375.1| DNA polymerase I [Escherichia coli DEC2A]
gi|377870015|gb|EHU34709.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC2B]
gi|377871995|gb|EHU36649.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC2C]
gi|377873573|gb|EHU38206.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC2D]
gi|377885554|gb|EHU50048.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC2E]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|91213409|ref|YP_543395.1| DNA polymerase I [Escherichia coli UTI89]
gi|117626137|ref|YP_859460.1| DNA polymerase I [Escherichia coli APEC O1]
gi|218560939|ref|YP_002393852.1| DNA polymerase I [Escherichia coli S88]
gi|237702893|ref|ZP_04533374.1| DNA polymerase I [Escherichia sp. 3_2_53FAA]
gi|386601905|ref|YP_006103411.1| DNA polymerase I [Escherichia coli IHE3034]
gi|386606456|ref|YP_006112756.1| DNA polymerase I [Escherichia coli UM146]
gi|419944324|ref|ZP_14460828.1| DNA polymerase I [Escherichia coli HM605]
gi|422356620|ref|ZP_16437300.1| DNA-directed DNA polymerase [Escherichia coli MS 110-3]
gi|422751912|ref|ZP_16805818.1| DNA polymerase I [Escherichia coli H252]
gi|422841916|ref|ZP_16889884.1| DNA polymerase I [Escherichia coli H397]
gi|432360334|ref|ZP_19603544.1| DNA polymerase I [Escherichia coli KTE4]
gi|432365134|ref|ZP_19608286.1| DNA polymerase I [Escherichia coli KTE5]
gi|432576125|ref|ZP_19812591.1| DNA polymerase I [Escherichia coli KTE55]
gi|432590334|ref|ZP_19826683.1| DNA polymerase I [Escherichia coli KTE58]
gi|432598705|ref|ZP_19834979.1| DNA polymerase I [Escherichia coli KTE62]
gi|432756837|ref|ZP_19991379.1| DNA polymerase I [Escherichia coli KTE22]
gi|432781042|ref|ZP_20015256.1| DNA polymerase I [Escherichia coli KTE59]
gi|432789906|ref|ZP_20024031.1| DNA polymerase I [Escherichia coli KTE65]
gi|432818670|ref|ZP_20052390.1| DNA polymerase I [Escherichia coli KTE118]
gi|432824802|ref|ZP_20058464.1| DNA polymerase I [Escherichia coli KTE123]
gi|433002782|ref|ZP_20191289.1| DNA polymerase I [Escherichia coli KTE227]
gi|433010082|ref|ZP_20198491.1| DNA polymerase I [Escherichia coli KTE229]
gi|433156073|ref|ZP_20340994.1| DNA polymerase I [Escherichia coli KTE176]
gi|433165900|ref|ZP_20350621.1| DNA polymerase I [Escherichia coli KTE179]
gi|433170895|ref|ZP_20355507.1| DNA polymerase I [Escherichia coli KTE180]
gi|91074983|gb|ABE09864.1| DNA polymerase I [Escherichia coli UTI89]
gi|115515261|gb|ABJ03336.1| DNA polymerase I [Escherichia coli APEC O1]
gi|218367708|emb|CAR05497.1| fused DNA polymerase I 5'->3' exonuclease ; 3'->5' polymerase ;
3'->5' exonuclease [Escherichia coli S88]
gi|226902830|gb|EEH89089.1| DNA polymerase I [Escherichia sp. 3_2_53FAA]
gi|294492133|gb|ADE90889.1| DNA polymerase I [Escherichia coli IHE3034]
gi|307628940|gb|ADN73244.1| DNA polymerase I [Escherichia coli UM146]
gi|315289553|gb|EFU48946.1| DNA-directed DNA polymerase [Escherichia coli MS 110-3]
gi|323949358|gb|EGB45247.1| DNA polymerase I [Escherichia coli H252]
gi|371603613|gb|EHN92264.1| DNA polymerase I [Escherichia coli H397]
gi|388419205|gb|EIL78953.1| DNA polymerase I [Escherichia coli HM605]
gi|430872616|gb|ELB96214.1| DNA polymerase I [Escherichia coli KTE4]
gi|430882792|gb|ELC05862.1| DNA polymerase I [Escherichia coli KTE5]
gi|431104027|gb|ELE08634.1| DNA polymerase I [Escherichia coli KTE55]
gi|431117251|gb|ELE20513.1| DNA polymerase I [Escherichia coli KTE58]
gi|431130218|gb|ELE32327.1| DNA polymerase I [Escherichia coli KTE62]
gi|431299081|gb|ELF88657.1| DNA polymerase I [Escherichia coli KTE22]
gi|431323663|gb|ELG11135.1| DNA polymerase I [Escherichia coli KTE59]
gi|431334501|gb|ELG21659.1| DNA polymerase I [Escherichia coli KTE65]
gi|431373038|gb|ELG58698.1| DNA polymerase I [Escherichia coli KTE118]
gi|431377160|gb|ELG62293.1| DNA polymerase I [Escherichia coli KTE123]
gi|431520619|gb|ELH97940.1| DNA polymerase I [Escherichia coli KTE229]
gi|431521362|gb|ELH98608.1| DNA polymerase I [Escherichia coli KTE227]
gi|431669352|gb|ELJ35776.1| DNA polymerase I [Escherichia coli KTE176]
gi|431682917|gb|ELJ48562.1| DNA polymerase I [Escherichia coli KTE179]
gi|431683317|gb|ELJ48954.1| DNA polymerase I [Escherichia coli KTE180]
Length = 928
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|406939826|gb|EKD72766.1| hypothetical protein ACD_45C00589G0003 [uncultured bacterium]
Length = 898
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
FR TLY YK NRPP P+ ++Q + + I+A+ I +IE V +D G
Sbjct: 69 FRETLYEHYKANRPPMPNELIQQIAPIHEVIRALGIPLLIEEGVEADDVIG 119
>gi|381402205|ref|ZP_09927081.1| DNA polymerase I [Kingella kingae PYKK081]
gi|380832813|gb|EIC12705.1| DNA polymerase I [Kingella kingae PYKK081]
Length = 925
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G NFRH LY YK RPP PD + L + M KV++++ + D
Sbjct: 58 VFDAKGKNFRHALYEDYKATRPPMPDELRLQADMLPDLVDLMGWKVLKISGVEAD 112
>gi|57238779|ref|YP_179915.1| DNA polymerase I [Ehrlichia ruminantium str. Welgevonden]
gi|58578703|ref|YP_196915.1| DNA polymerase I [Ehrlichia ruminantium str. Welgevonden]
gi|57160858|emb|CAH57760.1| DNA polymerase I [Ehrlichia ruminantium str. Welgevonden]
gi|58417329|emb|CAI26533.1| DNA polymerase I (POL I) [Ehrlichia ruminantium str. Welgevonden]
Length = 865
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 34 YGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
+ G NFRH +YP YK+NR P+ ++ L+ ++ A++I EV
Sbjct: 62 FDTGGKNFRHDIYPQYKSNRIKLPEDLISQFPLLREAVNALNISYEEV 109
>gi|12002056|gb|AAG43170.1|AF071212_1 DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium]
Length = 928
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|392981360|ref|YP_006479948.1| DNA polymerase I [Enterobacter cloacae subsp. dissolvens SDM]
gi|392327293|gb|AFM62246.1| DNA polymerase I [Enterobacter cloacae subsp. dissolvens SDM]
Length = 930
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|334121891|ref|ZP_08495935.1| DNA-directed DNA polymerase I [Enterobacter hormaechei ATCC 49162]
gi|333392672|gb|EGK63773.1| DNA-directed DNA polymerase I [Enterobacter hormaechei ATCC 49162]
Length = 944
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 75 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 129
>gi|283787470|ref|YP_003367335.1| DNA polymerase I [Citrobacter rodentium ICC168]
gi|282950924|emb|CBG90601.1| DNA polymerase I [Citrobacter rodentium ICC168]
Length = 928
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|195940271|ref|ZP_03085653.1| DNA polymerase I, partial [Escherichia coli O157:H7 str. EC4024]
Length = 881
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|168467328|ref|ZP_02701165.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|200387731|ref|ZP_03214343.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|375003860|ref|ZP_09728197.1| DNA-directed DNA polymerase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|416427170|ref|ZP_11693393.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416432228|ref|ZP_11696062.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416435816|ref|ZP_11698029.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416448652|ref|ZP_11706479.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416452810|ref|ZP_11709241.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416461629|ref|ZP_11715418.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416464264|ref|ZP_11716284.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416473014|ref|ZP_11719631.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416488266|ref|ZP_11725733.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416502050|ref|ZP_11732537.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416547643|ref|ZP_11754665.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416580266|ref|ZP_11771749.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416587353|ref|ZP_11776007.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416592846|ref|ZP_11779563.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416600755|ref|ZP_11784646.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416605988|ref|ZP_11787390.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416616322|ref|ZP_11794003.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416622870|ref|ZP_11797171.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416633002|ref|ZP_11801698.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416645242|ref|ZP_11807353.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416649419|ref|ZP_11809836.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416659027|ref|ZP_11814622.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416664925|ref|ZP_11816377.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416679427|ref|ZP_11823090.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416694486|ref|ZP_11827197.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416704799|ref|ZP_11830490.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416710762|ref|ZP_11834739.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416718012|ref|ZP_11840201.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416723813|ref|ZP_11844438.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416729369|ref|ZP_11847951.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416742240|ref|ZP_11855709.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416743752|ref|ZP_11856326.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416758990|ref|ZP_11863958.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416764151|ref|ZP_11867808.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416770010|ref|ZP_11871413.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418484597|ref|ZP_13053593.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418491978|ref|ZP_13058480.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418494956|ref|ZP_13061402.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418499559|ref|ZP_13065964.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418505902|ref|ZP_13072244.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418506969|ref|ZP_13073296.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418526421|ref|ZP_13092398.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|418764086|ref|ZP_13320190.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418764408|ref|ZP_13320506.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418768917|ref|ZP_13324955.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418774545|ref|ZP_13330512.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418779832|ref|ZP_13335729.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418782628|ref|ZP_13338490.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418800409|ref|ZP_13356062.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|419786616|ref|ZP_14312340.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419792983|ref|ZP_14318612.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|195630257|gb|EDX48897.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|199604829|gb|EDZ03374.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|322613070|gb|EFY10020.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619141|gb|EFY16024.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322626007|gb|EFY22819.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626535|gb|EFY23341.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632354|gb|EFY29102.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635166|gb|EFY31887.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642757|gb|EFY39346.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647922|gb|EFY44394.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650672|gb|EFY47073.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322652855|gb|EFY49192.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322657170|gb|EFY53450.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322662344|gb|EFY58559.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322666879|gb|EFY63055.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672149|gb|EFY68264.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675871|gb|EFY71943.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681715|gb|EFY77741.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322684092|gb|EFY80101.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323193364|gb|EFZ78579.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197721|gb|EFZ82854.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323200707|gb|EFZ85778.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323211491|gb|EFZ96332.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323218464|gb|EGA03172.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323221056|gb|EGA05488.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226031|gb|EGA10250.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231711|gb|EGA15823.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236042|gb|EGA20120.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239538|gb|EGA23587.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323243870|gb|EGA27881.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323249232|gb|EGA33149.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323250526|gb|EGA34409.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258980|gb|EGA42632.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323260225|gb|EGA43848.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265344|gb|EGA48841.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270566|gb|EGA54012.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|353073935|gb|EHB39698.1| DNA-directed DNA polymerase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|366058624|gb|EHN22911.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366058752|gb|EHN23032.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366060618|gb|EHN24880.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366066589|gb|EHN30749.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366070674|gb|EHN34780.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366081930|gb|EHN45868.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366828757|gb|EHN55637.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372205753|gb|EHP19260.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|392618007|gb|EIX00421.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392621599|gb|EIX03953.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392730995|gb|EIZ88230.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392741083|gb|EIZ98193.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392743045|gb|EJA00122.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392750570|gb|EJA07531.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392751476|gb|EJA08426.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392759820|gb|EJA16663.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392783783|gb|EJA40393.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
Length = 928
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|198245003|ref|YP_002217922.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205354415|ref|YP_002228216.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207859193|ref|YP_002245844.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|238913940|ref|ZP_04657777.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|375125296|ref|ZP_09770460.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378957261|ref|YP_005214748.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|421359814|ref|ZP_15810102.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421362904|ref|ZP_15813155.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421365968|ref|ZP_15816176.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421373797|ref|ZP_15823936.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421376354|ref|ZP_15826462.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421380925|ref|ZP_15830986.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421383954|ref|ZP_15833984.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421389796|ref|ZP_15839778.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421395824|ref|ZP_15845757.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421400268|ref|ZP_15850155.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421402173|ref|ZP_15852034.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421409346|ref|ZP_15859137.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421410900|ref|ZP_15860671.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421417014|ref|ZP_15866732.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421419949|ref|ZP_15869632.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421428224|ref|ZP_15877839.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421431900|ref|ZP_15881478.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421436456|ref|ZP_15885985.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421440964|ref|ZP_15890435.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421445546|ref|ZP_15894968.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421448636|ref|ZP_15898028.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|436618498|ref|ZP_20514448.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436689026|ref|ZP_20518010.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436796223|ref|ZP_20522785.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436806375|ref|ZP_20526620.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436814324|ref|ZP_20532266.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436830311|ref|ZP_20535209.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436848506|ref|ZP_20540097.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436855092|ref|ZP_20544457.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436862070|ref|ZP_20548923.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436872199|ref|ZP_20555263.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436881571|ref|ZP_20560966.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436885642|ref|ZP_20562590.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436892878|ref|ZP_20566975.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436900275|ref|ZP_20571329.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436910838|ref|ZP_20576928.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436920828|ref|ZP_20583315.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436923065|ref|ZP_20584966.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436937431|ref|ZP_20592605.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436939923|ref|ZP_20594083.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436950222|ref|ZP_20599752.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436957849|ref|ZP_20602992.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436973170|ref|ZP_20610547.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436980241|ref|ZP_20613333.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436990628|ref|ZP_20617031.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437011330|ref|ZP_20624506.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437023386|ref|ZP_20629063.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437031476|ref|ZP_20631460.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437046186|ref|ZP_20638138.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437047685|ref|ZP_20639048.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437055140|ref|ZP_20643374.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437063720|ref|ZP_20648085.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437074191|ref|ZP_20653602.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437086340|ref|ZP_20660458.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437090480|ref|ZP_20662858.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437107156|ref|ZP_20667404.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437119613|ref|ZP_20670932.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437128211|ref|ZP_20675051.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437140218|ref|ZP_20682282.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437144996|ref|ZP_20685261.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437152357|ref|ZP_20690008.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437158719|ref|ZP_20693490.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437171864|ref|ZP_20700855.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437176222|ref|ZP_20703365.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437182394|ref|ZP_20707008.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437245577|ref|ZP_20714707.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437263996|ref|ZP_20719637.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437271831|ref|ZP_20724020.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437274917|ref|ZP_20725488.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437289590|ref|ZP_20731112.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437310646|ref|ZP_20735773.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437330241|ref|ZP_20741528.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437339758|ref|ZP_20744301.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437360265|ref|ZP_20748192.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437414849|ref|ZP_20753761.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437436194|ref|ZP_20756719.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437458747|ref|ZP_20760798.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437480480|ref|ZP_20768319.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437487832|ref|ZP_20770073.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437502622|ref|ZP_20774614.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437526663|ref|ZP_20779844.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437562331|ref|ZP_20786562.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437577525|ref|ZP_20790988.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437587069|ref|ZP_20793480.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437602786|ref|ZP_20798685.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437615031|ref|ZP_20802014.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437634776|ref|ZP_20807024.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437656446|ref|ZP_20810767.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437686339|ref|ZP_20819365.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437694031|ref|ZP_20821644.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437702963|ref|ZP_20824378.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437727464|ref|ZP_20830260.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437756169|ref|ZP_20834358.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437809821|ref|ZP_20840814.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|438009352|ref|ZP_20854422.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438083028|ref|ZP_20858100.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438098741|ref|ZP_20862963.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438108935|ref|ZP_20867200.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438141513|ref|ZP_20875061.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445137669|ref|ZP_21383601.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445156916|ref|ZP_21392872.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|445169569|ref|ZP_21395295.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445186553|ref|ZP_21399286.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445229099|ref|ZP_21404907.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445244284|ref|ZP_21408045.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445331879|ref|ZP_21414316.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445343976|ref|ZP_21417347.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445366481|ref|ZP_21425325.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|197939519|gb|ACH76852.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205274196|emb|CAR39214.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|206710996|emb|CAR35364.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|326629546|gb|EGE35889.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|357207872|gb|AET55918.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|395984318|gb|EJH93507.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395989029|gb|EJH98165.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395992501|gb|EJI01618.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395996123|gb|EJI05176.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396002569|gb|EJI11560.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396002713|gb|EJI11703.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396011747|gb|EJI20654.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396015726|gb|EJI24596.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396020941|gb|EJI29779.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396023876|gb|EJI32667.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396025136|gb|EJI33917.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396032841|gb|EJI41558.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396043650|gb|EJI52249.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396047189|gb|EJI55766.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396047309|gb|EJI55883.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396050051|gb|EJI58588.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396051723|gb|EJI60239.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396053046|gb|EJI61547.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396064566|gb|EJI72950.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396065129|gb|EJI73507.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396072583|gb|EJI80892.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|434939665|gb|ELL46444.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434961741|gb|ELL55007.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434965670|gb|ELL58593.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434969682|gb|ELL62373.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434974477|gb|ELL66845.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434983901|gb|ELL75675.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434989340|gb|ELL80892.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434993412|gb|ELL84836.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434999498|gb|ELL90673.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435000622|gb|ELL91766.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435002981|gb|ELL94023.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|435004087|gb|ELL95084.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435012967|gb|ELM03641.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435020083|gb|ELM10503.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435022227|gb|ELM12559.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435027335|gb|ELM17458.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435027613|gb|ELM17734.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435036067|gb|ELM25905.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435042569|gb|ELM32288.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435047229|gb|ELM36824.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435052817|gb|ELM42303.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435054760|gb|ELM44188.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435056400|gb|ELM45790.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435065056|gb|ELM54163.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435067757|gb|ELM56796.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435070159|gb|ELM59156.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435075348|gb|ELM64169.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435078942|gb|ELM67661.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435080800|gb|ELM69467.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435099236|gb|ELM87453.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435100312|gb|ELM88495.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435101838|gb|ELM89970.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435103763|gb|ELM91839.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435107135|gb|ELM95131.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435114484|gb|ELN02289.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435120948|gb|ELN08511.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435128913|gb|ELN16238.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435129255|gb|ELN16561.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435130276|gb|ELN17532.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435137854|gb|ELN24888.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435142844|gb|ELN29724.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435145519|gb|ELN32330.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435151011|gb|ELN37673.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435155999|gb|ELN42502.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435160377|gb|ELN46656.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435164443|gb|ELN50525.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435169615|gb|ELN55386.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435174024|gb|ELN59483.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435175509|gb|ELN60926.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435182345|gb|ELN67366.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435184697|gb|ELN69620.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435189975|gb|ELN74588.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435195315|gb|ELN79718.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435202743|gb|ELN86568.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435210788|gb|ELN94023.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435213598|gb|ELN96482.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435218297|gb|ELO00699.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435222718|gb|ELO04810.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435232237|gb|ELO13344.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435237426|gb|ELO18117.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435237591|gb|ELO18258.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435243073|gb|ELO23372.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435247486|gb|ELO27418.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435259127|gb|ELO38359.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435259413|gb|ELO38637.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435263321|gb|ELO42387.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435266467|gb|ELO45224.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435271920|gb|ELO50356.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435278938|gb|ELO56762.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435281276|gb|ELO58952.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435291250|gb|ELO68114.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435294124|gb|ELO70773.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435299156|gb|ELO75327.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435310211|gb|ELO84742.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435320315|gb|ELO92975.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435326367|gb|ELO98195.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435333010|gb|ELP03897.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435334974|gb|ELP05352.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|444844171|gb|ELX69415.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444846976|gb|ELX72128.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444863186|gb|ELX88014.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444865764|gb|ELX90527.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444869430|gb|ELX94013.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444877338|gb|ELY01489.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444880621|gb|ELY04689.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444882603|gb|ELY06544.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444890583|gb|ELY13903.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 928
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|167551523|ref|ZP_02345278.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205323683|gb|EDZ11522.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
Length = 928
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|161505500|ref|YP_001572612.1| DNA polymerase I [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|160866847|gb|ABX23470.1| hypothetical protein SARI_03661 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 928
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|365847528|ref|ZP_09388015.1| DNA-directed DNA polymerase [Yokenella regensburgei ATCC 43003]
gi|364572307|gb|EHM49862.1| DNA-directed DNA polymerase [Yokenella regensburgei ATCC 43003]
Length = 928
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEDYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLMAVSGVEAD 115
>gi|119503603|ref|ZP_01625686.1| DNA polymerase I [marine gamma proteobacterium HTCC2080]
gi|119460665|gb|EAW41757.1| DNA polymerase I [marine gamma proteobacterium HTCC2080]
Length = 909
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP P+ + + ++ + A I+AM + ++ V+ + D
Sbjct: 57 VFDAKGPTFRNEIYAEYKANRPPMPEELREQIEPIHAMIRAMGLPLVCVSGVEAD 111
>gi|53728836|ref|ZP_00134878.2| COG0749: DNA polymerase I - 3'-5' exonuclease and polymerase
domains [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|126207957|ref|YP_001053182.1| DNA polymerase I [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|126096749|gb|ABN73577.1| DNA polymerase I (POL I) [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 957
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRGELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEAD 115
>gi|399114740|emb|CCG17535.1| DNA polymerase I [Taylorella equigenitalis 14/56]
Length = 908
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FRH LY YK++RPP PD + ++ + +I+A+ +I
Sbjct: 57 VFDAPGRTFRHELYTEYKSHRPPMPDDMRTQIEPIHQAIEALGWTII 103
>gi|397662061|ref|YP_006502761.1| DNA polymerase I [Taylorella equigenitalis ATCC 35865]
gi|394350240|gb|AFN36154.1| DNA polymerase I [Taylorella equigenitalis ATCC 35865]
Length = 908
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FRH LY YK++RPP PD + ++ + +I+A+ +I
Sbjct: 57 VFDAPGRTFRHELYTEYKSHRPPMPDDMRTQIEPIHQAIEALGWTII 103
>gi|387770848|ref|ZP_10127021.1| DNA-directed DNA polymerase [Pasteurella bettyae CCUG 2042]
gi|386903269|gb|EIJ68085.1| DNA-directed DNA polymerase [Pasteurella bettyae CCUG 2042]
Length = 956
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + + +Q L IKA+ I ++ + + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDELRKQIQPLHHMIKALGIPLLSIEGVEAD 115
>gi|319778281|ref|YP_004129194.1| DNA polymerase I [Taylorella equigenitalis MCE9]
gi|317108305|gb|ADU91051.1| DNA polymerase I [Taylorella equigenitalis MCE9]
Length = 908
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FRH LY YK++RPP PD + ++ + +I+A+ +I
Sbjct: 57 VFDAPGRTFRHELYTEYKSHRPPMPDDMRTQIEPIHQAIEALGWTII 103
>gi|285016940|ref|YP_003374651.1| DNA polymeraseIprotein [Xanthomonas albilineans GPE PC73]
gi|283472158|emb|CBA14665.1| probable dna polymeraseIprotein [Xanthomonas albilineans GPE PC73]
Length = 922
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
A G FR LYP YK NRPP PD + ++ + + A+ I ++ E V +D G
Sbjct: 58 APGKTFRDALYPQYKANRPPMPDELRAQVEPMCQIVHALGITILRESGVEADDVIG 113
>gi|445140764|ref|ZP_21385073.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444852043|gb|ELX77126.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
Length = 928
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|437821830|ref|ZP_20843409.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435306761|gb|ELO82004.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
Length = 928
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|16767264|ref|NP_462879.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56415846|ref|YP_152921.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62182461|ref|YP_218878.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161617122|ref|YP_001591087.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|168244255|ref|ZP_02669187.1| DNA polymerase I family protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194444061|ref|YP_002043223.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194448474|ref|YP_002048004.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197364776|ref|YP_002144413.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|224585810|ref|YP_002639609.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|374979492|ref|ZP_09720827.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|375116809|ref|ZP_09761979.1| putative acyltransferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|378447337|ref|YP_005234969.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378452903|ref|YP_005240263.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378701859|ref|YP_005183817.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378986684|ref|YP_005249840.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378991281|ref|YP_005254445.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379703242|ref|YP_005244970.1| putative xanthine/uracil permeases family protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|383498601|ref|YP_005399290.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386589358|ref|YP_006085758.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|418807167|ref|ZP_13362731.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418811329|ref|ZP_13366860.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418818564|ref|ZP_13374034.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418821527|ref|ZP_13376951.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418827433|ref|ZP_13382581.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|418831377|ref|ZP_13386331.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418838369|ref|ZP_13393217.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418840885|ref|ZP_13395710.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418849367|ref|ZP_13404099.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418854754|ref|ZP_13409419.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418861287|ref|ZP_13415851.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418865840|ref|ZP_13420310.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|418870447|ref|ZP_13424864.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419728715|ref|ZP_14255679.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419733490|ref|ZP_14260387.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419743169|ref|ZP_14269835.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419749259|ref|ZP_14275743.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421569881|ref|ZP_16015579.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421575614|ref|ZP_16021226.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421578860|ref|ZP_16024432.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421583567|ref|ZP_16029088.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|422028236|ref|ZP_16374548.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422033287|ref|ZP_16379365.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427556588|ref|ZP_18929871.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427574509|ref|ZP_18934462.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427595813|ref|ZP_18939377.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427620388|ref|ZP_18944258.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427644110|ref|ZP_18949146.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427658256|ref|ZP_18953870.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427663513|ref|ZP_18958772.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427680610|ref|ZP_18963663.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427801576|ref|ZP_18969121.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|20141441|sp|Q9F173.2|DPO1_SALTY RecName: Full=DNA polymerase I; Short=POL I
gi|16422560|gb|AAL22838.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56130103|gb|AAV79609.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62130094|gb|AAX67797.1| DNA polymerase I, 3' --> 5' polymerase, 5' --> 3' and 3' --> 5'
exonuclease [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161366486|gb|ABX70254.1| hypothetical protein SPAB_04960 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402724|gb|ACF62946.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194406778|gb|ACF66997.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197096253|emb|CAR61851.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|205336940|gb|EDZ23704.1| DNA polymerase I family protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|224470338|gb|ACN48168.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261249116|emb|CBG26977.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267996282|gb|ACY91167.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160508|emb|CBW20038.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312915113|dbj|BAJ39087.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321225284|gb|EFX50342.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322716955|gb|EFZ08526.1| putative acyltransferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323132341|gb|ADX19771.1| putative xanthine/uracil permeases family protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|332990828|gb|AEF09811.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|380465422|gb|AFD60825.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|381298836|gb|EIC39911.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381299931|gb|EIC40998.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381311661|gb|EIC52473.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|381312256|gb|EIC53060.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|383796402|gb|AFH43484.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|392779092|gb|EJA35762.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392780155|gb|EJA36811.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392784747|gb|EJA41329.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392790103|gb|EJA46604.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392796405|gb|EJA52742.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392799476|gb|EJA55733.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392799730|gb|EJA55983.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392810025|gb|EJA66052.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392821214|gb|EJA77041.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392823291|gb|EJA79088.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392824930|gb|EJA80693.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392826915|gb|EJA82634.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392830535|gb|EJA86183.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|402522064|gb|EJW29395.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402523802|gb|EJW31113.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402526161|gb|EJW33439.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402532057|gb|EJW39257.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414011985|gb|EKS95918.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414013209|gb|EKS97096.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414013456|gb|EKS97341.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414027139|gb|EKT10383.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414028032|gb|EKT11233.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414030485|gb|EKT13583.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414041506|gb|EKT24076.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414041873|gb|EKT24425.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414046653|gb|EKT28970.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414055423|gb|EKT37316.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414061619|gb|EKT43007.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
Length = 928
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|418845772|ref|ZP_13400552.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392812385|gb|EJA68375.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
Length = 928
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|421885454|ref|ZP_16316650.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|379985061|emb|CCF88923.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
Length = 928
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|418514098|ref|ZP_13080312.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|366080171|gb|EHN44145.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
Length = 928
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|340001439|ref|YP_004732323.1| DNA polymerase I [Salmonella bongori NCTC 12419]
gi|339514801|emb|CCC32571.1| DNA polymerase I [Salmonella bongori NCTC 12419]
Length = 928
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|197263783|ref|ZP_03163857.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197242038|gb|EDY24658.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
Length = 928
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|168237613|ref|ZP_02662671.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194736970|ref|YP_002116921.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|204930172|ref|ZP_03221149.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|416505717|ref|ZP_11734092.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416517832|ref|ZP_11739630.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416529100|ref|ZP_11744127.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416537560|ref|ZP_11749000.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416548395|ref|ZP_11754789.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416560544|ref|ZP_11761263.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|452122227|ref|YP_007472475.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|194712472|gb|ACF91693.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197289392|gb|EDY28757.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|204320576|gb|EDZ05778.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|363552795|gb|EHL37074.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363555982|gb|EHL40202.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363559635|gb|EHL43792.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363563259|gb|EHL47338.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363570982|gb|EHL54900.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363574649|gb|EHL58512.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|451911231|gb|AGF83037.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 928
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|197247609|ref|YP_002148920.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|440763596|ref|ZP_20942634.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|440766212|ref|ZP_20945209.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|440771510|ref|ZP_20950425.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|197211312|gb|ACH48709.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|436419382|gb|ELP17259.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|436421085|gb|ELP18935.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|436423291|gb|ELP21105.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
Length = 928
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|168232922|ref|ZP_02657980.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168821669|ref|ZP_02833669.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194469064|ref|ZP_03075048.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|409247671|ref|YP_006888366.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|194455428|gb|EDX44267.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205332830|gb|EDZ19594.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205341832|gb|EDZ28596.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320088405|emb|CBY98164.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 928
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|429118496|ref|ZP_19179259.1| DNA polymerase I [Cronobacter sakazakii 680]
gi|426327042|emb|CCK09996.1| DNA polymerase I [Cronobacter sakazakii 680]
Length = 927
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|397162768|ref|ZP_10486235.1| DNA polymerase I [Enterobacter radicincitans DSM 16656]
gi|396095533|gb|EJI93076.1| DNA polymerase I [Enterobacter radicincitans DSM 16656]
Length = 928
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|418787067|ref|ZP_13342872.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418793575|ref|ZP_13349302.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418800307|ref|ZP_13355969.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392761647|gb|EJA18467.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392764069|gb|EJA20873.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392767239|gb|EJA24010.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
Length = 928
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|416573300|ref|ZP_11767787.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|363572000|gb|EHL55896.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
Length = 928
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417361820|ref|ZP_12135623.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353583009|gb|EHC43496.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
Length = 536
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417353881|ref|ZP_12130465.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417471096|ref|ZP_12167145.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353563307|gb|EHC29696.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353623660|gb|EHC72886.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
Length = 535
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|296105444|ref|YP_003615590.1| DNA polymerase I [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295059903|gb|ADF64641.1| DNA polymerase I [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 930
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|237727972|ref|ZP_04558453.1| DNA polymerase I [Citrobacter sp. 30_2]
gi|226910229|gb|EEH96147.1| DNA polymerase I [Citrobacter sp. 30_2]
Length = 928
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|168263110|ref|ZP_02685083.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|205348113|gb|EDZ34744.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
Length = 928
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|157147357|ref|YP_001454676.1| DNA polymerase I [Citrobacter koseri ATCC BAA-895]
gi|157084562|gb|ABV14240.1| hypothetical protein CKO_03151 [Citrobacter koseri ATCC BAA-895]
Length = 928
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|421846757|ref|ZP_16279902.1| DNA polymerase I [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411771849|gb|EKS55504.1| DNA polymerase I [Citrobacter freundii ATCC 8090 = MTCC 1658]
Length = 928
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|401677321|ref|ZP_10809298.1| PolA Protein [Enterobacter sp. SST3]
gi|400215512|gb|EJO46421.1| PolA Protein [Enterobacter sp. SST3]
Length = 930
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|365101197|ref|ZP_09331904.1| DNA polymerase I [Citrobacter freundii 4_7_47CFAA]
gi|363647644|gb|EHL86858.1| DNA polymerase I [Citrobacter freundii 4_7_47CFAA]
Length = 928
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417514747|ref|ZP_12178470.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353632934|gb|EHC79874.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
Length = 535
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417791948|ref|ZP_12439361.1| DNA polymerase I [Cronobacter sakazakii E899]
gi|449310239|ref|YP_007442595.1| DNA polymerase I [Cronobacter sakazakii SP291]
gi|333953933|gb|EGL71822.1| DNA polymerase I [Cronobacter sakazakii E899]
gi|449100272|gb|AGE88306.1| DNA polymerase I [Cronobacter sakazakii SP291]
Length = 927
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|156936143|ref|YP_001440059.1| DNA polymerase I [Cronobacter sakazakii ATCC BAA-894]
gi|389839021|ref|YP_006341105.1| DNA polymerase I [Cronobacter sakazakii ES15]
gi|156534397|gb|ABU79223.1| hypothetical protein ESA_04040 [Cronobacter sakazakii ATCC BAA-894]
gi|387849497|gb|AFJ97594.1| DNA polymerase I [Cronobacter sakazakii ES15]
Length = 927
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|455641165|gb|EMF20362.1| DNA polymerase I [Citrobacter freundii GTC 09479]
Length = 928
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|424801716|ref|ZP_18227258.1| DNA polymerase I [Cronobacter sakazakii 696]
gi|423237437|emb|CCK09128.1| DNA polymerase I [Cronobacter sakazakii 696]
Length = 927
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|395230167|ref|ZP_10408473.1| DNA polymerase I [Citrobacter sp. A1]
gi|424730867|ref|ZP_18159459.1| dna polymerase i [Citrobacter sp. L17]
gi|394716097|gb|EJF21866.1| DNA polymerase I [Citrobacter sp. A1]
gi|422894580|gb|EKU34389.1| dna polymerase i [Citrobacter sp. L17]
Length = 928
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|283834618|ref|ZP_06354359.1| hypothetical protein CIT292_08818 [Citrobacter youngae ATCC 29220]
gi|291069528|gb|EFE07637.1| DNA polymerase I [Citrobacter youngae ATCC 29220]
Length = 928
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|260599983|ref|YP_003212554.1| DNA polymerase I [Cronobacter turicensis z3032]
gi|260219160|emb|CBA34515.1| DNA polymerase I [Cronobacter turicensis z3032]
Length = 966
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 100 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 154
>gi|220936133|ref|YP_002515032.1| 5'-3' exonuclease [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219997443|gb|ACL74045.1| 5'-3' exonuclease [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 332
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAM 74
G ++RH +YP YK NRPP P+++ + + +A + A+
Sbjct: 69 GQSYRHEIYPEYKANRPPAPESLKRQFRQCRALVTAL 105
>gi|146313733|ref|YP_001178807.1| DNA polymerase I [Enterobacter sp. 638]
gi|145320609|gb|ABP62756.1| DNA polymerase I [Enterobacter sp. 638]
Length = 930
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417387060|ref|ZP_12151594.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353601507|gb|EHC57124.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
Length = 527
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417369471|ref|ZP_12140652.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353584182|gb|EHC44363.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
Length = 527
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|429094099|ref|ZP_19156653.1| DNA polymerase I [Cronobacter dublinensis 1210]
gi|426740898|emb|CCJ82766.1| DNA polymerase I [Cronobacter dublinensis 1210]
Length = 927
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|429102476|ref|ZP_19164450.1| DNA polymerase I [Cronobacter turicensis 564]
gi|426289125|emb|CCJ90563.1| DNA polymerase I [Cronobacter turicensis 564]
Length = 927
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|401765845|ref|YP_006580852.1| DNA polymerase I [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400177379|gb|AFP72228.1| DNA polymerase I [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 930
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|420368052|ref|ZP_14868826.1| DNA polymerase I [Shigella flexneri 1235-66]
gi|391322733|gb|EIQ79407.1| DNA polymerase I [Shigella flexneri 1235-66]
Length = 928
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|419741491|ref|ZP_14268182.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381291376|gb|EIC32621.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
Length = 886
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417535194|ref|ZP_12188753.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|353657251|gb|EHC97754.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
Length = 535
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|344337497|ref|ZP_08768431.1| DNA polymerase I [Thiocapsa marina 5811]
gi|343802450|gb|EGV20390.1| DNA polymerase I [Thiocapsa marina 5811]
Length = 905
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR +YP YK NRP PD + + + L+ I+AM + ++ V +V +D G
Sbjct: 59 VFDAPGKTFRDDIYPEYKANRPAMPDELREQILPLQEVIRAMGLPLLVVPDVEADDVIG 117
>gi|114769975|ref|ZP_01447585.1| DNA polymerase I [Rhodobacterales bacterium HTCC2255]
gi|114549680|gb|EAU52562.1| DNA polymerase I [alpha proteobacterium HTCC2255]
Length = 932
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 15 YNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAM 74
+ I D +D + ++ A G FR +YP YK NRPP P+ ++ + + +A
Sbjct: 48 FKIIEDQKGSDAPTHLVVVFDAKGKTFRSDIYPEYKMNRPPAPEDLIPQFPLTRDATRAF 107
Query: 75 SIKVIE 80
+ IE
Sbjct: 108 GLACIE 113
>gi|365972782|ref|YP_004954343.1| DNA polymerase I [Enterobacter cloacae EcWSU1]
gi|365751695|gb|AEW75922.1| DNA polymerase I [Enterobacter cloacae EcWSU1]
Length = 944
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 75 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 129
>gi|119470389|ref|ZP_01613117.1| multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal);
3'->5' polymerase; 3'->5' exonuclease (C-terminal)
[Alteromonadales bacterium TW-7]
gi|119446314|gb|EAW27590.1| multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal);
3'->5' polymerase; 3'->5' exonuclease (C-terminal)
[Alteromonadales bacterium TW-7]
Length = 911
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + + + IKAM +I + + D
Sbjct: 61 VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEAD 115
>gi|417437255|ref|ZP_12161758.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353613056|gb|EHC65251.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
Length = 535
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|392539918|ref|ZP_10287055.1| DNA polymerase I [Pseudoalteromonas marina mano4]
Length = 911
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + + + IKAM +I + + D
Sbjct: 61 VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEAD 115
>gi|359451863|ref|ZP_09241241.1| DNA polymerase I [Pseudoalteromonas sp. BSi20480]
gi|358042321|dbj|GAA77490.1| DNA polymerase I [Pseudoalteromonas sp. BSi20480]
Length = 911
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + + + IKAM +I + + D
Sbjct: 61 VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEAD 115
>gi|417345051|ref|ZP_12125266.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|357953429|gb|EHJ79973.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
Length = 527
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417542920|ref|ZP_12194240.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353657735|gb|EHC98100.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
Length = 536
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417490155|ref|ZP_12172924.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|353631151|gb|EHC78522.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
Length = 532
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|417394574|ref|ZP_12156712.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353605095|gb|EHC59700.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
Length = 535
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|437932817|ref|ZP_20851210.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|435311173|gb|ELO85443.1| DNA polymerase I, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
Length = 254
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|320352875|ref|YP_004194214.1| DNA polymerase I [Desulfobulbus propionicus DSM 2032]
gi|320121377|gb|ADW16923.1| DNA polymerase I [Desulfobulbus propionicus DSM 2032]
Length = 894
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
G FRH LY YK NRPP P+ ++ + Y++ + A I +N+ +ED
Sbjct: 63 GPVFRHRLYGQYKANRPPMPEDLIPQIPYIRKMVAAYRI----LNLEHED 108
>gi|82701702|ref|YP_411268.1| DNA polymerase I [Nitrosospira multiformis ATCC 25196]
gi|82409767|gb|ABB73876.1| DNA polymerase I [Nitrosospira multiformis ATCC 25196]
Length = 905
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 19 HDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKV 78
H Y D + V D A G FR LY YK NRPP PD + + L I AM +
Sbjct: 45 HKDYQADYSACVFD---AKGKTFRDELYAEYKANRPPMPDELAAQIAPLLECINAMGWPM 101
Query: 79 IEVNVMYED 87
+ V + D
Sbjct: 102 LSVEGVEAD 110
>gi|378947978|ref|YP_005205466.1| protein PolA [Pseudomonas fluorescens F113]
gi|359757992|gb|AEV60071.1| PolA [Pseudomonas fluorescens F113]
Length = 922
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR LY YK NRP PD + ++ L AS+KA+ ++ V NV +D G
Sbjct: 58 VFDAKGGTFRDELYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIG 116
>gi|90019722|ref|YP_525549.1| DNA polymerase I [Saccharophagus degradans 2-40]
gi|89949322|gb|ABD79337.1| DNA polymerase I [Saccharophagus degradans 2-40]
Length = 926
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FR +Y YK NRPP PD + ++ L I+AM + +I+ V +D G
Sbjct: 60 IFDAKGKTFRDDIYSDYKANRPPMPDDLRAQIEPLHTIIRAMGLPLIIQDGVEADDVIG 118
>gi|225630667|ref|YP_002727458.1| DNA polymerase I [Wolbachia sp. wRi]
gi|225592648|gb|ACN95667.1| DNA polymerase I [Wolbachia sp. wRi]
Length = 858
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 1 MGESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
+G YG L L Y I H Y+T I LD A NFRH LYP YK NR P+ +
Sbjct: 33 IGGVYGFL-NMVLKY-IAHSDYLT-IALD------AGKKNFRHDLYPEYKANRVTPPEDL 83
Query: 61 VQGLQYLKASIKAMSIKVIEV 81
L+ +++A ++ E+
Sbjct: 84 TPQFTILREAVEAFNLSYEEI 104
>gi|213421486|ref|ZP_03354552.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 123
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAIVKAMGLPLLAVSGVEAD 115
>gi|17546949|ref|NP_520351.1| DNA polymerase I [Ralstonia solanacearum GMI1000]
gi|17429250|emb|CAD15937.1| probable dna polymeraseIprotein [Ralstonia solanacearum GMI1000]
Length = 946
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +R P PD + Q ++ + +++A+ ++ V+ + D
Sbjct: 58 YSACVFDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILMVDGVEAD 116
>gi|429058191|ref|ZP_19122432.1| DNA polymerase I, partial [Escherichia coli 97.1742]
gi|427307730|gb|EKW70162.1| DNA polymerase I, partial [Escherichia coli 97.1742]
Length = 268
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|299066168|emb|CBJ37351.1| DNA polymerase I (POL I) [Ralstonia solanacearum CMR15]
Length = 959
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +R P PD + Q ++ + +++A+ ++ V+ + D
Sbjct: 72 YSACVFDAKGKTFRDDLYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILMVDGVEAD 130
>gi|99035969|ref|ZP_01315013.1| hypothetical protein Wendoof_01000149 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 529
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 1 MGESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
+G YG L L Y I H Y+T I LD A NFRH LYP YK NR P+ +
Sbjct: 33 IGGVYGFL-NMVLKY-IAHSDYLT-IALD------AGKKNFRHNLYPEYKANRVTPPEDL 83
Query: 61 VQGLQYLKASIKAMSIKVIEV 81
L+ +++A ++ E+
Sbjct: 84 TPQFTILREAVEAFNLSYEEI 104
>gi|325267196|ref|ZP_08133863.1| DNA-directed DNA polymerase I, partial [Kingella denitrificans ATCC
33394]
gi|324981359|gb|EGC17004.1| DNA-directed DNA polymerase I [Kingella denitrificans ATCC 33394]
Length = 984
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G NFRH L+ YK RPP PD + L ++ M KV++V V +D G
Sbjct: 118 VFDAKGKNFRHELFEDYKATRPPMPDDLRPQADMLPELVELMGWKVLKVPQVEADDVIG 176
>gi|325265069|ref|ZP_08131796.1| DNA polymerase I [Clostridium sp. D5]
gi|324029759|gb|EGB91047.1| DNA polymerase I [Clostridium sp. D5]
Length = 871
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 5 YGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGL 64
YG L F + Y+T +T DVH FRH +Y YK R P + + Q +
Sbjct: 36 YGFLNIMFKILDEEKPEYLT-VTFDVH------APTFRHEMYADYKGTRKPMAEELRQQV 88
Query: 65 QYLKASIKAMSIKVIE 80
+K ++AM+I++IE
Sbjct: 89 PVIKEVLQAMNIEIIE 104
>gi|57233870|ref|YP_182100.1| DNA-directed DNA polymerase I [Dehalococcoides ethenogenes 195]
gi|57224318|gb|AAW39375.1| DNA-directed DNA polymerase I [Dehalococcoides ethenogenes 195]
Length = 903
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 2 GESYGLLWRGFLSYNIRHDTYMTDITLDVHDL-YGACGMNFRHTLYPSYKNNRPPTPDTI 60
GE G + GF S I+ +TD+ D + + + G FRH ++ +YK RPP PD +
Sbjct: 31 GEVVGAAF-GFASILIK---VLTDLKPDCYAISFDRKGPTFRHEMFKAYKAQRPPMPDEL 86
Query: 61 VQGLQYLKASIKAMSIKVIE 80
V L ++ + A ++ V E
Sbjct: 87 VSQLGRVRQIVDAFNMPVYE 106
>gi|270308554|ref|YP_003330612.1| DNA-directed DNA polymerase I [Dehalococcoides sp. VS]
gi|270154446|gb|ACZ62284.1| DNA-directed DNA polymerase I [Dehalococcoides sp. VS]
Length = 903
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 2 GESYGLLWRGFLSYNIRHDTYMTDITLDVHDL-YGACGMNFRHTLYPSYKNNRPPTPDTI 60
GE G + GF S I+ +TD+ D + + + G FRH ++ +YK RPP PD +
Sbjct: 31 GEVVGAAF-GFASILIK---VLTDLKPDCYAISFDRKGPTFRHEMFKAYKAQRPPMPDEL 86
Query: 61 VQGLQYLKASIKAMSIKVIE 80
V L ++ + A ++ V E
Sbjct: 87 VSQLGRVRQIVDAFNMPVYE 106
>gi|407715462|ref|YP_006836742.1| DNA polymerase I [Cycloclasticus sp. P1]
gi|407255798|gb|AFT66239.1| DNA polymerase I [Cycloclasticus sp. P1]
Length = 905
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FR+ +YP YK NR PD + + ++ L IKAM + V+E V +D G
Sbjct: 58 IFDAPGKTFRNDMYPEYKANRASMPDELREQIKPLHQLIKAMGLPLVMEPGVEADDVIG 116
>gi|392427331|ref|YP_006468325.1| 5'-3' exonuclease (including N-terminal domain of PolI)
[Desulfosporosinus acidiphilus SJ4]
gi|391357294|gb|AFM42993.1| 5'-3' exonuclease (including N-terminal domain of PolI)
[Desulfosporosinus acidiphilus SJ4]
Length = 273
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G+ FRH LYP YK R P P +++ + K +++ ++I I VN
Sbjct: 59 GVTFRHKLYPDYKATRKPAPAELIEQIPRAKKALENLNIPQIAVN 103
>gi|16762432|ref|NP_458049.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|29143920|ref|NP_807262.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|213425460|ref|ZP_03358210.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|289829363|ref|ZP_06546975.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Typhi
str. E98-3139]
gi|378961778|ref|YP_005219264.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Typhi
str. P-stx-12]
gi|25288536|pir||AH0950 DNA polymerase I [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16504737|emb|CAD03100.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29139556|gb|AAO71122.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|374355650|gb|AEZ47411.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Typhi
str. P-stx-12]
Length = 928
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAIVKAMGLPLLAVSGVEAD 115
>gi|153853271|ref|ZP_01994680.1| hypothetical protein DORLON_00665 [Dorea longicatena DSM 13814]
gi|149754057|gb|EDM63988.1| DNA-directed DNA polymerase [Dorea longicatena DSM 13814]
Length = 871
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 5 YGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGL 64
YG L F Y+T + DVH FRH +Y YK R P D + Q +
Sbjct: 36 YGFLTIMFKLLEEEKPEYLT-VAFDVH------APTFRHKMYAEYKGTRKPMADELRQQV 88
Query: 65 QYLKASIKAMSIKVIE 80
+K ++AM +K IE
Sbjct: 89 PVIKEVLRAMRVKTIE 104
>gi|344171961|emb|CCA84587.1| DNA polymerase I (POL I) [Ralstonia syzygii R24]
Length = 944
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +R P PD + Q ++ + +++A+ ++ V+ + D
Sbjct: 56 YSACVFDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILVVDGVEAD 114
>gi|344167306|emb|CCA79516.1| DNA polymerase I (POL I) [blood disease bacterium R229]
Length = 944
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +R P PD + Q ++ + +++A+ ++ V+ + D
Sbjct: 56 YSACVFDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILVVDGVEAD 114
>gi|308272139|emb|CBX28746.1| DNA polymerase I [uncultured Desulfobacterium sp.]
Length = 912
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FRH ++ YK RPP P+ + + ++K KA ++ VIE+
Sbjct: 79 VFDAKGPTFRHDIFKDYKATRPPMPEDLQVQIPFIKEITKAFNLPVIEI 127
>gi|300690852|ref|YP_003751847.1| DNA polymerase I (POL I) [Ralstonia solanacearum PSI07]
gi|299077912|emb|CBJ50551.1| DNA polymerase I (POL I) [Ralstonia solanacearum PSI07]
Length = 944
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +R P PD + Q ++ + +++A+ ++ V+ + D
Sbjct: 56 YSACVFDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILVVDGVEAD 114
>gi|291556803|emb|CBL33920.1| DNA polymerase I [Eubacterium siraeum V10Sc8a]
Length = 829
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
FRH +Y YK NR P+ + Q L Y+K I AM I +IE
Sbjct: 63 FRHKMYDGYKANRKGMPEDLAQQLPYMKKIITAMGITIIE 102
>gi|289522409|ref|ZP_06439263.1| DNA polymerase I [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289504245|gb|EFD25409.1| DNA polymerase I [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 856
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
+ A G FRH Y YK RPPTP+ L +K +K + VIE+ + D
Sbjct: 58 FFDAKGETFRHEAYKEYKEGRPPTPEEFKSQLLLIKEIMKYLGYPVIEIEGVEAD 112
>gi|291531643|emb|CBK97228.1| DNA polymerase I [Eubacterium siraeum 70/3]
Length = 829
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 40 NFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
FRH +Y YK NR P+ + Q L Y+K I AM I +IE
Sbjct: 62 TFRHKMYDGYKANRKGMPEDLAQQLPYMKKIITAMGITIIE 102
>gi|213610185|ref|ZP_03370011.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
Length = 870
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAIVKAMGLPLLAVSGVEAD 115
>gi|423132365|ref|ZP_17120015.1| DNA polymerase I [Myroides odoratimimus CCUG 12901]
gi|371639436|gb|EHO05052.1| DNA polymerase I [Myroides odoratimimus CCUG 12901]
Length = 939
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G + R L+P YK NR TP+ I + Y+K ++AM I ++EV+
Sbjct: 66 GSDLRLELFPEYKANRDETPEAIKIAIPYIKQILEAMHIPIVEVS 110
>gi|429088783|ref|ZP_19151515.1| DNA polymerase I [Cronobacter universalis NCTC 9529]
gi|426508586|emb|CCK16627.1| DNA polymerase I [Cronobacter universalis NCTC 9529]
Length = 964
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 98 VFDAKGKTFRDELFEHYKSHRPPMPDDLRGQIEPLHAMVKAMGLPLLAVSGVEAD 152
>gi|422778619|ref|ZP_16832266.1| DNA polymerase I, partial [Escherichia coli H120]
gi|323943783|gb|EGB39879.1| DNA polymerase I [Escherichia coli H120]
Length = 71
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V
Sbjct: 23 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAV 71
>gi|289811950|ref|ZP_06542579.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
Length = 172
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN-VMYEDAYG 90
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ V +D G
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAIVKAMGLPLLAVSGVEADDVIG 119
>gi|399154619|ref|ZP_10754686.1| DNA polymerase I [gamma proteobacterium SCGC AAA007-O20]
Length = 911
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ + G NFRH +YP YK NR P ++++ ++ L I+AM I
Sbjct: 59 IFDSKGSNFRHQIYPQYKANRKPADESLIVQIEPLYQIIRAMGFHFI 105
>gi|421891276|ref|ZP_16322087.1| DNA polymerase I (POL I) [Ralstonia solanacearum K60-1]
gi|378963385|emb|CCF98835.1| DNA polymerase I (POL I) [Ralstonia solanacearum K60-1]
Length = 944
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +R P PD + Q ++ + +++A+ ++ V+ + D
Sbjct: 56 YSACVFDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILVVDGVEAD 114
>gi|374621146|ref|ZP_09693680.1| DNA polymerase I [gamma proteobacterium HIMB55]
gi|374304373|gb|EHQ58557.1| DNA polymerase I [gamma proteobacterium HIMB55]
Length = 910
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP P+ + + ++ + I+AM + +I ++ + D
Sbjct: 59 IFDAKGPTFRNEIYSEYKANRPPMPEELREQIEPIHNVIRAMGLPLISISGVEAD 113
>gi|416174680|ref|ZP_11609272.1| DNA polymerase I [Neisseria meningitidis OX99.30304]
gi|325129412|gb|EGC52244.1| DNA polymerase I [Neisseria meningitidis OX99.30304]
Length = 937
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTI 60
VHD ++ A G NFRH ++P YK RPP PD +
Sbjct: 52 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDL 86
>gi|385329229|ref|YP_005883532.1| DNA polymerase I [Neisseria meningitidis alpha710]
gi|385341173|ref|YP_005895044.1| DNA polymerase I [Neisseria meningitidis M01-240149]
gi|385856471|ref|YP_005902983.1| DNA polymerase I [Neisseria meningitidis NZ-05/33]
gi|416189242|ref|ZP_11615204.1| DNA polymerase I [Neisseria meningitidis M0579]
gi|308390081|gb|ADO32401.1| DNA polymerase I [Neisseria meningitidis alpha710]
gi|325135575|gb|EGC58193.1| DNA polymerase I [Neisseria meningitidis M0579]
gi|325201379|gb|ADY96833.1| DNA polymerase I [Neisseria meningitidis M01-240149]
gi|325207360|gb|ADZ02812.1| DNA polymerase I [Neisseria meningitidis NZ-05/33]
Length = 929
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTI 60
VHD ++ A G NFRH ++P YK RPP PD +
Sbjct: 52 VHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDL 86
>gi|289207231|ref|YP_003459297.1| DNA polymerase I [Thioalkalivibrio sp. K90mix]
gi|288942862|gb|ADC70561.1| DNA polymerase I [Thioalkalivibrio sp. K90mix]
Length = 911
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +YP YK RPP PD + ++ L ++AM + ++ V + D
Sbjct: 69 VFDAKGKTFRDDIYPEYKATRPPMPDELAAQIEPLHELVRAMGLPLLCVEGVEAD 123
>gi|307150628|ref|YP_003886012.1| DNA polymerase I [Cyanothece sp. PCC 7822]
gi|306980856|gb|ADN12737.1| DNA polymerase I [Cyanothece sp. PCC 7822]
Length = 966
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 40 NFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
+FRH LYP+YK +R TP+ + L+ LK + A++++++ V
Sbjct: 73 SFRHLLYPNYKGDRKETPEEFIPDLENLKRLLNALNLQMVTV 114
>gi|452749422|ref|ZP_21949184.1| DNA polymerase I [Pseudomonas stutzeri NF13]
gi|452006648|gb|EMD98918.1| DNA polymerase I [Pseudomonas stutzeri NF13]
Length = 914
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + ++ L AS++A+ + ++ V+ + D
Sbjct: 58 VFDAKGPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVDGVEAD 112
>gi|432374190|ref|ZP_19617221.1| DNA polymerase I [Escherichia coli KTE11]
gi|430893612|gb|ELC15936.1| DNA polymerase I [Escherichia coli KTE11]
Length = 928
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRVQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|366158352|ref|ZP_09458214.1| DNA polymerase I [Escherichia sp. TW09308]
Length = 928
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRVQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|307105571|gb|EFN53820.1| hypothetical protein CHLNCDRAFT_136540 [Chlorella variabilis]
Length = 293
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
A G FRH +Y YK R PD + + + L +KAM+I VI+V+ + D
Sbjct: 43 ARGKTFRHEMYEGYKGQRQACPDAVKEAIPRLLQLLKAMAIPVIQVSGVEAD 94
>gi|421897737|ref|ZP_16328104.1| dna polymeraseIprotein [Ralstonia solanacearum MolK2]
gi|206588943|emb|CAQ35905.1| dna polymeraseIprotein [Ralstonia solanacearum MolK2]
Length = 944
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +R P PD + Q ++ + +++A+ ++ V+ + D
Sbjct: 56 YSACVFDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILVVDGVEAD 114
>gi|88858644|ref|ZP_01133285.1| multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal);
3'->5' polymerase; 3'->5' exonuclease (C-terminal)
[Pseudoalteromonas tunicata D2]
gi|88818870|gb|EAR28684.1| multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal);
3'->5' polymerase; 3'->5' exonuclease (C-terminal)
[Pseudoalteromonas tunicata D2]
Length = 916
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + L I+AM + +I + + D
Sbjct: 61 IFDAKGKTFRNDMYAEYKANRPPMPDELRGQIAPLHDIIRAMGLPLISIEGVEAD 115
>gi|58616765|ref|YP_195964.1| DNA polymerase I [Ehrlichia ruminantium str. Gardel]
gi|58416377|emb|CAI27490.1| DNA polymerase I (POL I) [Ehrlichia ruminantium str. Gardel]
Length = 860
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G NFRH +YP YK+NR P+ ++ L+ ++ A++I EV
Sbjct: 61 GKNFRHDIYPQYKSNRIKLPEDLISQFPLLREAVNALNISYEEV 104
>gi|386332868|ref|YP_006029037.1| dna polymeraseIprotein [Ralstonia solanacearum Po82]
gi|334195316|gb|AEG68501.1| dna polymeraseIprotein [Ralstonia solanacearum Po82]
Length = 944
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +R P PD + Q ++ + +++A+ ++ V+ + D
Sbjct: 56 YSACVFDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILVVDGVEAD 114
>gi|86747974|ref|YP_484470.1| DNA polymerase I [Rhodopseudomonas palustris HaA2]
gi|86571002|gb|ABD05559.1| DNA polymerase I [Rhodopseudomonas palustris HaA2]
Length = 1032
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
FR+ LYP YK +RPP PD ++ ++ +++A + +E
Sbjct: 96 FRNQLYPDYKAHRPPAPDDLIPQFALIREAVRAFDLPCLE 135
>gi|53803295|ref|YP_114980.1| DNA polymerase I [Methylococcus capsulatus str. Bath]
gi|53757056|gb|AAU91347.1| DNA polymerase I [Methylococcus capsulatus str. Bath]
Length = 906
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G NFR L+ YK +RPP PD + ++ L ++AM + +IE V +D G
Sbjct: 62 VFDAPGRNFRDELFEHYKAHRPPMPDDLRSQIEPLHQVVRAMGLPMLIEPGVEADDVIG 120
>gi|258648865|ref|ZP_05736334.1| DNA polymerase type I [Prevotella tannerae ATCC 51259]
gi|260850887|gb|EEX70756.1| DNA polymerase type I [Prevotella tannerae ATCC 51259]
Length = 921
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G FRH YP YK R TP+ I + + +K I+A +I +IEV
Sbjct: 63 GPTFRHEAYPDYKAQREATPEDIKRSVPIIKDIIRAYNIPIIEV 106
>gi|300703485|ref|YP_003745087.1| DNA polymerase i (pol i) [Ralstonia solanacearum CFBP2957]
gi|299071148|emb|CBJ42461.1| DNA polymerase I (POL I) [Ralstonia solanacearum CFBP2957]
Length = 960
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +R P PD + Q ++ + +++A+ ++ V+ + D
Sbjct: 72 YSACVFDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILVVDGVEAD 130
>gi|207743834|ref|YP_002260226.1| dna polymeraseIprotein [Ralstonia solanacearum IPO1609]
gi|206595234|emb|CAQ62161.1| dna polymeraseIprotein [Ralstonia solanacearum IPO1609]
Length = 944
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +R P PD + Q ++ + +++A+ ++ V+ + D
Sbjct: 56 YSACVFDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILVVDGVEAD 114
>gi|83746523|ref|ZP_00943574.1| DNA polymerase I [Ralstonia solanacearum UW551]
gi|83726854|gb|EAP73981.1| DNA polymerase I [Ralstonia solanacearum UW551]
Length = 946
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +R P PD + Q ++ + +++A+ ++ V+ + D
Sbjct: 58 YSACVFDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILVVDGVEAD 116
>gi|402844159|ref|ZP_10892532.1| DNA-directed DNA polymerase [Klebsiella sp. OBRC7]
gi|402275566|gb|EJU24714.1| DNA-directed DNA polymerase [Klebsiella sp. OBRC7]
Length = 891
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V
Sbjct: 23 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLMAV 71
>gi|397655103|ref|YP_006495805.1| DNA polymerase I [Klebsiella oxytoca E718]
gi|394343856|gb|AFN29977.1| DNA polymerase I [Klebsiella oxytoca E718]
Length = 891
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V
Sbjct: 23 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLMAV 71
>gi|213022529|ref|ZP_03336976.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
Length = 478
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAIVKAMGLPLLAVSGVEAD 115
>gi|359798525|ref|ZP_09301096.1| DNA polymerase I [Achromobacter arsenitoxydans SY8]
gi|359363347|gb|EHK65073.1| DNA polymerase I [Achromobacter arsenitoxydans SY8]
Length = 905
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP YK++RPP P+ + ++ + +++A+ V+ + + D
Sbjct: 53 YAACIFDARGKTFRDDLYPEYKSHRPPMPEDLAAQIEPIHRAVRALGWPVLAIEGVEAD 111
>gi|423016455|ref|ZP_17007176.1| DNA polymerase I [Achromobacter xylosoxidans AXX-A]
gi|338780532|gb|EGP44939.1| DNA polymerase I [Achromobacter xylosoxidans AXX-A]
Length = 905
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP YK++RPP P+ + ++ + +++A+ V+ + + D
Sbjct: 53 YAACIFDARGKTFRDDLYPEYKSHRPPMPEDLAAQIEPIHRAVRALGWPVLAIEGVEAD 111
>gi|422322190|ref|ZP_16403232.1| DNA polymerase I [Achromobacter xylosoxidans C54]
gi|317402839|gb|EFV83381.1| DNA polymerase I [Achromobacter xylosoxidans C54]
Length = 948
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP YK++RPP P+ + ++ + +++A+ V+ + + D
Sbjct: 96 YAACIFDARGKTFRDDLYPEYKSHRPPMPEDLAAQIEPIHRAVRALGWPVLAIEGVEAD 154
>gi|354599764|ref|ZP_09017781.1| DNA polymerase I [Brenneria sp. EniD312]
gi|353677699|gb|EHD23732.1| DNA polymerase I [Brenneria sp. EniD312]
Length = 930
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFENYKSHRPPMPDDLREQIEPLHRMVKAMGLPLLAVSGVEAD 115
>gi|452204056|ref|YP_007484189.1| DNA polymerase I [Dehalococcoides mccartyi DCMB5]
gi|452111115|gb|AGG06847.1| DNA polymerase I [Dehalococcoides mccartyi DCMB5]
Length = 903
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 2 GESYGLLWRGFLSYNIRHDTYMTDITLDVHDL-YGACGMNFRHTLYPSYKNNRPPTPDTI 60
GE G + GF S I+ +TD+ D + + + G FRH ++ YK RPP PD +
Sbjct: 31 GEVVGAAF-GFASILIK---VLTDLKPDCYAISFDKKGPTFRHEMFKDYKAQRPPMPDEL 86
Query: 61 VQGLQYLKASIKAMSIKVIE 80
V L ++ + A ++ V E
Sbjct: 87 VSQLGRVRQIVDAFNMPVYE 106
>gi|73749074|ref|YP_308313.1| DNA-directed DNA polymerase I [Dehalococcoides sp. CBDB1]
gi|452205555|ref|YP_007485684.1| DNA polymerase I [Dehalococcoides mccartyi BTF08]
gi|73660790|emb|CAI83397.1| DNA-directed DNA polymerase I [Dehalococcoides sp. CBDB1]
gi|452112611|gb|AGG08342.1| DNA polymerase I [Dehalococcoides mccartyi BTF08]
Length = 903
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 2 GESYGLLWRGFLSYNIRHDTYMTDITLDVHDL-YGACGMNFRHTLYPSYKNNRPPTPDTI 60
GE G + GF S I+ +TD+ D + + + G FRH ++ YK RPP PD +
Sbjct: 31 GEVVGAAF-GFASILIK---VLTDLKPDCYAISFDKKGPTFRHEMFKDYKAQRPPMPDEL 86
Query: 61 VQGLQYLKASIKAMSIKVIE 80
V L ++ + A ++ V E
Sbjct: 87 VSQLGRVRQIVDAFNMPVYE 106
>gi|417719506|ref|ZP_12368388.1| DNA polymerase I domain protein [Shigella flexneri K-227]
gi|333014002|gb|EGK33363.1| DNA polymerase I domain protein [Shigella flexneri K-227]
Length = 223
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN-VMYEDAYG 90
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ V +D G
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119
>gi|293604245|ref|ZP_06686653.1| DNA polymerase I [Achromobacter piechaudii ATCC 43553]
gi|292817470|gb|EFF76543.1| DNA polymerase I [Achromobacter piechaudii ATCC 43553]
Length = 905
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP YK++RPP P+ + ++ + +++A+ V+ + + D
Sbjct: 53 YAACIFDARGKTFRDDLYPEYKSHRPPMPEDLAAQIEPIHRAVRALGWPVLAIEGVEAD 111
>gi|289433051|ref|YP_003462924.1| DNA polymerase I [Dehalococcoides sp. GT]
gi|288946771|gb|ADC74468.1| DNA polymerase I [Dehalococcoides sp. GT]
Length = 903
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 2 GESYGLLWRGFLSYNIRHDTYMTDITLDVHDL-YGACGMNFRHTLYPSYKNNRPPTPDTI 60
GE G + GF S I+ +TD+ D + + + G FRH ++ YK RPP PD +
Sbjct: 31 GEVVGAAF-GFASILIK---VLTDLKPDCYAISFDKKGPTFRHEMFKDYKAQRPPMPDEL 86
Query: 61 VQGLQYLKASIKAMSIKVIE 80
V L ++ + A ++ V E
Sbjct: 87 VSQLGRVRQIVDAFNMPVYE 106
>gi|147669839|ref|YP_001214657.1| DNA polymerase I [Dehalococcoides sp. BAV1]
gi|146270787|gb|ABQ17779.1| DNA polymerase I [Dehalococcoides sp. BAV1]
Length = 903
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 2 GESYGLLWRGFLSYNIRHDTYMTDITLDVHDL-YGACGMNFRHTLYPSYKNNRPPTPDTI 60
GE G + GF S I+ +TD+ D + + + G FRH ++ YK RPP PD +
Sbjct: 31 GEVVGAAF-GFASILIK---VLTDLKPDCYAISFDKKGPTFRHEMFKDYKAQRPPMPDEL 86
Query: 61 VQGLQYLKASIKAMSIKVIE 80
V L ++ + A ++ V E
Sbjct: 87 VSQLGRVRQIVDAFNMPVYE 106
>gi|421727940|ref|ZP_16167098.1| DNA polymerase I, partial [Klebsiella oxytoca M5al]
gi|410371423|gb|EKP26146.1| DNA polymerase I, partial [Klebsiella oxytoca M5al]
Length = 275
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V
Sbjct: 23 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLMAV 71
>gi|359428020|ref|ZP_09219063.1| DNA polymerase I [Acinetobacter sp. NBRC 100985]
gi|358236682|dbj|GAB00602.1| DNA polymerase I [Acinetobacter sp. NBRC 100985]
Length = 921
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA+ I
Sbjct: 64 FRHKLSPIYKGDRPSMPEELSQQIPYLHALIKALGI 99
>gi|372272296|ref|ZP_09508344.1| DNA polymerase I [Marinobacterium stanieri S30]
Length = 934
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKV-IEVNVMYEDAYG 90
++ A G FR +Y YK+ RPP PD + ++ + A I+AM + + +E V +D G
Sbjct: 82 IFDAKGKTFRDEIYAEYKSQRPPMPDDLRSQVEPIHAIIRAMGLPLYVEEGVEADDVIG 140
>gi|423105652|ref|ZP_17093354.1| DNA polymerase I [Klebsiella oxytoca 10-5242]
gi|376379896|gb|EHS92645.1| DNA polymerase I [Klebsiella oxytoca 10-5242]
Length = 926
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLMAV 109
>gi|375258171|ref|YP_005017341.1| DNA polymerase I [Klebsiella oxytoca KCTC 1686]
gi|365907649|gb|AEX03102.1| DNA polymerase I [Klebsiella oxytoca KCTC 1686]
Length = 929
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLMAV 109
>gi|423111124|ref|ZP_17098819.1| DNA polymerase I [Klebsiella oxytoca 10-5243]
gi|376377141|gb|EHS89913.1| DNA polymerase I [Klebsiella oxytoca 10-5243]
Length = 929
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLMAV 109
>gi|423117136|ref|ZP_17104827.1| DNA polymerase I [Klebsiella oxytoca 10-5245]
gi|376376437|gb|EHS89215.1| DNA polymerase I [Klebsiella oxytoca 10-5245]
Length = 929
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLMAV 109
>gi|373111034|ref|ZP_09525294.1| DNA polymerase I [Myroides odoratimimus CCUG 10230]
gi|371641095|gb|EHO06682.1| DNA polymerase I [Myroides odoratimimus CCUG 10230]
Length = 939
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G + R L+P YK NR TP+ I + Y+K ++AM I ++EV+
Sbjct: 66 GSDLRLELFPEYKANRDETPEAIKIAVPYIKQILEAMHIPIVEVS 110
>gi|423135955|ref|ZP_17123600.1| DNA polymerase I [Myroides odoratimimus CIP 101113]
gi|371639690|gb|EHO05305.1| DNA polymerase I [Myroides odoratimimus CIP 101113]
Length = 939
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G + R L+P YK NR TP+ I + Y+K ++AM I ++EV+
Sbjct: 66 GSDLRLELFPEYKANRDETPEAIKIAVPYIKQILEAMHIPIVEVS 110
>gi|423126574|ref|ZP_17114253.1| DNA polymerase I [Klebsiella oxytoca 10-5250]
gi|376396830|gb|EHT09467.1| DNA polymerase I [Klebsiella oxytoca 10-5250]
Length = 929
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLMAV 109
>gi|319787968|ref|YP_004147443.1| 5'-3' exonuclease [Pseudoxanthomonas suwonensis 11-1]
gi|317466480|gb|ADV28212.1| 5'-3' exonuclease, N-terminal resolvase-like domain
[Pseudoxanthomonas suwonensis 11-1]
Length = 326
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
FRH +YP+YK NR P PD + + + KA A+ + V+
Sbjct: 83 FRHRIYPAYKGNREPAPDELRRQFAHCKALCAALGLAVL 121
>gi|213580148|ref|ZP_03361974.1| DNA polymerase I [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 281
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAIVKAMGLPLLAVSGVEAD 115
>gi|294649387|ref|ZP_06726818.1| DNA-directed DNA polymerase [Acinetobacter haemolyticus ATCC
19194]
gi|292824757|gb|EFF83529.1| DNA-directed DNA polymerase [Acinetobacter haemolyticus ATCC
19194]
Length = 921
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA+ I
Sbjct: 64 FRHKLSPIYKGDRPSMPEELSQQIPYLHALIKALGI 99
>gi|226954287|ref|ZP_03824751.1| DNA polymerase I [Acinetobacter sp. ATCC 27244]
gi|226834958|gb|EEH67341.1| DNA polymerase I [Acinetobacter sp. ATCC 27244]
Length = 921
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA+ I
Sbjct: 64 FRHKLSPIYKGDRPSMPEELSQQIPYLHALIKALGI 99
>gi|383318117|ref|YP_005378959.1| DNA polymerase I [Frateuria aurantia DSM 6220]
gi|379045221|gb|AFC87277.1| DNA polymerase I [Frateuria aurantia DSM 6220]
Length = 948
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A G FRH YP YK RPP PD + +Q + + A+ + ++ +
Sbjct: 85 ASGPTFRHQQYPQYKAQRPPMPDDLRAQIQPMLDIVAALGVPILRI 130
>gi|303237984|ref|ZP_07324527.1| DNA-directed DNA polymerase [Prevotella disiens FB035-09AN]
gi|302481774|gb|EFL44826.1| DNA-directed DNA polymerase [Prevotella disiens FB035-09AN]
Length = 920
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G+ FRH +P YK R TP+ I + Y+K ++AM I +++ +
Sbjct: 62 GLTFRHEAFPDYKAQREETPEDIKLAVPYIKQILEAMRIPILQTD 106
>gi|91975436|ref|YP_568095.1| DNA polymerase I [Rhodopseudomonas palustris BisB5]
gi|91681892|gb|ABE38194.1| DNA polymerase I [Rhodopseudomonas palustris BisB5]
Length = 1033
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
FR+ +YP+YK +RPP PD ++ ++ +++A + +E
Sbjct: 97 FRNEMYPAYKAHRPPAPDDLIPQFALIREAVRAFDLPCLE 136
>gi|77361672|ref|YP_341247.1| multifunctional DNA polymerase I: 5'->3' exonuclease/3'->5'
polymerase/3'->5' exonuclease [Pseudoalteromonas
haloplanktis TAC125]
gi|76876583|emb|CAI87805.1| multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal);
3'->5' polymerase; 3'->5' exonuclease (C-terminal)
[Pseudoalteromonas haloplanktis TAC125]
Length = 911
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + + IKAM +I + + D
Sbjct: 61 IFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHRIIKAMGFPLISIEGVEAD 115
>gi|311281673|ref|YP_003943904.1| DNA polymerase I [Enterobacter cloacae SCF1]
gi|308750868|gb|ADO50620.1| DNA polymerase I [Enterobacter cloacae SCF1]
Length = 928
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVRAMGLPLLAVSGVEAD 115
>gi|338972126|ref|ZP_08627503.1| DNA polymerase I [Bradyrhizobiaceae bacterium SG-6C]
gi|338234644|gb|EGP09757.1| DNA polymerase I [Bradyrhizobiaceae bacterium SG-6C]
Length = 986
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ LYP YK RPP PD ++ ++ +++A + +E
Sbjct: 61 VTFRNKLYPDYKAQRPPAPDDLIPQFGLIREAVRAFDLPCLE 102
>gi|383482048|ref|YP_005390963.1| DNA polymerase I [Rickettsia rhipicephali str. 3-7-female6-CWPP]
gi|5912328|emb|CAB56093.1| DNA polymerase I [Rickettsia rhipicephali]
gi|378934387|gb|AFC72890.1| DNA polymerase I [Rickettsia rhipicephali str. 3-7-female6-CWPP]
Length = 875
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 2 GESYGLLWRGFLSYNIRHDTYMTDITLD-VHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
GE G L+ GF S ++ ++D V ++ + G NFRH +Y YK NRPP P+ +
Sbjct: 31 GEPVGALY-GFTSMLLK---LLSDFKPQHVAVVFDSGGKNFRHQIYSDYKANRPPPPEDL 86
Query: 61 VQGLQYLKASIKAMSIKVIEVN 82
+ L ++ ++ ++E N
Sbjct: 87 IVQLPLVRDVAGNLNFPILEKN 108
>gi|387128320|ref|YP_006296925.1| DNA polymerase I [Methylophaga sp. JAM1]
gi|386275382|gb|AFI85280.1| DNA polymerase I [Methylophaga sp. JAM1]
Length = 904
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR+ LY YK RPP PD + + ++ + +KAM + ++ + NV +D G
Sbjct: 59 VFDAKGKTFRNDLYAEYKATRPPMPDDLREQIEPIHEIVKAMGLPLLCIDNVEADDVIG 117
>gi|406914615|gb|EKD53778.1| hypothetical protein ACD_60C00155G0005 [uncultured bacterium]
Length = 897
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR +Y YK NRPP P+ +VQ + + I+A+ I ++ E V +D G
Sbjct: 60 VFDAKGKTFREEMYEKYKANRPPMPNELVQQISPIHDIIRALGIPLLMEEGVEADDIIG 118
>gi|33152330|ref|NP_873683.1| DNA polymerase I [Haemophilus ducreyi 35000HP]
gi|33148553|gb|AAP96072.1| DNA polymerase I [Haemophilus ducreyi 35000HP]
Length = 962
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + +Q L I+A+ I +I + + D
Sbjct: 61 VFDAKGKTFRDDLFEQYKSHRPPMPDELRAQIQPLHNIIRALGIPLISIEGVEAD 115
>gi|422021521|ref|ZP_16368033.1| DNA polymerase I [Providencia sneebia DSM 19967]
gi|414099379|gb|EKT61022.1| DNA polymerase I [Providencia sneebia DSM 19967]
Length = 928
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ SYK++RPP PD + + ++ L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFESYKSHRPPMPDDLREQIEPLHEMVEAMGLPLLVVSGVEAD 115
>gi|348027482|ref|YP_004870168.1| DNA polymerase I [Glaciecola nitratireducens FR1064]
gi|347944825|gb|AEP28175.1| DNA polymerase I [Glaciecola nitratireducens FR1064]
Length = 932
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR +Y YK NRPP PD + ++ L I AM +I E V +D G
Sbjct: 62 VFDAKGKTFRDDIYKEYKANRPPMPDELRSQIKPLHKIISAMGFPIIVEDGVEADDVIG 120
>gi|373487712|ref|ZP_09578379.1| DNA polymerase I [Holophaga foetida DSM 6591]
gi|372008787|gb|EHP09412.1| DNA polymerase I [Holophaga foetida DSM 6591]
Length = 933
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FRH +YP YK NRP P+ + + ++ I+A++I ++E+
Sbjct: 60 FRHEIYPDYKANRPDMPEDLRPQIPLIRELIQALNIPIVEL 100
>gi|409195816|ref|ZP_11224479.1| DNA polymerase I [Marinilabilia salmonicolor JCM 21150]
Length = 924
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G FR+ L+ YK NR TP+ I + + Y+K ++A +I VI+V+
Sbjct: 67 GPTFRNELFKEYKANRDATPEDIKKAVPYIKQILEAFNISVIQVD 111
>gi|357418275|ref|YP_004931295.1| exodeoxyribonuclease IX [Pseudoxanthomonas spadix BD-a59]
gi|355335853|gb|AER57254.1| exodeoxyribonuclease IX [Pseudoxanthomonas spadix BD-a59]
Length = 316
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
FRHTLYP+YK NR P P + + + KA A+ V+
Sbjct: 66 FRHTLYPAYKGNREPAPAELRRQFTHCKALCAALGFNVL 104
>gi|347758973|ref|YP_004866535.1| DNA polymerase I family protein [Micavibrio aeruginosavorus ARL-13]
gi|347591491|gb|AEP10533.1| DNA polymerase I family protein [Micavibrio aeruginosavorus ARL-13]
Length = 942
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 23 MTDITLDVHD-----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK 77
MT + D+H ++ A NFR+ +YP YK NR TP+ + ++ + KA I
Sbjct: 53 MTKLLADMHAPFIAVIFDAARQNFRYDIYPEYKANRDETPEDLKPQFGLIREATKAFGIP 112
Query: 78 VIEV 81
+E+
Sbjct: 113 ALEM 116
>gi|119946792|ref|YP_944472.1| multifunctional 5'-3' exonuclease/3'-5' polymerase/3'-5'
exonuclease [Psychromonas ingrahamii 37]
gi|119865396|gb|ABM04873.1| fused DNA polymerase 5'->3' exonuclease and 3'->5' polymerase and
3'->5' exonuclease [Psychromonas ingrahamii 37]
Length = 938
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +Y YK+NRP PD + ++ L A IKAM + ++ +
Sbjct: 61 VFDAKGKTFRDDMYTEYKSNRPSMPDDLRIQIEPLHAVIKAMGLPILTI 109
>gi|421596901|ref|ZP_16040621.1| DNA polymerase I, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404270986|gb|EJZ34946.1| DNA polymerase I, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 316
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 7 LLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQY 66
+LW+ L ++ D T + + ++ + FR+ +YP YK +RPP PD ++
Sbjct: 87 MLWK--LLRDMPEDNRPTHLAI----IFDKSEITFRNKIYPDYKAHRPPAPDDLIPQFAL 140
Query: 67 LKASIKAMSIKVIE 80
++ +++A + +E
Sbjct: 141 IREAVRAFDLPCLE 154
>gi|380512069|ref|ZP_09855476.1| DNA polymerase I [Xanthomonas sacchari NCPPB 4393]
Length = 923
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
A G FR LYP YK NRPP PD + ++ + + A+ I ++ E V +D G
Sbjct: 58 APGKTFRDDLYPQYKANRPPMPDELRAQVEPMCQIVHALGITILREDGVEADDVIG 113
>gi|338730077|ref|YP_004659469.1| DNA polymerase I [Thermotoga thermarum DSM 5069]
gi|335364428|gb|AEH50373.1| DNA polymerase I [Thermotoga thermarum DSM 5069]
Length = 893
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 27/39 (69%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
+RH + +YK R P PD ++Q + Y++ +++A+ +KV+
Sbjct: 67 YRHEILATYKAQRKPAPDAMIQQIPYIQRAVEALGVKVL 105
>gi|431929285|ref|YP_007242319.1| DNA polymerase I [Pseudomonas stutzeri RCH2]
gi|431827572|gb|AGA88689.1| DNA polymerase I [Pseudomonas stutzeri RCH2]
Length = 914
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + ++ L AS++A+ + ++ V + D
Sbjct: 58 VFDAKGPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEAD 112
>gi|421615320|ref|ZP_16056346.1| DNA polymerase I [Pseudomonas stutzeri KOS6]
gi|409782708|gb|EKN62259.1| DNA polymerase I [Pseudomonas stutzeri KOS6]
Length = 914
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + ++ L AS++A+ + ++ V + D
Sbjct: 58 VFDAKGPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEAD 112
>gi|392423186|ref|YP_006459790.1| DNA polymerase I [Pseudomonas stutzeri CCUG 29243]
gi|390985374|gb|AFM35367.1| DNA polymerase I [Pseudomonas stutzeri CCUG 29243]
Length = 914
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + ++ L AS++A+ + ++ V + D
Sbjct: 58 VFDAKGPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEAD 112
>gi|418294587|ref|ZP_12906478.1| DNA polymerase I [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379065961|gb|EHY78704.1| DNA polymerase I [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 914
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + ++ L AS++A+ + ++ V + D
Sbjct: 58 VFDAKGPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEAD 112
>gi|220933279|ref|YP_002512178.1| DNA polymerase I [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219994589|gb|ACL71191.1| DNA polymerase I [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 903
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +Y YK NRPP PD + ++ L ++AM + ++ V
Sbjct: 59 VFDAKGKTFRDEMYAEYKANRPPMPDELAAQVEPLHQVVQAMGLPMLVV 107
>gi|27383242|ref|NP_774771.1| DNA polymerase I [Bradyrhizobium japonicum USDA 110]
gi|27356416|dbj|BAC53396.1| DNA polymerase I [Bradyrhizobium japonicum USDA 110]
Length = 1023
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ +YP YK +RPP PD ++ ++ +++A + +E
Sbjct: 110 VTFRNKIYPEYKAHRPPAPDDLIPQFALIREAVRAFDLPCLE 151
>gi|414165088|ref|ZP_11421335.1| DNA polymerase I [Afipia felis ATCC 53690]
gi|410882868|gb|EKS30708.1| DNA polymerase I [Afipia felis ATCC 53690]
Length = 1007
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ +YP YK +RPP PD ++ ++ +++A + +E
Sbjct: 94 VTFRNKIYPEYKAHRPPAPDDLIPQFALIREAVRAFDLPCLE 135
>gi|421746990|ref|ZP_16184743.1| DNA polymerase I, partial [Cupriavidus necator HPC(L)]
gi|409774428|gb|EKN56051.1| DNA polymerase I, partial [Cupriavidus necator HPC(L)]
Length = 302
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +RP PD + + ++ + +++A+ ++ V+ + D
Sbjct: 56 YSACVFDAKGKTFRDALYPAYKEHRPSMPDDLARQIEPIHEAVRALGWPIVVVDGVEAD 114
>gi|398822882|ref|ZP_10581256.1| DNA polymerase I [Bradyrhizobium sp. YR681]
gi|398226490|gb|EJN12738.1| DNA polymerase I [Bradyrhizobium sp. YR681]
Length = 1013
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ +YP YK +RPP PD ++ ++ +++A + +E
Sbjct: 100 VTFRNKIYPEYKAHRPPAPDDLIPQFALIREAVRAFDLPCLE 141
>gi|384214899|ref|YP_005606063.1| DNA polymerase I [Bradyrhizobium japonicum USDA 6]
gi|354953796|dbj|BAL06475.1| DNA polymerase I [Bradyrhizobium japonicum USDA 6]
Length = 1013
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ +YP YK +RPP PD ++ ++ +++A + +E
Sbjct: 100 VTFRNKIYPEYKAHRPPAPDDLIPQFALIREAVRAFDLPCLE 141
>gi|299132621|ref|ZP_07025816.1| DNA polymerase I [Afipia sp. 1NLS2]
gi|298592758|gb|EFI52958.1| DNA polymerase I [Afipia sp. 1NLS2]
Length = 1008
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ +YP YK +RPP PD ++ ++ +++A + +E
Sbjct: 94 VTFRNKIYPEYKAHRPPAPDDLIPQFALIREAVRAFDLPCLE 135
>gi|308805154|ref|XP_003079889.1| DNA polymerase type I (ISS) [Ostreococcus tauri]
gi|116058346|emb|CAL53535.1| DNA polymerase type I (ISS) [Ostreococcus tauri]
Length = 322
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
A G FRH ++ YK NRPPTP+ +++ + ++ ++ M + V+ ++ + D
Sbjct: 77 AKGKTFRHEMFVDYKANRPPTPEPLLEVIPKVEQLVRDMGVPVLRLSGVEAD 128
>gi|52424280|ref|YP_087417.1| DNA polymerase I [Mannheimia succiniciproducens MBEL55E]
gi|52306332|gb|AAU36832.1| PolA protein [Mannheimia succiniciproducens MBEL55E]
Length = 965
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + + +Q L I+A+ I ++ + + D
Sbjct: 70 VFDAKGKTFRDELFEQYKSHRPPMPDDLRKQIQPLHDIIRALGIPLLSIEGVEAD 124
>gi|392310092|ref|ZP_10272626.1| DNA polymerase I [Pseudoalteromonas citrea NCIMB 1889]
Length = 915
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR+ +Y YK NRPP PD + ++ + IKAM + ++
Sbjct: 61 VFDAKGPTFRNEMYSEYKANRPPMPDDLRTQIEPIHEIIKAMGLPLV 107
>gi|358013037|ref|ZP_09144847.1| DNA polymerase I [Acinetobacter sp. P8-3-8]
Length = 924
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A I+A+ I
Sbjct: 64 FRHELSPIYKGDRPSMPEELAQQIPYLHALIRALGI 99
>gi|426402006|ref|YP_007020978.1| DNA polymerase I family protein [Candidatus Endolissoclinum patella
L2]
gi|425858674|gb|AFX99710.1| DNA polymerase I family protein [Candidatus Endolissoclinum patella
L2]
Length = 955
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ C +FRH +Y YK NRP P+ +++ ++ +I A ++ IE+
Sbjct: 85 IFDNCRFSFRHRIYHHYKANRPELPEDLIKQFPLIREAIMAFNVPCIEM 133
>gi|339319926|ref|YP_004679621.1| DNA polymerase I [Candidatus Midichloria mitochondrii IricVA]
gi|338226051|gb|AEI88935.1| DNA polymerase I [Candidatus Midichloria mitochondrii IricVA]
Length = 847
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 11 GFLSYNIR----HDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQY 66
GF++ I+ H M + LD + N RH L+P YK NRP PD +
Sbjct: 35 GFVNMMIKLCDSHKADMIAVVLD------SGSKNHRHELFPEYKANRPTLPDDLKVQFPI 88
Query: 67 LKASIKAMSIKVIEVN 82
++ +++A++I ++ V+
Sbjct: 89 IREALQALNITIVGVD 104
>gi|225629756|ref|ZP_03787705.1| DNA polymerase I [Wolbachia endosymbiont of Muscidifurax uniraptor]
gi|225591390|gb|EEH12481.1| DNA polymerase I [Wolbachia endosymbiont of Muscidifurax uniraptor]
Length = 261
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 1 MGESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
+G YG L L Y I H Y+T I LD A NFRH LYP YK NR P+ +
Sbjct: 33 IGGVYGFL-NMVLKY-IAHSDYLT-IALD------AGKKNFRHNLYPEYKANRVTPPEDL 83
Query: 61 VQGLQYLKASIKAMSIKVIEV 81
L+ +++A ++ E+
Sbjct: 84 TPQFTILREAVEAFNLSYEEI 104
>gi|329897110|ref|ZP_08271855.1| DNA polymerase I [gamma proteobacterium IMCC3088]
gi|328921434|gb|EGG28823.1| DNA polymerase I [gamma proteobacterium IMCC3088]
Length = 908
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR ++P YK RPP PD + ++ L A +KA+ +I E V +D G
Sbjct: 59 VFDAKGPTFRDEMFPDYKAQRPPMPDELRTQIEPLHAIVKALGYPLICEPGVEADDVIG 117
>gi|239814549|ref|YP_002943459.1| DNA polymerase I [Variovorax paradoxus S110]
gi|239801126|gb|ACS18193.1| DNA polymerase I [Variovorax paradoxus S110]
Length = 940
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 23 MTDITLDVHDLYGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK 77
MT + +V Y AC G FR LYP YK NR P PD + + + +K M
Sbjct: 48 MTALRREVRADYAACIFDAPGKTFRDDLYPEYKANRSPMPDDLRSQIDPIHEVVKLMGWP 107
Query: 78 VIEV-NVMYEDAYG 90
V+ V ++ +D G
Sbjct: 108 VLCVPDIEADDVIG 121
>gi|58696948|ref|ZP_00372442.1| DNA polymerase I [Wolbachia endosymbiont of Drosophila simulans]
gi|58536818|gb|EAL60040.1| DNA polymerase I [Wolbachia endosymbiont of Drosophila simulans]
Length = 817
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 17 IRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
I H Y+T I LD A NFRH LYP YK NR P+ + L+ +++A ++
Sbjct: 6 IAHSDYLT-IALD------AGKKNFRHDLYPEYKANRVTPPEDLTPQFTILREAVEAFNL 58
Query: 77 KVIEV 81
E+
Sbjct: 59 SYEEI 63
>gi|372487149|ref|YP_005026714.1| DNA polymerase I [Dechlorosoma suillum PS]
gi|359353702|gb|AEV24873.1| DNA polymerase I [Dechlorosoma suillum PS]
Length = 910
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKA 73
++ A G FR YP YK RPP P +V ++ L A+IKA
Sbjct: 59 VFDAKGKTFRDDWYPEYKAQRPPMPTDLVAQIEPLHAAIKA 99
>gi|238755604|ref|ZP_04616941.1| DNA polymerase I [Yersinia ruckeri ATCC 29473]
gi|238706204|gb|EEP98584.1| DNA polymerase I [Yersinia ruckeri ATCC 29473]
Length = 934
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLAVSGVEAD 115
>gi|91787611|ref|YP_548563.1| DNA polymerase I [Polaromonas sp. JS666]
gi|91696836|gb|ABE43665.1| DNA polymerase I [Polaromonas sp. JS666]
Length = 944
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 23 MTDITLDVHDLYGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK 77
M + DV Y AC G FR LYP YK R P PD + ++ + ++ + K
Sbjct: 49 MQKLRKDVRADYAACVFDAKGPTFRDALYPQYKAQRSPMPDDLRSQVEPIHEVVRLLGWK 108
Query: 78 VIEV 81
V++V
Sbjct: 109 VLDV 112
>gi|345301541|ref|YP_004830899.1| DNA polymerase I [Enterobacter asburiae LF7a]
gi|345095478|gb|AEN67114.1| DNA polymerase I [Enterobacter asburiae LF7a]
Length = 929
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEDYKSHRPPMPDDLRAQIEPLHTMVKAMGLPLLAVSGVEAD 115
>gi|326386581|ref|ZP_08208203.1| DNA polymerase I [Novosphingobium nitrogenifigens DSM 19370]
gi|326208896|gb|EGD59691.1| DNA polymerase I [Novosphingobium nitrogenifigens DSM 19370]
Length = 994
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 1 MGESYG---LLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTP 57
+G YG +LW+ + D + D + + + FR+ LY +YK NRPP P
Sbjct: 85 VGAVYGYTTMLWK------LAEDLHAADGPTHLAVILDKGSVTFRNELYDAYKANRPPPP 138
Query: 58 DTIVQGLQYLKASIKAMSIKVIE 80
+ +V ++ + +A S+ IE
Sbjct: 139 EDLVPQFPLIRDATRAFSLACIE 161
>gi|291550064|emb|CBL26326.1| DNA polymerase I [Ruminococcus torques L2-14]
Length = 871
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 5 YGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGL 64
YG L F + Y+T +T DVH FRH ++ YK R P + + Q +
Sbjct: 36 YGFLNIMFKILDEEKPEYLT-VTFDVH------APTFRHEMFADYKGTRKPMAEELRQQV 88
Query: 65 QYLKASIKAMSIKVIE 80
+K ++AM I+VIE
Sbjct: 89 PVIKDVLRAMHIEVIE 104
>gi|304309855|ref|YP_003809453.1| DNA polymerase A [gamma proteobacterium HdN1]
gi|301795588|emb|CBL43787.1| DNA polymerase A [gamma proteobacterium HdN1]
Length = 920
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++P YK RPP PD + ++ L I+A+ + +I ++ + D
Sbjct: 59 IFDAKGKTFRDDIFPEYKAQRPPMPDDLRAQIEPLYDCIRALGLPLISISGVEAD 113
>gi|254360483|ref|ZP_04976632.1| DNA-directed DNA polymerase I [Mannheimia haemolytica PHL213]
gi|452743761|ref|ZP_21943621.1| DNA polymerase I [Mannheimia haemolytica serotype 6 str. H23]
gi|153091023|gb|EDN73028.1| DNA-directed DNA polymerase I [Mannheimia haemolytica PHL213]
gi|452088205|gb|EME04568.1| DNA polymerase I [Mannheimia haemolytica serotype 6 str. H23]
Length = 952
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L IKA+ I +I + + D
Sbjct: 61 VFDAKGKTFRDELFKQYKSHRPPMPDDLRPQIEPLHRIIKALGIPLISIEGVEAD 115
>gi|448748354|ref|ZP_21729991.1| DNA polymerase 1 [Halomonas titanicae BH1]
gi|445564056|gb|ELY20186.1| DNA polymerase 1 [Halomonas titanicae BH1]
Length = 931
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR LY YK +RPP PD + + L A +KA+ + ++ V+ + D
Sbjct: 60 VFDAPGKTFRDELYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCVDGVEAD 114
>gi|338707930|ref|YP_004662131.1| DNA polymerase I [Zymomonas mobilis subsp. pomaceae ATCC 29192]
gi|336294734|gb|AEI37841.1| DNA polymerase I [Zymomonas mobilis subsp. pomaceae ATCC 29192]
Length = 919
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 2 GESYG---LLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPD 58
G YG +LW+ L N+R T + ++ + NFR +Y YK +RPP P+
Sbjct: 38 GAVYGFTTMLWK--LIENVRKQDGPTHFAV----IFDSSRKNFRQAIYSEYKAHRPPPPE 91
Query: 59 TIVQGLQYLKASIKAMSIKVIE 80
+V ++ + +A S+ +E
Sbjct: 92 DLVPQFPLIREATRAFSVPCLE 113
>gi|402758505|ref|ZP_10860761.1| DNA polymerase I [Acinetobacter sp. NCTC 7422]
Length = 921
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPSMPEELSQQIPYLHALIKAQGI 99
>gi|212702438|ref|ZP_03310566.1| hypothetical protein DESPIG_00455 [Desulfovibrio piger ATCC 29098]
gi|212674099|gb|EEB34582.1| DNA-directed DNA polymerase [Desulfovibrio piger ATCC 29098]
Length = 919
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKV 78
G NFRH ++P YK NR TP+ +V+ L ++ ++A+ +++
Sbjct: 71 GPNFRHEIFPLYKANRDATPEDLVRQLDPIQRMVRALGLRL 111
>gi|68249450|ref|YP_248562.1| DNA polymerase I [Haemophilus influenzae 86-028NP]
gi|68057649|gb|AAX87902.1| DNA polymerase I [Haemophilus influenzae 86-028NP]
Length = 930
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRNEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|87120949|ref|ZP_01076841.1| DNA polymerase I [Marinomonas sp. MED121]
gi|86163787|gb|EAQ65060.1| DNA polymerase I [Marinomonas sp. MED121]
Length = 925
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +YP YK RP PD + ++ + + IKAM + +I +
Sbjct: 74 IFDAKGKTFRDDMYPEYKAQRPSMPDDLRLQIEPIHSIIKAMGLPLISI 122
>gi|385786657|ref|YP_005817766.1| DNA polymerase I [Erwinia sp. Ejp617]
gi|310765929|gb|ADP10879.1| DNA polymerase I [Erwinia sp. Ejp617]
Length = 929
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + ++ L +KAM + ++ ++ + D
Sbjct: 61 VFDAKGKTFRDELFDAYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLLAISGVEAD 115
>gi|251793585|ref|YP_003008314.1| DNA polymerase I [Aggregatibacter aphrophilus NJ8700]
gi|422337267|ref|ZP_16418238.1| DNA polymerase I [Aggregatibacter aphrophilus F0387]
gi|247534981|gb|ACS98227.1| DNA polymerase I (POL I) [Aggregatibacter aphrophilus NJ8700]
gi|353345481|gb|EHB89773.1| DNA polymerase I [Aggregatibacter aphrophilus F0387]
Length = 985
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN-VMYEDAYG 90
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V V +D G
Sbjct: 114 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEADDVIG 172
>gi|259906706|ref|YP_002647062.1| DNA polymerase I [Erwinia pyrifoliae Ep1/96]
gi|387869406|ref|YP_005800775.1| DNA polymerase I [Erwinia pyrifoliae DSM 12163]
gi|224962328|emb|CAX53783.1| DNA polymerase I [Erwinia pyrifoliae Ep1/96]
gi|283476488|emb|CAY72303.1| DNA polymerase I [Erwinia pyrifoliae DSM 12163]
Length = 929
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + ++ L +KAM + ++ ++ + D
Sbjct: 61 VFDAKGKTFRDELFDAYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLLAISGVEAD 115
>gi|432687688|ref|ZP_19922974.1| DNA polymerase I [Escherichia coli KTE156]
gi|431218790|gb|ELF16222.1| DNA polymerase I [Escherichia coli KTE156]
Length = 928
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHTMVKAMGLPLLAVSGVEAD 115
>gi|418054846|ref|ZP_12692902.1| DNA polymerase I [Hyphomicrobium denitrificans 1NES1]
gi|353212471|gb|EHB77871.1| DNA polymerase I [Hyphomicrobium denitrificans 1NES1]
Length = 998
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ A FR+ +YP YK RPP P+ ++ ++ +++A ++ IE++
Sbjct: 87 IFDAGRETFRNEIYPKYKAQRPPPPEELIPQFPLIRDAVRAFNVACIELD 136
>gi|261878884|ref|ZP_06005311.1| DNA-directed DNA polymerase I, partial [Prevotella bergensis DSM
17361]
gi|270334524|gb|EFA45310.1| DNA-directed DNA polymerase I [Prevotella bergensis DSM 17361]
Length = 661
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G FRH +P YK R TP+ I + +++ +KAM I +++VN
Sbjct: 62 GKTFRHEAFPPYKAQREATPEDIKLSVPHIQDILKAMHIPILQVN 106
>gi|154502707|ref|ZP_02039767.1| hypothetical protein RUMGNA_00520 [Ruminococcus gnavus ATCC 29149]
gi|153796590|gb|EDN79010.1| DNA-directed DNA polymerase [Ruminococcus gnavus ATCC 29149]
Length = 871
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 22 YMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
Y+T +T DVH FRH ++ YK R P + + Q + +K +KAM I +IE
Sbjct: 53 YLT-VTFDVH------APTFRHEMFADYKGTRKPMAEELRQQVPVIKEVLKAMDIAIIE 104
>gi|153840365|ref|ZP_01993032.1| DNA polymerase I [Vibrio parahaemolyticus AQ3810]
gi|149745970|gb|EDM57100.1| DNA polymerase I [Vibrio parahaemolyticus AQ3810]
Length = 323
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR +Y YK NRPP PD + ++ L I+AM + +I V V +D G
Sbjct: 61 VFDAKGKTFRDEMYSEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICVPGVEADDVIG 119
>gi|409394912|ref|ZP_11246055.1| DNA polymerase I [Pseudomonas sp. Chol1]
gi|409396448|ref|ZP_11247434.1| DNA polymerase I [Pseudomonas sp. Chol1]
gi|409118929|gb|EKM95319.1| DNA polymerase I [Pseudomonas sp. Chol1]
gi|409120427|gb|EKM96772.1| DNA polymerase I [Pseudomonas sp. Chol1]
Length = 914
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A+++A+ + ++ V+ + D
Sbjct: 58 VFDAKGPTFRDELFEHYKSHRPPMPDDLRVQIEPLHAAVRALGLPLLNVDGVEAD 112
>gi|403745853|ref|ZP_10954601.1| DNA polymerase I [Alicyclobacillus hesperidum URH17-3-68]
gi|403121197|gb|EJY55521.1| DNA polymerase I [Alicyclobacillus hesperidum URH17-3-68]
Length = 882
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FRH Y YK R TPD +VQ + +++A+SI V+E+
Sbjct: 67 FRHAEYAEYKGTRQQTPDDLVQQFPLARQTLEALSIPVVEL 107
>gi|344941875|ref|ZP_08781163.1| DNA polymerase I [Methylobacter tundripaludum SV96]
gi|344263067|gb|EGW23338.1| DNA polymerase I [Methylobacter tundripaludum SV96]
Length = 930
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 19 HDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK- 77
H Y+T + + A G FR+ LY YK +RPP PD + + L I+AM +
Sbjct: 67 HSDYITVV-------FDAPGKTFRNELYDQYKAHRPPMPDDLRVQIAPLHNLIRAMGLPL 119
Query: 78 VIEVNVMYEDAYG 90
+IE V +D G
Sbjct: 120 IIESGVEADDVLG 132
>gi|126666558|ref|ZP_01737536.1| DNA polymerase I [Marinobacter sp. ELB17]
gi|126628946|gb|EAZ99565.1| DNA polymerase I [Marinobacter sp. ELB17]
Length = 926
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ LYP YK NRPP P+ + ++ + ++ M + ++ V+ + D
Sbjct: 61 VFDAKGKTFRNDLYPDYKANRPPMPEDLAVQIEPIHQIVRHMGLPLLIVDGVEAD 115
>gi|365121705|ref|ZP_09338620.1| DNA polymerase I [Tannerella sp. 6_1_58FAA_CT1]
gi|363644992|gb|EHL84272.1| DNA polymerase I [Tannerella sp. 6_1_58FAA_CT1]
Length = 926
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
G FRH Y YK R TP+ I Q + +K IKA +I +IEV
Sbjct: 65 GPTFRHEAYELYKAQREETPEVIRQSVPIIKEIIKAYNIPIIEV 108
>gi|445421530|ref|ZP_21435932.1| DNA-directed DNA polymerase [Acinetobacter sp. WC-743]
gi|444757498|gb|ELW82020.1| DNA-directed DNA polymerase [Acinetobacter sp. WC-743]
Length = 920
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A I+A+ I
Sbjct: 64 FRHQLSPIYKGDRPSMPEELSQQIPYLHALIRALGI 99
>gi|403054037|ref|ZP_10908521.1| DNA polymerase I [Acinetobacter bereziniae LMG 1003]
Length = 920
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A I+A+ I
Sbjct: 64 FRHQLSPIYKGDRPSMPEELSQQIPYLHALIRALGI 99
>gi|94986547|ref|YP_594480.1| DNA polymerase I [Lawsonia intracellularis PHE/MN1-00]
gi|442555361|ref|YP_007365186.1| DNA polymerase I [Lawsonia intracellularis N343]
gi|94730796|emb|CAJ54158.1| DNA polymerase I-3'-5' exonuclease and polymerase domains [Lawsonia
intracellularis PHE/MN1-00]
gi|441492808|gb|AGC49502.1| DNA polymerase I [Lawsonia intracellularis N343]
Length = 868
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
G NFRHTL+P YK R P P+ +++ ++ +K + ++ +
Sbjct: 69 GTNFRHTLFPLYKAQRSPAPEALIKQIEPIKRLVISLGL 107
>gi|419280388|ref|ZP_13822628.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC10E]
gi|378124347|gb|EHW85756.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC10E]
Length = 884
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP P+ + ++ L A +KAM + ++ V+ + D
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPNDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 71
>gi|417295690|ref|ZP_12082937.1| DNA-directed DNA polymerase [Escherichia coli 900105 (10e)]
gi|419218359|ref|ZP_13761344.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC8D]
gi|419263449|ref|ZP_13805855.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC10B]
gi|419274946|ref|ZP_13817232.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC10D]
gi|378057006|gb|EHW19242.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC8D]
gi|378102611|gb|EHW64287.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC10B]
gi|378113228|gb|EHW74799.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC10D]
gi|386259134|gb|EIJ14608.1| DNA-directed DNA polymerase [Escherichia coli 900105 (10e)]
Length = 884
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP P+ + ++ L A +KAM + ++ V+ + D
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPNDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 71
>gi|331000437|ref|ZP_08324112.1| DNA-directed DNA polymerase [Parasutterella excrementihominis YIT
11859]
gi|329571769|gb|EGG53449.1| DNA-directed DNA polymerase [Parasutterella excrementihominis YIT
11859]
Length = 950
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 21/85 (24%)
Query: 10 RGFLSYNIRHDTYMTDITLDVHDLYGAC-----GMNFRHTLYPSYKNNRPPTPDT----- 59
RGFLS +R M D+ D Y AC G FR +YP YK NRPP P+
Sbjct: 50 RGFLSM-LR--VLMKDVPTD----YVACVVDPKGKTFRSDIYPDYKANRPPMPEDLSVQI 102
Query: 60 --IVQGLQYLKASIKAMSIKVIEVN 82
I +G+Q K I + I IE +
Sbjct: 103 PLIFEGVQ--KEGIPFLQIPGIEAD 125
>gi|219815963|gb|ACL37083.1| DNA polymerase I [uncultured bacterium]
Length = 647
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A I+A+ I
Sbjct: 64 FRHVLSPIYKGDRPSMPEELSQQIPYLHALIRALGI 99
>gi|88607943|ref|YP_504640.1| DNA polymerase I [Anaplasma phagocytophilum HZ]
gi|88599006|gb|ABD44476.1| DNA polymerase I [Anaplasma phagocytophilum HZ]
Length = 853
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 11 GFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKAS 70
GF++ ++H ++ L V ++ + NFRHT+Y YK NRP P+ + L+ +
Sbjct: 39 GFINILLKHLSFHDADYLVV--VFDSGSKNFRHTMYSEYKTNRPKAPEDLSLQCAPLREA 96
Query: 71 IKAMSIKVIEV 81
++A +I EV
Sbjct: 97 VEAFNIVSEEV 107
>gi|261494497|ref|ZP_05990983.1| DNA-directed DNA polymerase I [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309881|gb|EEY11098.1| DNA-directed DNA polymerase I [Mannheimia haemolytica serotype A2
str. OVINE]
Length = 952
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
G FR+ L+ YK++RPP PD + ++ L IKA+ I +I + + D
Sbjct: 66 GKTFRYELFKQYKSHRPPMPDDLRPQIEPLHRIIKALGIPLISIEGVEAD 115
>gi|354725732|ref|ZP_09039947.1| DNA polymerase I [Enterobacter mori LMG 25706]
Length = 930
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHTMVKAMGLPLLAVSGVEAD 115
>gi|374334321|ref|YP_005091008.1| DNA polymerase I [Oceanimonas sp. GK1]
gi|372984008|gb|AEY00258.1| DNA polymerase I [Oceanimonas sp. GK1]
Length = 911
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FR +YP YK +RP PD + +Q + I+AM + +IE V +D G
Sbjct: 63 VFDAKGKTFRDDIYPEYKAHRPSMPDDLRSQIQPIHDIIRAMGLPLLIEEGVEADDVIG 121
>gi|261342936|ref|ZP_05970794.1| hypothetical protein ENTCAN_09533 [Enterobacter cancerogenus ATCC
35316]
gi|288314684|gb|EFC53622.1| DNA polymerase I [Enterobacter cancerogenus ATCC 35316]
Length = 930
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHTMVKAMGLPLLAVSGVEAD 115
>gi|12001916|gb|AAG43101.1|AF038541_1 DNA polymerase I [Acinetobacter calcoaceticus]
Length = 923
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPSMPEELSQQIPYLHALIKAQGI 99
>gi|415756317|ref|ZP_11481025.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D17P-3]
gi|348655828|gb|EGY71260.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D17P-3]
Length = 895
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 23 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 77
>gi|222054507|ref|YP_002536869.1| DNA polymerase I [Geobacter daltonii FRC-32]
gi|221563796|gb|ACM19768.1| DNA polymerase I [Geobacter daltonii FRC-32]
Length = 891
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A + FR+ +YP+YK NR PD + ++ +K +++A I V+E+
Sbjct: 59 VFDAGKLTFRNEIYPAYKANRSAMPDDLRLQIEPIKEAVRAFRIPVLEL 107
>gi|90426328|ref|YP_534698.1| DNA polymerase I [Rhodopseudomonas palustris BisB18]
gi|90108342|gb|ABD90379.1| DNA polymerase I [Rhodopseudomonas palustris BisB18]
Length = 1021
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
FR+ LYP YK RPP PD ++ ++ +++A + +E
Sbjct: 88 FRNELYPLYKAQRPPAPDDLIPQFALIREAVRAFDLPCLE 127
>gi|420104970|ref|ZP_14615562.1| DNA polymerase I [Escherichia coli O111:H11 str. CVM9455]
gi|394400822|gb|EJE76714.1| DNA polymerase I [Escherichia coli O111:H11 str. CVM9455]
Length = 928
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP P+ + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPNDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|85710997|ref|ZP_01042058.1| DNA polymerase I [Idiomarina baltica OS145]
gi|85695401|gb|EAQ33338.1| DNA polymerase I [Idiomarina baltica OS145]
Length = 924
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK +RPP PD + ++ L A +KAM + ++ V + D
Sbjct: 62 VFDAKGKTFRSDIYDEYKAHRPPMPDDLRTQIEPLHAIVKAMGLPLLCVEGVEAD 116
>gi|409203693|ref|ZP_11231896.1| DNA polymerase I [Pseudoalteromonas flavipulchra JG1]
Length = 918
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK +RPP PD + ++ + IKAM + ++ ++ + D
Sbjct: 61 VFDAKGPTFRNEMYSEYKAHRPPMPDDLRTQIEPIHEIIKAMGLPLVSISGVEAD 115
>gi|406036838|ref|ZP_11044202.1| DNA polymerase I [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 926
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPSMPEELSQQIPYLHALIKAQGI 99
>gi|398796189|ref|ZP_10555817.1| DNA polymerase I [Pantoea sp. YR343]
gi|398204041|gb|EJM90853.1| DNA polymerase I [Pantoea sp. YR343]
Length = 930
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHEMVKAMGLPLLAVSGVEAD 115
>gi|398797234|ref|ZP_10556557.1| DNA polymerase I [Pantoea sp. GM01]
gi|398103354|gb|EJL93524.1| DNA polymerase I [Pantoea sp. GM01]
Length = 930
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHEMVKAMGLPLLAVSGVEAD 115
>gi|302344141|ref|YP_003808670.1| DNA polymerase I [Desulfarculus baarsii DSM 2075]
gi|301640754|gb|ADK86076.1| DNA polymerase I [Desulfarculus baarsii DSM 2075]
Length = 890
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
+Y A G FRH ++P+YK NRPP + L ++ + A+ + +E+
Sbjct: 59 VYDAKGPTFRHQIFPAYKANRPPMDPALKAQLPLVRQLVTALCLPAVEM 107
>gi|238785638|ref|ZP_04629616.1| DNA polymerase I [Yersinia bercovieri ATCC 43970]
gi|238713473|gb|EEQ05507.1| DNA polymerase I [Yersinia bercovieri ATCC 43970]
Length = 932
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|46201227|ref|ZP_00055515.2| COG0749: DNA polymerase I - 3'-5' exonuclease and polymerase
domains [Magnetospirillum magnetotacticum MS-1]
Length = 926
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FR +YP YK +RPP PD +V ++ + +A + IE+
Sbjct: 67 FRSEIYPEYKAHRPPAPDELVPQFPLVREATRAFDLPAIEL 107
>gi|444334877|ref|ZP_21150292.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype a
str. A160]
gi|443549787|gb|ELT58415.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype a
str. A160]
Length = 933
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 115
>gi|429732469|ref|ZP_19267079.1| DNA-directed DNA polymerase [Aggregatibacter actinomycetemcomitans
Y4]
gi|429155977|gb|EKX98619.1| DNA-directed DNA polymerase [Aggregatibacter actinomycetemcomitans
Y4]
Length = 933
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 115
>gi|77164079|ref|YP_342604.1| DNA polymerase A [Nitrosococcus oceani ATCC 19707]
gi|254436145|ref|ZP_05049652.1| DNA polymerase I superfamily [Nitrosococcus oceani AFC27]
gi|76882393|gb|ABA57074.1| DNA polymerase A [Nitrosococcus oceani ATCC 19707]
gi|207089256|gb|EDZ66528.1| DNA polymerase I superfamily [Nitrosococcus oceani AFC27]
Length = 903
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FRH L+ YK++RPP P+ + +Q L I+A+ + ++ V + D
Sbjct: 61 VFDAKGKTFRHELFEQYKDHRPPMPEELACQIQPLHDLIRALGLPLLCVKGVEAD 115
>gi|262163668|ref|ZP_06031409.1| DNA polymerase I [Vibrio mimicus VM223]
gi|262027884|gb|EEY46548.1| DNA polymerase I [Vibrio mimicus VM223]
Length = 890
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK NRPP PD + ++ L I+AM + ++ + + D
Sbjct: 17 IFDAKGKTFRDEMYDQYKANRPPMPDDLRCQVEPLHQVIRAMGLPLLAIEGVEAD 71
>gi|419357576|ref|ZP_13898820.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC13C]
gi|378195296|gb|EHX55795.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC13C]
Length = 928
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP P+ + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPNDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|419347639|ref|ZP_13889004.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC13A]
gi|419352100|ref|ZP_13893425.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC13B]
gi|419362546|ref|ZP_13903750.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC13D]
gi|419367692|ref|ZP_13908839.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC13E]
gi|378182038|gb|EHX42693.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC13A]
gi|378195438|gb|EHX55936.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC13B]
gi|378197868|gb|EHX58343.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC13D]
gi|378209426|gb|EHX69799.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC13E]
Length = 928
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP P+ + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPNDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|419229262|ref|ZP_13772098.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC9A]
gi|419251540|ref|ZP_13794105.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC9E]
gi|378068593|gb|EHW30691.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC9A]
gi|378089642|gb|EHW51484.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC9E]
Length = 928
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP P+ + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPNDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|419212384|ref|ZP_13755445.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC8C]
gi|378047856|gb|EHW10213.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC8C]
Length = 928
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP P+ + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPNDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|416068114|ref|ZP_11582638.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype f
str. D18P1]
gi|348001358|gb|EGY42106.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype f
str. D18P1]
Length = 933
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 115
>gi|336437052|ref|ZP_08616761.1| hypothetical protein HMPREF0988_02346 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336006186|gb|EGN36222.1| hypothetical protein HMPREF0988_02346 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 871
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 5 YGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGL 64
YG L F + Y+T +T DVH FRH +Y YK R P + + Q +
Sbjct: 36 YGFLNIMFKILDEEKPEYLT-VTFDVH------APTFRHEMYAEYKGTRKPMAEELRQQV 88
Query: 65 QYLKASIKAMSIKVIE 80
+K ++AM I IE
Sbjct: 89 PVIKEVLQAMRIATIE 104
>gi|416345290|ref|ZP_11678883.1| DNA polymerase I [Escherichia coli EC4100B]
gi|320198938|gb|EFW73536.1| DNA polymerase I [Escherichia coli EC4100B]
Length = 928
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP P+ + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPNDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|300925951|ref|ZP_07141783.1| DNA-directed DNA polymerase [Escherichia coli MS 182-1]
gi|300417979|gb|EFK01290.1| DNA-directed DNA polymerase [Escherichia coli MS 182-1]
Length = 928
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP P+ + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPNDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|387121098|ref|YP_006286981.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D7S-1]
gi|385875590|gb|AFI87149.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 933
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 115
>gi|260870580|ref|YP_003236982.1| DNA polymerase I [Escherichia coli O111:H- str. 11128]
gi|300906177|ref|ZP_07123891.1| DNA-directed DNA polymerase [Escherichia coli MS 84-1]
gi|301303329|ref|ZP_07209453.1| DNA-directed DNA polymerase [Escherichia coli MS 124-1]
gi|301328175|ref|ZP_07221307.1| DNA-directed DNA polymerase [Escherichia coli MS 78-1]
gi|415865198|ref|ZP_11538083.1| DNA-directed DNA polymerase [Escherichia coli MS 85-1]
gi|417202174|ref|ZP_12018424.1| DNA-directed DNA polymerase [Escherichia coli 4.0522]
gi|417208254|ref|ZP_12020273.1| DNA-directed DNA polymerase [Escherichia coli JB1-95]
gi|417594329|ref|ZP_12245015.1| DNA polymerase I [Escherichia coli 2534-86]
gi|417641881|ref|ZP_12292003.1| DNA polymerase I [Escherichia coli TX1999]
gi|418040246|ref|ZP_12678493.1| DNA-directed DNA polymerase [Escherichia coli W26]
gi|419172818|ref|ZP_13716688.1| DNA polymerase I [Escherichia coli DEC7A]
gi|419183380|ref|ZP_13726984.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC7C]
gi|419188994|ref|ZP_13732495.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC7D]
gi|419193930|ref|ZP_13737367.1| DNA polymerase I [Escherichia coli DEC7E]
gi|419199648|ref|ZP_13742934.1| DNA polymerase I [Escherichia coli DEC8A]
gi|419206032|ref|ZP_13749184.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC8B]
gi|419223963|ref|ZP_13766871.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC8E]
gi|419235133|ref|ZP_13777895.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC9B]
gi|419245961|ref|ZP_13788589.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC9D]
gi|419286565|ref|ZP_13828725.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC10F]
gi|419372413|ref|ZP_13913520.1| DNA polymerase I [Escherichia coli DEC14A]
gi|419377989|ref|ZP_13919002.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC14B]
gi|419383382|ref|ZP_13924320.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC14C]
gi|419388618|ref|ZP_13929481.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC14D]
gi|419891458|ref|ZP_14411543.1| DNA polymerase I [Escherichia coli O111:H8 str. CVM9570]
gi|419895921|ref|ZP_14415694.1| DNA polymerase I [Escherichia coli O111:H8 str. CVM9574]
gi|419947806|ref|ZP_14464121.1| DNA polymerase I [Escherichia coli CUMT8]
gi|420088854|ref|ZP_14600713.1| DNA polymerase I [Escherichia coli O111:H8 str. CVM9602]
gi|420097575|ref|ZP_14608871.1| DNA polymerase I [Escherichia coli O111:H8 str. CVM9634]
gi|420388222|ref|ZP_14887550.1| DNA polymerase I [Escherichia coli EPECa12]
gi|422963564|ref|ZP_16973178.1| DNA polymerase I [Escherichia coli H494]
gi|424768925|ref|ZP_18196163.1| DNA polymerase I [Escherichia coli O111:H8 str. CFSAN001632]
gi|427807054|ref|ZP_18974121.1| DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5'
exonuclease [Escherichia coli chi7122]
gi|427811643|ref|ZP_18978708.1| DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5'
exonuclease [Escherichia coli]
gi|432811606|ref|ZP_20045460.1| DNA polymerase I [Escherichia coli KTE101]
gi|432965621|ref|ZP_20154542.1| DNA polymerase I [Escherichia coli KTE203]
gi|433132438|ref|ZP_20317856.1| DNA polymerase I [Escherichia coli KTE163]
gi|433137110|ref|ZP_20322431.1| DNA polymerase I [Escherichia coli KTE166]
gi|443615339|ref|YP_007379195.1| DNA polymerase I [Escherichia coli APEC O78]
gi|450227601|ref|ZP_21897574.1| DNA polymerase I [Escherichia coli O08]
gi|257766936|dbj|BAI38431.1| DNA polymerase I [Escherichia coli O111:H- str. 11128]
gi|300402027|gb|EFJ85565.1| DNA-directed DNA polymerase [Escherichia coli MS 84-1]
gi|300841283|gb|EFK69043.1| DNA-directed DNA polymerase [Escherichia coli MS 124-1]
gi|300845357|gb|EFK73117.1| DNA-directed DNA polymerase [Escherichia coli MS 78-1]
gi|315254225|gb|EFU34193.1| DNA-directed DNA polymerase [Escherichia coli MS 85-1]
gi|345331436|gb|EGW63896.1| DNA polymerase I [Escherichia coli 2534-86]
gi|345389398|gb|EGX19203.1| DNA polymerase I [Escherichia coli TX1999]
gi|371591668|gb|EHN80611.1| DNA polymerase I [Escherichia coli H494]
gi|378009935|gb|EHV72883.1| DNA polymerase I [Escherichia coli DEC7A]
gi|378020776|gb|EHV83508.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC7C]
gi|378023768|gb|EHV86437.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC7D]
gi|378034351|gb|EHV96916.1| DNA polymerase I [Escherichia coli DEC7E]
gi|378042601|gb|EHW05048.1| DNA polymerase I [Escherichia coli DEC8A]
gi|378043089|gb|EHW05527.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC8B]
gi|378060496|gb|EHW22686.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC8E]
gi|378073037|gb|EHW35091.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC9B]
gi|378086299|gb|EHW48177.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC9D]
gi|378125461|gb|EHW86861.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC10F]
gi|378212873|gb|EHX73193.1| DNA polymerase I [Escherichia coli DEC14A]
gi|378214579|gb|EHX74885.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC14B]
gi|378223864|gb|EHX84074.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC14C]
gi|378227514|gb|EHX87685.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC14D]
gi|383476838|gb|EID68770.1| DNA-directed DNA polymerase [Escherichia coli W26]
gi|386187061|gb|EIH75884.1| DNA-directed DNA polymerase [Escherichia coli 4.0522]
gi|386196794|gb|EIH91007.1| DNA-directed DNA polymerase [Escherichia coli JB1-95]
gi|388349887|gb|EIL15319.1| DNA polymerase I [Escherichia coli O111:H8 str. CVM9570]
gi|388359645|gb|EIL23932.1| DNA polymerase I [Escherichia coli O111:H8 str. CVM9574]
gi|388422498|gb|EIL82076.1| DNA polymerase I [Escherichia coli CUMT8]
gi|391301185|gb|EIQ59083.1| DNA polymerase I [Escherichia coli EPECa12]
gi|394383854|gb|EJE61437.1| DNA polymerase I [Escherichia coli O111:H8 str. CVM9634]
gi|394389341|gb|EJE66487.1| DNA polymerase I [Escherichia coli O111:H8 str. CVM9602]
gi|412965236|emb|CCK49167.1| DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5'
exonuclease [Escherichia coli chi7122]
gi|412971822|emb|CCJ46488.1| DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5'
exonuclease [Escherichia coli]
gi|421944849|gb|EKU02089.1| DNA polymerase I [Escherichia coli O111:H8 str. CFSAN001632]
gi|431359458|gb|ELG46095.1| DNA polymerase I [Escherichia coli KTE101]
gi|431476197|gb|ELH55991.1| DNA polymerase I [Escherichia coli KTE203]
gi|431641856|gb|ELJ09589.1| DNA polymerase I [Escherichia coli KTE163]
gi|431652854|gb|ELJ19974.1| DNA polymerase I [Escherichia coli KTE166]
gi|443419847|gb|AGC84751.1| DNA polymerase I [Escherichia coli APEC O78]
gi|449313460|gb|EMD03669.1| DNA polymerase I [Escherichia coli O08]
Length = 928
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP P+ + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPNDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|260857738|ref|YP_003231629.1| DNA polymerase I [Escherichia coli O26:H11 str. 11368]
gi|415786131|ref|ZP_11493377.1| DNA polymerase I [Escherichia coli EPECa14]
gi|419257347|ref|ZP_13799845.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC10A]
gi|419269345|ref|ZP_13811687.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC10C]
gi|419876840|ref|ZP_14398510.1| DNA polymerase I [Escherichia coli O111:H11 str. CVM9534]
gi|419879979|ref|ZP_14401396.1| DNA polymerase I [Escherichia coli O111:H11 str. CVM9545]
gi|419904106|ref|ZP_14423113.1| DNA polymerase I [Escherichia coli O26:H11 str. CVM9942]
gi|419909427|ref|ZP_14428006.1| DNA polymerase I [Escherichia coli O26:H11 str. CVM10026]
gi|420111695|ref|ZP_14621518.1| DNA polymerase I [Escherichia coli O111:H11 str. CVM9553]
gi|420116411|ref|ZP_14625821.1| DNA polymerase I [Escherichia coli O26:H11 str. CVM10021]
gi|420122742|ref|ZP_14631652.1| DNA polymerase I [Escherichia coli O26:H11 str. CVM10030]
gi|420128758|ref|ZP_14637307.1| DNA polymerase I [Escherichia coli O26:H11 str. CVM10224]
gi|420134725|ref|ZP_14642827.1| DNA polymerase I [Escherichia coli O26:H11 str. CVM9952]
gi|424753467|ref|ZP_18181422.1| DNA polymerase I [Escherichia coli O26:H11 str. CFSAN001629]
gi|424759275|ref|ZP_18186943.1| DNA polymerase I [Escherichia coli O111:H11 str. CFSAN001630]
gi|257756387|dbj|BAI27889.1| DNA polymerase I [Escherichia coli O26:H11 str. 11368]
gi|323155157|gb|EFZ41344.1| DNA polymerase I [Escherichia coli EPECa14]
gi|378097212|gb|EHW58971.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC10A]
gi|378107116|gb|EHW68738.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Escherichia coli DEC10C]
gi|388342244|gb|EIL08291.1| DNA polymerase I [Escherichia coli O111:H11 str. CVM9534]
gi|388368261|gb|EIL31903.1| DNA polymerase I [Escherichia coli O26:H11 str. CVM9942]
gi|388370216|gb|EIL33756.1| DNA polymerase I [Escherichia coli O111:H11 str. CVM9545]
gi|388373169|gb|EIL36503.1| DNA polymerase I [Escherichia coli O26:H11 str. CVM10026]
gi|394384726|gb|EJE62281.1| DNA polymerase I [Escherichia coli O26:H11 str. CVM10224]
gi|394397973|gb|EJE74195.1| DNA polymerase I [Escherichia coli O111:H11 str. CVM9553]
gi|394403734|gb|EJE79273.1| DNA polymerase I [Escherichia coli O26:H11 str. CVM10021]
gi|394418394|gb|EJE92070.1| DNA polymerase I [Escherichia coli O26:H11 str. CVM10030]
gi|394421114|gb|EJE94603.1| DNA polymerase I [Escherichia coli O26:H11 str. CVM9952]
gi|421935239|gb|EKT92932.1| DNA polymerase I [Escherichia coli O26:H11 str. CFSAN001629]
gi|421947453|gb|EKU04527.1| DNA polymerase I [Escherichia coli O111:H11 str. CFSAN001630]
Length = 928
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP P+ + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPNDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|392543155|ref|ZP_10290292.1| DNA polymerase I [Pseudoalteromonas piscicida JCM 20779]
Length = 918
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK +RPP PD + ++ + IKAM + ++ ++ + D
Sbjct: 61 VFDAKGPTFRNEMYSEYKAHRPPMPDDLRTQIEPIHEIIKAMGLPLVSISGVEAD 115
>gi|365966721|ref|YP_004948283.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans ANH9381]
gi|365745634|gb|AEW76539.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans ANH9381]
Length = 933
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 115
>gi|415770541|ref|ZP_11484884.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D17P-2]
gi|348656714|gb|EGY74321.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D17P-2]
Length = 933
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 115
>gi|416074754|ref|ZP_11584683.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype b
str. SCC1398]
gi|444337963|ref|ZP_21151873.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype b
str. SCC4092]
gi|348006757|gb|EGY47152.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype b
str. SCC1398]
gi|443545907|gb|ELT55637.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype b
str. SCC4092]
Length = 933
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 115
>gi|261866908|ref|YP_003254830.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D11S-1]
gi|444345405|ref|ZP_21153423.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype c
str. AAS4A]
gi|261412240|gb|ACX81611.1| DNA polymerase I (POL I) [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|443542932|gb|ELT53212.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype c
str. AAS4A]
Length = 933
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 115
>gi|90408664|ref|ZP_01216816.1| DNA polymerase I [Psychromonas sp. CNPT3]
gi|90310240|gb|EAS38373.1| DNA polymerase I [Psychromonas sp. CNPT3]
Length = 936
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +Y YK NRP PD + ++ L A IKAM + ++ V
Sbjct: 61 VFDAKGKTFRDDMYSQYKANRPSMPDDLRIQIEPLHAVIKAMGLPILIV 109
>gi|238797621|ref|ZP_04641117.1| DNA polymerase I [Yersinia mollaretii ATCC 43969]
gi|238718485|gb|EEQ10305.1| DNA polymerase I [Yersinia mollaretii ATCC 43969]
Length = 932
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|339492245|ref|YP_004712538.1| DNA polymerase I [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338799617|gb|AEJ03449.1| DNA polymerase I [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 914
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + ++ L AS++A+ + ++ V + D
Sbjct: 58 VFDAKGPTFRDALFENYKSHRPPMPDDLRVQVEPLHASVRALGLPLLCVEGVEAD 112
>gi|386018775|ref|YP_005936799.1| DNA polymerase I [Pseudomonas stutzeri DSM 4166]
gi|327478747|gb|AEA82057.1| DNA polymerase I [Pseudomonas stutzeri DSM 4166]
Length = 914
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + ++ L AS++A+ + ++ V + D
Sbjct: 58 VFDAKGPTFRDALFENYKSHRPPMPDDLRVQVEPLHASVRALGLPLLCVEGVEAD 112
>gi|146280510|ref|YP_001170663.1| DNA polymerase I [Pseudomonas stutzeri A1501]
gi|145568715|gb|ABP77821.1| DNA polymerase I [Pseudomonas stutzeri A1501]
Length = 931
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + ++ L AS++A+ + ++ V + D
Sbjct: 75 VFDAKGPTFRDALFENYKSHRPPMPDDLRVQVEPLHASVRALGLPLLCVEGVEAD 129
>gi|416054127|ref|ZP_11579105.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype e
str. SCC393]
gi|348003777|gb|EGY44333.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype e
str. SCC393]
Length = 977
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 105 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 159
>gi|416031112|ref|ZP_11572398.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype a
str. H5P1]
gi|348002278|gb|EGY42982.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype a
str. H5P1]
Length = 962
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 90 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 144
>gi|188532189|ref|YP_001905986.1| DNA polymerase I [Erwinia tasmaniensis Et1/99]
gi|188027231|emb|CAO95070.1| DNA polymerase I [Erwinia tasmaniensis Et1/99]
Length = 929
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ ++ + D
Sbjct: 61 VFDAKGKTFRDELFEEYKSHRPPMPDELRAQIEPLHKMVKAMGLPLLAISGVEAD 115
>gi|218780589|ref|YP_002431907.1| DNA polymerase I [Desulfatibacillum alkenivorans AK-01]
gi|218761973|gb|ACL04439.1| DNA polymerase I [Desulfatibacillum alkenivorans AK-01]
Length = 889
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FRH +Y YK NRPP + + + Y+K +A ++ ++E+
Sbjct: 56 VFDAKGPTFRHEMYKDYKANRPPMDEALAVQIPYIKNVTEAFNMPMLEM 104
>gi|254228533|ref|ZP_04921958.1| DNA polymerase I [Vibrio sp. Ex25]
gi|262392691|ref|YP_003284545.1| DNA polymerase I [Vibrio sp. Ex25]
gi|151938915|gb|EDN57748.1| DNA polymerase I [Vibrio sp. Ex25]
gi|262336285|gb|ACY50080.1| DNA polymerase I [Vibrio sp. Ex25]
Length = 928
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +Y YK NRPP PD + ++ L I+AM + +I V
Sbjct: 61 VFDAKGKTFRDDMYAEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICV 109
>gi|444347338|ref|ZP_21155248.1| LOW QUALITY PROTEIN: DNA polymerase I [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|443548872|gb|ELT58000.1| LOW QUALITY PROTEIN: DNA polymerase I [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 966
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 95 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 149
>gi|397685261|ref|YP_006522580.1| DNA polymerase I [Pseudomonas stutzeri DSM 10701]
gi|395806817|gb|AFN76222.1| DNA polymerase I [Pseudomonas stutzeri DSM 10701]
Length = 914
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L AS++A+ + ++ V + D
Sbjct: 58 VFDAKGPTFRDELFAEYKSHRPPMPDDLRGQIEPLHASVRALGLPLLCVEGVEAD 112
>gi|416045430|ref|ZP_11575392.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype d
str. I63B]
gi|347995330|gb|EGY36518.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype d
str. I63B]
Length = 962
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 90 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 144
>gi|417320976|ref|ZP_12107516.1| DNA polymerase I [Vibrio parahaemolyticus 10329]
gi|328471656|gb|EGF42533.1| DNA polymerase I [Vibrio parahaemolyticus 10329]
Length = 930
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +Y YK NRPP PD + ++ L I+AM + +I V
Sbjct: 61 VFDAKGKTFRDEMYSEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICV 109
>gi|262281030|ref|ZP_06058813.1| DNA polymerase I [Acinetobacter calcoaceticus RUH2202]
gi|262257930|gb|EEY76665.1| DNA polymerase I [Acinetobacter calcoaceticus RUH2202]
Length = 923
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPSMPEELSQQIPYLHALIKAQGI 99
>gi|445439601|ref|ZP_21441726.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC021]
gi|444751833|gb|ELW76531.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC021]
Length = 923
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|433656420|ref|YP_007273799.1| DNA polymerase I [Vibrio parahaemolyticus BB22OP]
gi|432507108|gb|AGB08625.1| DNA polymerase I [Vibrio parahaemolyticus BB22OP]
Length = 931
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +Y YK NRPP PD + ++ L I+AM + +I V
Sbjct: 61 VFDAKGKTFRDEMYSEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICV 109
>gi|28896881|ref|NP_796486.1| DNA polymerase I [Vibrio parahaemolyticus RIMD 2210633]
gi|260365931|ref|ZP_05778425.1| DNA polymerase I family protein [Vibrio parahaemolyticus K5030]
gi|260877781|ref|ZP_05890136.1| DNA-directed DNA polymerase [Vibrio parahaemolyticus AN-5034]
gi|260895569|ref|ZP_05904065.1| DNA-directed DNA polymerase [Vibrio parahaemolyticus Peru-466]
gi|28805089|dbj|BAC58370.1| DNA polymerase I [Vibrio parahaemolyticus RIMD 2210633]
gi|308088487|gb|EFO38182.1| DNA-directed DNA polymerase [Vibrio parahaemolyticus Peru-466]
gi|308089919|gb|EFO39614.1| DNA-directed DNA polymerase [Vibrio parahaemolyticus AN-5034]
gi|308113417|gb|EFO50957.1| DNA polymerase I family protein [Vibrio parahaemolyticus K5030]
Length = 931
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +Y YK NRPP PD + ++ L I+AM + +I V
Sbjct: 61 VFDAKGKTFRDEMYSEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICV 109
>gi|424056862|ref|ZP_17794379.1| DNA polymerase I [Acinetobacter nosocomialis Ab22222]
gi|425741549|ref|ZP_18859694.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-487]
gi|407440395|gb|EKF46912.1| DNA polymerase I [Acinetobacter nosocomialis Ab22222]
gi|425492114|gb|EKU58384.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-487]
Length = 923
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|375137137|ref|YP_004997787.1| DNA polymerase I [Acinetobacter calcoaceticus PHEA-2]
gi|325124582|gb|ADY84105.1| DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5'
exonuclease [Acinetobacter calcoaceticus PHEA-2]
Length = 923
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|293610426|ref|ZP_06692727.1| DNA polymerase I [Acinetobacter sp. SH024]
gi|292827658|gb|EFF86022.1| DNA polymerase I [Acinetobacter sp. SH024]
Length = 923
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|451972454|ref|ZP_21925662.1| DNA polymerase I [Vibrio alginolyticus E0666]
gi|451931664|gb|EMD79350.1| DNA polymerase I [Vibrio alginolyticus E0666]
Length = 928
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +Y YK NRPP PD + ++ L I+AM + +I V
Sbjct: 61 VFDAKGKTFRDDMYAEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICV 109
>gi|260902594|ref|ZP_05910989.1| DNA polymerase I family protein [Vibrio parahaemolyticus AQ4037]
gi|308109599|gb|EFO47139.1| DNA polymerase I family protein [Vibrio parahaemolyticus AQ4037]
Length = 931
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +Y YK NRPP PD + ++ L I+AM + +I V
Sbjct: 61 VFDAKGKTFRDEMYSEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICV 109
>gi|113972232|ref|YP_736025.1| DNA polymerase I [Shewanella sp. MR-4]
gi|113886916|gb|ABI40968.1| DNA polymerase I [Shewanella sp. MR-4]
Length = 922
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR+ LY YK +RPP PD + ++ L I+A+ + +I +
Sbjct: 61 VFDAKGKTFRNDLYEEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISI 109
>gi|117922540|ref|YP_871732.1| DNA polymerase I [Shewanella sp. ANA-3]
gi|117614872|gb|ABK50326.1| DNA polymerase I [Shewanella sp. ANA-3]
Length = 922
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR+ LY YK +RPP PD + ++ L I+A+ + +I +
Sbjct: 61 VFDAKGKTFRNDLYEEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISI 109
>gi|152977709|ref|YP_001343338.1| DNA polymerase I [Actinobacillus succinogenes 130Z]
gi|150839432|gb|ABR73403.1| DNA polymerase I [Actinobacillus succinogenes 130Z]
Length = 956
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + + +Q L I+++ I ++ V + D
Sbjct: 61 VFDAKGKTFRDKLFEQYKSHRPPMPDDLRRQIQPLHDIIRSLGIPLLSVEGVEAD 115
>gi|260892910|ref|YP_003239007.1| DNA polymerase I [Ammonifex degensii KC4]
gi|260865051|gb|ACX52157.1| DNA polymerase I [Ammonifex degensii KC4]
Length = 868
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
FRH L +YK +RP TPD + Q +K + A+++ V+E
Sbjct: 66 FRHALAETYKAHRPATPDELRQQFNLIKEVLTALNVPVVE 105
>gi|114049481|ref|YP_740031.1| DNA polymerase I [Shewanella sp. MR-7]
gi|113890923|gb|ABI44974.1| DNA polymerase I [Shewanella sp. MR-7]
Length = 922
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR+ LY YK +RPP PD + ++ L I+A+ + +I +
Sbjct: 61 VFDAKGKTFRNDLYEEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISI 109
>gi|427424253|ref|ZP_18914387.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-136]
gi|425698993|gb|EKU68615.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-136]
Length = 923
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|424743264|ref|ZP_18171577.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-141]
gi|422943525|gb|EKU38541.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-141]
Length = 923
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|261210183|ref|ZP_05924480.1| DNA polymerase I [Vibrio sp. RC341]
gi|260840723|gb|EEX67272.1| DNA polymerase I [Vibrio sp. RC341]
Length = 938
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK NRPP PD + ++ L I+AM + ++ + + D
Sbjct: 61 IFDAKGKTFRDEMYDQYKANRPPMPDDLRCQVEPLHQVIRAMGLPLLAIEGVEAD 115
>gi|299771514|ref|YP_003733540.1| DNA polymerase I(POL I) [Acinetobacter oleivorans DR1]
gi|298701602|gb|ADI92167.1| DNA polymerase I(POL I) [Acinetobacter oleivorans DR1]
Length = 923
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|260551921|ref|ZP_05825783.1| DNA polymerase I (POL I) [Acinetobacter sp. RUH2624]
gi|260405324|gb|EEW98819.1| DNA polymerase I (POL I) [Acinetobacter sp. RUH2624]
Length = 923
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|126640679|ref|YP_001083663.1| DNA polymerase I [Acinetobacter baumannii ATCC 17978]
Length = 879
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 20 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 55
>gi|91224944|ref|ZP_01260203.1| DNA polymerase I [Vibrio alginolyticus 12G01]
gi|269964579|ref|ZP_06178818.1| DNA polymerase I [Vibrio alginolyticus 40B]
gi|91190190|gb|EAS76460.1| DNA polymerase I [Vibrio alginolyticus 12G01]
gi|269830706|gb|EEZ84926.1| DNA polymerase I [Vibrio alginolyticus 40B]
Length = 928
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR +Y YK NRPP PD + ++ L I+AM + +I V
Sbjct: 61 VFDAKGKTFRDDMYAEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICV 109
>gi|350563876|ref|ZP_08932696.1| DNA polymerase I [Thioalkalimicrobium aerophilum AL3]
gi|349778397|gb|EGZ32753.1| DNA polymerase I [Thioalkalimicrobium aerophilum AL3]
Length = 933
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 20 DTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
+TY + V D A G FR+ LYP YK +RPP PD + ++ + +KA+ + ++
Sbjct: 51 ETYQPEFMAVVFD---AKGKTFRNDLYPEYKAHRPPMPDDLRVQIEPIHQIVKALGLPLL 107
Query: 80 EVNVMYED 87
+ + D
Sbjct: 108 VIEGVEAD 115
>gi|271502639|ref|YP_003335665.1| DNA polymerase I [Dickeya dadantii Ech586]
gi|270346194|gb|ACZ78959.1| DNA polymerase I [Dickeya dadantii Ech586]
Length = 929
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDDLFEHYKSHRPPMPDDLRAQIEPLHRMVKAMGLPLLSVSGVEAD 115
>gi|262404847|ref|ZP_06081401.1| DNA polymerase I [Vibrio sp. RC586]
gi|262348931|gb|EEY98070.1| DNA polymerase I [Vibrio sp. RC586]
Length = 938
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK NRPP PD + ++ L I+AM + ++ + + D
Sbjct: 61 IFDAKGKTFRDEMYDQYKANRPPMPDDLRCQVEPLHQVIRAMGLPLLAIEGVEAD 115
>gi|238794563|ref|ZP_04638171.1| DNA polymerase I [Yersinia intermedia ATCC 29909]
gi|238726143|gb|EEQ17689.1| DNA polymerase I [Yersinia intermedia ATCC 29909]
Length = 932
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|445400238|ref|ZP_21429888.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-57]
gi|444783620|gb|ELX07479.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-57]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|445486330|ref|ZP_21457388.1| DNA-directed DNA polymerase [Acinetobacter baumannii AA-014]
gi|444769815|gb|ELW93983.1| DNA-directed DNA polymerase [Acinetobacter baumannii AA-014]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|445451412|ref|ZP_21444765.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-A-92]
gi|444755083|gb|ELW79676.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-A-92]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|421789473|ref|ZP_16225731.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-82]
gi|410398604|gb|EKP50815.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-82]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|421662129|ref|ZP_16102297.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC110]
gi|408714932|gb|EKL60062.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC110]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|421625650|ref|ZP_16066496.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC098]
gi|421807914|ref|ZP_16243771.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC035]
gi|408697744|gb|EKL43250.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC098]
gi|410416093|gb|EKP67868.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC035]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|421656345|ref|ZP_16096653.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-72]
gi|408505734|gb|EKK07453.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-72]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|421702341|ref|ZP_16141825.1| DNA polymerase I [Acinetobacter baumannii ZWS1122]
gi|421706080|ref|ZP_16145500.1| DNA polymerase I [Acinetobacter baumannii ZWS1219]
gi|407194513|gb|EKE65653.1| DNA polymerase I [Acinetobacter baumannii ZWS1122]
gi|407194715|gb|EKE65852.1| DNA polymerase I [Acinetobacter baumannii ZWS1219]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|421693829|ref|ZP_16133461.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-692]
gi|404569668|gb|EKA74753.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-692]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|421675960|ref|ZP_16115879.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC065]
gi|421692418|ref|ZP_16132069.1| DNA-directed DNA polymerase [Acinetobacter baumannii IS-116]
gi|404559704|gb|EKA64955.1| DNA-directed DNA polymerase [Acinetobacter baumannii IS-116]
gi|410381477|gb|EKP34043.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC065]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|403675881|ref|ZP_10937984.1| DNA polymerase I [Acinetobacter sp. NCTC 10304]
Length = 918
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|417546460|ref|ZP_12197546.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC032]
gi|421666440|ref|ZP_16106532.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC087]
gi|421670844|ref|ZP_16110826.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC099]
gi|400384348|gb|EJP43026.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC032]
gi|410383141|gb|EKP35674.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC099]
gi|410388365|gb|EKP40804.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC087]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|417553708|ref|ZP_12204777.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-81]
gi|417561080|ref|ZP_12211959.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC137]
gi|421201546|ref|ZP_15658705.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC109]
gi|421454324|ref|ZP_15903673.1| DNA-directed DNA polymerase [Acinetobacter baumannii IS-123]
gi|421634261|ref|ZP_16074880.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-13]
gi|421805731|ref|ZP_16241607.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-A-694]
gi|395523662|gb|EJG11751.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC137]
gi|395563578|gb|EJG25231.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC109]
gi|400213091|gb|EJO44048.1| DNA-directed DNA polymerase [Acinetobacter baumannii IS-123]
gi|400390125|gb|EJP57172.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-81]
gi|408704979|gb|EKL50335.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-13]
gi|410407993|gb|EKP59968.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-A-694]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|244539444|dbj|BAH83487.1| DNA polymerase I [Candidatus Ishikawaella capsulata Mpkobe]
Length = 296
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 1 MGESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
+GE G ++ G L + TY T + V ++ G NFR+TL+ YK+NR P+ +
Sbjct: 28 LGEPTGAIY-GMLQMIKKLLTYYTPNHMAV--IFDETGDNFRNTLFKPYKSNRKIMPEKL 84
Query: 61 VQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
+ + L IKAM V+ V NV +D G
Sbjct: 85 KEQINPLYNIIKAMGFMVLSVANVEADDVIG 115
>gi|262172869|ref|ZP_06040547.1| DNA polymerase I [Vibrio mimicus MB-451]
gi|261893945|gb|EEY39931.1| DNA polymerase I [Vibrio mimicus MB-451]
Length = 938
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK NRPP PD + ++ L I+AM + ++ + + D
Sbjct: 61 IFDAKGKTFRDEMYDQYKANRPPMPDDLRCQVEPLHQVIRAMGLPLLAIEGVEAD 115
>gi|260556039|ref|ZP_05828258.1| DNA polymerase I [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|260410094|gb|EEX03393.1| DNA polymerase I [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|452955870|gb|EME61267.1| DNA polymerase I [Acinetobacter baumannii MSP4-16]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|239500679|ref|ZP_04659989.1| DNA polymerase I(POL I) [Acinetobacter baumannii AB900]
gi|421677461|ref|ZP_16117353.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC111]
gi|410393217|gb|EKP45571.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC111]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|213156072|ref|YP_002318117.1| DNA polymerase I [Acinetobacter baumannii AB0057]
gi|301344695|ref|ZP_07225436.1| DNA polymerase I [Acinetobacter baumannii AB056]
gi|301595519|ref|ZP_07240527.1| DNA polymerase I [Acinetobacter baumannii AB059]
gi|417574285|ref|ZP_12225139.1| DNA-directed DNA polymerase [Acinetobacter baumannii Canada BC-5]
gi|421798637|ref|ZP_16234653.1| DNA-directed DNA polymerase [Acinetobacter baumannii Canada BC1]
gi|213055232|gb|ACJ40134.1| DNA polymerase I [Acinetobacter baumannii AB0057]
gi|400209853|gb|EJO40823.1| DNA-directed DNA polymerase [Acinetobacter baumannii Canada BC-5]
gi|410412078|gb|EKP63938.1| DNA-directed DNA polymerase [Acinetobacter baumannii Canada BC1]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|193076392|gb|ABO11061.2| DNA polymerase I [Acinetobacter baumannii ATCC 17978]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|184156936|ref|YP_001845275.1| DNA polymerase I [Acinetobacter baumannii ACICU]
gi|332873987|ref|ZP_08441922.1| DNA-directed DNA polymerase [Acinetobacter baumannii 6014059]
gi|384130612|ref|YP_005513224.1| DNA polymerase I [Acinetobacter baumannii 1656-2]
gi|384141895|ref|YP_005524605.1| DNA polymerase I [Acinetobacter baumannii MDR-ZJ06]
gi|385236204|ref|YP_005797543.1| DNA polymerase I [Acinetobacter baumannii TCDC-AB0715]
gi|387125150|ref|YP_006291032.1| DNA polymerase I [Acinetobacter baumannii MDR-TJ]
gi|407931540|ref|YP_006847183.1| DNA polymerase I [Acinetobacter baumannii TYTH-1]
gi|416146713|ref|ZP_11601376.1| DNA polymerase I [Acinetobacter baumannii AB210]
gi|417571333|ref|ZP_12222190.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC189]
gi|417577222|ref|ZP_12228067.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-17]
gi|417871247|ref|ZP_12516190.1| DNA polymerase I [Acinetobacter baumannii ABNIH1]
gi|417875917|ref|ZP_12520717.1| DNA polymerase I [Acinetobacter baumannii ABNIH2]
gi|417879589|ref|ZP_12524146.1| DNA polymerase I [Acinetobacter baumannii ABNIH3]
gi|417882323|ref|ZP_12526625.1| DNA polymerase I [Acinetobacter baumannii ABNIH4]
gi|421201752|ref|ZP_15658907.1| DNA polymerase I [Acinetobacter baumannii AC12]
gi|421535322|ref|ZP_15981584.1| DNA polymerase I [Acinetobacter baumannii AC30]
gi|421631315|ref|ZP_16072000.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC180]
gi|421688457|ref|ZP_16128157.1| DNA-directed DNA polymerase [Acinetobacter baumannii IS-143]
gi|421791458|ref|ZP_16227634.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-2]
gi|424053635|ref|ZP_17791166.1| DNA polymerase I [Acinetobacter baumannii Ab11111]
gi|424064572|ref|ZP_17802056.1| DNA polymerase I [Acinetobacter baumannii Ab44444]
gi|425753804|ref|ZP_18871672.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-113]
gi|445465206|ref|ZP_21449984.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC338]
gi|445481479|ref|ZP_21455923.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-78]
gi|183208530|gb|ACC55928.1| DNA polymerase I - 3'-5' exonuclease and polymerase domains
[Acinetobacter baumannii ACICU]
gi|322506832|gb|ADX02286.1| DNA polymerase I [Acinetobacter baumannii 1656-2]
gi|323516701|gb|ADX91082.1| DNA polymerase I [Acinetobacter baumannii TCDC-AB0715]
gi|332737728|gb|EGJ68620.1| DNA-directed DNA polymerase [Acinetobacter baumannii 6014059]
gi|333366094|gb|EGK48108.1| DNA polymerase I [Acinetobacter baumannii AB210]
gi|342224533|gb|EGT89563.1| DNA polymerase I [Acinetobacter baumannii ABNIH2]
gi|342226068|gb|EGT91044.1| DNA polymerase I [Acinetobacter baumannii ABNIH1]
gi|342227687|gb|EGT92600.1| DNA polymerase I [Acinetobacter baumannii ABNIH3]
gi|342238064|gb|EGU02506.1| DNA polymerase I [Acinetobacter baumannii ABNIH4]
gi|347592388|gb|AEP05109.1| DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5'
exonuclease [Acinetobacter baumannii MDR-ZJ06]
gi|385879642|gb|AFI96737.1| DNA polymerase I [Acinetobacter baumannii MDR-TJ]
gi|395551781|gb|EJG17790.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC189]
gi|395570443|gb|EJG31105.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-17]
gi|398328637|gb|EJN44760.1| DNA polymerase I [Acinetobacter baumannii AC12]
gi|404561200|gb|EKA66436.1| DNA-directed DNA polymerase [Acinetobacter baumannii IS-143]
gi|404667121|gb|EKB35042.1| DNA polymerase I [Acinetobacter baumannii Ab11111]
gi|404672655|gb|EKB40459.1| DNA polymerase I [Acinetobacter baumannii Ab44444]
gi|407900121|gb|AFU36952.1| DNA polymerase I [Acinetobacter baumannii TYTH-1]
gi|408694637|gb|EKL40203.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC180]
gi|409986875|gb|EKO43066.1| DNA polymerase I [Acinetobacter baumannii AC30]
gi|410402963|gb|EKP55066.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-2]
gi|425497698|gb|EKU63803.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-113]
gi|444770271|gb|ELW94428.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-78]
gi|444779338|gb|ELX03332.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC338]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|169634321|ref|YP_001708057.1| DNA polymerase I [Acinetobacter baumannii SDF]
gi|169153113|emb|CAP02187.1| DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5'
exonuclease [Acinetobacter baumannii]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|169797137|ref|YP_001714930.1| DNA polymerase I [Acinetobacter baumannii AYE]
gi|215484600|ref|YP_002326835.1| DNA polymerase I(POL I) [Acinetobacter baumannii AB307-0294]
gi|301510197|ref|ZP_07235434.1| DNA polymerase I(POL I) [Acinetobacter baumannii AB058]
gi|332856876|ref|ZP_08436285.1| DNA-directed DNA polymerase [Acinetobacter baumannii 6013150]
gi|332867222|ref|ZP_08437487.1| DNA-directed DNA polymerase [Acinetobacter baumannii 6013113]
gi|417548876|ref|ZP_12199957.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-18]
gi|417565676|ref|ZP_12216550.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC143]
gi|421622234|ref|ZP_16063141.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC074]
gi|421642866|ref|ZP_16083377.1| DNA-directed DNA polymerase [Acinetobacter baumannii IS-235]
gi|421645644|ref|ZP_16086108.1| DNA-directed DNA polymerase [Acinetobacter baumannii IS-251]
gi|421651961|ref|ZP_16092326.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC0162]
gi|421657744|ref|ZP_16097992.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-83]
gi|421701238|ref|ZP_16140744.1| DNA-directed DNA polymerase [Acinetobacter baumannii IS-58]
gi|421796226|ref|ZP_16232293.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-21]
gi|424061103|ref|ZP_17798593.1| DNA polymerase I [Acinetobacter baumannii Ab33333]
gi|425747289|ref|ZP_18865299.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-348]
gi|445459622|ref|ZP_21447645.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC047]
gi|169150064|emb|CAM87958.1| DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5'
exonuclease [Acinetobacter baumannii AYE]
gi|213987981|gb|ACJ58280.1| DNA polymerase I(POL I) [Acinetobacter baumannii AB307-0294]
gi|332726930|gb|EGJ58435.1| DNA-directed DNA polymerase [Acinetobacter baumannii 6013150]
gi|332734161|gb|EGJ65293.1| DNA-directed DNA polymerase [Acinetobacter baumannii 6013113]
gi|395557432|gb|EJG23433.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC143]
gi|400389175|gb|EJP52247.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-18]
gi|404567840|gb|EKA72955.1| DNA-directed DNA polymerase [Acinetobacter baumannii IS-58]
gi|404666785|gb|EKB34715.1| DNA polymerase I [Acinetobacter baumannii Ab33333]
gi|408507082|gb|EKK08784.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC0162]
gi|408511432|gb|EKK13080.1| DNA-directed DNA polymerase [Acinetobacter baumannii IS-235]
gi|408518272|gb|EKK19798.1| DNA-directed DNA polymerase [Acinetobacter baumannii IS-251]
gi|408696290|gb|EKL41832.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC074]
gi|408711533|gb|EKL56738.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-83]
gi|410399741|gb|EKP51925.1| DNA-directed DNA polymerase [Acinetobacter baumannii Naval-21]
gi|425494177|gb|EKU60392.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-348]
gi|444773816|gb|ELW97907.1| DNA-directed DNA polymerase [Acinetobacter baumannii OIFC047]
Length = 923
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A IKA I
Sbjct: 64 FRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGI 99
>gi|422015986|ref|ZP_16362576.1| DNA polymerase I [Providencia burhodogranariea DSM 19968]
gi|414095433|gb|EKT57095.1| DNA polymerase I [Providencia burhodogranariea DSM 19968]
Length = 930
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ SYK++RPP PD + + + L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFESYKSHRPPMPDDLREQIAPLHEMVEAMGLPLLVVSGVEAD 115
>gi|424810745|ref|ZP_18236086.1| DNA polymerase I [Vibrio mimicus SX-4]
gi|342322117|gb|EGU17911.1| DNA polymerase I [Vibrio mimicus SX-4]
Length = 943
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK NRPP PD + ++ L I+AM + ++ + + D
Sbjct: 66 IFDAKGKTFRDEMYDQYKANRPPMPDDLRCQVEPLHQVIRAMGLPLLAIEGVEAD 120
>gi|332159647|ref|YP_004296224.1| DNA polymerase I [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325663877|gb|ADZ40521.1| DNA polymerase I [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 932
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|258623132|ref|ZP_05718144.1| DNA polymerase I [Vibrio mimicus VM573]
gi|258584615|gb|EEW09352.1| DNA polymerase I [Vibrio mimicus VM573]
Length = 938
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK NRPP PD + ++ L I+AM + ++ + + D
Sbjct: 61 IFDAKGKTFRDEMYDQYKANRPPMPDDLRCQVEPLHQVIRAMGLPLLAIEGVEAD 115
>gi|258626622|ref|ZP_05721452.1| DNA polymerase I [Vibrio mimicus VM603]
gi|258581126|gb|EEW06045.1| DNA polymerase I [Vibrio mimicus VM603]
Length = 938
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK NRPP PD + ++ L I+AM + ++ + + D
Sbjct: 61 IFDAKGKTFRDEMYDQYKANRPPMPDDLRCQVEPLHQVIRAMGLPLLAIEGVEAD 115
>gi|392407763|ref|YP_006444371.1| DNA polymerase I family protein [Anaerobaculum mobile DSM 13181]
gi|390620899|gb|AFM22046.1| DNA polymerase I family protein with 3'-5'-exonuclease and
polymerase domains [Anaerobaculum mobile DSM 13181]
Length = 854
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
+ A G FRH Y YK NRPP P+ + +K +K VIE+ + D
Sbjct: 58 FFDAKGETFRHEAYKEYKENRPPAPEEFKSQIFIIKELMKRFGYPVIEIEGVEAD 112
>gi|166031749|ref|ZP_02234578.1| hypothetical protein DORFOR_01450 [Dorea formicigenerans ATCC
27755]
gi|166028202|gb|EDR46959.1| DNA-directed DNA polymerase [Dorea formicigenerans ATCC 27755]
Length = 875
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 5 YGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGL 64
YG L F + Y+T + DVH FRH +Y +YK R P D + Q +
Sbjct: 40 YGFLTIMFKILDEEKPDYLT-VAFDVH------APTFRHKMYDAYKGTRKPMADELRQQV 92
Query: 65 QYLKASIKAMSIKVIE 80
+K + +M IK IE
Sbjct: 93 PVIKEVLCSMGIKTIE 108
>gi|449145679|ref|ZP_21776481.1| DNA polymerase I [Vibrio mimicus CAIM 602]
gi|449078712|gb|EMB49644.1| DNA polymerase I [Vibrio mimicus CAIM 602]
Length = 938
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK NRPP PD + ++ L I+AM + ++ + + D
Sbjct: 61 IFDAKGKTFRDEMYDQYKANRPPMPDDLRCQVEPLHQVIRAMGLPLLAIEGVEAD 115
>gi|386310384|ref|YP_006006440.1| DNA polymerase I [Yersinia enterocolitica subsp. palearctica Y11]
gi|418243097|ref|ZP_12869591.1| DNA polymerase I [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433548771|ref|ZP_20504819.1| DNA polymerase I [Yersinia enterocolitica IP 10393]
gi|318603742|emb|CBY25240.1| DNA polymerase I [Yersinia enterocolitica subsp. palearctica Y11]
gi|351777459|gb|EHB19671.1| DNA polymerase I [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431790285|emb|CCO67859.1| DNA polymerase I [Yersinia enterocolitica IP 10393]
Length = 932
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|262374328|ref|ZP_06067604.1| DNA polymerase I [Acinetobacter junii SH205]
gi|262310886|gb|EEY91974.1| DNA polymerase I [Acinetobacter junii SH205]
Length = 921
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + + + YL A IKA+ I
Sbjct: 64 FRHKLSPIYKGDRPSMPEELSEQIPYLHALIKALGI 99
>gi|254784333|ref|YP_003071761.1| DNA polymerase I [Teredinibacter turnerae T7901]
gi|237686342|gb|ACR13606.1| DNA polymerase I [Teredinibacter turnerae T7901]
Length = 908
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK NRPP PD + ++ L I+AM + ++ V + D
Sbjct: 58 VFDAKGKTFRDDMYKDYKANRPPMPDDLRSQVEPLHELIRAMGLPLLIVEGVEAD 112
>gi|238764290|ref|ZP_04625241.1| DNA polymerase I [Yersinia kristensenii ATCC 33638]
gi|238697441|gb|EEP90207.1| DNA polymerase I [Yersinia kristensenii ATCC 33638]
Length = 932
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|123440424|ref|YP_001004418.1| DNA polymerase I [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|420260959|ref|ZP_14763621.1| DNA polymerase I [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|122087385|emb|CAL10166.1| DNA polymerase I [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|404511594|gb|EKA25467.1| DNA polymerase I [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 932
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|238790750|ref|ZP_04634510.1| DNA polymerase I [Yersinia frederiksenii ATCC 33641]
gi|238721148|gb|EEQ12828.1| DNA polymerase I [Yersinia frederiksenii ATCC 33641]
Length = 932
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|402819958|ref|ZP_10869525.1| DNA polymerase I superfamily protein [alpha proteobacterium
IMCC14465]
gi|402510701|gb|EJW20963.1| DNA polymerase I superfamily protein [alpha proteobacterium
IMCC14465]
Length = 951
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR+ +YP YK NR P+ +V ++ ++KA I +E+
Sbjct: 66 IFDASGKTFRNDIYPEYKANRDAPPEDLVPQFPLVREAVKAFGIPSVEL 114
>gi|416083777|ref|ZP_11586899.1| LOW QUALITY PROTEIN: DNA polymerase I [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|348010514|gb|EGY50552.1| LOW QUALITY PROTEIN: DNA polymerase I [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
Length = 381
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 90 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 144
>gi|346306396|ref|ZP_08848554.1| hypothetical protein HMPREF9457_00263 [Dorea formicigenerans
4_6_53AFAA]
gi|345900201|gb|EGX70029.1| hypothetical protein HMPREF9457_00263 [Dorea formicigenerans
4_6_53AFAA]
Length = 875
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 5 YGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGL 64
YG L F + Y+T + DVH FRH +Y +YK R P D + Q +
Sbjct: 40 YGFLTIMFKILDEEKPDYLT-VAFDVH------APTFRHKMYDAYKGTRKPMADELRQQV 92
Query: 65 QYLKASIKAMSIKVIE 80
+K + +M IK IE
Sbjct: 93 PVIKEVLCSMGIKTIE 108
>gi|339326741|ref|YP_004686434.1| DNA polymerase I [Cupriavidus necator N-1]
gi|338166898|gb|AEI77953.1| DNA polymerase I [Cupriavidus necator N-1]
Length = 938
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR +YP+YK +RP P+ + + ++ + +++AM ++ V+ + D
Sbjct: 56 YSACVFDAKGKTFRDDMYPAYKEHRPSMPEDLARQIEPIHEAVRAMGWPIVVVDGVEAD 114
>gi|113868699|ref|YP_727188.1| DNA polymerase I [Ralstonia eutropha H16]
gi|113527475|emb|CAJ93820.1| DNA polymerase I [Ralstonia eutropha H16]
Length = 938
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR +YP+YK +RP P+ + + ++ + +++AM ++ V+ + D
Sbjct: 56 YSACVFDAKGKTFRDDMYPAYKEHRPSMPEDLARQIEPIHEAVRAMGWPIVVVDGVEAD 114
>gi|374598916|ref|ZP_09671918.1| DNA polymerase I [Myroides odoratus DSM 2801]
gi|423322892|ref|ZP_17300734.1| DNA polymerase I [Myroides odoratimimus CIP 103059]
gi|373910386|gb|EHQ42235.1| DNA polymerase I [Myroides odoratus DSM 2801]
gi|404610119|gb|EKB09475.1| DNA polymerase I [Myroides odoratimimus CIP 103059]
Length = 935
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G R ++P YK NR TP+ I + Y+K +KAM I +IEV+
Sbjct: 66 GSKDRLAIFPEYKANRDVTPEAIKIAVPYIKEILKAMHIPIIEVS 110
>gi|416108059|ref|ZP_11590897.1| LOW QUALITY PROTEIN: DNA polymerase I [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348004683|gb|EGY45181.1| LOW QUALITY PROTEIN: DNA polymerase I [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
Length = 431
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V+ + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVDGVEAD 115
>gi|317050146|ref|YP_004117794.1| DNA polymerase I [Pantoea sp. At-9b]
gi|316951763|gb|ADU71238.1| DNA polymerase I [Pantoea sp. At-9b]
Length = 928
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHEMVKAMGLPLLAVTGVEAD 115
>gi|386743146|ref|YP_006216325.1| DNA polymerase I [Providencia stuartii MRSN 2154]
gi|384479839|gb|AFH93634.1| DNA polymerase I [Providencia stuartii MRSN 2154]
Length = 930
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ SYK++RPP PD + + + L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFESYKSHRPPMPDDLREQIAPLHEMVEAMGLPLLVVSGVEAD 115
>gi|359786182|ref|ZP_09289321.1| DNA polymerase I [Halomonas sp. GFAJ-1]
gi|359296551|gb|EHK60800.1| DNA polymerase I [Halomonas sp. GFAJ-1]
Length = 926
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +Y YK +RPP PD + ++ L A +KA+ + ++
Sbjct: 58 VFDAPGKTFRDEMYSEYKAHRPPMPDELRSQIKPLHACVKALGLPLL 104
>gi|307128781|ref|YP_003880797.1| DNA polymerase I [Dickeya dadantii 3937]
gi|306526310|gb|ADM96240.1| DNA polymerase I [Dickeya dadantii 3937]
Length = 944
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDDLFEHYKSHRPPMPDDLRAQIEPLHRMVKAMGLPLLSVSGVEAD 115
>gi|220904332|ref|YP_002479644.1| DNA polymerase I [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
gi|219868631|gb|ACL48966.1| DNA polymerase I [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
Length = 921
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKV 78
G NFRH ++P YK NR TP+ +V+ +Q ++ + A+ + +
Sbjct: 71 GKNFRHDIFPLYKANRDATPEDLVRQMQPIERMVTALGMNL 111
>gi|183597070|ref|ZP_02958563.1| hypothetical protein PROSTU_00309 [Providencia stuartii ATCC 25827]
gi|188023732|gb|EDU61772.1| DNA-directed DNA polymerase [Providencia stuartii ATCC 25827]
Length = 930
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ SYK++RPP PD + + + L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFESYKSHRPPMPDDLREQIAPLHEMVEAMGLPLLVVSGVEAD 115
>gi|24376141|ref|NP_720184.1| DNA polymerase I PolA [Shewanella oneidensis MR-1]
gi|24351181|gb|AAN57628.1| DNA polymerase I PolA [Shewanella oneidensis MR-1]
Length = 922
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR+ LY YK +RPP PD + ++ L I+A+ + +I +
Sbjct: 61 VFDAKGKTFRNDLYQEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISI 109
>gi|285017276|ref|YP_003374987.1| exonuclease [Xanthomonas albilineans GPE PC73]
gi|283472494|emb|CBA14999.1| putative exonuclease protein [Xanthomonas albilineans GPE PC73]
Length = 307
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
FRH LYP+YK NR P PD + + + +A A+ + V+
Sbjct: 73 FRHRLYPAYKANRAPAPDALRRQFAHCQALCAALGLCVL 111
>gi|145347581|ref|XP_001418242.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578471|gb|ABO96535.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 233
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
A G FRH ++ YK NRPPTP+ +++ + ++ ++ M + ++ ++ + D
Sbjct: 61 AKGKTFRHEMFVEYKANRPPTPEPLLELIPKVEQLVRDMGVPLLRLSGVEAD 112
>gi|373449816|ref|ZP_09541914.1| DNA polymerase I [Wolbachia pipientis wAlbB]
gi|371932982|emb|CCE76900.1| DNA polymerase I [Wolbachia pipientis wAlbB]
Length = 842
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 1 MGESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
+G YG L L Y I H Y+T I LD + NFRH+LY YK NR P+ +
Sbjct: 33 VGAVYGFL-NMILKY-ISHSDYLT-IALD------SGKKNFRHSLYSEYKANRVTPPEDL 83
Query: 61 VQGLQYLKASIKAMSIKVIEV 81
+ L+ +++A + E+
Sbjct: 84 IPQFTILREAVEAFNFSYEEI 104
>gi|383192259|ref|YP_005202387.1| DNA polymerase I [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|371590517|gb|AEX54247.1| DNA polymerase I [Rahnella aquatilis CIP 78.65 = ATCC 33071]
Length = 930
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|322835075|ref|YP_004215102.1| DNA polymerase I [Rahnella sp. Y9602]
gi|321170276|gb|ADW75975.1| DNA polymerase I [Rahnella sp. Y9602]
Length = 934
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEQYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|300021892|ref|YP_003754503.1| DNA polymerase I [Hyphomicrobium denitrificans ATCC 51888]
gi|299523713|gb|ADJ22182.1| DNA polymerase I [Hyphomicrobium denitrificans ATCC 51888]
Length = 995
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 30/50 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
++ A FR+ +YP YK RPP P+ ++ ++ +++A ++ +E++
Sbjct: 87 IFDAGRETFRNQIYPQYKAQRPPPPEELIPQFPLIRDAVRAFNVACVELD 136
>gi|74318471|ref|YP_316211.1| DNA polymerase I [Thiobacillus denitrificans ATCC 25259]
gi|74057966|gb|AAZ98406.1| DNA polymerase A [Thiobacillus denitrificans ATCC 25259]
Length = 907
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKA 73
++ A G FR LYP+YK NRP PD + ++ L +I+A
Sbjct: 65 VFDAKGKTFRDDLYPAYKANRPAMPDDLRSQIEPLHEAIRA 105
>gi|238759874|ref|ZP_04621030.1| DNA polymerase I [Yersinia aldovae ATCC 35236]
gi|238701935|gb|EEP94496.1| DNA polymerase I [Yersinia aldovae ATCC 35236]
Length = 932
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|16272796|ref|NP_439016.1| DNA polymerase I [Haemophilus influenzae Rd KW20]
gi|260579947|ref|ZP_05847777.1| DNA-directed DNA polymerase I [Haemophilus influenzae RdAW]
gi|1169402|sp|P43741.1|DPO1_HAEIN RecName: Full=DNA polymerase I; Short=POL I
gi|1573871|gb|AAC22515.1| DNA polymerase I (polA) [Haemophilus influenzae Rd KW20]
gi|260093231|gb|EEW77164.1| DNA-directed DNA polymerase I [Haemophilus influenzae RdAW]
Length = 930
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|381165954|ref|ZP_09875173.1| DNA polymerase I (POL I) [Phaeospirillum molischianum DSM 120]
gi|380684938|emb|CCG39985.1| DNA polymerase I (POL I) [Phaeospirillum molischianum DSM 120]
Length = 936
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FR LYP YK RPP P+ +V ++ +++A + IE+
Sbjct: 75 FRTDLYPGYKAQRPPPPEELVPQFPLVREAVRAFDVACIEM 115
>gi|329122862|ref|ZP_08251434.1| DNA-directed DNA polymerase I [Haemophilus aegyptius ATCC 11116]
gi|327472126|gb|EGF17564.1| DNA-directed DNA polymerase I [Haemophilus aegyptius ATCC 11116]
Length = 930
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|260581683|ref|ZP_05849480.1| DNA polymerase I [Haemophilus influenzae NT127]
gi|260095276|gb|EEW79167.1| DNA polymerase I [Haemophilus influenzae NT127]
Length = 930
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|229844734|ref|ZP_04464873.1| DNA polymerase I [Haemophilus influenzae 6P18H1]
gi|229812448|gb|EEP48138.1| DNA polymerase I [Haemophilus influenzae 6P18H1]
Length = 930
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|148828039|ref|YP_001292792.1| DNA polymerase I [Haemophilus influenzae PittGG]
gi|148719281|gb|ABR00409.1| DNA polymerase I [Haemophilus influenzae PittGG]
Length = 930
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|339000058|ref|ZP_08638681.1| DNA polymerase I [Halomonas sp. TD01]
gi|338763114|gb|EGP18123.1| DNA polymerase I [Halomonas sp. TD01]
Length = 924
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +Y YK +RPP PD + ++ L A +KA+ + ++
Sbjct: 58 VFDAPGKTFRDEMYSEYKAHRPPMPDDLRSQIKPLHACVKALGLPLL 104
>gi|316936191|ref|YP_004111173.1| DNA polymerase I [Rhodopseudomonas palustris DX-1]
gi|315603905|gb|ADU46440.1| DNA polymerase I [Rhodopseudomonas palustris DX-1]
Length = 1027
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ LYP YK +RPP P+ ++ ++ +++A + +E
Sbjct: 97 VTFRNALYPEYKAHRPPAPEDLIPQFGLIREAVRAFDLPCLE 138
>gi|251791718|ref|YP_003006439.1| DNA polymerase I [Dickeya zeae Ech1591]
gi|247540339|gb|ACT08960.1| DNA polymerase I [Dickeya zeae Ech1591]
Length = 928
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDDLFEHYKSHRPPMPDDLRAQIEPLHRMVKAMGLPLLSVSGVEAD 115
>gi|225570709|ref|ZP_03779732.1| hypothetical protein CLOHYLEM_06810 [Clostridium hylemonae DSM
15053]
gi|225160536|gb|EEG73155.1| hypothetical protein CLOHYLEM_06810 [Clostridium hylemonae DSM
15053]
Length = 871
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 5 YGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGL 64
YG L F + Y+T + DVH FRH +Y YK R P + + Q +
Sbjct: 36 YGFLNIMFKILDEEAPEYLT-VAFDVH------APTFRHEMYADYKGTRKPMAEELRQQV 88
Query: 65 QYLKASIKAMSIKVIE 80
+K +KAM I +IE
Sbjct: 89 PVIKDVLKAMGINIIE 104
>gi|145629928|ref|ZP_01785710.1| DNA polymerase I [Haemophilus influenzae R3021]
gi|144984209|gb|EDJ91632.1| DNA polymerase I [Haemophilus influenzae R3021]
Length = 255
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|419952743|ref|ZP_14468890.1| DNA polymerase I [Pseudomonas stutzeri TS44]
gi|387970788|gb|EIK55066.1| DNA polymerase I [Pseudomonas stutzeri TS44]
Length = 913
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + ++ L AS++A+ + ++ V + D
Sbjct: 58 VFDAKGPTFRDELFENYKSHRPPMPDDLRVQVEPLHASVRALGLPLLCVEGVEAD 112
>gi|148826499|ref|YP_001291252.1| DNA polymerase I [Haemophilus influenzae PittEE]
gi|148716659|gb|ABQ98869.1| DNA polymerase I [Haemophilus influenzae PittEE]
Length = 930
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|145628242|ref|ZP_01784043.1| DNA polymerase I [Haemophilus influenzae 22.1-21]
gi|145638340|ref|ZP_01793950.1| DNA polymerase I [Haemophilus influenzae PittII]
gi|144980017|gb|EDJ89676.1| DNA polymerase I [Haemophilus influenzae 22.1-21]
gi|145272669|gb|EDK12576.1| DNA polymerase I [Haemophilus influenzae PittII]
gi|309751482|gb|ADO81466.1| DNA polymerase I [Haemophilus influenzae R2866]
Length = 935
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|410664861|ref|YP_006917232.1| DNA polymerase I [Simiduia agarivorans SA1 = DSM 21679]
gi|409027218|gb|AFU99502.1| DNA polymerase I [Simiduia agarivorans SA1 = DSM 21679]
Length = 915
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FR ++P YK RPP PD + +Q + ++AM + ++E V +D G
Sbjct: 57 VFDAKGKTFRDDMFPDYKAQRPPMPDDLRPQVQPIHDIVRAMGLPLLVEEGVEADDVIG 115
>gi|375107040|ref|ZP_09753301.1| DNA polymerase I [Burkholderiales bacterium JOSHI_001]
gi|374667771|gb|EHR72556.1| DNA polymerase I [Burkholderiales bacterium JOSHI_001]
Length = 927
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR YP YK NR P PD + Q + + ++ + V+EV + +DA G
Sbjct: 61 VFDASGPTFRDDWYPEYKANRAPMPDDLRQQIAPIHEVVRLLGWPVLEVPGIEADDAIG 119
>gi|417844401|ref|ZP_12490445.1| DNA polymerase I [Haemophilus haemolyticus M21639]
gi|341956854|gb|EGT83270.1| DNA polymerase I [Haemophilus haemolyticus M21639]
Length = 935
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|229845908|ref|ZP_04466020.1| DNA polymerase I [Haemophilus influenzae 7P49H1]
gi|386266417|ref|YP_005829909.1| DNA polymerase I [Haemophilus influenzae R2846]
gi|229810912|gb|EEP46629.1| DNA polymerase I [Haemophilus influenzae 7P49H1]
gi|309973653|gb|ADO96854.1| DNA polymerase I [Haemophilus influenzae R2846]
Length = 930
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|71279137|ref|YP_271617.1| DNA polymerase I [Colwellia psychrerythraea 34H]
gi|71144877|gb|AAZ25350.1| DNA polymerase I [Colwellia psychrerythraea 34H]
Length = 936
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR+ ++P YK NRPP PD + + + I AM + ++ +
Sbjct: 71 IFDAKGKTFRNDMFPEYKANRPPMPDDLRTQIAPIHEIITAMGLPLLVI 119
>gi|398862275|ref|ZP_10617885.1| DNA polymerase I [Pseudomonas sp. GM79]
gi|398230922|gb|EJN16926.1| DNA polymerase I [Pseudomonas sp. GM79]
Length = 922
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR ++ YK NRP PD + ++ L AS+KA+ ++ V NV +D G
Sbjct: 58 VFDAKGGTFRDAMFAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIG 116
>gi|384136328|ref|YP_005519042.1| DNA polymerase I [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290414|gb|AEJ44524.1| DNA polymerase I [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 884
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYE 86
FRH + +YK R TPD +VQ + +++A+SI +IE++ YE
Sbjct: 66 FRHADFAAYKGTRQETPDELVQQFPLARRTLEALSIPMIEID-QYE 110
>gi|189183413|ref|YP_001937198.1| DNA polymerase I [Orientia tsutsugamushi str. Ikeda]
gi|189180184|dbj|BAG39964.1| DNA polymerase I (POL I) [Orientia tsutsugamushi str. Ikeda]
Length = 889
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 40 NFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
NFRH +YP YKN+RP P + ++ +K ++I IE+ + D
Sbjct: 68 NFRHKIYPEYKNHRPELPSELKIQFPLVREIVKYLNISAIEMEGVEAD 115
>gi|119773235|ref|YP_925975.1| DNA-directed DNA polymerase [Shewanella amazonensis SB2B]
gi|119765735|gb|ABL98305.1| DNA-directed DNA polymerase [Shewanella amazonensis SB2B]
Length = 923
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR+ +Y YK +RPP PD + + L IKA+ I +I +
Sbjct: 61 VFDAKGPTFRNEMYQEYKAHRPPMPDDLRSQIAPLHRIIKALGIPLISI 109
>gi|157959932|ref|YP_001499966.1| DNA polymerase I [Shewanella pealeana ATCC 700345]
gi|157844932|gb|ABV85431.1| DNA polymerase I [Shewanella pealeana ATCC 700345]
Length = 918
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK RPP PD + ++ L IKA+ + ++ ++ + D
Sbjct: 61 VFDAKGKTFRNDMYSEYKAQRPPMPDDLRTQIEPLHRIIKALGLPLVSISGVEAD 115
>gi|187478878|ref|YP_786902.1| DNA polymerase I [Bordetella avium 197N]
gi|115423464|emb|CAJ49998.1| DNA polymerase I [Bordetella avium 197N]
Length = 904
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 23 MTDITLDVHDLYGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK 77
+ + LD Y AC G FR +YP YK +RP P+ + ++ + A+I+A+
Sbjct: 42 LRKLVLDHKAEYAACVFDARGGTFRDDIYPEYKAHRPSMPEDLAAQVEPIHAAIRALGWP 101
Query: 78 VIEVNVMYED 87
V+ V + D
Sbjct: 102 VLAVEGVEAD 111
>gi|50118986|ref|YP_048153.1| DNA polymerase I [Pectobacterium atrosepticum SCRI1043]
gi|49609512|emb|CAG72945.1| putative DNA polymerase I [Pectobacterium atrosepticum SCRI1043]
Length = 929
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 34/55 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK +RPP P+ + + ++ L + +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHSMVKAMGLPLLAVSGVEAD 115
>gi|94495837|ref|ZP_01302416.1| DNA polymerase I [Sphingomonas sp. SKA58]
gi|94424529|gb|EAT09551.1| DNA polymerase I [Sphingomonas sp. SKA58]
Length = 928
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYEDAY 89
FR+ +Y YK NRPP P+ +V ++ + +A S+ IE ED Y
Sbjct: 70 FRNDMYDQYKANRPPAPEDLVPQFPMIRDATRAFSLPCIE-----EDGY 113
>gi|347360119|ref|YP_389938.2| DNA polymerase I [Desulfovibrio alaskensis G20]
gi|342906655|gb|ABB40243.2| DNA polymerase I [Desulfovibrio alaskensis G20]
Length = 865
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
G FRH LY YK NR TP+ +VQ L ++ ++++ I
Sbjct: 71 GPTFRHALYDQYKANRSATPEPLVQQLDPIRRGVRSLGI 109
>gi|300714614|ref|YP_003739417.1| DNA polymerase I [Erwinia billingiae Eb661]
gi|299060450|emb|CAX57557.1| DNA polymerase I [Erwinia billingiae Eb661]
Length = 928
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + ++ L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEAYKSHRPPMPDDLRAQIEPLHNMVRAMGLPLLAVSGVEAD 115
>gi|189501769|ref|YP_001957486.1| hypothetical protein Aasi_0323 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497210|gb|ACE05757.1| hypothetical protein Aasi_0323 [Candidatus Amoebophilus asiaticus
5a2]
Length = 936
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 42 RHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
RHT +P+YK +RP P+ I + Y+K +KA I V+
Sbjct: 72 RHTAFPAYKEHRPSQPEDITVAIPYVKKILKAFRIPVL 109
>gi|167470382|ref|ZP_02335086.1| DNA polymerase I [Yersinia pestis FV-1]
Length = 140
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRVQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|344201171|ref|YP_004785497.1| DNA polymerase I [Acidithiobacillus ferrivorans SS3]
gi|343776615|gb|AEM49171.1| DNA polymerase I [Acidithiobacillus ferrivorans SS3]
Length = 899
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FR LYP YK RP P+ + + L I+AM + VIE +V +D G
Sbjct: 58 IFDAPGGTFRDRLYPEYKAQRPSMPEELRAQVSLLYEWIRAMGLPLVIEPDVEADDVIG 116
>gi|290477056|ref|YP_003469968.1| multifunctional DNA polymerase I [Xenorhabdus bovienii SS-2004]
gi|289176401|emb|CBJ83208.1| multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal);
3'->5' polymerase; 3'->5' exonuclease (C-terminal)
[Xenorhabdus bovienii SS-2004]
Length = 932
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + + ++ L ++AM + ++ V
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLREQIEPLHKMVEAMGLPILVV 109
>gi|329296746|ref|ZP_08254082.1| DNA polymerase I [Plautia stali symbiont]
Length = 929
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP PD + + L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFENYKSHRPPMPDDLRAQIAPLHEMVKAMGLPLLAVSGVEAD 115
>gi|319897650|ref|YP_004135847.1| DNA polymerase i [Haemophilus influenzae F3031]
gi|317433156|emb|CBY81530.1| DNA polymerase I [Haemophilus influenzae F3031]
Length = 935
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEAD 115
>gi|294507650|ref|YP_003571708.1| DNA polymerase I [Salinibacter ruber M8]
gi|294343979|emb|CBH24757.1| DNA polymerase I [Salinibacter ruber M8]
Length = 949
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FR +Y YK NR P P+ +++ + Y+K ++ + I V+EV
Sbjct: 99 FRKEMYDDYKANRDPPPEELLENIPYIKEIVEGLDIPVLEV 139
>gi|189346016|ref|YP_001942545.1| DNA polymerase I [Chlorobium limicola DSM 245]
gi|189340163|gb|ACD89566.1| DNA polymerase I [Chlorobium limicola DSM 245]
Length = 943
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 15 YNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAM 74
+ + H Y+ +T D + FRH LY YK NRP P+ +V+ ++ + I A
Sbjct: 74 FEVWHPEYLA-VTFDSRE------KTFRHNLYEPYKANRPAPPEDLVRQIEAILELIDAF 126
Query: 75 SIKVIEV 81
SI +I++
Sbjct: 127 SIPLIKL 133
>gi|304413771|ref|ZP_07395215.1| DNA polymerase I [Candidatus Regiella insecticola LSR1]
gi|304283862|gb|EFL92256.1| DNA polymerase I [Candidatus Regiella insecticola LSR1]
Length = 937
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR LY YK++RPP PD + ++ L ++AM + ++ V
Sbjct: 61 VFDAKGKTFRDELYVQYKSHRPPMPDDLASQIEPLYRMVRAMGLPLLVV 109
>gi|254281931|ref|ZP_04956899.1| DNA polymerase I superfamily protein [gamma proteobacterium
NOR51-B]
gi|219678134|gb|EED34483.1| DNA polymerase I superfamily protein [gamma proteobacterium
NOR51-B]
Length = 911
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR+ +Y YK NRPP PD + + ++ + I AM + ++ V
Sbjct: 58 VFDAKGPTFRNEIYSEYKANRPPMPDELREQIEPIHGIIHAMGLPLLCV 106
>gi|83814085|ref|YP_445755.1| DNA polymerase I [Salinibacter ruber DSM 13855]
gi|83755479|gb|ABC43592.1| DNA polymerase I [Salinibacter ruber DSM 13855]
Length = 926
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FR +Y YK NR P P+ +++ + Y+K ++ + I V+EV
Sbjct: 76 FRKEMYDDYKANRDPPPEELLENIPYIKEIVEGLDIPVLEV 116
>gi|149378378|ref|ZP_01896080.1| DNA polymerase I [Marinobacter algicola DG893]
gi|149357343|gb|EDM45863.1| DNA polymerase I [Marinobacter algicola DG893]
Length = 911
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ LY YK RPP PD + +Q + ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRNDLYEDYKATRPPMPDDLAVQIQPIHDMVRAMGLPLLIVSGVEAD 115
>gi|400405845|ref|YP_006588704.1| DNA polymerase I [secondary endosymbiont of Ctenarytaina eucalypti]
gi|400364208|gb|AFP85276.1| DNA polymerase I [secondary endosymbiont of Ctenarytaina eucalypti]
Length = 928
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK++RPP P+ + + L +KAM + ++ VN + D
Sbjct: 61 VFDAKGKTFRDVLFENYKSHRPPMPENLRLQIAPLHKIVKAMGLPLLAVNGVEAD 115
>gi|254447582|ref|ZP_05061048.1| DNA polymerase I [gamma proteobacterium HTCC5015]
gi|198262925|gb|EDY87204.1| DNA polymerase I [gamma proteobacterium HTCC5015]
Length = 900
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + ++ + I+AM + ++ V+ + D
Sbjct: 44 VFDAKGPTFRNEIYAEYKANRPPMPDDLRVQIEPIHEIIRAMGLPLLIVDGVEAD 98
>gi|145636579|ref|ZP_01792246.1| DNA polymerase I [Haemophilus influenzae PittHH]
gi|145270105|gb|EDK10041.1| DNA polymerase I [Haemophilus influenzae PittHH]
Length = 930
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEAD 115
>gi|456738047|gb|EMF62724.1| DNA polymerase I [Stenotrophomonas maltophilia EPM1]
Length = 311
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
FRH LYP+YK NR P P+ + + + KA A+ + V+
Sbjct: 72 FRHRLYPAYKANRDPAPEALKRQFVHCKALCAALGLAVL 110
>gi|408822243|ref|ZP_11207133.1| 5'-3' exonuclease [Pseudomonas geniculata N1]
Length = 311
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
FRH LYP+YK NR P P+ + + + KA A+ + V+
Sbjct: 72 FRHRLYPAYKANRDPAPEALKRQFVHCKALCAALGLAVL 110
>gi|408421334|ref|YP_006762748.1| DNA polymerase I PolA [Desulfobacula toluolica Tol2]
gi|405108547|emb|CCK82044.1| PolA: DNA polymerase I [Desulfobacula toluolica Tol2]
Length = 911
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
G FRH +Y YK NRPP P+ + + +K I+A +I + E
Sbjct: 70 GPTFRHQMYDQYKANRPPMPEDLAVQIPDIKRVIEAFNIPIEE 112
>gi|424667153|ref|ZP_18104178.1| hypothetical protein A1OC_00711 [Stenotrophomonas maltophilia
Ab55555]
gi|401069822|gb|EJP78343.1| hypothetical protein A1OC_00711 [Stenotrophomonas maltophilia
Ab55555]
Length = 311
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
FRH LYP+YK NR P P+ + + + KA A+ + V+
Sbjct: 72 FRHRLYPAYKANRDPAPEALKRQFVHCKALCAALGLAVL 110
>gi|386717167|ref|YP_006183493.1| 5'-3' exonuclease [Stenotrophomonas maltophilia D457]
gi|384076729|emb|CCH11314.1| 5'-3' exonuclease [Stenotrophomonas maltophilia D457]
Length = 311
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
FRH LYP+YK NR P P+ + + + KA A+ + V+
Sbjct: 72 FRHRLYPAYKANRDPAPEALKRQFVHCKALCAALGLAVL 110
>gi|344206127|ref|YP_004791268.1| 5'-3' exonuclease [Stenotrophomonas maltophilia JV3]
gi|343777489|gb|AEM50042.1| 5'-3' exonuclease, resolvase-like domain-containing protein
[Stenotrophomonas maltophilia JV3]
Length = 311
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
FRH LYP+YK NR P P+ + + + KA A+ + V+
Sbjct: 72 FRHRLYPAYKANRDPAPEALKRQFVHCKALCAALGLAVL 110
>gi|194364475|ref|YP_002027085.1| 5'-3' exonuclease [Stenotrophomonas maltophilia R551-3]
gi|194347279|gb|ACF50402.1| 5'-3' exonuclease [Stenotrophomonas maltophilia R551-3]
Length = 316
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
FRH LYP+YK NR P P+ + + + KA A+ + V+
Sbjct: 72 FRHRLYPAYKANRDPAPEALKRQFVHCKALCAALGLAVL 110
>gi|190572893|ref|YP_001970738.1| exodeoxyribonuclease [Stenotrophomonas maltophilia K279a]
gi|190010815|emb|CAQ44424.1| putative exodeoxyribonuclease [Stenotrophomonas maltophilia K279a]
Length = 311
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
FRH LYP+YK NR P P+ + + + KA A+ + V+
Sbjct: 72 FRHRLYPAYKANRDPAPEALKRQFVHCKALCAALGLAVL 110
>gi|347732571|ref|ZP_08865648.1| DNA polymerase I, thermostable [Desulfovibrio sp. A2]
gi|347518684|gb|EGY25852.1| DNA polymerase I, thermostable [Desulfovibrio sp. A2]
Length = 872
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
G FRH L+P YK R TP+ +VQ L +K ++A+ + ++
Sbjct: 71 GPTFRHELFPPYKMQRAVTPEPLVQQLDPIKRMVRALGLPLV 112
>gi|330858981|emb|CBX69340.1| hypothetical protein YEW_IM36920 [Yersinia enterocolitica W22703]
Length = 323
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|238750767|ref|ZP_04612265.1| DNA polymerase I [Yersinia rohdei ATCC 43380]
gi|238710911|gb|EEQ03131.1| DNA polymerase I [Yersinia rohdei ATCC 43380]
Length = 932
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDEIFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLAVSGVEAD 115
>gi|218886806|ref|YP_002436127.1| DNA polymerase I [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757760|gb|ACL08659.1| DNA polymerase I [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 872
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
G FRH L+P YK R TP+ +VQ L +K ++A+ + ++
Sbjct: 71 GPTFRHELFPPYKMQRAVTPEPLVQQLDPIKRMVRALGLPLV 112
>gi|419840236|ref|ZP_14363632.1| DNA-directed DNA polymerase [Haemophilus haemolyticus HK386]
gi|386908057|gb|EIJ72756.1| DNA-directed DNA polymerase [Haemophilus haemolyticus HK386]
Length = 935
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEAD 115
>gi|373947471|ref|ZP_09607432.1| DNA polymerase I [Shewanella baltica OS183]
gi|386326680|ref|YP_006022797.1| DNA polymerase I [Shewanella baltica BA175]
gi|333820825|gb|AEG13491.1| DNA polymerase I [Shewanella baltica BA175]
gi|373884071|gb|EHQ12963.1| DNA polymerase I [Shewanella baltica OS183]
Length = 921
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK RPP PD + ++ L I+A+ + +I ++ + D
Sbjct: 61 VFDAKGKTFRNDMYSEYKAQRPPMPDDLRSQIEPLHRIIRALGLPLISISGVEAD 115
>gi|217975428|ref|YP_002360179.1| DNA polymerase I [Shewanella baltica OS223]
gi|217500563|gb|ACK48756.1| DNA polymerase I [Shewanella baltica OS223]
Length = 921
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK RPP PD + ++ L I+A+ + +I ++ + D
Sbjct: 61 VFDAKGKTFRNDMYSEYKAQRPPMPDDLRSQIEPLHRIIRALGLPLISISGVEAD 115
>gi|153002841|ref|YP_001368522.1| DNA polymerase I [Shewanella baltica OS185]
gi|151367459|gb|ABS10459.1| DNA polymerase I [Shewanella baltica OS185]
Length = 935
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK RPP PD + ++ L I+A+ + +I ++ + D
Sbjct: 75 VFDAKGKTFRNDMYSEYKAQRPPMPDDLRSQIEPLHRIIRALGLPLISISGVEAD 129
>gi|126172309|ref|YP_001048458.1| DNA polymerase I [Shewanella baltica OS155]
gi|386338986|ref|YP_006035352.1| DNA polymerase I [Shewanella baltica OS117]
gi|125995514|gb|ABN59589.1| DNA polymerase I [Shewanella baltica OS155]
gi|334861387|gb|AEH11858.1| DNA polymerase I [Shewanella baltica OS117]
Length = 921
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK RPP PD + ++ L I+A+ + +I ++ + D
Sbjct: 61 VFDAKGKTFRNDMYSEYKAQRPPMPDDLRSQIEPLHRIIRALGLPLISISGVEAD 115
>gi|160877586|ref|YP_001556902.1| DNA polymerase I [Shewanella baltica OS195]
gi|378710795|ref|YP_005275689.1| DNA polymerase I [Shewanella baltica OS678]
gi|418022904|ref|ZP_12661890.1| DNA polymerase I [Shewanella baltica OS625]
gi|160863108|gb|ABX51642.1| DNA polymerase I [Shewanella baltica OS195]
gi|315269784|gb|ADT96637.1| DNA polymerase I [Shewanella baltica OS678]
gi|353537906|gb|EHC07462.1| DNA polymerase I [Shewanella baltica OS625]
Length = 921
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK RPP PD + ++ L I+A+ + +I ++ + D
Sbjct: 61 VFDAKGKTFRNDMYSEYKAQRPPMPDDLRSQIEPLHRIIRALGLPLISISGVEAD 115
>gi|417843781|ref|ZP_12489847.1| DNA polymerase I [Haemophilus haemolyticus M21127]
gi|341948529|gb|EGT75155.1| DNA polymerase I [Haemophilus haemolyticus M21127]
Length = 935
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEAD 115
>gi|417841860|ref|ZP_12487958.1| DNA polymerase I [Haemophilus haemolyticus M19501]
gi|341948234|gb|EGT74865.1| DNA polymerase I [Haemophilus haemolyticus M19501]
Length = 935
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEAD 115
>gi|292486521|ref|YP_003529387.1| DNA polymerase I [Erwinia amylovora CFBP1430]
gi|428783441|ref|ZP_19000937.1| DNA polymerase I [Erwinia amylovora ACW56400]
gi|291551934|emb|CBA18971.1| DNA polymerase I [Erwinia amylovora CFBP1430]
gi|312170589|emb|CBX78852.1| DNA polymerase I [Erwinia amylovora ATCC BAA-2158]
gi|426277932|gb|EKV55654.1| DNA polymerase I [Erwinia amylovora ACW56400]
Length = 891
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ +
Sbjct: 23 VFDAKGKTFRDELFEEYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLLAI 71
>gi|292897759|ref|YP_003537128.1| DNA polymerase I [Erwinia amylovora ATCC 49946]
gi|291197607|emb|CBJ44701.1| DNA polymerase I [Erwinia amylovora ATCC 49946]
Length = 929
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ +
Sbjct: 61 VFDAKGKTFRDELFEEYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLLAI 109
>gi|421464698|ref|ZP_15913388.1| DNA-directed DNA polymerase [Acinetobacter radioresistens
WC-A-157]
gi|400205451|gb|EJO36432.1| DNA-directed DNA polymerase [Acinetobacter radioresistens
WC-A-157]
Length = 919
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P + Q + YL A I+A+ I
Sbjct: 64 FRHELSPLYKGDRPSMPSELSQQIPYLHALIRALGI 99
>gi|373468008|ref|ZP_09559294.1| DNA-directed DNA polymerase [Haemophilus sp. oral taxon 851 str.
F0397]
gi|371757046|gb|EHO45845.1| DNA-directed DNA polymerase [Haemophilus sp. oral taxon 851 str.
F0397]
Length = 935
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEAD 115
>gi|353328403|ref|ZP_08970730.1| DNA polymerase I [Wolbachia endosymbiont wVitB of Nasonia
vitripennis]
Length = 842
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 1 MGESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
+G YG L L Y I H Y+T I LD + NFRH+LY YK NR P+ +
Sbjct: 33 VGAVYGFL-NMVLKY-ISHSDYLT-IALD------SGKKNFRHSLYSEYKANRVTPPEDL 83
Query: 61 VQGLQYLKASIKAMSIKVIEV 81
+ L+ +++A + E+
Sbjct: 84 IPQFTILREAVEAFNFSYEEI 104
>gi|416052203|ref|ZP_11578105.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype e
str. SC1083]
gi|347992293|gb|EGY33702.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype e
str. SC1083]
Length = 933
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEAD 115
>gi|418020806|ref|ZP_12660008.1| DNA polymerase I [Candidatus Regiella insecticola R5.15]
gi|347603842|gb|EGY28605.1| DNA polymerase I [Candidatus Regiella insecticola R5.15]
Length = 937
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR LY YK++RPP PD + ++ L ++AM + ++ V
Sbjct: 61 VFDAKGKTFRDELYVQYKSHRPPMPDDLTSQIEPLYRMVRAMGLPLLVV 109
>gi|145640969|ref|ZP_01796551.1| DNA polymerase I [Haemophilus influenzae R3021]
gi|145274483|gb|EDK14347.1| DNA polymerase I [Haemophilus influenzae 22.4-21]
Length = 635
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|418464049|ref|ZP_13034991.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359757390|gb|EHK91544.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 932
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEAD 115
>gi|342903660|ref|ZP_08725468.1| DNA polymerase I [Haemophilus haemolyticus M21621]
gi|341954911|gb|EGT81380.1| DNA polymerase I [Haemophilus haemolyticus M21621]
Length = 935
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEAD 115
>gi|315633357|ref|ZP_07888648.1| DNA-directed DNA polymerase I [Aggregatibacter segnis ATCC 33393]
gi|315477857|gb|EFU68598.1| DNA-directed DNA polymerase I [Aggregatibacter segnis ATCC 33393]
Length = 950
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 79 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEAD 133
>gi|407768162|ref|ZP_11115541.1| DNA polymerase I [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288875|gb|EKF14352.1| DNA polymerase I [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 941
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ G +FR+ YP YK +RPP P+ +V ++ + +A ++ IE+
Sbjct: 67 IFDTKGKSFRNDFYPEYKAHRPPPPEELVPQFGLIRDATRAFNLPSIEL 115
>gi|39937781|ref|NP_950057.1| DNA polymerase I [Rhodopseudomonas palustris CGA009]
gi|39651641|emb|CAE30163.1| DNA polymerase I [Rhodopseudomonas palustris CGA009]
Length = 1025
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ LYP YK +RPP P+ ++ ++ +++A + +E
Sbjct: 97 VTFRNHLYPEYKAHRPPAPEDLIPQFALIREAVRAFDLPCLE 138
>gi|421854921|ref|ZP_16287304.1| DNA polymerase I [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|403189582|dbj|GAB73505.1| DNA polymerase I [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 919
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P + Q + YL A I+A+ I
Sbjct: 64 FRHELSPLYKGDRPSMPSELSQQIPYLHALIRALGI 99
>gi|255320831|ref|ZP_05362005.1| DNA polymerase I [Acinetobacter radioresistens SK82]
gi|262380276|ref|ZP_06073431.1| DNA polymerase I [Acinetobacter radioresistens SH164]
gi|255302000|gb|EET81243.1| DNA polymerase I [Acinetobacter radioresistens SK82]
gi|262298470|gb|EEY86384.1| DNA polymerase I [Acinetobacter radioresistens SH164]
Length = 919
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P + Q + YL A I+A+ I
Sbjct: 64 FRHELSPLYKGDRPSMPSELSQQIPYLHALIRALGI 99
>gi|192293562|ref|YP_001994167.1| DNA polymerase I [Rhodopseudomonas palustris TIE-1]
gi|192287311|gb|ACF03692.1| DNA polymerase I [Rhodopseudomonas palustris TIE-1]
Length = 1025
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FR+ LYP YK +RPP P+ ++ ++ +++A + +E
Sbjct: 97 VTFRNHLYPEYKAHRPPAPEDLIPQFALIREAVRAFDLPCLE 138
>gi|429744545|ref|ZP_19278023.1| DNA-directed DNA polymerase [Neisseria sp. oral taxon 020 str.
F0370]
gi|429162539|gb|EKY04852.1| DNA-directed DNA polymerase [Neisseria sp. oral taxon 020 str.
F0370]
Length = 932
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++ YK RPP PD + + L ++ M V+ V V
Sbjct: 54 VHDYCAVVFDAKGKNFRHEMFADYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVVPQVE 113
Query: 85 YEDAYG 90
+D G
Sbjct: 114 ADDVIG 119
>gi|329119683|ref|ZP_08248364.1| DNA-directed DNA polymerase I [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464280|gb|EGF10584.1| DNA-directed DNA polymerase I [Neisseria bacilliformis ATCC
BAA-1200]
Length = 932
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++ YK RPP PD + + L ++ M V+ V V
Sbjct: 54 VHDYCAVVFDAKGKNFRHEMFADYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVVPQVE 113
Query: 85 YEDAYG 90
+D G
Sbjct: 114 ADDVIG 119
>gi|218288809|ref|ZP_03493072.1| DNA polymerase I [Alicyclobacillus acidocaldarius LAA1]
gi|218241167|gb|EED08343.1| DNA polymerase I [Alicyclobacillus acidocaldarius LAA1]
Length = 974
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
FRH + +YK R TPD +VQ + +++A+SI +IE++
Sbjct: 156 FRHADFAAYKGTRQETPDELVQQFPLARRTLEALSIPMIEID 197
>gi|407772585|ref|ZP_11119887.1| DNA polymerase I [Thalassospira profundimaris WP0211]
gi|407284538|gb|EKF10054.1| DNA polymerase I [Thalassospira profundimaris WP0211]
Length = 943
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ G +FR+ YP YK +RPP P+ +V ++ + +A ++ IE+
Sbjct: 72 IFDTKGKSFRNDFYPDYKAHRPPPPEELVPQFGLIRDATRAFNLPSIEL 120
>gi|423122885|ref|ZP_17110569.1| DNA polymerase I [Klebsiella oxytoca 10-5246]
gi|376391819|gb|EHT04487.1| DNA polymerase I [Klebsiella oxytoca 10-5246]
Length = 928
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHTMVKAMGLPLMAV 109
>gi|145632225|ref|ZP_01787960.1| DNA polymerase I [Haemophilus influenzae 3655]
gi|145634721|ref|ZP_01790429.1| DNA polymerase I [Haemophilus influenzae PittAA]
gi|144987132|gb|EDJ93662.1| DNA polymerase I [Haemophilus influenzae 3655]
gi|145267887|gb|EDK07883.1| DNA polymerase I [Haemophilus influenzae PittAA]
Length = 935
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEHYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|453065753|gb|EMF06713.1| DNA polymerase I [Serratia marcescens VGH107]
Length = 932
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR L+ YK++RPP PD + ++ L + +KAM + ++
Sbjct: 61 VFDAKGKTFRDDLFAEYKSHRPPMPDDLRAQIEPLHSMVKAMGLPLL 107
>gi|448244558|ref|YP_007408611.1| DNA polymerase I [Serratia marcescens WW4]
gi|445214922|gb|AGE20592.1| DNA polymerase I [Serratia marcescens WW4]
Length = 932
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR L+ YK++RPP PD + ++ L + +KAM + ++
Sbjct: 61 VFDAKGKTFRDDLFAEYKSHRPPMPDDLRAQIEPLHSMVKAMGLPLL 107
>gi|190571485|ref|YP_001975843.1| DNA polymerase I [Wolbachia endosymbiont of Culex quinquefasciatus
Pel]
gi|213018887|ref|ZP_03334695.1| DNA polymerase I [Wolbachia endosymbiont of Culex quinquefasciatus
JHB]
gi|190357757|emb|CAQ55209.1| DNA polymerase I [Wolbachia endosymbiont of Culex quinquefasciatus
Pel]
gi|212995838|gb|EEB56478.1| DNA polymerase I [Wolbachia endosymbiont of Culex quinquefasciatus
JHB]
Length = 842
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 1 MGESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTI 60
+G YG L L Y I H Y+T I LD + NFRH+LY YK NR P+ +
Sbjct: 33 VGAVYGFL-NMVLKY-ISHSDYLT-IALD------SGKKNFRHSLYSEYKANRVTPPEDL 83
Query: 61 VQGLQYLKASIKAMSIKVIEV 81
+ L+ +++A + E+
Sbjct: 84 IPQFTILREAVEAFNFSYEEI 104
>gi|378581671|ref|ZP_09830315.1| DNA polymerase I [Pantoea stewartii subsp. stewartii DC283]
gi|377815585|gb|EHT98696.1| DNA polymerase I [Pantoea stewartii subsp. stewartii DC283]
Length = 927
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRSQIEPLHEMVRAMGLPLLAVSGVEAD 115
>gi|378765067|ref|YP_005193526.1| DNA polymerase I [Pantoea ananatis LMG 5342]
gi|386017735|ref|YP_005936034.1| DNA polymerase I PolA [Pantoea ananatis AJ13355]
gi|386077330|ref|YP_005990855.1| DNA polymerase I PolA [Pantoea ananatis PA13]
gi|327395816|dbj|BAK13238.1| DNA polymerase I PolA [Pantoea ananatis AJ13355]
gi|354986511|gb|AER30635.1| DNA polymerase I PolA [Pantoea ananatis PA13]
gi|365184539|emb|CCF07489.1| DNA polymerase I [Pantoea ananatis LMG 5342]
Length = 928
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRSQIEPLHEMVRAMGLPLLAVSGVEAD 115
>gi|291619508|ref|YP_003522250.1| PolA [Pantoea ananatis LMG 20103]
gi|291154538|gb|ADD79122.1| PolA [Pantoea ananatis LMG 20103]
Length = 928
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRSQIEPLHEMVRAMGLPLLAVSGVEAD 115
>gi|336431040|ref|ZP_08610894.1| hypothetical protein HMPREF0991_00013 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019962|gb|EGN49679.1| hypothetical protein HMPREF0991_00013 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 871
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 26 ITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+T DVH FRH ++ YK R P + + Q + +K +KAM I +IE
Sbjct: 56 VTFDVH------APTFRHEMFADYKGTRKPMAEELRQQVPVIKEVLKAMDIAIIE 104
>gi|444353937|ref|YP_007390081.1| DNA polymerase I (EC 2.7.7.7) [Enterobacter aerogenes EA1509E]
gi|443904767|emb|CCG32541.1| DNA polymerase I (EC 2.7.7.7) [Enterobacter aerogenes EA1509E]
Length = 775
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 23 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 71
>gi|402783202|ref|YP_006638748.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|402544037|gb|AFQ68186.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae 1084]
Length = 886
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 17 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 65
>gi|393774005|ref|ZP_10362387.1| DNA polymerase I [Novosphingobium sp. Rr 2-17]
gi|392720591|gb|EIZ78074.1| DNA polymerase I [Novosphingobium sp. Rr 2-17]
Length = 956
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 1 MGESYG---LLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTP 57
+G YG +LW+ + D D + + A ++FR+ +Y YK NRPP P
Sbjct: 34 VGAVYGYTTMLWK------LAEDLNKADGPTHLAVILDAGSISFRNDIYDKYKANRPPPP 87
Query: 58 DTIVQGLQYLKASIKAMSIKVIE 80
+ +V ++ + +A S+ IE
Sbjct: 88 EDLVPQFPLIRDATRAFSLPCIE 110
>gi|378697057|ref|YP_005179015.1| fused DNA polymerase I 5'->3' exonuclease/3'->5' polymerase/3'->5'
exonuclease [Haemophilus influenzae 10810]
gi|301169575|emb|CBW29176.1| fused DNA polymerase I 5'->3' exonuclease/3'->5' polymerase/3'->5'
exonuclease [Haemophilus influenzae 10810]
Length = 935
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ V + D
Sbjct: 61 VFDAKGKTFRDEMFEHYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEAD 115
>gi|398900947|ref|ZP_10649934.1| DNA polymerase I [Pseudomonas sp. GM50]
gi|398180776|gb|EJM68354.1| DNA polymerase I [Pseudomonas sp. GM50]
Length = 922
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR ++ YK NRP PD + ++ L AS+KA+ ++ V NV +D G
Sbjct: 58 VFDAKGGTFRDEMFAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIG 116
>gi|399003265|ref|ZP_10705931.1| DNA polymerase I [Pseudomonas sp. GM18]
gi|398123108|gb|EJM12679.1| DNA polymerase I [Pseudomonas sp. GM18]
Length = 922
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR ++ YK NRP PD + ++ L AS+KA+ ++ V NV +D G
Sbjct: 58 VFDAKGGTFRDEMFAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIG 116
>gi|398841259|ref|ZP_10598482.1| DNA polymerase I [Pseudomonas sp. GM102]
gi|398108767|gb|EJL98716.1| DNA polymerase I [Pseudomonas sp. GM102]
Length = 922
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR ++ YK NRP PD + ++ L AS+KA+ ++ V NV +D G
Sbjct: 58 VFDAKGGTFRDEMFAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIG 116
>gi|38146987|gb|AAR11878.1| DNA polymerase I [Tepidomonas sp. HM1]
Length = 927
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
++ A G FR LYP YK +R P PD + ++ + I+ + + V+ V +V +D G
Sbjct: 72 VFDAAGATFREALYPQYKAHRAPMPDDLRVQIEPIDEVIRLLGLPVLRVPDVEADDVIG 130
>gi|425744199|ref|ZP_18862259.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-323]
gi|425491587|gb|EKU57868.1| DNA-directed DNA polymerase [Acinetobacter baumannii WC-323]
Length = 921
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + Q + YL A I+A I
Sbjct: 64 FRHKLSPIYKGDRPSMPEELSQQIPYLHALIRAQGI 99
>gi|429462710|ref|YP_007184173.1| DNA polymerase I [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451811535|ref|YP_007447990.1| DNA polymerase I [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|429338224|gb|AFZ82647.1| DNA polymerase I [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451776693|gb|AGF47692.1| DNA polymerase I [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 892
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G NFRH + SYK+NRP P ++ + + IKA+ + V + + D
Sbjct: 57 IFDAPGKNFRHDICSSYKSNRPLMPQDLINQIDKIYQIIKALGLPVFSIKGVEAD 111
>gi|379731646|ref|YP_005323842.1| DNA polymerase I [Saprospira grandis str. Lewin]
gi|378577257|gb|AFC26258.1| DNA polymerase I [Saprospira grandis str. Lewin]
Length = 927
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
G FRH +Y YK NR P+ I + Y+K I+A +I V+ V N +D G
Sbjct: 64 GGTFRHEMYEPYKANREEQPEDIRLAIPYVKQIIEAFNIPVVAVPNYEADDVIG 117
>gi|384124486|ref|YP_005507100.1| DNA polymerase I, partial [Yersinia pestis D182038]
gi|262364150|gb|ACY60707.1| DNA polymerase I [Yersinia pestis D182038]
Length = 159
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN-VMYEDAYG 90
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ V +D G
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRVQIEPLHQMVKAMGLPLLVVSGVEADDVIG 119
>gi|378976180|ref|YP_005224321.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|421912334|ref|ZP_16342058.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|428152544|ref|ZP_19000203.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|364515591|gb|AEW58719.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|410113702|emb|CCM84683.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|427537409|emb|CCM96341.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
Length = 892
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 23 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 71
>gi|144899389|emb|CAM76253.1| DNA-directed DNA polymerase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 925
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 30/49 (61%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A ++FR+ +YP YK +RPP P+ +V ++ + A ++ +E+
Sbjct: 63 IFDAGRLSFRNDIYPEYKAHRPPAPEDLVPQFPLIRDVVAAFNVPSVEM 111
>gi|254515980|ref|ZP_05128040.1| DNA polymerase I superfamily protein [gamma proteobacterium NOR5-3]
gi|219675702|gb|EED32068.1| DNA polymerase I superfamily protein [gamma proteobacterium NOR5-3]
Length = 907
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR +Y YK NRPP PD + + +Q + ++ M + ++ E V +D G
Sbjct: 59 VFDAKGKTFRDDIYKEYKANRPPMPDDLREQVQPIHDIVRGMGLPLLCEPGVEADDVIG 117
>gi|416892197|ref|ZP_11923627.1| DNA polymerase I [Aggregatibacter aphrophilus ATCC 33389]
gi|347814961|gb|EGY31605.1| DNA polymerase I [Aggregatibacter aphrophilus ATCC 33389]
Length = 458
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN-VMYEDAYG 90
++ A G FR ++ YK++RPP PD + + +Q L ++A+ I ++ V V +D G
Sbjct: 105 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMVRALGIPLLVVEGVEADDVIG 163
>gi|330997297|ref|ZP_08321150.1| DNA-directed DNA polymerase [Paraprevotella xylaniphila YIT 11841]
gi|329571092|gb|EGG52799.1| DNA-directed DNA polymerase [Paraprevotella xylaniphila YIT 11841]
Length = 923
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 34 YGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
+ G FRH YP YK R TP+ I + +K I+A I ++EV
Sbjct: 59 FDPAGPTFRHEAYPEYKAQREETPEAIRTAVPIIKDIIRAYRIPILEV 106
>gi|406025383|ref|YP_006705684.1| DNA polymerase type I [Cardinium endosymbiont cEper1 of Encarsia
pergandiella]
gi|404432982|emb|CCM10264.1| DNA polymerase type I [Cardinium endosymbiont cEper1 of Encarsia
pergandiella]
Length = 315
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
FRH L+P+YK++RP P+ I + Y+K+ ++ I I N
Sbjct: 69 FRHELFPAYKSHRPAQPEEISIAIPYIKSILEGFGILSITGN 110
>gi|332881618|ref|ZP_08449266.1| DNA-directed DNA polymerase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357045700|ref|ZP_09107334.1| DNA-directed DNA polymerase [Paraprevotella clara YIT 11840]
gi|332680257|gb|EGJ53206.1| DNA-directed DNA polymerase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355531365|gb|EHH00764.1| DNA-directed DNA polymerase [Paraprevotella clara YIT 11840]
Length = 923
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 34 YGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
+ G FRH YP YK R TP+ I + +K I+A I ++EV
Sbjct: 59 FDPAGPTFRHEAYPEYKAQREETPEAIRTAVPIIKDIIRAYRIPILEV 106
>gi|51473944|ref|YP_067701.1| DNA polymerase I [Rickettsia typhi str. Wilmington]
gi|383752721|ref|YP_005427821.1| DNA polymerase I [Rickettsia typhi str. TH1527]
gi|383843556|ref|YP_005424059.1| DNA polymerase I [Rickettsia typhi str. B9991CWPP]
gi|81550503|sp|Q9RLA0.1|DPO1_RICTY RecName: Full=DNA polymerase I; Short=POL I
gi|5912311|emb|CAB56108.1| DNA polymerase I [Rickettsia typhi]
gi|51460256|gb|AAU04219.1| DNA nucleotidyltransferase (DNA-directed) [Rickettsia typhi str.
Wilmington]
gi|380759364|gb|AFE54599.1| DNA polymerase I [Rickettsia typhi str. TH1527]
gi|380760203|gb|AFE55437.1| DNA polymerase I [Rickettsia typhi str. B9991CWPP]
Length = 872
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 2 GESYGLLWRGFLSYNIRHDTYMTDITLDVHDLYGAC-----GMNFRHTLYPSYKNNRPPT 56
GE G L+ GF S ++ + D YGA G NFRH +Y +YK NRP
Sbjct: 31 GEPVGALY-GFTSMLLK-------LLSDFKPQYGAIVFDSGGKNFRHKIYQNYKANRPTP 82
Query: 57 PDTIVQGLQYLKASIKAMSIKVIEVN 82
P+ ++ L ++ ++ ++E N
Sbjct: 83 PEDLIGQLPLIRDVASHLNFAILEKN 108
>gi|336247956|ref|YP_004591666.1| DNA polymerase I [Enterobacter aerogenes KCTC 2190]
gi|334734012|gb|AEG96387.1| DNA polymerase I [Enterobacter aerogenes KCTC 2190]
Length = 926
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 109
>gi|329999655|ref|ZP_08303472.1| DNA-directed DNA polymerase [Klebsiella sp. MS 92-3]
gi|328538267|gb|EGF64411.1| DNA-directed DNA polymerase [Klebsiella sp. MS 92-3]
Length = 930
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 109
>gi|206576415|ref|YP_002241257.1| DNA polymerase I [Klebsiella pneumoniae 342]
gi|288937896|ref|YP_003441955.1| DNA polymerase I [Klebsiella variicola At-22]
gi|206565473|gb|ACI07249.1| DNA polymerase I [Klebsiella pneumoniae 342]
gi|288892605|gb|ADC60923.1| DNA polymerase I [Klebsiella variicola At-22]
Length = 930
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 109
>gi|85858429|ref|YP_460631.1| DNA polymerase I [Syntrophus aciditrophicus SB]
gi|85721520|gb|ABC76463.1| DNA polymerase I [Syntrophus aciditrophicus SB]
Length = 901
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
G FRH Y YK R TP+ ++ + Y+K I+ SI ++E
Sbjct: 72 GPTFRHETYAQYKATRKATPEALIPQIPYIKDIIRGFSIPILE 114
>gi|425083933|ref|ZP_18487030.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405597853|gb|EKB71101.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
Length = 930
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 109
>gi|425079111|ref|ZP_18482213.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425084758|ref|ZP_18487851.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405589110|gb|EKB62698.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405608761|gb|EKB81700.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
Length = 930
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 109
>gi|386037302|ref|YP_005957215.1| DNA polymerase I [Klebsiella pneumoniae KCTC 2242]
gi|424833131|ref|ZP_18257859.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|425094967|ref|ZP_18498047.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|339764430|gb|AEK00651.1| DNA polymerase I [Klebsiella pneumoniae KCTC 2242]
gi|405609171|gb|EKB82051.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|414710580|emb|CCN32284.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
Length = 930
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 109
>gi|290513119|ref|ZP_06552482.1| DNA polymerase I [Klebsiella sp. 1_1_55]
gi|289774501|gb|EFD82506.1| DNA polymerase I [Klebsiella sp. 1_1_55]
Length = 930
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 109
>gi|262041646|ref|ZP_06014839.1| DNA polymerase I [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259040999|gb|EEW42077.1| DNA polymerase I [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 927
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 109
>gi|229839864|ref|ZP_04460023.1| DNA polymerase I [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229696230|gb|EEO86277.1| DNA polymerase I [Yersinia pestis biovar Orientalis str. PEXU2]
Length = 932
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRVQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|152972672|ref|YP_001337818.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150957521|gb|ABR79551.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 930
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 109
>gi|45439883|ref|NP_991422.1| DNA polymerase I [Yersinia pestis biovar Microtus str. 91001]
gi|145601126|ref|YP_001165202.1| DNA polymerase I [Yersinia pestis Pestoides F]
gi|162418335|ref|YP_001604664.1| DNA polymerase I [Yersinia pestis Angola]
gi|170026402|ref|YP_001722907.1| DNA polymerase I [Yersinia pseudotuberculosis YPIII]
gi|229836126|ref|ZP_04456294.1| DNA polymerase I [Yersinia pestis Pestoides A]
gi|45434738|gb|AAS60299.1| DNA polymerase I [Yersinia pestis biovar Microtus str. 91001]
gi|145212822|gb|ABP42229.1| DNA polymerase I [Yersinia pestis Pestoides F]
gi|162351150|gb|ABX85098.1| DNA polymerase I [Yersinia pestis Angola]
gi|169752936|gb|ACA70454.1| DNA polymerase I [Yersinia pseudotuberculosis YPIII]
gi|229706574|gb|EEO92580.1| DNA polymerase I [Yersinia pestis Pestoides A]
Length = 932
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRVQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|51594376|ref|YP_068567.1| DNA polymerase I [Yersinia pseudotuberculosis IP 32953]
gi|186893363|ref|YP_001870475.1| DNA polymerase I [Yersinia pseudotuberculosis PB1/+]
gi|51587658|emb|CAH19258.1| DNA polymerase A [Yersinia pseudotuberculosis IP 32953]
gi|186696389|gb|ACC87018.1| DNA polymerase I [Yersinia pseudotuberculosis PB1/+]
Length = 932
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRVQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|419240115|ref|ZP_13782819.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Escherichia coli DEC9C]
gi|378079927|gb|EHW41895.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Escherichia coli DEC9C]
Length = 223
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP P+ + ++ L A +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPNDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115
>gi|153948148|ref|YP_001399022.1| DNA polymerase I [Yersinia pseudotuberculosis IP 31758]
gi|152959643|gb|ABS47104.1| DNA polymerase I [Yersinia pseudotuberculosis IP 31758]
Length = 932
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRVQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|22127682|ref|NP_671105.1| DNA polymerase I [Yersinia pestis KIM10+]
gi|108809516|ref|YP_653432.1| DNA polymerase I [Yersinia pestis Antiqua]
gi|108810410|ref|YP_646177.1| DNA polymerase I [Yersinia pestis Nepal516]
gi|150260919|ref|ZP_01917647.1| DNA polymerase I [Yersinia pestis CA88-4125]
gi|165926116|ref|ZP_02221948.1| DNA polymerase I [Yersinia pestis biovar Orientalis str. F1991016]
gi|165940228|ref|ZP_02228758.1| DNA polymerase I [Yersinia pestis biovar Orientalis str. IP275]
gi|166011452|ref|ZP_02232350.1| DNA polymerase I [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213731|ref|ZP_02239766.1| DNA polymerase I [Yersinia pestis biovar Antiqua str. B42003004]
gi|167402092|ref|ZP_02307569.1| DNA polymerase I [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167418727|ref|ZP_02310480.1| DNA polymerase I [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167427044|ref|ZP_02318797.1| DNA polymerase I [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|218927238|ref|YP_002345113.1| DNA polymerase I [Yersinia pestis CO92]
gi|229841946|ref|ZP_04462101.1| DNA polymerase I [Yersinia pestis biovar Orientalis str. India 195]
gi|229900588|ref|ZP_04515713.1| DNA polymerase I [Yersinia pestis Nepal516]
gi|270488049|ref|ZP_06205123.1| DNA-directed DNA polymerase [Yersinia pestis KIM D27]
gi|294502126|ref|YP_003566188.1| DNA polymerase I [Yersinia pestis Z176003]
gi|384120608|ref|YP_005503228.1| DNA polymerase I [Yersinia pestis D106004]
gi|384138000|ref|YP_005520702.1| DNA polymerase I [Yersinia pestis A1122]
gi|384416569|ref|YP_005625931.1| DNA polymerase I [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|420544025|ref|ZP_15042305.1| DNA polymerase I [Yersinia pestis PY-01]
gi|420549705|ref|ZP_15047375.1| DNA polymerase I [Yersinia pestis PY-02]
gi|420560395|ref|ZP_15056779.1| DNA polymerase I [Yersinia pestis PY-04]
gi|420565839|ref|ZP_15061678.1| DNA polymerase I [Yersinia pestis PY-05]
gi|420571301|ref|ZP_15066649.1| DNA polymerase I [Yersinia pestis PY-06]
gi|420576581|ref|ZP_15071425.1| DNA polymerase I [Yersinia pestis PY-07]
gi|420582034|ref|ZP_15076380.1| DNA polymerase I [Yersinia pestis PY-08]
gi|420592458|ref|ZP_15085783.1| DNA polymerase I [Yersinia pestis PY-09]
gi|420597790|ref|ZP_15090577.1| DNA polymerase I [Yersinia pestis PY-10]
gi|420598026|ref|ZP_15090785.1| DNA polymerase I [Yersinia pestis PY-11]
gi|420603500|ref|ZP_15095645.1| DNA polymerase I [Yersinia pestis PY-12]
gi|420608858|ref|ZP_15100507.1| DNA polymerase I [Yersinia pestis PY-13]
gi|420614435|ref|ZP_15105485.1| DNA polymerase I family protein [Yersinia pestis PY-14]
gi|420619720|ref|ZP_15110092.1| DNA polymerase I [Yersinia pestis PY-15]
gi|420624853|ref|ZP_15114736.1| DNA polymerase I [Yersinia pestis PY-16]
gi|420634939|ref|ZP_15123833.1| DNA polymerase I [Yersinia pestis PY-19]
gi|420635129|ref|ZP_15123996.1| DNA polymerase I [Yersinia pestis PY-25]
gi|420640746|ref|ZP_15129066.1| DNA polymerase I [Yersinia pestis PY-29]
gi|420650972|ref|ZP_15138348.1| DNA polymerase I [Yersinia pestis PY-32]
gi|420651609|ref|ZP_15138902.1| DNA polymerase I [Yersinia pestis PY-34]
gi|420656953|ref|ZP_15143729.1| DNA polymerase I [Yersinia pestis PY-36]
gi|420662127|ref|ZP_15148347.1| DNA polymerase I [Yersinia pestis PY-42]
gi|420672410|ref|ZP_15157672.1| DNA polymerase I family protein [Yersinia pestis PY-45]
gi|420677790|ref|ZP_15162571.1| DNA polymerase I [Yersinia pestis PY-46]
gi|420678137|ref|ZP_15162874.1| DNA polymerase I [Yersinia pestis PY-47]
gi|420683438|ref|ZP_15167639.1| DNA polymerase I [Yersinia pestis PY-48]
gi|420693865|ref|ZP_15176847.1| DNA polymerase I [Yersinia pestis PY-52]
gi|420694173|ref|ZP_15177119.1| DNA polymerase I [Yersinia pestis PY-53]
gi|420705727|ref|ZP_15186696.1| DNA polymerase I family protein [Yersinia pestis PY-54]
gi|420710681|ref|ZP_15191215.1| DNA polymerase I [Yersinia pestis PY-55]
gi|420716203|ref|ZP_15196106.1| DNA polymerase I [Yersinia pestis PY-56]
gi|420716471|ref|ZP_15196341.1| DNA polymerase I [Yersinia pestis PY-58]
gi|420722124|ref|ZP_15201148.1| DNA polymerase I [Yersinia pestis PY-59]
gi|420727693|ref|ZP_15206091.1| DNA polymerase I [Yersinia pestis PY-60]
gi|420737860|ref|ZP_15215275.1| DNA polymerase I [Yersinia pestis PY-61]
gi|420738255|ref|ZP_15215618.1| DNA polymerase I [Yersinia pestis PY-63]
gi|420743356|ref|ZP_15220211.1| DNA polymerase I [Yersinia pestis PY-64]
gi|420749354|ref|ZP_15225224.1| DNA polymerase I [Yersinia pestis PY-65]
gi|420760457|ref|ZP_15234575.1| DNA polymerase I [Yersinia pestis PY-66]
gi|420760611|ref|ZP_15234694.1| DNA polymerase I [Yersinia pestis PY-71]
gi|420765633|ref|ZP_15239240.1| DNA polymerase I [Yersinia pestis PY-72]
gi|420770826|ref|ZP_15243888.1| DNA polymerase I [Yersinia pestis PY-76]
gi|420776041|ref|ZP_15248609.1| DNA polymerase I [Yersinia pestis PY-88]
gi|420781442|ref|ZP_15253347.1| DNA polymerase I [Yersinia pestis PY-89]
gi|420786967|ref|ZP_15258170.1| DNA polymerase I family protein [Yersinia pestis PY-90]
gi|420792449|ref|ZP_15263117.1| DNA polymerase I [Yersinia pestis PY-91]
gi|420802870|ref|ZP_15272489.1| DNA polymerase I [Yersinia pestis PY-92]
gi|420802973|ref|ZP_15272574.1| DNA polymerase I [Yersinia pestis PY-93]
gi|420808238|ref|ZP_15277351.1| DNA polymerase I family protein [Yersinia pestis PY-94]
gi|420813715|ref|ZP_15282246.1| DNA polymerase I [Yersinia pestis PY-95]
gi|420819047|ref|ZP_15287103.1| DNA polymerase I [Yersinia pestis PY-96]
gi|420829404|ref|ZP_15296402.1| DNA polymerase I [Yersinia pestis PY-98]
gi|420829822|ref|ZP_15296761.1| DNA polymerase I [Yersinia pestis PY-99]
gi|420834867|ref|ZP_15301310.1| DNA polymerase I [Yersinia pestis PY-100]
gi|420845246|ref|ZP_15310725.1| DNA polymerase I [Yersinia pestis PY-101]
gi|420845622|ref|ZP_15311051.1| DNA polymerase I [Yersinia pestis PY-102]
gi|420850769|ref|ZP_15315681.1| DNA polymerase I [Yersinia pestis PY-103]
gi|420856406|ref|ZP_15320392.1| DNA polymerase I [Yersinia pestis PY-113]
gi|421761441|ref|ZP_16198241.1| DNA polymerase I [Yersinia pestis INS]
gi|21960799|gb|AAM87356.1|AE013984_2 DNA polymerase I [Yersinia pestis KIM10+]
gi|108774058|gb|ABG16577.1| DNA polymerase I [Yersinia pestis Nepal516]
gi|108781429|gb|ABG15487.1| DNA polymerase I [Yersinia pestis Antiqua]
gi|115345849|emb|CAL18707.1| DNA polymerase I [Yersinia pestis CO92]
gi|149290327|gb|EDM40404.1| DNA polymerase I [Yersinia pestis CA88-4125]
gi|165911860|gb|EDR30507.1| DNA polymerase I [Yersinia pestis biovar Orientalis str. IP275]
gi|165921976|gb|EDR39153.1| DNA polymerase I [Yersinia pestis biovar Orientalis str. F1991016]
gi|165989598|gb|EDR41899.1| DNA polymerase I [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205133|gb|EDR49613.1| DNA polymerase I [Yersinia pestis biovar Antiqua str. B42003004]
gi|166962721|gb|EDR58742.1| DNA polymerase I [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167048467|gb|EDR59875.1| DNA polymerase I [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167053971|gb|EDR63802.1| DNA polymerase I [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|229682369|gb|EEO78460.1| DNA polymerase I [Yersinia pestis Nepal516]
gi|229690256|gb|EEO82310.1| DNA polymerase I [Yersinia pestis biovar Orientalis str. India 195]
gi|262360204|gb|ACY56925.1| DNA polymerase I [Yersinia pestis D106004]
gi|270336553|gb|EFA47330.1| DNA-directed DNA polymerase [Yersinia pestis KIM D27]
gi|294352585|gb|ADE62926.1| DNA polymerase I [Yersinia pestis Z176003]
gi|320017073|gb|ADW00645.1| DNA polymerase I [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|342853129|gb|AEL71682.1| DNA polymerase I [Yersinia pestis A1122]
gi|391434738|gb|EIQ95899.1| DNA polymerase I [Yersinia pestis PY-02]
gi|391434977|gb|EIQ96095.1| DNA polymerase I [Yersinia pestis PY-01]
gi|391450511|gb|EIR10140.1| DNA polymerase I [Yersinia pestis PY-05]
gi|391451018|gb|EIR10563.1| DNA polymerase I [Yersinia pestis PY-04]
gi|391452375|gb|EIR11784.1| DNA polymerase I [Yersinia pestis PY-06]
gi|391453481|gb|EIR12793.1| DNA polymerase I [Yersinia pestis PY-09]
gi|391466715|gb|EIR24764.1| DNA polymerase I [Yersinia pestis PY-07]
gi|391467365|gb|EIR25351.1| DNA polymerase I [Yersinia pestis PY-10]
gi|391467553|gb|EIR25523.1| DNA polymerase I [Yersinia pestis PY-08]
gi|391484596|gb|EIR40834.1| DNA polymerase I [Yersinia pestis PY-12]
gi|391484982|gb|EIR41178.1| DNA polymerase I [Yersinia pestis PY-11]
gi|391498899|gb|EIR53604.1| DNA polymerase I [Yersinia pestis PY-13]
gi|391499180|gb|EIR53831.1| DNA polymerase I [Yersinia pestis PY-15]
gi|391500256|gb|EIR54779.1| DNA polymerase I [Yersinia pestis PY-19]
gi|391502336|gb|EIR56646.1| DNA polymerase I family protein [Yersinia pestis PY-14]
gi|391513900|gb|EIR67062.1| DNA polymerase I [Yersinia pestis PY-16]
gi|391516538|gb|EIR69427.1| DNA polymerase I [Yersinia pestis PY-25]
gi|391517582|gb|EIR70370.1| DNA polymerase I [Yersinia pestis PY-32]
gi|391529396|gb|EIR81090.1| DNA polymerase I [Yersinia pestis PY-29]
gi|391532088|gb|EIR83519.1| DNA polymerase I [Yersinia pestis PY-34]
gi|391535002|gb|EIR86121.1| DNA polymerase I family protein [Yersinia pestis PY-45]
gi|391546567|gb|EIR96543.1| DNA polymerase I [Yersinia pestis PY-36]
gi|391548382|gb|EIR98190.1| DNA polymerase I [Yersinia pestis PY-46]
gi|391548809|gb|EIR98568.1| DNA polymerase I [Yersinia pestis PY-42]
gi|391563323|gb|EIS11645.1| DNA polymerase I [Yersinia pestis PY-52]
gi|391563540|gb|EIS11846.1| DNA polymerase I [Yersinia pestis PY-47]
gi|391565484|gb|EIS13592.1| DNA polymerase I [Yersinia pestis PY-48]
gi|391566715|gb|EIS14674.1| DNA polymerase I family protein [Yersinia pestis PY-54]
gi|391578932|gb|EIS25125.1| DNA polymerase I [Yersinia pestis PY-55]
gi|391579094|gb|EIS25267.1| DNA polymerase I [Yersinia pestis PY-53]
gi|391580149|gb|EIS26179.1| DNA polymerase I [Yersinia pestis PY-56]
gi|391606774|gb|EIS49467.1| DNA polymerase I [Yersinia pestis PY-60]
gi|391608253|gb|EIS50765.1| DNA polymerase I [Yersinia pestis PY-61]
gi|391608547|gb|EIS51023.1| DNA polymerase I [Yersinia pestis PY-58]
gi|391609178|gb|EIS51603.1| DNA polymerase I [Yersinia pestis PY-59]
gi|391622214|gb|EIS63169.1| DNA polymerase I [Yersinia pestis PY-63]
gi|391623734|gb|EIS64470.1| DNA polymerase I [Yersinia pestis PY-66]
gi|391631264|gb|EIS70914.1| DNA polymerase I [Yersinia pestis PY-64]
gi|391632922|gb|EIS72400.1| DNA polymerase I [Yersinia pestis PY-65]
gi|391643976|gb|EIS82075.1| DNA polymerase I [Yersinia pestis PY-71]
gi|391647023|gb|EIS84706.1| DNA polymerase I [Yersinia pestis PY-72]
gi|391656567|gb|EIS93188.1| DNA polymerase I [Yersinia pestis PY-76]
gi|391664114|gb|EIS99880.1| DNA polymerase I [Yersinia pestis PY-88]
gi|391669288|gb|EIT04428.1| DNA polymerase I [Yersinia pestis PY-89]
gi|391670250|gb|EIT05309.1| DNA polymerase I family protein [Yersinia pestis PY-90]
gi|391673402|gb|EIT08128.1| DNA polymerase I [Yersinia pestis PY-91]
gi|391673777|gb|EIT08456.1| DNA polymerase I [Yersinia pestis PY-92]
gi|391687906|gb|EIT21176.1| DNA polymerase I [Yersinia pestis PY-93]
gi|391690645|gb|EIT23657.1| DNA polymerase I family protein [Yersinia pestis PY-94]
gi|391691607|gb|EIT24519.1| DNA polymerase I [Yersinia pestis PY-98]
gi|391702763|gb|EIT34613.1| DNA polymerase I [Yersinia pestis PY-95]
gi|391705298|gb|EIT36863.1| DNA polymerase I [Yersinia pestis PY-96]
gi|391706171|gb|EIT37631.1| DNA polymerase I [Yersinia pestis PY-101]
gi|391717328|gb|EIT47706.1| DNA polymerase I [Yersinia pestis PY-99]
gi|391721177|gb|EIT51138.1| DNA polymerase I [Yersinia pestis PY-100]
gi|391732011|gb|EIT60637.1| DNA polymerase I [Yersinia pestis PY-102]
gi|391735443|gb|EIT63583.1| DNA polymerase I [Yersinia pestis PY-103]
gi|391737910|gb|EIT65756.1| DNA polymerase I [Yersinia pestis PY-113]
gi|411177763|gb|EKS47775.1| DNA polymerase I [Yersinia pestis INS]
Length = 932
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRVQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|428932828|ref|ZP_19006397.1| DNA polymerase I [Klebsiella pneumoniae JHCK1]
gi|426306738|gb|EKV68835.1| DNA polymerase I [Klebsiella pneumoniae JHCK1]
Length = 930
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 109
>gi|365144392|ref|ZP_09348655.1| DNA polymerase I [Klebsiella sp. 4_1_44FAA]
gi|419975303|ref|ZP_14490715.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419981063|ref|ZP_14496342.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419986392|ref|ZP_14501525.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419991989|ref|ZP_14506949.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|419998392|ref|ZP_14513180.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420004281|ref|ZP_14518920.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420010026|ref|ZP_14524504.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420016077|ref|ZP_14530372.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420021547|ref|ZP_14535726.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420027070|ref|ZP_14541067.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420032990|ref|ZP_14546800.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420038462|ref|ZP_14552108.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420044576|ref|ZP_14558055.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420050421|ref|ZP_14563720.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420055809|ref|ZP_14568972.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420060642|ref|ZP_14573639.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420067350|ref|ZP_14580143.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420073941|ref|ZP_14586560.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420078532|ref|ZP_14590988.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420084173|ref|ZP_14596439.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421917949|ref|ZP_16347489.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|428940113|ref|ZP_19013206.1| DNA polymerase I [Klebsiella pneumoniae VA360]
gi|363648183|gb|EHL87366.1| DNA polymerase I [Klebsiella sp. 4_1_44FAA]
gi|397343546|gb|EJJ36691.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397344023|gb|EJJ37161.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397348376|gb|EJJ41477.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397360567|gb|EJJ53243.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397361962|gb|EJJ54617.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397366460|gb|EJJ59077.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397375400|gb|EJJ67691.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397379946|gb|EJJ72136.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397386732|gb|EJJ78801.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397394187|gb|EJJ85923.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397396264|gb|EJJ87958.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397404166|gb|EJJ95686.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397411095|gb|EJK02359.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397411690|gb|EJK02940.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397421229|gb|EJK12254.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397428163|gb|EJK18909.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397432887|gb|EJK23542.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397437148|gb|EJK27719.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397444658|gb|EJK34925.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397450498|gb|EJK40602.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|410119651|emb|CCM90114.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426302813|gb|EKV65002.1| DNA polymerase I [Klebsiella pneumoniae VA360]
Length = 930
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 109
>gi|238892277|ref|YP_002917011.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|424931031|ref|ZP_18349403.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|449059711|ref|ZP_21737397.1| DNA polymerase I [Klebsiella pneumoniae hvKP1]
gi|238544593|dbj|BAH60944.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|407805218|gb|EKF76469.1| DNA polymerase I [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|448874596|gb|EMB09637.1| DNA polymerase I [Klebsiella pneumoniae hvKP1]
Length = 930
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAV 109
>gi|390437335|ref|ZP_10225873.1| DNA polymerase I [Pantoea agglomerans IG1]
Length = 928
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDELRAQIEPLHEMVRAMGLPLLAVSGVEAD 115
>gi|372277221|ref|ZP_09513257.1| DNA polymerase I [Pantoea sp. SL1_M5]
Length = 928
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDELRAQIEPLHEMVRAMGLPLLAVSGVEAD 115
>gi|308188689|ref|YP_003932820.1| DNA polymerase I [Pantoea vagans C9-1]
gi|308059199|gb|ADO11371.1| DNA polymerase I [Pantoea vagans C9-1]
Length = 928
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDELRAQIEPLHEMVRAMGLPLLAVSGVEAD 115
>gi|194290334|ref|YP_002006241.1| DNA polymerase I [Cupriavidus taiwanensis LMG 19424]
gi|193224169|emb|CAQ70178.1| DNA polymerase A; 5'->3' exonuclease ; 3'->5' polymerase ; 3'->5'
exonuclease [Cupriavidus taiwanensis LMG 19424]
Length = 939
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
Y AC G FR LYP+YK +RP P+ + + ++ + +++A+ ++ V+ + D
Sbjct: 56 YSACVFDAKGKTFRDDLYPAYKEHRPSMPEDLARQIEPIHEAVRALGWPIVVVDGVEAD 114
>gi|126724960|ref|ZP_01740803.1| DNA polymerase I [Rhodobacterales bacterium HTCC2150]
gi|126706124|gb|EBA05214.1| DNA polymerase I [Rhodobacteraceae bacterium HTCC2150]
Length = 931
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 24 TDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
+D V ++ G +FR+ +Y YK NRPP P+ +V + + +A +I EV
Sbjct: 60 SDAPTHVAVIFDYSGKSFRNQIYDKYKANRPPAPEDLVPQFPLTRDATRAFNIACYEV 117
>gi|381197154|ref|ZP_09904495.1| DNA polymerase I [Acinetobacter lwoffii WJ10621]
Length = 921
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + + + YL A I+A+ I
Sbjct: 64 FRHVLSPIYKGDRPSMPEELSEQIPYLHALIRALGI 99
>gi|418289130|ref|ZP_12901513.1| DNA polymerase I [Neisseria meningitidis NM233]
gi|372200282|gb|EHP14384.1| DNA polymerase I [Neisseria meningitidis NM233]
Length = 938
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMY 85
VHD ++ A G NFRH ++ YK RPP PD + + L ++ M V+ + +
Sbjct: 53 VHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIGQVE 112
Query: 86 ED 87
D
Sbjct: 113 AD 114
>gi|357974770|ref|ZP_09138741.1| DNA polymerase I [Sphingomonas sp. KC8]
Length = 925
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
A FR+ +Y YK NRPP P+ ++ ++ + +A S+ IE
Sbjct: 65 AASKTFRNDMYDKYKANRPPAPEDLIPQFPLIRHATRAFSVPCIE 109
>gi|333902486|ref|YP_004476359.1| DNA polymerase I [Pseudomonas fulva 12-X]
gi|333117751|gb|AEF24265.1| DNA polymerase I [Pseudomonas fulva 12-X]
Length = 951
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK NRPP PD + ++ L AS++ + + ++ V + D
Sbjct: 58 VFDAKGGTFRDELFADYKANRPPMPDELRLQVEPLHASVRGLGLPLLCVEGVEAD 112
>gi|262369822|ref|ZP_06063149.1| DNA polymerase I [Acinetobacter johnsonii SH046]
gi|262314861|gb|EEY95901.1| DNA polymerase I [Acinetobacter johnsonii SH046]
Length = 921
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
FRH L P YK +RP P+ + + + YL A I+A+ I
Sbjct: 64 FRHVLSPIYKGDRPSMPEELSEQIPYLHALIRALGI 99
>gi|260771611|ref|ZP_05880531.1| DNA polymerase I [Vibrio metschnikovii CIP 69.14]
gi|260613388|gb|EEX38587.1| DNA polymerase I [Vibrio metschnikovii CIP 69.14]
Length = 887
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK +RPP PD + ++ L I+AM + +I + + D
Sbjct: 17 IFDAKGKTFRDDMYDQYKAHRPPMPDDLRCQIEPLHQIIRAMGLPLISIEGVEAD 71
>gi|153814488|ref|ZP_01967156.1| hypothetical protein RUMTOR_00701 [Ruminococcus torques ATCC 27756]
gi|317500531|ref|ZP_07958753.1| DNA polymerase I [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089370|ref|ZP_08338270.1| hypothetical protein HMPREF1025_01853 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438767|ref|ZP_08618391.1| hypothetical protein HMPREF0990_00785 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145847982|gb|EDK24900.1| DNA-directed DNA polymerase [Ruminococcus torques ATCC 27756]
gi|316898041|gb|EFV20090.1| DNA polymerase I [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405433|gb|EGG84968.1| hypothetical protein HMPREF1025_01853 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336017899|gb|EGN47653.1| hypothetical protein HMPREF0990_00785 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 871
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 5 YGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGL 64
YG L F + Y+T +T DVH FRH ++ YK R P + + Q +
Sbjct: 36 YGFLNIMFKILDEEKPEYLT-VTFDVH------APTFRHEMFSEYKGTRKPMAEELRQQV 88
Query: 65 QYLKASIKAMSIKVIE 80
+K ++AM+I IE
Sbjct: 89 PVIKEVLEAMNISTIE 104
>gi|331084997|ref|ZP_08334084.1| hypothetical protein HMPREF0987_00387 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408697|gb|EGG88162.1| hypothetical protein HMPREF0987_00387 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 870
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 22 YMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
Y+T + DVH FRH ++ YK R P + + Q + +K ++AM IK++E
Sbjct: 53 YLT-VAFDVH------APTFRHKMFSDYKGTRKPMAEELRQQVPVMKEVLRAMKIKIVE 104
>gi|39995648|ref|NP_951599.1| DNA polymerase I [Geobacter sulfurreducens PCA]
gi|409911106|ref|YP_006889571.1| DNA polymerase I [Geobacter sulfurreducens KN400]
gi|39982411|gb|AAR33872.1| DNA polymerase I [Geobacter sulfurreducens PCA]
gi|298504670|gb|ADI83393.1| DNA polymerase I [Geobacter sulfurreducens KN400]
Length = 891
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FR +YP YK NR PD +V + +K ++A SI V+E+
Sbjct: 66 FRTEIYPDYKANRAAMPDDLVPQIGPIKEMVRAFSIPVLEL 106
>gi|424843386|ref|ZP_18268011.1| DNA polymerase I [Saprospira grandis DSM 2844]
gi|395321584|gb|EJF54505.1| DNA polymerase I [Saprospira grandis DSM 2844]
Length = 927
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVMYEDAYG 90
G FRH +Y YK NR P+ I + Y+K ++A +I V+ V N +D G
Sbjct: 64 GGTFRHEMYAPYKANREEQPEDIRLAIPYIKQIVEAFNIPVVAVPNYEADDVIG 117
>gi|147678311|ref|YP_001212526.1| DNA polymerase I [Pelotomaculum thermopropionicum SI]
gi|146274408|dbj|BAF60157.1| DNA polymerase I - 3'-5' exonuclease and polymerase domains
[Pelotomaculum thermopropionicum SI]
Length = 882
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
+ FRH + YK +RP TPD + LK +KAM I+V E
Sbjct: 64 ITFRHDDFEKYKAHRPATPDDLRPQFPVLKEVLKAMRIQVFE 105
>gi|325661247|ref|ZP_08149874.1| hypothetical protein HMPREF0490_00607 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472754|gb|EGC75965.1| hypothetical protein HMPREF0490_00607 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 870
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 22 YMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
Y+T + DVH FRH ++ YK R P + + Q + +K ++AM IK++E
Sbjct: 53 YLT-VAFDVH------APTFRHKMFSDYKGTRKPMAEELRQQVPVMKEVLRAMKIKIVE 104
>gi|440758546|ref|ZP_20937710.1| DNA polymerase I [Pantoea agglomerans 299R]
gi|436427720|gb|ELP25393.1| DNA polymerase I [Pantoea agglomerans 299R]
Length = 928
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHEMVRAMGLPLLAVSGVEAD 115
>gi|83594843|ref|YP_428595.1| DNA polymerase A [Rhodospirillum rubrum ATCC 11170]
gi|386351608|ref|YP_006049856.1| DNA polymerase A [Rhodospirillum rubrum F11]
gi|83577757|gb|ABC24308.1| DNA polymerase A [Rhodospirillum rubrum ATCC 11170]
gi|346720044|gb|AEO50059.1| DNA polymerase A [Rhodospirillum rubrum F11]
Length = 924
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 27/42 (64%)
Query: 39 MNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
++FR+ +YP YK RPP P+ ++ ++ +++A ++ IE
Sbjct: 65 VSFRNEIYPLYKAQRPPPPEDLIPQFPLIREAVRAFNVPCIE 106
>gi|381403373|ref|ZP_09928057.1| DNA polymerase I [Pantoea sp. Sc1]
gi|380736572|gb|EIB97635.1| DNA polymerase I [Pantoea sp. Sc1]
Length = 928
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHEMVRAMGLPLLAVSGVEAD 115
>gi|304399055|ref|ZP_07380924.1| DNA polymerase I [Pantoea sp. aB]
gi|304353515|gb|EFM17893.1| DNA polymerase I [Pantoea sp. aB]
Length = 928
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHEMVRAMGLPLLAVSGVEAD 115
>gi|115424490|dbj|BAF33373.1| DNA polymerase I [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 942
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYE 86
FRH + +YK R TPD +VQ + +++A+SI ++E++ YE
Sbjct: 124 FRHADFAAYKGTRQETPDELVQQFPLARRTLEALSIPMVEID-QYE 168
>gi|258512307|ref|YP_003185741.1| DNA polymerase I [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479033|gb|ACV59352.1| DNA polymerase I [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 895
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYE 86
FRH + +YK R TPD +VQ + +++A+SI ++E++ YE
Sbjct: 77 FRHADFAAYKGTRQETPDELVQQFPLARRTLEALSIPMVEID-QYE 121
>gi|254780277|ref|YP_003064690.1| DNA polymerase I [Candidatus Liberibacter asiaticus str. psy62]
gi|254039954|gb|ACT56750.1| DNA polymerase I [Candidatus Liberibacter asiaticus str. psy62]
Length = 976
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 7 LLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQY 66
+LW+ L N R ++ + + ++ + FR+ +YP YK NRP P+ ++ L
Sbjct: 44 MLWK--LLQNSRKESIASHFAV----IFDYPAVTFRNEIYPDYKANRPKIPEMLLPQLPL 97
Query: 67 LKASIKAMSIKVIEV 81
++ + +A I IE+
Sbjct: 98 VRLATQAFGIPAIEI 112
>gi|115526809|ref|YP_783720.1| DNA polymerase I [Rhodopseudomonas palustris BisA53]
gi|115520756|gb|ABJ08740.1| DNA polymerase I [Rhodopseudomonas palustris BisA53]
Length = 1012
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
FR+ +YP+YK RPP P+ ++ ++ +++A + +E
Sbjct: 89 FRNEMYPAYKAQRPPAPEDLIPQFALIREAVRAFDLPCLE 128
>gi|404497831|ref|YP_006721937.1| DNA polymerase I [Geobacter metallireducens GS-15]
gi|418067867|ref|ZP_12705197.1| DNA polymerase I [Geobacter metallireducens RCH3]
gi|78195431|gb|ABB33198.1| DNA polymerase I [Geobacter metallireducens GS-15]
gi|373558046|gb|EHP84411.1| DNA polymerase I [Geobacter metallireducens RCH3]
Length = 892
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FR LYP YK NR PD +V + +K ++A +I V+E+
Sbjct: 67 FRTDLYPDYKANRSAMPDDLVPQIAPIKEMVRAFNIPVLEL 107
>gi|420555009|ref|ZP_15052116.1| DNA polymerase I, partial [Yersinia pestis PY-03]
gi|391438600|gb|EIQ99332.1| DNA polymerase I, partial [Yersinia pestis PY-03]
Length = 806
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRVQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|313200166|ref|YP_004038824.1| DNA polymerase i [Methylovorus sp. MP688]
gi|312439482|gb|ADQ83588.1| DNA polymerase I [Methylovorus sp. MP688]
Length = 918
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 19 HDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK- 77
H Y D + V D A G FR +YP YK NR PD + ++ L +I+AM
Sbjct: 45 HKDYPADYSACVFD---AKGKTFRDDIYPEYKANRASMPDDLRLQIEPLHTAIQAMGWPL 101
Query: 78 VIEVNVMYEDAYG 90
++E V +D G
Sbjct: 102 IVEDGVEADDVIG 114
>gi|253998100|ref|YP_003050163.1| DNA polymerase I [Methylovorus glucosetrophus SIP3-4]
gi|253984779|gb|ACT49636.1| DNA polymerase I [Methylovorus glucosetrophus SIP3-4]
Length = 918
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 19 HDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK- 77
H Y D + V D A G FR +YP YK NR PD + ++ L +I+AM
Sbjct: 45 HKDYPADYSACVFD---AKGKTFRDDIYPEYKANRASMPDDLRLQIEPLHTAIQAMGWPL 101
Query: 78 VIEVNVMYEDAYG 90
++E V +D G
Sbjct: 102 IVEDGVEADDVIG 114
>gi|403056445|ref|YP_006644662.1| DNA polymerase I [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402803771|gb|AFR01409.1| DNA polymerase I [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 891
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK +RPP P+ + + ++ L +KAM + ++ V+ + D
Sbjct: 23 VFDAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHKMVKAMGLPLLAVSGVEAD 77
>gi|254483343|ref|ZP_05096574.1| DNA polymerase I superfamily protein [marine gamma
proteobacterium HTCC2148]
gi|214036438|gb|EEB77114.1| DNA polymerase I superfamily protein [marine gamma
proteobacterium HTCC2148]
Length = 896
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
++ A G FR LYP YK NRP PD + + + + + ++AM +
Sbjct: 52 VFDAKGKTFRDDLYPEYKANRPSMPDELREQIVPIHSIVRAMGL 95
>gi|261492276|ref|ZP_05988839.1| DNA-directed DNA polymerase I [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261312055|gb|EEY13195.1| DNA-directed DNA polymerase I [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 952
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
G FR L+ YK++RPP PD + ++ L IKA+ I +I + + D
Sbjct: 66 GKTFRDELFKQYKSHRPPMPDDLRPQIEPLHRIIKALGIPLISIEGVEAD 115
>gi|114565093|ref|YP_752607.1| DNA polymerase I [Shewanella frigidimarina NCIMB 400]
gi|114336386|gb|ABI73768.1| DNA polymerase I [Shewanella frigidimarina NCIMB 400]
Length = 918
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK RPP PD + ++ L I AM + +I ++ + D
Sbjct: 61 VFDAKGKTFRNDMYGEYKAQRPPMPDDLRNQIEPLHRIIHAMGLPLISISGVEAD 115
>gi|398803654|ref|ZP_10562672.1| DNA polymerase I [Polaromonas sp. CF318]
gi|398095907|gb|EJL86238.1| DNA polymerase I [Polaromonas sp. CF318]
Length = 943
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 23 MTDITLDVHDLYGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK 77
M + DV + AC G FR LYP YK R P PD + ++ + ++ + K
Sbjct: 49 MQKLRKDVRADFAACVFDAKGPTFRDALYPEYKAQRSPMPDDLRSQVEPIHEVVRLLGWK 108
Query: 78 VIEV 81
V++V
Sbjct: 109 VLDV 112
>gi|261856641|ref|YP_003263924.1| 5'-3' exonuclease [Halothiobacillus neapolitanus c2]
gi|261837110|gb|ACX96877.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Halothiobacillus neapolitanus c2]
Length = 324
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 37 CGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
C +FR T+YP+YK +RPP P + L +A +A + I+
Sbjct: 86 CNRSFRQTIYPAYKAHRPPAPAELTAQLPRCRALAEAAGLCAID 129
>gi|163814036|ref|ZP_02205428.1| hypothetical protein COPEUT_00189 [Coprococcus eutactus ATCC 27759]
gi|158450485|gb|EDP27480.1| DNA-directed DNA polymerase [Coprococcus eutactus ATCC 27759]
Length = 886
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIE 80
FRH +Y YK R P PD + + + +K + AM+I +IE
Sbjct: 73 FRHLMYKEYKGTRKPMPDELREQVPLIKEVLTAMNITIIE 112
>gi|237807112|ref|YP_002891552.1| DNA polymerase I [Tolumonas auensis DSM 9187]
gi|237499373|gb|ACQ91966.1| DNA polymerase I [Tolumonas auensis DSM 9187]
Length = 910
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G +FR+ LY YK++RPP PD + ++ + I AM + ++ ++ + D
Sbjct: 61 VFDAKGKSFRNDLYAEYKSHRPPMPDDLRSQIEPIHQIIGAMGLPLLVIDGVEAD 115
>gi|325268321|ref|ZP_08134954.1| DNA-directed DNA polymerase I [Prevotella multiformis DSM 16608]
gi|324989463|gb|EGC21413.1| DNA-directed DNA polymerase I [Prevotella multiformis DSM 16608]
Length = 920
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G FRH +P YK R TP+ I Q + +K ++AM I +++ +
Sbjct: 62 GKTFRHEAFPDYKAQREETPEDIRQSVPIIKQILEAMHIPILQAD 106
>gi|343517783|ref|ZP_08754779.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Haemophilus pittmaniae HK 85]
gi|343394634|gb|EGV07181.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Haemophilus pittmaniae HK 85]
Length = 231
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN-VMYEDAYG 90
++ A G FR ++ YK++RPP PD + + +Q L I+A+ I ++ + V +D G
Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDIIRALGIPLLVIEGVEADDVIG 119
>gi|225075916|ref|ZP_03719115.1| hypothetical protein NEIFLAOT_00940 [Neisseria flavescens
NRL30031/H210]
gi|224952772|gb|EEG33981.1| hypothetical protein NEIFLAOT_00940 [Neisseria flavescens
NRL30031/H210]
Length = 937
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 30 VHD----LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV-NVM 84
VHD ++ A G NFRH ++ YK RPP PD + + L ++ M V+ + V
Sbjct: 53 VHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVE 112
Query: 85 YEDAYG 90
+D G
Sbjct: 113 ADDVIG 118
>gi|440733780|ref|ZP_20913458.1| exonuclease [Xanthomonas translucens DAR61454]
gi|440358854|gb|ELP96190.1| exonuclease [Xanthomonas translucens DAR61454]
Length = 307
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
FR+ LYP+YK NR P PD + + + KA A+ + V+
Sbjct: 72 FRNRLYPAYKANRAPAPDALRRQFAHCKALCAALGLGVL 110
>gi|424790146|ref|ZP_18216732.1| Exodeoxyribonuclease IX [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422798219|gb|EKU26353.1| Exodeoxyribonuclease IX [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 307
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
FR+ LYP+YK NR P PD + + + KA A+ + V+
Sbjct: 72 FRNRLYPAYKANRAPAPDALRRQFAHCKALCAALGLGVL 110
>gi|390939766|ref|YP_006403503.1| DNA polymerase I [Sulfurospirillum barnesii SES-3]
gi|390192873|gb|AFL67928.1| DNA polymerase I [Sulfurospirillum barnesii SES-3]
Length = 885
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 19 HDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK 77
HDT LD + G NFRH L PSYK NRP P+ + + L + I+ M K
Sbjct: 48 HDTDYMLFALD------SKGKNFRHDLDPSYKANRPEAPEDLKKQLPVAISWIEKMGFK 100
>gi|304440505|ref|ZP_07400392.1| DNA-directed DNA polymerase I [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304370983|gb|EFM24602.1| DNA-directed DNA polymerase I [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 882
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
G FRH LY YK R TP ++Q Y+ +K M+IK ++ V D
Sbjct: 61 GRTFRHELYKDYKGTRKKTPSELMQQWPYIMDILKLMNIKTLDSPVYEAD 110
>gi|227327116|ref|ZP_03831140.1| DNA polymerase I [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 929
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK +RPP P+ + + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHKMVKAMGLPLLAVSGVEAD 115
>gi|254427356|ref|ZP_05041063.1| DNA polymerase I superfamily [Alcanivorax sp. DG881]
gi|196193525|gb|EDX88484.1| DNA polymerase I superfamily [Alcanivorax sp. DG881]
Length = 921
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK-VIEVNVMYEDAYG 90
++ A G FR ++ YK+ RPP PD + + + L I+AM + +IE V +D G
Sbjct: 60 IFDAKGKTFRDEMFEEYKSQRPPMPDDLREQVTPLHDLIRAMGLPLIIEDGVEADDVIG 118
>gi|410629495|ref|ZP_11340195.1| DNA polymerase I [Glaciecola arctica BSs20135]
gi|410150980|dbj|GAC17062.1| DNA polymerase I [Glaciecola arctica BSs20135]
Length = 916
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR+ +Y YK NRPP PD + + L I+AM + ++ + + D
Sbjct: 66 VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPLHEIIEAMGLPLLVIEGVEAD 120
>gi|352107004|ref|ZP_08961725.1| DNA polymerase I [Halomonas sp. HAL1]
gi|350597455|gb|EHA13594.1| DNA polymerase I [Halomonas sp. HAL1]
Length = 929
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK +RPP PD + + L A +KA+ + ++ V + D
Sbjct: 58 VFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCVEGVEAD 112
>gi|410616005|ref|ZP_11327000.1| DNA polymerase I [Glaciecola polaris LMG 21857]
gi|410164320|dbj|GAC31138.1| DNA polymerase I [Glaciecola polaris LMG 21857]
Length = 876
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI-EVNVMYEDAYG 90
++ A G FR +Y YK NRP P+ + ++ L IKAM + +I E V +D G
Sbjct: 17 VFDAKGKTFRDEIYSEYKANRPSMPEELRSQIEPLHKIIKAMGLPIIVESGVEADDVIG 75
>gi|417087882|ref|ZP_11954701.1| DNA polymerase I [Escherichia coli cloneA_i1]
gi|355349370|gb|EHF98576.1| DNA polymerase I [Escherichia coli cloneA_i1]
Length = 928
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A +KA + ++ V+ + D
Sbjct: 61 VFDAKGETFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKARGLPLLAVSGVEAD 115
>gi|227113276|ref|ZP_03826932.1| DNA polymerase I [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 929
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ +YK +RPP P+ + + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHQMVKAMGLPLLAVSGVEAD 115
>gi|85060213|ref|YP_455915.1| DNA polymerase I [Sodalis glossinidius str. 'morsitans']
gi|84780733|dbj|BAE75510.1| DNA polymerase I [Sodalis glossinidius str. 'morsitans']
Length = 927
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + + L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRSQIAPLHDMVKAMGLPLLAVSGVEAD 115
>gi|340347219|ref|ZP_08670331.1| DNA-directed DNA polymerase I [Prevotella dentalis DSM 3688]
gi|433652418|ref|YP_007278797.1| DNA polymerase I [Prevotella dentalis DSM 3688]
gi|339609789|gb|EGQ14652.1| DNA-directed DNA polymerase I [Prevotella dentalis DSM 3688]
gi|433302951|gb|AGB28767.1| DNA polymerase I [Prevotella dentalis DSM 3688]
Length = 920
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G FRH +P+YK R TP+ I + +++ + AM I V++ N
Sbjct: 62 GKTFRHEAFPAYKAQRDETPEDIKLSVPFIQEILHAMHIPVLQAN 106
>gi|373460588|ref|ZP_09552339.1| DNA polymerase I [Prevotella maculosa OT 289]
gi|371955206|gb|EHO73010.1| DNA polymerase I [Prevotella maculosa OT 289]
Length = 920
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 38 GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN 82
G FRH +P+YK R TP+ I Q + +K ++A I +++ +
Sbjct: 62 GKTFRHEAFPAYKAQRQETPEDITQSVPIIKEILRAFHIPILQAD 106
>gi|337278920|ref|YP_004618391.1| DNA polymerase I [Ramlibacter tataouinensis TTB310]
gi|334729996|gb|AEG92372.1| Candidate DNA polymerase I [Ramlibacter tataouinensis TTB310]
Length = 954
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 23 MTDITLDVHDLYGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK 77
M + DV Y AC G FR LYP YK NR PD + ++ + ++ + K
Sbjct: 69 MQKLRRDVRADYAACVFDAPGKTFRDDLYPGYKANRSAMPDDLRAQIEPIHEVVRLLGWK 128
Query: 78 VIEV 81
V+ V
Sbjct: 129 VLNV 132
>gi|163748902|ref|ZP_02156154.1| DNA polymerase I [Shewanella benthica KT99]
gi|161331676|gb|EDQ02481.1| DNA polymerase I [Shewanella benthica KT99]
Length = 917
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR+ +Y YK RPP PD + ++ L I+AM + ++
Sbjct: 61 IFDAKGKTFRNDMYADYKAQRPPMPDDLRTQIEPLHRIIRAMGLPLV 107
>gi|384260298|ref|YP_005404232.1| DNA polymerase I [Rahnella aquatilis HX2]
gi|380756274|gb|AFE60665.1| DNA polymerase I [Rahnella aquatilis HX2]
Length = 934
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR ++ YK++RPP PD + ++ L +KAM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDEIFEQYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEAD 115
>gi|118602134|ref|YP_903349.1| DNA polymerase I [Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
gi|118567073|gb|ABL01878.1| DNA polymerase I [Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
Length = 906
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSI 76
++ A G NFRH +YP YK +R P +V ++ L I+AM +
Sbjct: 59 IFDAKGKNFRHDIYPQYKAHRKPADSELVVQIEPLYEIIRAMGL 102
>gi|89900119|ref|YP_522590.1| DNA polymerase I [Rhodoferax ferrireducens T118]
gi|89344856|gb|ABD69059.1| DNA polymerase I [Rhodoferax ferrireducens T118]
Length = 957
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 34 YGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
Y AC G FR LYP YK +R P PD + ++ + ++ M KV+ V
Sbjct: 67 YAACIFDDKGPTFRDALYPEYKAHRSPMPDDLRSQIEPIHEVVRLMGWKVLAV 119
>gi|386824733|ref|ZP_10111863.1| DNA polymerase I [Serratia plymuthica PRI-2C]
gi|386378410|gb|EIJ19217.1| DNA polymerase I [Serratia plymuthica PRI-2C]
Length = 933
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLL 107
>gi|327387327|gb|AEA72258.1| putative DNA polymerase I [uncultured bacterium]
Length = 729
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR ++ YK RPP PD + ++ L A I+AM + +I
Sbjct: 60 VFDAPGKTFRDEMFEEYKAQRPPMPDDLRAQIEPLYAIIRAMGLPLI 106
>gi|270265261|ref|ZP_06193523.1| DNA polymerase I [Serratia odorifera 4Rx13]
gi|270040895|gb|EFA13997.1| DNA polymerase I [Serratia odorifera 4Rx13]
Length = 933
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLL 107
>gi|210612532|ref|ZP_03289350.1| hypothetical protein CLONEX_01552 [Clostridium nexile DSM 1787]
gi|210151537|gb|EEA82544.1| hypothetical protein CLONEX_01552 [Clostridium nexile DSM 1787]
Length = 872
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 5 YGLLWRGFLSYNIRHDTYMTDITLDVHDLYGACGMNFRHTLYPSYKNNRPPTPDTIVQGL 64
YG L F Y+T + DVH FRH ++ YK R P D + Q +
Sbjct: 36 YGFLNIMFKILEEEKPEYLT-VAFDVH------APTFRHEMFAEYKGTRKPMADELRQQV 88
Query: 65 QYLKASIKAMSIKVIE 80
+K ++AM +K IE
Sbjct: 89 PVIKEVLQAMGVKTIE 104
>gi|456735300|gb|EMF60061.1| DNA polymerase I [Stenotrophomonas maltophilia EPM1]
Length = 924
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A G FR LY YK NRPP PD + ++ + ++A+ I ++ V
Sbjct: 58 APGKTFRDDLYDQYKANRPPMPDELRSQVEPMCRIVEALGISILRV 103
>gi|443691221|gb|ELT93135.1| hypothetical protein CAPTEDRAFT_43589, partial [Capitella teleta]
Length = 739
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G NFRH +Y YK R P PD + ++ + +KA+ ++ + + D
Sbjct: 26 IFDAKGKNFRHAMYSEYKATRKPMPDDLRSQIEPIHQIVKALGFPLLMIEGVEAD 80
>gi|421786277|ref|ZP_16222686.1| DNA-directed DNA polymerase I [Serratia plymuthica A30]
gi|407751623|gb|EKF61797.1| DNA-directed DNA polymerase I [Serratia plymuthica A30]
Length = 933
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLL 107
>gi|424670757|ref|ZP_18107780.1| DNA polymerase I [Stenotrophomonas maltophilia Ab55555]
gi|401070244|gb|EJP78761.1| DNA polymerase I [Stenotrophomonas maltophilia Ab55555]
Length = 924
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A G FR LY YK NRPP PD + ++ + ++A+ I ++ V
Sbjct: 58 APGKTFRDDLYDQYKANRPPMPDELRSQVEPMCRIVEALGISILRV 103
>gi|374623754|ref|ZP_09696256.1| DNA polymerase I [Ectothiorhodospira sp. PHS-1]
gi|373942857|gb|EHQ53402.1| DNA polymerase I [Ectothiorhodospira sp. PHS-1]
Length = 900
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
++ A G FR LY YK +RPP P+ + + L A ++AM I ++ V
Sbjct: 59 IFDAKGRTFRDDLYAEYKAHRPPMPEELSAQVAPLHALVQAMGIPMLVV 107
>gi|190576375|ref|YP_001974220.1| DNA polymerase I [Stenotrophomonas maltophilia K279a]
gi|190014297|emb|CAQ47944.1| putative DNA polymerase I [Stenotrophomonas maltophilia K279a]
Length = 924
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A G FR LY YK NRPP PD + ++ + ++A+ I ++ V
Sbjct: 58 APGKTFRDDLYDQYKANRPPMPDELRSQVEPMCRIVEALGISILRV 103
>gi|145589891|ref|YP_001156488.1| DNA polymerase I [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145048297|gb|ABP34924.1| DNA polymerase I [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 943
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR +Y YK +R P P+ +V+ ++ + A +KAM V+ V+ + D
Sbjct: 58 VFDAKGKTFRDEMYSEYKAHRSPMPEDLVKQIEPIHAMVKAMGWPVLMVSGVEAD 112
>gi|254469004|ref|ZP_05082410.1| DNA polymerase I [beta proteobacterium KB13]
gi|207087814|gb|EDZ65097.1| DNA polymerase I [beta proteobacterium KB13]
Length = 901
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVN-VMYEDAYG 90
++ A G FR+ +Y YK NRP P+ + ++ LK +I A+ I ++ + V +D G
Sbjct: 56 VFDAKGKTFRNDIYSDYKANRPHMPEDLAVQIEPLKKAIHALGISMLSIEGVEADDVIG 114
>gi|157373118|ref|YP_001481107.1| DNA polymerase I [Serratia proteamaculans 568]
gi|157324882|gb|ABV43979.1| DNA polymerase I [Serratia proteamaculans 568]
Length = 934
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++
Sbjct: 61 VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLL 107
>gi|429211046|ref|ZP_19202212.1| DNA polymerase I [Pseudomonas sp. M1]
gi|428158460|gb|EKX05007.1| DNA polymerase I [Pseudomonas sp. M1]
Length = 912
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ YK++RPP PD + ++ L A+++A+ + ++ V + D
Sbjct: 58 VFDAKGPTFRDELFAEYKSHRPPMPDELRVQIEPLHAAVRALGLPLLCVEGVEAD 112
>gi|387131167|ref|YP_006294057.1| DNA polymerase I [Methylophaga sp. JAM7]
gi|386272456|gb|AFJ03370.1| DNA polymerase I [Methylophaga sp. JAM7]
Length = 904
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FRH LY YK RPP PD + + + + + AM + ++ ++ + D
Sbjct: 60 VFDAKGKTFRHDLYSEYKATRPPMPDDLREQVTPIHDIVTAMGLPLLVIDGVEAD 114
>gi|359396295|ref|ZP_09189347.1| DNA polymerase I [Halomonas boliviensis LC1]
gi|357970560|gb|EHJ93007.1| DNA polymerase I [Halomonas boliviensis LC1]
Length = 894
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR +Y YK +RPP PD + + L A +KA+ + ++
Sbjct: 23 VFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLL 69
>gi|319789775|ref|YP_004151408.1| DNA polymerase I [Thermovibrio ammonificans HB-1]
gi|317114277|gb|ADU96767.1| DNA polymerase I [Thermovibrio ammonificans HB-1]
Length = 829
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 41 FRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
FR + YK NR PTPD L Y+K +K + +KV+E+
Sbjct: 64 FRSEISKDYKANRKPTPDDFKVQLPYIKEFLKCLGVKVLEL 104
>gi|422006555|ref|ZP_16353544.1| DNA polymerase I [Providencia rettgeri Dmel1]
gi|414098771|gb|EKT60416.1| DNA polymerase I [Providencia rettgeri Dmel1]
Length = 930
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ SYK++RPP PD + + L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFESYKSHRPPMPDDLRAQIAPLHEMVEAMGLPLLVVSGVEAD 115
>gi|389799363|ref|ZP_10202358.1| DNA polymerase I [Rhodanobacter sp. 116-2]
gi|388442780|gb|EIL98947.1| DNA polymerase I [Rhodanobacter sp. 116-2]
Length = 916
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A G FR LY YK NRPP PD + ++ + A + A+ ++ V
Sbjct: 58 APGPTFRDALYAQYKANRPPMPDDLRSQVEPMLAIVAALGFPILRV 103
>gi|352086477|ref|ZP_08953979.1| DNA polymerase I [Rhodanobacter sp. 2APBS1]
gi|351679442|gb|EHA62583.1| DNA polymerase I [Rhodanobacter sp. 2APBS1]
Length = 916
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 36 ACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 81
A G FR LY YK NRPP PD + ++ + A + A+ ++ V
Sbjct: 58 APGPTFRDALYAQYKANRPPMPDDLRSQVEPMLAIVAALGFPILRV 103
>gi|268592231|ref|ZP_06126452.1| DNA polymerase I [Providencia rettgeri DSM 1131]
gi|291312280|gb|EFE52733.1| DNA polymerase I [Providencia rettgeri DSM 1131]
Length = 930
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVIEVNVMYED 87
++ A G FR L+ SYK++RPP PD + + L ++AM + ++ V+ + D
Sbjct: 61 VFDAKGKTFRDELFESYKSHRPPMPDDLRAQIAPLHEMVEAMGLPLLVVSGVEAD 115
>gi|398808927|ref|ZP_10567783.1| DNA polymerase I [Variovorax sp. CF313]
gi|398086508|gb|EJL77122.1| DNA polymerase I [Variovorax sp. CF313]
Length = 938
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 23 MTDITLDVHDLYGAC-----GMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIK 77
MT + +V Y AC G FR YP YK NR P PD + + + +K +
Sbjct: 48 MTALRREVRADYAACIFDAPGKTFRDDWYPEYKANRSPMPDDLRSQIDPIHEVVKLLGWP 107
Query: 78 VIEV-NVMYEDAYG 90
V+ V +V +D G
Sbjct: 108 VLSVPDVEADDVIG 121
>gi|333929795|ref|YP_004503374.1| DNA polymerase I [Serratia sp. AS12]
gi|333934748|ref|YP_004508326.1| DNA polymerase I [Serratia plymuthica AS9]
gi|386331618|ref|YP_006027788.1| DNA polymerase I [Serratia sp. AS13]
gi|333476355|gb|AEF48065.1| DNA polymerase I [Serratia plymuthica AS9]
gi|333493855|gb|AEF53017.1| DNA polymerase I [Serratia sp. AS12]
gi|333963951|gb|AEG30724.1| DNA polymerase I [Serratia sp. AS13]
Length = 933
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 33 LYGACGMNFRHTLYPSYKNNRPPTPDTIVQGLQYLKASIKAMSIKVI 79
++ A G FR L+ YK++RPP PD + ++ L +KAM + ++
Sbjct: 61 VFDAKGKTFRDDLFAEYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLL 107
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.139 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,499,345,788
Number of Sequences: 23463169
Number of extensions: 52879640
Number of successful extensions: 93310
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1801
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 91448
Number of HSP's gapped (non-prelim): 1915
length of query: 90
length of database: 8,064,228,071
effective HSP length: 60
effective length of query: 30
effective length of database: 6,656,437,931
effective search space: 199693137930
effective search space used: 199693137930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)